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[1][TOP] >UniRef100_UPI0001B7C0A8 Ab1-108. n=1 Tax=Rattus norvegicus RepID=UPI0001B7C0A8 Length = 331 Score = 113 bits (282), Expect = 7e-24 Identities = 56/89 (62%), Positives = 66/89 (74%) Frame = +2 Query: 20 PRRCSPTSSFDVGDVSLALCCPCPPSNMIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGD 199 P R P + F+ L P + MIIPVRCFTCGK++GNK +AYL LL+ ++ EGD Sbjct: 242 PLREGPGAGFE----KLLPAACTPDAAMIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGD 297 Query: 200 ALDKLGLKRYCCRRMLLAHVDLIEKLLSY 286 ALD LGLKRYCCRRMLLAHVDLIEKLL+Y Sbjct: 298 ALDALGLKRYCCRRMLLAHVDLIEKLLNY 326 [2][TOP] >UniRef100_Q7TPA2 Ab1-108 n=1 Tax=Rattus norvegicus RepID=Q7TPA2_RAT Length = 323 Score = 113 bits (282), Expect = 7e-24 Identities = 56/89 (62%), Positives = 66/89 (74%) Frame = +2 Query: 20 PRRCSPTSSFDVGDVSLALCCPCPPSNMIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGD 199 P R P + F+ L P + MIIPVRCFTCGK++GNK +AYL LL+ ++ EGD Sbjct: 234 PLREGPGAGFE----KLLPAACTPDAAMIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGD 289 Query: 200 ALDKLGLKRYCCRRMLLAHVDLIEKLLSY 286 ALD LGLKRYCCRRMLLAHVDLIEKLL+Y Sbjct: 290 ALDALGLKRYCCRRMLLAHVDLIEKLLNY 318 [3][TOP] >UniRef100_B7FTZ0 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FTZ0_PHATR Length = 73 Score = 112 bits (279), Expect = 2e-23 Identities = 51/62 (82%), Positives = 57/62 (91%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK + YL LL+ D++EGDALD+LGLKRYCCRRMLL HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWETYLSLLQADYSEGDALDELGLKRYCCRRMLLTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [4][TOP] >UniRef100_UPI0000E48653 PREDICTED: similar to RNA polymerase II subunit n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E48653 Length = 67 Score = 111 bits (278), Expect = 2e-23 Identities = 51/62 (82%), Positives = 58/62 (93%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKV+GNK +AYL LL+ +++EGDALD LGLKRYCCRRMLLAHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVVGNKWEAYLGLLQAEYSEGDALDALGLKRYCCRRMLLAHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [5][TOP] >UniRef100_B3RID1 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RID1_TRIAD Length = 67 Score = 110 bits (276), Expect = 4e-23 Identities = 50/62 (80%), Positives = 57/62 (91%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGKVIGNK +AYL LL+ ++ EGDALD LGLKRYCCRRMLL+HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVIGNKWEAYLHLLQAEYTEGDALDALGLKRYCCRRMLLSHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [6][TOP] >UniRef100_P62875 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=11 Tax=Euteleostomi RepID=RPAB5_HUMAN Length = 67 Score = 110 bits (276), Expect = 4e-23 Identities = 50/62 (80%), Positives = 57/62 (91%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGK++GNK +AYL LL+ ++ EGDALD LGLKRYCCRRMLLAHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [7][TOP] >UniRef100_UPI0001926189 PREDICTED: similar to DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=1 Tax=Hydra magnipapillata RepID=UPI0001926189 Length = 67 Score = 110 bits (275), Expect = 5e-23 Identities = 49/62 (79%), Positives = 58/62 (93%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGKV+GNK ++YL LL+ +++EGDALD LGLKRYCCRRMLLAHVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVVGNKWESYLGLLQAEYSEGDALDSLGLKRYCCRRMLLAHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [8][TOP] >UniRef100_UPI00015B63F1 RNA polymerase II subunit 10 n=1 Tax=Nasonia vitripennis RepID=UPI00015B63F1 Length = 67 Score = 110 bits (275), Expect = 5e-23 Identities = 51/62 (82%), Positives = 56/62 (90%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK +AYL LL+ ++ EGDALD LGLKRYCCRRMLL HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWEAYLGLLQAEYTEGDALDSLGLKRYCCRRMLLGHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [9][TOP] >UniRef100_Q4SI58 Chromosome 5 SCAF14581, whole genome shotgun sequence n=1 Tax=Tetraodon nigroviridis RepID=Q4SI58_TETNG Length = 67 Score = 110 bits (275), Expect = 5e-23 Identities = 48/62 (77%), Positives = 58/62 (93%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGK++GNK +AYL LL++++ EGDALD LGLKRYCCRRMLL+HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKIVGNKWEAYLRLLQSEYTEGDALDALGLKRYCCRRMLLSHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [10][TOP] >UniRef100_Q1ECU1 MGC146599 protein n=1 Tax=Xenopus (Silurana) tropicalis RepID=Q1ECU1_XENTR Length = 67 Score = 110 bits (274), Expect = 6e-23 Identities = 50/62 (80%), Positives = 57/62 (91%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKV+GNK +AYL LL+ ++ EGDALD LGLKRYCCRRMLL+HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLSHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [11][TOP] >UniRef100_B4NL38 GK14032 n=1 Tax=Drosophila willistoni RepID=B4NL38_DROWI Length = 67 Score = 110 bits (274), Expect = 6e-23 Identities = 50/62 (80%), Positives = 56/62 (90%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGKVIGNK ++YL LL+ D+ EGDALD LGLKRYCCRRMLL HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVIGNKWESYLGLLQADYTEGDALDALGLKRYCCRRMLLGHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [12][TOP] >UniRef100_B0WG50 DNA-directed RNA polymerase II 7.6 kDa polypeptide n=5 Tax=Arthropoda RepID=B0WG50_CULQU Length = 67 Score = 110 bits (274), Expect = 6e-23 Identities = 51/62 (82%), Positives = 56/62 (90%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK +AYL LL+ ++ EGDALD LGLKRYCCRRMLL HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLGHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [13][TOP] >UniRef100_UPI0000022BA0 PREDICTED: similar to RNA polymerase II subunit n=1 Tax=Mus musculus RepID=UPI0000022BA0 Length = 67 Score = 109 bits (273), Expect = 8e-23 Identities = 50/62 (80%), Positives = 56/62 (90%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGK++GNK +AYL LL+ + EGDALD LGLKRYCCRRMLLAHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGLLQAKYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [14][TOP] >UniRef100_B5FYX8 Putative DNA directed RNA polymerase II polypeptide L variant 1 n=1 Tax=Taeniopygia guttata RepID=B5FYX8_TAEGU Length = 67 Score = 109 bits (273), Expect = 8e-23 Identities = 49/62 (79%), Positives = 57/62 (91%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGK++GNK +AYL LL+ ++ EGDALD LGLKRYCCR+MLLAHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRKMLLAHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [15][TOP] >UniRef100_A5D6S6 Zgc:112305 protein n=2 Tax=Clupeocephala RepID=A5D6S6_DANRE Length = 67 Score = 109 bits (273), Expect = 8e-23 Identities = 49/62 (79%), Positives = 57/62 (91%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGK++GNK +AYL LL+ ++ EGDALD LGLKRYCCRRMLL+HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLSHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [16][TOP] >UniRef100_A7SLP4 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SLP4_NEMVE Length = 67 Score = 109 bits (273), Expect = 8e-23 Identities = 49/62 (79%), Positives = 57/62 (91%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGKV+GNK +AYL LL+ ++ EGDALD LGLKRYCCRRMLL+HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLSHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [17][TOP] >UniRef100_UPI000001372F UPI000001372F related cluster n=1 Tax=Takifugu rubripes RepID=UPI000001372F Length = 67 Score = 109 bits (272), Expect = 1e-22 Identities = 48/62 (77%), Positives = 57/62 (91%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGK++GNK +AYL LL+ ++ EGDALD LGLKRYCCRRMLL+HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLSHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [18][TOP] >UniRef100_B8C402 DNA directed RNA polymerase II subunit, 8.2kDa, rpb10-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C402_THAPS Length = 64 Score = 109 bits (272), Expect = 1e-22 Identities = 49/62 (79%), Positives = 57/62 (91%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK + YL LL+ D++EGDALD+LGL+RYCCRRM+L HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWETYLYLLQADYSEGDALDELGLRRYCCRRMMLTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [19][TOP] >UniRef100_Q502D4 Zgc:112305 protein n=1 Tax=Danio rerio RepID=Q502D4_DANRE Length = 67 Score = 108 bits (271), Expect = 1e-22 Identities = 49/62 (79%), Positives = 56/62 (90%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGK++GNK +AYL LL+ ++ EGDALD LGLKRYCCRRMLL HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLPHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [20][TOP] >UniRef100_C3Y645 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3Y645_BRAFL Length = 68 Score = 108 bits (271), Expect = 1e-22 Identities = 50/62 (80%), Positives = 56/62 (90%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGKVIGNK + YL LL+ D+ EGDALD LGLKRYCCRRMLL+HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVIGNKWEWYLGLLQADYTEGDALDALGLKRYCCRRMLLSHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [21][TOP] >UniRef100_Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=11 Tax=Drosophila RepID=RPAB5_DROME Length = 67 Score = 108 bits (270), Expect = 2e-22 Identities = 49/62 (79%), Positives = 56/62 (90%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGKVIGNK ++YL LL+ ++ EGDALD LGLKRYCCRRMLL HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVIGNKWESYLGLLQAEYTEGDALDALGLKRYCCRRMLLGHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [22][TOP] >UniRef100_B5XBF2 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=1 Tax=Salmo salar RepID=B5XBF2_SALSA Length = 67 Score = 108 bits (269), Expect = 2e-22 Identities = 49/62 (79%), Positives = 56/62 (90%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGK++GNK +AYL L+ ++ EGDALD LGLKRYCCRRMLLAHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGPLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [23][TOP] >UniRef100_C6T2Z9 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6T2Z9_SOYBN Length = 71 Score = 108 bits (269), Expect = 2e-22 Identities = 49/62 (79%), Positives = 56/62 (90%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK YL+LL++D++EGDALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQSDYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [24][TOP] >UniRef100_B9T3C0 DNA-directed RNA polymerase II, subunit n, putative n=1 Tax=Ricinus communis RepID=B9T3C0_RICCO Length = 76 Score = 107 bits (268), Expect = 3e-22 Identities = 49/62 (79%), Positives = 55/62 (88%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK YL+LL+ D++EGDALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [25][TOP] >UniRef100_Q55AB6 DNA-directed RNA polymerases I, II, and III subunit rpabc5 n=1 Tax=Dictyostelium discoideum RepID=RPAB5_DICDI Length = 70 Score = 107 bits (268), Expect = 3e-22 Identities = 51/62 (82%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK AYL LL+ D+ EGDALD L LKRYCCRRMLL HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDAYLSLLQIDYTEGDALDALCLKRYCCRRMLLTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [26][TOP] >UniRef100_UPI0001982A1C PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001982A1C Length = 71 Score = 107 bits (267), Expect = 4e-22 Identities = 49/62 (79%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK YL+LL+ D+ EGDALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [27][TOP] >UniRef100_Q1EP53 DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative n=1 Tax=Musa balbisiana RepID=Q1EP53_MUSBA Length = 70 Score = 107 bits (267), Expect = 4e-22 Identities = 49/62 (79%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK YL+LL+ D+ EGDALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [28][TOP] >UniRef100_A9PF10 Predicted protein n=1 Tax=Populus trichocarpa RepID=A9PF10_POPTR Length = 71 Score = 107 bits (267), Expect = 4e-22 Identities = 49/62 (79%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK YL+LL+ D+ EGDALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [29][TOP] >UniRef100_A9NJU8 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=A9NJU8_PICSI Length = 71 Score = 107 bits (267), Expect = 4e-22 Identities = 49/62 (79%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK YL+LL+ D+ EGDALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [30][TOP] >UniRef100_A7QP02 Chromosome chr1 scaffold_135, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7QP02_VITVI Length = 78 Score = 107 bits (267), Expect = 4e-22 