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[1][TOP]
>UniRef100_Q9FEL9 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9FEL9_GALSU
Length = 220
Score = 136 bits (343), Expect = 8e-31
Identities = 71/147 (48%), Positives = 98/147 (66%), Gaps = 4/147 (2%)
Frame = +2
Query: 113 SKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLACLGLLVQ 292
SK++PF++ PPAL + +M G+V FDPLNISSYL ++W++E+E+KH RI MLA +G VQ
Sbjct: 46 SKAIPFLDRPPAL--DGSMVGDVGFDPLNISSYLDLRWLRESELKHCRIAMLAVVGWFVQ 103
Query: 293 EFFTFPFYKNAPHLATAGHDYGVKVGGMVHILIGVIIFEALTTPAIVQMINGGDRQPGYF 472
E F P + T + G M I++ FE ++TPA++QM+ G R+PGYF
Sbjct: 104 EVFHLPNQIYSASDPTEAFWKTLATGPMGQIVLWTSFFEIISTPAVIQMLQGSGREPGYF 163
Query: 473 GFDPLKLGKNPS----FAVNEVKNGRL 541
GFDPL LGKNP F ++E+KNGRL
Sbjct: 164 GFDPLGLGKNPQLYKRFQLSELKNGRL 190
[2][TOP]
>UniRef100_Q8RW55 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q8RW55_GALSU
Length = 220
Score = 136 bits (343), Expect = 8e-31
Identities = 71/147 (48%), Positives = 98/147 (66%), Gaps = 4/147 (2%)
Frame = +2
Query: 113 SKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLACLGLLVQ 292
SK++PF++ PPAL + +M G+V FDPLNISSYL ++W++E+E+KH RI MLA +G VQ
Sbjct: 46 SKAIPFLDRPPAL--DGSMVGDVGFDPLNISSYLDLRWLRESELKHCRIAMLAVVGWFVQ 103
Query: 293 EFFTFPFYKNAPHLATAGHDYGVKVGGMVHILIGVIIFEALTTPAIVQMINGGDRQPGYF 472
E F P + T + G M I++ FE ++TPA++QM+ G R+PGYF
Sbjct: 104 EVFHLPNXIYSASDPTEAFWKTLATGPMGQIVLWTSFFEIISTPAVIQMLQGSGREPGYF 163
Query: 473 GFDPLKLGKNPS----FAVNEVKNGRL 541
GFDPL LGKNP F ++E+KNGRL
Sbjct: 164 GFDPLGLGKNPQLYKRFQLSELKNGRL 190
[3][TOP]
>UniRef100_A8KCR0 Light harvesting complex protein 8 (Fragment) n=1 Tax=Guillardia
theta RepID=A8KCR0_GUITH
Length = 222
Score = 124 bits (312), Expect = 3e-27
Identities = 79/187 (42%), Positives = 107/187 (57%), Gaps = 14/187 (7%)
Frame = +2
Query: 23 SPSAVLRRGAAERVSARPVARSATTVTMRASKSVP--------FMEVPPALAENPNMPGN 178
+PS VL R AA+R +A AR+ T+ + + F+E PPAL + G+
Sbjct: 17 APSPVLPR-AAQRAAA---ARNGPTMQLYKEGQLQGATVNLYSFLERPPAL--DGTWVGD 70
Query: 179 VEFDPLNISSYLPIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLA--TAGHD 352
V FDPL S+ + ++W++EAE+KHGR+CMLA G++VQ+ + FP A TA HD
Sbjct: 71 VGFDPLGFSNIIDMRWLREAELKHGRVCMLAATGMIVQDVYQFPGVTKTFGAAKMTALHD 130
Query: 353 YGVKVGGMVHILIGVIIFEALTTPAIVQMINGGDRQPGYFGFDPLKLGKNPSFAVN---- 520
VK G M +L+ + E AIVQM+ G DRQPG FGFDPL KNP+
Sbjct: 131 AAVKQGAMQQLLLWLGFIEIFGFVAIVQMLQGSDRQPGDFGFDPLNCAKNPNALARRQLV 190
Query: 521 EVKNGRL 541
E+KNGRL
Sbjct: 191 ELKNGRL 197
[4][TOP]
>UniRef100_Q9XG28 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9XG28_GALSU
Length = 302
Score = 123 bits (308), Expect = 1e-26
Identities = 74/150 (49%), Positives = 96/150 (64%), Gaps = 7/150 (4%)
Frame = +2
