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[1][TOP] >UniRef100_UPI000155CB1A PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide B n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155CB1A Length = 1113 Score = 275 bits (703), Expect = 2e-72 Identities = 129/176 (73%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +GKF GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 933 VLDGKFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 992 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 993 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1052 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1053 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1108 [2][TOP] >UniRef100_UPI00005EAC23 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide B n=1 Tax=Monodelphis domestica RepID=UPI00005EAC23 Length = 1133 Score = 275 bits (703), Expect = 2e-72 Identities = 129/176 (73%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +GKF GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 953 VLDGKFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1012 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 1013 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1072 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1073 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1128 [3][TOP] >UniRef100_UPI00017B31AA UPI00017B31AA related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B31AA Length = 1153 Score = 275 bits (702), Expect = 2e-72 Identities = 127/176 (72%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 977 VLDGRFHYGTAFGGSKVKDVCEDLIRHGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKL 1036 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 1037 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1096 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1097 DAFEVDVCGQCGLLGYSGWCHYCKSSCQVSSLRIPYACKLLFQELQSMNIIPRLKL 1152 [4][TOP] >UniRef100_UPI00017B31A9 UPI00017B31A9 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B31A9 Length = 1132 Score = 275 bits (702), Expect = 2e-72 Identities = 127/176 (72%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 952 VLDGRFHYGTAFGGSKVKDVCEDLIRHGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKL 1011 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 1012 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1071 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1072 DAFEVDVCGQCGLLGYSGWCHYCKSSCQVSSLRIPYACKLLFQELQSMNIIPRLKL 1127 [5][TOP] >UniRef100_UPI00016E4F58 UPI00016E4F58 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E4F58 Length = 1118 Score = 274 bits (701), Expect = 3e-72 Identities = 127/176 (72%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 938 VLDGRFHYGTAFGGSKVKDVCEDLIRHGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKL 997 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 998 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1057 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1058 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1113 [6][TOP] >UniRef100_UPI00016E4F57 UPI00016E4F57 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E4F57 Length = 1132 Score = 274 bits (701), Expect = 3e-72 Identities = 127/176 (72%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 952 VLDGRFHYGTAFGGSKVKDVCEDLIRHGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKL 1011 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 1012 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1071 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1072 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1127 [7][TOP] >UniRef100_UPI00005A223E PREDICTED: similar to DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide (RNA polymerase III subunit 2) (RPC2) n=1 Tax=Canis lupus familiaris RepID=UPI00005A223E Length = 1133 Score = 274 bits (701), Expect = 3e-72 Identities = 128/176 (72%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 953 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDFVTSGITGEPLEAYIYFGPVYYQKL 1012 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 1013 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1072 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1073 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1128 [8][TOP] >UniRef100_A2BG99 DNA-directed RNA polymerase n=1 Tax=Danio rerio RepID=A2BG99_DANRE Length = 1130 Score = 274 bits (701), Expect = 3e-72 Identities = 127/176 (72%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 950 VLDGRFHYGTAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKL 1009 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 1010 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1069 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1070 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1125 [9][TOP] >UniRef100_UPI0001560749 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit C2) (DNA-directed RNA polymerase III subunit B) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (C128) n=1 Tax=Equus caballus RepID=UPI0001560749 Length = 1133 Score = 274 bits (700), Expect = 4e-72 Identities = 128/176 (72%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 953 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1012 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 1013 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1072 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1073 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1128 [10][TOP] >UniRef100_UPI0000E23379 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide B isoform 2 n=1 Tax=Pan troglodytes RepID=UPI0000E23379 Length = 1133 Score = 274 bits (700), Expect = 4e-72 Identities = 128/176 (72%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 953 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1012 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 1013 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1072 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1073 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1128 [11][TOP] >UniRef100_UPI0000503D79 polymerase (RNA) III (DNA directed) polypeptide B n=2 Tax=Rattus norvegicus RepID=UPI0000503D79 Length = 1133 Score = 274 bits (700), Expect = 4e-72 Identities = 128/176 (72%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 953 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1012 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 1013 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1072 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1073 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1128 [12][TOP] >UniRef100_C0PUS9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Salmo salar RepID=C0PUS9_SALSA Length = 814 Score = 274 bits (700), Expect = 4e-72 Identities = 126/176 (71%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEP+ AY++ GP++YQKL Sbjct: 634 VMDGRFHYGTAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPIEAYIYFGPVYYQKL 693 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 694 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 753 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 754 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 809 [13][TOP] >UniRef100_Q5NVB0 Putative uncharacterized protein DKFZp469K1717 n=1 Tax=Pongo abelii RepID=Q5NVB0_PONAB Length = 1116 Score = 274 bits (700), Expect = 4e-72 Identities = 128/176 (72%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 936 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 995 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 996 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1055 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1056 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1111 [14][TOP] >UniRef100_B3KV73 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KV73_HUMAN Length = 1075 Score = 274 bits (700), Expect = 4e-72 Identities = 128/176 (72%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 895 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 954 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 955 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1014 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1015 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1070 [15][TOP] >UniRef100_B3KRQ8 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KRQ8_HUMAN Length = 838 Score = 274 bits (700), Expect = 4e-72 Identities = 128/176 (72%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 658 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 717 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 718 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 777 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 778 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 833 [16][TOP] >UniRef100_P59470 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Mus musculus RepID=RPC2_MOUSE Length = 1133 Score = 274 bits (700), Expect = 4e-72 Identities = 128/176 (72%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 953 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1012 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 1013 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1072 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1073 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1128 [17][TOP] >UniRef100_Q9NW08 DNA-directed RNA polymerase III subunit RPC2 n=2 Tax=Homo sapiens RepID=RPC2_HUMAN Length = 1133 Score = 274 bits (700), Expect = 4e-72 Identities = 128/176 (72%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 953 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1012 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 1013 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1072 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1073 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1128 [18][TOP] >UniRef100_UPI000194E18E PREDICTED: hypothetical protein n=1 Tax=Taeniopygia guttata RepID=UPI000194E18E Length = 1280 Score = 273 bits (699), Expect = 5e-72 Identities = 127/176 (72%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 1100 VLDGRFHYGTAFGGSKVKDVCEDLIRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1159 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 1160 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1219 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1220 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1275 [19][TOP] >UniRef100_UPI0000E7F911 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide B n=1 Tax=Gallus gallus RepID=UPI0000E7F911 Length = 1126 Score = 273 bits (699), Expect = 5e-72 Identities = 127/176 (72%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 946 VLDGRFHYGTAFGGSKVKDVCEDLIRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1005 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 1006 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1065 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1066 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1121 [20][TOP] >UniRef100_UPI0000ECD29F DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA polymerase III subunit C2) (DNA-directed RNA polymerase III subunit B) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (C128). n=1 Tax=Gallus gallus RepID=UPI0000ECD29F Length = 1132 Score = 273 bits (699), Expect = 5e-72 Identities = 127/176 (72%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 952 VLDGRFHYGTAFGGSKVKDVCEDLIRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1011 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 1012 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1071 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1072 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1127 [21][TOP] >UniRef100_C3YYC3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae RepID=C3YYC3_BRAFL Length = 1137 Score = 273 bits (697), Expect = 8e-72 Identities = 127/176 (72%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V EGKF GTAF G +++D E LV G++Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 957 VLEGKFHYGTAFGGSKVKDVCEELVQHGFNYQGKDYLTSGITGEPLNAYIYTGPVYYQKL 1016 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DK+HARA+GPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 1017 KHMVLDKIHARAKGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1076 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWCQYC++ VS+L++PYACKLLFQELQ MN+ PRLKL Sbjct: 1077 DQFEVDVCGECGLLGYSGWCQYCKSSRNVSSLKMPYACKLLFQELQSMNIAPRLKL 1132 [22][TOP] >UniRef100_B3KQY9 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KQY9_HUMAN Length = 523 Score = 273 bits (697), Expect = 8e-72 Identities = 127/176 (72%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 343 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 402 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGA+MLL+ERLM SS Sbjct: 403 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGANMLLLERLMISS 462 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 463 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 518 [23][TOP] >UniRef100_UPI000179EFE0 UPI000179EFE0 related cluster n=1 Tax=Bos taurus RepID=UPI000179EFE0 Length = 796 Score = 272 bits (696), Expect = 1e-71 Identities = 127/176 (72%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 616 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 675 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 676 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 735 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC +C++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 736 DAFEVDVCGQCGLLGYSGWCHFCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 791 [24][TOP] >UniRef100_UPI0000F339C2 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit C2) (DNA-directed RNA polymerase III subunit B) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (C128) n=1 Tax=Bos taurus RepID=UPI0000F339C2 Length = 1133 Score = 272 bits (696), Expect = 1e-71 Identities = 127/176 (72%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 953 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1012 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 1013 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1072 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC +C++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1073 DAFEVDVCGQCGLLGYSGWCHFCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1128 [25][TOP] >UniRef100_Q7Z3R8 DNA-directed RNA polymerase n=2 Tax=Homininae RepID=Q7Z3R8_HUMAN Length = 1133 Score = 272 bits (696), Expect = 1e-71 Identities = 127/176 (72%), Positives = 145/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E LV GY+Y GKD SG TGEP AY++ GP++YQKL Sbjct: 953 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPFEAYIYFGPVYYQKL 1012 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 1013 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1072 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1073 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1128 [26][TOP] >UniRef100_UPI00006A103B DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA polymerase III subunit C2) (DNA-directed RNA polymerase III subunit B) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (C128). n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A103B Length = 1122 Score = 272 bits (695), Expect = 1e-71 Identities = 126/176 (71%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 942 VLDGRFHYGTAFGGSKVKDVCEDLIRYGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1001 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 1002 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1061 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC +C++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1062 DAFEVDVCGKCGLLGYSGWCHFCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1117 [27][TOP] >UniRef100_UPI00004DA04E DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA polymerase III subunit C2) (DNA-directed RNA polymerase III subunit B) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (C128). n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00004DA04E Length = 1136 Score = 272 bits (695), Expect = 1e-71 Identities = 126/176 (71%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 956 VLDGRFHYGTAFGGSKVKDVCEDLIRYGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1015 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 1016 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1075 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC +C++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1076 DAFEVDVCGKCGLLGYSGWCHFCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1131 [28][TOP] >UniRef100_B2GUR3 DNA-directed RNA polymerase n=1 Tax=Xenopus (Silurana) tropicalis RepID=B2GUR3_XENTR Length = 1134 Score = 272 bits (695), Expect = 1e-71 Identities = 126/176 (71%), Positives = 146/176 (82%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 954 VLDGRFHYGTAFGGSKVKDVCEDLIRYGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1013 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 1014 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1073 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGLLGY GWC +C++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 1074 DAFEVDVCGKCGLLGYSGWCHFCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1129 [29][TOP] >UniRef100_UPI00015B53C8 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide B n=1 Tax=Nasonia vitripennis RepID=UPI00015B53C8 Length = 1127 Score = 271 bits (692), Expect = 3e-71 Identities = 125/176 (71%), Positives = 148/176 (84%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +GKF GTAF G ++ED E LV+ GY+Y GKD+FYSG TGEPL+AY+++GP++YQKL Sbjct: 947 VLKGKFHYGTAFGGSKVEDVCEELVSQGYNYLGKDIFYSGITGEPLQAYIYSGPVYYQKL 1006 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMHARARGPRA+LTRQPTEGRS+DGGLRLGEMERDCLIGYGASM+L+ERLM SS Sbjct: 1007 KHMVQDKMHARARGPRAVLTRQPTEGRSKDGGLRLGEMERDCLIGYGASMMLIERLMLSS 1066 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V C CGL+ Y G+C CR+ A VS + +PYACKLLFQELQ MN+VPRL L Sbjct: 1067 DAFDVDVCNKCGLMAYTGYCHSCRSSACVSTITMPYACKLLFQELQSMNIVPRLTL 1122 [30][TOP] >UniRef100_Q54IZ9 Ddi rpc2 intein n=1 Tax=Dictyostelium discoideum RepID=RPC2_DICDI Length = 1608 Score = 268 bits (685), Expect = 2e-70 Identities = 126/178 (70%), Positives = 144/178 (80%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V GKF GT F GDR+E+ ++ L++ G+SY GKD SG TGEPL ++F GPIFYQKL Sbjct: 1430 VLSGKFGFGTCFGGDRVENISKVLISKGFSYGGKDYVTSGVTGEPLACFIFFGPIFYQKL 1489 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGP LTRQPTEGR+R GGLRLGEMERDCLIGYGAS L+MERLM SS Sbjct: 1490 KHMVMDKMHARARGPTVTLTRQPTEGRARGGGLRLGEMERDCLIGYGASALIMERLMISS 1549 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D FTVYAC CG LGY+G+CQYC++ +S +QIPYACKLLFQELQ MN+VPRLKL D Sbjct: 1550 DRFTVYACKNCGFLGYEGYCQYCKSSVDISTIQIPYACKLLFQELQAMNIVPRLKLVD 1607 [31][TOP] >UniRef100_Q4S7G7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4S7G7_TETNG Length = 1171 Score = 266 bits (681), Expect = 6e-70 Identities = 127/186 (68%), Positives = 146/186 (78%), Gaps = 10/186 (5%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 981 VLDGRFHYGTAFGGSKVKDVCEDLIRHGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKL 1040 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 1041 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1100 Query: 362 DVFTVYACGTCGLLGYKGW----------CQYCRTGAAVSALQIPYACKLLFQELQGMNV 511 D F V CG CGLLGY GW C YC++ VS+L+IPYACKLLFQELQ MN+ Sbjct: 1101 DAFEVDVCGQCGLLGYSGWQVKLSHLDLECHYCKSSCQVSSLRIPYACKLLFQELQSMNI 1160 Query: 512 VPRLKL 529 +PRLKL Sbjct: 1161 IPRLKL 1166 [32][TOP] >UniRef100_UPI000180BF5A PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide B n=1 Tax=Ciona intestinalis RepID=UPI000180BF5A Length = 1141 Score = 265 bits (677), Expect = 2e-69 Identities = 123/173 (71%), Positives = 141/173 (81%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 GKF GTAF GD++ED ++ L GY+Y GKD SG TGE AY++ GP++YQKLKHM Sbjct: 964 GKFHYGTAFGGDKVEDLSQVLTDNGYNYVGKDCLTSGITGESFEAYIYQGPVYYQKLKHM 1023 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V DKMHARARGPRA+LTRQPTEGRS DGGLRLGEMERDCLIGYGASMLL+ERLM SSD F Sbjct: 1024 VLDKMHARARGPRAVLTRQPTEGRSHDGGLRLGEMERDCLIGYGASMLLLERLMISSDQF 1083 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 V CG CGLLGY GWCQ+C++ V+ L+IPYACKLLFQEL MN++PRLKL Sbjct: 1084 EVDVCGKCGLLGYDGWCQFCKSSKNVATLKIPYACKLLFQELTSMNIIPRLKL 1136 [33][TOP] >UniRef100_B3S5S8 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens RepID=B3S5S8_TRIAD Length = 1016 Score = 264 bits (675), Expect = 3e-69 Identities = 123/174 (70%), Positives = 140/174 (80%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 +GKFR GTAFDGD++ED + L+ YSY+GKD SG TGE L AY+F GP++YQ+LKH Sbjct: 838 DGKFRYGTAFDGDKLEDLCQTLIDYNYSYAGKDYLTSGITGEGLSAYIFFGPVYYQRLKH 897 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV DKMHARA+GPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG SMLL+ERLM SSD Sbjct: 898 MVLDKMHARAKGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGTSMLLVERLMISSDA 957 Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 F V C CGLL Y WC YC + VS+LQIPYACKLLFQELQ MN++PRL L Sbjct: 958 FEVDVCNNCGLLAYSKWCHYCHSSCHVSSLQIPYACKLLFQELQSMNIIPRLSL 1011 [34][TOP] >UniRef100_UPI0000E4965C PREDICTED: similar to RNA polymerase III subunit RPC2, partial n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4965C Length = 313 Score = 264 bits (674), Expect = 4e-69 Identities = 123/176 (69%), Positives = 143/176 (81%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V EGKF GTAF GD++ D E L G++Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 133 VLEGKFHYGTAFGGDKVVDICEDLRKHGFNYLGKDFLTSGITGEPLTAYIYFGPVYYQKL 192 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARA+GPRA+LTRQPTEGR+RDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 193 KHMVLDKMHARAKGPRAVLTRQPTEGRARDGGLRLGEMERDCLIGYGASMLLLERLMISS 252 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGL+G+ GWC YC +S+L+IPYACKLLFQELQ MN++PRL+L Sbjct: 253 DQFQVDVCGDCGLIGHSGWCPYCHCSQNISSLRIPYACKLLFQELQSMNIIPRLRL 308 [35][TOP] >UniRef100_UPI0000E487B4 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide B n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E487B4 Length = 830 Score = 264 bits (674), Expect = 4e-69 Identities = 123/176 (69%), Positives = 143/176 (81%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V EGKF GTAF GD++ D E L G++Y GKD SG TGEPL AY++ GP++YQKL Sbjct: 650 VLEGKFHYGTAFGGDKVVDICEDLRKHGFNYLGKDFLTSGITGEPLTAYIYFGPVYYQKL 709 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARA+GPRA+LTRQPTEGR+RDGGLRLGEMERDCLIGYGASMLL+ERLM SS Sbjct: 710 KHMVLDKMHARAKGPRAVLTRQPTEGRARDGGLRLGEMERDCLIGYGASMLLLERLMISS 769 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V CG CGL+G+ GWC YC +S+L+IPYACKLLFQELQ MN++PRL+L Sbjct: 770 DQFQVDVCGDCGLIGHSGWCPYCHCSQNISSLRIPYACKLLFQELQSMNIIPRLRL 825 [36][TOP] >UniRef100_UPI000051A146 PREDICTED: similar to DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide (RNA polymerase III subunit 2) (RPC2) isoform 1 n=1 Tax=Apis mellifera RepID=UPI000051A146 Length = 1134 Score = 261 bits (667), Expect = 3e-68 Identities = 118/176 (67%), Positives = 144/176 (81%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F GTAF G ++ED LV G++Y GKD FYSG TGEPL+AY+++GP++YQKL Sbjct: 954 VIKGEFHYGTAFGGSKVEDVCAELVKHGFNYLGKDFFYSGITGEPLQAYIYSGPVYYQKL 1013 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMHARARGPRA+LTRQPT GR+++GGLRLGEMERDCLIGYGASM+L+ERLM SS Sbjct: 1014 KHMVQDKMHARARGPRAVLTRQPTGGRAKEGGLRLGEMERDCLIGYGASMMLIERLMISS 1073 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F + C CGL+ Y GWC CR+ + VS + +PYACKLLFQELQ MN+VPRL L Sbjct: 1074 DAFDIDVCNKCGLMAYSGWCHSCRSSSCVSTISMPYACKLLFQELQSMNIVPRLTL 1129 [37][TOP] >UniRef100_A8NJT3 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NJT3_COPC7 Length = 1140 Score = 261 bits (667), Expect = 3e-68 Identities = 124/175 (70%), Positives = 140/175 (80%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 GK + GTAF G ++ED + L+ G+SY GKDM SG TGEPL AYV+ GPI+YQKLKHM Sbjct: 965 GKLQYGTAFGGSKVEDMSRILIEHGFSYGGKDMLTSGITGEPLEAYVYFGPIYYQKLKHM 1024 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V DKMHARARGPRA LTRQPTEGRSR+GGLRLGEMERDCLIGYGA+ LL+ERLM SSD F Sbjct: 1025 VMDKMHARARGPRATLTRQPTEGRSREGGLRLGEMERDCLIGYGATQLLLERLMISSDKF 1084 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 V AC CGL+GY GWC YC++ ++ L IPYA KLLFQEL MNVVPRL LDD Sbjct: 1085 EVGACQECGLMGYNGWCTYCKSSKKMATLTIPYAAKLLFQELMAMNVVPRLVLDD 