[UP]
[1][TOP] >UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV Length = 1324 Score = 208 bits (529), Expect = 3e-52 Identities = 102/191 (53%), Positives = 136/191 (71%), Gaps = 2/191 (1%) Frame = +2 Query: 8 QPIVRNFGEEKQPLLNKSSSLKVGTFERFRAGNISIGRQLDNRVDAIEYELGRASTSRAG 187 QPIVR FG+EKQPLLNKS S++V TF FRAGNI IGRQ+DN +AI +ELGRASTS A Sbjct: 739 QPIVRTFGKEKQPLLNKSRSMRVKTFTSFRAGNIPIGRQIDNTAEAINFELGRASTSNA- 797 Query: 188 DFRSEIDGVERRLNTF--NLKSLGDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSRV 361 + RL+T NL++ G+FAF I P AV+ G VL+KID+F I S V Sbjct: 798 --------INPRLDTSETNLRAGGEFAFIHTIDLPTAVTEGQVLAKIDIFKKIQDAKSMV 849 Query: 362 CAEWLEMGYIDRNLCFISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHV 541 C +W++ GY+++NL FISHL+ F G A+W++FDA+G +P++V+T++ELE R LCPHV Sbjct: 850 CVQWMQAGYVNKNLTFISHLAPSQFCGVAIWYIFDAYGKIPSDVTTSLELEIARSLCPHV 909 Query: 542 QILKDSTTDMW 574 +L+DS T +W Sbjct: 910 HVLRDSKTSVW 920 [2][TOP] >UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO Length = 1344 Score = 201 bits (510), Expect = 4e-50 Identities = 100/193 (51%), Positives = 134/193 (69%), Gaps = 2/193 (1%) Frame = +2 Query: 5 TQPIVRNFGEEKQPLLNKSSSLKVGTFERFRAGNISIGRQLDNRVDAIEYELGRASTSRA 184 +QPIVR FGEEKQPLLNKS S++V TF FRAGNI +GR +DN +AI YELGRASTS Sbjct: 762 SQPIVRTFGEEKQPLLNKSRSMRVKTFSSFRAGNIPVGRHVDNATEAIRYELGRASTS-- 819 Query: 185 GDFRSEIDGVERRLNTF--NLKSLGDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSR 358 GV+ RL+ N+K+ GDFA I P + G++L+KIDL + I TN+R Sbjct: 820 --------GVQPRLDESCCNIKADGDFACGETIILPATSASGSILAKIDLISLIKNTNTR 871 Query: 359 VCAEWLEMGYIDRNLCFISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPH 538 VC+EWL GY+ +NL +SHL+ F G ++W++FDA+G +P ++STT+ELE + L PH Sbjct: 872 VCSEWLMDGYVSQNLRAVSHLAPNSFSGISIWYIFDAYGKIPADISTTIELEMAKCLSPH 931 Query: 539 VQILKDSTTDMWV 577 VQ L+D+TT W+ Sbjct: 932 VQTLRDATTSSWI 944 [3][TOP] >UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO Length = 1343 Score = 196 bits (499), Expect = 8e-49 Identities = 97/191 (50%), Positives = 132/191 (69%) Frame = +2 Query: 5 TQPIVRNFGEEKQPLLNKSSSLKVGTFERFRAGNISIGRQLDNRVDAIEYELGRASTSRA 184 +QP VR FGEEKQPLLNKS S++V TF FRAGNI +GR+LDN +AI YEL RASTS Sbjct: 762 SQPTVRTFGEEKQPLLNKSRSMRVKTFSSFRAGNIPVGRRLDNTTEAINYELARASTSN- 820 Query: 185 GDFRSEIDGVERRLNTFNLKSLGDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSRVC 364 + +D ++ NLK+ GDFA I P + G++L+KIDL + I TN+RVC Sbjct: 821 ---QPRLDE-----SSCNLKADGDFACGETITLPATSASGSILAKIDLISLIKNTNTRVC 872 Query: 365 AEWLEMGYIDRNLCFISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQ 544 +EWL GY+ +NL +SHL+ F G ++W++FDA+G +P ++STT+ELE + L PHVQ Sbjct: 873 SEWLMDGYVSQNLRAVSHLAPNSFSGISIWYIFDAYGKIPADISTTIELEMAKCLSPHVQ 932 Query: 545 ILKDSTTDMWV 577 L+D+TT W+ Sbjct: 933 TLRDATTSSWI 943 [4][TOP] >UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus RepID=Q6JX06_9SECO Length = 1350 Score = 190 bits (482), Expect = 8e-47 Identities = 95/192 (49%), Positives = 137/192 (71%), Gaps = 3/192 (1%) Frame = +2 Query: 8 QPIVRNF-GEEKQPLLNKSSSLKVGTFERFRAGNISIGRQLDNRVDAIEYELGRASTSRA 184 +P+VR F GE KQPL +KS S+++ +F FR G+I +GR++DN +AI+YELGRASTS Sbjct: 770 RPVVRTFTGEGKQPL-DKSRSMRIQSFAAFRGGSIPVGRRVDNTAEAIKYELGRASTSEL 828 Query: 185 G-DFRSEIDGVERRLNTFNLKSL-GDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSR 358 G + +D N++S GDF F I P AV+VGTVL+KID+ I T+S Sbjct: 829 GTSLKGRLD------EQSNIRSNDGDFVFVHTIDLPNAVTVGTVLAKIDILEKIKTTHSA 882 Query: 359 VCAEWLEMGYIDRNLCFISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPH 538 VCAEW++MGY+DRNL ISHL+ F G A+W+VFDA+GH+P++++TT+EL+ VR+L PH Sbjct: 883 VCAEWVQMGYMDRNLKLISHLAPSQFCGVAIWYVFDAYGHIPSDITTTIELDMVRNLSPH 942 Query: 539 VQILKDSTTDMW 574 + +L++ T+ +W Sbjct: 943 IHVLREPTSAVW 954 [5][TOP] >UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV Length = 1357 Score = 187 bits (474), Expect = 7e-46 Identities = 94/192 (48%), Positives = 127/192 (66%), Gaps = 1/192 (0%) Frame = +2 Query: 5 TQPIVRNF-GEEKQPLLNKSSSLKVGTFERFRAGNISIGRQLDNRVDAIEYELGRASTSR 181 TQPIVR F GE KQPLLNKS S+++ +F FR NI +GR++DN +AI YELGRASTS Sbjct: 765 TQPIVRTFTGEGKQPLLNKSRSMRIQSFVSFRGSNIPVGRRIDNTAEAINYELGRASTSS 824 Query: 182 AGDFRSEIDGVERRLNTFNLKSLGDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSRV 361 E + NLK+ G +AF I+ P V+ GTVL+ ++F I TN++V Sbjct: 825 VSSRLDE--------SKCNLKAGGSYAFGETIELPATVTPGTVLAVFNIFDKIQETNTKV 876 Query: 362 CAEWLEMGYIDRNLCFISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHV 541 C++WLE GY+ +NL ISHL+ F G A+W++FDA+G +P +V+TT ELE R PHV Sbjct: 877 CSKWLEQGYVSQNLTAISHLAPNAFSGIAIWYIFDAYGKIPGDVTTTFELEMARSFDPHV 936 Query: 542 QILKDSTTDMWV 577 Q+L+D +T WV Sbjct: 937 QVLRDVSTSTWV 948 [6][TOP] >UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus RepID=Q64959_9SECO Length = 510 Score = 166 bits (420), Expect = 1e-39 Identities = 73/109 (66%), Positives = 90/109 (82%) Frame = +2 Query: 251 GDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSRVCAEWLEMGYIDRNLCFISHLSAG 430 GDFAFS RI YP A +VGTV+ +D+FA IT TNSRVCAEWLE GY+DRN+ +SHL Sbjct: 2 GDFAFSQRITYPAARTVGTVIGTLDIFALITTTNSRVCAEWLERGYVDRNILMVSHLFTS 61 Query: 431 PFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDMWV 577 P+LG A+W+VFDA+GH+PT+V+TTVELES+RHL PHV ILKD+TT W+ Sbjct: 62 