Identities = 49/62 (79%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK YL+LL+ D+ EGDALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [31][TOP] >UniRef100_Q9SYA6 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=1 Tax=Arabidopsis thaliana RepID=RPAB5_ARATH Length = 71 Score = 107 bits (267), Expect = 4e-22 Identities = 49/62 (79%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MI+PVRCFTCGKVIGNK YLELL+ D+ EGDALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIVPVRCFTCGKVIGNKWDTYLELLQADYAEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [32][TOP] >UniRef100_Q53LH8 DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative, expressed n=1 Tax=Oryza sativa Japonica Group RepID=Q53LH8_ORYSJ Length = 74 Score = 107 bits (266), Expect = 5e-22 Identities = 49/62 (79%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK YL+LL+ D+ EGDALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [33][TOP] >UniRef100_Q0IPN4 Os12g0180400 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0IPN4_ORYSJ Length = 72 Score = 107 bits (266), Expect = 5e-22 Identities = 49/62 (79%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK YL+LL+ D+ EGDALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [34][TOP] >UniRef100_B9G9U1 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9G9U1_ORYSJ Length = 74 Score = 107 bits (266), Expect = 5e-22 Identities = 49/62 (79%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK YL+LL+ D+ EGDALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKGDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [35][TOP] >UniRef100_UPI00006A4791 PREDICTED: similar to MGC146599 protein n=1 Tax=Ciona intestinalis RepID=UPI00006A4791 Length = 67 Score = 106 bits (265), Expect = 7e-22 Identities = 48/62 (77%), Positives = 55/62 (88%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGKV+GNK YL LL+ ++ EGDALD LGLKRYCCRRMLL+HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVVGNKWDKYLGLLQQEYTEGDALDALGLKRYCCRRMLLSHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [36][TOP] >UniRef100_UPI0001791AD9 PREDICTED: similar to DNA-directed RNA polymerases I, II, and III subunit RPABC5 (RNA polymerases I, II, and III subunit ABC5) (RPB10) n=1 Tax=Acyrthosiphon pisum RepID=UPI0001791AD9 Length = 67 Score = 106 bits (264), Expect = 9e-22 Identities = 48/62 (77%), Positives = 55/62 (88%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGKVI NK ++YL LL+ ++ EGDALD LGLKRYCCRRMLL HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVIANKWESYLGLLQAEYTEGDALDALGLKRYCCRRMLLGHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [37][TOP] >UniRef100_Q39290 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=1 Tax=Brassica napus RepID=RPAB5_BRANA Length = 71 Score = 106 bits (264), Expect = 9e-22 Identities = 49/62 (79%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK AYL+LL+ D+ EGDALD L L RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALNLVRYCCRRMLMTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [38][TOP] >UniRef100_UPI0000022F74 PREDICTED: similar to RNA polymerase II subunit n=1 Tax=Mus musculus RepID=UPI0000022F74 Length = 67 Score = 105 bits (263), Expect = 1e-21 Identities = 48/62 (77%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCF CGK +GNK +AYL LL+ ++ EGDALD LGLKRYCCRR LLAHVDLIEKLL Sbjct: 1 MIIPVRCFICGKTVGNKREAYLGLLQAEYTEGDALDALGLKRYCCRRTLLAHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [39][TOP] >UniRef100_Q9GR61 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=2 Tax=Caenorhabditis RepID=RPAB5_CAEEL Length = 67 Score = 105 bits (263), Expect = 1e-21 Identities = 47/62 (75%), Positives = 57/62 (91%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGKVIG+K + YL L+++++EGDALD LGL+RYCCRRMLLAHVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVIGDKWETYLGFLQSEYSEGDALDALGLRRYCCRRMLLAHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [40][TOP] >UniRef100_A9SS45 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SS45_PHYPA Length = 73 Score = 105 bits (262), Expect = 2e-21 Identities = 48/62 (77%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK YL+LL+ D++EGDALD L L RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALALVRYCCRRMLMTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [41][TOP] >UniRef100_C1BQB9 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=1 Tax=Caligus rogercresseyi RepID=C1BQB9_9MAXI Length = 67 Score = 104 bits (260), Expect = 3e-21 Identities = 48/62 (77%), Positives = 55/62 (88%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGK+IGNK +AYL LL+ ++ EGDALD LGLKR CCRRMLL HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKLIGNKWEAYLGLLQAEYTEGDALDALGLKRPCCRRMLLGHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [42][TOP] >UniRef100_C0PFY7 Putative uncharacterized protein n=1 Tax=Zea mays RepID=C0PFY7_MAIZE Length = 242 Score = 104 bits (259), Expect = 3e-21 Identities = 48/64 (75%), Positives = 55/64 (85%) Frame = +2 Query: 95 SNMIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEK 274 + MIIPVRCFTCGKVIGNK YL+LL+ D++EGDALD L L RYCCRRML+ HVDLIEK Sbjct: 170 AKMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEK 229 Query: 275 LLSY 286 LL+Y Sbjct: 230 LLNY 233 [43][TOP] >UniRef100_B6UDG2 DNA-directed RNA polymerase II 8.2 kDa polypeptide n=1 Tax=Zea mays RepID=B6UDG2_MAIZE Length = 71 Score = 104 bits (259), Expect = 3e-21 Identities = 48/62 (77%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK YL+LL+ D++EGDALD L L RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDVYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [44][TOP] >UniRef100_B6TZT5 DNA-directed RNA polymerase II 8.2 kDa polypeptide n=1 Tax=Zea mays RepID=B6TZT5_MAIZE Length = 84 Score = 103 bits (258), Expect = 5e-21 Identities = 48/62 (77%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK YL+LL+ D++EGDALD L L RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [45][TOP] >UniRef100_B4FJG4 DNA-directed RNA polymerase II 8.2 kDa polypeptide n=2 Tax=Andropogoneae RepID=B4FJG4_MAIZE Length = 71 Score = 103 bits (258), Expect = 5e-21 Identities = 48/62 (77%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK YL+LL+ D++EGDALD L L RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [46][TOP] >UniRef100_C4PZC4 DNA-directed rna polymerase II, subunit n, putative n=2 Tax=Schistosoma RepID=C4PZC4_SCHMA Length = 67 Score = 103 bits (258), Expect = 5e-21 Identities = 45/62 (72%), Positives = 57/62 (91%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGKV+G+K ++Y+ LL+ ++ EGDALD LGL+RYCCRRMLL+HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVVGDKWESYIGLLQAEYAEGDALDTLGLRRYCCRRMLLSHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [47][TOP] >UniRef100_UPI000021E311 PREDICTED: similar to DNA-directed RNA polymerase II 7.6 kDa polypeptide (RPB10) (RPB7.6) (RPABC5) n=1 Tax=Rattus norvegicus RepID=UPI000021E311 Length = 67 Score = 103 bits (257), Expect = 6e-21 Identities = 47/62 (75%), Positives = 55/62 (88%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGK++GNK +AYL LL+ ++ EG ALD LGLK YCCRR+LLAHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGHALDALGLKCYCCRRVLLAHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [48][TOP] >UniRef100_Q8LFJ6 RNA polymerase II subunit (HsRPB10), putative n=1 Tax=Arabidopsis thaliana RepID=Q8LFJ6_ARATH Length = 71 Score = 103 bits (257), Expect = 6e-21 Identities = 48/62 (77%), Positives = 53/62 (85%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK YL+LL+ D+ EGDALD L L RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDQYLDLLQLDYTEGDALDALQLVRYCCRRMLMTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [49][TOP] >UniRef100_A4S4C4 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S4C4_OSTLU Length = 71 Score = 103 bits (257), Expect = 6e-21 Identities = 47/62 (75%), Positives = 53/62 (85%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK YL+LL+ D++E DALD LGL RYCCRRM++ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSERDALDALGLNRYCCRRMVMCHVDLIEKLL 60 Query: 281 SY 286 Y Sbjct: 61 RY 62 [50][TOP] >UniRef100_A8ND17 DNA-directed RNA polymerase II 7.6 kDa polypeptide, putative n=1 Tax=Brugia malayi RepID=A8ND17_BRUMA Length = 67 Score = 103 bits (256), Expect = 8e-21 Identities = 47/62 (75%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGKVIGNK AYL LL+ +++EGDALD L L+RYCCRRMLL+HVDLI KLL Sbjct: 1 MIIPIRCFTCGKVIGNKWDAYLGLLQAEYSEGDALDALNLRRYCCRRMLLSHVDLIVKLL 60 Query: 281 SY 286 Y Sbjct: 61 DY 62 [51][TOP] >UniRef100_B6JYU5 DNA-directed RNA polymerase I n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JYU5_SCHJY Length = 71 Score = 103 bits (256), Expect = 8e-21 Identities = 47/62 (75%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCF+CGKVIG+K YL LL+ D+ EG+ALDKLGL+RYCCRRM+L HVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVIGDKWDTYLTLLQEDNTEGEALDKLGLQRYCCRRMILTHVDLIEKLL 60 Query: 281 SY 286 Y Sbjct: 61 CY 62 [52][TOP] >UniRef100_B0DBE9 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0DBE9_LACBS Length = 75 Score = 103 bits (256), Expect = 8e-21 Identities = 49/62 (79%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCF+CGKVIG+K AYLELL D +EGDALD+L LKRYCCRRM+L HVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVIGDKWSAYLELLAKDVSEGDALDELQLKRYCCRRMVLTHVDLIEKLL 60 Query: 281 SY 286 Y Sbjct: 61 HY 62 [53][TOP] >UniRef100_C1N0B9 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N0B9_9CHLO Length = 74 Score = 102 bits (255), Expect = 1e-20 Identities = 47/62 (75%), Positives = 53/62 (85%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK YL+LL+ D++E DALD L L RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSERDALDALDLNRYCCRRMLMCHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [54][TOP] >UniRef100_O13877 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=1 Tax=Schizosaccharomyces pombe RepID=RPAB5_SCHPO Length = 71 Score = 102 bits (255), Expect = 1e-20 Identities = 46/62 (74%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCF+CGKVIG+K YL LL+ D+ EG+ALDKLGL+RYCCRRM+L HVDLIEKLL Sbjct: 1 MIIPIRCFSCGKVIGDKWDTYLTLLQEDNTEGEALDKLGLQRYCCRRMILTHVDLIEKLL 60 Query: 281 SY 286 Y Sbjct: 61 CY 62 [55][TOP] >UniRef100_Q8MPD0 Putative RNA polymerase subunit n=1 Tax=Taenia solium RepID=Q8MPD0_TAESO Length = 67 Score = 102 bits (254), Expect = 1e-20 Identities = 44/62 (70%), Positives = 56/62 (90%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGKV+G+K ++YL LL+ ++ E DALD LGL+RYCCRRM+L+HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVVGDKWESYLVLLQAEYTEADALDTLGLRRYCCRRMILSHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [56][TOP] >UniRef100_C1FJT8 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FJT8_9CHLO Length = 69 Score = 102 bits (253), Expect = 2e-20 Identities = 47/62 (75%), Positives = 52/62 (83%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK YL+LL+ D+ E DALD L L RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTERDALDALDLHRYCCRRMLMCHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [57][TOP] >UniRef100_B6AD79 DNA-directed RNA polymerases I, II, and III subunit ABC5, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6AD79_9CRYT Length = 72 Score = 101 bits (252), Expect = 2e-20 Identities = 47/62 (75%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGN Q +L LL+ D +EG+ALDKLGL+RYCCRRM+L H DLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNLWQQWLVLLQNDVSEGEALDKLGLRRYCCRRMVLTHADLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 AY 62 [58][TOP] >UniRef100_A8N985 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8N985_COPC7 Length = 478 Score = 101 bits (252), Expect = 2e-20 Identities = 48/62 (77%), Positives = 53/62 (85%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCF+CGKVIG+K YLELL D +EGDALD+L LKRYCCRRM+L HVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVIGDKWNPYLELLAKDMSEGDALDELQLKRYCCRRMVLTHVDLIEKLL 60 Query: 281 SY 286 Y Sbjct: 61 HY 62 [59][TOP] >UniRef100_UPI000194C523 PREDICTED: similar to Ab1-108 n=1 Tax=Taeniopygia guttata RepID=UPI000194C523 Length = 67 Score = 101 bits (251), Expect = 3e-20 Identities = 46/62 (74%), Positives = 53/62 (85%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGK++GNK +A+L + +GDALD LGLKRYCCRRMLLAHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKIVGNKWEAFLGSCRRSTRKGDALDALGLKRYCCRRMLLAHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [60][TOP] >UniRef100_A8HSJ0 DNA-directed RNA polymerases I/II/III subunit n=1 Tax=Chlamydomonas