1139 [38][TOP] >UniRef100_B0D7Q0 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D7Q0_LACBS Length = 1142 Score = 261 bits (666), Expect = 3e-68 Identities = 124/175 (70%), Positives = 141/175 (80%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 GK + GTAF G ++ED + L+ G+SY+GKDM SG TGEPL AYV+ GPI+YQKLKHM Sbjct: 967 GKLQYGTAFGGSKVEDMSRILIDHGFSYAGKDMLTSGITGEPLEAYVYFGPIYYQKLKHM 1026 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V DKMHARARGPRA LTRQPTEGRSR+GGLRLGEMERDCLIGYGA+ LL+ERLM SSD F Sbjct: 1027 VMDKMHARARGPRATLTRQPTEGRSREGGLRLGEMERDCLIGYGATQLLLERLMISSDKF 1086 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 V AC CGL+GY GWC YC++ ++ L IPYA KLLFQEL MNVVPRL LDD Sbjct: 1087 EVNACEECGLMGYNGWCTYCKSSKKMAQLTIPYAAKLLFQELMAMNVVPRLILDD 1141 [39][TOP] >UniRef100_Q7Q416 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae RepID=Q7Q416_ANOGA Length = 1089 Score = 259 bits (663), Expect = 7e-68 Identities = 120/178 (67%), Positives = 141/178 (79%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V EGKF GTAF G + D + L G++Y GKD+FYSG TGEPL Y+++GP++YQKL Sbjct: 911 VLEGKFHYGTAFGGSKCSDLQDELFNHGFNYLGKDVFYSGITGEPLEVYIYSGPVYYQKL 970 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMHARARGPRA+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SS Sbjct: 971 KHMVQDKMHARARGPRAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISS 1030 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C CG L Y WC CR+ A+VS + +PYACKLLFQEL MN+VPRLKL + Sbjct: 1031 DAFDVDVCNVCGRLAYSSWCHNCRSSASVSTISMPYACKLLFQELTSMNIVPRLKLQN 1088 [40][TOP] >UniRef100_A8P4S3 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide, putative n=1 Tax=Brugia malayi RepID=A8P4S3_BRUMA Length = 1104 Score = 258 bits (659), Expect = 2e-67 Identities = 121/176 (68%), Positives = 141/176 (80%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V GKF GTAF GD+++ E L A G++Y GKDM SG TG+ L AY++ GPI+YQKL Sbjct: 924 VLSGKFHYGTAFGGDQVDIVCEELAARGFNYLGKDMLTSGITGQQLSAYIYFGPIYYQKL 983 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGR+RDGGLRLGEMERDCLI YGASMLLMERLM SS Sbjct: 984 KHMVLDKMHARARGPRAVLTRQPTEGRARDGGLRLGEMERDCLIAYGASMLLMERLMVSS 1043 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V C CGL+GYK WCQ CR+ ++ ++IPYACKLLFQELQ MN+VP++ L Sbjct: 1044 DEFKVDVCSQCGLIGYKSWCQMCRSSRTMATIKIPYACKLLFQELQSMNIVPKISL 1099 [41][TOP] >UniRef100_Q27492 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis elegans RepID=Q27492_CAEEL Length = 1154 Score = 258 bits (658), Expect = 3e-67 Identities = 122/176 (69%), Positives = 142/176 (80%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G + GTAF GD+++D E L A GY+Y GKDM SG TG+PL AY++ GPI+YQKL Sbjct: 974 VVNGTYHYGTAFGGDQVKDVCEELAACGYNYMGKDMLTSGITGQPLSAYIYFGPIYYQKL 1033 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA LTRQPTEGRSR+GGLRLGEMERDCLI YGASMLL+ERLM SS Sbjct: 1034 KHMVLDKMHARARGPRAALTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLIERLMVSS 1093 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V C CG++G KGWCQ CR+ +++ ++IPYACKLLFQELQ MN+VPRL L Sbjct: 1094 DEFKVDVCTGCGVIGSKGWCQKCRSSKSMANIKIPYACKLLFQELQSMNIVPRLDL 1149 [42][TOP] >UniRef100_B6VBN7 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis brenneri RepID=B6VBN7_CAEBE Length = 1152 Score = 258 bits (658), Expect = 3e-67 Identities = 122/176 (69%), Positives = 142/176 (80%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G + GTAF GD+++D E L A GY+Y GKDM SG TG+PL AY++ GPI+YQKL Sbjct: 972 VMNGTYHYGTAFGGDQVKDVCEELAARGYNYMGKDMLTSGITGQPLSAYIYFGPIYYQKL 1031 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA LTRQPTEGRSR+GGLRLGEMERDCLI YGASMLL+ERLM SS Sbjct: 1032 KHMVLDKMHARARGPRAALTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLIERLMVSS 1091 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V C CG++G KGWCQ CR+ +++ ++IPYACKLLFQELQ MN+VPRL L Sbjct: 1092 DEFKVDVCTGCGVIGSKGWCQKCRSSKSMANIKIPYACKLLFQELQSMNIVPRLDL 1147 [43][TOP] >UniRef100_B7FVD4 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FVD4_PHATR Length = 1211 Score = 257 bits (657), Expect = 4e-67 Identities = 121/183 (66%), Positives = 146/183 (79%), Gaps = 5/183 (2%) Frame = +2 Query: 2 VHEGKFRMGTAF-----DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPI 166 ++EG+ +AF D + +EAL+ G +Y+GKD+ YSG+ GEPL AY+F+GP+ Sbjct: 1028 LYEGRQGYSSAFGEEFGSADTAQSASEALLRNGLNYTGKDILYSGTNGEPLDAYIFSGPV 1087 Query: 167 FYQKLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMER 346 FYQKLKHMV DK HARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S L+MER Sbjct: 1088 FYQKLKHMVLDKAHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGVSNLIMER 1147 Query: 347 LMHSSDVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526 LMHSSD F+ C TCGLL Y+GWCQYCR+G V+ +++PYACKLLFQELQ MNV+PRL+ Sbjct: 1148 LMHSSDAFSANVCLTCGLLQYEGWCQYCRSGEKVADIRLPYACKLLFQELQSMNVLPRLR 1207 Query: 527 LDD 535 L D Sbjct: 1208 LQD 1210 [44][TOP] >UniRef100_B4MR22 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni RepID=B4MR22_DROWI Length = 999 Score = 256 bits (655), Expect = 6e-67 Identities = 119/178 (66%), Positives = 142/178 (79%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V EGKF GTAF G +++D LV G++Y GKD FYSG TG PL AY+++GP++YQKL Sbjct: 821 VLEGKFHYGTAFGGSKVQDIQAELVRHGFNYMGKDFFYSGITGAPLEAYIYSGPVYYQKL 880 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SS Sbjct: 881 KHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISS 940 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C CG L Y WC +C++ A VS + +PYACKLLFQEL MNVVP+L L+D Sbjct: 941 DAFEVDVCRICGRLAYCSWCHFCQSSAHVSKISMPYACKLLFQELTSMNVVPKLILED 998 [45][TOP] >UniRef100_B8BQM2 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BQM2_THAPS Length = 1108 Score = 256 bits (653), Expect = 1e-66 Identities = 122/183 (66%), Positives = 144/183 (78%), Gaps = 5/183 (2%) Frame = +2 Query: 2 VHEGKFRMGTAF-----DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPI 166 V EG+ +AF D ++ AL+ G +Y+GKD+FYSG G PL AY+F+GP+ Sbjct: 925 VFEGRQAYASAFGEEFGSTDTVQSAELALIRNGLNYTGKDIFYSGVNGAPLDAYIFSGPV 984 Query: 167 FYQKLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMER 346 FYQKLKHMV DKMHAR+RGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YGAS L+MER Sbjct: 985 FYQKLKHMVLDKMHARSRGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGASNLIMER 1044 Query: 347 LMHSSDVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526 LMHSSD F+ C TCGLL Y+ WCQYCR+G VS +++PYACKLLFQELQ MNV+PRL+ Sbjct: 1045 LMHSSDAFSASVCMTCGLLQYQNWCQYCRSGEKVSDIRLPYACKLLFQELQAMNVLPRLR 1104 Query: 527 LDD 535 L D Sbjct: 1105 LKD 1107 [46][TOP] >UniRef100_B3MH37 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae RepID=B3MH37_DROAN Length = 1137 Score = 256 bits (653), Expect = 1e-66 Identities = 118/178 (66%), Positives = 142/178 (79%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V EGKF GTAF G +++D L G++Y GKD FYSG TG PL AY+++GP++YQKL Sbjct: 959 VLEGKFHYGTAFGGSKVQDIQAELERHGFNYMGKDFFYSGITGAPLEAYIYSGPVYYQKL 1018 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SS Sbjct: 1019 KHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISS 1078 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C TCG L Y WC +C++ A VS + +PYACKLLFQEL MNVVP++ L+D Sbjct: 1079 DAFEVDVCRTCGRLAYCSWCHFCQSSAYVSKISMPYACKLLFQELTSMNVVPKMILED 1136 [47][TOP] >UniRef100_C1FIF0 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299 RepID=C1FIF0_9CHLO Length = 1159 Score = 255 bits (652), Expect = 1e-66 Identities = 122/184 (66%), Positives = 142/184 (77%), Gaps = 6/184 (3%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 + +GKF+ GTAF GD + +E LV G+SY+GKD+ + G TGEPL AY+F GP++YQKL Sbjct: 975 LQDGKFKYGTAFGGDTVTSLSEVLVEHGFSYNGKDLMHCGITGEPLVAYIFMGPVYYQKL 1034 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPR +LTRQPTEGR+RDGGLRLGEMERDCLIGYGA+ML++ERLM SS Sbjct: 1035 KHMVLDKMHARARGPRVVLTRQPTEGRARDGGLRLGEMERDCLIGYGAAMLILERLMISS 1094 Query: 362 DVFTVYACGTCGLLGYK------GWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 D F C CGLLGYK CQ C G VSAL++PYACKLLFQELQ MN+ PRL Sbjct: 1095 DQFEAQVCTNCGLLGYKHHGTGRNLCQQCADGGTVSALKLPYACKLLFQELQSMNICPRL 1154 Query: 524 KLDD 535 L D Sbjct: 1155 TLSD 1158 [48][TOP] >UniRef100_B4LKV4 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis RepID=B4LKV4_DROVI Length = 1137 Score = 255 bits (651), Expect = 2e-66 Identities = 119/178 (66%), Positives = 142/178 (79%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V EGKF GTAF G + D LV G++Y GKD+FYSG TG PL AY+++GP++YQKL Sbjct: 959 VLEGKFHYGTAFGGSKAADVQAELVRHGFNYMGKDLFYSGITGAPLEAYIYSGPVYYQKL 1018 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SS Sbjct: 1019 KHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISS 1078 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C TCG L Y WC +C++ A VS + +PYACKLLFQEL MNVVP+L L++ Sbjct: 1079 DAFEVDVCRTCGRLAYCSWCHFCQSSAHVSKISMPYACKLLFQELTSMNVVPKLILEN 1136 [49][TOP] >UniRef100_Q28ZV6 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura pseudoobscura RepID=Q28ZV6_DROPS Length = 1137 Score = 254 bits (650), Expect = 2e-66 Identities = 118/178 (66%), Positives = 142/178 (79%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V EGKF GTAF G ++ D L G++Y GKD FYSG TG PL+AY+++GP++YQKL Sbjct: 959 VLEGKFHYGTAFGGSKVGDIQAELERHGFNYMGKDFFYSGITGAPLQAYIYSGPVYYQKL 1018 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SS Sbjct: 1019 KHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISS 1078 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C TCG L Y WC +C++ A VS + +PYACKLLFQEL MNVVP++ L+D Sbjct: 1079 DAFEVDVCRTCGRLAYCSWCHFCQSSAHVSKISMPYACKLLFQELTSMNVVPKMILED 1136 [50][TOP] >UniRef100_B4GGQ4 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis RepID=B4GGQ4_DROPE Length = 1137 Score = 254 bits (650), Expect = 2e-66 Identities = 118/178 (66%), Positives = 142/178 (79%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V EGKF GTAF G ++ D L G++Y GKD FYSG TG PL+AY+++GP++YQKL Sbjct: 959 VLEGKFHYGTAFGGSKVGDIQAELERHGFNYMGKDFFYSGITGAPLQAYIYSGPVYYQKL 1018 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SS Sbjct: 1019 KHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISS 1078 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C TCG L Y WC +C++ A VS + +PYACKLLFQEL MNVVP++ L+D Sbjct: 1079 DAFEVDVCRTCGRLAYCSWCHFCQSSAHVSKISMPYACKLLFQELTSMNVVPKMILED 1136 [51][TOP] >UniRef100_B4P5Q3 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba RepID=B4P5Q3_DROYA Length = 1137 Score = 254 bits (649), Expect = 3e-66 Identities = 117/176 (66%), Positives = 141/176 (80%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EGKF GTAF G ++ED L G++Y GKD FYSG TG PL AY+++GP++YQKLKH Sbjct: 961 EGKFHYGTAFGGSKVEDIQAELERHGFNYVGKDFFYSGITGTPLEAYIYSGPVYYQKLKH 1020 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SSD Sbjct: 1021 MVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISSDA 1080 Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 F V C TCG L Y WC +C++ A VS + +PYACKLLFQEL MNVVP++ L++ Sbjct: 1081 FEVDVCRTCGRLAYCSWCHFCQSSANVSKISMPYACKLLFQELTSMNVVPKMILEN 1136 [52][TOP] >UniRef100_B4KPU7 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis RepID=B4KPU7_DROMO Length = 1136 Score = 254 bits (649), Expect = 3e-66 Identities = 119/178 (66%), Positives = 141/178 (79%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V EGKF GTAF G + D LV G++Y GKD FYSG TG PL AY+++GP++YQKL Sbjct: 958 VLEGKFHYGTAFGGSKAADVQAELVRHGFNYMGKDFFYSGITGAPLEAYIYSGPVYYQKL 1017 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SS Sbjct: 1018 KHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISS 1077 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C TCG L Y WC +C++ A VS + +PYACKLLFQEL MNVVP+L L++ Sbjct: 1078 DAFEVDVCRTCGRLAYCSWCHFCQSSAHVSKISMPYACKLLFQELTSMNVVPKLILEN 1135 [53][TOP] >UniRef100_B3NS93 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta RepID=B3NS93_DROER Length = 1137 Score = 254 bits (649), Expect = 3e-66 Identities = 117/176 (66%), Positives = 141/176 (80%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EGKF GTAF G ++ED L G++Y GKD FYSG TG PL AY+++GP++YQKLKH Sbjct: 961 EGKFHYGTAFGGSKVEDIQAELERHGFNYVGKDFFYSGITGAPLEAYIYSGPVYYQKLKH 1020 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SSD Sbjct: 1021 MVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISSDA 1080 Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 F V C TCG L Y WC +C++ A VS + +PYACKLLFQEL MNVVP++ L++ Sbjct: 1081 FEVDVCRTCGRLAYCSWCHFCQSSANVSKISMPYACKLLFQELTSMNVVPKMILEN 1136 [54][TOP] >UniRef100_A9V2W9 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis RepID=A9V2W9_MONBE Length = 1097 Score = 254 bits (649), Expect = 3e-66 Identities = 118/176 (67%), Positives = 138/176 (78%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G + GTAF G I + L+ GY+Y GKD SG TGEPL +Y+F GP+FYQKL Sbjct: 917 VLNGNYNYGTAFGGTTIPEMCNTLLKHGYNYHGKDYLTSGITGEPLESYIFMGPVFYQKL 976 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHAR++GP LLTRQPTEGR+R+GGLRLGEMERDCLIG+G+SMLL+ERLM SS Sbjct: 977 KHMVMDKMHARSQGPMTLLTRQPTEGRAREGGLRLGEMERDCLIGHGSSMLLLERLMISS 1036 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D F V+AC CGLLG GWCQYC++ +S LQ+PYACKLLFQELQ MN+VPRL L Sbjct: 1037 DAFEVHACSQCGLLGSAGWCQYCKSSRGISKLQLPYACKLLFQELQSMNIVPRLTL 1092 [55][TOP] >UniRef100_B6JW67 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JW67_SCHJY Length = 1160 Score = 254 bits (649), Expect = 3e-66 Identities = 123/178 (69%), Positives = 135/178 (75%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GT F G R+ED + LV GY+YSGKDM SG TGE L AY+F GPI+YQKL Sbjct: 979 VLRGTLEYGTCFGGSRVEDMSRILVEHGYNYSGKDMLTSGITGEQLEAYIFFGPIYYQKL 1038 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YGAS LL+ERLM SS Sbjct: 1039 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGASQLLLERLMLSS 1098 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C CGLLGYKGWC C + V + IPYA KLLFQEL MN++PRL L+D Sbjct: 1099 DAFEVDVCENCGLLGYKGWCNSCESSKHVVKMTIPYAAKLLFQELMSMNIIPRLALED 1156 [56][TOP] >UniRef100_B4J5G6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi RepID=B4J5G6_DROGR Length = 1137 Score = 254 bits (648), Expect = 4e-66 Identities = 119/178 (66%), Positives = 141/178 (79%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V EGKF GTAF G + D LV G++Y GKD FYSG TG PL AY+++GP++YQKL Sbjct: 959 VLEGKFHYGTAFGGSKAADVQAELVRHGFNYMGKDFFYSGITGGPLEAYIYSGPVYYQKL 1018 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SS Sbjct: 1019 KHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISS 1078 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C TCG L Y WC +C++ A VS + +PYACKLLFQEL MNVVP+L L++ Sbjct: 1079 DAFEVDVCRTCGRLAYCSWCHFCQSSAHVSKISMPYACKLLFQELTSMNVVPKLILEN 1136 [57][TOP] >UniRef100_B4QC69 DNA-directed RNA polymerase n=2 Tax=melanogaster subgroup RepID=B4QC69_DROSI Length = 1137 Score = 254 bits (648), Expect = 4e-66 Identities = 116/176 (65%), Positives = 141/176 (80%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EGKF GTAF G ++ED L G++Y GKD FYSG TG PL AY+++GP++YQKLKH Sbjct: 961 EGKFHYGTAFGGSKVEDIQAELERHGFNYVGKDFFYSGITGSPLEAYIYSGPVYYQKLKH 1020 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SSD Sbjct: 1021 MVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISSDA 1080 Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 F V C TCG + Y WC +C++ A VS + +PYACKLLFQEL MNVVP++ L++ Sbjct: 1081 FEVDVCRTCGRMAYCSWCHFCQSSANVSKISMPYACKLLFQELTSMNVVPKMILEN 1136 [58][TOP] >UniRef100_Q6CEE6 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica RepID=Q6CEE6_YARLI Length = 1169 Score = 254 bits (648), Expect = 4e-66 Identities = 120/178 (67%), Positives = 141/178 (79%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G + GT F G ++ED ++ LV GYSYSGKDM YSG++GE L+AY+F GPI+YQKL Sbjct: 990 VLDGSLQYGTCFGGSKLEDMSKILVDHGYSYSGKDMLYSGTSGECLQAYIFFGPIYYQKL 1049 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHAR RGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM+SS Sbjct: 1050 KHMVMDKMHARPRGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMYSS 1109 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F C CGLLGY+GWC C+T A V + +PYA KLLFQEL MN+ PRLKL + Sbjct: 1110 DAFEADVCQKCGLLGYQGWCNSCQTTAHVVKMTLPYAAKLLFQELVSMNIAPRLKLKE 1167 [59][TOP] >UniRef100_C5DY85 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732 RepID=C5DY85_ZYGRC Length = 1143 Score = 254 bits (648), Expect = 4e-66 Identities = 119/178 (66%), Positives = 139/178 (78%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GT F G ++ED ++ LV G++YSGKDM YSG TGE L+AY+F GPI+YQKL Sbjct: 962 VMNGSLEYGTCFGGSKLEDMSQILVDNGFNYSGKDMLYSGVTGECLQAYIFFGPIYYQKL 1021 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS Sbjct: 1022 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMTSS 1081 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C CGL+GY GWC CR+ ++ + IPYA KLLFQEL MN+ PRL+L+D Sbjct: 1082 DAFEVEVCEKCGLMGYSGWCTTCRSAEHINKMSIPYAAKLLFQELLSMNIAPRLRLED 1139 [60][TOP] >UniRef100_UPI000151B156 DNA-directed RNA polymerase III 130 kDa polypeptide n=1 Tax=Pichia guilliermondii ATCC 6260 RepID=UPI000151B156 Length = 1156 Score = 253 bits (647), Expect = 5e-66 Identities = 121/178 (67%), Positives = 137/178 (76%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GT F G ++ED +E LV G++YSGKDM YSG TGE L+AY+F GPI+YQKL Sbjct: 977 VLNGSLEYGTCFGGSKLEDMSEILVKNGFNYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1036 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS Sbjct: 1037 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMLSS 1096 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C CGL+GY WC C++ V + IPYA KLLFQEL MN+ PRLKLDD Sbjct: 1097 DAFEVDVCNNCGLMGYNSWCTSCKSSENVIKMTIPYAAKLLFQELLSMNIAPRLKLDD 1154 [61][TOP] >UniRef100_A5DLE5 DNA-directed RNA polymerase n=1 Tax=Pichia guilliermondii RepID=A5DLE5_PICGU Length = 1156 Score = 253 bits (647), Expect = 5e-66 Identities = 121/178 (67%), Positives = 137/178 (76%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GT F G ++ED +E LV G++YSGKDM YSG TGE L+AY+F GPI+YQKL Sbjct: 977 VLNGSLEYGTCFGGSKLEDMSEILVKNGFNYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1036 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS Sbjct: 1037 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMLSS 1096 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C CGL+GY WC C++ V + IPYA KLLFQEL MN+ PRLKLDD Sbjct: 1097 DAFEVDVCNNCGLMGYNSWCTSCKSSENVIKMTIPYAAKLLFQELLSMNIAPRLKLDD 1154 [62][TOP] >UniRef100_P25167 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Drosophila melanogaster RepID=RPC2_DROME Length = 1137 Score = 253 bits (647), Expect = 5e-66 Identities = 116/176 (65%), Positives = 141/176 (80%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EGKF GTAF G ++ED L G++Y GKD FYSG TG PL AY+++GP++YQKLKH Sbjct: 961 EGKFHYGTAFGGSKVEDIQAELERHGFNYVGKDFFYSGITGTPLEAYIYSGPVYYQKLKH 1020 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SSD Sbjct: 1021 MVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISSDA 1080 Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 F V C TCG + Y WC +C++ A VS + +PYACKLLFQEL MNVVP++ L++ Sbjct: 1081 FEVDVCRTCGRMAYCSWCHFCQSSANVSKISMPYACKLLFQELTSMNVVPKMILEN 1136 [63][TOP] >UniRef100_Q10233 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Schizosaccharomyces pombe RepID=RPC2_SCHPO Length = 1165 Score = 253 bits (646), Expect = 7e-66 Identities = 123/178 (69%), Positives = 136/178 (76%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GT F G ++ED + LV GY+YSGKDM SG TGE L AY+F GPI+YQKL Sbjct: 984 VLRGTLEYGTCFGGTKVEDASRILVEHGYNYSGKDMLTSGITGETLEAYIFMGPIYYQKL 1043 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YGAS LL+ERLM SS Sbjct: 1044 KHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGASQLLLERLMISS 1103 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D V CG CGLLGYKGWC C++ V + IPYA KLLFQEL MN+VPRL L+D Sbjct: 1104 DACDVDVCGQCGLLGYKGWCNSCQSTREVVKMTIPYAAKLLFQELLSMNIVPRLALED 1161 [64][TOP] >UniRef100_B7Q0E7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis RepID=B7Q0E7_IXOSC Length = 1141 Score = 253 bits (645), Expect = 9e-66 Identities = 117/176 (66%), Positives = 140/176 (79%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V GKF GTAF G +++D E L+ G++Y GKD SG TGEPL AY++ GPI+YQKL Sbjct: 961 VLNGKFHYGTAFGGSKVQDVGEELIRRGFNYRGKDCLTSGITGEPLSAYIYFGPIYYQKL 1020 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DK+HARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIG+GAS+LL+ERLM SS Sbjct: 1021 KHMVMDKVHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGHGASLLLLERLMLSS 1080 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 D V C CGLLGY WC +CR+ +++L++PYACKLLFQEL MN++PRL L Sbjct: 1081 DACQVDVCRGCGLLGYSRWCHFCRSSRTMASLRVPYACKLLFQELLSMNIIPRLDL 1136 [65][TOP] >UniRef100_UPI0000D56081 PREDICTED: similar to RNA polymerase III 128kD subunit CG8344-PA n=1 Tax=Tribolium castaneum RepID=UPI0000D56081 Length = 1122 Score = 251 bits (642), Expect = 2e-65 Identities = 116/175 (66%), Positives = 137/175 (78%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EGKF GTAF G ++ D E L G++Y GKD FYSG TGEPL AY+++GP++YQKLKH Sbjct: 944 EGKFHYGTAFGGSKVNDVCEELAKHGFNYQGKDFFYSGITGEPLEAYIYSGPVYYQKLKH 1003 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV+DK+HAR RGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASM+L+ERLM SSD Sbjct: 1004 MVQDKIHARGRGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMMLIERLMVSSDQ 1063 Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 V C CG LGY GWC C++ VS++ +PYACKLL ELQ MN+ RL L+ Sbjct: 1064 CEVDVCNLCGRLGYCGWCNSCKSSREVSSITMPYACKLLLTELQAMNITARLTLN 1118 [66][TOP] >UniRef100_Q6FLJ9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata RepID=Q6FLJ9_CANGA Length = 1133 Score = 251 bits (642), Expect = 2e-65 Identities = 118/178 (66%), Positives = 138/178 (77%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GT F G ++ED ++ LV G++YSGKDM YSG TGE L+AY+F GPI+YQKL Sbjct: 952 VLNGSLEYGTCFGGSKLEDMSKILVDQGFNYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1011 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS Sbjct: 1012 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISS 1071 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C CGL+GY GWC C++ + + IPYA KLLFQEL MN+ PRL+L+D Sbjct: 1072 DAFEVDVCSNCGLMGYSGWCSTCKSAEHIIKMTIPYAAKLLFQELLAMNIAPRLRLED 1129 [67][TOP] >UniRef100_C4M3E3 DNA-directed RNA polymerase n=1 Tax=Entamoeba histolytica HM-1:IMSS RepID=C4M3E3_ENTHI Length = 1122 Score = 251 bits (641), Expect = 3e-65 Identities = 113/174 (64%), Positives = 142/174 (81%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 +G F+ GTAF GD+++D ++ L+ AGYSY GK+ YSG TG+ L AY+F GP++YQKLKH Sbjct: 946 DGSFKYGTAFGGDKLDDMSKILIEAGYSYDGKEELYSGITGKALHAYIFIGPVYYQKLKH 1005 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV DKMHARARGP++ LTRQPTEGRSRDGGLRLGEMERDCLIGYGA+ LL+ERLM+SSD Sbjct: 1006 MVLDKMHARARGPKSSLTRQPTEGRSRDGGLRLGEMERDCLIGYGATNLLLERLMYSSDA 1065 Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 F V C CGL+G+ G+C++C + + + +PYACKLLFQE+Q MNVVPRL + Sbjct: 1066 FKVCVCKKCGLIGHSGYCKFCESSLYCTNVTMPYACKLLFQEMQSMNVVPRLSI 1119 [68][TOP] >UniRef100_Q6CLR1 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis RepID=Q6CLR1_KLULA Length = 1142 Score = 251 bits (641), Expect = 3e-65 Identities = 121/178 (67%), Positives = 137/178 (76%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GT F G ++ED ++ LV G++YSGKDM YSG TGE L+AY+F GPI+YQKL Sbjct: 961 VLNGTLEYGTCFGGSKLEDMSKILVDNGFNYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1020 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS Sbjct: 1021 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMLSS 1080 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C CGL+GY GWC C+T V + IPYA KLLFQEL MN+ PRLKL D Sbjct: 1081 DAFEVDVCEKCGLMGYSGWCTSCKTAEHVVKMTIPYAAKLLFQELLAMNIAPRLKLGD 1138 [69][TOP] >UniRef100_P22276 DNA-directed RNA polymerase III subunit RPC2 n=5 Tax=Saccharomyces cerevisiae RepID=RPC2_YEAST Length = 1149 Score = 250 bits (638), Expect = 6e-65 Identities = 118/178 (66%), Positives = 138/178 (77%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GT F G ++ED ++ LV G++YSGKDM YSG TGE L+AY+F GPI+YQKL Sbjct: 968 VLNGTLEYGTCFGGSKLEDMSKILVDQGFNYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1027 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS Sbjct: 1028 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISS 1087 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C CGL+GY GWC C++ + + IPYA KLLFQEL MN+ PRL+L+D Sbjct: 1088 DAFEVDVCDKCGLMGYSGWCTTCKSAENIIKMTIPYAAKLLFQELLSMNIAPRLRLED 1145 [70][TOP] >UniRef100_C5DEU3 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DEU3_LACTC Length = 1144 Score = 249 bits (636), Expect = 1e-64 Identities = 119/178 (66%), Positives = 137/178 (76%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GT F G ++E+ ++ LV G++YSGKDM YSG TGE L+AY+F GPI+YQKL Sbjct: 963 VLNGSLEYGTCFGGSKLENMSQILVNHGFNYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1022 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS Sbjct: 1023 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISS 1082 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C CGL+GY GWC C+ V + IPYA KLLFQEL MN+ PRLKL+D Sbjct: 1083 DAFEVDVCNKCGLMGYSGWCTSCKGAENVIKMTIPYAAKLLFQELLSMNIAPRLKLED 1140 [71][TOP] >UniRef100_B9WLY1 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36 RepID=B9WLY1_CANDC Length = 1157 Score = 249 bits (636), Expect = 1e-64 Identities = 119/178 (66%), Positives = 136/178 (76%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GT F G ++ED ++ LV G+SYSGKDM YSG TGE L+AY+F GPI+YQKL Sbjct: 978 VLNGSLEYGTCFGGSKLEDMSKILVEKGFSYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1037 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS Sbjct: 1038 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISS 1097 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C CGL+GY WC C++ V + IPYA KLLFQEL MN+ PRL+L D Sbjct: 1098 DAFEVDVCNKCGLMGYNNWCTTCKSSENVIKMTIPYAAKLLFQELLSMNIAPRLRLGD 1155 [72][TOP] >UniRef100_A7TQC8 DNA-directed RNA polymerase n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TQC8_VANPO Length = 1139 Score = 249 bits (636), Expect = 1e-64 Identities = 118/178 (66%), Positives = 137/178 (76%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GT F G ++ED + LV G++YSGKDM YSG TGE L+AY+F GPI+YQKL Sbjct: 958 VLNGSLEYGTCFGGSKLEDMSRILVDKGFNYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1017 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS Sbjct: 1018 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISS 1077 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C CGL+GY GWC C++ + + IPYA KLLFQEL MN+ PRL+L+D Sbjct: 1078 DAFEVDVCDKCGLMGYSGWCSTCKSAEHNNKMTIPYAAKLLFQELLSMNIAPRLRLED 1135 [73][TOP] >UniRef100_A3LP81 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis RepID=A3LP81_PICST Length = 1155 Score = 249 bits (636), Expect = 1e-64 Identities = 120/178 (67%), Positives = 136/178 (76%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GT F G ++ED ++ LV G+SYSGKDM YSG TGE L+AY+F GPI+YQKL Sbjct: 976 VLNGSLEYGTCFGGSKLEDMSKILVEKGFSYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1035 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS Sbjct: 1036 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISS 1095 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C CGL+GY WC C++ V + IPYA KLLFQEL MN+ PRLKL D Sbjct: 1096 DAFEVDVCNKCGLMGYNSWCTTCKSFEHVIKMTIPYAAKLLFQELLSMNIAPRLKLGD 1153 [74][TOP] >UniRef100_Q59M52 DNA-directed RNA polymerase n=1 Tax=Candida albicans RepID=Q59M52_CANAL Length = 1157 Score = 249 bits (635), Expect = 1e-64 Identities = 118/178 (66%), Positives = 136/178 (76%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GT F G ++ED ++ L+ G+SYSGKDM YSG TGE L+AY+F GPI+YQKL Sbjct: 978 VLNGSLEYGTCFGGSKLEDMSKILIEKGFSYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1037 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS Sbjct: 1038 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISS 1097 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C CGL+GY WC C++ V + IPYA KLLFQEL MN+ PRL+L D Sbjct: 1098 DAFEVDVCNKCGLMGYNSWCTTCKSSENVIKMTIPYAAKLLFQELLSMNIAPRLRLGD 1155 [75][TOP] >UniRef100_A5E0Z1 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus RepID=A5E0Z1_LODEL Length = 1157 Score = 248 bits (634), Expect = 2e-64 Identities = 118/178 (66%), Positives = 136/178 (76%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GT F G ++ED ++ LV+ G+SYSGKDM YSG TGE L+AY+F GPI+YQKL Sbjct: 978 VLNGSLEYGTCFGGSKLEDMSKILVSKGFSYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1037 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS Sbjct: 1038 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISS 1097 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C CGL+GY WC C+ + + IPYA KLLFQEL MN+ PRL+L D Sbjct: 1098 DAFEVDVCNKCGLMGYNSWCTTCKGSENIIKMTIPYAAKLLFQELLSMNIAPRLRLGD 1155 [76][TOP] >UniRef100_Q75B52 DNA-directed RNA polymerase n=1 Tax=Eremothecium gossypii RepID=Q75B52_ASHGO Length = 1141 Score = 248 bits (633), Expect = 2e-64 Identities = 119/178 (66%), Positives = 136/178 (76%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GT F G ++ D +E LV G++YSGKDM Y G TGE L+AYVF GPI+YQKL Sbjct: 960 VLNGTLEYGTCFGGSQLADMSEILVNNGFNYSGKDMLYFGITGECLQAYVFFGPIYYQKL 1019 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS Sbjct: 1020 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMLSS 1079 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C CGL+GY GWC C++ + + IPYA KLLFQEL MN+ PRLKL+D Sbjct: 1080 DAFEVDVCNKCGLMGYSGWCTSCKSAEHIIKMTIPYAAKLLFQELLSMNIAPRLKLED 1137 [77][TOP] >UniRef100_C4Y486 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y486_CLAL4 Length = 1159 Score = 248 bits (633), Expect = 2e-64 Identities = 118/178 (66%), Positives = 136/178 (76%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GT F G ++ED ++ LV G++YSGKDM YSG TGE L+AY+F GPI+YQKL Sbjct: 980 VLNGTLEYGTCFGGSKLEDMSKILVDKGFNYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1039 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHAR+RGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS Sbjct: 1040 KHMVLDKMHARSRGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISS 1099 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C CGL+GY WC C++ V + IPYA KLLFQEL MN+ PRLKL D Sbjct: 1100 DAFEVDVCNNCGLMGYSSWCSTCKSSEHVIKMTIPYAAKLLFQELLSMNIAPRLKLGD 1157 [78][TOP] >UniRef100_A8PVW9 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PVW9_MALGO Length = 1131 Score = 248 bits (633), Expect = 2e-64 Identities = 121/178 (67%), Positives = 136/178 (76%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GTAF G ++ED + LV GY Y GK+ SG TGEPL AYV+ GPI+YQKL Sbjct: 952 VLRGTQEYGTAFGGSKVEDMSRILVEHGYHYGGKEYMTSGMTGEPLEAYVYFGPIYYQKL 1011 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGA+ LL+ERLM SS Sbjct: 1012 KHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGATQLLLERLMVSS 1071 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V AC CGLLGY G+C YC++ V L +PYA KLLFQEL M VVPRL L++ Sbjct: 1072 DAFVVNACEECGLLGYNGYCGYCKSSKHVVKLTVPYATKLLFQELMAMQVVPRLVLEE 1129 [79][TOP] >UniRef100_UPI00003BE866 hypothetical protein DEHA0G24574g n=1 Tax=Debaryomyces hansenii CBS767 RepID=UPI00003BE866 Length = 1165 Score = 248 bits (632), Expect = 3e-64 Identities = 118/178 (66%), Positives = 135/178 (75%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GT F G ++E+ + LV G+SYSGKDM YSG TGE L+AY+F GPI+YQKL Sbjct: 986 VLNGSLEYGTCFGGSKLEEMSRTLVDKGFSYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1045 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS Sbjct: 1046 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMLSS 1105 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C CGL+GY WC C++ + + IPYA KLLFQEL MN+ PRLKL D Sbjct: 1106 DAFEVDICNQCGLMGYNSWCTSCKSSEYIIKMTIPYAAKLLFQELLSMNIAPRLKLGD 1163 [80][TOP] >UniRef100_B5RUZ7 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii RepID=B5RUZ7_DEBHA Length = 1165 Score = 248 bits (632), Expect = 3e-64 Identities = 118/178 (66%), Positives = 135/178 (75%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GT F G ++E+ + LV G+SYSGKDM YSG TGE L+AY+F GPI+YQKL Sbjct: 986 VLNGSLEYGTCFGGSKLEEMSRTLVDKGFSYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1045 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS Sbjct: 1046 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMLSS 1105 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C CGL+GY WC C++ + + IPYA KLLFQEL MN+ PRLKL D Sbjct: 1106 DAFEVDICNQCGLMGYNSWCTSCKSSEYIIKMTIPYAAKLLFQELLSMNIAPRLKLGD 1163 [81][TOP] >UniRef100_B6AC47 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66 RepID=B6AC47_9CRYT Length = 1219 Score = 247 bits (630), Expect = 5e-64 Identities = 113/175 (64%), Positives = 134/175 (76%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G +R GTAF G +ED A+ L+ G+ YSGK+ SG TGE + Y+F GPIFYQKL Sbjct: 1043 VLDGNYRYGTAFGGTPVEDAAKCLIQNGFHYSGKEYLTSGITGEAIETYIFVGPIFYQKL 1102 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 +HMV DKMHAR RGPR +LTRQPTEGRS+DGGLRLGEMERDCL+ YGAS LL+ERLM +S Sbjct: 1103 RHMVLDKMHARGRGPRQILTRQPTEGRSKDGGLRLGEMERDCLVAYGASNLLIERLMLNS 1162 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526 DVF Y C CGL GY +C YCR +S +++PYACKLLFQELQ MNV PR+K Sbjct: 1163 DVFETYVCNKCGLFGYNNYCHYCRNSDDISIIRLPYACKLLFQELQAMNVCPRIK 1217 [82][TOP] >UniRef100_C9ZHX4 DNA-directed RNA polymerase III, putative n=2 Tax=Trypanosoma brucei RepID=C9ZHX4_TRYBG Length = 1129 Score = 246 bits (627), Expect = 1e-63 Identities = 116/174 (66%), Positives = 135/174 (77%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 GKF GTAF GD+ ED E L+ GY+Y GKD+FYSG TGE LRAYVF GPI+YQ+LKHM Sbjct: 951 GKFGDGTAFGGDKAEDLGEELIRHGYNYHGKDIFYSGVTGEMLRAYVFFGPIYYQRLKHM 1010 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V DKMHARA GPR++LTRQPTEGRSR GGLR+GEMERDC++GYGAS LL ERL+ SSD+F Sbjct: 1011 VTDKMHARATGPRSMLTRQPTEGRSRSGGLRVGEMERDCMVGYGASNLLNERLLVSSDLF 1070 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 T+ C CG +GY G+C YC VS + +PYA KLL QELQGM + RL LD Sbjct: 1071 TIDICRCCGFMGYNGYCSYCNAKNTVSRVNVPYAFKLLLQELQGMGISTRLSLD 1124 [83][TOP] >UniRef100_C5M3E6 DNA-directed RNA polymerase n=1 Tax=Candida tropicalis MYA-3404 RepID=C5M3E6_CANTT Length = 1159 Score = 246 bits (627), Expect = 1e-63 Identities = 118/178 (66%), Positives = 135/178 (75%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GT F G ++ED ++ LV G+SYSGKDM SG TGE L+AY+F GPI+YQKL Sbjct: 980 VLNGSLEYGTCFGGSKLEDMSKILVEKGFSYSGKDMLQSGITGECLQAYIFFGPIYYQKL 1039 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS Sbjct: 1040 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISS 1099 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C CGL+GY WC C++ V + IPYA KLLFQEL MN+ PRL+L D Sbjct: 1100 DAFEVDVCNKCGLMGYNNWCTTCQSSENVIKMTIPYAAKLLFQELLSMNIAPRLRLGD 1157 [84][TOP] >UniRef100_C4R793 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115 RepID=C4R793_PICPG Length = 1158 Score = 246 bits (627), Expect = 1e-63 Identities = 114/178 (64%), Positives = 138/178 (77%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G + GT F G +++ ++ L+ G+SYSGKD YSG TGE L+AY+F GPI+YQKL Sbjct: 979 VLDGSLQYGTCFGGSDLKEMSQILIDKGFSYSGKDQLYSGITGECLQAYIFFGPIYYQKL 1038 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHAR+RGPRA+LTRQPTEGRSRDGGLRLGEMERDC++ YGAS LL+ERLM SS Sbjct: 1039 KHMVLDKMHARSRGPRAVLTRQPTEGRSRDGGLRLGEMERDCVVAYGASQLLLERLMISS 1098 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F V C TCGL+GY GWC C++ + + IPYA KLLFQEL MN+ PRL+L D Sbjct: 1099 DAFEVDVCNTCGLMGYNGWCPTCKSSEFIIKMTIPYAAKLLFQELVSMNIAPRLELGD 1156 [85][TOP] >UniRef100_A8WJV6 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae AF16 RepID=A8WJV6_CAEBR Length = 1160 Score = 245 bits (626), Expect = 1e-63 Identities = 122/199 (61%), Positives = 142/199 (71%), Gaps = 23/199 (11%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G + GTAF GD+++D E L A GY+Y GKDM SG TG+PL AY++ GPI+YQKL Sbjct: 957 VMNGTYHYGTAFGGDQVKDVCEELAARGYNYMGKDMLTSGITGQPLSAYIYFGPIYYQKL 1016 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHARARGPRA LTRQPTEGRSR+GGLRLGEMERDCLI YGASMLL+ERLM SS Sbjct: 1017 KHMVLDKMHARARGPRAALTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLIERLMVSS 1076 Query: 362 DVFTVY-----------------------ACGTCGLLGYKGWCQYCRTGAAVSALQIPYA 472 D F V C CG++G KGWCQ CR+ +++ ++IPYA Sbjct: 1077 DEFKVLFRSFVPLIPIEVFFVRRCFQCVDVCTGCGVIGSKGWCQKCRSSKSMANIKIPYA 1136 Query: 473 CKLLFQELQGMNVVPRLKL 529 CKLLFQELQ MN+VPRL L Sbjct: 1137 CKLLFQELQSMNIVPRLDL 1155 [86][TOP] >UniRef100_Q4PBR7 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis RepID=Q4PBR7_USTMA Length = 1169 Score = 245 bits (626), Expect = 1e-63 Identities = 116/175 (66%), Positives = 137/175 (78%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G + GTAF G ++ED + LV GY+Y+GK+ SG TG+PL YV+ GPI+YQ+LKHM Sbjct: 993 GTLQYGTAFGGSKVEDMSALLVENGYNYAGKETLTSGITGQPLECYVYFGPIYYQRLKHM 1052 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V+DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGA+ LL+ERLM SSD F Sbjct: 1053 VQDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGATQLLLERLMISSDAF 1112 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 TV+AC CGL+GY G+C YC + V L IPY KL+ QEL M VVPRL L+D Sbjct: 1113 TVHACQKCGLMGYNGFCPYCSSSKHVVQLTIPYGTKLMLQELMAMQVVPRLVLED 1167 [87][TOP] >UniRef100_B9Q403 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii VEG RepID=B9Q403_TOXGO Length = 1324 Score = 245 bits (625), Expect = 2e-63 Identities = 114/175 (65%), Positives = 137/175 (78%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G + GTAF G +E E L A G+ YSGK+ SG TGE L+ YVFAGPI+YQKLKHM Sbjct: 1149 GACQYGTAFGGVGVETLGEILAAHGFHYSGKEYLTSGITGEALQTYVFAGPIYYQKLKHM 1208 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V+DK+HAR RGPR LLTRQPTEGR+++GGLRLGEMERDCL+ YG+S LLMERLM SSDVF Sbjct: 1209 VQDKIHARGRGPRQLLTRQPTEGRAKEGGLRLGEMERDCLVAYGSSALLMERLMLSSDVF 1268 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 C TCGL+GY+GWC YC++G V+ +++PYACKLLFQEL MNV PRL + + Sbjct: 1269 EASVCSTCGLMGYEGWCPYCKSGKHVAPIRMPYACKLLFQELMSMNVCPRLHIKE 1323 [88][TOP] >UniRef100_B9PFT5 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii GT1 RepID=B9PFT5_TOXGO Length = 1328 Score = 245 bits (625), Expect = 2e-63 Identities = 114/175 (65%), Positives = 137/175 (78%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G + GTAF G +E E L A G+ YSGK+ SG TGE L+ YVFAGPI+YQKLKHM Sbjct: 1153 GACQYGTAFGGVGVETLGEILAAHGFHYSGKEYLTSGITGEALQTYVFAGPIYYQKLKHM 1212 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V+DK+HAR RGPR LLTRQPTEGR+++GGLRLGEMERDCL+ YG+S LLMERLM SSDVF Sbjct: 1213 VQDKIHARGRGPRQLLTRQPTEGRAKEGGLRLGEMERDCLVAYGSSALLMERLMLSSDVF 1272 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 C TCGL+GY+GWC YC++G V+ +++PYACKLLFQEL MNV PRL + + Sbjct: 1273 EASVCSTCGLMGYEGWCPYCKSGKHVAPIRMPYACKLLFQELMSMNVCPRLHIKE 1327 [89][TOP] >UniRef100_B6KDI3 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49 RepID=B6KDI3_TOXGO Length = 1332 Score = 245 bits (625), Expect = 2e-63 Identities = 114/175 (65%), Positives = 137/175 (78%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G + GTAF G +E E L A G+ YSGK+ SG TGE L+ YVFAGPI+YQKLKHM Sbjct: 1157 GACQYGTAFGGVGVETLGEILAAHGFHYSGKEYLTSGITGEALQTYVFAGPIYYQKLKHM 1216 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V+DK+HAR RGPR LLTRQPTEGR+++GGLRLGEMERDCL+ YG+S LLMERLM SSDVF Sbjct: 1217 VQDKIHARGRGPRQLLTRQPTEGRAKEGGLRLGEMERDCLVAYGSSALLMERLMLSSDVF 1276 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 C TCGL+GY+GWC YC++G V+ +++PYACKLLFQEL MNV PRL + + Sbjct: 1277 EASVCSTCGLMGYEGWCPYCKSGKHVAPIRMPYACKLLFQELMSMNVCPRLHIKE 1331 [90][TOP] >UniRef100_Q5KC33 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans RepID=Q5KC33_CRYNE Length = 1129 Score = 244 bits (622), Expect = 4e-63 Identities = 113/175 (64%), Positives = 135/175 (77%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 GK + GTAF G ++ D ++ L+ G+SY GKDM SG TG+P+ AYV+ GPI+YQKLKHM Sbjct: 953 GKLQYGTAFGGSKVVDMSQILIDNGFSYGGKDMLTSGITGQPMEAYVYFGPIYYQKLKHM 1012 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V DKMHAR GPRA LTRQPTEGRS+DGGLRLGEMERDCLIGYGA+ LL+ERLM SSD F Sbjct: 1013 VMDKMHARPTGPRANLTRQPTEGRSKDGGLRLGEMERDCLIGYGATQLLLERLMISSDAF 1072 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 C +CG+LGY WC C++G V L IPYA KLL QEL GMN++P+L L+D Sbjct: 1073 ETQVCESCGMLGYNNWCPKCKSGKGVVGLTIPYAAKLLIQELMGMNIMPKLCLED 1127 [91][TOP] >UniRef100_Q5CPZ8 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium parvum Iowa II RepID=Q5CPZ8_CRYPV Length = 1287 Score = 243 bits (620), Expect = 7e-63 Identities = 112/175 (64%), Positives = 136/175 (77%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G +R GTAF G +E+ A+ LV G+ YSGK+ SG+TGE + AY+F GPI+YQKL Sbjct: 1109 VLDGNYRYGTAFGGTPLEESAKCLVEHGFHYSGKEYLTSGTTGEAIEAYIFVGPIYYQKL 1168 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHAR RGPR +LTRQPTEGRS+DGGLRLGEMERDCL+ YGAS LL+ERLM +S Sbjct: 1169 KHMVLDKMHARGRGPRQILTRQPTEGRSKDGGLRLGEMERDCLVAYGASNLLIERLMLNS 1228 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526 DVF C CGL GY +C YC++ VS +++PYACKLLFQELQ MNV PR++ Sbjct: 1229 DVFETNVCNQCGLFGYNNYCHYCKSSQDVSIIRLPYACKLLFQELQAMNVCPRIR 1283 [92][TOP] >UniRef100_C5JTE0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis SLH14081 RepID=C5JTE0_AJEDS Length = 1204 Score = 241 bits (615), Expect = 3e-62 Identities = 119/175 (68%), Positives = 133/175 (76%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G+F GTAF G +E+ + LV G+SY GKD SG TGEPL AYVF GPI+YQKLKHM Sbjct: 1022 GQFGYGTAFGGSPVEEMSAILVDHGFSYGGKDYLTSGITGEPLPAYVFMGPIYYQKLKHM 1081 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD Sbjct: 1082 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1141 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 V C +CG +GY GWCQ C+T V + IPYA KLL QEL MNVV RLKL D Sbjct: 1142 EVDVCESCGFMGYLGWCQRCKTSRGVVKMVIPYAAKLLVQELFSMNVVARLKLAD 1196 [93][TOP] >UniRef100_C5GKN6 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3 RepID=C5GKN6_AJEDR Length = 1228 Score = 241 bits (615), Expect = 3e-62 Identities = 119/175 (68%), Positives = 133/175 (76%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G+F GTAF G +E+ + LV G+SY GKD SG TGEPL AYVF GPI+YQKLKHM Sbjct: 1046 GQFGYGTAFGGSPVEEMSAILVDHGFSYGGKDYLTSGITGEPLPAYVFMGPIYYQKLKHM 1105 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD Sbjct: 1106 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1165 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 V C +CG +GY GWCQ C+T V + IPYA KLL QEL MNVV RLKL D Sbjct: 1166 EVDVCESCGFMGYLGWCQRCKTSRGVVKMVIPYAAKLLVQELFSMNVVARLKLAD 1220 [94][TOP] >UniRef100_A6R9I0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1 RepID=A6R9I0_AJECN Length = 1186 Score = 241 bits (615), Expect = 3e-62 Identities = 119/175 (68%), Positives = 132/175 (75%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G+F GTAF G +E+ + LV G+SY GKD SG TGEPL AYVF GPI+YQKLKHM Sbjct: 1004 GQFGYGTAFGGSPVEEMSAILVDHGFSYGGKDYLTSGITGEPLPAYVFMGPIYYQKLKHM 1063 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD Sbjct: 1064 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1123 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 V C CG +GY GWCQ C+T V + IPYA KLL QEL MNVV RLKL D Sbjct: 1124 EVDVCENCGFMGYLGWCQRCKTSRGVVKMAIPYAAKLLVQELFSMNVVARLKLAD 1178 [95][TOP] >UniRef100_A4RS40 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RS40_OSTLU Length = 1146 Score = 241 bits (614), Expect = 4e-62 Identities = 116/184 (63%), Positives = 137/184 (74%), Gaps = 6/184 (3%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 + G+F GTAF GD +E + LV +GYSY GKDM + G TGE L VF GP++YQKL Sbjct: 962 LESGRFHDGTAFGGDTVEAIQQTLVESGYSYKGKDMLHCGITGEALEVNVFMGPVYYQKL 1021 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMHARARGPR +LTRQPTEGR+RDGGLRLGEMERDCLIGYGAS L++ERLM SS Sbjct: 1022 KHMVQDKMHARARGPRVVLTRQPTEGRARDGGLRLGEMERDCLIGYGASQLILERLMISS 1081 Query: 362 DVFTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 D F C CGLLG+ + C C+T A V+ L++PYACKLLFQELQ MN+ PRL Sbjct: 1082 DQFEAQVCTKCGLLGFQHHITRRNACTLCKTEAEVATLKLPYACKLLFQELQSMNIAPRL 1141 Query: 524 KLDD 535 L + Sbjct: 1142 SLTE 1145 [96][TOP] >UniRef100_C6HGH3 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HGH3_AJECH Length = 1227 Score = 241 bits (614), Expect = 4e-62 Identities = 119/175 (68%), Positives = 132/175 (75%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G+F GTAF G +E+ + LV G+SY GKD SG TGEPL AYVF GPI+YQKLKHM Sbjct: 1045 GQFGYGTAFGGSPVEEMSAILVDHGFSYGGKDYLTSGITGEPLPAYVFMGPIYYQKLKHM 1104 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD Sbjct: 1105 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1164 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 V C CG +GY GWCQ C+T V + IPYA KLL QEL MNVV RLKL D Sbjct: 1165 EVDVCENCGFMGYLGWCQRCKTSRGVVKMVIPYAAKLLVQELFSMNVVARLKLAD 1219 [97][TOP] >UniRef100_C0P0A1 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR RepID=C0P0A1_AJECG Length = 1227 Score = 241 bits (614), Expect = 4e-62 Identities = 119/175 (68%), Positives = 132/175 (75%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G+F GTAF G +E+ + LV G+SY GKD SG TGEPL AYVF GPI+YQKLKHM Sbjct: 1045 GQFGYGTAFGGSPVEEMSAILVDHGFSYGGKDYLTSGITGEPLPAYVFMGPIYYQKLKHM 1104 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD Sbjct: 1105 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1164 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 V C CG +GY GWCQ C+T V + IPYA KLL QEL MNVV RLKL D Sbjct: 1165 EVDVCENCGFMGYLGWCQRCKTSRGVVKMVIPYAAKLLVQELFSMNVVARLKLAD 1219 [98][TOP] >UniRef100_C1N4K3 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N4K3_9CHLO Length = 1197 Score = 240 bits (612), Expect = 6e-62 Identities = 120/182 (65%), Positives = 136/182 (74%), Gaps = 6/182 (3%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 +G+F GTAF GD ED LV G+SY+GKD+ + G TGEPL AY+F GP++YQKLKH Sbjct: 1016 DGRFHDGTAFAGDTAEDIGATLVNHGFSYNGKDLLHCGITGEPLVAYIFMGPVYYQKLKH 1075 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV DKMHARARGPR +LTRQPTEGR+RDGGLRLGEMERDCLIGYGAS L++ERLM SSD Sbjct: 1076 MVLDKMHARARGPRVVLTRQPTEGRARDGGLRLGEMERDCLIGYGASALILERLMISSDQ 1135 Query: 368 FTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 F C CGLL Y K C C A VSAL++PYACKLLFQELQ MN+ PRL L Sbjct: 1136 FEAQVCNKCGLLAYRHHGTGKDACAQCE-DADVSALKLPYACKLLFQELQSMNICPRLTL 1194 Query: 530 DD 535 D Sbjct: 1195 SD 1196 [99][TOP] >UniRef100_C4JMP0 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704 RepID=C4JMP0_UNCRE Length = 1202 Score = 240 bits (612), Expect = 6e-62 Identities = 118/178 (66%), Positives = 132/178 (74%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G+F GT F G +E+ + LV+ G+SY GKD SG TGEPL AYVF GPI+YQKL Sbjct: 1017 VLSGQFGYGTPFGGSPVEEMSAILVSKGFSYGGKDYLTSGITGEPLPAYVFTGPIYYQKL 1076 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SS Sbjct: 1077 KHMVQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISS 1136 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D V C CG +GY GWCQ C+T V + IPYA KLL QEL MNVV R KL D Sbjct: 1137 DRHEVDVCENCGFMGYLGWCQRCKTSRGVVKMAIPYAAKLLVQELFSMNVVARFKLAD 1194 [100][TOP] >UniRef100_C1HBD0 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1HBD0_PARBA Length = 1205 Score = 239 bits (611), Expect = 8e-62 Identities = 117/175 (66%), Positives = 133/175 (76%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G+F GTAF G +E+ + LV G+SY GKD SG TGE L AYVF GPI+YQKLKHM Sbjct: 1023 GQFSYGTAFGGSPVEEMSAILVKHGFSYGGKDCLTSGITGESLPAYVFMGPIYYQKLKHM 1082 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD + Sbjct: 1083 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDQY 1142 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 V C +CG +GY GWCQ C++ V + IPYA KLL QEL MNVV RLKL D Sbjct: 1143 EVDVCESCGFMGYSGWCQRCKSSRGVVKMIIPYAAKLLVQELFSMNVVARLKLAD 1197 [101][TOP] >UniRef100_A7EEL3 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7EEL3_SCLS1 Length = 1230 Score = 239 bits (610), Expect = 1e-61 Identities = 115/178 (64%), Positives = 134/178 (75%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GT F G ++ + L+ G+SYSGKD SG TGE L AYVF GPI+YQKL Sbjct: 1043 VVNGSLEYGTCFGGSNVDVMGKILIDKGFSYSGKDFVTSGITGESLPAYVFFGPIYYQKL 1102 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMH+R+RGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YGAS LL+ERLM SS Sbjct: 1103 KHMVQDKMHSRSRGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGASQLLLERLMLSS 1162 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D V C TCGL+GY GWCQ C++ VS + +PYA KLL QE+ MNV+ RLKL+D Sbjct: 1163 DAHEVDICETCGLMGYSGWCQTCKSSKGVSTMTMPYAAKLLVQEMLSMNVLVRLKLED 1220 [102][TOP] >UniRef100_A6RTM2 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6RTM2_BOTFB Length = 450 Score = 239 bits (610), Expect = 1e-61 Identities = 115/178 (64%), Positives = 134/178 (75%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GT F G ++ + L+ G+SYSGKD SG TGE L AYVF GPI+YQKL Sbjct: 263 VINGSLEYGTCFGGSNVDVMGQILIDNGFSYSGKDFVTSGITGESLPAYVFFGPIYYQKL 322 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMH+R+RGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YGAS LL+ERLM SS Sbjct: 323 KHMVQDKMHSRSRGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGASQLLLERLMLSS 382 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D V C TCGL+GY GWCQ C++ VS + +PYA KLL QE+ MNV+ RLKL+D Sbjct: 383 DAHQVDICETCGLMGYSGWCQTCKSSKGVSTMTMPYAAKLLVQEMLSMNVLVRLKLED 440 [103][TOP] >UniRef100_Q84R88 