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[1][TOP]
>UniRef100_Q0S219 Translation initiation factor IF-2 n=1 Tax=Rhodococcus jostii RHA1
RepID=IF2_RHOSR
Length = 980
Score = 59.3 bits (142), Expect = 2e-07
Identities = 50/145 (34%), Positives = 61/145 (42%), Gaps = 7/145 (4%)
Frame = +2
Query: 104 ATSTSGP*PTAAPSPRPPRQAGRAAPPRGRPANGCRCTPCPSAAPQ*ASR*GGRCWSRA* 283
A + + P P A +P P + AAP G G R P P R G +S A
Sbjct: 143 APAPAAPAPAAPAAPAAPAASAPAAPSTGAKPGGPRPGPKPP-------RVGNNPYSSAP 195
Query: 284 SRR---RCCPSTCRP----PAPGSGGPRRRRGRGGGGCPWPGPPPPRQTAWQTTPSRQSC 442
+ R R P RP PAPG GGPR G+GG P PG PR Q P
Sbjct: 196 AERPAPRPAPGAPRPGAPRPAPGQGGPRPAPGQGGPR-PAPGQGGPRPAPGQGGPRPAPG 254
Query: 443 RGGSTRPTGRRWRPSPSPAG*PTRA 517
+GG RP+ P P+P P R+
Sbjct: 255 QGG-PRPSPGSMPPRPNPGAMPARS 278
Score = 55.8 bits (133), Expect = 2e-06
Identities = 51/142 (35%), Positives = 57/142 (40%), Gaps = 7/142 (4%)
Frame = +2
Query: 104 ATSTSGP*PTAAPSPRPPR------QAGRAAPPRGRPANGCRCTPCPSAAPQ*ASR*GGR 265
A ST P P+PPR + A P RPA G P P A P+ A GG
Sbjct: 167 APSTGAKPGGPRPGPKPPRVGNNPYSSAPAERPAPRPAPGA---PRPGA-PRPAPGQGGP 222
Query: 266 CWSRA*SRRRCCPSTCRP-PAPGSGGPRRRRGRGGGGCPWPGPPPPRQTAWQTTPSRQSC 442
+ R P P PAPG GGPR G+GG P PG PPR P
Sbjct: 223 RPAPGQGGPRPAPGQGGPRPAPGQGGPRPAPGQGGPR-PSPGSMPPRPN-----PGAMPA 276
Query: 443 RGGSTRPTGRRWRPSPSPAG*P 508
R P GR RP +P G P
Sbjct: 277 RSARPAPGGRPGRPGGAPGGRP 298
[2][TOP]
>UniRef100_UPI0001BB056E translation initiation factor IF-2 n=1 Tax=Gordonia bronchialis DSM
43247 RepID=UPI0001BB056E
Length = 938
Score = 58.5 bits (140), Expect = 3e-07
Identities = 48/140 (34%), Positives = 60/140 (42%), Gaps = 2/140 (1%)
Frame = +2
Query: 104 ATSTSGP*PTAAPSPRPPRQAGRAAP-PRGRPANGCRCTPCPSAAP-Q*ASR*GGRCWSR 277
A + + P P AA + A +AAP P +PA G P P P A R G +S
Sbjct: 117 APAPAAPAPAAAEATPASAPAAQAAPAPTAKPAGGAAPGPRPGPKPGPRAPRVGNNPYSS 176
Query: 278 A*SRRRCCPSTCRPPAPGSGGPRRRRGRGGGGCPWPGPPPPRQTAWQTTPSRQSCRGGST 457
A + P P PG GGPR GGG P PG PR A + P + G
Sbjct: 177 APAP---APRPAPRPGPGQGGPRP-----GGGRPAPGQGGPRPAAGRGAPGQ-----GGP 223
Query: 458 RPTGRRWRPSPSPAG*PTRA 517
RP+ P P+P P+RA
Sbjct: 224 RPSPGSMPPRPNPGAMPSRA 243
[3][TOP]
>UniRef100_Q2J6C4 Stress protein n=1 Tax=Frankia sp. CcI3 RepID=Q2J6C4_FRASC
Length = 493
Score = 57.0 bits (136), Expect = 8e-07
Identities = 47/151 (31%), Positives = 60/151 (39%), Gaps = 7/151 (4%)
Frame = +2
Query: 77 DICITV---GTVATSTSGP*PTAAPSPRPPRQAGRAAPPRGRPANGCRCTPCPSAAPQ*A 247
D ITV GT +T P AP A PP GR P P+ P+
Sbjct: 158 DFGITVDDPGTSEAATQVVQPPVAPPHPQAAPAPYGTPPGGRQWGPPPPAPTPAGGPRWG 217
Query: 248 SR*GGRCWSRA*SRRRCCPSTCRPPAPGS-GGPRRRRGRGGGGCPW-PGPPPPRQTAWQT 421
