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[1][TOP] >UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot virus RepID=Q6XPY1_9SECO Length = 330 Score = 210 bits (535), Expect = 6e-53 Identities = 104/193 (53%), Positives = 132/193 (68%), Gaps = 1/193 (0%) Frame = +1 Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180 GT A T PL+ A K V+ S +YSYA G+LSHFLGVGG + F V TSS FVS +LR+ Sbjct: 21 GTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLRV 80 Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360 +WG T+ Q QMPH D+ G + LKIQSPFY+TAN G A FWV P+SSPMAPE Sbjct: 81 ALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEA 140 Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRPEGTDKEFQMFVPSRVSNLVMKG 537 +ES E+YI+I GI++ LC+ INY+Q FGWF +VR T+KE + +PSR++N+ K Sbjct: 141 IESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKE 200 Query: 538 VECTNFVNAFAIM 576 E N VNAF+IM Sbjct: 201 AEVINHVNAFSIM 213 [2][TOP] >UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus RepID=Q6JX06_9SECO Length = 1350 Score = 210 bits (535), Expect = 6e-53 Identities = 104/193 (53%), Positives = 132/193 (68%), Gaps = 1/193 (0%) Frame = +1 Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180 GT A T PL+ A K V+ S +YSYA G+LSHFLGVGG + F V TSS FVS +LR+ Sbjct: 1041 GTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLRV 1100 Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360 +WG T+ Q QMPH D+ G + LKIQSPFY+TAN G A FWV P+SSPMAPE Sbjct: 1101 ALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEA 1160 Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRPEGTDKEFQMFVPSRVSNLVMKG 537 +ES E+YI+I GI++ LC+ INY+Q FGWF +VR T+KE + +PSR++N+ K Sbjct: 1161 IESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKE 1220 Query: 538 VECTNFVNAFAIM 576 E N VNAF+IM Sbjct: 1221 AEVINHVNAFSIM 1233 [3][TOP] >UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=UPI0000163D16 Length = 514 Score = 209 bits (532), Expect = 1e-52 Identities = 103/195 (52%), Positives = 133/195 (68%), Gaps = 3/195 (1%) Frame = +1 Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180 G + PL+ A + ++SG YSYA G+LSHFLG+GGT+ F + TSS FV+ +LR+ Sbjct: 197 GNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLRV 256 Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360 +WG T T+ Q QMPH D LKIQSPFY+TANFG GA+FWV P+SSPMAPE Sbjct: 257 ALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPET 316 Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRPEG--TDKEFQMFVPSRVSNLVM 531 +ESK E+YI+I GID+ P +C+QINY QRF WF ++RP K ++ +PSRV N+ Sbjct: 317 MESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAY 376 Query: 532 KGVECTNFVNAFAIM 576 K TN+VNAFAIM Sbjct: 377 KEATVTNYVNAFAIM 391 [4][TOP] >UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV Length = 1324 Score = 209 bits (532), Expect = 1e-52 Identities = 103/195 (52%), Positives = 133/195 (68%), Gaps = 3/195 (1%) Frame = +1 Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180 G + PL+ A + ++SG YSYA G+LSHFLG+GGT+ F + TSS FV+ +LR+ Sbjct: 1007 GNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLRV 1066 Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360 +WG T T+ Q QMPH D LKIQSPFY+TANFG GA+FWV P+SSPMAPE Sbjct: 1067 ALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPET 1126 Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRPEG--TDKEFQMFVPSRVSNLVM 531 +ESK E+YI+I GID+ P +C+QINY QRF WF ++RP K ++ +PSRV N+ Sbjct: 1127 MESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAY 1186 Query: 532 KGVECTNFVNAFAIM 576 K TN+VNAFAIM Sbjct: 1187 KEATVTNYVNAFAIM 1201 [5][TOP] >UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO Length = 1344 Score = 204 bits (519), Expect = 4e-51 Identities = 94/194 (48%), Positives = 134/194 (69%), Gaps = 2/194 (1%) Frame = +1 Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180 GT+ T +P++LA + + + + YSYA G+LSHFLGVGG + FSVHST+S FVSC LR+ Sbjct: 1029 GTYTMTKVPVSLAMRVDSAAKRQAYSYAAGVLSHFLGVGGDIIFSVHSTASTFVSCSLRV 1088 Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360 +WGT PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE Sbjct: 1089 ALWGTIPTTEELAQIPHVDVTLDAKATLQIQSPFFATANFGDDGTAFYIATLCAPLAPET 1148 Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMK 534 +E+ F++YI IHGI+++ LC++INY Q F WFM+ T + +P+R++NL K Sbjct: 1149 METGFQYYIHIHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARMANLTSK 1208 Query: 535 GVECTNFVNAFAIM 576 V+ TNFVNA AIM Sbjct: 1209 EVQVTNFVNALAIM 1222 [6][TOP] >UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus RepID=Q64959_9SECO Length = 510 Score = 204 bits (519), Expect = 4e-51 Identities = 101/193 (52%), Positives = 134/193 (69%), Gaps = 1/193 (0%) Frame = +1 Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180 GT A T PL+ AEKS+T++ ETYSY+ G+LSHFLG+GG +RF VHSTSS ++ KLR+ Sbjct: 196 GTTATTNFPLSFAEKSITSTKRETYSYSAGLLSHFLGIGGKLRFRVHSTSSCLLTSKLRV 255 Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360 +W + + + H + G IQ+ +TANFG GA+FW++PLS+P AP+ Sbjct: 256 FLWEHSQPQCRRPKF-HTLTLMGLDWRAVIQAACCATANFGDSGARFWIMPLSAPRAPQT 314 Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRP-EGTDKEFQMFVPSRVSNLVMKG 537 VE+KFEFYIRI GID PDLC+QINY+QRFGWFM+ P + T E +PSR+ N+ +K Sbjct: 315 VETKFEFYIRILGIDVIPDLCRQINYKQRFGWFMISPSDKTTTELDFKIPSRIGNIGVKN 374 Query: 538 VECTNFVNAFAIM 576 +C NF NAFAIM Sbjct: 375 TKCVNFTNAFAIM 387 [7][TOP] >UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE Length = 520 Score = 204 bits (518), Expect = 5e-51 Identities = 101/194 (52%), Positives = 133/194 (68%), Gaps = 2/194 (1%) Frame = +1 Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180 GT+A P++LA K +TSG YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLRI Sbjct: 196 GTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLRI 255 Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360 +WGT P Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE Sbjct: 256 ALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPET 315 Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDK--EFQMFVPSRVSNLVMK 534 VE+ E+YI+I GI++ P LC++INY+QRF W ++ K ++ +PSR+ NL K Sbjct: 316 VETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSK 375 Query: 535 GVECTNFVNAFAIM 576 V+ TNFVNA AI+ Sbjct: 376 HVKVTNFVNALAIL 389 [8][TOP] >UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV Length = 1357 Score = 204 bits (518), Expect = 5e-51 Identities = 101/194 (52%), Positives = 133/194 (68%), Gaps = 2/194 (1%) Frame = +1 Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180 GT+A P++LA K +TSG YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLRI Sbjct: 1033 GTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLRI 1092 Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360 +WGT P Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE Sbjct: 1093 ALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPET 1152 Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDK--EFQMFVPSRVSNLVMK 534 VE+ E+YI+I GI++ P LC++INY+QRF W ++ K ++ +PSR+ NL K Sbjct: 1153 VETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSK 1212 Query: 535 GVECTNFVNAFAIM 576 V+ TNFVNA AI+ Sbjct: 1213 HVKVTNFVNALAIL 1226 [9][TOP] >UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B Length = 511 Score = 202 bits (514), Expect = 2e-50 Identities = 96/194 (49%), Positives = 133/194 (68%), Gaps = 2/194 (1%) Frame = +1 Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180 GT+ T +P++LA + + + + YSYA GILSHFLGVGG + FSVHST+S FVSC LRI Sbjct: 196 GTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLRI 255 Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360 +WGT PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE Sbjct: 256 ALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPET 315 Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMK 534 +E+ F++YI IHGI + +LC++INY Q F WFM+ T + +P+R++NL K Sbjct: 316 METGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSK 375 Query: 535 GVECTNFVNAFAIM 576 V+ TNFVNA AIM Sbjct: 376 EVQITNFVNALAIM 389 [10][TOP] >UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO Length = 1343 Score = 202 bits (514), Expect = 2e-50 Identities = 96/194 (49%), Positives = 133/194 (68%), Gaps = 2/194 (1%) Frame = +1 Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180 GT+ T +P++LA + + + + YSYA GILSHFLGVGG + FSVHST+S FVSC LRI Sbjct: 1028 GTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLRI 1087 Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360 +WGT PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE Sbjct: 1088 ALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPET 1147 Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMK 534 +E+ F++YI IHGI + +LC++INY Q F WFM+ T + +P+R++NL K Sbjct: 1148 METGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSK 1207 Query: 535 GVECTNFVNAFAIM 576 V+ TNFVNA AIM Sbjct: 1208 EVQITNFVNALAIM 1221 [11][TOP] >UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus RepID=Q1T7B1_CNSV Length = 569 Score = 108 bits (269), Expect = 4e-22 Identities = 58/192 (30%), Positives = 97/192 (50%) Frame = +1 Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180 G T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ KL I Sbjct: 209 GERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASKLHI 267 Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360 +W + H D G + +L I+ FY+++ +G GA + L SPM+P Sbjct: 268 SMWSKEQHVQHQAMNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPNA 327 Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGV 540 +++ F+ +I G +C+ IN+ QRFGWF V P + ++ + ++L + + Sbjct: 328 IKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDM 387 Query: 541 ECTNFVNAFAIM 576 + T + NAF M Sbjct: 388 KVTGYTNAFLQM 399 [12][TOP] >UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus RepID=UPI0000164A26 Length = 564 Score = 106 bits (265), Expect = 1e-21 Identities = 59/192 (30%), Positives = 97/192 (50%) Frame = +1 Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180 G T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ + RI Sbjct: 197 GERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSRI 255 Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360 +W I H D G + +L I+ FY+++ +G GA V L SPM+P Sbjct: 256 SMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNA 315 Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGV 540 +++ F+ +I G +C+ IN+ QRFGWF V P + ++ + ++L + + Sbjct: 316 IKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDM 375 Query: 541 ECTNFVNAFAIM 576 + T + NAF M Sbjct: 376 KVTGYTNAFLQM 387 [13][TOP] >UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV Length = 1240 Score = 106 bits (265), Expect = 1e-21 Identities = 59/192 (30%), Positives = 97/192 (50%) Frame = +1 Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180 G T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ + RI Sbjct: 880 GERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSRI 938 Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360 +W I H D G + +L I+ FY+++ +G GA V L SPM+P Sbjct: 939 SMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNA 998 Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGV 540 +++ F+ +I G +C+ IN+ QRFGWF V P + ++ + ++L + + Sbjct: 999 IKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDM 1058 Query: 541 ECTNFVNAFAIM 576 + T + NAF M Sbjct: 1059 KVTGYTNAFLQM 1070 [14][TOP] >UniRef100_Q65624 Polyprotein (Fragment) n=1 Tax=Blueberry leaf mottle virus RepID=Q65624_9SECO Length = 557 Score = 59.7 bits (143), Expect = 2e-07 Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 5/176 (2%) Frame = +1 Query: 58 SGIET-YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIW--GTTPTIAQTGQMP 228 SG T YS+ VGG + +V T SK +SC++ +I+ T + Q ++P Sbjct: 258 SGTNTFYSFPAAYTQLLQSVGGILHGTVVQTGSKAISCEMFLILQPDKTAHNLEQALRLP 317 Query: 229 HCDIVEGGSG-ELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGID 405 C I GG ++IQ+PF F + G Q + + PM + + + +++ + I Sbjct: 318 GCRIPTGGGPFSIRIQTPFQREQIFNT-GVQLVIYAVGGPMGAQAISAPYQYMVHFSHIQ 376 Query: 406 SQPD-LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFA 570 + D + I F W + FQ +P+R+S+LV+ G T NA A Sbjct: 377 EEGDPPPRPIGNVLLFNWATISEMTNLTRFQ--IPARLSDLVLPGQTVTMRRNALA 430 [15][TOP] >UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV Length = 515 Score = 57.0 bits (136), Expect = 1e-06 Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 2/108 (1%) Frame = +1 Query: 76 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 249 SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH + Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289 Query: 250 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 