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=Q84R88_ORYSJ Length = 1174 Score = 238 bits (608), Expect = 2e-61 Identities = 117/186 (62%), Positives = 139/186 (74%), Gaps = 11/186 (5%) Frame = +2 Query: 11 GKFRMGTAF-----DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQ 175 G+F G+AF + D++ED + LV G+SY+GKD+ YSG G P +AYVF GPI+YQ Sbjct: 988 GQFHYGSAFGEPSGNADKVEDISRTLVKHGFSYNGKDLLYSGILGHPCQAYVFMGPIYYQ 1047 Query: 176 KLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMH 355 KLKHMV DKMHARA GPR LLTRQPTEGRSRDGGLRLGEMERDCLI YGASML+ ERL+ Sbjct: 1048 KLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLI 1107 Query: 356 SSDVFTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVP 517 SSD + V C CGLLGY +C C+ G ++ +++PYACKLLFQELQ MNVVP Sbjct: 1108 SSDPYQVQVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMNVVP 1167 Query: 518 RLKLDD 535 RLKL + Sbjct: 1168 RLKLTE 1173 [104][TOP] >UniRef100_Q10JZ3 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=Q10JZ3_ORYSJ Length = 1155 Score = 238 bits (608), Expect = 2e-61 Identities = 117/186 (62%), Positives = 139/186 (74%), Gaps = 11/186 (5%) Frame = +2 Query: 11 GKFRMGTAF-----DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQ 175 G+F G+AF + D++ED + LV G+SY+GKD+ YSG G P +AYVF GPI+YQ Sbjct: 969 GQFHYGSAFGEPSGNADKVEDISRTLVKHGFSYNGKDLLYSGILGHPCQAYVFMGPIYYQ 1028 Query: 176 KLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMH 355 KLKHMV DKMHARA GPR LLTRQPTEGRSRDGGLRLGEMERDCLI YGASML+ ERL+ Sbjct: 1029 KLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLI 1088 Query: 356 SSDVFTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVP 517 SSD + V C CGLLGY +C C+ G ++ +++PYACKLLFQELQ MNVVP Sbjct: 1089 SSDPYQVQVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMNVVP 1148 Query: 518 RLKLDD 535 RLKL + Sbjct: 1149 RLKLTE 1154 [105][TOP] >UniRef100_Q1DTS7 DNA-directed RNA polymerase n=2 Tax=Coccidioides RepID=Q1DTS7_COCIM Length = 1233 Score = 238 bits (607), Expect = 2e-61 Identities = 116/175 (66%), Positives = 132/175 (75%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G+F GTAF G +E+ + L++ G++Y GKD SG TGE L AYVF GPI+YQKLKHM Sbjct: 1051 GQFGYGTAFGGSPVEEMSAILISKGFNYGGKDYLTSGITGEALPAYVFTGPIYYQKLKHM 1110 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD Sbjct: 1111 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1170 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 V C CG +GY GWCQ C+T V + IPYA KLL QEL MNVV RLKL D Sbjct: 1171 EVDVCENCGFMGYLGWCQRCKTSRGVVKMVIPYAAKLLVQELFSMNVVARLKLAD 1225 [106][TOP] >UniRef100_C5FVS4 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480 RepID=C5FVS4_NANOT Length = 1211 Score = 238 bits (606), Expect = 3e-61 Identities = 117/175 (66%), Positives = 130/175 (74%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G+F GT F G +E+ + LV G+SY GKD SG TGEPL YVF GPI+YQKLKHM Sbjct: 1029 GQFGYGTPFGGSPVEEMSAILVDHGFSYGGKDYLTSGITGEPLTYYVFTGPIYYQKLKHM 1088 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V+DKMH+RARGPRA LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD Sbjct: 1089 VQDKMHSRARGPRATLTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1148 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 V C CG +GY GWCQ C+T A V + IPYA KLL QEL MNVV RL+L D Sbjct: 1149 EVDVCEGCGFMGYSGWCQRCKTSAGVVKMVIPYAAKLLVQELFSMNVVARLRLQD 1203 [107][TOP] >UniRef100_A9RNX6 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA Length = 1135 Score = 237 bits (605), Expect = 4e-61 Identities = 114/187 (60%), Positives = 139/187 (74%), Gaps = 11/187 (5%) Frame = +2 Query: 2 VHEGKFRMGTAFD-----GDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPI 166 +H GKF G+AF D++ + LV G+SYSGKD YSG TG PL+AY+F GPI Sbjct: 946 LHNGKFHYGSAFGEPSGHADKVSTISATLVKHGFSYSGKDFIYSGITGSPLQAYIFMGPI 1005 Query: 167 FYQKLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMER 346 +YQKLKHMV DKMHARARGPR +LTRQPTEGRSR+GGLRLGEMERDCLI YGASM+++ER Sbjct: 1006 YYQKLKHMVLDKMHARARGPRVVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMMILER 1065 Query: 347 LMHSSDVFTVYACGTCGLLGYKG------WCQYCRTGAAVSALQIPYACKLLFQELQGMN 508 LM SSD F + C CG++GY C C++G ++ +++PYACKLLFQELQ MN Sbjct: 1066 LMISSDQFQIQVCTKCGMIGYYHHKLKICLCSTCKSGDNIATMKLPYACKLLFQELQSMN 1125 Query: 509 VVPRLKL 529 +VPRL L Sbjct: 1126 IVPRLTL 1132 [108][TOP] >UniRef100_Q4DWA6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Trypanosoma cruzi RepID=Q4DWA6_TRYCR Length = 382 Score = 237 bits (604), Expect = 5e-61 Identities = 114/174 (65%), Positives = 134/174 (77%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G F GTAF GD ED L+ G++Y GKD+FYSG TGE ++AYVF GPI+YQ+LKHM Sbjct: 204 GTFGDGTAFGGDNAEDLGMHLLRNGFNYHGKDVFYSGITGEIMQAYVFFGPIYYQRLKHM 263 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V DKMHARA GPR++LTRQPTEGRSR GGLR+GEMERDC++GYGAS LL ERL+ SSD+F Sbjct: 264 VTDKMHARATGPRSMLTRQPTEGRSRSGGLRVGEMERDCMVGYGASNLLNERLLLSSDLF 323 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 TV C +CG LGY G+C YC T VS + +PYA KLL QELQGM + RL LD Sbjct: 324 TVDTCRSCGFLGYCGYCPYCNTKNTVSHVNVPYAFKLLLQELQGMGISTRLSLD 377 [109][TOP] >UniRef100_UPI0001985A70 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001985A70 Length = 1142 Score = 236 bits (603), Expect = 7e-61 Identities = 117/186 (62%), Positives = 138/186 (74%), Gaps = 11/186 (5%) Frame = +2 Query: 11 GKFRMGTAFD-----GDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQ 175 G+F G+AF D++E ++ LV G+SYSGKD YSG TG PL+AY+F GPI+YQ Sbjct: 956 GRFHYGSAFGEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQ 1015 Query: 176 KLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMH 355 KLKHMV DKMHAR GPR +LTRQPTEGR+R+GGLR+GEMERDCLI YGASML+ ERLM Sbjct: 1016 KLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMV 1075 Query: 356 SSDVFTVYACGTCGLLGYK------GWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVP 517 SSD F V C CGLLGY G C C+ G +S +++PYACKLLFQELQ MNVVP Sbjct: 1076 SSDPFEVQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVP 1135 Query: 518 RLKLDD 535 RLKL + Sbjct: 1136 RLKLTE 1141 [110][TOP] >UniRef100_A7QMF0 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7QMF0_VITVI Length = 1146 Score = 236 bits (603), Expect = 7e-61 Identities = 117/186 (62%), Positives = 138/186 (74%), Gaps = 11/186 (5%) Frame = +2 Query: 11 GKFRMGTAFD-----GDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQ 175 G+F G+AF D++E ++ LV G+SYSGKD YSG TG PL+AY+F GPI+YQ Sbjct: 960 GRFHYGSAFGEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQ 1019 Query: 176 KLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMH 355 KLKHMV DKMHAR GPR +LTRQPTEGR+R+GGLR+GEMERDCLI YGASML+ ERLM Sbjct: 1020 KLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMV 1079 Query: 356 SSDVFTVYACGTCGLLGYK------GWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVP 517 SSD F V C CGLLGY G C C+ G +S +++PYACKLLFQELQ MNVVP Sbjct: 1080 SSDPFEVQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVP 1139 Query: 518 RLKLDD 535 RLKL + Sbjct: 1140 RLKLTE 1145 [111][TOP] >UniRef100_C5Z6F6 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor RepID=C5Z6F6_SORBI Length = 1137 Score = 236 bits (602), Expect = 9e-61 Identities = 115/186 (61%), Positives = 136/186 (73%), Gaps = 11/186 (5%) Frame = +2 Query: 11 GKFRMGTAF-----DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQ 175 G+F G+AF + D + D + L+ G+SY+GKD YSG G+PL AY+F GPI+YQ Sbjct: 951 GRFHYGSAFGEPSGNADNVADISSTLIKHGFSYNGKDFLYSGILGQPLEAYIFMGPIYYQ 1010 Query: 176 KLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMH 355 KLKHMV DKMHARA GPR LLTRQPTEGRSRDGGLRLGEMERDCLI YGASML+ ERLM Sbjct: 1011 KLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLML 1070 Query: 356 SSDVFTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVP 517 SSD + V C CGLLGY +C C+ G ++ +++PYACKLLFQEL MNVVP Sbjct: 1071 SSDPYQVQVCRKCGLLGYYNHKLKTSYCSMCKNGENMAKMRLPYACKLLFQELHAMNVVP 1130 Query: 518 RLKLDD 535 RLKL + Sbjct: 1131 RLKLTE 1136 [112][TOP] >UniRef100_Q4D9P5 DNA-directed RNA polymerase n=1 Tax=Trypanosoma cruzi RepID=Q4D9P5_TRYCR Length = 1130 Score = 236 bits (602), Expect = 9e-61 Identities = 114/174 (65%), Positives = 133/174 (76%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G F GTAF GD ED L+ G++Y GKD FYSG TGE ++AYVF GPI+YQ+LKHM Sbjct: 952 GTFGDGTAFGGDNAEDLGMHLLRNGFNYHGKDAFYSGITGEIMQAYVFFGPIYYQRLKHM 1011 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V DKMHARA GPR++LTRQPTEGRSR GGLR+GEMERDC++GYGAS LL ERL+ SSD+F Sbjct: 1012 VTDKMHARATGPRSMLTRQPTEGRSRSGGLRVGEMERDCMVGYGASNLLNERLLLSSDLF 1071 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 TV C +CG LGY G+C YC T VS + +PYA KLL QELQGM + RL LD Sbjct: 1072 TVDTCRSCGFLGYCGYCPYCNTKNTVSHVNVPYAFKLLLQELQGMGISTRLSLD 1125 [113][TOP] >UniRef100_UPI00005DC295 NRPC2; DNA binding / DNA-directed RNA polymerase/ ribonucleoside binding n=1 Tax=Arabidopsis thaliana RepID=UPI00005DC295 Length = 1161 Score = 234 bits (596), Expect = 4e-60 Identities = 113/186 (60%), Positives = 138/186 (74%), Gaps = 11/186 (5%) Frame = +2 Query: 11 GKFRMGTAFD-----GDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQ 175 G+F G+AF D++E + LV G+SYSGKD+ YSG +GEP+ AY+F GPI+YQ Sbjct: 975 GRFHYGSAFGERSGHADKVETISATLVEKGFSYSGKDLLYSGISGEPVEAYIFMGPIYYQ 1034 Query: 176 KLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMH 355 KLKHMV DKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGASML+ ERLM Sbjct: 1035 KLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERLMI 1094 Query: 356 SSDVFTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVP 517 SSD F V C CGLLGY K C C+ G ++ +++PYACKLLFQELQ MNVVP Sbjct: 1095 SSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQELQSMNVVP 1154 Query: 518 RLKLDD 535 RLKL + Sbjct: 1155 RLKLTE 1160 [114][TOP] >UniRef100_A2E3T5 DNA-directed RNA polymerase n=1 Tax=Trichomonas vaginalis G3 RepID=A2E3T5_TRIVA Length = 1142 Score = 234 bits (596), Expect = 4e-60 Identities = 106/175 (60%), Positives = 134/175 (76%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G+ GTAF DR++D A+ L+AAGYSYSGKDM SG TGEPL AY+F GP+FYQ LKHM Sbjct: 967 GRIGNGTAFSSDRVKDIADDLIAAGYSYSGKDMLMSGITGEPLYAYIFFGPVFYQSLKHM 1026 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 VKDKM ARA G LTRQPT+GRSR GG+RLGEMERDCLIGYGA+ +L ER++ SSDV+ Sbjct: 1027 VKDKMQARATGQVQYLTRQPTQGRSRQGGMRLGEMERDCLIGYGAASILYERMLISSDVY 1086 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 C CG +GY+G+C +C+T + +++PYACKLLF EL M + P+++L+D Sbjct: 1087 EANVCAKCGFIGYEGYCTHCKTKEYMKIVRMPYACKLLFYELMAMGIAPKVRLED 1141 [115][TOP] >UniRef100_UPI000186CFA7 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186CFA7 Length = 1137 Score = 233 bits (595), Expect = 6e-60 Identities = 106/173 (61%), Positives = 131/173 (75%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 GK GTAF G + + E LV ++Y GKD+ YSG TGEP+ YV++GP+FYQ+LKHM Sbjct: 959 GKHHYGTAFGGSTVSEVQEELVKNKFNYEGKDILYSGITGEPMEVYVYSGPVFYQRLKHM 1018 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V+DK+HARARGPRA+LTRQPTEGR+ DGGLRLGEMERDCLI YGAS ++ ERLM SSD F Sbjct: 1019 VQDKIHARARGPRAVLTRQPTEGRAADGGLRLGEMERDCLIAYGASSMISERLMISSDAF 1078 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 C CGL+ Y WC C++ +S +++PYA KLLFQEL+ MN+VPRL L Sbjct: 1079 QCDVCNECGLIAYSKWCHGCKSSKEISTIKLPYATKLLFQELRSMNIVPRLSL 1131 [116][TOP] >UniRef100_UPI00017918AB PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit C2) (DNA-directed RNA polymerase III subunit B) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (C128) n=1 Tax=Acyrthosiphon pisum RepID=UPI00017918AB Length = 1112 Score = 233 bits (595), Expect = 6e-60 Identities = 106/176 (60%), Positives = 134/176 (76%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V EGKF+ G+AF G + D + L Y+Y GKD+ Y G G P+ AY+++GP+FYQ+L Sbjct: 932 VLEGKFQDGSAFGGATVTDISNELQKHNYNYLGKDVLYCGIDGRPMEAYIYSGPVFYQRL 991 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DK+HAR+RGPR LLTRQPTEGRS+DGGLR+GEMERDCLI YGASML++ERLM SS Sbjct: 992 KHMVADKIHARSRGPRVLLTRQPTEGRSKDGGLRMGEMERDCLIAYGASMLIIERLMLSS 1051 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 DV + C CGL Y GWC C+ +V +++PYACKLLFQELQ M++VP++ L Sbjct: 1052 DVVEMDVCKLCGLFSYSGWCHMCQKSNSVCRIKMPYACKLLFQELQAMSIVPKISL 1107 [117][TOP] >UniRef100_B9SHS2 DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9SHS2_RICCO Length = 1139 Score = 233 bits (595), Expect = 6e-60 Identities = 115/184 (62%), Positives = 136/184 (73%), Gaps = 11/184 (5%) Frame = +2 Query: 11 GKFRMGTAFD-----GDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQ 175 G+F G+AF D +E +E LV G+SY+GKD+ YSG TG PL+AY+F GPI+YQ Sbjct: 953 GRFHYGSAFGEPSGHADTVEAISETLVNRGFSYNGKDIIYSGITGCPLQAYIFMGPIYYQ 1012 Query: 176 KLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMH 355 KLKHMV DKMHAR GPR +LTRQPTEGR+R+GGLR+GEMERDCLI YGASML+ ERLM Sbjct: 1013 KLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMI 1072 Query: 356 SSDVFTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVP 517 SSD F V C CGLLGY G C C+ G +S +++PYACKLL QELQ MN+VP Sbjct: 1073 SSDPFEVQVCRVCGLLGYFNQKLRAGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVP 1132 Query: 518 RLKL 529 RLKL Sbjct: 1133 RLKL 1136 [118][TOP] >UniRef100_B9F8X6 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=B9F8X6_ORYSJ Length = 1115 Score = 233 bits (595), Expect = 6e-60 Identities = 112/172 (65%), Positives = 132/172 (76%), Gaps = 6/172 (3%) Frame = +2 Query: 38 DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARA 217 + D++ED + LV G+SY+GKD+ YSG G P +AYVF GPI+YQKLKHMV DKMHARA Sbjct: 943 NADKVEDISRTLVKHGFSYNGKDLLYSGILGHPCQAYVFMGPIYYQKLKHMVLDKMHARA 1002 Query: 218 RGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCG 397 GPR LLTRQPTEGRSRDGGLRLGEMERDCLI YGASML+ ERL+ SSD + V C CG Sbjct: 1003 SGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLISSDPYQVQVCRKCG 1062 Query: 398 LLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 LLGY +C C+ G ++ +++PYACKLLFQELQ MNVVPRLKL + Sbjct: 1063 LLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMNVVPRLKLTE 1114 [119][TOP] >UniRef100_B8AR02 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group RepID=B8AR02_ORYSI Length = 1117 Score = 233 bits (595), Expect = 6e-60 Identities = 112/172 (65%), Positives = 132/172 (76%), Gaps = 6/172 (3%) Frame = +2 Query: 38 DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARA 217 + D++ED + LV G+SY+GKD+ YSG G P +AYVF GPI+YQKLKHMV DKMHARA Sbjct: 945 NADKVEDISRTLVKHGFSYNGKDLLYSGILGHPCQAYVFMGPIYYQKLKHMVLDKMHARA 1004 Query: 218 RGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCG 397 GPR LLTRQPTEGRSRDGGLRLGEMERDCLI YGASML+ ERL+ SSD + V C CG Sbjct: 1005 SGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLISSDPYQVQVCRKCG 1064 Query: 398 LLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 LLGY +C C+ G ++ +++PYACKLLFQELQ MNVVPRLKL + Sbjct: 1065 LLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMNVVPRLKLTE 1116 [120][TOP] >UniRef100_Q8SQY8 DNA-directed RNA polymerase n=1 Tax=Encephalitozoon cuniculi RepID=Q8SQY8_ENCCU Length = 1110 Score = 233 bits (595), Expect = 6e-60 Identities = 111/177 (62%), Positives = 136/177 (76%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V EG+ TAF + +E E L+ G+SYSGKD F SG+TG PL AY+F GP+FYQ+L Sbjct: 935 VLEGQILDSTAFKENSVEQTCELLIKHGFSYSGKDCFTSGTTGAPLAAYIFFGPVFYQRL 994 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DK+H RARGPRA+LTRQPTEGRS+DGGL+LGEMERDCLIGYGAS L+ ERLM SS Sbjct: 995 KHMVADKIHMRARGPRAILTRQPTEGRSKDGGLKLGEMERDCLIGYGASSLITERLMTSS 1054 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 DVF Y C +CG+L +KG C C+ G +++PYACKLLFQEL MN++PRL ++ Sbjct: 1055 DVFEAYVCRSCGVLAFKGCCVACK-GTKPVKVKMPYACKLLFQELMSMNILPRLHIE 1110 [121][TOP] >UniRef100_Q01FH9 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri RepID=Q01FH9_OSTTA Length = 2569 Score = 232 bits (592), Expect = 1e-59 Identities = 113/182 (62%), Positives = 134/182 (73%), Gaps = 6/182 (3%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 + G+F GTAF GD +E + LV AG+S+ GKDM + G TGE L VF GP++YQKL Sbjct: 992 LENGRFHDGTAFAGDSVEAIQQTLVEAGFSHKGKDMLHCGITGEALEVNVFMGPVYYQKL 1051 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMHARARGPR +LTRQPTEGR+RDGGLRLGEMERDCLIGYGAS L++ERLM SS Sbjct: 1052 KHMVQDKMHARARGPRVVLTRQPTEGRARDGGLRLGEMERDCLIGYGASQLILERLMISS 1111 Query: 362 DVFTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 D F C CGLLG+ K C C+T A V+ L++PYA KLLFQELQ N+ PR+ Sbjct: 1112 DQFEAQVCTKCGLLGFQHHITGKNACTLCKTEAEVATLKLPYAAKLLFQELQSCNIAPRI 1171 Query: 524 KL 529 L Sbjct: 1172 NL 1173 [122][TOP] >UniRef100_Q2URF4 DNA-directed RNA polymerase n=1 Tax=Aspergillus oryzae RepID=Q2URF4_ASPOR Length = 1180 Score = 230 bits (587), Expect = 5e-59 Identities = 110/175 (62%), Positives = 129/175 (73%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G+ GT F G +E+ ++ L+ G+SY GKD SG TGE L YVF GPI+YQKLKHM Sbjct: 998 GQHGYGTCFGGSPVEEMSQILIDKGFSYGGKDYLTSGITGEALPFYVFTGPIYYQKLKHM 1057 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD Sbjct: 1058 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1117 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 + C CG +GY WCQ C++ +V + IPYA KLL QEL MNV RLKL+D Sbjct: 1118 EIDVCEQCGFMGYLNWCQRCKSSRSVVKMAIPYAAKLLIQELMSMNVTARLKLED 1172 [123][TOP] >UniRef100_Q0CN89 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624 RepID=Q0CN89_ASPTN Length = 1219 Score = 230 bits (587), Expect = 5e-59 Identities = 111/178 (62%), Positives = 130/178 (73%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G+ GT F G +E+ ++ L+ G+SY GKD SG TGE L YVF GPI+YQKL Sbjct: 1034 VLSGQHGYGTCFGGSPVEEMSQILIDKGFSYGGKDYLTSGITGEALPFYVFTGPIYYQKL 1093 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SS Sbjct: 1094 KHMVQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISS 1153 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D + C CG +GY WCQ C++ +V + IPYA KLL QEL MNV RLKL+D Sbjct: 1154 DRHEIDVCEKCGFMGYLNWCQRCKSSRSVVKMVIPYAAKLLIQELMSMNVTARLKLED 1211 [124][TOP] >UniRef100_B8MYG2 DNA-directed RNA polymerase n=1 Tax=Aspergillus flavus NRRL3357 RepID=B8MYG2_ASPFN Length = 1218 Score = 230 bits (587), Expect = 5e-59 Identities = 110/175 (62%), Positives = 129/175 (73%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G+ GT F G +E+ ++ L+ G+SY GKD SG TGE L YVF GPI+YQKLKHM Sbjct: 1036 GQHGYGTCFGGSPVEEMSQILIDKGFSYGGKDYLTSGITGEALPFYVFTGPIYYQKLKHM 1095 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD Sbjct: 1096 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1155 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 + C CG +GY WCQ C++ +V + IPYA KLL QEL MNV RLKL+D Sbjct: 1156 EIDVCEQCGFMGYLNWCQRCKSSRSVVKMAIPYAAKLLIQELMSMNVTARLKLED 1210 [125][TOP] >UniRef100_B8MJE1 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500 RepID=B8MJE1_TALSN Length = 1212 Score = 230 bits (587), Expect = 5e-59 Identities = 113/178 (63%), Positives = 129/178 (72%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G+ GTAF G +E+ + LV G+SY GKD SG TG+PL YVF GPI+YQKL Sbjct: 1027 VLSGQHGYGTAFGGSPVEEMSAILVDKGFSYGGKDYLTSGITGDPLPFYVFTGPIYYQKL 1086 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMH+R+ GPRA LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SS Sbjct: 1087 KHMVQDKMHSRSTGPRATLTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMLSS 1146 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D V C CG +GY+ WCQ CR+ V + IPYA KLL QEL MNV RLKL+D Sbjct: 1147 DKHEVDICEKCGFMGYQNWCQRCRSSRGVVKMTIPYAAKLLIQELLSMNVTARLKLED 1204 [126][TOP] >UniRef100_B2B0Z1 DNA-directed RNA polymerase n=1 Tax=Podospora anserina RepID=B2B0Z1_PODAN Length = 1160 Score = 230 bits (587), Expect = 5e-59 Identities = 110/174 (63%), Positives = 135/174 (77%) Frame = +2 Query: 14 KFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMV 193 ++ G AF +E+ + L+ G+S+ GKD F SG TGEP AY+F GPIFYQ+LKHMV Sbjct: 981 EYGFGDAFRSHPVEEMGKVLIEHGFSWEGKDYFTSGITGEPHEAYLFNGPIFYQRLKHMV 1040 Query: 194 KDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFT 373 DKMH+R+RGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YGAS LL+ERLM+SSDV Sbjct: 1041 ADKMHSRSRGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGASQLLLERLMYSSDVTK 1100 Query: 374 VYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 V C CGL+GYKG+CQ C+T + V+ + +PYA KLL QEL MNV R++L+D Sbjct: 1101 VDVCERCGLMGYKGYCQTCKTTSNVTKMNMPYAAKLLLQELISMNVGVRMQLED 1154 [127][TOP] >UniRef100_B0XMI5 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus RepID=B0XMI5_ASPFC Length = 1200 Score = 230 bits (587), Expect = 5e-59 Identities = 111/175 (63%), Positives = 127/175 (72%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G GT F G +E+ + L+ G+SY GKD SG TGE L YVF GPI+YQKLKHM Sbjct: 1018 GHHGYGTCFGGTPVEEASRVLIDHGFSYGGKDYLTSGITGEALPFYVFTGPIYYQKLKHM 1077 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD Sbjct: 1078 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1137 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 + C CG +GY WCQ C++ +V + IPYA KLL QEL MNV RLKLDD Sbjct: 1138 EIDVCEQCGFMGYLNWCQRCKSSRSVVKMTIPYAAKLLIQELMSMNVTARLKLDD 1192 [128][TOP] >UniRef100_A2Q8V9 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88 RepID=A2Q8V9_ASPNC Length = 1225 Score = 230 bits (587), Expect = 5e-59 Identities = 110/175 (62%), Positives = 129/175 (73%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G+ GT F G +++ ++ L+ G+SY GKD SG TGE L YVF GPI+YQKLKHM Sbjct: 1043 GQHGYGTCFGGSPVQEMSQILIDNGFSYGGKDYLTSGITGEALPFYVFTGPIYYQKLKHM 1102 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD Sbjct: 1103 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1162 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 + C CG +GY WCQ C++ +V + IPYA KLL QEL MNV RLKLDD Sbjct: 1163 EIDVCEQCGFMGYLNWCQRCKSSRSVVKMAIPYAAKLLIQELMSMNVTARLKLDD 1217 [129][TOP] >UniRef100_A8IY03 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii RepID=A8IY03_CHLRE Length = 1161 Score = 230 bits (586), Expect = 6e-59 Identities = 119/186 (63%), Positives = 138/186 (74%), Gaps = 11/186 (5%) Frame = +2 Query: 11 GKFRMGTAFD-----GDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQ 175 G+F GTAF D++ED + LV G+SYSGKD SG TGEPL AY+F GP++YQ Sbjct: 975 GRFHYGTAFGEPSNLADKVEDISATLVRHGFSYSGKDFLTSGITGEPLEAYIFMGPVYYQ 1034 Query: 176 KLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMH 355 KLKHMV DKMHARARGPR +LTRQPTEGRSRDGGLRLGEMERDCLI YGASMLL+ERLM Sbjct: 1035 KLKHMVLDKMHARARGPRVVLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLLLERLMI 1094 Query: 356 SSDVFTVYACGTCGLLGYKGWCQYC------RTGAAVSALQIPYACKLLFQELQGMNVVP 517 SSD F V A GLLG+ + C RT ++ ++IPYACKLLFQELQ MN++P Sbjct: 1095 SSDQFEVRARVCVGLLGWWDAHRNCPVSPVDRTSDNMATIKIPYACKLLFQELQSMNIIP 1154 Query: 518 RLKLDD 535 RL+L D Sbjct: 1155 RLRLAD 1160 [130][TOP] >UniRef100_A1D510 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1D510_NEOFI Length = 1200 Score = 230 bits (586), Expect = 6e-59 Identities = 111/175 (63%), Positives = 127/175 (72%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G GT F G +E+ + L+ G+SY GKD SG TGE L YVF GPI+YQKLKHM Sbjct: 1018 GHHGYGTCFGGTPVEEASRILIDHGFSYGGKDYLTSGITGEALPFYVFTGPIYYQKLKHM 1077 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD Sbjct: 1078 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1137 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 + C CG +GY WCQ C++ +V + IPYA KLL QEL MNV RLKLDD Sbjct: 1138 EIDVCEQCGFMGYLNWCQRCKSSRSVVKMTIPYAAKLLIQELMSMNVTARLKLDD 1192 [131][TOP] >UniRef100_A1CS37 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus RepID=A1CS37_ASPCL Length = 1246 Score = 229 bits (585), Expect = 8e-59 Identities = 110/175 (62%), Positives = 128/175 (73%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G GT F G +E+ + L+A G++Y GK+ SG TGE L YVF GPI+YQKLKHM Sbjct: 1064 GHHGYGTCFGGTPVEETSRTLIAHGFNYGGKEYLTSGITGEALPFYVFTGPIYYQKLKHM 1123 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD Sbjct: 1124 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1183 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 + C CG +GY WCQ C++ +V + IPYA KLL QEL MNV RLKLDD Sbjct: 1184 EIDVCEQCGFMGYLNWCQRCKSSRSVVKMTIPYAAKLLIQELMSMNVTARLKLDD 1238 [132][TOP] >UniRef100_B6QHR9 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QHR9_PENMQ Length = 1212 Score = 229 bits (584), Expect = 1e-58 Identities = 114/178 (64%), Positives = 127/178 (71%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G+ GTAF G +E + LV G+SY GKD SG TGEPL YVF GPI+YQKL Sbjct: 1027 VLSGQHGYGTAFGGSPVEQMSAILVDKGFSYGGKDYLTSGITGEPLPFYVFMGPIYYQKL 1086 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMH+R+ GPRA LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SS Sbjct: 1087 KHMVQDKMHSRSTGPRATLTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMLSS 1146 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D V C CG +GY+ WCQ CR+ V + IPYA KLL QEL MNV RLKL D Sbjct: 1147 