reinhardtii RepID=A8HSJ0_CHLRE Length = 79 Score = 100 bits (250), Expect = 4e-20 Identities = 46/62 (74%), Positives = 53/62 (85%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGNK YL+LL+ ++E +ALD LGL RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQAGYSEQEALDGLGLSRYCCRRMLMTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [61][TOP] >UniRef100_Q98S56 Putative RNA polymerase II subunit Rpb10 n=1 Tax=Guillardia theta RepID=Q98S56_GUITH Length = 71 Score = 100 bits (249), Expect = 5e-20 Identities = 45/62 (72%), Positives = 52/62 (83%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGK+IGNK + YL LL +++E ALD LGL+RYCCRRM+L HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKIIGNKWEIYLRLLNENYSESSALDTLGLQRYCCRRMILTHVDLIEKLL 60 Query: 281 SY 286 Y Sbjct: 61 QY 62 [62][TOP] >UniRef100_C5Y6P3 Putative uncharacterized protein Sb05g005840 n=1 Tax=Sorghum bicolor RepID=C5Y6P3_SORBI Length = 73 Score = 100 bits (248), Expect = 7e-20 Identities = 46/62 (74%), Positives = 53/62 (85%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIG+K AYLEL++ D++E DAL L L RYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGDKWDAYLELVQADYDEEDALTALNLNRYCCRRMLMTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [63][TOP] >UniRef100_UPI0000DA42E6 PREDICTED: similar to DNA-directed RNA polymerase II 7.6 kDa polypeptide (RPB10) (RPB7.6) (RPABC5) n=1 Tax=Rattus norvegicus RepID=UPI0000DA42E6 Length = 67 Score = 99.4 bits (246), Expect = 1e-19 Identities = 46/62 (74%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFT GK++GNK +AYL LL+ ++ EG ALD LGLK YCCRR+LLAHVDLIEKLL Sbjct: 1 MIIPVRCFTWGKIVGNKWEAYLGLLQAEYTEGHALDALGLKCYCCRRVLLAHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [64][TOP] >UniRef100_C5KAN5 DNA-directed RNA polymerase subunit N, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KAN5_9ALVE Length = 69 Score = 99.4 bits (246), Expect = 1e-19 Identities = 45/62 (72%), Positives = 52/62 (83%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGKVIGNK YL LL+ +EG AL +LG++RYCCRRMLL HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVIGNKWDTYLNLLQEGKSEGQALTELGMERYCCRRMLLTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [65][TOP] >UniRef100_A7AN58 RNA polymerases N / 8 kDa subunit family protein n=1 Tax=Babesia bovis RepID=A7AN58_BABBO Length = 73 Score = 99.4 bits (246), Expect = 1e-19 Identities = 46/62 (74%), Positives = 53/62 (85%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGKVIG+ + +LELLK + NEGDALD+L L RYCCRRM+L HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKVIGHLWEQWLELLKQNVNEGDALDRLDLTRYCCRRMILTHVDLIEKLL 60 Query: 281 SY 286 Y Sbjct: 61 VY 62 [66][TOP] >UniRef100_B5FVB1 YALI0B04851p n=1 Tax=Yarrowia lipolytica RepID=B5FVB1_YARLI Length = 105 Score = 99.4 bits (246), Expect = 1e-19 Identities = 45/62 (72%), Positives = 52/62 (83%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCF+CGKV+G+K + YL L+ D +EGDALDKL LKRYCCRRM+L HVDLIEK L Sbjct: 35 MIIPVRCFSCGKVVGDKWETYLTYLQDDMSEGDALDKLELKRYCCRRMILTHVDLIEKFL 94 Query: 281 SY 286 Y Sbjct: 95 RY 96 [67][TOP] >UniRef100_UPI0000DA24CB PREDICTED: similar to DNA-directed RNA polymerase II 7.6 kDa polypeptide (RPB10) (RPB7.6) (RPABC5) n=1 Tax=Rattus norvegicus RepID=UPI0000DA24CB Length = 67 Score = 99.0 bits (245), Expect = 1e-19 Identities = 47/62 (75%), Positives = 52/62 (83%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPV CFTCGK+IGNK +AYL LL+ + EGDALD L LKRYCCR MLLAH DLIEKLL Sbjct: 1 MIIPVCCFTCGKIIGNKWEAYLGLLQAMYTEGDALDTLDLKRYCCRCMLLAHADLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [68][TOP] >UniRef100_A9BK30 Rpb10 n=1 Tax=Cryptophyta RepID=A9BK30_9CRYP Length = 80 Score = 98.6 bits (244), Expect = 2e-19 Identities = 44/62 (70%), Positives = 52/62 (83%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGK+IGNK Y+ELL + ++ ALD LGL+RYCCRRMLL HVDLIEKLL Sbjct: 1 MIIPIRCFTCGKIIGNKWDIYIELLNKNISQSAALDSLGLRRYCCRRMLLTHVDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 AY 62 [69][TOP] >UniRef100_A3FQL9 Putative DNA-directed RNA polymerases I, II, and III 8.3 kDa polypeptide (Fragment) n=1 Tax=Cryptosporidium parvum Iowa II RepID=A3FQL9_CRYPV Length = 72 Score = 98.2 bits (243), Expect = 2e-19 Identities = 45/62 (72%), Positives = 53/62 (85%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIGN Q +L LL+ + EG+ALDKLGL+RYCCRRM+L H DLIEKL+ Sbjct: 1 MIIPVRCFTCGKVIGNLWQPWLVLLQNNVPEGEALDKLGLRRYCCRRMILTHADLIEKLM 60 Query: 281 SY 286 +Y Sbjct: 61 AY 62 [70][TOP] >UniRef100_Q5KMS2 DNA-directed RNA polymerases i, ii, and iii 8.3 kDa polypeptide, putative n=1 Tax=Filobasidiella neoformans RepID=Q5KMS2_CRYNE Length = 69 Score = 98.2 bits (243), Expect = 2e-19 Identities = 46/62 (74%), Positives = 52/62 (83%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCF+CGKVIGN +YLELL +EG+A+DKL LKRYCCRRM+L HVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVIGNLWDSYLELLAAGVDEGEAMDKLQLKRYCCRRMVLTHVDLIEKLL 60 Query: 281 SY 286 Y Sbjct: 61 MY 62 [71][TOP] >UniRef100_C4R009 RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III n=1 Tax=Pichia pastoris GS115 RepID=C4R009_PICPG Length = 72 Score = 97.8 bits (242), Expect = 3e-19 Identities = 45/62 (72%), Positives = 51/62 (82%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCF+CGKV+G+K AYL LL+ EGDALD+L LKRYCCRRM+L HVDLIEK L Sbjct: 1 MIIPVRCFSCGKVVGDKWDAYLRLLEEGKQEGDALDELKLKRYCCRRMVLTHVDLIEKFL 60 Query: 281 SY 286 Y Sbjct: 61 RY 62 [72][TOP] >UniRef100_Q4N5Q3 DNA-directed RNA polymerase subunit N, putative n=1 Tax=Theileria parva RepID=Q4N5Q3_THEPA Length = 87 Score = 97.1 bits (240), Expect = 6e-19 Identities = 46/62 (74%), Positives = 51/62 (82%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIG+ + +LE+LK D EG ALD LGL RYCCRRM+L HVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGHLWEKWLEMLKKDIPEGQALDDLGLTRYCCRRMILTHVDLIEKLL 60 Query: 281 SY 286 Y Sbjct: 61 VY 62 [73][TOP] >UniRef100_C5M2J2 DNA-directed RNA polymerases II subunit n=1 Tax=Candida tropicalis MYA-3404 RepID=C5M2J2_CANTT Length = 72 Score = 96.7 bits (239), Expect = 7e-19 Identities = 45/63 (71%), Positives = 54/63 (85%), Gaps = 1/63 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDH-NEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 MIIP+RCF+CGKV+G+K + YLELL+ + +EGDALDKL LKRYCCRRM+L HVDLIEK Sbjct: 1 MIIPIRCFSCGKVVGDKWETYLELLQDETISEGDALDKLKLKRYCCRRMVLTHVDLIEKF 60 Query: 278 LSY 286 L Y Sbjct: 61 LRY 63 [74][TOP] >UniRef100_Q0UIS5 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UIS5_PHANO Length = 77 Score = 95.9 bits (237), Expect = 1e-18 Identities = 42/73 (57%), Positives = 55/73 (75%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MI+P+RCF+CGKV+G+ + Y++LL + EGDALD +GL+RYCCRRM+L HVDLIEKLL Sbjct: 1 MIVPIRCFSCGKVVGDLWEKYMDLLTEEMAEGDALDAIGLQRYCCRRMILTHVDLIEKLL 60 Query: 281 SYK*SSGAMPRGL 319 Y S R + Sbjct: 61 KYNASEREQARAM 73 [75][TOP] >UniRef100_C1GGT3 DNA-directed RNA polymerases N/8 kDa subunit superfamily protein n=1 Tax=Paracoccidioides brasiliensis Pb18 RepID=C1GGT3_PARBD Length = 173 Score = 95.5 bits (236), Expect = 2e-18 Identities = 43/63 (68%), Positives = 52/63 (82%) Frame = +2 Query: 98 NMIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 NMIIPVRCF+CGKV+G+ + YL+LL +GDA+D+LG KRYCCRRML+ HVDLIEKL Sbjct: 99 NMIIPVRCFSCGKVVGDLWERYLKLLDEGVPDGDAMDQLGCKRYCCRRMLMTHVDLIEKL 158 Query: 278 LSY 286 L Y Sbjct: 159 LRY 161 [76][TOP] >UniRef100_C5DEV5 KLTH0D10076p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DEV5_LACTC Length = 70 Score = 95.1 bits (235), Expect = 2e-18 Identities = 43/63 (68%), Positives = 53/63 (84%), Gaps = 1/63 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDH-NEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 MI+PVRCF+CGKV+G+K +AYL +L+ D +EG AL +LGLKRYCCRRM+L HVDLIEK Sbjct: 1 MIVPVRCFSCGKVVGDKWEAYLNMLQEDELDEGTALSRLGLKRYCCRRMILTHVDLIEKF 60 Query: 278 LSY 286 L Y Sbjct: 61 LRY 63 [77][TOP] >UniRef100_Q6BHF3 DEHA2G19052p n=1 Tax=Debaryomyces hansenii RepID=Q6BHF3_DEBHA Length = 72 Score = 94.7 bits (234), Expect = 3e-18 Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 1/63 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDH-NEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 MIIPVRCF+CGKV+G+K + YLE L+ D EGDALDKL L+RYCCRRM+L HVDLIEK Sbjct: 1 MIIPVRCFSCGKVVGDKWETYLEYLQDDTMTEGDALDKLKLQRYCCRRMVLTHVDLIEKF 60 Query: 278 LSY 286 L Y Sbjct: 61 LRY 63 [78][TOP] >UniRef100_Q4P3X6 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4P3X6_USTMA Length = 155 Score = 94.7 bits (234), Expect = 3e-18 Identities = 45/62 (72%), Positives = 50/62 (80%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCF+CGKVIG+K AYL LL EG+AL +L LKRYCCRRM+L HVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVIGDKWNAYLALLLDGRTEGEALTELDLKRYCCRRMVLTHVDLIEKLL 60 Query: 281 SY 286 Y Sbjct: 61 HY 62 [79][TOP] >UniRef100_C5DXM4 ZYRO0F06226p n=1 Tax=Zygosaccharomyces rouxii CBS 732 RepID=C5DXM4_ZYGRC Length = 70 Score = 94.7 bits (234), Expect = 3e-18 Identities = 43/63 (68%), Positives = 53/63 (84%), Gaps = 1/63 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDH-NEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 MI+PVRCF+CGKV+G+K ++YL +L+ D +EG AL KLGLKRYCCRRM+L HVDLIEK Sbjct: 1 MIVPVRCFSCGKVVGDKWESYLNMLQEDELDEGTALTKLGLKRYCCRRMILTHVDLIEKF 60 Query: 278 LSY 286 L Y Sbjct: 61 LRY 63 [80][TOP] >UniRef100_C4YHE9 DNA-directed RNA polymerases I/II/III subunit 10 n=2 Tax=Candida RepID=C4YHE9_CANAL Length = 72 Score = 94.7 bits (234), Expect = 3e-18 Identities = 44/63 (69%), Positives = 53/63 (84%), Gaps = 1/63 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDH-NEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 MIIP+RCF+CGKV+G+K Q YL+ L+ + +EGDALDKL LKRYCCRRM+L HVDLIEK Sbjct: 1 MIIPIRCFSCGKVVGDKWQTYLDYLQDETLSEGDALDKLKLKRYCCRRMVLTHVDLIEKF 60 Query: 278 LSY 286 L Y Sbjct: 61 LRY 63 [81][TOP] >UniRef100_A5DLA1 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii RepID=A5DLA1_PICGU Length = 72 Score = 94.7 bits (234), Expect = 3e-18 Identities = 44/63 (69%), Positives = 52/63 (82%), Gaps = 1/63 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDH-NEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 MIIP+RCF+CGKV+G+K + YLE L+ D EGDALDKL L+RYCCRRM+L HVDLIEK Sbjct: 1 MIIPIRCFSCGKVVGDKWETYLEYLQDDTMTEGDALDKLKLRRYCCRRMVLTHVDLIEKF 60 Query: 278 LSY 286 L Y Sbjct: 61 LRY 63 [82][TOP] >UniRef100_A3GGI8 DNA-directed RNA Polymerase II subunit L n=1 Tax=Pichia stipitis RepID=A3GGI8_PICST Length = 72 Score = 94.7 bits (234), Expect = 3e-18 Identities = 44/63 (69%), Positives = 52/63 (82%), Gaps = 1/63 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDH-NEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 MIIP+RCF+CGKV+G+K + YLE L+ + EGDALDKL LKRYCCRRM+L HVDLIEK Sbjct: 1 MIIPIRCFSCGKVVGDKWETYLEYLQDESMTEGDALDKLKLKRYCCRRMVLTHVDLIEKF 60 Query: 278 LSY 286 L Y Sbjct: 61 LRY 63 [83][TOP] >UniRef100_P22139 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=4 Tax=Saccharomyces cerevisiae RepID=RPAB5_YEAST Length = 70 Score = 94.7 bits (234), Expect = 3e-18 Identities = 43/63 (68%), Positives = 53/63 (84%), Gaps = 1/63 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDH-NEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 MI+PVRCF+CGKV+G+K ++YL LL+ D +EG AL +LGLKRYCCRRM+L HVDLIEK Sbjct: 1 MIVPVRCFSCGKVVGDKWESYLNLLQEDELDEGTALSRLGLKRYCCRRMILTHVDLIEKF 60 Query: 278 LSY 286 L Y Sbjct: 61 LRY 63 [84][TOP] >UniRef100_A5E442 DNA-directed RNA polymerases I/II/III subunit 10 n=1 Tax=Lodderomyces elongisporus RepID=A5E442_LODEL Length = 72 Score = 94.4 bits (233), Expect = 4e-18 Identities = 44/63 (69%), Positives = 52/63 (82%), Gaps = 1/63 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDH-NEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 MIIP+RCF+CGKV+G+K + YLE L+ + EGDALDKL LKRYCCRRM+L HVDLIEK Sbjct: 1 MIIPIRCFSCGKVVGDKWETYLEYLQDETMTEGDALDKLKLKRYCCRRMVLTHVDLIEKF 60 Query: 278 LSY 286 L Y Sbjct: 61 LRY 63 [85][TOP] >UniRef100_A4UHB3 DNA-directed RNA polymerase n=1 Tax=Alexandrium fundyense RepID=A4UHB3_ALEFU Length = 82 Score = 94.0 bits (232), Expect = 5e-18 Identities = 39/62 (62%), Positives = 54/62 (87%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RC++CGK+IGNK + YL++L+++ +E + LD LGL RYCCRRMLL HVDLIEK++ Sbjct: 1 MIIPIRCYSCGKLIGNKWERYLQMLQSEMSEKEVLDALGLNRYCCRRMLLTHVDLIEKVM 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [86][TOP] >UniRef100_B4UN44 Similar to uniprot|P22139 Saccharomyces cerevisiae YOR210w RPB10 n=1 Tax=Candida