393 G E+ I++ +S A + ++PLS P+AP+ +EF + I Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337 [16][TOP] >UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV Length = 515 Score = 56.6 bits (135), Expect = 1e-06 Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 6/163 (3%) Frame = +1 Query: 79 YAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEGG 252 Y+ ++S LG GT+ SV S SS F + I W PT+ Q PH + G Sbjct: 231 YSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGDG 290 Query: 253 SGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PDL 420 E+ I++ F+S A + ++PLS P+AP+ +EF + I+ DSQ P + Sbjct: 291 QFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVHPPM 350 Query: 421 CKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECT 549 F ++P+ +P + + K T Sbjct: 351 FSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVT 393 [17][TOP] >UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV Length = 515 Score = 55.8 bits (133), Expect = 2e-06 Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 7/165 (4%) Frame = +1 Query: 76 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 249 SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH + Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWECEAPPTLRQVLWGPHQIMHGD 289 Query: 250 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQPDLC 423 G E+ I++ +S A + ++PLS P+AP+ +EF + I+ DSQ Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVH-P 348 Query: 424 KQINYRQRFGWFM---VRPEGTDKEFQMFVPSRVSNLVMKGVECT 549 + + + WF ++P+ +P + + K T Sbjct: 349 PMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVT 393 [18][TOP] >UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862 Length = 513 Score = 55.1 bits (131), Expect = 4e-06 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%) Frame = +1 Query: 76 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 249 SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH + Sbjct: 228 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 287 Query: 250 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 393 G E+ I++ +S A + ++PLS P+AP+ +EF + I Sbjct: 288 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 335 [19][TOP] >UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV Length = 1101 Score = 55.1 bits (131), Expect = 4e-06 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%) Frame = +1 Query: 76 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 249 SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH + Sbjct: 816 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 875 Query: 250 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 393 G E+ I++ +S A + ++PLS P+AP+ +EF + I Sbjct: 876 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 923 [20][TOP] >UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus RepID=Q5L492_TRSV Length = 515 Score = 54.3 bits (129), Expect = 7e-06 Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 2/108 (1%) Frame = +1 Query: 76 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 249 SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH + Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289 Query: 250 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 393 G E+ ++ +S++ + ++PLS P+AP+ +EF + I Sbjct: 290 GQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337 [21][TOP] >UniRef100_A2ID55 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus RepID=A2ID55_9SECO Length = 784 Score = 54.3 bits (129), Expect = 7e-06 Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 6/184 (3%) Frame = +1 Query: 4 THAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRII 183 T A+T L A ++G E + I+S + G GT + + V C L I Sbjct: 465 TRASTLLGFQFARLLTYSTGNEIPHFKQAIMSFYHGAAGTYHGEIIKVGTAQVQCDLLIY 524 Query: 184 IWGT-TP--TIAQTGQMPHCDIVEGGSGELKIQSPF-YSTANFGSEGAQFWVIPLSSPMA 351 + + TP Q + PH +++GG GE ++ P + A+F S G ++ + P A Sbjct: 525 MSNSRTPKTNYYQIYREPHF-LLKGGEGEFALRIPAPEAIASFHSGGVFLHIVVAAGPTA 583 Query: 352 PEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRP--EGTDKEFQMFVPSRVSNL 525 P+ V + FEF + IDS + + + F W + +GT + +PSR + + Sbjct: 584 PDGVAAPFEFMVNSKRIDSAGYVPRVMYQTMEFSWVTLSAFLQGT---ATILLPSRPATI 640 Query: 526 VMKG 537 G Sbjct: 641 TRFG 644