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[1][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 210 bits (535), Expect = 6e-53
Identities = 104/193 (53%), Positives = 132/193 (68%), Gaps = 1/193 (0%)
Frame = +1
Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180
GT A T PL+ A K V+ S +YSYA G+LSHFLGVGG + F V TSS FVS +LR+
Sbjct: 21 GTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLRV 80
Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360
+WG T+ Q QMPH D+ G + LKIQSPFY+TAN G A FWV P+SSPMAPE
Sbjct: 81 ALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEA 140
Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRPEGTDKEFQMFVPSRVSNLVMKG 537
+ES E+YI+I GI++ LC+ INY+Q FGWF +VR T+KE + +PSR++N+ K
Sbjct: 141 IESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKE 200
Query: 538 VECTNFVNAFAIM 576
E N VNAF+IM
Sbjct: 201 AEVINHVNAFSIM 213
[2][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 210 bits (535), Expect = 6e-53
Identities = 104/193 (53%), Positives = 132/193 (68%), Gaps = 1/193 (0%)
Frame = +1
Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180
GT A T PL+ A K V+ S +YSYA G+LSHFLGVGG + F V TSS FVS +LR+
Sbjct: 1041 GTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLRV 1100
Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360
+WG T+ Q QMPH D+ G + LKIQSPFY+TAN G A FWV P+SSPMAPE
Sbjct: 1101 ALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEA 1160
Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRPEGTDKEFQMFVPSRVSNLVMKG 537
+ES E+YI+I GI++ LC+ INY+Q FGWF +VR T+KE + +PSR++N+ K
Sbjct: 1161 IESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKE 1220
Query: 538 VECTNFVNAFAIM 576
E N VNAF+IM
Sbjct: 1221 AEVINHVNAFSIM 1233
[3][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 209 bits (532), Expect = 1e-52
Identities = 103/195 (52%), Positives = 133/195 (68%), Gaps = 3/195 (1%)
Frame = +1
Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180
G + PL+ A + ++SG YSYA G+LSHFLG+GGT+ F + TSS FV+ +LR+
Sbjct: 197 GNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLRV 256
Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360
+WG T T+ Q QMPH D LKIQSPFY+TANFG GA+FWV P+SSPMAPE
Sbjct: 257 ALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPET 316
Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRPEG--TDKEFQMFVPSRVSNLVM 531
+ESK E+YI+I GID+ P +C+QINY QRF WF ++RP K ++ +PSRV N+
Sbjct: 317 MESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAY 376
Query: 532 KGVECTNFVNAFAIM 576
K TN+VNAFAIM
Sbjct: 377 KEATVTNYVNAFAIM 391
[4][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 209 bits (532), Expect = 1e-52
Identities = 103/195 (52%), Positives = 133/195 (68%), Gaps = 3/195 (1%)
Frame = +1
Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180
G + PL+ A + ++SG YSYA G+LSHFLG+GGT+ F + TSS FV+ +LR+
Sbjct: 1007 GNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLRV 1066
Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360
+WG T T+ Q QMPH D LKIQSPFY+TANFG GA+FWV P+SSPMAPE
Sbjct: 1067 ALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPET 1126
Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRPEG--TDKEFQMFVPSRVSNLVM 531
+ESK E+YI+I GID+ P +C+QINY QRF WF ++RP K ++ +PSRV N+
Sbjct: 1127 MESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAY 1186
Query: 532 KGVECTNFVNAFAIM 576
K TN+VNAFAIM
Sbjct: 1187 KEATVTNYVNAFAIM 1201
[5][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 204 bits (519), Expect = 4e-51
Identities = 94/194 (48%), Positives = 134/194 (69%), Gaps = 2/194 (1%)
Frame = +1
Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180
GT+ T +P++LA + + + + YSYA G+LSHFLGVGG + FSVHST+S FVSC LR+
Sbjct: 1029 GTYTMTKVPVSLAMRVDSAAKRQAYSYAAGVLSHFLGVGGDIIFSVHSTASTFVSCSLRV 1088
Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360
+WGT PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE
Sbjct: 1089 ALWGTIPTTEELAQIPHVDVTLDAKATLQIQSPFFATANFGDDGTAFYIATLCAPLAPET 1148
Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMK 534
+E+ F++YI IHGI+++ LC++INY Q F WFM+ T + +P+R++NL K
Sbjct: 1149 METGFQYYIHIHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARMANLTSK 1208
Query: 535 GVECTNFVNAFAIM 576
V+ TNFVNA AIM
Sbjct: 1209 EVQVTNFVNALAIM 1222
[6][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 204 bits (519), Expect = 4e-51
Identities = 101/193 (52%), Positives = 134/193 (69%), Gaps = 1/193 (0%)
Frame = +1
Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180
GT A T PL+ AEKS+T++ ETYSY+ G+LSHFLG+GG +RF VHSTSS ++ KLR+
Sbjct: 196 GTTATTNFPLSFAEKSITSTKRETYSYSAGLLSHFLGIGGKLRFRVHSTSSCLLTSKLRV 255
Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360
+W + + + H + G IQ+ +TANFG GA+FW++PLS+P AP+
Sbjct: 256 FLWEHSQPQCRRPKF-HTLTLMGLDWRAVIQAACCATANFGDSGARFWIMPLSAPRAPQT 314
Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRP-EGTDKEFQMFVPSRVSNLVMKG 537
VE+KFEFYIRI GID PDLC+QINY+QRFGWFM+ P + T E +PSR+ N+ +K
Sbjct: 315 VETKFEFYIRILGIDVIPDLCRQINYKQRFGWFMISPSDKTTTELDFKIPSRIGNIGVKN 374
Query: 538 VECTNFVNAFAIM 576
+C NF NAFAIM
Sbjct: 375 TKCVNFTNAFAIM 387
[7][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 204 bits (518), Expect = 5e-51
Identities = 101/194 (52%), Positives = 133/194 (68%), Gaps = 2/194 (1%)
Frame = +1
Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180