DKHEVDICEKCGFMGYQNWCQRCRSSRGVVKMTIPYAAKLLIQELLSMNVTARLKLGD 1204 [133][TOP] >UniRef100_C8VU19 DNA-directed RNA polymerase III, beta subunit, putative (AFU_orthologue; AFUA_1G02460) n=2 Tax=Emericella nidulans RepID=C8VU19_EMENI Length = 1225 Score = 229 bits (583), Expect = 1e-58 Identities = 112/178 (62%), Positives = 127/178 (71%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G+ GT F G +E + L+ G+SY GKD SG TGE L YVF GPI+YQKL Sbjct: 1040 VLSGQHGYGTCFSGTPVEQMTQTLIDKGFSYGGKDYLTSGITGEALPFYVFTGPIYYQKL 1099 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMH+RARGPRA LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SS Sbjct: 1100 KHMVQDKMHSRARGPRATLTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISS 1159 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D V C CG +GY WCQ C++ +V + IPYA KLL QEL MNV RLKL+D Sbjct: 1160 DRHEVDVCEQCGFMGYLNWCQRCKSSRSVVKMVIPYAAKLLIQELMSMNVTARLKLED 1217 [134][TOP] >UniRef100_Q8I5X9 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7 RepID=Q8I5X9_PLAF7 Length = 1450 Score = 228 bits (582), Expect = 2e-58 Identities = 107/174 (61%), Positives = 133/174 (76%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+++ G+ F G E+ AE L G++ S K++ YSG TGEPL Y+F GPI+YQKL Sbjct: 1272 VMDGEYKYGSIFSGTPFEEIAEILFRYGFNCSSKELLYSGLTGEPLETYIFMGPIYYQKL 1331 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DK+HARARGPR LLTRQPTEGRS++GGLRLGEMERDCLI YG S LL+ERLM SS Sbjct: 1332 KHMVQDKIHARARGPRQLLTRQPTEGRSKEGGLRLGEMERDCLIAYGVSNLLLERLMLSS 1391 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 DV VY C CG++GY +C +C+ +Q+PYACKLLFQELQ MNV P++ Sbjct: 1392 DVCNVYICEDCGMMGYDLYCTFCKKCDKNIVIQMPYACKLLFQELQTMNVFPKI 1445 [135][TOP] >UniRef100_Q9P6E7 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa RepID=Q9P6E7_NEUCR Length = 1155 Score = 227 bits (579), Expect = 4e-58 Identities = 109/176 (61%), Positives = 133/176 (75%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 E + G AF +E +AL+ G+S+ GKD F SG TGEP+ AY++ GPIFYQ+LKH Sbjct: 974 EKDYGFGDAFRSHPVESMGQALIDHGFSWEGKDYFTSGITGEPMEAYIYNGPIFYQRLKH 1033 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV+DKMH+R+RGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YGAS LL+ERLM SSD Sbjct: 1034 MVQDKMHSRSRGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGASQLLLERLMISSDG 1093 Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 + C CGL GYKG+C C++ V+ + +PYACKLL QEL MNV +LKL+D Sbjct: 1094 TELDVCQECGLFGYKGYCNACKSTRNVTQMTMPYACKLLVQELISMNVGVKLKLED 1149 [136][TOP] >UniRef100_A4HBG9 DNA-directed RNA polymerase n=1 Tax=Leishmania braziliensis RepID=A4HBG9_LEIBR Length = 1125 Score = 227 bits (578), Expect = 5e-58 Identities = 108/176 (61%), Positives = 130/176 (73%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G GTAF GD + + L++ GY+Y GKD+FYSG TGE ++ YVF GPI+YQ+LKHM Sbjct: 949 GSMGDGTAFGGDSADSISRQLLSFGYNYHGKDVFYSGITGELMQGYVFFGPIYYQRLKHM 1008 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V DKMHAR+ GPR++LTRQPTEGRSR GGLR+GEMERDC++GYGAS LL ERL+ SSD+F Sbjct: 1009 VTDKMHARSTGPRSMLTRQPTEGRSRSGGLRVGEMERDCMVGYGASSLLNERLLISSDLF 1068 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDDP 538 T C CG LGY C YC+T S + +PYA KLL QELQGM V RL +D P Sbjct: 1069 TADICHVCGNLGYNNRCTYCKTKGTTSKVNMPYAFKLLIQELQGMGVSLRLTMDSP 1124 [137][TOP] >UniRef100_Q0V2J8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum RepID=Q0V2J8_PHANO Length = 1443 Score = 227 bits (578), Expect = 5e-58 Identities = 112/178 (62%), Positives = 130/178 (73%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GTAF G R+ED A+ LV+ G+SY+GKD SG TGE + Y F GPI+YQKL Sbjct: 1260 VLNGTLEYGTAFGGSRVEDMADILVSKGFSYTGKDYLTSGITGEAHQFYTFFGPIYYQKL 1319 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMHARARGPRA+LTRQPTEGR+RDGGLRLGEMERDCLI YGAS LL+ERLM SS Sbjct: 1320 KHMVQDKMHARARGPRAILTRQPTEGRARDGGLRLGEMERDCLIAYGASQLLLERLMISS 1379 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D V C CG +GY G+C+ C + AV + +PYA KLL QEL MNV + L D Sbjct: 1380 DAHNVDVCEKCGQMGYSGYCKLCESEKAVRRITMPYAAKLLIQELGSMNVKVTIGLAD 1437 [138][TOP] >UniRef100_A4R1B6 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea RepID=A4R1B6_MAGGR Length = 1158 Score = 227 bits (578), Expect = 5e-58 Identities = 109/174 (62%), Positives = 133/174 (76%) Frame = +2 Query: 14 KFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMV 193 ++ G AF +E+ +AL+ G+S+ GKD F SG TGEPL AY+F GPI+YQ+LKHMV Sbjct: 979 RYGYGDAFRSHPVEEMGKALIERGFSWEGKDYFTSGITGEPLEAYLFNGPIYYQRLKHMV 1038 Query: 194 KDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFT 373 +DKMH+RA+GPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YGAS LL+ERLM SSD Sbjct: 1039 QDKMHSRAKGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGASQLLLERLMLSSDATK 1098 Query: 374 VYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 + C CGL GYKG+CQ C++ V+ + +PYA KLL QEL MNV RL L+D Sbjct: 1099 IDICQRCGLFGYKGYCQTCKSTKEVTEMTMPYAAKLLVQELISMNVGVRLVLED 1152 [139][TOP] >UniRef100_Q9BJ42 DNA-directed RNA polymerase (Fragment) n=1 Tax=Leishmania major RepID=Q9BJ42_LEIMA Length = 606 Score = 226 bits (575), Expect = 1e-57 Identities = 107/176 (60%), Positives = 131/176 (74%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G GTAF G+ + ++ L++ GY+Y GKD+FYSG TGE ++ YVF GPI+YQ+LKHM Sbjct: 430 GSMGDGTAFGGESADSISQQLLSFGYNYHGKDVFYSGITGELMQGYVFFGPIYYQRLKHM 489 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V DKMHAR+ GPR++LTRQPTEGRSR GGLR+GEMERDC++GYGAS LL ERL+ SSD+F Sbjct: 490 VTDKMHARSTGPRSMLTRQPTEGRSRSGGLRVGEMERDCMVGYGASNLLNERLLISSDMF 549 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDDP 538 T C CG LGY C YC+T S + +PYA KLL QELQGM V RL +D P Sbjct: 550 TADICHVCGNLGYNNRCTYCKTKGTTSKVNMPYAFKLLIQELQGMGVSLRLTMDSP 605 [140][TOP] >UniRef100_Q4QD43 DNA-directed RNA polymerase n=1 Tax=Leishmania major RepID=Q4QD43_LEIMA Length = 1132 Score = 226 bits (575), Expect = 1e-57 Identities = 107/176 (60%), Positives = 131/176 (74%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G GTAF G+ + ++ L++ GY+Y GKD+FYSG TGE ++ YVF GPI+YQ+LKHM Sbjct: 956 GSMGDGTAFGGESADSISQQLLSFGYNYHGKDVFYSGITGELMQGYVFFGPIYYQRLKHM 1015 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V DKMHAR+ GPR++LTRQPTEGRSR GGLR+GEMERDC++GYGAS LL ERL+ SSD+F Sbjct: 1016 VTDKMHARSTGPRSMLTRQPTEGRSRSGGLRVGEMERDCMVGYGASNLLNERLLISSDMF 1075 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDDP 538 T C CG LGY C YC+T S + +PYA KLL QELQGM V RL +D P Sbjct: 1076 TADICHVCGNLGYNNRCTYCKTKGTTSKVNMPYAFKLLIQELQGMGVSLRLTMDSP 1131 [141][TOP] >UniRef100_UPI000023E0C8 hypothetical protein FG00843.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023E0C8 Length = 1157 Score = 225 bits (573), Expect = 2e-57 Identities = 109/173 (63%), Positives = 132/173 (76%) Frame = +2 Query: 17 FRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVK 196 + G AF +E+ ++ LV G+S+ GKD F SG TGEPL AYVF GPI+YQ+LKHMV+ Sbjct: 979 YGFGDAFRSHPLEEMSQVLVDHGFSWEGKDYFTSGITGEPLEAYVFNGPIYYQRLKHMVQ 1038 Query: 197 DKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTV 376 DKMH+R+RGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YGAS LL+ERLM SSD + Sbjct: 1039 DKMHSRSRGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGASQLLLERLMISSDGTEI 1098 Query: 377 YACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 C CGL GYKG+C C++ V+ + +PYA KLL QEL MNV RL++DD Sbjct: 1099 DICQQCGLFGYKGYCHTCKSTREVTKMTMPYAAKLLVQELISMNVGVRLQMDD 1151 [142][TOP] >UniRef100_A5K0G6 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax RepID=A5K0G6_PLAVI Length = 1427 Score = 225 bits (573), Expect = 2e-57 Identities = 106/174 (60%), Positives = 133/174 (76%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+F+ G+ F G E+ A L G++ S K++ YSG TGEPL Y+F GPI+YQKL Sbjct: 1249 VLDGEFKYGSIFSGTPFEEMASILFKYGFNCSCKELLYSGLTGEPLETYIFMGPIYYQKL 1308 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DK+HARARGPR LLTRQPTEGRS++GGLRLGEMERDCLI YG S LL+ERLM SS Sbjct: 1309 KHMVQDKIHARARGPRQLLTRQPTEGRSKEGGLRLGEMERDCLIAYGVSNLLLERLMLSS 1368 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 DV VY C CG++GY +C +C+ + +++PYACKLLFQELQ MNV P++ Sbjct: 1369 DVCDVYICEDCGMMGYDTYCTFCQKCDKNALVKMPYACKLLFQELQTMNVFPKI 1422 [143][TOP] >UniRef100_B6HTA4 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6HTA4_PENCW Length = 1208 Score = 225 bits (573), Expect = 2e-57 Identities = 112/186 (60%), Positives = 132/186 (70%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G+ GT F G +++ ++ L+ G+SY GKD SG TGEPL YVF GPI+YQKL Sbjct: 1023 VLSGQHGYGTCFGGSPVQEMSQILIDKGFSYGGKDYLTSGITGEPLPFYVFTGPIYYQKL 1082 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMH+RA+GP A LTRQPTEGRSR+GGLRLGEMERDCLI YG S LL+ERLM SS Sbjct: 1083 KHMVQDKMHSRAKGPTATLTRQPTEGRSRNGGLRLGEMERDCLIAYGTSQLLLERLMISS 1142 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDDP* 541 D V C CG +GY WC C++ +V + IPYA KLL QEL MNV RLKLDD Sbjct: 1143 DRHEVDICEKCGFMGYLNWCPGCKSSRSVVKMVIPYAAKLLIQELMSMNVTARLKLDDE- 1201 Query: 542 KTQTMG 559 +TMG Sbjct: 1202 FPETMG 1207 [144][TOP] >UniRef100_Q7RNH0 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii RepID=Q7RNH0_PLAYO Length = 1323 Score = 224 bits (571), Expect = 3e-57 Identities = 104/174 (59%), Positives = 132/174 (75%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+++ G+ F G E+ AE L G+++S K++ YSG TGEPL Y+F GPI+YQKL Sbjct: 1145 VLDGEYKYGSIFSGTPFEEAAEVLFRYGFNWSCKELLYSGLTGEPLETYIFMGPIYYQKL 1204 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DK+HAR+RGPR LLTRQPTEGRS++GGLRLGEMERDCLI YG S LL+ERLM SS Sbjct: 1205 KHMVQDKIHARSRGPRQLLTRQPTEGRSKEGGLRLGEMERDCLIAYGVSNLLLERLMLSS 1264 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 DV Y C CG++GY C +C+ +++PYACKLLFQELQ MNV P++ Sbjct: 1265 DVCDAYICEDCGMMGYDSCCTFCKKYDKNVVVKMPYACKLLFQELQTMNVFPKI 1318 [145][TOP] >UniRef100_C9SKJ8 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SKJ8_9PEZI Length = 1105 Score = 224 bits (571), Expect = 3e-57 Identities = 109/173 (63%), Positives = 132/173 (76%) Frame = +2 Query: 17 FRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVK 196 + G AF ++ +EALV G+S+ GKD F SG TGEPL AY+F GPI+YQ+LKHMV+ Sbjct: 926 YGFGDAFRSHPLKQMSEALVDHGFSWEGKDYFTSGITGEPLEAYIFNGPIYYQRLKHMVQ 985 Query: 197 DKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTV 376 DKMH+RARGPRA+LTRQPTEGRSR+GGLRLGEMERDCLI YGAS LL+ERLM SSD + Sbjct: 986 DKMHSRARGPRAILTRQPTEGRSREGGLRLGEMERDCLIAYGASQLLLERLMISSDGTEI 1045 Query: 377 YACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 C CGL GYKG+C CR+ V+ + +PYA KLL QEL MNV RL+++D Sbjct: 1046 DICQQCGLFGYKGYCHTCRSTKEVTKMTMPYAAKLLVQELISMNVGVRLQMED 1098 [146][TOP] >UniRef100_B3LB54 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H RepID=B3LB54_PLAKH Length = 1401 Score = 224 bits (570), Expect = 4e-57 Identities = 105/174 (60%), Positives = 132/174 (75%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+ + G+ F G E+ A L G++ S K++ YSG TGEPL Y+F GPI+YQKL Sbjct: 1223 VLDGELKYGSIFSGTPFEEMASILFKYGFNCSSKELLYSGLTGEPLETYIFMGPIYYQKL 1282 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DK+HARARGPR LLTRQPTEGRS++GGLRLGEMERDCLI YG S LL+ERLM SS Sbjct: 1283 KHMVQDKIHARARGPRQLLTRQPTEGRSKEGGLRLGEMERDCLIAYGVSNLLLERLMLSS 1342 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 DV VY C CG++GY +C +C+ + +++PYACKLLFQELQ MNV P++ Sbjct: 1343 DVCDVYICEDCGMMGYDTYCTFCQKCDKNALVKMPYACKLLFQELQTMNVFPKI 1396 [147][TOP] >UniRef100_A7AM79 DNA-directed RNA polymerase, beta subunit, putative n=1 Tax=Babesia bovis RepID=A7AM79_BABBO Length = 1171 Score = 224 bits (570), Expect = 4e-57 Identities = 106/178 (59%), Positives = 128/178 (71%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G F GT F+ D + +L+ G+ +GK++ YSG TGEPL +F GP++YQKL Sbjct: 990 VLNGIFEDGTPFEADSLPAIERSLIKKGFHPAGKEILYSGITGEPLETLIFTGPMYYQKL 1049 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DK+HARA GPR LTRQPTEGRS+DGGLRLGEMERDCLI YGAS LL+ERLM SS Sbjct: 1050 KHMVSDKIHARAVGPRQSLTRQPTEGRSKDGGLRLGEMERDCLIAYGASGLLVERLMLSS 1109 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 DVF + C CG +GY GWC YC+ + + IPYACKLLFQELQ MN+ P + L + Sbjct: 1110 DVFQMDVCHQCGFIGYDGWCAYCKQRGQTATVAIPYACKLLFQELQAMNIRPNVILKE 1167 [148][TOP] >UniRef100_Q6E6F3 DNA-directed RNA polymerase n=1 Tax=Antonospora locustae RepID=Q6E6F3_ANTLO Length = 1014 Score = 223 bits (569), Expect = 6e-57 Identities = 108/176 (61%), Positives = 129/176 (73%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G+ T F D ED + L+ GYSY GKD F +G TG+ YVF GP++YQ+L Sbjct: 838 VFTGRQSDATVFREDITEDLSHILIKHGYSYCGKDTFTNGITGDVYEGYVFFGPVYYQRL 897 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DKMHAR+RGPRA+LTRQPTEG+SR+GGLRLGEMERDCLIGYGAS +L ERLM SS Sbjct: 898 KHMVADKMHARSRGPRAMLTRQPTEGKSREGGLRLGEMERDCLIGYGASAILCERLMISS 957 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 DVF Y C CG++ YK C C+ G V + +PYACKLLFQEL MN++PR+KL Sbjct: 958 DVFRAYICHRCGIIVYKNMCTLCKRGDPV-PVDMPYACKLLFQELMSMNILPRIKL 1012 [149][TOP] >UniRef100_Q2GW04 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum RepID=Q2GW04_CHAGB Length = 1155 Score = 223 bits (568), Expect = 8e-57 Identities = 110/176 (62%), Positives = 133/176 (75%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 E + G AF +E+ + LV G+S+ GKD F SG TGEP AY+F GPI+YQ+LKH Sbjct: 974 ERDYGFGDAFRSHPVEEMGKVLVEHGFSWEGKDYFTSGITGEPHEAYLFNGPIYYQRLKH 1033 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV+DKMH+R+RGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YGAS LL+ERLM SSD Sbjct: 1034 MVQDKMHSRSRGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGASQLLLERLMISSDG 1093 Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 V C CGLLGYKG+CQ C + + V+ + +PYA KLL QEL MNV R++L+D Sbjct: 1094 TQVDICELCGLLGYKGFCQTCGSTSQVTQMTMPYAAKLLVQELISMNVGVRMQLED 1149 [150][TOP] >UniRef100_Q4Z2F1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Plasmodium berghei RepID=Q4Z2F1_PLABE Length = 446 Score = 223 bits (567), Expect = 1e-56 Identities = 104/174 (59%), Positives = 132/174 (75%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+++ G+ F G E+ AE L G+++S K++ YSG TGEPL Y+F GPI+YQKL Sbjct: 268 VLDGEYKYGSIFSGTPFEEAAEVLFRYGFNWSCKELLYSGLTGEPLETYIFMGPIYYQKL 327 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DK+HAR+RGPR LLTRQPTEGRS++GGLRLGEMERDCLI YG S LL+ERLM SS Sbjct: 328 KHMVQDKIHARSRGPRQLLTRQPTEGRSKEGGLRLGEMERDCLIAYGVSNLLLERLMLSS 387 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 DV Y C CG++GY C +C+ +++PYACKLLFQELQ MNV P++ Sbjct: 388 DVCDTYICEDCGMMGYDLCCTFCKKYDKNVVVKMPYACKLLFQELQTMNVFPKI 441 [151][TOP] >UniRef100_B9IDF9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IDF9_POPTR Length = 1141 Score = 222 bits (565), Expect = 2e-56 Identities = 112/190 (58%), Positives = 132/190 (69%), Gaps = 17/190 (8%) Frame = +2 Query: 11 GKFRMGTAFD-----GDRIE------DCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFA 157 G+F G+AF DR+E E LV G+SY+GKD YSG TG PL+AY+F Sbjct: 949 GRFHYGSAFGEPSGHADRVEAIRHFLSLIETLVKHGFSYNGKDFIYSGITGCPLQAYIFM 1008 Query: 158 GPIFYQKLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL 337 GPI+YQKLKHMV DKMHAR GPR +LTRQPT+GR+R+GGLR+GEME+DCL+ YG SMLL Sbjct: 1009 GPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTDGRARNGGLRVGEMEKDCLVAYGTSMLL 1068 Query: 338 MERLMHSSDVFTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQ 499 ERLM SSD F C CGLLGY C C+ G VS +++PYACKLL QELQ Sbjct: 1069 YERLMVSSDQFEAQVCRACGLLGYYNQKLKAAMCTTCKNGDKVSTMKLPYACKLLIQELQ 1128 Query: 500 GMNVVPRLKL 529 MN+VPRLKL Sbjct: 1129 SMNIVPRLKL 1138 [152][TOP] >UniRef100_C4QD48 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni RepID=C4QD48_SCHMA Length = 1126 Score = 221 bits (564), Expect = 2e-56 Identities = 103/175 (58%), Positives = 130/175 (74%), Gaps = 1/175 (0%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EGK R G+AF GD E ++ L+ GY Y GK++ YSG TG PL A+++ GP++YQ+LKH Sbjct: 939 EGKIRDGSAFSGDPAEVLSQVLIDHGYHYLGKEILYSGVTGAPLEAFIYFGPVYYQRLKH 998 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV DK+HAR+RGP LTRQPTEGRSR+GGLR+GEMERDC I YG S LL+ERL+ SSD Sbjct: 999 MVMDKVHARSRGPVTALTRQPTEGRSREGGLRVGEMERDCFIAYGTSQLLLERLLLSSDA 1058 Query: 368 FTVYACGTCGLLGYK-GWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 + C CGLL WCQYCR+ V ++++PYACKLLFQEL M ++PRL+L Sbjct: 1059 YDACVCEKCGLLATSPNWCQYCRSSRQVVSVRMPYACKLLFQELMCMRILPRLRL 1113 [153][TOP] >UniRef100_C4QD47 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni RepID=C4QD47_SCHMA Length = 1128 Score = 221 bits (564), Expect = 2e-56 Identities = 103/175 (58%), Positives = 130/175 (74%), Gaps = 1/175 (0%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EGK R G+AF GD E ++ L+ GY Y GK++ YSG TG PL A+++ GP++YQ+LKH Sbjct: 941 EGKIRDGSAFSGDPAEVLSQVLIDHGYHYLGKEILYSGVTGAPLEAFIYFGPVYYQRLKH 1000 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV DK+HAR+RGP LTRQPTEGRSR+GGLR+GEMERDC I YG S LL+ERL+ SSD Sbjct: 1001 MVMDKVHARSRGPVTALTRQPTEGRSREGGLRVGEMERDCFIAYGTSQLLLERLLLSSDA 1060 Query: 368 FTVYACGTCGLLGYK-GWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 + C CGLL WCQYCR+ V ++++PYACKLLFQEL M ++PRL+L Sbjct: 1061 YDACVCEKCGLLATSPNWCQYCRSSRQVVSVRMPYACKLLFQELMCMRILPRLRL 1115 [154][TOP] >UniRef100_C7YHY2 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7YHY2_NECH7 Length = 1156 Score = 220 bits (560), Expect = 6e-56 Identities = 105/173 (60%), Positives = 132/173 (76%) Frame = +2 Query: 17 FRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVK 196 + G AF +E+ ++ LV G+S+ GKD F SG TGEPL AY+F GPI+YQ+LKHMV+ Sbjct: 978 YGFGDAFRSHPLEEMSKVLVDHGFSWEGKDYFTSGVTGEPLEAYIFNGPIYYQRLKHMVQ 1037 Query: 197 DKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTV 376 DKMH+R+RGP+A+LTRQPTEGRSR+GGLRLGEMERDCLI YGAS LL+ERLM SSD + Sbjct: 1038 DKMHSRSRGPKAILTRQPTEGRSREGGLRLGEMERDCLIAYGASQLLLERLMISSDGTEI 1097 Query: 377 YACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 C CGL GYKG+C C++ V+ + +PYA KLL QEL MNV RL+++D Sbjct: 1098 DICQQCGLFGYKGYCHTCKSTREVTKMTMPYAAKLLVQELISMNVGVRLQMED 1150 [155][TOP] >UniRef100_C4V6K7 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01 RepID=C4V6K7_NOSCE Length = 1091 Score = 218 bits (555), Expect = 2e-55 Identities = 102/176 (57%), Positives = 131/176 (74%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EGK T F + ++ + L G+++ GKD FYSG +GEP+ AY+F GP+FYQ+LKH Sbjct: 917 EGKISDATIFKKNEVDLVCDILSNNGFNFGGKDCFYSGISGEPIYAYIFYGPVFYQRLKH 976 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV DK+H RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGAS L++ERLM SSD+ Sbjct: 977 MVADKIHMRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIGYGASSLIVERLMESSDL 1036 Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 F + C CG+L K C C + +++PYACKLLFQEL MN++P+L +++ Sbjct: 1037 FETFCCKNCGILVPKNGCNVCNDTNPL-PIRLPYACKLLFQELMSMNILPKLNVNN 1091 [156][TOP] >UniRef100_C0SI08 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SI08_PARBP Length = 1232 Score = 217 bits (553), Expect = 4e-55 Identities = 111/175 (63%), Positives = 124/175 (70%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G+F GTAF G +E+ + LV G+SY GKD SG TGE L AYVF GPI+YQKLKHM Sbjct: 1065 GQFSYGTAFGGSPVEEMSAVLVKHGFSYGGKDCLTSGITGESLPAYVFMGPIYYQKLKHM 1124 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD + Sbjct: 1125 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDQY 1184 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 V C +CG +GY GWCQ KLL QEL MNVV RLKL D Sbjct: 1185 EVDVCESCGFMGYSGWCQ---------------RSKLLVQELFSMNVVARLKLAD 1224 [157][TOP] >UniRef100_C5KAB2 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KAB2_9ALVE Length = 1140 Score = 213 bits (543), Expect = 6e-54 Identities = 106/178 (59%), Positives = 129/178 (72%), Gaps = 1/178 (0%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+ GTAF G E ++L+ G+ S K+ SG TGE L Y+F GPI+YQKL Sbjct: 961 VLDGERSYGTAFGGTTKEHMTQSLIRHGFHPSAKEYITSGVTGEALECYIFVGPIYYQKL 1020 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DK+HAR+ GP LTRQPTEGR++DGGLRLGEMERDCL+ YGAS LL+ERLM SS Sbjct: 1021 KHMVMDKIHARSTGPVNQLTRQPTEGRAKDGGLRLGEMERDCLVAYGASNLLLERLMLSS 1080 Query: 362 DVFTVYACGTCGLLGYK-GWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 DVFT C CGLL Y+ G C+ C T + +++PYACKLLFQELQ MNV PRLK++ Sbjct: 1081 DVFTASVCRRCGLLSYQNGTCKLCGTSENIVDIRMPYACKLLFQELQAMNVCPRLKVE 1138 [158][TOP] >UniRef100_C5K7V0 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5K7V0_9ALVE Length = 1159 Score = 213 bits (543), Expect = 6e-54 Identities = 106/178 (59%), Positives = 129/178 (72%), Gaps = 1/178 (0%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V +G+ GTAF G E ++L+ G+ S K+ SG TGE L Y+F GPI+YQKL Sbjct: 980 VLDGERSYGTAFGGTTKEHMTQSLIRHGFHPSAKEYITSGVTGEALECYIFVGPIYYQKL 1039 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DK+HAR+ GP LTRQPTEGR++DGGLRLGEMERDCL+ YGAS LL+ERLM SS Sbjct: 1040 KHMVMDKIHARSTGPVNQLTRQPTEGRAKDGGLRLGEMERDCLVAYGASNLLLERLMLSS 1099 Query: 362 DVFTVYACGTCGLLGYK-GWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 DVFT C CGLL Y+ G C+ C T + +++PYACKLLFQELQ MNV PRLK++ Sbjct: 1100 DVFTASVCRRCGLLSYQNGTCKLCGTSENIVDIRMPYACKLLFQELQAMNVCPRLKVE 1157 [159][TOP] >UniRef100_B7XI25 DNA-directed RNA polymerase n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XI25_ENTBH Length = 1107 Score = 213 bits (542), Expect = 8e-54 Identities = 99/156 (63%), Positives = 123/156 (78%) Frame = +2 Query: 65 EALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPRALLTR 244 + L+ GYSYSGKD+F SG TGE AY+F GPIFYQ+LKHMV DK+H R+RGPRA+LTR Sbjct: 952 QILIDHGYSYSGKDVFTSGITGEQFEAYIFFGPIFYQRLKHMVADKIHCRSRGPRAVLTR 1011 Query: 245 QPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGYKGWCQ 424 QPTEGRS+DGGLRLGEMERDCLIGYGA+ LL ERLMH SD F + C TCG++ YK C Sbjct: 1012 QPTEGRSKDGGLRLGEMERDCLIGYGANSLLNERLMHCSDEFDAFICETCGIICYKERCY 1071 Query: 425 YCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 +C + +++PYACKLLFQE+ MN++P++ L+ Sbjct: 1072 WCSKKPII--VKMPYACKLLFQEMMAMNILPKIILE 1105 [160][TOP] >UniRef100_Q9FKF1 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana RepID=Q9FKF1_ARATH Length = 1194 Score = 211 bits (537), Expect = 3e-53 Identities = 101/171 (59%), Positives = 125/171 (73%), Gaps = 11/171 (6%) Frame = +2 Query: 11 GKFRMGTAFD-----GDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQ 175 G+F G+AF D++E + LV G+SYSGKD+ YSG +GEP+ AY+F GPI+YQ Sbjct: 985 GRFHYGSAFGERSGHADKVETISATLVEKGFSYSGKDLLYSGISGEPVEAYIFMGPIYYQ 1044 Query: 176 KLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMH 355 KLKHMV DKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGASML+ ERLM Sbjct: 1045 KLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERLMI 1104 Query: 356 SSDVFTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQ 490 SSD F V C CGLLGY K C C+ G ++ +++PYACKLLFQ Sbjct: 1105 SSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 1155 [161][TOP] >UniRef100_Q236N3 DNA-directed RNA polymerase n=1 Tax=Tetrahymena thermophila SB210 RepID=Q236N3_TETTH Length = 1141 Score = 209 bits (531), Expect = 1e-52 Identities = 102/178 (57%), Positives = 131/178 (73%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G+F+ GTAF GD++ D + LV G+SY+GKD+ SG TGE ++ YVF GP+FYQ+L Sbjct: 958 VLSGQFKYGTAFGGDKMADLSSILVQNGFSYTGKDVIISGITGEYMQCYVFCGPVFYQRL 1017 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DK+HARA+G LTRQPTEGR++DGGLRLGEMERD L+ + +S LL+ERLM SS Sbjct: 1018 KHMVADKVHARAKGRVTTLTRQPTEGRAKDGGLRLGEMERDSLLAFASSNLLIERLMISS 1077 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 D F+V C CG + + C+ C+T VS + +PYACKLLFQEL MN+ P+L L D Sbjct: 1078 DKFSVQVCEKCGFIQHTNSCKMCQTD-QVSKVVMPYACKLLFQELLSMNIKPKLNLVD 1134 [162][TOP] >UniRef100_Q4MYU5 DNA-directed RNA polymerase n=1 Tax=Theileria parva RepID=Q4MYU5_THEPA Length = 1244 Score = 205 bits (521), Expect = 2e-51 Identities = 92/160 (57%), Positives = 122/160 (76%) Frame = +2 Query: 44 DRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARG 223 +++ D + L+ G+ GK++ YSG +G P+ +F GPI+YQ+LKHMV DK+HAR RG Sbjct: 1081 NKMSDICDILIKNGFHPKGKEILYSGISGNPINTLIFIGPIYYQRLKHMVTDKIHARGRG 1140 Query: 224 PRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLL 403 PR +TRQPTEGRSRDGGLRLGEMERDCLI YG+S LL+ERLM SSDVF + C +CG + Sbjct: 1141 PRQPITRQPTEGRSRDGGLRLGEMERDCLIAYGSSNLLVERLMLSSDVFNIEVCSSCGFM 1200 Query: 404 GYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 GY +C++C+ +++ + +PYACKLLFQELQ MN+ P L Sbjct: 1201 GYNNFCKFCQNN-SLAQVSLPYACKLLFQELQAMNIRPSL 1239 [163][TOP] >UniRef100_A0D7M6 DNA-directed RNA polymerase n=1 Tax=Paramecium tetraurelia RepID=A0D7M6_PARTE Length = 1131 Score = 204 bits (520), Expect = 3e-51 Identities = 98/174 (56%), Positives = 122/174 (70%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EGKF+ GTAF G+ + E L+ G+ Y GKD SG TGE + YV+ GPIFYQ+LKH Sbjct: 947 EGKFKYGTAFGGENVLQVGEELLKRGFHYQGKDCLISGITGEYMECYVYQGPIFYQRLKH 1006 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV DK+HARA+GP LTRQP EGR++DGG R+GEMERDC + YGAS