glabrata RepID=B4UN44_CANGA Length = 70 Score = 94.0 bits (232), Expect = 5e-18 Identities = 42/63 (66%), Positives = 53/63 (84%), Gaps = 1/63 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDH-NEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 MI+PVRCF+CGKV+G+K ++YL +L+ D +EG AL +LGLKRYCCRRM+L HVDLIEK Sbjct: 1 MIVPVRCFSCGKVVGDKWESYLNMLQEDELDEGTALSRLGLKRYCCRRMILTHVDLIEKF 60 Query: 278 LSY 286 L Y Sbjct: 61 LRY 63 [87][TOP] >UniRef100_Q75BV8 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=1 Tax=Eremothecium gossypii RepID=RPAB5_ASHGO Length = 70 Score = 93.6 bits (231), Expect = 6e-18 Identities = 42/63 (66%), Positives = 53/63 (84%), Gaps = 1/63 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDH-NEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 MI+PVRCF+CGKV+G+K +AYL +L+ + +EG AL +LGLKRYCCRRM+L HVDLIEK Sbjct: 1 MIVPVRCFSCGKVVGDKWEAYLNMLQEEELDEGTALSRLGLKRYCCRRMILTHVDLIEKF 60 Query: 278 LSY 286 L Y Sbjct: 61 LRY 63 [88][TOP] >UniRef100_C0SH45 DNA-directed RNA polymerases I/II/III subunit 10 n=4 Tax=Onygenales RepID=C0SH45_PARBP Length = 74 Score = 93.2 bits (230), Expect = 8e-18 Identities = 42/62 (67%), Positives = 51/62 (82%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCF+CGKV+G+ + YL+LL +GDA+D+LG KRYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVVGDLWERYLKLLDEGVPDGDAMDQLGCKRYCCRRMLMTHVDLIEKLL 60 Query: 281 SY 286 Y Sbjct: 61 RY 62 [89][TOP] >UniRef100_Q6CRT0 KLLA0D06699p n=1 Tax=Kluyveromyces lactis RepID=Q6CRT0_KLULA Length = 70 Score = 92.8 bits (229), Expect = 1e-17 Identities = 42/63 (66%), Positives = 52/63 (82%), Gaps = 1/63 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDH-NEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 MI+PVRCF+CGKV+G+K +AYL +L+ + EG AL +LGLKRYCCRRM+L HVDLIEK Sbjct: 1 MIVPVRCFSCGKVVGDKWEAYLNMLQEEELEEGTALTRLGLKRYCCRRMILTHVDLIEKF 60 Query: 278 LSY 286 L Y Sbjct: 61 LRY 63 [90][TOP] >UniRef100_C5G068 DNA-directed RNA polymerase N/8 kDa subunit n=1 Tax=Microsporum canis CBS 113480 RepID=C5G068_NANOT Length = 74 Score = 92.8 bits (229), Expect = 1e-17 Identities = 42/62 (67%), Positives = 50/62 (80%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCF+CGKV+G+ + YL LL +GDA+D+LG KRYCCRRML+ HVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVVGDLWERYLRLLDDGVPDGDAMDQLGCKRYCCRRMLMTHVDLIEKLL 60 Query: 281 SY 286 Y Sbjct: 61 RY 62 [91][TOP] >UniRef100_B0YC71 DNA-directed RNA polymerases N/8 kDa subunit superfamily n=2 Tax=Aspergillus fumigatus RepID=B0YC71_ASPFC Length = 140 Score = 92.8 bits (229), Expect = 1e-17 Identities = 41/62 (66%), Positives = 51/62 (82%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCF+CGKV+G+ + YL+LL +GDA+D+LG KRYCCRRM++ HVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVVGDLWERYLQLLDDGIPDGDAMDQLGCKRYCCRRMIMTHVDLIEKLL 60 Query: 281 SY 286 Y Sbjct: 61 RY 62 [92][TOP] >UniRef100_A1CFY2 DNA-directed RNA polymerases N/8 kDa subunit superfamily n=2 Tax=Trichocomaceae RepID=A1CFY2_ASPCL Length = 74 Score = 92.8 bits (229), Expect = 1e-17 Identities = 41/62 (66%), Positives = 51/62 (82%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCF+CGKV+G+ + YL+LL +GDA+D+LG KRYCCRRM++ HVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVVGDLWERYLQLLDEGIPDGDAMDQLGCKRYCCRRMIMTHVDLIEKLL 60 Query: 281 SY 286 Y Sbjct: 61 RY 62 [93][TOP] >UniRef100_A0D0A0 Chromosome undetermined scaffold_33, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0D0A0_PARTE Length = 68 Score = 92.4 bits (228), Expect = 1e-17 Identities = 40/62 (64%), Positives = 52/62 (83%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGKV+G+ Y++LL+ G+ALD+LGL+RYCCRRM+L HVDLI+KLL Sbjct: 1 MIIPIRCFTCGKVVGHLWSDYVQLLQDGVTTGEALDRLGLERYCCRRMILTHVDLIDKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [94][TOP] >UniRef100_Q7SG15 DNA-directed RNA polymerases I/II/III subunit 10 n=1 Tax=Neurospora crassa RepID=Q7SG15_NEUCR Length = 84 Score = 92.4 bits (228), Expect = 1e-17 Identities = 41/63 (65%), Positives = 53/63 (84%), Gaps = 1/63 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDH-NEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 MIIP+RCF+CGKV+G+ + YL+L+ + +GDALD+LGLKRYCCRRM++ HVDLIEKL Sbjct: 1 MIIPIRCFSCGKVVGDLWERYLQLIDGEEITDGDALDQLGLKRYCCRRMVMTHVDLIEKL 60 Query: 278 LSY 286 L Y Sbjct: 61 LKY 63 [95][TOP] >UniRef100_C9SH58 DNA-directed RNA polymerases I/II/III subunit 10 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SH58_9PEZI Length = 76 Score = 92.4 bits (228), Expect = 1e-17 Identities = 41/62 (66%), Positives = 51/62 (82%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCF+CGKV G+ + YL+L+ +GDA+D+LGLKRYCCRRM++ HVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVTGDLWERYLKLIDDGIADGDAMDELGLKRYCCRRMIMTHVDLIEKLL 60 Query: 281 SY 286 Y Sbjct: 61 KY 62 [96][TOP] >UniRef100_C8VH91 DNA-directed RNA polymerases N/8 kDa subunit superfamily (AFU_orthologue; AFUA_7G02620) n=1 Tax=Aspergillus nidulans FGSC A4 RepID=C8VH91_EMENI Length = 74 Score = 92.4 bits (228), Expect = 1e-17 Identities = 41/62 (66%), Positives = 51/62 (82%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCF+CGKV+G+ + YL+LL +GDA+D+LG KRYCCRRM++ HVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVVGDLWERYLQLLDDGIPDGDAMDQLGCKRYCCRRMVMTHVDLIEKLL 60 Query: 281 SY 286 Y Sbjct: 61 RY 62 [97][TOP] >UniRef100_B8MTW2 DNA-directed RNA polymerases N/8 kDa subunit superfamily n=1 Tax=Talaromyces stipitatus ATCC 10500 RepID=B8MTW2_TALSN Length = 74 Score = 92.4 bits (228), Expect = 1e-17 Identities = 41/62 (66%), Positives = 51/62 (82%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCF+CGKV+G+ + YL+LL +GDA+D+LG KRYCCRRM++ HVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVVGDLWERYLQLLDDGVPDGDAMDQLGCKRYCCRRMVMTHVDLIEKLL 60 Query: 281 SY 286 Y Sbjct: 61 RY 62 [98][TOP] >UniRef100_B6QUX0 DNA-directed RNA polymerases N/8 kDa subunit superfamily n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QUX0_PENMQ Length = 74 Score = 92.4 bits (228), Expect = 1e-17 Identities = 41/62 (66%), Positives = 51/62 (82%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCF+CGKV+G+ + YL+LL +GDA+D+LG KRYCCRRM++ HVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVVGDLWERYLQLLDEGVPDGDAMDQLGCKRYCCRRMVMTHVDLIEKLL 60 Query: 281 SY 286 Y Sbjct: 61 RY 62 [99][TOP] >UniRef100_B6HKG6 Pc21g11480 protein n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6HKG6_PENCW Length = 74 Score = 91.7 bits (226), Expect = 2e-17 Identities = 40/62 (64%), Positives = 51/62 (82%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCF+CGKV+G+ + YL+LL +GDA+D+LG +RYCCRRM++ HVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVVGDLWERYLQLLDDGVPDGDAMDQLGCRRYCCRRMIMTHVDLIEKLL 60 Query: 281 SY 286 Y Sbjct: 61 RY 62 [100][TOP] >UniRef100_B2WEA7 DNA-directed RNA polymerases N/8 kDa subunit superfamily n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2WEA7_PYRTR Length = 77 Score = 91.7 bits (226), Expect = 2e-17 Identities = 42/75 (56%), Positives = 51/75 (68%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MI+P+RCF+CGKV G+ + Y+ LL E DALD +GL+RYCCRRM+L HVDLIEKLL Sbjct: 1 MIVPIRCFSCGKVTGDLWEKYMNLLSDGAEEADALDAVGLQRYCCRRMILTHVDLIEKLL 60 Query: 281 SYK*SSGAMPRGLAG 325 Y S R G Sbjct: 61 KYNASEREQARAARG 75 [101][TOP] >UniRef100_A7TKR3 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TKR3_VANPO Length = 70 Score = 91.7 bits (226), Expect = 2e-17 Identities = 41/63 (65%), Positives = 52/63 (82%), Gaps = 1/63 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDH-NEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 MI+PVRCF+CGKV+G+K ++YL +L+ D +EG AL +LGL RYCCRRM+L HVDLIEK Sbjct: 1 MIVPVRCFSCGKVVGDKWESYLNMLQEDELDEGTALSRLGLTRYCCRRMILTHVDLIEKF 60 Query: 278 LSY 286 L Y Sbjct: 61 LRY 63 [102][TOP] >UniRef100_A0DC00 Chromosome undetermined scaffold_45, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0DC00_PARTE Length = 68 Score = 91.3 bits (225), Expect = 3e-17 Identities = 39/62 (62%), Positives = 52/62 (83%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGKV+G+ Y++LL+ G++LD+LGL+RYCCRRM+L HVDLI+KLL Sbjct: 1 MIIPIRCFTCGKVVGHLWSDYVQLLQDGVTTGESLDRLGLERYCCRRMILTHVDLIDKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [103][TOP] >UniRef100_UPI000187D34F hypothetical protein MPER_07033 n=1 Tax=Moniliophthora perniciosa FA553 RepID=UPI000187D34F Length = 70 Score = 90.5 bits (223), Expect = 5e-17 Identities = 42/57 (73%), Positives = 47/57 (82%) Frame = +2 Query: 116 RCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLLSY 286 RCFTCGKVIG+K YL+LL D EGDALD+L L+RYCCRRM+L HVDLIEKLL Y Sbjct: 1 RCFTCGKVIGDKWNTYLDLLAKDIAEGDALDELQLRRYCCRRMVLTHVDLIEKLLHY 57 [104][TOP] >UniRef100_A8PYD2 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PYD2_MALGO Length = 83 Score = 90.5 bits (223), Expect = 5e-17 Identities = 43/62 (69%), Positives = 49/62 (79%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCF+CGKVIG+K AYL LL EG+AL +L L RYCCRRM+L HVDLIE+LL Sbjct: 1 MIIPVRCFSCGKVIGDKWDAYLALLIEGRTEGEALTELQLHRYCCRRMVLTHVDLIERLL 60 Query: 281 SY 286 Y Sbjct: 61 HY 62 [105][TOP] >UniRef100_A6RMH2 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6RMH2_BOTFB Length = 76 Score = 90.5 bits (223), Expect = 5e-17 Identities = 40/62 (64%), Positives = 51/62 (82%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCF+CGKV G+ + Y++L+ N+GDA+D+L LKRYCCRRM++ HVDLIEKLL Sbjct: 1 MIIPVRCFSCGKVTGDIWERYVKLIDEGVNDGDAMDELTLKRYCCRRMIMTHVDLIEKLL 60 Query: 281 SY 286 Y Sbjct: 61 RY 62 [106][TOP] >UniRef100_Q3LWJ6 RNA polymerase II subunit RPB10 n=1 Tax=Bigelowiella natans RepID=Q3LWJ6_BIGNA Length = 65 Score = 89.7 bits (221), Expect = 9e-17 Identities = 39/62 (62%), Positives = 50/62 (80%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 M+IP+RCF+CGKVI YLEL+K +EG++LD L + RYCCRRMLL+HVD+IEKLL Sbjct: 1 MLIPIRCFSCGKVIAGSWLEYLELIKIGFSEGESLDALRMNRYCCRRMLLSHVDIIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [107][TOP] >UniRef100_B6KU00 DNA-directed RNA polymerase II, 8.2 kDa polypeptide, putative n=3 Tax=Toxoplasma gondii RepID=B6KU00_TOXGO Length = 72 Score = 89.7 bits (221), Expect = 9e-17 Identities = 39/62 (62%), Positives = 50/62 (80%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGKVI + + +++++ D EG+ALD LGL RYCCRRMLL H DLI+KLL Sbjct: 1 MIIPIRCFTCGKVIAHLWEKWIDMIDEDRPEGEALDILGLDRYCCRRMLLTHADLIDKLL 60 Query: 281 SY 286 +Y Sbjct: 61 AY 62 [108][TOP] >UniRef100_A4RLD2 DNA-directed RNA polymerase II chain RPB10, putative n=1 Tax=Magnaporthe grisea RepID=A4RLD2_MAGGR Length = 78 Score = 89.7 bits (221), Expect = 9e-17 Identities = 38/62 (61%), Positives = 50/62 (80%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCF+CGKV G+ + +L L+ + ++GDA+D LG KRYCCRRM++ HVDLIEKLL Sbjct: 1 MIIPIRCFSCGKVTGDLWERFLNLIDSGMSDGDAMDALGCKRYCCRRMIMTHVDLIEKLL 60 Query: 281 SY 286 Y Sbjct: 61 KY 62 [109][TOP] >UniRef100_UPI00017F02E3 PREDICTED: similar to DNA directed RNA polymerase II polypeptide L n=1 Tax=Sus scrofa RepID=UPI00017F02E3 Length = 67 Score = 89.0 bits (219), Expect = 2e-16 Identities = 40/62 (64%), Positives = 49/62 (79%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 M IPV CF CGK++ N +AYL LL+ + E DALD LGLK+YCCR MLLA++DLIEKLL Sbjct: 1 MTIPVHCFMCGKIVSNTWEAYLGLLQAKYTEEDALDALGLKQYCCRHMLLAYMDLIEKLL 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [110][TOP] >UniRef100_Q2HDK3 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2HDK3_CHAGB Length = 82 Score = 88.2 bits (217), Expect = 3e-16 Identities = 39/63 (61%), Positives = 53/63 (84%), Gaps = 1/63 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDH-NEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 MIIP+RCF+CGKV G+ + +++L++ D ++GDALD+LG KRYCCRRM++ HVDLIEKL Sbjct: 1 MIIPIRCFSCGKVTGDLWEKFVKLIEEDGLSDGDALDQLGCKRYCCRRMVMTHVDLIEKL 60 Query: 278 LSY 286 L Y Sbjct: 61 LKY 63 [111][TOP] >UniRef100_A4HE74 DNA-directed RNA polymerase ii n=1 Tax=Leishmania braziliensis RepID=A4HE74_LEIBR Length = 84 Score = 87.8 bits (216), Expect = 3e-16 Identities = 37/62 (59%), Positives = 49/62 (79%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRC++CGKV+GN ++ Y LL D+ E +ALD L L RYCCRRM+L+H+DLI+ L+ Sbjct: 1 MIIPVRCYSCGKVVGNLYEQYQRLLDQDYTESEALDALHLDRYCCRRMILSHIDLIDDLI 60 Query: 281 SY 286 Y Sbjct: 61 PY 62 [112][TOP] >UniRef100_Q8SRS6 DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=1 Tax=Encephalitozoon cuniculi RepID=RPAB5_ENCCU Length = 72 Score = 87.8 bits (216), Expect = 3e-16 Identities = 37/62 (59%), Positives = 49/62 (79%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGK I +K + Y ELLK D + +ALD+LG++R CCRRM L HVD+++KLL Sbjct: 1 MIIPIRCFTCGKEISSKWEPYQELLKIDKGKAEALDELGMRRICCRRMFLGHVDIVDKLL 60 Query: 281 SY 286 + Sbjct: 61 KF 62 [113][TOP] >UniRef100_B8BNG5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=B8BNG5_ORYSI Length = 114 Score = 86.7 bits (213), Expect = 7e-16 Identities = 49/104 (47%), Positives = 54/104 (51%), Gaps = 42/104 (40%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEG---------------------------- 196 MIIPVRCFTCGKVIGNK YL+LL+ D+ EG Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGGSGRQRGEERYWGLMAATEMVCYGGGGR 60 Query: 197 --------------DALDKLGLKRYCCRRMLLAHVDLIEKLLSY 286 DALD LGL RYCCRRML+ HVDLIEKLL+Y Sbjct: 61 RLADGDADLSVHMWDALDALGLVRYCCRRMLMTHVDLIEKLLNY 104 [114][TOP] >UniRef100_Q4CTY7 DNA-directed RNA polymerase subunit, putative n=1 Tax=Trypanosoma cruzi RepID=Q4CTY7_TRYCR Length = 84 Score = 84.7 bits (208), Expect = 3e-15 Identities = 35/62 (56%), Positives = 50/62 (80%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 M+IPVRC++CGKVIGN ++ Y +LL D+ E +AL+ L L R CCRRM+L+H+DL+++LL Sbjct: 1 MLIPVRCYSCGKVIGNLYEKYQQLLSEDYTEAEALNALQLDRMCCRRMILSHIDLVDELL 60 Query: 281 SY 286 Y Sbjct: 61 PY 62 [115][TOP] >UniRef100_C6LT42 DNA-directed RNA polymerase RPB10 n=1 Tax=Giardia intestinalis ATCC 50581 RepID=C6LT42_GIALA Length = 84 Score = 84.7 bits (208), Expect = 3e-15 Identities = 43/71 (60%), Positives = 50/71 (70%), Gaps = 9/71 (12%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGD---------ALDKLGLKRYCCRRMLLA 253 MIIPVRCFTCGKV+G+ ++ YL+LL E D ALD+LGL RYCCRRMLL Sbjct: 1 MIIPVRCFTCGKVVGSLYEKYLKLLGEYEAEADGSLETPAKRALDELGLTRYCCRRMLLT 60 Query: 254 HVDLIEKLLSY 286 HVDLI+ LL Y Sbjct: 61 HVDLIDDLLLY 71 [116][TOP] >UniRef100_Q4D7L7 DNA-directed RNA polymerase subunit, putative n=1 Tax=Trypanosoma cruzi RepID=Q4D7L7_TRYCR Length = 84 Score = 84.3 bits (207), Expect = 4e-15 Identities = 35/62 (56%), Positives = 49/62 (79%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 M+IPVRC++CGKVIGN ++ Y +LL D+ E +AL+ L L R CCRRM+L+H+DL++ LL Sbjct: 1 MLIPVRCYSCGKVIGNLYETYQQLLSEDYTEAEALNALQLDRMCCRRMILSHIDLVDDLL 60 Query: 281 SY 286 Y Sbjct: 61 PY 62 [117][TOP] >UniRef100_C9ZJZ7 DNA-directed RNA polymerase subunit, putative n=2 Tax=Trypanosoma brucei RepID=C9ZJZ7_TRYBG Length = 84 Score = 84.3 bits (207), Expect = 4e-15 Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 1/86 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 M+IPVRC++CGKV+G+ ++ Y ELL DH E +AL+ L L R CCRRM+L+H+DL + LL Sbjct: 1 MLIPVRCYSCGKVVGHLYELYQELLNQDHTEAEALNALRLSRMCCRRMILSHIDLADDLL 60 Query: 281 SYK*S-SGAMPRGLAGPWDGRRRRLQ 355 Y G+MP L P G R Q Sbjct: 61 PYSVPVVGSMP--LINPVQGPVPRRQ 84 [118][TOP] >UniRef100_Q2L364 RNA polymerase I subunit 1RPB10 n=1 Tax=Trypanosoma brucei brucei RepID=Q2L364_TRYBB Length = 84 Score = 84.0 bits (206), Expect = 5e-15 Identities = 35/62 (56%), Positives = 48/62 (77%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 M+IPVRC++CGKV+G+ ++ Y ELL DH E +AL+ L L R CCRRM+L+H+DL + LL Sbjct: 1 MLIPVRCYSCGKVVGHLYELYQELLNQDHTEAEALNALRLSRMCCRRMILSHIDLADDLL 60 Query: 281 SY 286 Y Sbjct: 61 PY 62 [119][TOP] >UniRef100_B2AA22 Predicted CDS Pa_1_2560 n=1 Tax=Podospora anserina RepID=B2AA22_PODAN Length = 82 Score = 83.2 bits (204), Expect = 8e-15 Identities = 38/63 (60%), Positives = 51/63 (80%), Gaps = 1/63 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDH-NEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 MIIPVRCF+CGKV+G+ + ++ L++ +G+ALD+LG KRYCCRRM++ HVDLIEKL Sbjct: 1 MIIPVRCFSCGKVVGDLWEKFVVLIEDRGLADGEALDELGCKRYCCRRMVMTHVDLIEKL 60 Query: 278 LSY 286 L Y Sbjct: 61 LKY 63 [120][TOP] >UniRef100_A2DSN4 Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis G3 RepID=A2DSN4_TRIVA Length = 73 Score = 82.8 bits (203), Expect = 1e-14 Identities = 36/63 (57%), Positives = 51/63 (80%), Gaps = 1/63 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDH-NEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 M+IPVRCFTCG +IG+K + Y+ L++ +H N +AL+ L LKR+CCRRMLL HVDL++++ Sbjct: 1 MLIPVRCFTCGAIIGHKWKEYVRLIEEEHMNYTEALNALNLKRFCCRRMLLTHVDLLDRM 60 Query: 278 LSY 286 L Y Sbjct: 61 LLY 63 [121][TOP] >UniRef100_B5IVP8 RNA polymerases N / 8 kDa subunit superfamily n=1 Tax=Thermococcus barophilus MP RepID=B5IVP8_9EURY Length = 65 Score = 82.8 bits (203), Expect = 1e-14 Identities = 35/63 (55%), Positives = 48/63 (76%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MI+PVRCFTCGKVIG+K+ + E ++ + LD LGL+RYCCRRMLL HV+LI+ ++ Sbjct: 1 MIVPVRCFTCGKVIGDKYYIFKERVENGEDPEKVLDDLGLERYCCRRMLLTHVELIDDIM 60 Query: 281 SYK 289 Y+ Sbjct: 61 QYR 63 [122][TOP] >UniRef100_O59298 DNA-directed RNA polymerase subunit N n=1 Tax=Pyrococcus horikoshii RepID=RPON_PYRHO Length = 65 Score = 82.4 bits (202), Expect = 1e-14 Identities = 36/63 (57%), Positives = 48/63 (76%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGKVIG+K+ + ++ + LD LGL+RYCCRRMLL+HV+LI+ ++ Sbjct: 1 MIIPVRCFTCGKVIGDKYYEFKRRVEAGEDPEKVLDDLGLERYCCRRMLLSHVELIDDIM 60 Query: 281 SYK 289 YK Sbjct: 61 HYK 63 [123][TOP] >UniRef100_Q8TVB4 DNA-directed RNA polymerase subunit N n=1 Tax=Methanopyrus kandleri RepID=RPON_METKA Length = 72 Score = 82.4 bits (202), Expect = 1e-14 Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 1/72 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNE-GDALDKLGLKRYCCRRMLLAHVDLIEKL 277 MIIP+RCFTCG+ I + + Y+EL++ + E G+ALD+LG+ RYCCRRM L+HVDL+E+ Sbjct: 1 MIIPIRCFTCGRPIAHLWEKYVELIEEEGMEPGEALDELGVDRYCCRRMFLSHVDLLEES 60 Query: 278 LSYK*SSGAMPR 313 L Y MPR Sbjct: 61 LPYTPPRLGMPR 72 [124][TOP] >UniRef100_Q980Z8 DNA-directed RNA polymerase subunit N n=2 Tax=Sulfolobus solfataricus RepID=RPON_SULSO Length = 66 Score = 82.0 bits (201), Expect = 2e-14 Identities = 33/62 (53%), Positives = 47/62 (75%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 M+IP+RCFTCG +I +K Q+++ + N G LD LG+KRYCCRRMLL+HVD+I +++ Sbjct: 1 MLIPIRCFTCGSLIADKWQSFITRVNAGENPGKVLDDLGVKRYCCRRMLLSHVDIINEVI 60 Query: 281 SY 286 Y Sbjct: 61 HY 62 [125][TOP] >UniRef100_Q8MUU5 RNA polymerase II subunit Rpb10 n=1 Tax=Giardia intestinalis RepID=Q8MUU5_GIALA Length = 84 Score = 81.6 bits (200), Expect = 2e-14 Identities = 42/71 (59%), Positives = 50/71 (70%), Gaps = 9/71 (12%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELL---------KTDHNEGDALDKLGLKRYCCRRMLLA 253 MIIPVRCFTCGKVIG+ ++ YL+LL ++ ALD+LGL RYCCRRMLL Sbjct: 1 MIIPVRCFTCGKVIGSLYEKYLKLLGEYGAEESGSSETPAKRALDELGLTRYCCRRMLLT 60 Query: 254 HVDLIEKLLSY 286 HVDLI+ LL Y Sbjct: 61 HVDLIDDLLLY 71 [126][TOP] >UniRef100_A8BAL6 DNA-directed RNA polymerase RPB10 n=1 Tax=Giardia lamblia ATCC 50803 RepID=A8BAL6_GIALA Length = 122 Score = 81.6 bits (200), Expect = 2e-14 Identities = 42/71 (59%), Positives = 50/71 (70%), Gaps = 9/71 (12%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELL---------KTDHNEGDALDKLGLKRYCCRRMLLA 253 MIIPVRCFTCGKVIG+ ++ YL+LL ++ ALD+LGL RYCCRRMLL Sbjct: 39 MIIPVRCFTCGKVIGSLYEKYLKLLGEYGAEESGSSETPAKRALDELGLTRYCCRRMLLT 98 Query: 254 HVDLIEKLLSY 286 HVDLI+ LL Y Sbjct: 99 HVDLIDDLLLY 109 [127][TOP] >UniRef100_B3KZ26 DNA-directed RNA polymerase 2, 8.2 kDa polypeptide, putative n=2 Tax=Plasmodium (Plasmodium) RepID=B3KZ26_PLAKH Length = 69 Score = 81.6 bits (200), Expect = 2e-14 Identities = 37/62 (59%), Positives = 47/62 (75%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGK+IGN Y + L+ ++ DALD+L L RYCCRRM+L H D+++KLL Sbjct: 1 MIIPVRCFTCGKLIGNLWSLYEKKLEEGVSKCDALDELNLTRYCCRRMILTHADMMDKLL 60 Query: 281 SY 286 Y Sbjct: 61 CY 62 [128][TOP] >UniRef100_Q96YW4 DNA-directed RNA polymerase subunit N n=1 Tax=Sulfolobus tokodaii RepID=RPON_SULTO Length = 66 Score = 81.6 bits (200), Expect = 2e-14 Identities = 33/62 (53%), Positives = 48/62 (77%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCG +IG+K + ++ + + G LD LG+KRYCCRRMLL+HVD+I++++ Sbjct: 1 MIIPIRCFTCGSLIGDKWEPFITRVSNGEDPGKVLDDLGVKRYCCRRMLLSHVDIIKEVI 60 Query: 281 SY 286 Y Sbjct: 61 HY 62 [129][TOP] >UniRef100_Q4XQK0 DNA-directed RNA polymerase 2 8.2 kDa polypeptide, putative n=3 Tax=Plasmodium (Vinckeia) RepID=Q4XQK0_PLACH Length = 69 Score = 81.3 bits (199), Expect = 3e-14 Identities = 37/62 (59%), Positives = 46/62 (74%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGK+IGN Y + L ++ DALD+L L RYCCRRM+L H D+++KLL Sbjct: 1 MIIPVRCFTCGKLIGNLWSLYEKKLDEGISKCDALDELNLSRYCCRRMMLTHADMMDKLL 60 Query: 281 SY 286 Y Sbjct: 61 CY 62 [130][TOP] >UniRef100_C6A1B7 DNA-directed RNA polymerase subunit N n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A1B7_THESM Length = 68 Score = 80.9 bits (198), Expect = 4e-14 Identities = 33/64 (51%), Positives = 50/64 (78%) Frame = +2 Query: 98 NMIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 ++I+PVRCFTCGKVIG+K+ + E ++ + LD LGL+RYCCRRM L+HV+LI+++ Sbjct: 3 HLIVPVRCFTCGKVIGDKYYIFKERVEKGEDPEKVLDDLGLERYCCRRMFLSHVELIDEI 62 Query: 278 LSYK 289 + Y+ Sbjct: 63 MHYR 66 [131][TOP] >UniRef100_P60291 DNA-directed RNA polymerase subunit N n=2 Tax=Pyrococcus RepID=RPON_PYRAB Length = 65 Score = 80.9 bits (198), Expect = 4e-14 Identities = 34/63 (53%), Positives = 48/63 (76%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MI+PVRCFTCGKVIG+K+ + ++ + LD LGL+RYCCRRMLL+HV+LI+ ++ Sbjct: 1 MIVPVRCFTCGKVIGDKYYEFKRRVEAGEDPEKVLDDLGLERYCCRRMLLSHVELIDDIM 60 Query: 281 SYK 289 Y+ Sbjct: 61 HYR 63 [132][TOP] >UniRef100_C3N058 DNA-directed RNA polymerase subunit N n=7 Tax=Sulfolobus RepID=RPON_SULIA Length = 66 Score = 80.5 bits (197), Expect = 5e-14 Identities = 32/62 (51%), Positives = 46/62 (74%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 M+IP+RCFTCG +I +K Q ++ + N G LD LG+KRYCCRRMLL+H+D+I +++ Sbjct: 1 MMIPIRCFTCGSLIADKWQPFITRVNAGENPGKVLDDLGVKRYCCRRMLLSHIDIISEVI 60 Query: 281 SY 286 Y Sbjct: 61 HY 62 [133][TOP] >UniRef100_Q8IC08 DNA-directed RNA polymerase 2 8.2 kDa polypeptide, putative n=1 Tax=Plasmodium falciparum 3D7 RepID=Q8IC08_PLAF7 Length = 69 Score = 79.7 bits (195), Expect = 9e-14 Identities = 36/62 (58%), Positives = 47/62 (75%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGK+IGN Y + L+ ++ DAL++L L RYCCRRM+L H D+++KLL Sbjct: 1 MIIPVRCFTCGKLIGNLWSVYEKKLEEGLSKCDALNELNLYRYCCRRMILTHADMMDKLL 60 Query: 281 SY 286 Y Sbjct: 61 CY 62 [134][TOP] >UniRef100_Q4YSS8 Putative uncharacterized protein n=1 Tax=Plasmodium berghei RepID=Q4YSS8_PLABE Length = 68 Score = 79.3 bits (194), Expect = 1e-13 Identities = 38/62 (61%), Positives = 46/62 (74%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGK+IGN Y E L ++ DALD+L L RYCCRRM+L H D+++KLL Sbjct: 1 MIIPVRCFTCGKLIGNLWSLY-EKLDEGISKCDALDELNLSRYCCRRMMLTHADMMDKLL 59 Query: 281 SY 286 Y Sbjct: 60 CY 61 [135][TOP] >UniRef100_C4VBT4 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4VBT4_NOSCE Length = 74 Score = 79.3 bits (194), Expect = 1e-13 Identities = 34/62 (54%), Positives = 46/62 (74%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 M+IPVRCFTC K I +K + Y L+ TD + DAL++L +KR CCRRM L HV++I+KL+ Sbjct: 1 MLIPVRCFTCNKEISSKWEPYKYLINTDKSPADALNELDIKRICCRRMFLGHVEIIDKLI 60 Query: 281 SY 286 Y Sbjct: 61 KY 62 [136][TOP] >UniRef100_B7XIS4 DNA-directed RNA polymerases I, II, and III, subunit 10 n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XIS4_ENTBH Length = 74 Score = 79.3 bits (194), Expect = 1e-13 Identities = 36/63 (57%), Positives = 47/63 (74%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCF+C K I +K++ YLELL + DALD+LGL R CCRRM L HVD+ ++LL Sbjct: 6 MIIPVRCFSCNKEISSKYEKYLELLSRGVSPADALDQLGLTRICCRRMYLGHVDIGDQLL 65 Query: 281 SYK 289 ++ Sbjct: 66 QFE 68 [137][TOP] >UniRef100_UPI000150A5EB RNA polymerases N / 8 kDa subunit family protein n=1 Tax=Tetrahymena thermophila RepID=UPI000150A5EB Length = 73 Score = 79.0 bits (193), Expect = 2e-13 Identities = 38/66 (57%), Positives = 52/66 (78%), Gaps = 4/66 (6%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELL-KTDHNEGD---ALDKLGLKRYCCRRMLLAHVDLI 268 MIIPVRCFTCGKV+G+ +L+++ +++ N+ D ALD+L L RYCCRRM+L H DLI Sbjct: 1 MIIPVRCFTCGKVVGHMWNDFLQMISESNPNKKDMKSALDELRLNRYCCRRMILTHCDLI 60 Query: 269 EKLLSY 286 +KLL+Y Sbjct: 61 DKLLNY 66 [138][TOP] >UniRef100_C5A245 DNA-directed RNA polymerase subunit N (RpoN) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A245_THEGJ Length = 70 Score = 79.0 bits (193), Expect = 2e-13 Identities = 32/63 (50%), Positives = 49/63 (77%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MI+PVRCFTCGKV+ +K+ + + ++ + G LD LG++RYCCRR LL+HV+LI++++ Sbjct: 6 MIVPVRCFTCGKVLADKYYEFRKRVEAGEDPGKVLDDLGVERYCCRRTLLSHVELIDQVM 65 Query: 281 SYK 289 YK Sbjct: 66 VYK 