GT+A P++LA K +TSG YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLRI
Sbjct: 196 GTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLRI 255
Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360
+WGT P Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE
Sbjct: 256 ALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPET 315
Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDK--EFQMFVPSRVSNLVMK 534
VE+ E+YI+I GI++ P LC++INY+QRF W ++ K ++ +PSR+ NL K
Sbjct: 316 VETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSK 375
Query: 535 GVECTNFVNAFAIM 576
V+ TNFVNA AI+
Sbjct: 376 HVKVTNFVNALAIL 389
[8][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 204 bits (518), Expect = 5e-51
Identities = 101/194 (52%), Positives = 133/194 (68%), Gaps = 2/194 (1%)
Frame = +1
Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180
GT+A P++LA K +TSG YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLRI
Sbjct: 1033 GTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLRI 1092
Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360
+WGT P Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE
Sbjct: 1093 ALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPET 1152
Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDK--EFQMFVPSRVSNLVMK 534
VE+ E+YI+I GI++ P LC++INY+QRF W ++ K ++ +PSR+ NL K
Sbjct: 1153 VETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSK 1212
Query: 535 GVECTNFVNAFAIM 576
V+ TNFVNA AI+
Sbjct: 1213 HVKVTNFVNALAIL 1226
[9][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 202 bits (514), Expect = 2e-50
Identities = 96/194 (49%), Positives = 133/194 (68%), Gaps = 2/194 (1%)
Frame = +1
Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180
GT+ T +P++LA + + + + YSYA GILSHFLGVGG + FSVHST+S FVSC LRI
Sbjct: 196 GTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLRI 255
Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360
+WGT PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE
Sbjct: 256 ALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPET 315
Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMK 534
+E+ F++YI IHGI + +LC++INY Q F WFM+ T + +P+R++NL K
Sbjct: 316 METGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSK 375
Query: 535 GVECTNFVNAFAIM 576
V+ TNFVNA AIM
Sbjct: 376 EVQITNFVNALAIM 389
[10][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 202 bits (514), Expect = 2e-50
Identities = 96/194 (49%), Positives = 133/194 (68%), Gaps = 2/194 (1%)
Frame = +1
Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180
GT+ T +P++LA + + + + YSYA GILSHFLGVGG + FSVHST+S FVSC LRI
Sbjct: 1028 GTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLRI 1087
Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360
+WGT PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE
Sbjct: 1088 ALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPET 1147
Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMK 534
+E+ F++YI IHGI + +LC++INY Q F WFM+ T + +P+R++NL K
Sbjct: 1148 METGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSK 1207
Query: 535 GVECTNFVNAFAIM 576
V+ TNFVNA AIM
Sbjct: 1208 EVQITNFVNALAIM 1221
[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 108 bits (269), Expect = 4e-22
Identities = 58/192 (30%), Positives = 97/192 (50%)
Frame = +1
Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180
G T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ KL I
Sbjct: 209 GERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASKLHI 267
Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360
+W + H D G + +L I+ FY+++ +G GA + L SPM+P
Sbjct: 268 SMWSKEQHVQHQAMNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPNA 327
Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGV 540
+++ F+ +I G +C+ IN+ QRFGWF V P + ++ + ++L + +
Sbjct: 328 IKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDM 387
Query: 541 ECTNFVNAFAIM 576
+ T + NAF M
Sbjct: 388 KVTGYTNAFLQM 399
[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 106 bits (265), Expect = 1e-21
Identities = 59/192 (30%), Positives = 97/192 (50%)
Frame = +1
Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180
G T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ + RI
Sbjct: 197 GERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSRI 255
Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360
+W I H D G + +L I+ FY+++ +G GA V L SPM+P
Sbjct: 256 SMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNA 315
Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGV 540
+++ F+ +I G +C+ IN+ QRFGWF V P + ++ + ++L + +
Sbjct: 316 IKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDM 375
Query: 541 ECTNFVNAFAIM 576
+ T + NAF M
Sbjct: 376 KVTGYTNAFLQM 387
[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 106 bits (265), Expect = 1e-21
Identities = 59/192 (30%), Positives = 97/192 (50%)
Frame = +1
Query: 1 GTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRI 180
G T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ + RI
Sbjct: 880 GERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSRI 938
Query: 181 IIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEK 360
+W I H D G + +L I+ FY+++ +G GA V L SPM+P
Sbjct: 939 SMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNA 998
Query: 361 VESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGV 540