S+ GG+ W PPAPG+ G P+ + G W P PPPP Q W
Sbjct: 218 SQPGGQQWGPP------------PPAPGAPGQPQWGTPQPPPGQQWGPPPPPPAQPQWGP 265
Query: 422 TPSRQSCRG--GSTRPTGRRWRPSPSPAG*P 508
P+ G ++P G++W P P G P
Sbjct: 266 PPAPTPAGGPQWGSQPGGQQWGPPPPAPGAP 296
[4][TOP]
>UniRef100_UPI000179EE74 UPI000179EE74 related cluster n=1 Tax=Bos taurus
RepID=UPI000179EE74
Length = 633
Score = 56.6 bits (135), Expect = 1e-06
Identities = 53/151 (35%), Positives = 62/151 (41%), Gaps = 25/151 (16%)
Frame = +2
Query: 122 P*PTAAPS--PRPPRQAGRAAP---PRGRPA-----NGCRCTPC----------PSAAPQ 241
P PT P P PP AGR P P PA RC PC P +P+
Sbjct: 470 PCPTPPPRRLPLPPPSAGRPGPGGAPAREPACPLPPGAARCRPCQPGRRSAAGSPWPSPR 529
Query: 242 *ASR*GGRCWSRA*SRRRCCPSTCRPPAPGSGGPRRRRGRGGGGCPWPGPPPPRQTAWQT 421
GG +R + C P T RPPAP G RR G P P PPPP +
Sbjct: 530 SVGPGGGA--ARPAAPAGCGPGTPRPPAPAPRGARRTPSPLARGPPAP-PPPPLSPG--S 584
Query: 422 TPSRQSCRGGSTRPT-----GRRWRPSPSPA 499
PSR + RG P+ GRR SP+P+
Sbjct: 585 RPSRLAPRGPGKAPSVPREPGRRTFSSPAPS 615
[5][TOP]
>UniRef100_C0ZYA5 Translation initiation factor IF-2 n=1 Tax=Rhodococcus erythropolis
PR4 RepID=IF2_RHOE4
Length = 981
Score = 56.6 bits (135), Expect = 1e-06
Identities = 52/165 (31%), Positives = 66/165 (40%), Gaps = 27/165 (16%)
Frame = +2
Query: 104 ATSTSGP*PTAAPSPRP----PRQAGRAAPPRGRPANGCRCTPCPSAAPQ*ASR*GG--- 262
A + + P +AP P P P+ A A P PA P AAP ++ GG
Sbjct: 113 APAAAAPAAPSAPVPTPTFNAPKPAQPARPAPAAPAASAPAAPAAPAAPSTGAKPGGPRP 172
Query: 263 ---------RCWSRA*SRR---RCCPSTCRP--------PAPGSGGPRRRRGRGGGGCPW 382
+S A + R R P RP PAPG GGPR G+GG P
Sbjct: 173 GPKAPRVGNNPYSSAPAERPAPRPAPGAPRPGAGQGGSRPAPGQGGPRPAPGQGGPR-PA 231
Query: 383 PGPPPPRQTAWQTTPSRQSCRGGSTRPTGRRWRPSPSPAG*PTRA 517
PG PR Q P + +GG RP+ P P+P P R+
Sbjct: 232 PGQGGPRPAPGQGGPRPPAGQGG-PRPSPGSMPPRPNPGAMPARS 275
[6][TOP]
>UniRef100_C1B313 Translation initiation factor IF-2 n=1 Tax=Rhodococcus opacus B4
RepID=IF2_RHOOB
Length = 974
Score = 55.8 bits (133), Expect = 2e-06
Identities = 51/142 (35%), Positives = 57/142 (40%), Gaps = 7/142 (4%)
Frame = +2
Query: 104 ATSTSGP*PTAAPSPRPPR------QAGRAAPPRGRPANGCRCTPCPSAAPQ*ASR*GGR 265
A ST P P+PPR + A P RPA G P P A P+ A GG
Sbjct: 161 APSTGAKPGGPRPGPKPPRVGNNPYSSAPAERPAPRPAPGA---PRPGA-PRPAPGQGGP 216
Query: 266 CWSRA*SRRRCCPSTCRP-PAPGSGGPRRRRGRGGGGCPWPGPPPPRQTAWQTTPSRQSC 442
+ R P P PAPG GGPR G+GG P PG PPR P
Sbjct: 217 RPAPGQGGPRPAPGQGGPRPAPGQGGPRPAPGQGGPR-PSPGSMPPRPN-----PGAMPA 270
Query: 443 RGGSTRPTGRRWRPSPSPAG*P 508
R P GR RP +P G P
Sbjct: 271 RSARPAPGGRPGRPGGAPGGRP 292
Score = 55.1 bits (131), Expect = 3e-06