68 [139][TOP] >UniRef100_Q5JJC9 DNA-directed RNA polymerase subunit N n=2 Tax=Thermococcus RepID=RPON_PYRKO Length = 65 Score = 79.0 bits (193), Expect = 2e-13 Identities = 32/63 (50%), Positives = 49/63 (77%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MI+PVRCFTCGKV+ +K+ + + ++ + G LD LG++RYCCRR LL+HV+LI++++ Sbjct: 1 MIVPVRCFTCGKVLADKYYEFKKRVEAGEDPGKVLDDLGVERYCCRRTLLSHVELIDQVM 60 Query: 281 SYK 289 YK Sbjct: 61 VYK 63 [140][TOP] >UniRef100_B6YSQ7 DNA-directed RNA polymerase subunit N n=1 Tax=Thermococcus onnurineus NA1 RepID=RPON_THEON Length = 65 Score = 77.8 bits (190), Expect = 3e-13 Identities = 33/63 (52%), Positives = 48/63 (76%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MI+PVRCFTCGKVIG+K+ + ++ + LD LG++RYCCRR LL+HV+LI++++ Sbjct: 1 MIVPVRCFTCGKVIGDKYYEFKARVEKGEDPEKVLDDLGVERYCCRRTLLSHVELIDQVM 60 Query: 281 SYK 289 YK Sbjct: 61 VYK 63 [141][TOP] >UniRef100_Q4QG42 DNA-directed RNA polymerase ii 8.2 Kd polypeptide, putative n=1 Tax=Leishmania major RepID=Q4QG42_LEIMA Length = 89 Score = 76.3 bits (186), Expect = 1e-12 Identities = 33/62 (53%), Positives = 46/62 (74%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCG VI +K+ YL+L+ +E DA++ L+R+CCRRM+L HVD+ + LL Sbjct: 1 MIIPVRCFTCGNVIADKYLLYLDLVSQGVSEEDAMNAFHLERFCCRRMMLTHVDMTDLLL 60 Query: 281 SY 286 + Sbjct: 61 KF 62 [142][TOP] >UniRef100_A4H798 DNA-directed RNA polymerase ii 8.2 Kd polypeptide, putative n=1 Tax=Leishmania braziliensis RepID=A4H798_LEIBR Length = 89 Score = 76.3 bits (186), Expect = 1e-12 Identities = 33/62 (53%), Positives = 46/62 (74%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCG VI +K+ YL+L+ +E DA++ L+R+CCRRM+L HVD+ + LL Sbjct: 1 MIIPVRCFTCGNVIADKYLLYLDLVSQGVSEEDAMNAFHLERFCCRRMMLTHVDMTDLLL 60 Query: 281 SY 286 + Sbjct: 61 KF 62 [143][TOP] >UniRef100_A4HVP0 DNA-directed RNA polymerase ii 8.2 Kd polypeptide, putative n=1 Tax=Leishmania infantum RepID=A4HVP0_LEIIN Length = 89 Score = 75.9 bits (185), Expect = 1e-12 Identities = 33/62 (53%), Positives = 46/62 (74%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCG VI +K+ YL+L+ +E DA++ L+R+CCRRM+L HVD+ + LL Sbjct: 1 MIIPVRCFTCGNVIADKYLLYLDLVSQGVSEEDAMNVFHLERFCCRRMMLTHVDMTDLLL 60 Query: 281 SY 286 + Sbjct: 61 KF 62 [144][TOP] >UniRef100_Q1XEE4 DNA-directed RNA polymerase subunit 2RPB10 n=1 Tax=Trypanosoma brucei brucei RepID=Q1XEE4_TRYBB Length = 71 Score = 75.1 bits (183), Expect = 2e-12 Identities = 35/62 (56%), Positives = 42/62 (67%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCG VI +K+ YL+L+ +E ALD L R+CCRRM L HVD + LL Sbjct: 1 MIIPVRCFTCGNVIADKYLLYLDLVAEGSSEEAALDAFNLWRFCCRRMFLTHVDFSDLLL 60 Query: 281 SY 286 Y Sbjct: 61 KY 62 [145][TOP] >UniRef100_Q4DLU2 DNA-directed RNA polymerase ii 8.2 Kd polypeptide, putative n=1 Tax=Trypanosoma cruzi RepID=Q4DLU2_TRYCR Length = 77 Score = 74.3 bits (181), Expect = 4e-12 Identities = 34/62 (54%), Positives = 43/62 (69%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCG VI +K+ YL+L+ +E ALD L+R+CCRRM L HVD + LL Sbjct: 1 MIIPVRCFTCGNVIADKYLLYLDLVAEGVSEEAALDAFNLQRFCCRRMFLTHVDFSDLLL 60 Query: 281 SY 286 + Sbjct: 61 KF 62 [146][TOP] >UniRef100_Q4CMX3 DNA-directed RNA polymerase subunit, putative n=1 Tax=Trypanosoma cruzi RepID=Q4CMX3_TRYCR Length = 77 Score = 74.3 bits (181), Expect = 4e-12 Identities = 34/62 (54%), Positives = 43/62 (69%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCG VI +K+ YL+L+ +E ALD L+R+CCRRM L HVD + LL Sbjct: 1 MIIPVRCFTCGNVIADKYLLYLDLVAEGVSEEAALDAFNLQRFCCRRMFLTHVDFSDLLL 60 Query: 281 SY 286 + Sbjct: 61 KF 62 [147][TOP] >UniRef100_A3MXZ9 DNA-directed RNA polymerase subunit N n=1 Tax=Pyrobaculum calidifontis JCM 11548 RepID=RPON_PYRCJ Length = 66 Score = 72.8 bits (177), Expect = 1e-11 Identities = 32/63 (50%), Positives = 45/63 (71%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGK +G+ + + + + + G LD+LG+ RYCCRR L+AHV+ I+ LL Sbjct: 1 MIIPVRCFTCGKPLGHLYAVFKKRVLAGEHPGRVLDELGVVRYCCRRTLMAHVEWIDDLL 60 Query: 281 SYK 289 Y+ Sbjct: 61 VYE 63 [148][TOP] >UniRef100_A4WNA8 DNA-directed RNA polymerase subunit N n=1 Tax=Pyrobaculum arsenaticum DSM 13514 RepID=RPON_PYRAR Length = 65 Score = 72.8 bits (177), Expect = 1e-11 Identities = 32/63 (50%), Positives = 44/63 (69%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCGK +G+ + + + + + G LD LGL RYCCRR L+AHV+ I+ +L Sbjct: 1 MIIPVRCFTCGKPLGHLYAVFKQRVLAGEHPGKVLDDLGLVRYCCRRTLMAHVEWIDDVL 60 Query: 281 SYK 289 Y+ Sbjct: 61 IYE 63 [149][TOP] >UniRef100_C4M5M4 DNA-directed RNA polymerase subunit N, putative n=1 Tax=Entamoeba histolytica HM-1:IMSS RepID=C4M5M4_ENTHI Length = 73 Score = 72.4 bits (176), Expect = 1e-11 Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 1/63 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGD-ALDKLGLKRYCCRRMLLAHVDLIEKL 277 MIIPVRCFTCGKVIGNK + +LEL D +LG++RYCC+RML++HV+LI L Sbjct: 1 MIIPVRCFTCGKVIGNKWEKFLELATGGKVPMDQVFSELGIERYCCKRMLVSHVNLIGFL 60 Query: 278 LSY 286 Y Sbjct: 61 SMY 63 [150][TOP] >UniRef100_A0B6E7 DNA-directed RNA polymerase subunit N n=1 Tax=Methanosaeta thermophila PT RepID=RPON_METTP Length = 61 Score = 72.4 bits (176), Expect = 1e-11 Identities = 32/62 (51%), Positives = 47/62 (75%) Frame = +2 Query: 104 IIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLLS 283 +IPVRCF+CGKVI + + Y E +K++ G +D LG++RYCCRRMLL+HV+++E L Sbjct: 1 MIPVRCFSCGKVISSVWEEYRERIKSEP-PGKVMDDLGIERYCCRRMLLSHVEVVEMLRR 59 Query: 284 YK 289 Y+ Sbjct: 60 YQ 61 [151][TOP] >UniRef100_A4YIM8 DNA-directed RNA polymerase subunit N n=1 Tax=Metallosphaera sedula DSM 5348 RepID=RPON_METS5 Length = 66 Score = 72.0 bits (175), Expect = 2e-11 Identities = 31/62 (50%), Positives = 43/62 (69%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCG +I +K A+ ++ + G LD L +KR CCRR LL HVD+I +++ Sbjct: 1 MIIPVRCFTCGSLIADKWDAFSTRVRAGEDPGKVLDDLNVKRLCCRRSLLTHVDIIREVV 60 Query: 281 SY 286 +Y Sbjct: 61 NY 62 [152][TOP] >UniRef100_Q46CK8 DNA-directed RNA polymerase subunit N n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=RPON_METBF Length = 62 Score = 72.0 bits (175), Expect = 2e-11 Identities = 32/62 (51%), Positives = 41/62 (66%) Frame = +2 Query: 104 IIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLLS 283 +IPVRCF+CGKVI N Y + N LD LG+ RYCCRRMLL+HV+L++ L Sbjct: 1 MIPVRCFSCGKVISNYWDEYKRRVSDGENAAAVLDDLGITRYCCRRMLLSHVELVDVLSP 60 Query: 284 YK 289 Y+ Sbjct: 61 YQ 62 [153][TOP] >UniRef100_UPI00003C8433 DNA-directed RNA polymerase subunit N n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI00003C8433 Length = 73 Score = 71.2 bits (173), Expect = 3e-11 Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 10/72 (13%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLK----------TDHNEGDALDKLGLKRYCCRRMLL 250 MIIPVRCF+CGKVIG+ + ++E K T + + LD LG+ RYCCRRM+L Sbjct: 1 MIIPVRCFSCGKVIGSDYVRFVEESKKIRKDTGHDPTGKEKSEILDNLGVDRYCCRRMIL 60 Query: 251 AHVDLIEKLLSY 286 ++ DL+++++SY Sbjct: 61 SNADLLDEVISY 72 [154][TOP] >UniRef100_C8S9N0 RNA polymerase, N/8 Kd subunit n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S9N0_FERPL Length = 72 Score = 71.2 bits (173), Expect = 3e-11 Identities = 30/62 (48%), Positives = 41/62 (66%) Frame = +2 Query: 104 IIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLLS 283 + PVRCFTCG VI +K + Y LL + +ALD LG++RYCCRRM H ++E+L Sbjct: 1 MFPVRCFTCGAVIAHKWEEYKRLLSEGKSPREALDSLGIERYCCRRMFFTHKSVVEELAR 60 Query: 284 YK 289 Y+ Sbjct: 61 YR 62 [155][TOP] >UniRef100_B1YC34 DNA-directed RNA polymerase subunit N n=1 Tax=Thermoproteus neutrophilus V24Sta RepID=RPON_THENV Length = 66 Score = 71.2 bits (173), Expect = 3e-11 Identities = 30/63 (47%), Positives = 44/63 (69%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIPVRCFTCG+ +G+ + + + G+ LD LG+ RYCCRR LL+HV+ I+ +L Sbjct: 1 MIIPVRCFTCGRPLGHLYPIFKRRVLAGERPGEVLDSLGVYRYCCRRTLLSHVEWIDDVL 60 Query: 281 SYK 289 +Y+ Sbjct: 61 AYE 63 [156][TOP] >UniRef100_A1RSD9 DNA-directed RNA polymerase subunit N n=1 Tax=Pyrobaculum islandicum DSM 4184 RepID=RPON_PYRIL Length = 66 Score = 71.2 bits (173), Expect = 3e-11 Identities = 30/63 (47%), Positives = 44/63 (69%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MI+P+RCFTCGK +G+ + + + + G LD+LG+ RYCCRR L+AHV+ I+ LL Sbjct: 1 MIVPIRCFTCGKPLGHLYITFKHRVLAGEHPGRVLDELGVHRYCCRRTLIAHVEWIDDLL 60 Query: 281 SYK 289 Y+ Sbjct: 61 VYE 63 [157][TOP] >UniRef100_B8D6F4 DNA-directed RNA polymerase subunit N n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D6F4_DESK1 Length = 76 Score = 70.5 bits (171), Expect = 6e-11 Identities = 28/62 (45%), Positives = 44/62 (70%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 ++ PVRCFTCGK IG+ + Y++ ++ N LD LG+KRYCCRRM L++ D+ +++L Sbjct: 11 LLFPVRCFTCGKPIGHLWEEYIKRVENGENPAKVLDDLGVKRYCCRRMFLSYTDISKEIL 70 Query: 281 SY 286 + Sbjct: 71 YF 72 [158][TOP] >UniRef100_A1RWV6 DNA-directed RNA polymerase, subunit N n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWV6_THEPD Length = 90 Score = 70.5 bits (171), Expect = 6e-11 Identities = 28/64 (43%), Positives = 41/64 (64%) Frame = +2 Query: 95 SNMIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEK 274 + M+ P+RCFTCG +IG+K Y + + LD LG+ RYCCRRM L+H + I+K Sbjct: 13 TRMMFPIRCFTCGALIGDKWNEYSTRVANGEDPNKVLDDLGITRYCCRRMFLSHTEAIDK 72 Query: 275 LLSY 286 ++ Y Sbjct: 73 IIKY 76 [159][TOP] >UniRef100_Q8ZYP9 DNA-directed RNA polymerase subunit N n=1 Tax=Pyrobaculum aerophilum RepID=RPON_PYRAE Length = 66 Score = 70.5 bits (171), Expect = 6e-11 Identities = 30/63 (47%), Positives = 43/63 (68%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCGK +G+ + + + + G LD LG+ RYCCRR L+AHV+ I+ +L Sbjct: 1 MIIPIRCFTCGKPLGHLYAVFKRRVLAGEHPGRVLDDLGVTRYCCRRTLMAHVEWIDDVL 60 Query: 281 SYK 289 Y+ Sbjct: 61 LYE 63 [160][TOP] >UniRef100_B3T888 Putative RNA polymerases N / 8 kDa subunit n=1 Tax=uncultured marine crenarchaeote HF4000_APKG5C13 RepID=B3T888_9ARCH Length = 78 Score = 70.1 bits (170), Expect = 7e-11 Identities = 29/62 (46%), Positives = 42/62 (67%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MI+PVRCFTCG ++ +K + Y +K+ LD LG+ RYCCRRMLL V+ I+++L Sbjct: 1 MIVPVRCFTCGNLVADKFEEYQNRVKSGEEPAKILDSLGIDRYCCRRMLLTTVETIQQVL 60 Query: 281 SY 286 + Sbjct: 61 PF 62 [161][TOP] >UniRef100_C7NMY3 RNA polymerase, N/8 Kd subunit n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NMY3_HALUD Length = 64 Score = 69.7 bits (169), Expect = 9e-11 Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDA-LDKLGLKRYCCRRMLLAHVDLIEKL 277 M+IPVRCFTCG VIGN+ + + E + + +A LD+LG+ R+CCRRML++H DL++ + Sbjct: 1 MMIPVRCFTCGTVIGNEWEEFKERAREGEEDPEAVLDELGVDRHCCRRMLVSHEDLVDVV 60 Query: 278 LSYK 289 Y+ Sbjct: 61 SPYQ 64 [162][TOP] >UniRef100_Q0W8C7 DNA-directed RNA polymerase subunit N n=1 Tax=uncultured methanogenic archaeon RC-I RepID=RPON_UNCMA Length = 71 Score = 69.7 bits (169), Expect = 9e-11 Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 9/71 (12%) Frame = +2 Query: 104 IIPVRCFTCGKVIGNKHQAYL-----ELLKTDHNE----GDALDKLGLKRYCCRRMLLAH 256 +IPVRCFTCGKVI + Y + H E GD LD LG++RYCCRRMLL+H Sbjct: 1 MIPVRCFTCGKVISEVWEEYKARVEERKMNLQHGEVLKVGDILDDLGVERYCCRRMLLSH 60 Query: 257 VDLIEKLLSYK 289 V+L++ L Y+ Sbjct: 61 VELVDVLAPYQ 71 [163][TOP] >UniRef100_B1L5N0 DNA-directed RNA polymerase, subunit N n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L5N0_KORCO Length = 67 Score = 69.3 bits (168), Expect = 1e-10 Identities = 27/61 (44%), Positives = 42/61 (68%) Frame = +2 Query: 104 IIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLLS 283 + P+RCFTCG VIG+K + + + + G+ LD + +KRYCCRRM L+H++L + LS Sbjct: 1 MFPIRCFTCGSVIGDKWEEFSRRVMAGEDPGEVLDSMNIKRYCCRRMFLSHIELSDLELS 60 Query: 284 Y 286 + Sbjct: 61 F 61 [164][TOP] >UniRef100_B3T4Z6 Putative RNA polymerases N / 8 kDa subunit n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW137N18 RepID=B3T4Z6_9ARCH Length = 78 Score = 68.9 bits (167), Expect = 2e-10 Identities = 27/62 (43%), Positives = 42/62 (67%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 M++PVRCFTCG ++ +K + Y +K+ LD LG+ RYCCRRM+L V+ I+++L Sbjct: 1 MLVPVRCFTCGNLVADKFEEYQNRVKSGEEPAKILDSLGIDRYCCRRMMLTTVETIQQIL 60 Query: 281 SY 286 + Sbjct: 61 PF 62 [165][TOP] >UniRef100_Q2Q0G7 DNA-directed RNA polymerase subunit N n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G7_9ZZZZ Length = 68 Score = 68.6 bits (166), Expect = 2e-10 Identities = 27/62 (43%), Positives = 42/62 (67%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 M+IPVRC++CGKV+ + ++ Y+E + + LD L L RYCCRRM + H+DLI+ + Sbjct: 1 MLIPVRCWSCGKVVAHLYKKYVERTAAGEDPQEVLDDLALSRYCCRRMFVGHIDLIDDIA 60 Query: 281 SY 286 + Sbjct: 61 PF 62 [166][TOP] >UniRef100_B3T069 Putative RNA polymerases N / 8 kDa subunit n=1 Tax=uncultured marine microorganism HF4000_001N02 RepID=B3T069_9ZZZZ Length = 68 Score = 68.6 bits (166), Expect = 2e-10 Identities = 27/62 (43%), Positives = 43/62 (69%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 M+IPVRC++CGKV+ + ++ Y + + LD LGL+RYCCRRM + H+DLI+++ Sbjct: 1 MLIPVRCWSCGKVVAHLYEQYKTAVDAGEDAEKVLDDLGLERYCCRRMYVGHIDLIDEIA 60 Query: 281 SY 286 + Sbjct: 61 PF 62 [167][TOP] >UniRef100_A9A430 RNA polymerase, N/8 Kd subunit n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=A9A430_NITMS Length = 90 Score = 68.6 bits (166), Expect = 2e-10 Identities = 28/62 (45%), Positives = 43/62 (69%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 M+IPVRCFTCG +I +K+ Y +K + L+ LG++RYCCRRMLL V+ I++++ Sbjct: 13 MLIPVRCFTCGNLIADKYDDYQNKIKAGEDPEKTLESLGIERYCCRRMLLTTVETIQQVI 72 Query: 281 SY 286 + Sbjct: 73 PF 74 [168][TOP] >UniRef100_Q979K0 DNA-directed RNA polymerase subunit N n=1 Tax=Thermoplasma volcanium RepID=RPON_THEVO Length = 72 Score = 68.6 bits (166), Expect = 2e-10 Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 9/71 (12%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEG---------DALDKLGLKRYCCRRMLLA 253 MIIPVRCF+CG+VI + + YL + +EG D LG++RYCCRRM+++ Sbjct: 1 MIIPVRCFSCGRVIASDYGRYLRRINEIRSEGREPTAEEIEKIFDDLGVERYCCRRMIIS 60 Query: 254 HVDLIEKLLSY 286 HVDLI +++ + Sbjct: 61 HVDLINEIMPF 71 [169][TOP] >UniRef100_P39472 DNA-directed RNA polymerase subunit N n=1 Tax=Sulfolobus acidocaldarius RepID=RPON_SULAC Length = 66 Score = 68.6 bits (166), Expect = 2e-10 Identities = 28/62 (45%), Positives = 43/62 (69%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCG V+ +K + + + + L +LG+ RYCCRRMLL+HV++I +++ Sbjct: 1 MIIPIRCFTCGAVVADKWEPFSNRVMGGEDPEKVLTELGVNRYCCRRMLLSHVNIIREII 60 Query: 281 SY 286 Y Sbjct: 61 HY 62 [170][TOP] >UniRef100_Q8PW43 DNA-directed RNA polymerase subunit N n=1 Tax=Methanosarcina mazei RepID=RPON_METMA Length = 62 Score = 68.6 bits (166), Expect = 2e-10 Identities = 31/62 (50%), Positives = 40/62 (64%) Frame = +2 Query: 104 IIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLLS 283 +IPVRCF+CGKVI N Y + + LD LG+ RYCCRRM L+HV+LI+ L Sbjct: 1 MIPVRCFSCGKVISNYWDEYKRRVTDGEDAAAVLDDLGITRYCCRRMFLSHVELIDVLSP 60 Query: 284 YK 289 Y+ Sbjct: 61 YQ 62 [171][TOP] >UniRef100_B0R4Y6 DNA-directed RNA polymerase subunit N n=2 Tax=Halobacterium salinarum RepID=RPON_HALS3 Length = 66 Score = 68.6 bits (166), Expect = 2e-10 Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 3/66 (4%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKT---DHNEGDALDKLGLKRYCCRRMLLAHVDLIE 271 M++PVRCF+CG V+G +A+ +T D + D LD LG+ R+CCRRML+AH DL++ Sbjct: 1 MMVPVRCFSCGTVVGEHWEAFKARAETHDGDEDPADVLDDLGVDRHCCRRMLIAHQDLVD 60 Query: 272 KLLSYK 289 + Y+ Sbjct: 61 VVSPYQ 66 [172][TOP] >UniRef100_A3DMR0 DNA-directed RNA polymerase subunit N n=1 Tax=Staphylothermus marinus F1 RepID=RPON_STAMF Length = 66 Score = 68.2 bits (165), Expect = 3e-10 Identities = 27/62 (43%), Positives = 44/62 (70%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 M+ PVRCFTCG IG+ + + + ++ + G LD LG+KRYCCRRM L+H+++ ++L Sbjct: 1 MMFPVRCFTCGAPIGHLWEEFKKRVEAGEDPGKVLDDLGVKRYCCRRMFLSHIEISYEIL 60 Query: 281 SY 286 ++ Sbjct: 61 NF 62 [173][TOP] >UniRef100_Q6L292 DNA-directed RNA polymerase subunit N n=1 Tax=Picrophilus torridus RepID=RPON_PICTO Length = 72 Score = 68.2 bits (165), Expect = 3e-10 Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 10/72 (13%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNE----------GDALDKLGLKRYCCRRMLL 250 MIIPVRCF+CG+VI + + + E NE LD LG+KRYCCRRM+L Sbjct: 1 MIIPVRCFSCGRVIASDYVRFTEACTKIINETGREPRGEEKAKILDDLGVKRYCCRRMIL 60 Query: 251 AHVDLIEKLLSY 286 +H DLI+++L Y Sbjct: 61 SHKDLIDEVLPY 72 [174][TOP] >UniRef100_A2SSV3 DNA-directed RNA polymerase subunit N n=1 Tax=Methanocorpusculum labreanum Z RepID=RPON_METLZ Length = 62 Score = 68.2 bits (165), Expect = 3e-10 Identities = 30/61 (49%), Positives = 40/61 (65%) Frame = +2 Query: 104 IIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLLS 283 +IPVRCFTCGKVI + Y + + + LD LGL RYCCRRMLL+H + +++L Sbjct: 1 MIPVRCFTCGKVISTVWEEYQQRKAAGEDPKEILDSLGLDRYCCRRMLLSHKETVDELYP 60 Query: 284 Y 286 Y Sbjct: 61 Y 61 [175][TOP] >UniRef100_Q8TT41 DNA-directed RNA polymerase subunit N n=1 Tax=Methanosarcina acetivorans RepID=RPON_METAC Length = 62 Score = 68.2 bits (165), Expect = 3e-10 Identities = 30/62 (48%), Positives = 39/62 (62%) Frame = +2 Query: 104 IIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLLS 283 +IPVRCF+CGKVI N Y + LD LG+ RYCCRRM L+HV+L++ L Sbjct: 1 MIPVRCFSCGKVISNYWDEYKRRVTDGEGSAAVLDDLGITRYCCRRMFLSHVELVDVLSP 60 Query: 284 YK 289 Y+ Sbjct: 61 YQ 62 [176][TOP] >UniRef100_Q18G60 DNA-directed RNA polymerase subunit N n=1 Tax=Haloquadratum walsbyi DSM 16790 RepID=RPON_HALWD Length = 64 Score = 68.2 bits (165), Expect = 3e-10 Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 2/65 (3%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNE--GDALDKLGLKRYCCRRMLLAHVDLIEK 274 M+IPVRCFTCG VIG + + + D NE G+ LD LG+KR+CCRRM+++H DL++ Sbjct: 1 MMIPVRCFTCGTVIGEHWDEFKQRAR-DGNEDPGEVLDDLGIKRHCCRRMMVSHRDLVDV 59 Query: 275 LLSYK 289 + Y+ Sbjct: 60 VAPYQ 64 [177][TOP] >UniRef100_B9LPW4 DNA-directed RNA polymerase subunit N n=1 Tax=Halorubrum lacusprofundi ATCC 49239 RepID=RPON_HALLT Length = 64 Score = 67.8 bits (164), Expect = 4e-10 Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKT-DHNEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 M+IPVRCFTCG V+G + + E + D + G LD+LG+ R+CCRRM+++H DL++ + Sbjct: 1 MMIPVRCFTCGNVVGEHWEEFKERAREGDEDPGKVLDELGVDRHCCRRMMVSHRDLVDVV 60 Query: 278 LSYK 289 Y+ Sbjct: 61 SPYQ 64 [178][TOP] >UniRef100_B8GEG1 DNA-directed RNA polymerase subunit N n=1 Tax=Methanosphaerula palustris E1-9c RepID=RPON_METPE Length = 62 Score = 67.4 bits (163), Expect = 5e-10 Identities = 30/62 (48%), Positives = 41/62 (66%) Frame = +2 Query: 104 IIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLLS 283 +IPVRCFTCGKVI + + + + G LD LGL +YCCRRMLL H ++I++L Sbjct: 1 MIPVRCFTCGKVISTAWEEFKQRRDAGEDPGAILDDLGLTQYCCRRMLLTHKEIIDELNP 60 Query: 284 YK 289 Y+ Sbjct: 61 YQ 62 [179][TOP] >UniRef100_B8BNG7 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=B8BNG7_ORYSI Length = 223 Score = 67.0 bits (162), Expect = 6e-10 Identities = 41/86 (47%), Positives = 46/86 (53%), Gaps = 22/86 (25%) Frame = +2 Query: 95 SNMIIPVRCFTCGK----------VIGNKHQAYLELL------------KTDHNEGDALD 208 S MIIPVRCFTCGK +G+ + LL DALD Sbjct: 128 SEMIIPVRCFTCGKWQWKTARGGEALGSNGRDRDGLLWGGGRQLADGDADLSMRTWDALD 187 Query: 209 KLGLKRYCCRRMLLAHVDLIEKLLSY 286 LGL RYCCRRML+ HVDLIEKLL+Y Sbjct: 188 ALGLVRYCCRRMLMTHVDLIEKLLNY 213 [180][TOP] >UniRef100_B9ZE21 RNA polymerase, N/8 Kd subunit n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZE21_NATMA Length = 64 Score = 67.0 bits (162), Expect = 6e-10 Identities = 32/68 (47%), Positives = 45/68 (66%), Gaps = 5/68 (7%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGD-----ALDKLGLKRYCCRRMLLAHVDL 265 M++PVRCFTCG V+G + + E NEGD LD+LG+ RYCCRRML++H DL Sbjct: 1 MMVPVRCFTCGTVVGEHWEEFDERA----NEGDEDPEKVLDELGVDRYCCRRMLVSHTDL 56 Query: 266 IEKLLSYK 289 ++ + Y+ Sbjct: 57 VDVVSPYQ 64 [181][TOP] >UniRef100_A0RY12 DNA-directed RNA polymerase, subunit N n=1 Tax=Cenarchaeum symbiosum RepID=A0RY12_CENSY Length = 78 Score = 66.6 bits (161), Expect = 8e-10 Identities = 25/62 (40%), Positives = 41/62 (66%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 M++PVRCFTCG ++ +K Y ++ G LD LG++RYCCRRML ++ I++++ Sbjct: 1 MLVPVRCFTCGNLVADKFGEYKSRVEAGEAPGKVLDSLGMERYCCRRMLFTSIETIQQII 60 Query: 281 SY 286 + Sbjct: 61 PF 62 [182][TOP] >UniRef100_A8M9S4 DNA-directed RNA polymerase subunit N n=1 Tax=Caldivirga maquilingensis IC-167 RepID=RPON_CALMQ Length = 67 Score = 66.6 bits (161), Expect = 8e-10 Identities = 28/62 (45%), Positives = 42/62 (67%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MI+P+RC+TCG+ +G+ + + + + G LD L + RYCCRR LLAHV+LI ++L Sbjct: 1 MIVPIRCWTCGRPLGHLWEPFRNRVLAGEDPGKVLDDLHVTRYCCRRTLLAHVELINQVL 60 Query: 281 SY 286 Y Sbjct: 61 PY 62 [183][TOP] >UniRef100_Q9HL09 DNA-directed RNA polymerase subunit N n=1 Tax=Thermoplasma acidophilum RepID=RPON_THEAC Length = 72 Score = 66.2 bits (160), Expect = 1e-09 Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 9/71 (12%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEG---------DALDKLGLKRYCCRRMLLA 253 MIIPVRCF+CG+VI + + Y++ + EG D LG++RYCCRRM+++ Sbjct: 1 MIIPVRCFSCGRVIASDYGRYIKRVNEIKAEGRDPSPEEIEKIFDDLGIERYCCRRMIVS 60 Query: 254 HVDLIEKLLSY 286 HVDLI +++ + Sbjct: 61 HVDLISEIMPF 71 [184][TOP] >UniRef100_Q2FTN7 DNA-directed RNA polymerase subunit N n=1 Tax=Methanospirillum hungatei JF-1 RepID=RPON_METHJ Length = 62 Score = 66.2 bits (160), Expect = 1e-09 Identities = 29/62 (46%), Positives = 40/62 (64%) Frame = +2 Query: 104 IIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLLS 283 +IPVRCFTCGKVI ++ + + LD LG+ RYCCRRMLL H ++I++L Sbjct: 1 MIPVRCFTCGKVISTAYEEFKRRRDASEDPKRILDDLGMDRYCCRRMLLTHKEIIDELNP 60 Query: 284 YK 289 Y+ Sbjct: 61 YQ 62 [185][TOP] >UniRef100_C1V6C4 DNA-directed RNA polymerase, subunit N n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1V6C4_9EURY Length = 64 Score = 65.9 bits (159), Expect = 1e-09 Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 1/64 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKT-DHNEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 M+IPVRCFTCG V+G + + D N LD+LG++R+CCRRM+++H DL++ + Sbjct: 1 MMIPVRCFTCGNVVGEHWDEFKARAREGDENPAKVLDELGVERHCCRRMMVSHKDLVDVV 60 Query: 278 LSYK 289 Y+ Sbjct: 61 APYQ 64 [186][TOP] >UniRef100_A3CWI3 DNA-directed RNA polymerase subunit N n=1 Tax=Methanoculleus marisnigri JR1 RepID=RPON_METMJ Length = 62 Score = 65.9 bits (159), Expect = 1e-09 Identities = 30/62 (48%), Positives = 39/62 (62%) Frame = +2 Query: 104 IIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLLS 283 +IPVRCFTCGKV+ + + E + LD LGL+RYCCRRMLL H + +E L Sbjct: 1 MIPVRCFTCGKVVSTAWKEFKERRDAGEDPKRILDDLGLERYCCRRMLLTHKETVEDLNP 60 Query: 284 YK 289 Y+ Sbjct: 61 YQ 62 [187][TOP] >UniRef100_C7DIN4 RNA polymerase, N/8 Kd subunit n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIN4_9EURY Length = 69 Score = 65.5 bits (158), Expect = 2e-09 Identities = 28/62 (45%), Positives = 44/62 (70%), Gaps = 1/62 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELL-KTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 M++PVRCFTCG V+ +K + Y + K + LD+LG KRYCCRRM +++V+LI++ Sbjct: 4 MMMPVRCFTCGAVVADKWEEYNNRVNKNGEDASKVLDELGFKRYCCRRMFISNVELIDEF 63 Query: 278 LS 283 ++ Sbjct: 64 IN 65 [188][TOP] >UniRef100_A7IAH1 DNA-directed RNA polymerase subunit N n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=RPON_METB6 Length = 62 Score = 65.5 bits (158), Expect = 2e-09 Identities = 30/62 (48%), Positives = 40/62 (64%) Frame = +2 Query: 104 IIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLLS 283 +IPVRCFTCGKVI + Y + + LD LG+ RYCCRRMLL H ++I++L Sbjct: 1 MIPVRCFTCGKVISPAWEEYKARREKGEDPKKILDDLGITRYCCRRMLLTHKEIIDELNP 60 Query: 284 YK 289 Y+ Sbjct: 61 YQ 62 [189][TOP] >UniRef100_Q9YB47 DNA-directed RNA polymerase subunit N n=1 Tax=Aeropyrum pernix RepID=RPON_AERPE Length = 77 Score = 65.5 bits (158), Expect = 2e-09 Identities = 29/63 (46%), Positives = 40/63 (63%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 M+ PVRCFTCG+ +G+ + EL+ + G+ALD+LG+ RYCCRR L V IE Sbjct: 1 MLPPVRCFTCGRPLGHLWPRFRELVASGKTPGEALDELGVDRYCCRRTLFTSVTYIEHAA 60 Query: 281 SYK 289 Y+ Sbjct: 61 KYR 63 [190][TOP] >UniRef100_Q12TI4 DNA-directed RNA polymerase subunit N n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=RPON_METBU Length = 62 Score = 65.1 bits (157), Expect = 2e-09 Identities = 29/62 (46%), Positives = 37/62 (59%) Frame = +2 Query: 104 IIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLLS 283 +IPVRCFTCGKVI + Y + LD L RYCCRRM LAHV+L++ + Sbjct: 1 MIPVRCFTCGKVIAGSWEEYKRRTGEGEDPATVLDDLKFVRYCCRRMFLAHVELVDTMAP 60 Query: 284 YK 289 Y+ Sbjct: 61 YQ 62 [191][TOP] >UniRef100_O29135 DNA-directed RNA polymerase subunit N n=1 Tax=Archaeoglobus fulgidus RepID=RPON_ARCFU Length = 76 Score = 65.1 bits (157), Expect = 2e-09 Identities = 26/56 (46%), Positives = 40/56 (71%) Frame = +2 Query: 110 PVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 P+RCF+CG VIG+ + Y + L + +ALD+LG++RYCCRRM + H +I++L Sbjct: 13 PIRCFSCGAVIGHLYDEYKQKLSEGKSPKEALDELGIERYCCRRMFITHKSVIKEL 68 [192][TOP] >UniRef100_B5IBF8 RNA polymerases N / 8 kDa subunit superfamily