PYLGMAIWYVFDAYGHIPTDVTTTVELESIRHLSPHVHILKDNTTSTWI 110 [7][TOP] >UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=UPI0000163D16 Length = 514 Score = 128 bits (321), Expect = 4e-28 Identities = 54/108 (50%), Positives = 78/108 (72%) Frame = +2 Query: 251 GDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSRVCAEWLEMGYIDRNLCFISHLSAG 430 G+FAF I P AV+ G VL+KID+F I S VC +W++ GY+++NL FISHL+ Sbjct: 3 GEFAFIHTIDLPTAVTEGQVLAKIDIFKKIQDAKSMVCVQWMQAGYVNKNLTFISHLAPS 62 Query: 431 PFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDMW 574 F G A+W++FDA+G +P++V+T++ELE R LCPHV +L+DS T +W Sbjct: 63 QFCGVAIWYIFDAYGKIPSDVTTSLELEIARSLCPHVHVLRDSKTSVW 110 [8][TOP] >UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B Length = 511 Score = 120 bits (302), Expect = 6e-26 Identities = 52/109 (47%), Positives = 76/109 (69%) Frame = +2 Query: 251 GDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSRVCAEWLEMGYIDRNLCFISHLSAG 430 GDFA I P + G++L+KIDL + I TN+RVC+EWL GY+ +NL +SHL+ Sbjct: 3 GDFACGETITLPATSASGSILAKIDLISLIKNTNTRVCSEWLMDGYVSQNLRAVSHLAPN 62 Query: 431 PFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDMWV 577 F G ++W++FDA+G +P ++STT+ELE + L PHVQ L+D+TT W+ Sbjct: 63 SFSGISIWYIFDAYGKIPADISTTIELEMAKCLSPHVQTLRDATTSSWI 111 [9][TOP] >UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE Length = 520 Score = 119 bits (297), Expect = 2e-25 Identities = 52/109 (47%), Positives = 75/109 (68%) Frame = +2 Query: 251 GDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSRVCAEWLEMGYIDRNLCFISHLSAG 430 G +AF I+ P V+ GTVL+ ++F I TN++VC++WLE GY+ +NL ISHL+ Sbjct: 3 GSYAFGETIELPATVTPGTVLAVFNIFDKIQETNTKVCSKWLEQGYVSQNLTAISHLAPN 62 Query: 431 PFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDMWV 577 F G A+W++FDA+G +P +V+TT ELE R PHVQ+L+D +T WV Sbjct: 63 AFSGIAIWYIFDAYGKIPGDVTTTFELEMARSFDPHVQVLRDVSTSTWV 111 [10][TOP] >UniRef100_UPI0000163D15 84 kDa protein n=1 Tax=Grapevine chrome mosaic virus RepID=UPI0000163D15 Length = 810 Score = 88.6 bits (218), Expect = 3e-16 Identities = 43/59 (72%), Positives = 49/59 (83%) Frame = +2 Query: 8 QPIVRNFGEEKQPLLNKSSSLKVGTFERFRAGNISIGRQLDNRVDAIEYELGRASTSRA 184 QPIVR FG+EKQPLLNKS S++V TF FRAGNI IGRQ+DN +AI +ELGRASTS A Sbjct: 739 QPIVRTFGKEKQPLLNKSRSMRVKTFTSFRAGNIPIGRQIDNTAEAINFELGRASTSNA 797 [11][TOP] >UniRef100_UPI000016782A movement protein n=1 Tax=Tomato black ring virus RepID=UPI000016782A Length = 832 Score = 85.5 bits (210), Expect = 3e-15 Identities = 41/58 (70%), Positives = 47/58 (81%) Frame = +2 Query: 5 TQPIVRNFGEEKQPLLNKSSSLKVGTFERFRAGNISIGRQLDNRVDAIEYELGRASTS 178 +QP VR FGEEKQPLLNKS S++V TF FRAGNI +GR+LDN +AI YEL RASTS Sbjct: 762 SQPTVRTFGEEKQPLLNKSRSMRVKTFSSFRAGNIPVGRRLDNTTEAINYELARASTS 819 [12][TOP] >UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV Length = 1240 Score = 84.0 bits (206), Expect = 8e-15 Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 1/184 (0%) Frame = +2 Query: 8 QPIVRNFGEEK-QPLLNKSSSLKVGTFERFRAGNISIGRQLDNRVDAIEYELGRASTSRA 184 Q +VR F ++ P+L+K+ S++V TF FRAGNI + LG S + Sbjct: 618 QAVVRTFEDQDVAPILSKAKSMRVKTFGSFRAGNIPVNF------------LGTPSNGQV 665 Query: 185 GDFRSEIDGVERRLNTFNLKSLGDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSRVC 364 S + + ++KS +F F+ I P A + G VL+ +D+ A+ T S Sbjct: 666 ASKHSVSENAGYSVG--DMKSAENFVFTQLITVPAASTKGNVLAGVDILANARTTMSGFY 723 Query: 365 AEWLEMGYIDRNLCFISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQ 544 WL+ GYID NL I HL PF G + + + D G++ + T++ E + H+ Sbjct: 724 MRWLQKGYIDTNLKLICHLPRAPFAGMSFFVLIDGTGYLAKDAPTSLNEEEILSYPLHLV 783 Query: 545 ILKD 556 D Sbjct: 784 TTSD 787 [13][TOP] >UniRef100_UPI0000163DFD movement protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFD Length = 837 Score = 76.6 bits (187), Expect = 1e-12 Identities = 38/59 (64%), Positives = 46/59 (77%), Gaps = 1/59 (1%) Frame = +2 Query: 5 TQPIVRNF-GEEKQPLLNKSSSLKVGTFERFRAGNISIGRQLDNRVDAIEYELGRASTS 178 TQPIVR F GE KQPLLNKS S+++ +F FR NI +GR++DN +AI YELGRASTS Sbjct: 765 TQPIVRTFTGEGKQPLLNKSRSMRIQSFVSFRGSNIPVGRRIDNTAEAINYELGRASTS 823 [14][TOP] >UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus RepID=Q1T7B1_CNSV Length = 569 Score = 64.3 bits (155), Expect = 6e-09 Identities = 33/107 (30%), Positives = 54/107 (50%) Frame = +2 Query: 236 NLKSLGDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSRVCAEWLEMGYIDRNLCFIS 415 ++KS +F F+ I P A + G VL+ +D+ A+ T S WL+ GY+D NL I Sbjct: 10 DMKSAENFVFTQLITMPAASTKGNVLAGVDILANARTTMSGFYMRWLQKGYVDTNLKLIC 69 Query: 416 HLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKD 556 HL PF G + + + D G++ + T++ E + H+ D Sbjct: 70 HLPRAPFAGISFFVLIDGTGYLAKDAPTSLNEEEILSYPLHLVTTSD 116 [15][TOP] >UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus RepID=UPI0000164A26 Length = 564 Score = 61.6 bits (148), Expect = 4e-08 Identities = 33/104 (31%), Positives = 51/104 (49%) Frame = +2 Query: 245 SLGDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSRVCAEWLEMGYIDRNLCFISHLS 424 S +F F+ I P A + G VL+ +D+ A+ T S WL+ GYID NL I HL Sbjct: 1 SAENFVFTQLITVPAASTKGNVLAGVDILANARTTMSGFYMRWLQKGYIDTNLKLICHLP 60 Query: 425 AGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKD 556 PF G + + + D G++ + T++ E + H+ D Sbjct: 61 RAPFAGMSFFVLIDGTGYLAKDAPTSLNEEEILSYPLHLVTTSD 104