Query: 113 SKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLACLGLLVQ 292
SK++PFM P L + M G+V FDPL ++ +KWM+EAE+KH RI MLA LG +VQ
Sbjct: 128 SKALPFMLWPKNL--DGTMAGDVGFDPLGFTNVFDVKWMREAELKHCRIAMLAALGFMVQ 185
Query: 293 EFFTFP---FYKNAPHLATAGHDYGVKVGGMVHILIGVIIFEALTTPAIVQMINGGDRQP 463
E +TFP F K P LA HD VK GGM IL+ VI FE ++ A+ QM+ G R+P
Sbjct: 186 ELWTFPHPYFSKVPPVLA---HDVYVKTGGMSQILLFVIFFEIISVFAVSQMME-GKREP 241
Query: 464 GYFGFDPLKLGKNP----SFAVNEVKNGRL 541
G F FDPL LGK+P + +E++NGRL
Sbjct: 242 GVFHFDPLGLGKDPDTFRKYEWSELRNGRL 271
[5][TOP]
>UniRef100_Q9M441 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9M441_GALSU
Length = 302
Score = 123 bits (308), Expect = 1e-26
Identities = 74/150 (49%), Positives = 96/150 (64%), Gaps = 7/150 (4%)
Frame = +2
Query: 113 SKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLACLGLLVQ 292
SK++PFM P L + M G+V FDPL ++ +KWM+EAE+KH RI MLA LG +VQ
Sbjct: 128 SKALPFMLWPKNL--DGTMAGDVGFDPLGFTNVFDVKWMREAELKHCRIAMLAALGFMVQ 185
Query: 293 EFFTFP---FYKNAPHLATAGHDYGVKVGGMVHILIGVIIFEALTTPAIVQMINGGDRQP 463
E +TFP F K P LA HD VK GGM IL+ VI FE ++ A+ QM+ G R+P
Sbjct: 186 ELWTFPHPYFSKVPPVLA---HDVYVKTGGMSQILLFVIFFEIISVFAVSQMME-GKREP 241
Query: 464 GYFGFDPLKLGKNP----SFAVNEVKNGRL 541
G F FDPL LGK+P + +E++NGRL
Sbjct: 242 GVFHFDPLGLGKDPDTFRKYEWSELRNGRL 271
[6][TOP]
>UniRef100_Q4GWU4 Light-harvesting complex protein Lhcc5 n=1 Tax=Rhodomonas sp. CS24
RepID=Q4GWU4_RHDS2
Length = 255
Score = 122 bits (307), Expect = 1e-26
Identities = 82/195 (42%), Positives = 112/195 (57%), Gaps = 17/195 (8%)
Frame = +2
Query: 8 GTFVPSPSAVLRRGAAERVSARPVARSATTVTM-RASKSVPFMEVPPALAENPNMPGNVE 184
G V S SA + AR A + +++ M + S ++P+++ PPAL E+ M G V
Sbjct: 8 GAVVASASAFVAPVLPSAGVARTNANAMSSMRMQKKSAAMPWLDAPPALDES--MTGYVG 65
Query: 185 FDPLNISSYLP----IKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLA--TAG 346
FDPL +SS LP +K++QEAEIKHGR+ MLA G +VQ+ FTFP + A T
Sbjct: 66 FDPLWVSSMLPDPGYVKFLQEAEIKHGRVAMLAATGAIVQDIFTFPGVTSVIGNAKMTGV 125
Query: 347 HDYGVKVGG-------MVHILIGVIIFEALTTPAIVQMINGGDRQPGYFGFDPLKLGKN- 502
HD + + G M +L+ + +FE T AIVQ NGGDR PG FGFDPL GK
Sbjct: 126 HDKFLSMEGKGGNQAAMHQLLLWLGLFEIFTAVAIVQTFNGGDRAPGDFGFDPLGFGKPN 185
Query: 503 --PSFAVNEVKNGRL 541
++ + E+KNGRL
Sbjct: 186 AIETYKLKEIKNGRL 200
[7][TOP]
>UniRef100_Q5K278 Light harvesting protein 5 (Fragment) n=1 Tax=Guillardia theta
RepID=Q5K278_GUITH
Length = 225
Score = 115 bits (287), Expect = 3e-24
Identities = 66/148 (44%), Positives = 89/148 (60%), Gaps = 7/148 (4%)
Frame = +2
Query: 119 SVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLACLGLLVQEF 298
++PF P A + G+V FDPL IS +L IKW++EAE+KH R+ MLA G + Q+
Sbjct: 53 AIPFAGRPNTPAFDGTWAGDVGFDPLTISGWLDIKWLREAELKHCRVAMLAVAGCIAQDL 112
Query: 299 FTFP----FYKNAPHLATAGHDYGVKVGGMVHILIGVIIFEALTTPAIVQMINGGDRQPG 466