n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IBF8_9EURY Length = 73 Score = 64.3 bits (155), Expect = 4e-09 Identities = 30/72 (41%), Positives = 50/72 (69%), Gaps = 10/72 (13%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLE----LLKTDHNEGDA------LDKLGLKRYCCRRMLL 250 MIIPVRCF+CG+VI + + A++ + +T++ E D++G+KRYCCRRM+L Sbjct: 1 MIIPVRCFSCGRVIASDYIAFVNKVNLIRETENREPTPEEIQRIFDEIGVKRYCCRRMIL 60 Query: 251 AHVDLIEKLLSY 286 +HV+LI+ +++ Sbjct: 61 SHVNLIDDTMAF 72 [193][TOP] >UniRef100_Q3IQT2 DNA-directed RNA polymerase subunit N n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=RPON_NATPD Length = 64 Score = 64.3 bits (155), Expect = 4e-09 Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKT-DHNEGDALDKLGLKRYCCRRMLLAHVDLIEKL 277 M++PVRCFTCG V+G + E + D + + LD+LG++R CCRRML++H DL++ + Sbjct: 1 MMVPVRCFTCGTVVGEHWGEFKERAREGDEDPAEVLDELGVERACCRRMLVSHKDLVDIV 60 Query: 278 LSYK 289 Y+ Sbjct: 61 SPYQ 64 [194][TOP] >UniRef100_UPI000186F134 transcription initiation factor supt3, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186F134 Length = 317 Score = 63.9 bits (154), Expect = 5e-09 Identities = 31/48 (64%), Positives = 33/48 (68%) Frame = +2 Query: 143 GNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLLSY 286 G +A T GDALD LGLKRYCCRRMLL HVDLIEKLL+Y Sbjct: 265 GEIREAMRRFESTQTTPGDALDALGLKRYCCRRMLLGHVDLIEKLLNY 312 [195][TOP] >UniRef100_UPI0000D9ABE2 PREDICTED: similar to DNA-directed RNA polymerase II 7.6 kDa polypeptide (RPB10) (RPB7.6) (RPABC5) n=1 Tax=Macaca mulatta RepID=UPI0000D9ABE2 Length = 107 Score = 63.5 bits (153), Expect = 7e-09 Identities = 33/58 (56%), Positives = 42/58 (72%) Frame = +2 Query: 113 VRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLLSY 286 VRCFTC K +GN +AYL LL+ + + DAL +L +CC MLLAHVDLI+KLL+Y Sbjct: 48 VRCFTCSKTVGNTWEAYLGLLQAKYTDRDAL-RLKHYSHCC--MLLAHVDLIQKLLNY 102 [196][TOP] >UniRef100_A8A8W9 DNA-directed RNA polymerase, subunit N n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8W9_IGNH4 Length = 68 Score = 62.8 bits (151), Expect = 1e-08 Identities = 22/61 (36%), Positives = 43/61 (70%) Frame = +2 Query: 104 IIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLLS 283 ++P+RC+TCG+ + +++ +L ++ G LD LG+KRYCCRR +L+ VD+ ++++ Sbjct: 1 MLPIRCYTCGRPLWPEYEEFLRRVEAGEEPGKVLDDLGIKRYCCRRTMLSAVDISKEIIK 60 Query: 284 Y 286 + Sbjct: 61 F 61 [197][TOP] >UniRef100_Q2NG00 RpoN n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NG00_METST Length = 55 Score = 62.4 bits (150), Expect = 2e-08 Identities = 26/51 (50%), Positives = 33/51 (64%) Frame = +2 Query: 113 VRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDL 265 VRCFTCGKVI + + K N D LD LG+ +YCCRRM ++HVD+ Sbjct: 4 VRCFTCGKVISASFDEFEKRTKAGENPNDVLDDLGITKYCCRRMFISHVDV 54 [198][TOP] >UniRef100_A2BK83 DNA-directed RNA polymerase subunit N n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=RPON_HYPBU Length = 66 Score = 62.4 bits (150), Expect = 2e-08 Identities = 27/63 (42%), Positives = 41/63 (65%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 MIIP+RCFTCG+ + + + ++ + LD+LG+KRYCCR+ LLAHV I ++ Sbjct: 1 MIIPMRCFTCGRPLAQYWEEFRSRVEGGEDPRKVLDELGVKRYCCRKTLLAHVPAIYEVR 60 Query: 281 SYK 289 +K Sbjct: 61 KFK 63 [199][TOP] >UniRef100_Q2QWW6 Expressed protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2QWW6_ORYSJ Length = 202 Score = 62.0 bits (149), Expect = 2e-08 Identities = 38/93 (40%), Positives = 43/93 (46%), Gaps = 42/93 (45%) Frame = +2 Query: 134 KVIGNKHQAYLELLKTDHNEG--------------------------------------- 196 KVIGNK YL+LL+ D+ EG Sbjct: 93 KVIGNKWDLYLDLLQADYTEGGSGRQRGEERYWGLMAATEMVCYGGGGRRLADGDADLSV 152 Query: 197 ---DALDKLGLKRYCCRRMLLAHVDLIEKLLSY 286 DALD LGL RYCCRRML+ HVDLIEKLL+Y Sbjct: 153 HMWDALDALGLVRYCCRRMLMTHVDLIEKLLNY 185 [200][TOP] >UniRef100_B9GC63 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9GC63_ORYSJ Length = 144 Score = 62.0 bits (149), Expect = 2e-08 Identities = 38/93 (40%), Positives = 43/93 (46%), Gaps = 42/93 (45%) Frame = +2 Query: 134 KVIGNKHQAYLELLKTDHNEG--------------------------------------- 196 KVIGNK YL+LL+ D+ EG Sbjct: 35 KVIGNKWDLYLDLLQADYTEGGSGRQRGEERYWGLMAATEMVCYGGGGRRLADGDADLSV 94 Query: 197 ---DALDKLGLKRYCCRRMLLAHVDLIEKLLSY 286 DALD LGL RYCCRRML+ HVDLIEKLL+Y Sbjct: 95 HMWDALDALGLVRYCCRRMLMTHVDLIEKLLNY 127 [201][TOP] >UniRef100_P29199 DNA-directed RNA polymerase subunit N n=1 Tax=Haloarcula marismortui RepID=RPON_HALMA Length = 66 Score = 62.0 bits (149), Expect = 2e-08 Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 3/66 (4%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGD---ALDKLGLKRYCCRRMLLAHVDLIE 271 M++PVRCFTCG V+G + + + D LD+LG++R+CCRRML++H DL++ Sbjct: 1 MMVPVRCFTCGNVVGEHWEEFKARTREAEEPEDPEKVLDELGVERHCCRRMLVSHKDLVD 60 Query: 272 KLLSYK 289 + Y+ Sbjct: 61 IVSPYQ 66 [202][TOP] >UniRef100_UPI00005A37B8 PREDICTED: similar to DNA-directed RNA polymerase II 7.6 kDa polypeptide (RPB10) (RPB7.6) (RPABC5) n=1 Tax=Canis lupus familiaris RepID=UPI00005A37B8 Length = 154 Score = 61.2 bits (147), Expect = 3e-08 Identities = 28/30 (93%), Positives = 29/30 (96%) Frame = +2 Query: 197 DALDKLGLKRYCCRRMLLAHVDLIEKLLSY 286 DALD LGLKRYCCRRMLLAHVDLIEKLL+Y Sbjct: 120 DALDALGLKRYCCRRMLLAHVDLIEKLLNY 149 [203][TOP] >UniRef100_A6UVZ9 RNA polymerase, N/8 Kd subunits n=1 Tax=Methanococcus aeolicus Nankai-3 RepID=A6UVZ9_META3 Length = 69 Score = 60.8 bits (146), Expect = 4e-08 Identities = 24/52 (46%), Positives = 37/52 (71%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAH 256 ++ P+RCF+CG VI + Y+ LK + +ALD+LG+K+YCCRRM ++H Sbjct: 2 VMFPIRCFSCGGVISEVYGEYVSKLKEGADLSNALDELGIKKYCCRRMFISH 53 [204][TOP] >UniRef100_Q57649 DNA-directed RNA polymerase subunit N n=1 Tax=Methanocaldococcus jannaschii RepID=RPON_METJA Length = 73 Score = 60.8 bits (146), Expect = 4e-08 Identities = 24/52 (46%), Positives = 34/52 (65%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAH 256 M+ P+RCF+CG VI + Y E + N D LD LG+K+YCCRRM +++ Sbjct: 1 MMFPIRCFSCGNVIAEVFEEYKERILKGENPKDVLDDLGIKKYCCRRMFISY 52 [205][TOP] >UniRef100_O26147 DNA-directed RNA polymerase subunit N n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=RPON_METTH Length = 55 Score = 60.5 bits (145), Expect = 6e-08 Identities = 26/53 (49%), Positives = 34/53 (64%) Frame = +2 Query: 104 IIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVD 262 +IPVRC +CGK + Y + + D LD LGLKRYCCRRML++HV+ Sbjct: 1 MIPVRCLSCGKPVSAYFNEYQRRVADGEDPKDVLDDLGLKRYCCRRMLISHVE 53 [206][TOP] >UniRef100_C7NZ13 RNA polymerase, N/8 Kd subunit n=1 Tax=Halomicrobium mukohataei DSM 12286 RepID=C7NZ13_HALMD Length = 66 Score = 60.1 bits (144), Expect = 7e-08 Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 3/66 (4%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGD---ALDKLGLKRYCCRRMLLAHVDLIE 271 M++PVRCFTCG V+ + + + D LD+LG++R+CCRRML++H DL++ Sbjct: 1 MMVPVRCFTCGNVVAEHWEEFKARTREAEEPEDPEKVLDELGVERHCCRRMLVSHKDLVD 60 Query: 272 KLLSYK 289 + Y+ Sbjct: 61 IVAPYQ 66 [207][TOP] >UniRef100_Q6LXM4 DNA-directed RNA polymerase subunit N n=1 Tax=Methanococcus maripaludis RepID=RPON_METMP Length = 68 Score = 60.1 bits (144), Expect = 7e-08 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 5/68 (7%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAH-----VDL 265 MI P+RCF+CG VI ++ Y LK N + L+ L +K+YCCRRM +H +L Sbjct: 1 MIFPIRCFSCGNVISEVYEEYRTRLKNGENPEEILNDLEIKKYCCRRMFASHRLDNDREL 60 Query: 266 IEKLLSYK 289 + ++ YK Sbjct: 61 FDDIVEYK 68 [208][TOP] >UniRef100_A5UN59 DNA-directed RNA polymerase, subunit N, RpoN n=2 Tax=Methanobrevibacter smithii RepID=A5UN59_METS3 Length = 56 Score = 59.7 bits (143), Expect = 1e-07 Identities = 26/56 (46%), Positives = 34/56 (60%) Frame = +2 Query: 104 IIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIE 271 +IP+RC +CGK + Y + L D LD LGL RYCCRRML++HV+ E Sbjct: 1 MIPIRCLSCGKPVSAYFDEYNKRLAAGEKSKDILDDLGLNRYCCRRMLISHVETWE 56 [209][TOP] >UniRef100_A9A9Y7 DNA-directed RNA polymerase subunit N n=1 Tax=Methanococcus maripaludis C6 RepID=RPON_METM6 Length = 68 Score = 59.3 bits (142), Expect = 1e-07 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 5/68 (7%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAH-----VDL 265 MI P+RCF+CG VI ++ Y LK N + L+ L +K+YCCRRM +H +L Sbjct: 1 MIFPIRCFSCGAVISEVYEEYRNRLKDGENPEEILNDLEVKKYCCRRMFASHRLDNDREL 60 Query: 266 IEKLLSYK 289 + ++ YK Sbjct: 61 FDDIVEYK 68 [210][TOP] >UniRef100_A4FWK8 DNA-directed RNA polymerase subunit N n=1 Tax=Methanococcus maripaludis C5 RepID=RPON_METM5 Length = 68 Score = 59.3 bits (142), Expect = 1e-07 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 5/68 (7%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAH-----VDL 265 MI P+RCF+CG VI ++ Y LK N + L+ L +K+YCCRRM +H +L Sbjct: 1 MIFPIRCFSCGAVISEVYEEYRTRLKNGENPEEILNDLEVKKYCCRRMFASHRLDNDREL 60 Query: 266 IEKLLSYK 289 + ++ YK Sbjct: 61 FDDIVEYK 68 [211][TOP] >UniRef100_C5U5T7 RNA polymerase, N/8 Kd subunit n=1 Tax=Methanocaldococcus infernus ME RepID=C5U5T7_9EURY Length = 73 Score = 58.9 bits (141), Expect = 2e-07 Identities = 23/52 (44%), Positives = 34/52 (65%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAH 256 M+ P+RCF+CG VI + Y E + + G LD LG+K+YCCRRM +++ Sbjct: 1 MMFPIRCFSCGNVIAEVFEEYKERVLKGEDPGKVLDDLGIKKYCCRRMFISY 52 [212][TOP] >UniRef100_A6VGR3 DNA-directed RNA polymerase subunit N n=1 Tax=Methanococcus maripaludis C7 RepID=RPON_METM7 Length = 68 Score = 58.9 bits (141), Expect = 2e-07 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 5/68 (7%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAH-----VDL 265 MI P+RCF+CG VI ++ Y LK N + L+ L +K+YCCRRM +H +L Sbjct: 1 MIFPIRCFSCGAVISEVYEEYRTRLKDGENPEEILNDLEVKKYCCRRMFASHRLDNDREL 60 Query: 266 IEKLLSYK 289 + ++ YK Sbjct: 61 FDDIVEYK 68 [213][TOP] >UniRef100_C7P6X6 RNA polymerase, N/8 Kd subunit n=1 Tax=Methanocaldococcus fervens AG86 RepID=C7P6X6_METFA Length = 72 Score = 58.5 bits (140), Expect = 2e-07 Identities = 23/51 (45%), Positives = 33/51 (64%) Frame = +2 Query: 104 IIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAH 256 + P+RCF+CG VI + Y E + N D LD LG+K+YCCRRM +++ Sbjct: 1 MFPIRCFSCGNVIAEVFEEYKERVLKGENPKDVLDDLGIKKYCCRRMFISY 51 [214][TOP] >UniRef100_Q00ZB8 Chromosome 11 contig 1, DNA sequence n=1 Tax=Ostreococcus tauri RepID=Q00ZB8_OSTTA Length = 389 Score = 57.8 bits (138), Expect = 4e-07 Identities = 36/96 (37%), Positives = 55/96 (57%) Frame = -2 Query: 388 NALAGKAKRGGLQPPASTVPGASQPTRHGATASLITE*LLNQIDVR*QHPAAAITLEAQL 209 +A + +A R P S S+P A +I + LL++IDV HP+ A+ L+ Q Sbjct: 186 SAASPRASRAARNPRPSLA--RSRPVH--AFERVIPQQLLDEIDVTHHHPSTAVPLQTQR 241 Query: 208 IESVALVVVGLEELQVRLVLVANDLAACEAAHGDNH 101 ++ VAL VV L+E+QV + V + L A EA HG++H Sbjct: 242 VQGVALAVVRLQEIQVGVPFVPDHLPAREAPHGNDH 277 [215][TOP] >UniRef100_A8TGV0 RNA polymerase, N/8 Kd subunit n=1 Tax=Methanococcus voltae A3 RepID=A8TGV0_METVO Length = 68 Score = 57.0 bits (136), Expect = 6e-07 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 5/68 (7%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAH-----VDL 265 M+ PVRCF+CG V+ + Y E L + LD L + +YCCRRM +H DL Sbjct: 1 MMFPVRCFSCGTVVSEVYGEYHERLTNGEKSDEILDDLDITKYCCRRMFASHRLHNDKDL 60 Query: 266 IEKLLSYK 289 + ++ YK Sbjct: 61 FDDVMEYK 68 [216][TOP] >UniRef100_Q74MB5 DNA-directed RNA polymerase subunit N n=1 Tax=Nanoarchaeum equitans RepID=RPON_NANEQ Length = 65 Score = 57.0 bits (136), Expect = 6e-07 Identities = 25/63 (39%), Positives = 39/63 (61%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAHVDLIEKLL 280 M+ P+RCF+CGK +G+ + + E + + LD LGL+RYCCRR LL+ V + + Sbjct: 1 MLPPIRCFSCGKPLGHLWEEFNERVNKGEDPKKVLDDLGLERYCCRRTLLSAVVVFPVIA 60 Query: 281 SYK 289 +K Sbjct: 61 KFK 63 [217][TOP] >UniRef100_C9RDV4 RNA polymerase, N/8 Kd subunit n=1 Tax=Methanocaldococcus vulcanius M7 RepID=C9RDV4_9EURY Length = 73 Score = 55.5 bits (132), Expect = 2e-06 Identities = 22/52 (42%), Positives = 33/52 (63%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAH 256 M+ P+RCF+CG VI + Y E + + LD LG+K+YCCRRM +++ Sbjct: 1 MMFPIRCFSCGNVIAEVFEEYKERVLKGEDPKKVLDDLGIKKYCCRRMFVSY 52 [218][TOP] >UniRef100_A6UPX1 DNA-directed RNA polymerase subunit N n=1 Tax=Methanococcus vannielii SB RepID=RPON_METVS Length = 68 Score = 54.3 bits (129), Expect = 4e-06 Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 5/68 (7%) Frame = +2 Query: 101 MIIPVRCFTCGKVIGNKHQAYLELLKTDHNEGDALDKLGLKRYCCRRMLLAH-----VDL 265 MI P+RCF+CG VI + Y L + + L+ LG+ +YCCRRM +H +L Sbjct: 1 MIFPIRCFSCGNVISEVYDEYKTRLSNVESPEEILNDLGVTKYCCRRMFASHRLENGKEL 60 Query: 266 IEKLLSYK 289 + ++ Y+ Sbjct: 61 FDDIVEYR 68