+++ F+ +I G +C+ IN+ QRFGWF V P + ++ + ++L + +
Sbjct: 999 IKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDM 1058
Query: 541 ECTNFVNAFAIM 576
+ T + NAF M
Sbjct: 1059 KVTGYTNAFLQM 1070
[14][TOP]
>UniRef100_Q65624 Polyprotein (Fragment) n=1 Tax=Blueberry leaf mottle virus
RepID=Q65624_9SECO
Length = 557
Score = 59.7 bits (143), Expect = 2e-07
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
Frame = +1
Query: 58 SGIET-YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIW--GTTPTIAQTGQMP 228
SG T YS+ VGG + +V T SK +SC++ +I+ T + Q ++P
Sbjct: 258 SGTNTFYSFPAAYTQLLQSVGGILHGTVVQTGSKAISCEMFLILQPDKTAHNLEQALRLP 317
Query: 229 HCDIVEGGSG-ELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGID 405
C I GG ++IQ+PF F + G Q + + PM + + + +++ + I
Sbjct: 318 GCRIPTGGGPFSIRIQTPFQREQIFNT-GVQLVIYAVGGPMGAQAISAPYQYMVHFSHIQ 376
Query: 406 SQPD-LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFA 570
+ D + I F W + FQ +P+R+S+LV+ G T NA A
Sbjct: 377 EEGDPPPRPIGNVLLFNWATISEMTNLTRFQ--IPARLSDLVLPGQTVTMRRNALA 430
[15][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
Length = 515
Score = 57.0 bits (136), Expect = 1e-06
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +1
Query: 76 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 249
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 250 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 393
G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337
[16][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
Length = 515
Score = 56.6 bits (135), Expect = 1e-06
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 6/163 (3%)
Frame = +1
Query: 79 YAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEGG 252
Y+ ++S LG GT+ SV S SS F + I W PT+ Q PH + G
Sbjct: 231 YSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGDG 290
Query: 253 SGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PDL 420
E+ I++ F+S A + ++PLS P+AP+ +EF + I+ DSQ P +
Sbjct: 291 QFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVHPPM 350
Query: 421 CKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECT 549
F ++P+ +P + + K T
Sbjct: 351 FSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVT 393
[17][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
Length = 515
Score = 55.8 bits (133), Expect = 2e-06
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 7/165 (4%)
Frame = +1
Query: 76 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 249
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWECEAPPTLRQVLWGPHQIMHGD 289
Query: 250 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQPDLC 423
G E+ I++ +S A + ++PLS P+AP+ +EF + I+ DSQ
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVH-P 348
Query: 424 KQINYRQRFGWFM---VRPEGTDKEFQMFVPSRVSNLVMKGVECT 549
+ + + WF ++P+ +P + + K T
Sbjct: 349 PMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVT 393
[18][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
Length = 513
Score = 55.1 bits (131), Expect = 4e-06
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +1
Query: 76 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 249
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 228 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 287
Query: 250 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 393
G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 288 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 335
[19][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
Length = 1101
Score = 55.1 bits (131), Expect = 4e-06
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +1
Query: 76 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 249
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 816 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 875
Query: 250 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 393
G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 876 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 923
[20][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
RepID=Q5L492_TRSV
Length = 515
Score = 54.3 bits (129), Expect = 7e-06
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +1
Query: 76 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 249
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 250 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 393
G E+ ++ +S++ + ++PLS P+AP+ +EF + I
Sbjct: 290 GQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337
[21][TOP]
>UniRef100_A2ID55 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
RepID=A2ID55_9SECO
Length = 784
Score = 54.3 bits (129), Expect = 7e-06
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 6/184 (3%)
Frame = +1
Query: 4 THAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRII 183
T A+T L A ++G E + I+S + G GT + + V C L I
Sbjct: 465 TRASTLLGFQFARLLTYSTGNEIPHFKQAIMSFYHGAAGTYHGEIIKVGTAQVQCDLLIY 524
Query: 184 IWGT-TP--TIAQTGQMPHCDIVEGGSGELKIQSPF-YSTANFGSEGAQFWVIPLSSPMA 351
+ + TP Q + PH +++GG GE ++ P + A+F S G ++ + P A
Sbjct: 525 MSNSRTPKTNYYQIYREPHF-LLKGGEGEFALRIPAPEAIASFHSGGVFLHIVVAAGPTA 583
Query: 352 PEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRP--EGTDKEFQMFVPSRVSNL 525
P+ V + FEF + IDS + + + F W + +GT + +PSR + +
Sbjct: 584 PDGVAAPFEFMVNSKRIDSAGYVPRVMYQTMEFSWVTLSAFLQGT---ATILLPSRPATI 640
Query: 526 VMKG 537
G
Sbjct: 641 TRFG 644