F FP Y + L T HD +K G M +L + FEA++T A++QM+ G R+PG
Sbjct: 113 FRFPGAETVYSSDLKL-TKLHDAALKTGTMGQMLFWLGSFEAISTAAVIQMLQGSGRKPG 171
Query: 467 YFGFDPLKLGKNPSFA---VNEVKNGRL 541
FGFDPL LGK A + E+KNGRL
Sbjct: 172 DFGFDPLGLGKGGDRARLELAEIKNGRL 199
[8][TOP]
>UniRef100_A8KCR8 Light harvesting complex protein 10 n=1 Tax=Guillardia theta
RepID=A8KCR8_GUITH
Length = 257
Score = 114 bits (286), Expect = 3e-24
Identities = 79/198 (39%), Positives = 112/198 (56%), Gaps = 19/198 (9%)
Frame = +2
Query: 5 VGTFVPSPSAVLRRGAAERVSARPVARSATTVTMRA-SKSVPFMEVPPALAENPNMPGNV 181
+ V + +A L A A + + ++++M+A SK +P++E PPAL + M G+V
Sbjct: 7 IAASVVTATAFLAGPALPSAHAPARSNAISSMSMQARSKPLPWLEAPPAL--DGKMEGDV 64
Query: 182 EFDPLNISSYLP----IKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLA--TA 343
FDPL +SS LP IK+++EAE+KHGR+ MLA G +VQ+ FTFP A T+
Sbjct: 65 GFDPLWVSSMLPDAGWIKFLREAELKHGRVAMLAATGAIVQDIFTFPGVDKVIGAAKMTS 124
Query: 344 GHDY-------GVKVGGMVHILIGVIIFEALTTPAIVQMING-GDRQPGYFGFDPLKLGK 499
HD G KV M +L+ + + E L+ PAIVQ G R PG FGFDPL K
Sbjct: 125 AHDKYLSLEIGGSKVATMHQMLLWIGLLEILSAPAIVQTFKGETSRAPGDFGFDPLGFSK 184
Query: 500 N----PSFAVNEVKNGRL 541
+ ++ + EVKNGRL
Sbjct: 185 DAKSASTYRLKEVKNGRL 202
[9][TOP]
>UniRef100_Q5K286 Light harvesting protein 2 (Fragment) n=1 Tax=Guillardia theta
RepID=Q5K286_GUITH
Length = 244
Score = 114 bits (284), Expect = 6e-24
Identities = 77/182 (42%), Positives = 101/182 (55%), Gaps = 6/182 (3%)
Frame = +2
Query: 14 FVPSPSAVLRRGAAERVSARPVARSATTVTMRASKSVPFMEVPPALAENPNMPGNVEFDP 193
F P+P+ L AA R + R A S+SVPF++ P L + ++PG+V FDP
Sbjct: 9 FAPAPAGRLSAPAASRAAISRGPRMAV-FEGSFSESVPFLKQPTNL--DGSLPGDVGFDP 65
Query: 194 LNISSYLPIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATAGHDYGVKVGG 373
L S +K ++EAE+KHGRI MLA LG LVQE +TFPF+ + HD VK GG
Sbjct: 66 LGFSEVFDVKVLREAELKHGRIAMLAVLGWLVQESYTFPFFDKVSPI--EAHDLLVKSGG 123
Query: 374 MVHILIGVIIFEALTTPAIVQMINGGDRQPGYFGFDPLKL--GKNPS----FAVNEVKNG 535
M IL+ E A+ Q I G R PG F FDPL L GKN + + + E+K+G
Sbjct: 124 MSQILLWTSFLEIFGGIALFQTIQ-GTRYPGDFSFDPLGLSAGKNEANLEKYQLAEIKHG 182
Query: 536 RL 541
RL
Sbjct: 183 RL 184
[10][TOP]
>UniRef100_Q5K274 Light harvesting protein 6 (Fragment) n=1 Tax=Guillardia theta
RepID=Q5K274_GUITH
Length = 213
Score = 114 bits (284), Expect = 6e-24
Identities = 79/180 (43%), Positives = 107/180 (59%), Gaps = 21/180 (11%)
Frame = +2
Query: 65 SARPVARS--ATTVTMRA-SKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLP----IK 223
SA ARS ++++M+A SK +P++E PPAL + M G+V FDPL +SS LP IK
Sbjct: 5 SAHAPARSNAISSMSMQARSKPLPWLEAPPAL--DGKMEGDVGFDPLWVSSMLPDAGWIK 62
Query: 224 WMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLA--TAGHDY-------GVKVGGM 376
+++EAE+KHGR+ MLA G +VQ+ FTFP A T+ HD G KV M