LL+ERL+ SSD Sbjct: 1007 MVIDKIHARAKGPMEKLTRQPVEGRAKDGGQRIGEMERDCFLAYGASNLLIERLLISSDP 1066 Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 F VY C CG+ C+ C T V +++PY CKLLFQEL MN+ P+L+L Sbjct: 1067 FNVYVCEICGMFKSDSVCRGCNTD-KVYQIRLPYCCKLLFQELLAMNIKPKLQL 1119 [164][TOP] >UniRef100_Q4UB41 DNA-directed RNA polymerase n=1 Tax=Theileria annulata RepID=Q4UB41_THEAN Length = 1244 Score = 204 bits (519), Expect = 4e-51 Identities = 93/160 (58%), Positives = 120/160 (75%) Frame = +2 Query: 44 DRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARG 223 D + D L+ G+ GK++ YSG +G P+ +F GPI+YQ+LKHMV DK+HAR RG Sbjct: 1081 DNMSDICNILIKNGFHPKGKEILYSGISGNPINTLIFIGPIYYQRLKHMVTDKIHARGRG 1140 Query: 224 PRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLL 403 PR +TRQPTEGRSRDGGLRLGEMERDCLI YG+S LL+ERLM SSDVF + C +CG + Sbjct: 1141 PRQPITRQPTEGRSRDGGLRLGEMERDCLIAYGSSNLLIERLMLSSDVFNIEICTSCGFM 1200 Query: 404 GYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 GY +C++C+ +++ + +PYACKLLFQELQ MN+ P L Sbjct: 1201 GYNNFCKFCQNN-SLAQVSLPYACKLLFQELQAMNIRPSL 1239 [165][TOP] >UniRef100_C6LZ34 DNA-directed RNA polymerase n=1 Tax=Giardia intestinalis ATCC 50581 RepID=C6LZ34_GIALA Length = 1239 Score = 199 bits (505), Expect = 2e-49 Identities = 97/173 (56%), Positives = 122/173 (70%), Gaps = 4/173 (2%) Frame = +2 Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208 T D + I + ++L AAG+SYSGKD+ YSG TG+ + Y+F GPI+YQKLKHMVKDK+H Sbjct: 1065 TKTDEEFIAELYDSLRAAGFSYSGKDVLYSGLTGDVIPVYIFNGPIYYQKLKHMVKDKIH 1124 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 +R GP +LTRQPTEGR GGLR+GEMERDC I YGAS LL+ER M SSD F Y C Sbjct: 1125 SRGTGPITMLTRQPTEGRRVHGGLRMGEMERDCAISYGASALLLERFMLSSDEFLAYVCE 1184 Query: 389 TCGLLGYKG----WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 CGL Y+ WC C++G V ++IPYA KL+ QEL M V+ R++L+D Sbjct: 1185 ACGLFSYERNGALWCPTCQSGKDVVKIRIPYAAKLMIQELISMGVLVRMQLED 1237 [166][TOP] >UniRef100_A8B2N4 DNA-directed RNA polymerase n=1 Tax=Giardia lamblia ATCC 50803 RepID=A8B2N4_GIALA Length = 1238 Score = 197 bits (500), Expect = 6e-49 Identities = 96/173 (55%), Positives = 121/173 (69%), Gaps = 4/173 (2%) Frame = +2 Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208 T D + + ++L AG+SYSGKD+ YSG TG+ + Y+F GPI+YQKLKHMVKDK+H Sbjct: 1064 TKTDETFLAELYDSLRVAGFSYSGKDVLYSGLTGDVIPVYIFNGPIYYQKLKHMVKDKIH 1123 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 +R GP +LTRQPTEGR GGLR+GEMERDC I YGAS LL+ER M SSD F Y C Sbjct: 1124 SRGTGPITMLTRQPTEGRRVHGGLRMGEMERDCAISYGASALLLERFMLSSDDFLAYVCE 1183 Query: 389 TCGLLGYKG----WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 TCGL Y+ WC C++G V ++IPYA KL+ QEL M V+ R++L+D Sbjct: 1184 TCGLFSYEKNGVLWCPTCQSGKDVVKIRIPYAAKLMIQELISMGVLVRMQLED 1236 [167][TOP] >UniRef100_Q8SR75 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Encephalitozoon cuniculi RepID=RPB2_ENCCU Length = 1141 Score = 187 bits (476), Expect = 4e-46 Identities = 91/173 (52%), Positives = 116/173 (67%), Gaps = 4/173 (2%) Frame = +2 Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208 T F G ++ + L + G+ G ++ Y+G TG LRA +F GP +YQ+LKHMV DK+H Sbjct: 969 TPFSGVTVDGISSRLKSYGFQQRGLEVMYNGMTGRKLRAQMFFGPTYYQRLKHMVDDKIH 1028 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 ARARGP +LTRQP EGRSRDGGLR GEMERDC+I +GAS L ERLM SD ++ Y C Sbjct: 1029 ARARGPLQILTRQPVEGRSRDGGLRFGEMERDCIISHGASAFLKERLMDVSDAYSCYVCD 1088 Query: 389 TCGLLGYKG----WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 CGLL G C+ C VS ++IPYA KLL QEL GMN+ PR++ ++ Sbjct: 1089 FCGLLAMGGSKVNECKGCNNTTNVSMVEIPYAFKLLIQELMGMNIAPRIRFEE 1141 [168][TOP] >UniRef100_A0RXX0 DNA-directed RNA polymerase, beta subunit/140 kD subunit n=1 Tax=Cenarchaeum symbiosum RepID=A0RXX0_CENSY Length = 1115 Score = 187 bits (475), Expect = 5e-46 Identities = 91/176 (51%), Positives = 120/176 (68%), Gaps = 6/176 (3%) Frame = +2 Query: 26 GTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKM 205 G+AF G+++E+ E + AG+ YSGK++ Y G TG+ VF G ++YQKL HMV DK+ Sbjct: 938 GSAFVGEKMEEVREVMDTAGFKYSGKEIMYDGRTGKAFPVEVFIGVVYYQKLHHMVADKI 997 Query: 206 HARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYAC 385 HARARG +LT+QPTEGR+R GGLR GEMERDCLI YGASM+L +RL+ SD +Y C Sbjct: 998 HARARGQVQMLTKQPTEGRARGGGLRFGEMERDCLIAYGASMILKDRLLDESDKSDIYVC 1057 Query: 386 GTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 CGL+ Y K C+ C A VS++ + YA KLL QE+Q +NV PRL + + Sbjct: 1058 ERCGLVAYHDVKQRKYVCRVCGDKAKVSSVSVAYAFKLLLQEMQSLNVAPRLLIKE 1113 [169][TOP] >UniRef100_Q9CSL3 Putative uncharacterized protein (Fragment) n=1 Tax=Mus musculus RepID=Q9CSL3_MOUSE Length = 112 Score = 186 bits (473), Expect = 8e-46 Identities = 87/107 (81%), Positives = 95/107 (88%) Frame = +2 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 ARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SSD F V CG Sbjct: 1 ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG 60 Query: 389 TCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL Sbjct: 61 QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 107 [170][TOP] >UniRef100_A9A459 DNA-directed RNA polymerase n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=A9A459_NITMS Length = 1115 Score = 184 bits (468), Expect = 3e-45 Identities = 91/181 (50%), Positives = 122/181 (67%), Gaps = 6/181 (3%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 GK G+AF G+++++ E + A G+ YSGK++ Y G TG+ VF G ++YQKL HM Sbjct: 933 GKRFDGSAFVGEKMDEVREVMDAHGFEYSGKEIMYDGRTGKSFPVEVFIGVVYYQKLHHM 992 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V DK+HARARG +LT+QPTEGR+R GGLR GEMERDCLI YGASM+L +RL+ SD Sbjct: 993 VADKIHARARGQVQMLTKQPTEGRARGGGLRFGEMERDCLIAYGASMILKDRLLDESDKS 1052 Query: 371 TVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 ++ C CGL+ Y K C+ C A VS++ + YA KLL QE+Q +NV PRL + Sbjct: 1053 DIFVCERCGLVAYHDVKQRKYVCRVCGDKAKVSSVSVAYAFKLLLQEMQSLNVAPRLLIK 1112 Query: 533 D 535 + Sbjct: 1113 E 1113 [171][TOP] >UniRef100_B2W234 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2W234_PYRTR Length = 1167 Score = 184 bits (467), Expect = 4e-45 Identities = 94/178 (52%), Positives = 114/178 (64%) Frame = +2 Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 V G GTAF G +ED ++ LV G+SY+GKD SG TGE + Y F GPI+YQKL Sbjct: 1008 VLNGTLEYGTAFGGSTVEDMSKILVDKGFSYTGKDYLTSGITGEAHQFYTFFGPIYYQKL 1067 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV+DKMH+RARGPRA+LTRQPTEGR+RDGGLRLGEMERDCLI YG Sbjct: 1068 KHMVQDKMHSRARGPRAILTRQPTEGRARDGGLRLGEMERDCLIAYG------------- 1114 Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 G +GY G+C+ C + AV + +PYA KLL QEL MN+ + L+D Sbjct: 1115 -----------GQMGYSGYCKLCESEKAVRKITMPYAAKLLIQELGSMNIKVTIGLED 1161 [172][TOP] >UniRef100_Q4Z396 Putative uncharacterized protein n=1 Tax=Plasmodium berghei RepID=Q4Z396_PLABE Length = 209 Score = 182 bits (463), Expect = 1e-44 Identities = 90/184 (48%), Positives = 119/184 (64%), Gaps = 8/184 (4%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EG T F +++ +E L GY G D+ Y+G G+ L + +F GP FYQ+LKH Sbjct: 27 EGGEGDATPFSKITVQEISERLHRLGYEKYGNDILYNGHNGKMLTSKIFIGPTFYQRLKH 86 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV+DK+HAR+RGP ++TRQPTEGRSRDGGLR GEMERDC+I +G++ +L ERL SD Sbjct: 87 MVEDKIHARSRGPLTMITRQPTEGRSRDGGLRFGEMERDCMISHGSAKMLKERLFEESDA 146 Query: 368 FTVYACGTCGLL--------GYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 + V+ C TCGL Y+ C C + +S + IPYACKLLFQEL M + P+L Sbjct: 147 YRVHVCDTCGLCCVADINKNAYE--CTICNSKTNISQIYIPYACKLLFQELMTMAIYPKL 204 Query: 524 KLDD 535 L+D Sbjct: 205 VLED 208 [173][TOP] >UniRef100_A9UUX4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis RepID=A9UUX4_MONBE Length = 1166 Score = 181 bits (460), Expect = 3e-44 Identities = 91/183 (49%), Positives = 115/183 (62%), Gaps = 6/183 (3%) Frame = +2 Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184 H G T F + D A+ L + G ++ Y+G TG ++A VF GP +YQ+LK Sbjct: 981 HSGTIGDATPFTKVNVTDVADILEGYNFQRYGNEVMYNGFTGRKMQAQVFLGPTYYQRLK 1040 Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364 HMV DK+HARARGP LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD Sbjct: 1041 HMVDDKIHARARGPLQNLTRQPMEGRSRDGGLRFGEMERDCMIAHGAAQFLRERLFEVSD 1100 Query: 365 VFTVYACGTCG------LLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526 ++++ C CG L + C CR VS +++PYACKLLFQEL M+VVPR+ Sbjct: 1101 PYSLHVCDVCGLPCVAKLEKNEFECTRCRNSTRVSRIRLPYACKLLFQELMTMSVVPRMM 1160 Query: 527 LDD 535 DD Sbjct: 1161 TDD 1163 [174][TOP] >UniRef100_Q1L5Z3 DNA-directed RNA polymerase n=1 Tax=Antirrhinum majus RepID=Q1L5Z3_ANTMA Length = 1198 Score = 181 bits (459), Expect = 3e-44 Identities = 88/183 (48%), Positives = 115/183 (62%), Gaps = 6/183 (3%) Frame = +2 Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184 H GK T F +++ ++AL GY G + Y+G TG PL + +F GP +YQ+LK Sbjct: 1004 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRPLTSMIFLGPTYYQRLK 1063 Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364 HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD Sbjct: 1064 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1123 Query: 365 VFTVYACGTCGLLG------YKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526 + V+ C CGL+G + C+ C+ + + IPYACKLL QEL M + PRL Sbjct: 1124 AYRVHVCERCGLMGIANLKKHSYECRSCKNKTDIVQIYIPYACKLLIQELMSMAIAPRLL 1183 Query: 527 LDD 535 +D Sbjct: 1184 TND 1186 [175][TOP] >UniRef100_C4V8X8 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01 RepID=C4V8X8_NOSCE Length = 1143 Score = 181 bits (459), Expect = 3e-44 Identities = 88/172 (51%), Positives = 114/172 (66%), Gaps = 4/172 (2%) Frame = +2 Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208 T F+G +++ +E L Y G ++ Y+G TG LRA ++ GP +YQ+LKHMV DK+H Sbjct: 972 TPFNGVTVDNISEKLKEYNYQQRGFEVMYNGMTGHKLRAQIYIGPTYYQRLKHMVDDKIH 1031 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 ARA+GP +LTRQP EGRSRDGGLR GEMERDC+I +GAS L ERLM SD +T C Sbjct: 1032 ARAKGPLQILTRQPVEGRSRDGGLRFGEMERDCIISHGASAFLKERLMDVSDPYTCCICD 1091 Query: 389 TCGLLGYK----GWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 CGL+ C+ C +S ++IPYA KLL QEL GMN+ PR+K + Sbjct: 1092 LCGLIAIDTKRYNECKGCNNRTNLSLVEIPYAFKLLIQELMGMNIAPRIKTE 1143 [176][TOP] >UniRef100_Q7RQI2 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii RepID=Q7RQI2_PLAYO Length = 1312 Score = 180 bits (457), Expect = 6e-44 Identities = 89/184 (48%), Positives = 118/184 (64%), Gaps = 8/184 (4%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EG T F +++ +E L GY G D+ Y+G G+ L + +F GP FYQ+LKH Sbjct: 1130 EGGEGDATPFSKITVQEISERLHRLGYEKYGNDILYNGHNGKMLTSKIFIGPTFYQRLKH 1189 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV+DK+HAR+RGP ++TRQPTEGRSRDGGLR GEMERDC+I +G++ +L ERL SD Sbjct: 1190 MVEDKIHARSRGPLTMITRQPTEGRSRDGGLRFGEMERDCMISHGSAKMLKERLFEESDA 1249 Query: 368 FTVYACGTCGLL--------GYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 + V+ C CGL Y+ C C + +S + IPYACKLLFQEL M + P+L Sbjct: 1250 YRVHVCDICGLCCVADINKNAYE--CTICNSKTNISQIYIPYACKLLFQELMTMAIYPKL 1307 Query: 524 KLDD 535 L+D Sbjct: 1308 VLED 1311 [177][TOP] >UniRef100_A5KBW7 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax RepID=A5KBW7_PLAVI Length = 1339 Score = 180 bits (457), Expect = 6e-44 Identities = 87/184 (47%), Positives = 120/184 (65%), Gaps = 8/184 (4%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EG T F +++ ++ L + GY G D+ Y+G G+ L++ +F GP +YQ+LKH Sbjct: 1157 EGGEGDATPFSRITVQEISQRLHSLGYEKYGNDVLYNGHNGKMLKSKIFIGPTYYQRLKH 1216 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV+DK+HAR+RGP ++TRQPTEGRSRDGGLR GEMERDC+I +G++ +L ERL SD Sbjct: 1217 MVEDKIHARSRGPLTMITRQPTEGRSRDGGLRFGEMERDCMISHGSAKMLKERLFEESDA 1276 Query: 368 FTVYACGTCGLL--------GYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 + V+ C CGL Y+ C C + +S + IPYACKLLFQEL M + P+L Sbjct: 1277 YRVHVCDNCGLCCIADINKNAYE--CTVCNSKTNISQIYIPYACKLLFQELMTMAIYPKL 1334 Query: 524 KLDD 535 L+D Sbjct: 1335 VLED 1338 [178][TOP] >UniRef100_B1YC24 DNA-directed RNA polymerase n=1 Tax=Thermoproteus neutrophilus V24Sta RepID=B1YC24_THENV Length = 1127 Score = 179 bits (455), Expect = 1e-43 Identities = 93/175 (53%), Positives = 118/175 (67%), Gaps = 6/175 (3%) Frame = +2 Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208 TAF+G + ED + L+ GY + GK++ YSG TGE L A +F G ++YQKL HMV DK+H Sbjct: 950 TAFEGVKEEDLRKLLLKLGYKWDGKEVMYSGITGERLVADIFIGVVYYQKLHHMVADKIH 1009 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 ARARGP +LTRQPTEGRSR+GGLRLGEMERD LI +GAS LL ERL+ SSD +T+Y C Sbjct: 1010 ARARGPVQILTRQPTEGRSREGGLRLGEMERDVLIAHGASALLYERLVESSDKYTMYVCE 1069 Query: 389 TCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 CGL Y K C + + +PYA KLL QEL + + P+L+L + Sbjct: 1070 LCGLPAYLDAKSNKPKCPIHGDTGQFAKVVVPYAYKLLLQELIALGIYPKLELTE 1124 [179][TOP] >UniRef100_P38420 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Arabidopsis thaliana RepID=RPB2_ARATH Length = 1188 Score = 179 bits (455), Expect = 1e-43 Identities = 87/179 (48%), Positives = 112/179 (62%), Gaps = 6/179 (3%) Frame = +2 Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184 H GK T F +++ ++AL GY G + Y+G TG PL A +F GP +YQ+LK Sbjct: 998 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFERMYNGHTGRPLTAMIFLGPTYYQRLK 1057 Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364 HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD Sbjct: 1058 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1117 Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 + V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+ Sbjct: 1118 AYRVHVCEVCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYACKLLFQELMSMAIAPRM 1176 [180][TOP] >UniRef100_B3L0J5 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H RepID=B3L0J5_PLAKH Length = 1371 Score = 179 bits (454), Expect = 1e-43 Identities = 87/184 (47%), Positives = 119/184 (64%), Gaps = 8/184 (4%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EG T F +++ ++ L GY G D+ Y+G G+ L++ +F GP +YQ+LKH Sbjct: 1189 EGGEGDATPFSKITVQEISQRLHNLGYEKYGNDVLYNGHNGKMLKSKIFIGPTYYQRLKH 1248 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV+DK+HAR+RGP ++TRQPTEGRSRDGGLR GEMERDC+I +G++ +L ERL SD Sbjct: 1249 MVEDKIHARSRGPLTMITRQPTEGRSRDGGLRFGEMERDCMISHGSAKMLKERLFEESDA 1308 Query: 368 FTVYACGTCGLL--------GYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 + V+ C CGL Y+ C C + +S + IPYACKLLFQEL M + P+L Sbjct: 1309 YRVHVCDNCGLCCIADINKNAYE--CTVCNSKTNISQIYIPYACKLLFQELMTMAIYPKL 1366 Query: 524 KLDD 535 L+D Sbjct: 1367 VLED 1370 [181][TOP] >UniRef100_Q0DQ04 DNA-directed RNA polymerase (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q0DQ04_ORYSJ Length = 368 Score = 178 bits (452), Expect = 2e-43 Identities = 87/183 (47%), Positives = 112/183 (61%), Gaps = 6/183 (3%) Frame = +2 Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184 H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK Sbjct: 176 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLK 235 Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364 HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD Sbjct: 236 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAFFLKERLFDQSD 295 Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526 + V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+ Sbjct: 296 AYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 355 Query: 527 LDD 535 D Sbjct: 356 TQD 358 [182][TOP] >UniRef100_B9FA12 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=B9FA12_ORYSJ Length = 1218 Score = 178 bits (452), Expect = 2e-43 Identities = 87/183 (47%), Positives = 112/183 (61%), Gaps = 6/183 (3%) Frame = +2 Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184 H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK Sbjct: 1026 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLK 1085 Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364 HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD Sbjct: 1086 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAFFLKERLFDQSD 1145 Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526 + V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+ Sbjct: 1146 AYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1205 Query: 527 LDD 535 D Sbjct: 1206 TQD 1208 [183][TOP] >UniRef100_Q10G20 DNA-directed RNA polymerase n=2 Tax=Oryza sativa RepID=Q10G20_ORYSJ Length = 1222 Score = 178 bits (452), Expect = 2e-43 Identities = 87/183 (47%), Positives = 112/183 (61%), Gaps = 6/183 (3%) Frame = +2 Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184 H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK Sbjct: 1030 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLK 1089 Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364 HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD Sbjct: 1090 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAFFLKERLFDQSD 1149 Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526 + V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+ Sbjct: 1150 AYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1209 Query: 527 LDD 535 D Sbjct: 1210 TQD 1212 [184][TOP] >UniRef100_Q963D7 RNA polymerase II subunit 2 (Fragment) n=1 Tax=Blepharisma japonicum RepID=Q963D7_BLEJA Length = 203 Score = 178 bits (452), Expect = 2e-43 Identities = 88/173 (50%), Positives = 111/173 (64%), Gaps = 7/173 (4%) Frame = +2 Query: 26 GTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKM 205 GT F +ED + L A GY G ++ Y+G TG L + +F GP +YQ+LKHMV DK+ Sbjct: 26 GTPFQSVTVEDISRDLHALGYQLRGNEVMYNGHTGNRLASQIFFGPTYYQRLKHMVDDKI 85 Query: 206 HARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYAC 385 H+RARG LTRQPTEGRSRDGGLR GEMERDC+I +GA+ L ERL +SD + V+ C Sbjct: 86 HSRARGQVQSLTRQPTEGRSRDGGLRFGEMERDCMISHGAARFLKERLFEASDAYRVHVC 145 Query: 386 GTCGLLGYKG------WCQYCRT-GAAVSALQIPYACKLLFQELQGMNVVPRL 523 CGL C+ C+ +S + IPYACKLLFQEL M++ PRL Sbjct: 146 ENCGLFAIANLDRNMFQCKQCKNKNTRISQIFIPYACKLLFQELMAMHIAPRL 198 [185][TOP] >UniRef100_A4WN98 DNA-directed RNA polymerase n=1 Tax=Pyrobaculum arsenaticum DSM 13514 RepID=A4WN98_PYRAR Length = 1127 Score = 178 bits (452), Expect = 2e-43 Identities = 92/175 (52%), Positives = 117/175 (66%), Gaps = 6/175 (3%) Frame = +2 Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208 T F+G + ED + L+ GY + GK++ YSG TGE L A +F G ++YQKL HMV DK+H Sbjct: 950 TPFEGVKEEDLRKLLLKLGYKWDGKEVMYSGITGEKLVADIFIGIVYYQKLHHMVADKIH 1009 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 ARARGP +LTRQPTEGRSR+GGLRLGEMERD LI +GAS LL ERL+ SSD +T+Y C Sbjct: 1010 ARARGPVQILTRQPTEGRSREGGLRLGEMERDVLIAHGASALLYERLVESSDKYTMYVCE 1069 Query: 389 TCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 CGL Y K C + + +PYA KLL QEL + + P+L+L + Sbjct: 1070 LCGLPAYLDAKSNKPKCPIHGDTGQFAKVTVPYAFKLLLQELIALGIYPKLELSE 1124 [186][TOP] >UniRef100_UPI0001926137 PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata RepID=UPI0001926137 Length = 1426 Score = 178 bits (451), Expect = 3e-43 Identities = 88/182 (48%), Positives = 116/182 (63%), Gaps = 7/182 (3%) Frame = +2 Query: 5 HEGKFRMGTAF-DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 ++G+ T F D ++ + L GY G ++ Y+G TG L A VF GP +YQ+L Sbjct: 997 NKGEIGDATPFNDAVNVQLVSSLLQEYGYHLRGNEVLYNGFTGRKLNAQVFLGPTYYQRL 1056 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DK+H+RARGP +LTRQP EGRSRDGGLR GEMERDC I +GA+ L ERL +S Sbjct: 1057 KHMVDDKIHSRARGPVQILTRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLNERLFEAS 1116 Query: 362 DVFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 D + V+ C CGL+ C+ C+ VS ++IPYACKLLFQEL M++ PR+ Sbjct: 1117 DAYRVHVCNLCGLIAIANLRNNTFECRSCKNKTQVSQIRIPYACKLLFQELMSMSIAPRM 1176 Query: 524 KL 529 + Sbjct: 1177 MI 1178 [187][TOP] >UniRef100_O96236 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7 RepID=O96236_PLAF7 Length = 1340 Score = 178 bits (451), Expect = 3e-43 Identities = 86/184 (46%), Positives = 118/184 (64%), Gaps = 8/184 (4%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EG T F +++ ++ L GY G +M Y+G G L++ +F GP +YQ+LKH Sbjct: 1158 EGGEGDATPFSKITVQEISQKLHNLGYEKYGNEMLYNGHNGRMLKSKIFIGPTYYQRLKH 1217 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV+DK+HAR+RGP ++TRQPTEGRSRDGGLR GEMERDC+I +G++ +L ERL SD Sbjct: 1218 MVEDKIHARSRGPLTMITRQPTEGRSRDGGLRFGEMERDCMISHGSAKMLKERLFEESDA 1277 Query: 368 FTVYACGTCGLL--------GYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 + V+ C CGL Y+ C C + +S + +PYACKLLFQEL M + P+L Sbjct: 1278 YRVHVCDNCGLCCIADINKNAYE--CTVCNSKTNISQIYLPYACKLLFQELMTMAIYPKL 1335 Query: 524 KLDD 535 L+D Sbjct: 1336 VLED 1339 [188][TOP] >UniRef100_Q5KIB7 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans RepID=Q5KIB7_CRYNE Length = 1193 Score = 178 bits (451), Expect = 3e-43 Identities = 87/171 (50%), Positives = 110/171 (64%), Gaps = 6/171 (3%) Frame = +2 Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208 T F +E ++ L A GY G ++ Y G TG L+A V+ GP +YQ+LKHMV DK+H Sbjct: 1018 TPFTELTVEAVSKVLRAKGYQSRGFEVLYHGHTGRKLQAQVYFGPTYYQRLKHMVDDKIH 1077 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 ARARGP +LTRQP EGRSRDGGLR GEMERDC+I +G + L ER+ SSD F ++ C Sbjct: 1078 ARARGPLQILTRQPVEGRSRDGGLRFGEMERDCMISHGIAGFLKERMYDSSDAFRIHVCD 1137 Query: 389 TCGLLGYKG------WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 CGL+ +C CR +S + IPYA KLLFQELQ MN+ R+ Sbjct: 1138 VCGLMAVANLKKQEFYCSVCRNSTQISQVYIPYAAKLLFQELQAMNIACRM 1188 [189][TOP] >UniRef100_Q55U25 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans RepID=Q55U25_CRYNE Length = 1245 Score = 178 bits (451), Expect = 3e-43 Identities = 87/171 (50%), Positives = 110/171 (64%), Gaps = 6/171 (3%) Frame = +2 Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208 T F +E ++ L A GY G ++ Y G TG L+A V+ GP +YQ+LKHMV DK+H Sbjct: 1070 TPFTELTVEAVSKVLRAKGYQSRGFEVLYHGHTGRKLQAQVYFGPTYYQRLKHMVDDKIH 1129 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 ARARGP +LTRQP EGRSRDGGLR GEMERDC+I +G + L ER+ SSD F ++ C Sbjct: 1130 ARARGPLQILTRQPVEGRSRDGGLRFGEMERDCMISHGIAGFLKERMYDSSDAFRIHVCD 1189 Query: 389 TCGLLGYKG------WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 CGL+ +C CR +S + IPYA KLLFQELQ MN+ R+ Sbjct: 1190 VCGLMAVANLKKQEFYCSVCRNSTQISQVYIPYAAKLLFQELQAMNIACRM 1240 [190][TOP] >UniRef100_C5NSA9 DNA-directed RNA polymerase n=1 Tax=Haladaptatus paucihalophilus RepID=C5NSA9_9EURY Length = 608 Score = 178 bits (451), Expect = 3e-43 Identities = 86/182 (47%), Positives = 118/182 (64%), Gaps = 6/182 (3%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EG+ GTAF G+ E+ AL GY SGK++ YSG TGE + A +F G I Y KL H Sbjct: 425 EGRRVDGTAFSGEDKEELRSALQERGYKSSGKEIMYSGVTGEKIEAEIFVGTILYHKLYH 484 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV +K+HAR+RGP +LTRQPTEGR+R+GGLR+G MERDC +G+GA++ L ERL+ SSD Sbjct: 485 MVSNKLHARSRGPVQVLTRQPTEGRAREGGLRIGTMERDCFVGHGAALALKERLLDSSDR 544 Query: 368 FTVYACGTCGLLGYKG------WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 +Y CG CG+ + +C C + + + YA KLL E++ + + PRL+L Sbjct: 545 EWIYVCGQCGMSAVENIDQNRVYCPNCEEETDIHEIDMSYAFKLLLDEMKALGIAPRLEL 604 Query: 530 DD 535 +D Sbjct: 605 ED 606 [191][TOP] >UniRef100_A9SJE5 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SJE5_PHYPA Length = 1185 Score = 177 bits (450), Expect = 4e-43 Identities = 85/179 (47%), Positives = 113/179 (63%), Gaps = 6/179 (3%) Frame = +2 Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184 H GK T F +++ ++AL GY G ++ Y+G TG L A++F GP +YQ+LK Sbjct: 990 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFEVMYNGHTGRRLTAHIFLGPTYYQRLK 1049 Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364 HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD Sbjct: 1050 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1109 Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 + V+ C CG++ C+ C+ + + IPYACKLLFQEL M + PR+ Sbjct: 1110 AYRVHVCEHCGIIAIANLKKNTYECRGCKNNTDIVQVHIPYACKLLFQELMSMAIAPRM 1168 [192][TOP] >UniRef100_Q1L5B4 DNA-directed RNA polymerase n=1 Tax=Rhododendron macrophyllum RepID=Q1L5B4_RHOMC Length = 1207 Score = 177 bits (449), Expect = 5e-43 Identities = 86/183 (46%), Positives = 112/183 (61%), Gaps = 6/183 (3%) Frame = +2 Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184 H GK T F +++ ++AL GY G + Y+G TG PL +F GP +YQ+LK Sbjct: 1015 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFERMYNGHTGRPLTYTIFLGPTYYQRLK 1074 Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364 HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD Sbjct: 1075 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1134 Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526 + V+ C CG++ C++C+ + + IPYACKLL QEL M + PRL Sbjct: 1135 AYRVHVCALCGIVAIANLKKNSFECRHCKNKTDIVQVYIPYACKLLLQELMAMAIAPRLL 1194 Query: 527 LDD 535 D Sbjct: 1195 TKD 1197 [193][TOP] >UniRef100_Q6CWA5 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis RepID=Q6CWA5_KLULA Length = 1221 Score = 177 bits (449), Expect = 5e-43 Identities = 86/168 (51%), Positives = 111/168 (66%), Gaps = 7/168 (4%) Frame = +2 Query: 50 IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPR 229 ++ + L GY G ++ Y+G TG+ L A +F GP +YQ+L+HMV DK+HARARGP Sbjct: 1049 VDGISRLLREHGYQSRGFEVMYNGHTGKKLMAQIFFGPTYYQRLRHMVDDKIHARARGPM 1108 Query: 230 ALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY 409 +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+ Sbjct: 1109 QVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAAFLKERLMEASDAFRVHICGICGLMSV 1168 Query: 410 -------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 + C+ C+ + + IPYA KLLFQEL MN+ PRL D Sbjct: 1169 VAKLKHNQFECRSCKNKIDIYQVHIPYAAKLLFQELMAMNIAPRLYTD 1216 [194][TOP] >UniRef100_C4QZQ7 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115 RepID=C4QZQ7_PICPG Length = 1227 Score = 177 bits (449), Expect = 5e-43 Identities = 89/172 (51%), Positives = 112/172 (65%), Gaps = 7/172 (4%) Frame = +2 Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208 T F ++ + L GY G ++ Y+G TG+ L A VF GP +YQ+L+HMV DK+H Sbjct: 1045 TPFTDLTVDAVSNLLRDNGYQSRGFEVMYNGHTGKKLMAQVFFGPTYYQRLRHMVDDKIH 1104 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 ARARGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG Sbjct: 1105 ARARGPVQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAGFLKERLMEASDAFRVHVCG 1164 Query: 389 TCGLLGY-------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 CGL+ + C+ C+ + L IPYA KLLFQEL MN+ PRL Sbjct: 1165 ICGLMSVIANLKKNQFECRSCKNKTNIYQLHIPYAAKLLFQELMAMNIAPRL 1216 [195][TOP] >UniRef100_C5NSD0 DNA-directed RNA polymerase n=1 Tax=Halococcus salifodinae RepID=C5NSD0_9EURY Length = 608 Score = 177 bits (449), Expect = 5e-43 Identities = 89/182 (48%), Positives = 121/182 (66%), Gaps = 6/182 (3%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EG+ GTAF G+ E+ +L G+ SGK++ YSG TGE + A +F G IFYQKL H Sbjct: 425 EGRRVDGTAFTGEDEEELRGSLEEHGFDSSGKEIMYSGVTGEKIDAEIFVGTIFYQKLYH 484 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV +K+HAR+RGP +LTRQPTEGR+R+GGLR+GEMERD LIG+GA+M L ERL+ SD Sbjct: 485 MVSNKIHARSRGPVQVLTRQPTEGRAREGGLRVGEMERDVLIGHGAAMALKERLLDESDR 544 Query: 368 FTVYACGTCGLLGYKG------WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 VY CG CG+ + +C C + +++ YA KLL E++ + + PRL+L Sbjct: 545 EFVYVCGECGMSAVENVEQRRVYCPNCGEETEIHEIEMSYAFKLLLDEMKALGIAPRLEL 604 Query: 530 DD 535 +D Sbjct: 605 ED 606 [196][TOP] >UniRef100_C5NSC9 DNA-directed RNA polymerase n=1 Tax=Halococcus saccharolyticus RepID=C5NSC9_9EURY Length = 608 Score = 177 bits (449), Expect = 5e-43 Identities = 89/182 (48%), Positives = 121/182 (66%), Gaps = 6/182 (3%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EG+ GTAF G+ E+ +L G+ SGK++ YSG TGE + A +F G IFYQKL H Sbjct: 425 EGRRVDGTAFTGEDEEELRGSLEEHGFDSSGKEIMYSGVTGEKIDAEIFVGTIFYQKLYH 484 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV +K+HAR+RGP +LTRQPTEGR+R+GGLR+GEMERD LIG+GA+M L ERL+ SD Sbjct: 485 MVSNKIHARSRGPVQVLTRQPTEGRAREGGLRVGEMERDVLIGHGAAMALKERLLDESDR 544 Query: 368 FTVYACGTCGLLGYKG------WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 VY CG CG+ + +C C + +++ YA KLL E++ + + PRL+L Sbjct: 545 EFVYVCGECGMSAVENVEQRRVYCPNCGEETEIHEIEMSYAFKLLLDEMKALGIAPRLEL 604 Query: 530 DD 535 +D Sbjct: 605 ED 606 [197][TOP] >UniRef100_Q6FLD5 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Candida glabrata RepID=RPB2_CANGA Length = 1223 Score = 177 bits (449), Expect = 5e-43 Identities = 87/168 (51%), Positives = 111/168 (66%), Gaps = 7/168 (4%) Frame = +2 Query: 50 IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPR 229 +E ++ L GY G ++ Y+G TG+ L A +F GP +YQ+L+HMV DK+HARARGP Sbjct: 1051 VEGISKLLREHGYQSRGFEVMYNGHTGKKLMAQIFFGPTYYQRLRHMVDDKIHARARGPM 1110 Query: 230 ALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY 409 +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+ Sbjct: 1111 QVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAAFLKERLMEASDAFRVHICGICGLMSV 1170 Query: 410 -------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 + C+ C + + IPYA KLLFQEL MN+ PRL D Sbjct: 1171 IAKLNHNQFECKGCDNKIDIYQIHIPYAAKLLFQELMAMNITPRLYTD 1218 [198][TOP] >UniRef100_Q1L5Z0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nicotiana sylvestris RepID=Q1L5Z0_NICSY Length = 1087 Score = 177 bits (448), Expect = 6e-43 Identities = 87/183 (47%), Positives = 112/183 (61%), Gaps = 6/183 (3%) Frame = +2 Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184 H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK Sbjct: 900 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLK 959 Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364 HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD Sbjct: 960 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1019 Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526 + V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+ Sbjct: 1020 AYRVHVCERCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1079 Query: 527 LDD 535 D Sbjct: 1080 TKD 1082 [199][TOP] >UniRef100_Q1ANF2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spirogyra sp. UWCC FW670 RepID=Q1ANF2_9VIRI Length = 670 Score = 177 bits (448), Expect = 6e-43 Identities = 86/181 (47%), Positives = 113/181 (62%), Gaps = 6/181 (3%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 GK T F ++ + AL + GY G ++ Y+G TG L+A++F GP +YQ+LKHM Sbjct: 483 GKEGDATPFTDVTVDSISRALHSCGYQMRGFEVMYNGHTGRKLQAHIFLGPTYYQRLKHM 542 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD + Sbjct: 543 VDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAY 602 Query: 371 TVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+ Sbjct: 603 RVHVCEHCGLIANANLKKSFFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMMTR 662 Query: 533 D 535 D Sbjct: 663 D 663 [200][TOP] >UniRef100_B9RZ91 DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9RZ91_RICCO Length = 1194 Score = 177 bits (448), Expect = 6e-43 Identities = 87/183 (47%), Positives = 112/183 (61%), Gaps = 6/183 (3%) Frame = +2 Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184 H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK Sbjct: 1000 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLK 1059 Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364 HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD Sbjct: 1060 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1119 Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526 + V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+ Sbjct: 1120 AYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1179 Query: 527 LDD 535 D Sbjct: 1180 TKD 1182 [201][TOP] >UniRef100_B9H2V3 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9H2V3_POPTR Length = 421 Score = 177 bits (448), Expect = 6e-43 Identities = 87/183 (47%), Positives = 112/183 (61%), Gaps = 6/183 (3%) Frame = +2 Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184 H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK Sbjct: 227 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLK 286 Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364 HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD Sbjct: 287 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 346 Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526 + V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+ Sbjct: 347 AYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 406 Query: 527 LDD 535 D Sbjct: 407 TKD 409 [202][TOP] >UniRef100_Q5D921 SJCHGC09486 protein (Fragment) n=1 Tax=Schistosoma japonicum RepID=Q5D921_SCHJA Length = 204 Score = 177 bits (448), Expect = 6e-43 Identities = 84/185 (45%), Positives = 118/185 (63%), Gaps = 7/185 (3%) Frame = +2 Query: 5 HEGKFRMGTAF-DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 ++G+ T F D + + L GY ++G ++ Y+G TG L + +F GP +YQ+L Sbjct: 17 NKGEIGDATPFNDAVNVRKISLLLQEYGYQHTGNEIMYNGFTGRKLNSQIFLGPTYYQRL 76 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DK+H+R+RGP +L RQP EGRSRDGGLR GEMERDC I +GA+ L ERL +S Sbjct: 77 KHMVDDKIHSRSRGPVQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFFAS 136 Query: 362 DVFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 D + VY C CGL+ C+ C+ +S +++PYACKLLFQEL M++ PR+ Sbjct: 137 DPYQVYVCNLCGLIAIAHQRNKTYECRSCKNTTQISLVKLPYACKLLFQELMSMSIAPRM 196 Query: 524 KLDDP 538 ++ P Sbjct: 197 MINSP 201 [203][TOP] >UniRef100_C4Q1D7 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni RepID=C4Q1D7_SCHMA Length = 1304 Score = 177 bits (448), Expect = 6e-43 Identities = 84/185 (45%), Positives = 118/185 (63%), Gaps = 7/185 (3%) Frame = +2 Query: 5 HEGKFRMGTAF-DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 ++G+ T F D + + L GY ++G ++ Y+G TG L + +F GP +YQ+L Sbjct: 1117 NKGEIGDATPFNDAVNVRKISLLLQEYGYQHTGNEIMYNGFTGRKLNSQIFLGPTYYQRL 1176 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DK+H+R+RGP +L RQP EGRSRDGGLR GEMERDC I +GA+ L ERL +S Sbjct: 1177 KHMVDDKIHSRSRGPVQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFFAS 1236 Query: 362 DVFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 D + VY C CGL+ C+ C+ +S +++PYACKLLFQEL M++ PR+ Sbjct: 1237 DPYQVYVCNLCGLIAIAHQRNKTYECRSCKNTTQISLVKLPYACKLLFQELMSMSIAPRM 1296 Query: 524 KLDDP 538 ++ P Sbjct: 1297 MINSP 1301 [204][TOP] >UniRef100_C5MEG3 DNA-directed RNA polymerase n=1 Tax=Candida tropicalis MYA-3404 RepID=C5MEG3_CANTT Length = 1240 Score = 177 bits (448), Expect = 6e-43 Identities = 91/179 (50%), Positives = 115/179 (64%), Gaps = 14/179 (7%) Frame = +2 Query: 29 TAFDGDR-------IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 + F+GD E A+ L GY G ++ Y+G TG+ L A VF GP +YQ+L+H Sbjct: 1051 SGFEGDASPFTDVTAEAIAKLLREHGYQSRGFEVMYNGHTGKKLMAQVFFGPTYYQRLRH 1110 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV DK+HARARGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD Sbjct: 1111 MVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAGFLKERLMEASDA 1170 Query: 368 FTVYACGTCGLLGY-------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 F V+ CG CGL+ + C+ C+ + + IPYA KLLFQEL MN+ PRL Sbjct: 1171 FRVHVCGMCGLMSVIANLKKNQFECRSCKNKTNIYQIHIPYAAKLLFQELMAMNISPRL 1229 [205][TOP] >UniRef100_Q42877 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Solanum lycopersicum RepID=RPB2_SOLLC Length = 1191 Score = 177 bits (448), Expect = 6e-43 Identities = 87/183 (47%), Positives = 112/183 (61%), Gaps = 6/183 (3%) Frame = +2 Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184 H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK Sbjct: 997 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLK 1056 Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364 HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD Sbjct: 1057 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1116 Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526 + V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+ Sbjct: 1117 AYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1176 Query: 527 LDD 535 D Sbjct: 1177 TKD 1179 [206][TOP] >UniRef100_Q1L5Y9 DNA-directed RNA polymerase n=1 Tax=Petunia x hybrida RepID=Q1L5Y9_PETHY Length = 1195 Score = 176 bits (447), Expect = 8e-43 Identities = 87/183 (47%), Positives = 112/183 (61%), Gaps = 6/183 (3%) Frame = +2 Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184 H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK Sbjct: 1001 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLPAMIFLGPTYYQRLK 1060 Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364 HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD Sbjct: 1061 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1120 Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526 + V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+ Sbjct: 1121 AYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1180 Query: 527 LDD 535 D Sbjct: 1181 TKD 1183 [207][TOP] >UniRef100_A9BK45 DNA-directed RNA polymerase n=1 Tax=Cryptophyta RepID=A9BK45_9CRYP Length = 1100 Score = 176 bits (447), Expect = 8e-43 Identities = 93/171 (54%), Positives = 115/171 (67%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 GKF GT F +I + L AGYS GK+ F+SG TG P+ VF+GP+FYQKLKHM Sbjct: 928 GKFIDGTPFIESKIAKIKKKLKIAGYSSEGKEFFFSGITGVPMLMDVFSGPVFYQKLKHM 987 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 VKDK+HAR +GP + +TRQP EGRSR GGLR GEMERDCLI YGAS ++ERL+ SSD+ Sbjct: 988 VKDKIHARGKGPCSNITRQPIEGRSRGGGLRFGEMERDCLISYGASEAIIERLLISSDLT 1047 Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 G K + + +L++PYACKLLFQELQ MN++PRL Sbjct: 1048 QANFDLHTGFFTDK------KKSLNIVSLKLPYACKLLFQELQSMNILPRL 1092 [208][TOP] >UniRef100_A7TTM7 DNA-directed RNA polymerase n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TTM7_VANPO Length = 1223 Score = 176 bits (447), Expect = 8e-43 Identities = 87/168 (51%), Positives = 111/168 (66%), Gaps = 7/168 (4%) Frame = +2 Query: 50 IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPR 229 +E ++ L GY G ++ Y+G TG+ L A +F GP +YQ+L+HMV DK+HARARGP Sbjct: 1051 VEGISKLLREHGYQSRGFEVMYNGHTGKKLMAQIFFGPTYYQRLRHMVDDKIHARARGPM 1110 Query: 230 ALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY 409 +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+ Sbjct: 1111 QVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAASFLKERLMEASDAFRVHICGICGLMTV 1170 Query: 410 -------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 + C+ C + + IPYA KLLFQEL MN+ PRL D Sbjct: 1171 IAKLNHNQFECKGCDNKIDIYQIHIPYAAKLLFQELMAMNITPRLYAD 1218 [209][TOP] >UniRef100_A5DVP4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus RepID=A5DVP4_LODEL Length = 1238 Score = 176 bits (447), Expect = 8e-43 Identities = 87/164 (53%), Positives = 110/164 (67%), Gaps = 7/164 (4%) Frame = +2 Query: 53 EDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPRA 232 E ++ L GY G ++ Y+G TG+ L A VF GP +YQ+L+HMV DK+HARARGP Sbjct: 1064 EAVSKLLREHGYQSRGFEVMYNGHTGKKLMAQVFFGPTYYQRLRHMVDDKIHARARGPVQ 1123 Query: 233 LLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY- 409 +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+ Sbjct: 1124 VLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAGFLKERLMEASDAFRVHVCGVCGLMSVI 1183 Query: 410 ------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 + C+ C+ + + IPYA KLLFQEL MN+ PRL Sbjct: 1184 ANLKKNQFECRSCKNKTNIYQIHIPYAAKLLFQELMAMNITPRL 1227 [210][TOP] >UniRef100_Q3IUN3 DNA-directed RNA polymerase n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IUN3_NATPD Length = 610 Score = 176 bits (447), Expect = 8e-43 Identities = 85/182 (46%), Positives = 121/182 (66%), Gaps = 6/182 (3%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EG+ GT F G+ ++ E+L+ G+ +GK++ YSG TGE + A +F G IFYQKL H Sbjct: 427 EGRRVDGTPFQGEDEDELRESLIDRGFKSNGKEVMYSGITGEKIEAEIFVGVIFYQKLYH 486 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV +K+HAR+RGP +LTRQPTEGR+R+GGLR+GEMERD IG+GA+M L ERL+ SD Sbjct: 487 MVSNKLHARSRGPVQVLTRQPTEGRAREGGLRIGEMERDVFIGHGAAMTLKERLLDESDR 546 Query: 368 FTVYACGTCGLLGYKG------WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 +Y CG CG+ + +C C V +++ YA KLL E++ + + PR++L Sbjct: 547 EDIYVCGQCGMSAVENVEQRRVYCPNCDEETDVHEVEMSYAFKLLLDEMKALGIAPRIEL 606 Query: 530 DD 535 +D Sbjct: 607 ED 608 [211][TOP] >UniRef100_A1RSE9 DNA-directed RNA polymerase n=1 Tax=Pyrobaculum islandicum DSM 4184 RepID=A1RSE9_PYRIL Length = 1127 Score = 176 bits (447), Expect = 8e-43 Identities = 91/175 (52%), Positives = 117/175 (66%), Gaps = 6/175 (3%) Frame = +2 Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208 T F+G + E+ + L+ GY + GK++ YSG TGE L A +F G ++YQKL HMV DK+H Sbjct: 950 TPFEGVKEEELRKLLMKLGYKWDGKEVMYSGITGEKLVADIFIGVVYYQKLHHMVADKIH 1009 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 ARARGP +LTRQPTEGRSR+GGLRLGEMERD LI +GAS LL ERL+ SSD +T+Y C Sbjct: 1010 ARARGPVQILTRQPTEGRSREGGLRLGEMERDVLIAHGASALLYERLVESSDKYTMYVCE 1069 Query: 389 TCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 CGL Y K C + + +PYA KLL QEL + + P+L+L + Sbjct: 1070 LCGLPAYLDARTNKPRCPIHGDTGQFAKVIVPYAFKLLLQELIALGIYPKLELSE 1124 [212][TOP] >UniRef100_B3T8B0 DNA-directed RNA polymerase n=1 Tax=uncultured marine crenarchaeote HF4000_APKG5C13 RepID=B3T8B0_9ARCH Length = 1114 Score = 176 bits (447), Expect = 8e-43 Identities = 83/175 (47%), Positives = 117/175 (66%), Gaps = 6/175 (3%) Frame = +2 Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208 +AF G+++++ L AG+ YSGK++ Y G TG+ VF G ++YQKL HMV DK+H Sbjct: 938 SAFVGEKVDEVKSVLEDAGFKYSGKEIMYDGRTGKQFPVEVFIGVVYYQKLHHMVADKIH 997 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 ARARG +LT+QPTEGR+R GGLR GEMERDC+I YGASM+L +RL+ SD ++ C Sbjct: 998 ARARGQVQMLTKQPTEGRARGGGLRFGEMERDCIIAYGASMILKDRLLDESDKSDIFVCE 1057 Query: 389 TCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 CGL+ Y + +C+ C VS++ + YA KLL QE+ +N+ PRL + + Sbjct: 1058 RCGLVAYHDIKQRRFYCRVCDKKGKVSSVSVAYAFKLLLQEMSCLNIAPRLLIKE 1112 [213][TOP] >UniRef100_P08518 DNA-directed RNA polymerase II subunit RPB2 n=4 Tax=Saccharomyces cerevisiae RepID=RPB2_YEAST Length = 1224 Score = 176 bits (447), Expect = 8e-43 Identities = 87/168 (51%), Positives = 111/168 (66%), Gaps = 7/168 (4%) Frame = +2 Query: 50 IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPR 229 +E ++ L GY G ++ Y+G TG+ L A +F GP +YQ+L+HMV DK+HARARGP Sbjct: 1052 VEGISKLLREHGYQSRGFEVMYNGHTGKKLMAQIFFGPTYYQRLRHMVDDKIHARARGPM 1111 Query: 230 ALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY 409 +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+ Sbjct: 1112 QVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAASFLKERLMEASDAFRVHICGICGLMTV 1171 Query: 410 -------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 + C+ C + + IPYA KLLFQEL MN+ PRL D Sbjct: 1172 IAKLNHNQFECKGCDNKIDIYQIHIPYAAKLLFQELMAMNITPRLYTD 1219 [214][TOP] >UniRef100_Q753Q4 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Eremothecium gossypii RepID=RPB2_ASHGO Length = 1222 Score = 176 bits (447), Expect = 8e-43 Identities = 86/168 (51%), Positives = 112/168 (66%), Gaps = 7/168 (4%) Frame = +2 Query: 50 IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPR 229 ++ ++ L GY G ++ Y+G TG+ L A +F GP +YQ+L+HMV DK+HARARGP Sbjct: 1050 VDGISKLLREHGYQSRGFEVMYNGHTGKKLMAQIFFGPTYYQRLRHMVDDKIHARARGPM 1109 Query: 230 ALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY 409 +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+ Sbjct: 1110 QVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAAFLKERLMEASDAFRVHICGICGLMTV 1169 Query: 410 -------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 + C+ C+ + + IPYA KLLFQEL MN+ PRL D Sbjct: 1170 VAKLKHNQFECRGCKNKIDIYQVHIPYAAKLLFQELMAMNIAPRLYTD 1217 [215][TOP] >UniRef100_A7PJ31 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7PJ31_VITVI Length = 1220 Score = 176 bits (446), Expect = 1e-42 Identities = 86/179 (48%), Positives = 111/179 (62%), Gaps = 6/179 (3%) Frame = +2 Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184 H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK Sbjct: 1026 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLK 1085 Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364 HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD Sbjct: 1086 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1145 Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 + V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+ Sbjct: 1146 AYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM 1204 [216][TOP] >UniRef100_A5C1N0 DNA-directed RNA polymerase n=2 Tax=Vitis RepID=A5C1N0_VITVI Length = 1193 Score = 176 bits (446), Expect = 1e-42 Identities = 86/179 (48%), Positives = 111/179 (62%), Gaps = 6/179 (3%) Frame = +2 Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184 H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK Sbjct: 999 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLK 1058 Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364 HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD Sbjct: 1059 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1118 Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 + V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+ Sbjct: 1119 AYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM 1177 [217][TOP] >UniRef100_Q6CAD6 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica RepID=Q6CAD6_YARLI Length = 1229 Score = 176 bits (446), Expect = 1e-42 Identities = 86/175 (49%), Positives = 113/175 (64%), Gaps = 7/175 (4%) Frame = +2 Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208 T F ++ ++ L + GY G ++ Y G TG+ + A F GP +YQ+L+HMV DK+H Sbjct: 1047 TPFTDVTVDAISKLLRSHGYQSRGFEVMYHGHTGKKIMAQCFLGPTYYQRLRHMVDDKIH 1106 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 ARARGP +LTRQP EGRSR+GGLR GEMERDC+I +GA+ L ERLM +SD F ++ CG Sbjct: 1107 ARARGPVQILTRQPVEGRSREGGLRFGEMERDCMIAHGAAAFLKERLMEASDAFRIHVCG 1166 Query: 389 TCGLLGY-------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 CG + + C+ CR + +QIPYA KLLFQEL MN+ PRL D Sbjct: 1167 VCGSMNVIANLKKNQFECRSCRNKTKIYQVQIPYAAKLLFQELMAMNIAPRLFSD 1221 [218][TOP] >UniRef100_Q2VA54 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum RepID=Q2VA54_PHANO Length = 1262 Score = 176 bits (446), Expect = 1e-42 Identities = 87/175 (49%), Positives = 114/175 (65%), Gaps = 7/175 (4%) Frame = +2 Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208 T F +++ ++ L AGY G ++ Y+G TG+ +R VF GP +YQ+L+HMV DK+H Sbjct: 1080 TPFTEVTVDEISDLLEQAGYQKRGFEIMYNGHTGKKMRVQVFLGPTYYQRLRHMVDDKIH 1139 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 ARARGP +LTRQP EGR+RDGGLR GEMERDC+I +GA+ L ERL SD +TV+ C Sbjct: 1140 ARARGPLQILTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFTVSDAYTVHVCD 1199 Query: 389 TCGLLG-----YKGW--CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 CGL+ KG C+ C +S + IPYA KLLFQEL MN+ R+ D Sbjct: 1200 ICGLMSPIASIKKGMYECRPCHNKTRISQIHIPYAAKLLFQELLAMNIATRMFTD 1254 [219][TOP] >UniRef100_Q1HDK3 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria sp. S-93-48 RepID=Q1HDK3_9PLEO Length = 1262 Score = 176 bits (446), Expect = 1e-42 Identities = 87/175 (49%), Positives = 114/175 (65%), Gaps = 7/175 (4%) Frame = +2 Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208 T F +++ ++ L AGY G ++ Y+G TG+ +R VF GP +YQ+L+HMV DK+H Sbjct: 1080 TPFTEVTVDEISDLLEQAGYQKRGFEIMYNGHTGKKMRVQVFLGPTYYQRLRHMVDDKIH 1139 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 ARARGP +LTRQP EGR+RDGGLR GEMERDC+I +GA+ L ERL SD +TV+ C Sbjct: 1140 ARARGPLQILTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFTVSDAYTVHVCD 1199 Query: 389 TCGLLG-----YKGW--CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 CGL+ KG C+ C +S + IPYA KLLFQEL MN+ R+ D Sbjct: 1200 ICGLMSPIASIKKGMYECRPCHNKTRISQIHIPYAAKLLFQELLAMNIATRMFTD 1254 [220][TOP] >UniRef100_Q1HDK2 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp. triticae RepID=Q1HDK2_9PLEO Length = 1262 Score = 176 bits (446), Expect = 1e-42 Identities = 87/175 (49%), Positives = 114/175 (65%), Gaps = 7/175 (4%) Frame = +2 Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208 T F +++ ++ L AGY G ++ Y+G TG+ +R VF GP +YQ+L+HMV DK+H Sbjct: 1080 TPFTEVTVDEISDLLEQAGYQKRGFEIMYNGHTGKKMRVQVFLGPTYYQRLRHMVDDKIH 1139 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 ARARGP +LTRQP EGR+RDGGLR GEMERDC+I +GA+ L ERL SD +TV+ C Sbjct: 1140 ARARGPLQILTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFTVSDAYTVHVCD 1199 Query: 389 TCGLLG-----YKGW--CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 CGL+ KG C+ C +S + IPYA KLLFQEL MN+ R+ D Sbjct: 1200 ICGLMSPIASIKKGMYECRPCHNKTRISQIHIPYAAKLLFQELLAMNIATRMFTD 1254 [221][TOP] >UniRef100_Q1HDK1 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp. triticae RepID=Q1HDK1_9PLEO Length = 1262 Score = 176 bits (446), Expect = 1e-42 Identities = 87/175 (49%), Positives = 114/175 (65%), Gaps = 7/175 (4%) Frame = +2 Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208 T F +++ ++ L AGY G ++ Y+G TG+ +R VF GP +YQ+L+HMV DK+H Sbjct: 1080 TPFTEVTVDEISDLLEQAGYQKRGFEIMYNGHTGKKMRVQVFLGPTYYQRLRHMVDDKIH 1139 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 ARARGP +LTRQP EGR+RDGGLR GEMERDC+I +GA+ L ERL SD +TV+ C Sbjct: 1140 ARARGPLQILTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFTVSDAYTVHVCD 1199 Query: 389 TCGLLG-----YKGW--CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 CGL+ KG C+ C +S + IPYA KLLFQEL MN+ R+ D Sbjct: 1200 ICGLMSPIASIKKGMYECRPCHNKTRISQIHIPYAAKLLFQELLAMNIATRMFTD 1254 [222][TOP] >UniRef100_Q1HDJ9 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp. triticae RepID=Q1HDJ9_9PLEO Length = 1262 Score = 176 bits (446), Expect = 1e-42 Identities = 87/175 (49%), Positives = 114/175 (65%), Gaps = 7/175 (4%) Frame = +2 Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208 T F +++ ++ L AGY G ++ Y+G TG+ +R VF GP +YQ+L+HMV DK+H Sbjct: 1080 TPFTEVTVDEISDLLEQAGYQKRGFEIMYNGHTGKKMRVQVFLGPTYYQRLRHMVDDKIH 1139 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 ARARGP +LTRQP EGR+RDGGLR GEMERDC+I +GA+ L ERL SD +TV+ C Sbjct: 1140 ARARGPLQILTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFTVSDAYTVHVCD 1199 Query: 389 TCGLLG-----YKGW--CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 CGL+ KG C+ C +S + IPYA KLLFQEL MN+ R+ D Sbjct: 1200 ICGLMSPIASIKKGMYECRPCHNKTRISQIHIPYAAKLLFQELLAMNIATRMFTD 1254 [223][TOP] >UniRef100_Q1HDJ8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum RepID=Q1HDJ8_PHANO Length = 1262 Score = 176 bits (446), Expect = 1e-42 Identities = 87/175 (49%), Positives = 114/175 (65%), Gaps = 7/175 (4%) Frame = +2 Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208 T F +++ ++ L AGY G ++ Y+G TG+ +R VF GP +YQ+L+HMV DK+H Sbjct: 1080 TPFTEVTVDEISDLLEQAGYQKRGFEIMYNGHTGKKMRVQVFLGPTYYQRLRHMVDDKIH 1139 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 ARARGP +LTRQP EGR+RDGGLR GEMERDC+I +GA+ L ERL SD +TV+ C Sbjct: 1140 ARARGPLQILTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFTVSDAYTVHVCD 1199 Query: 389 TCGLLG-----YKGW--CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 CGL+ KG C+ C +S + IPYA KLLFQEL MN+ R+ D Sbjct: 1200 ICGLMSPIASIKKGMYECRPCHNKTRISQIHIPYAAKLLFQELLAMNIATRMFTD 1254 [224][TOP] >UniRef100_Q1HDI7 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp. avenaria RepID=Q1HDI7_9PLEO Length = 1262 Score = 176 bits (446), Expect = 1e-42 Identities = 87/175 (49%), Positives = 114/175 (65%), Gaps = 7/175 (4%) Frame = +2 Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208 T F +++ ++ L AGY G ++ Y+G TG+ +R VF GP +YQ+L+HMV DK+H Sbjct: 1080 TPFTEVTVDEISDLLEQAGYQKRGFEIMYNGHTGKKMRVQVFLGPTYYQRLRHMVDDKIH 1139 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 ARARGP +LTRQP EGR+RDGGLR GEMERDC+I +GA+ L ERL SD +TV+ C Sbjct: 1140 ARARGPLQILTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFTVSDAYTVHVCD 1199 Query: 389 TCGLLG-----YKGW--CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 CGL+ KG C+ C +S + IPYA KLLFQEL MN+ R+ D Sbjct: 1200 ICGLMSPIASIKKGMYECRPCHNKTRISQIHIPYAAKLLFQELLAMNIATRMFTD 1254 [225][TOP] >UniRef100_Q1HDI5 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp. avenaria RepID=Q1HDI5_9PLEO Length = 1262 Score = 176 bits (446), Expect = 1e-42 Identities = 87/175 (49%), Positives = 114/175 (65%), Gaps = 7/175 (4%) Frame = +2 Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208 T F +++ ++ L AGY G ++ Y+G TG+ +R VF GP +YQ+L+HMV DK+H Sbjct: 1080 TPFTEVTVDEISDLLEQAGYQKRGFEIMYNGHTGKKMRVQVFLGPTYYQRLRHMVDDKIH 1139 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 ARARGP +LTRQP EGR+RDGGLR GEMERDC+I +GA+ L ERL SD +TV+ C Sbjct: 1140 ARARGPLQILTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFTVSDAYTVHVCD 1199 Query: 389 TCGLLG-----YKGW--CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 CGL+ KG C+ C +S + IPYA KLLFQEL MN+ R+ D Sbjct: 1200 ICGLMSPIASIKKGMYECRPCHNKTRISQIHIPYAAKLLFQELLAMNIATRMFTD 1254 [226][TOP] >UniRef100_Q0U9V8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum RepID=Q0U9V8_PHANO Length = 1252 Score = 176 bits (446), Expect = 1e-42 Identities = 87/175 (49%), Positives = 114/175 (65%), Gaps = 7/175 (4%) Frame = +2 Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208 T F +++ ++ L AGY G ++ Y+G TG+ +R VF GP +YQ+L+HMV DK+H Sbjct: 1070 TPFTEVTVDEISDLLEQAGYQKRGFEIMYNGHTGKKMRVQVFLGPTYYQRLRHMVDDKIH 1129 Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388 ARARGP +LTRQP EGR+RDGGLR GEMERDC+I +GA+ L ERL SD +TV+ C Sbjct: 1130 ARARGPLQILTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFTVSDAYTVHVCD 1189 Query: 389 TCGLLG-----YKGW--CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 CGL+ KG C+ C +S + IPYA KLLFQEL MN+ R+ D Sbjct: 1190 ICGLMSPIASIKKGMYECRPCHNKTRISQIHIPYAAKLLFQELLAMNIATRMFTD 1244 [227][TOP] >UniRef100_C5DW43 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732 RepID=C5DW43_ZYGRC Length = 1224 Score = 176 bits (446), Expect = 1e-42 Identities = 86/168 (51%), Positives = 111/168 (66%), Gaps = 7/168 (4%) Frame = +2 Query: 50 IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPR 229 +E ++ L GY G ++ Y+G TG+ L + +F GP +YQ+L+HMV DK+HARARGP Sbjct: 1052 VEGISKLLREHGYQSRGFEVMYNGHTGKKLMSQIFFGPTYYQRLRHMVDDKIHARARGPM 1111 Query: 230 ALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY 409 +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+ Sbjct: 1112 QVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAAFLKERLMEASDAFRVHICGICGLMSV 1171 Query: 410 -------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 + C+ C + + IPYA KLLFQEL MN+ PRL D Sbjct: 1172 VAKLNHNQFECRGCDNKIDIYQIHIPYAAKLLFQELMAMNITPRLYTD 1219 [228][TOP] >UniRef100_C5DLS0 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DLS0_LACTC Length = 1220 Score = 176 bits (446), Expect = 1e-42 Identities = 86/168 (51%), Positives = 111/168 (66%), Gaps = 7/168 (4%) Frame = +2 Query: 50 IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPR 229 ++ + L GY G ++ Y+G TG+ L A +F GP +YQ+L+HMV DK+HARARGP Sbjct: 1048 VDGISRLLREHGYQSRGFEVMYNGHTGKKLMAQIFFGPTYYQRLRHMVDDKIHARARGPV 1107 Query: 230 ALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY 409 +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+ Sbjct: 1108 QVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAAFLKERLMEASDAFRVHICGVCGLMTV 1167 Query: 410 -------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 + C+ C+ + + IPYA KLLFQEL MN+ PRL D Sbjct: 1168 VAKLKHNQFECRGCKNKIDIYQIHIPYAAKLLFQELMAMNIAPRLYTD 1215 [229][TOP] >UniRef100_C8SAT6 RNA polymerase Rpb2 domain 6 n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SAT6_FERPL Length = 604 Score = 176 bits (446), Expect = 1e-42 Identities = 90/176 (51%), Positives = 118/176 (67%), Gaps = 6/176 (3%) Frame = +2 Query: 26 GTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKM 205 GT F G++ ED EAL G+SY+GK++ Y G TG+ A +F G I+Y+KL HMV K+ Sbjct: 427 GTIFHGEKEEDLREALKKYGFSYTGKEVMYDGITGKRFVAEIFVGVIYYEKLYHMVSSKI 486 Query: 206 HARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYAC 385 HAR+RGP +LTRQPTEGRSR GGLR GEMERD LIG+GA++LL +RL+ SD V+ C Sbjct: 487 HARSRGPVQILTRQPTEGRSRKGGLRFGEMERDVLIGHGAALLLKDRLLEESDKVEVWVC 546 Query: 386 GTCGLLG---YK---GWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535 G CG + YK +C+ C + V +++ YA KLL EL+ M + PRL L D Sbjct: 547 GNCGHVATYDYKRNTAYCKVCDDESNVHKIEMSYAFKLLLDELKSMLIAPRLILGD 602 [230][TOP] >UniRef100_Q8ZYQ9 DNA-directed RNA polymerase n=1 Tax=Pyrobaculum aerophilum RepID=Q8ZYQ9_PYRAE Length = 1127 Score = 176 bits (445), Expect = 1e-42 Identities = 92/181 (50%), Positives = 118/181 (65%), Gaps = 6/181 (3%) Frame = +2 Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190 G+ T F+G + ED + L+ GY + GK++ YSG TGE L A +F G ++YQKL HM Sbjct: 944 GQLIDATPFEGVKEEDLRKLLLKLGYKWDGKEVMYSGITGERLVADIFIGIVYYQKLHHM 1003 Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370 V DK+HARARGP +LTRQPTEGRSR+GGLRLGEMERD LI +GAS LL ERL+ SSD + Sbjct: 1004 VADKIHARARGPVQILTRQPTEGRSREGGLRLGEMERDVLIAHGASALLHERLVESSDKY 1063 Query: 371 TVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532 +Y C CGL Y K C + + +PYA KLL QEL + + P+L+L Sbjct: 1064 VMYVCELCGLPAYLDAKSNKPKCPIHGDTGQFAKVVVPYAFKLLLQELIALGIYPKLELS 1123 Query: 533 D 535 + Sbjct: 1124 E 1124 [231][TOP] >UniRef100_Q1L5Y8 DNA-directed RNA polymerase n=1 Tax=Antirrhinum majus RepID=Q1L5Y8_ANTMA Length = 1200 Score = 175 bits (444), Expect = 2e-42 Identities = 85/183 (46%), Positives = 112/183 (61%), Gaps = 6/183 (3%) Frame = +2 Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184 H GK T F +++ ++AL GY G + Y+G TG L + +F GP +YQ+LK Sbjct: 1006 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSSMIFLGPTYYQRLK 1065 Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364 HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD Sbjct: 1066 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1125 Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526 + ++ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+ Sbjct: 1126 AYRIHVCEQCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRML 1185 Query: 527 LDD 535 D Sbjct: 1186 TKD 1188 [232][TOP] >UniRef100_Q1L5B5 DNA-directed RNA polymerase n=1 Tax=Rhododendron macrophyllum RepID=Q1L5B5_RHOMC Length = 1191 Score = 175 bits (444), Expect = 2e-42 Identities = 85/183 (46%), Positives = 112/183 (61%), Gaps = 6/183 (3%) Frame = +2 Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184 H GK T F +++ ++AL GY G + Y+G TG L + +F GP +YQ+LK Sbjct: 997 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTSMIFLGPTYYQRLK 1056 Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364 HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD Sbjct: 1057 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1116 Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526 + ++ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+ Sbjct: 1117 AYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRML 1176 Query: 527 LDD 535 D Sbjct: 1177 TKD 1179 [233][TOP] >UniRef100_A7SHD8 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis RepID=A7SHD8_NEMVE Length = 1182 Score = 175 bits (444), Expect = 2e-42 Identities = 87/187 (46%), Positives = 118/187 (63%), Gaps = 7/187 (3%) Frame = +2 Query: 5 HEGKFRMGTAF-DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 ++G+ T F D ++ ++ L GY G ++ YSG TG L VF GP +YQ+L Sbjct: 996 NKGEIGDATPFNDAVNVQKISQLLNDYGYHLRGNEVLYSGFTGRKLNTQVFLGPTYYQRL 1055 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DK+H+RARGP +LTRQP EGRSRDGGLR GEMERDC+I +G++ L ERL S Sbjct: 1056 KHMVDDKIHSRARGPLQILTRQPMEGRSRDGGLRFGEMERDCMIAHGSAQFLNERLFEVS 1115 Query: 362 DVFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 D ++ + C CGL+ C+ C+ VS +++PYA KLLFQEL M++ PR+ Sbjct: 1116 DPYSCHVCNLCGLIAIANLRNNTFECRGCKNKTQVSRIRMPYAAKLLFQELMSMSIAPRM 1175 Query: 524 KLDDP*K 544 + DP K Sbjct: 1176 MVCDPVK 1182 [234][TOP] >UniRef100_Q5A8Y5 DNA-directed RNA polymerase n=2 Tax=Candida albicans RepID=Q5A8Y5_CANAL Length = 1234 Score = 175 bits (444), Expect = 2e-42 Identities = 90/179 (50%), Positives = 114/179 (63%), Gaps = 14/179 (7%) Frame = +2 Query: 29 TAFDGDR-------IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 + F+GD E + L GY G ++ Y+G TG+ L A VF GP +YQ+L+H Sbjct: 1045 SGFEGDASPFTDVTTEQISTLLRDHGYQSRGFEVMYNGHTGKKLMAQVFFGPTYYQRLRH 1104 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV DK+HARARGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD Sbjct: 1105 MVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAGFLKERLMEASDA 1164 Query: 368 FTVYACGTCGLLGY-------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 F V+ CG CGL+ + C+ C+ + + IPYA KLLFQEL MN+ PRL Sbjct: 1165 FRVHVCGMCGLMSVIANLKKNQFECRSCKNKTNIYQIHIPYAAKLLFQELMAMNISPRL 1223 [235][TOP] >UniRef100_C4Y645 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y645_CLAL4 Length = 858 Score = 175 bits (444), Expect = 2e-42 Identities = 87/164 (53%), Positives = 110/164 (67%), Gaps = 7/164 (4%) Frame = +2 Query: 53 EDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPRA 232 E ++ L GY G ++ Y+G TG+ L A VF GP +YQ+L+HMV DK+HARARGP Sbjct: 684 EAVSKLLREHGYQSRGFEVMYNGHTGKKLMAQVFFGPTYYQRLRHMVDDKIHARARGPVQ 743 Query: 233 LLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY- 409 +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+ Sbjct: 744 VLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAGFLKERLMEASDAFRVHVCGICGLMSVI 803 Query: 410 ------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 + C+ C+ + + IPYA KLLFQEL MN+ PRL Sbjct: 804 ANLKKNQFECRSCKNKTNIYQIHIPYAAKLLFQELMAMNISPRL 847 [236][TOP] >UniRef100_B9W6V2 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36 RepID=B9W6V2_CANDC Length = 1234 Score = 175 bits (444), Expect = 2e-42 Identities = 90/179 (50%), Positives = 114/179 (63%), Gaps = 14/179 (7%) Frame = +2 Query: 29 TAFDGDR-------IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 + F+GD E + L GY G ++ Y+G TG+ L A VF GP +YQ+L+H Sbjct: 1045 SGFEGDASPFTDVTTEQISTLLRDHGYQSRGFEVMYNGHTGKKLMAQVFFGPTYYQRLRH 1104 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV DK+HARARGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD Sbjct: 1105 MVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAGFLKERLMEASDA 1164 Query: 368 FTVYACGTCGLLGY-------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 F V+ CG CGL+ + C+ C+ + + IPYA KLLFQEL MN+ PRL Sbjct: 1165 FRVHVCGMCGLMSVIANLKKNQFECRSCKNKTNIYQIHIPYAAKLLFQELMAMNISPRL 1223 [237][TOP] >UniRef100_B5RV50 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii RepID=B5RV50_DEBHA Length = 1232 Score = 175 bits (444), Expect = 2e-42 Identities = 87/164 (53%), Positives = 110/164 (67%), Gaps = 7/164 (4%) Frame = +2 Query: 53 EDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPRA 232 E ++ L GY G ++ Y+G TG+ L A VF GP +YQ+L+HMV DK+HARARGP Sbjct: 1058 EAVSKLLREHGYQSRGFEVMYNGHTGKKLMAQVFFGPTYYQRLRHMVDDKIHARARGPVQ 1117 Query: 233 LLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY- 409 +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+ Sbjct: 1118 VLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAGFLKERLMEASDAFRVHVCGICGLMSVI 1177 Query: 410 ------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 + C+ C+ + + IPYA KLLFQEL MN+ PRL Sbjct: 1178 ANLKKNQFECRSCKNKTNIYQIHIPYAAKLLFQELMAMNISPRL 1221 [238][TOP] >UniRef100_Q464Y6 DNA-directed RNA polymerase n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q464Y6_METBF Length = 604 Score = 175 bits (444), Expect = 2e-42 Identities = 88/182 (48%), Positives = 118/182 (64%), Gaps = 6/182 (3%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EG+ TAF G+ ED EAL G++++GK++FY G+TG+ + A VF G I YQKL H Sbjct: 421 EGRRVNATAFSGENEEDLREALKRHGFAHTGKEVFYDGATGKMIPADVFVGVILYQKLHH 480 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV KMHAR+RGP +LTRQPTEGR+R+GGLR GEMERD L+G+GA+M L ERL+ SD Sbjct: 481 MVTSKMHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLVGHGAAMSLKERLLDESDK 540 Query: 368 FTVYACGTCGLLG------YKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 C CG++ +C C + +++ YA KLL E++ + V PRLKL Sbjct: 541 VVELVCSHCGMIATYDKQRNVAFCSTCGADTDIYPVEMSYAFKLLLDEIKSLGVAPRLKL 600 Query: 530 DD 535 +D Sbjct: 601 ED 602 [239][TOP] >UniRef100_UPI000151B416 hypothetical protein PGUG_02833 n=1 Tax=Pichia guilliermondii ATCC 6260 RepID=UPI000151B416 Length = 1291 Score = 175 bits (443), Expect = 2e-42 Identities = 87/164 (53%), Positives = 109/164 (66%), Gaps = 7/164 (4%) Frame = +2 Query: 53 EDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPRA 232 E ++ L GY G ++ Y G TG+ L A VF GP +YQ+L+HMV DK+HARARGP Sbjct: 1117 EAVSKLLREHGYQSRGFEVMYHGHTGKKLMAQVFFGPTYYQRLRHMVDDKIHARARGPVQ 1176 Query: 233 LLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY- 409 +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+ Sbjct: 1177 VLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAGFLKERLMEASDAFRVHVCGVCGLMSVI 1236 Query: 410 ------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 + C+ C+ + + IPYA KLLFQEL MN+ PRL Sbjct: 1237 ANLKKNQFECRSCKNKTNIYQIHIPYAAKLLFQELMAMNISPRL 1280 [240][TOP] >UniRef100_A3DMP3 DNA-directed RNA polymerase n=1 Tax=Staphylothermus marinus F1 RepID=A3DMP3_STAMF Length = 1156 Score = 175 bits (443), Expect = 2e-42 Identities = 88/182 (48%), Positives = 118/182 (64%), Gaps = 6/182 (3%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EG+F T F + I++ L GY SG + Y G TGE L+ +F G ++YQKL H Sbjct: 970 EGRFVDATPFHKEPIDNLMITLKRHGYPMSGYETMYDGRTGEILKTPIFIGIVYYQKLHH 1029 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV DK+HARARGP +LTRQPTEGR+++GGLR GEME DCL+G+GAS+LL E+++ SD Sbjct: 1030 MVADKIHARARGPVQILTRQPTEGRAKEGGLRFGEMEVDCLVGHGASLLLKEQMLDKSDK 1089 Query: 368 FTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 T+Y C CG +GY K C + + +++ YA KLL QEL M ++PRLKL Sbjct: 1090 TTIYVCELCGHIGYYDRIRGKYMCPIHKDKGKLKPVEVSYAFKLLVQELMSMCIMPRLKL 1149 Query: 530 DD 535 +D Sbjct: 1150 ED 1151 [241][TOP] >UniRef100_A2BN33 DNA-directed RNA polymerase n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BN33_HYPBU Length = 1138 Score = 175 bits (443), Expect = 2e-42 Identities = 88/178 (49%), Positives = 120/178 (67%), Gaps = 6/178 (3%) Frame = +2 Query: 14 KFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMV 193 +F GT F + IE+ L+ GY+ G ++ Y G TGE +R + G ++YQKL HMV Sbjct: 953 RFVDGTPFAKESIENLRIELLKTGYAPDGTEIMYDGRTGEMIRTPILIGLVYYQKLHHMV 1012 Query: 194 KDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFT 373 DK+HARARGP +LTRQPTEGR+R+GGLR GEMERDCL+G+GA+MLL ER++ SSD + Sbjct: 1013 ADKIHARARGPVQVLTRQPTEGRAREGGLRFGEMERDCLVGHGAAMLLRERMLESSDRYV 1072 Query: 374 VYACGTCGLLGY-----KGW-CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 +Y C CG + + +G+ C ++A+ +PYA KLL QEL M ++PRLKL Sbjct: 1073 LYVCELCGHIAWFDRNKRGYICPVHGDKGKIAAVIVPYAFKLLLQELMSMCIMPRLKL 1130 [242][TOP] >UniRef100_C7NTX9 RNA polymerase Rpb2 domain 6 n=2 Tax=Halorhabdus utahensis RepID=C7NTX9_HALUD Length = 608 Score = 175 bits (443), Expect = 2e-42 Identities = 86/182 (47%), Positives = 121/182 (66%), Gaps = 6/182 (3%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EG+ GTAF G+ ED ++L G+ SGK++ YSG TGE + A +F G IFYQKL H Sbjct: 425 EGRRVDGTAFTGEDEEDLRDSLEDHGFDSSGKEVMYSGITGEKVEAEIFVGNIFYQKLYH 484 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV +K+HAR+RGP +LTRQPTEGR+R+GGLR+GEMERD IG+GA++ L ERL+ SD Sbjct: 485 MVSNKIHARSRGPVQVLTRQPTEGRAREGGLRIGEMERDVFIGHGAALTLKERLLDESDQ 544 Query: 368 FTVYACGTCGLLGYKG------WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 ++ CG CG+ + +C C V +++ YA KLL E++ + + PR++L Sbjct: 545 EWIHVCGQCGMTAVENVDQRRVYCPNCDEETDVHEVEMSYAFKLLLDEMKALGIAPRIEL 604 Query: 530 DD 535 +D Sbjct: 605 ED 606 [243][TOP] >UniRef100_C5NSC6 DNA-directed RNA polymerase n=1 Tax=Halococcus hamelinensis RepID=C5NSC6_9EURY Length = 613 Score = 175 bits (443), Expect = 2e-42 Identities = 89/182 (48%), Positives = 118/182 (64%), Gaps = 6/182 (3%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EG+ GTAF G+ E+ AL G+ SGK+ YSG TGE + A +F G IFYQKL H Sbjct: 430 EGRRVDGTAFTGEEEEELRGALEDHGFDSSGKERMYSGVTGEKIDAEIFVGTIFYQKLYH 489 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV +K+HAR+RGP +LTRQPTEGR+R+GGLR+GEMERD LIG+GA+M L ERL+ SD Sbjct: 490 MVSNKIHARSRGPVQVLTRQPTEGRAREGGLRVGEMERDVLIGHGAAMALKERLLDESDR 549 Query: 368 FTVYACGTCGLLGYKG------WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 +Y CG CG+ + +C C + +++ YA KLL E++ + + PRL L Sbjct: 550 EFIYVCGNCGMSAVENVEQRRVYCPNCGEETDIHEIEMSYAFKLLLDEMKALGIAPRLDL 609 Query: 530 DD 535 D Sbjct: 610 ID 611 [244][TOP] >UniRef100_A5DHT2 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Pichia guilliermondii RepID=RPB2_PICGU Length = 1236 Score = 175 bits (443), Expect = 2e-42 Identities = 87/164 (53%), Positives = 109/164 (66%), Gaps = 7/164 (4%) Frame = +2 Query: 53 EDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPRA 232 E ++ L GY G ++ Y G TG+ L A VF GP +YQ+L+HMV DK+HARARGP Sbjct: 1062 EAVSKLLREHGYQSRGFEVMYHGHTGKKLMAQVFFGPTYYQRLRHMVDDKIHARARGPVQ 1121 Query: 233 LLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY- 409 +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+ Sbjct: 1122 VLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAGFLKERLMEASDAFRVHVCGVCGLMSVI 1181 Query: 410 ------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 + C+ C+ + + IPYA KLLFQEL MN+ PRL Sbjct: 1182 ANLKKNQFECRSCKNKTNIYQIHIPYAAKLLFQELMAMNISPRL 1225 [245][TOP] >UniRef100_Q54J75 DNA-directed RNA polymerase II subunit rpb2 n=1 Tax=Dictyostelium discoideum RepID=RPB2_DICDI Length = 1170 Score = 175 bits (443), Expect = 2e-42 Identities = 85/184 (46%), Positives = 116/184 (63%), Gaps = 13/184 (7%) Frame = +2 Query: 11 GKFRMGTAFDGDR-------IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIF 169 GK T +GD +E ++AL GY +G ++ Y+G TG + A +F GP + Sbjct: 983 GKVSASTGDEGDATPFTDVTVEAISQALHKIGYQMTGHEVMYNGHTGRRMDAQIFIGPTY 1042 Query: 170 YQKLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERL 349 YQ+LKHMV DK+H+R+RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL Sbjct: 1043 YQRLKHMVDDKIHSRSRGPVQILTRQPVEGRSRDGGLRFGEMERDCMISHGAAQFLKERL 1102 Query: 350 MHSSDVFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNV 511 SD + V+ C CGL+ C+ C+ +S +++PYA KLLFQEL M++ Sbjct: 1103 FDQSDSYRVHICDICGLIAIANLKKNSFECRRCKNKTQISQIRMPYAAKLLFQELMSMSI 1162 Query: 512 VPRL 523 PR+ Sbjct: 1163 APRM 1166 [246][TOP] >UniRef100_UPI0000221AC5 hypothetical protein CBG18197 n=1 Tax=Caenorhabditis briggsae AF16 RepID=UPI0000221AC5 Length = 1194 Score = 174 bits (442), Expect = 3e-42 Identities = 87/180 (48%), Positives = 114/180 (63%), Gaps = 7/180 (3%) Frame = +2 Query: 5 HEGKFRMGTAF-DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 ++G+ T F D ++ + L GY G ++ Y+G TG+ L +F GP +YQ+L Sbjct: 998 NKGEIGDATPFNDTVNVQKISGLLCEYGYHLRGNEVMYNGHTGKKLTTQIFFGPTYYQRL 1057 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DK+H+RARGP ++ RQP EGR+RDGGLR GEMERDC I +GA+ L ERL S Sbjct: 1058 KHMVDDKIHSRARGPIQMMNRQPMEGRARDGGLRFGEMERDCQISHGATQFLRERLFEVS 1117 Query: 362 DVFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 D + VY C CGL+ C+ CR VSA++IPYACKLLFQEL M++ PRL Sbjct: 1118 DPYHVYVCNNCGLIVVANLRTNSFECKACRNKTQVSAVRIPYACKLLFQELMSMSIAPRL 1177 [247][TOP] >UniRef100_Q1L5Z4 DNA-directed RNA polymerase n=1 Tax=Nicotiana sylvestris RepID=Q1L5Z4_NICSY Length = 1203 Score = 174 bits (442), Expect = 3e-42 Identities = 87/184 (47%), Positives = 111/184 (60%), Gaps = 6/184 (3%) Frame = +2 Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184 H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK Sbjct: 1011 HMGKEGDATPFTDVTVDNISKALHRCGYQMRGFERMYNGHTGRVLTAMIFLGPTYYQRLK 1070 Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364 HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD Sbjct: 1071 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1130 Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526 + V+ C CGL+ C+ CR + IPYACKLL QEL M + PR+ Sbjct: 1131 AYRVHVCQQCGLIAIANLKKMSFECRSCRNKTDNVQVYIPYACKLLIQELMSMAIAPRML 1190 Query: 527 LDDP 538 +P Sbjct: 1191 TKEP 1194 [248][TOP] >UniRef100_Q1ANF0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coleochaete scutata RepID=Q1ANF0_COLSC Length = 702 Score = 174 bits (442), Expect = 3e-42 Identities = 85/179 (47%), Positives = 115/179 (64%), Gaps = 6/179 (3%) Frame = +2 Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184 H G+ T F +++ ++AL GY G + Y+G TG L+A +F GP +YQ+LK Sbjct: 485 HIGREGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRKLQAQIFLGPTYYQRLK 544 Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364 HMV DK+H+RARGP +LTRQP EGR++DGGLR GEMERDC+I +GA+ + ERL SD Sbjct: 545 HMVDDKIHSRARGPVQILTRQPAEGRAKDGGLRFGEMERDCMIAHGAAHFMKERLFDQSD 604 Query: 365 VFTVYACGTCGLLGY----KGW--CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 + V+ C CGL+ KG C+ C+ + + IPYACKLLFQEL M + PR+ Sbjct: 605 AYRVHVCEICGLIAIANLKKGTFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM 663 [249][TOP] >UniRef100_A8XS50 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae RepID=A8XS50_CAEBR Length = 1215 Score = 174 bits (442), Expect = 3e-42 Identities = 87/180 (48%), Positives = 114/180 (63%), Gaps = 7/180 (3%) Frame = +2 Query: 5 HEGKFRMGTAF-DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181 ++G+ T F D ++ + L GY G ++ Y+G TG+ L +F GP +YQ+L Sbjct: 1019 NKGEIGDATPFNDTVNVQKISGLLCEYGYHLRGNEVMYNGHTGKKLTTQIFFGPTYYQRL 1078 Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361 KHMV DK+H+RARGP ++ RQP EGR+RDGGLR GEMERDC I +GA+ L ERL S Sbjct: 1079 KHMVDDKIHSRARGPIQMMNRQPMEGRARDGGLRFGEMERDCQISHGATQFLRERLFEVS 1138 Query: 362 DVFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523 D + VY C CGL+ C+ CR VSA++IPYACKLLFQEL M++ PRL Sbjct: 1139 DPYHVYVCNNCGLIVVANLRTNSFECKACRNKTQVSAVRIPYACKLLFQELMSMSIAPRL 1198 [250][TOP] >UniRef100_C5NSD1 DNA-directed RNA polymerase n=1 Tax=Halococcus thailandensis RepID=C5NSD1_9EURY Length = 611 Score = 174 bits (442), Expect = 3e-42 Identities = 87/182 (47%), Positives = 121/182 (66%), Gaps = 6/182 (3%) Frame = +2 Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187 EG+ GTAF G+ E+ ++L G+ SGK++ +SG TGE + A +F G IFYQKL H Sbjct: 428 EGRRVDGTAFTGEEEEELRDSLEEHGFDSSGKEIMHSGVTGEKIDAEIFVGTIFYQKLYH 487 Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367 MV +K+HAR+RGP +LTRQPTEGR+R+GGLR+GEMERD LIG+GA+M L ERL+ SD Sbjct: 488 MVSNKIHARSRGPVQVLTRQPTEGRAREGGLRVGEMERDVLIGHGAAMALKERLLDESDR 547 Query: 368 FTVYACGTCGLLGYKG------WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529 +Y CG CG+ + +C C + +++ YA KLL E++ + + PRL+L Sbjct: 548 EFIYVCGECGMSAVENVEQRRVYCPNCGEETDIHEIEMSYAFKLLLDEMKALGIAPRLEL 607 Query: 530 DD 535 D Sbjct: 608 LD 609