Identities = 50/142 (35%), Positives = 59/142 (41%), Gaps = 8/142 (5%)
Frame = +2
Query: 116 SGP*PTAAPSPRPPRQAGR-AAPPRGRPANGCRCTPCPSAAPQ*ASR*GGRCWSRA*SRR 292
+ P P A +P P A AAP G G R P P R G +S A + R
Sbjct: 140 AAPAPAAPAAPAAPAAASTPAAPSTGAKPGGPRPGPKPP-------RVGNNPYSSAPAER 192
Query: 293 ---RCCPSTCRP----PAPGSGGPRRRRGRGGGGCPWPGPPPPRQTAWQTTPSRQSCRGG 451
R P RP PAPG GGPR G+GG P PG PR Q P +GG
Sbjct: 193 PAPRPAPGAPRPGAPRPAPGQGGPRPAPGQGGPR-PAPGQGGPRPAPGQGGPRPAPGQGG 251
Query: 452 STRPTGRRWRPSPSPAG*PTRA 517
RP+ P P+P P R+
Sbjct: 252 -PRPSPGSMPPRPNPGAMPARS 272
[7][TOP]
>UniRef100_C1XNU4 CHRD domain-containing protein n=1 Tax=Meiothermus ruber DSM 1279
RepID=C1XNU4_MEIRU
Length = 158
Score = 54.7 bits (130), Expect = 4e-06
Identities = 44/132 (33%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Frame = -3
Query: 518 SPASVNPPAMGSDATGGLSVEYFHPDTIAVTGSFAKLSGEVA------VD-------LAM 378
S A V P A + A + +E T+++ G+ A L+G VD L
Sbjct: 28 SGAEVVPNAANTPALAVVRLELMG-STLSIQGAVANLAGPFRDYTRDPVDDPALNARLTS 86
Query: 377 GTHLHRGPADGAGPRFQELVADKSMGNTAGDFMLETNTFRLNATLIEALRMGMAYSDIHS 198
HLHRGP GP Q L + + FM + L+ + L G Y DIH+
Sbjct: 87 AVHLHRGPKGQNGPLLQALKVMPAPDGRSATFM---DRLELSLDDLNRLYRGELYFDIHT 143
Query: 197 QAFRAGELRGQL 162
AFRAGELRGQ+
Sbjct: 144 AAFRAGELRGQI 155
[8][TOP]
>UniRef100_Q0RCX6 Putative transport associated protein n=1 Tax=Frankia alni ACN14a
RepID=Q0RCX6_FRAAA
Length = 496
Score = 54.7 bits (130), Expect = 4e-06
Identities = 50/148 (33%), Positives = 57/148 (38%), Gaps = 18/148 (12%)
Frame = +2
Query: 113 TSGP*PTAAPSP---RPPRQAGRAAPPRGRPANGCRCTPCPSAAPQ*ASR*GGRCWSRA* 283
TSGP P AA +P RPP AAPPR +PA P A P GG+ W
Sbjct: 168 TSGPAPAAAAAPAAARPP-----AAPPRPQPATPGGQQWGPPAPPP-----GGQQWG--- 214
Query: 284 SRRRCCPSTCRP-PAPGSGGPRRRRGRGGGGCPWPGP-----------PPPRQTAWQTTP 427
P+ P PAP G P+ G P P P PPP W P
Sbjct: 215 ------PAPVPPAPAPAGGAPQ-------WGAPQPPPGQQPPPGQQWGPPPAAPQWGAPP 261
Query: 428 ---SRQSCRGGSTRPTGRRWRPSPSPAG 502
+ G PTG+ W P P PAG
Sbjct: 262 PPGQQWGPPGAPPAPTGQPWGPPPPPAG 289
[9][TOP]
>UniRef100_Q4SPJ4 Chromosome 16 SCAF14537, whole genome shotgun sequence. (Fragment)
n=1 Tax=Tetraodon nigroviridis RepID=Q4SPJ4_TETNG
Length = 193
Score = 53.5 bits (127), Expect = 8e-06
Identities = 39/95 (41%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Frame = +2
Query: 122 P*PTAAPSPRPPR---QAGRAAPPRGRPANGCRCTPCPSAAPQ*ASR*GGRCWSRA*SRR 292
P + APS RP R G A+PPRG PA P AAP +R G R + R
Sbjct: 29 PPGSPAPSRRPARARGSPGAASPPRGGPAGRG-----PRAAPPSPARRTGPGRRRRRAAR 83
Query: 293 RCCPSTCRPPAPGSGGPRRRRGRGGGGCPWPGPPP 397
P+ R PG GP RR RG G P PGP P
Sbjct: 84 GSRPAGARAGTPGRSGPGRRARRGPGPGPGPGPGP 118