Sbjct: 63 FLREAELKHGRVAMLAATGAIVQDIFTFPGVDKVIGAAKMTSAHDKYLSLEIGGSKVATM 122
Query: 377 VHILIGVIIFEALTTPAIVQMING-GDRQPGYFGFDPLKLGKN----PSFAVNEVKNGRL 541
+L+ + + E L+ PAIVQ G R PG FGFDPL K+ ++ + EVKNGRL
Sbjct: 123 HQMLLWIGLLEILSDPAIVQTFKGETSRAPGDFGFDPLGFSKDAKSASTYRLKEVKNGRL 182
[11][TOP]
>UniRef100_A8KCP5 Light harvesting complex protein 5 n=1 Tax=Guillardia theta
RepID=A8KCP5_GUITH
Length = 235
Score = 114 bits (284), Expect = 6e-24
Identities = 77/182 (42%), Positives = 101/182 (55%), Gaps = 6/182 (3%)
Frame = +2
Query: 14 FVPSPSAVLRRGAAERVSARPVARSATTVTMRASKSVPFMEVPPALAENPNMPGNVEFDP 193
F P+P+ L AA R + R A S+SVPF++ P L + ++PG+V FDP
Sbjct: 17 FAPAPAGRLSAPAASRAAISRGPRMAV-FEGSFSESVPFLKQPTNL--DGSLPGDVGFDP 73
Query: 194 LNISSYLPIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATAGHDYGVKVGG 373
L S +K ++EAE+KHGRI MLA LG LVQE +TFPF+ + HD VK GG
Sbjct: 74 LGFSEVFDVKVLREAELKHGRIAMLAVLGWLVQESYTFPFFDKVSPI--EAHDLLVKSGG 131
Query: 374 MVHILIGVIIFEALTTPAIVQMINGGDRQPGYFGFDPLKL--GKNPS----FAVNEVKNG 535
M IL+ E A+ Q I G R PG F FDPL L GKN + + + E+K+G
Sbjct: 132 MSQILLWTSFLEIFGGIALFQTIQ-GTRYPGDFSFDPLGLSAGKNEANLEKYQLAEIKHG 190
Query: 536 RL 541
RL
Sbjct: 191 RL 192
[12][TOP]
>UniRef100_A8KCQ1 Light harvesting complex protein 6 n=1 Tax=Guillardia theta
RepID=A8KCQ1_GUITH
Length = 218
Score = 112 bits (281), Expect = 1e-23
Identities = 77/180 (42%), Positives = 102/180 (56%), Gaps = 7/180 (3%)
Frame = +2
Query: 23 SPSAVLRRGAAERVSARPVARSATTVTMRA-SKSVPFMEVPPALAENPNMPGNVEFDPLN 199
SPSA L R ++ R A A M+A SKS+PF++ P AL + + G+V FDPL
Sbjct: 18 SPSAPLTRPSSSRNVA------AVGPRMQAMSKSIPFLKKPAAL--DGTLAGDVGFDPLG 69
Query: 200 ISSYLPIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKN--APHLATAGHDYGVKVGG 373
+SS ++++ EAE+KH R+ MLA LG +VQ+ FTFP T HD VK G
Sbjct: 70 LSSVADVRFLAEAELKHCRLAMLAALGAIVQDIFTFPGVSKVVGSEKMTGVHDILVKQGA 129
Query: 374 MVHILIGVIIFEALTTPAIVQMINGGDRQPGYFGFDPLKLGKNPS----FAVNEVKNGRL 541
M IL+ V E T A+ + ++ G R PG F FDPL GKN +A+ EVKNGRL
Sbjct: 130 MGQILLWVSFLEVFGTLALFETLD-GKRAPGDFKFDPLGFGKNAQTRERYALAEVKNGRL 188
[13][TOP]
>UniRef100_Q9FEM1 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9FEM1_GALSU
Length = 227
Score = 111 bits (278), Expect = 3e-23
Identities = 69/180 (38%), Positives = 104/180 (57%), Gaps = 19/180 (10%)
Frame = +2
Query: 59 RVSARPVARSATTVTM-------------RASKSVPFMEVPPALAENPNMPGNVEFDPLN 199
RV +RP++ TTV R S+++PF++ PP+L + +M G+V FDPL
Sbjct: 24 RVISRPLSSHRTTVVKTFRIIAGSSSTSGRQSRAIPFLKAPPSL--DGSMVGDVGFDPLG 81
Query: 200 ISSYLPIKWMQEAEIKHGRICMLACLGLLVQEFFTFP--FYKNAPHLATAGHDYGVKVGG 373
SS + +++++E+E+KH RI MLA +G +VQEF P + N + G V V G
Sbjct: 82 FSSIIDLRYLRESELKHCRIAMLAVVGFIVQEFIHLPGDVFSNPHPMQAIGQ---VPVAG 138
Query: 374 MVHILIGVIIFEALTTPAIVQMINGGDRQPGYFGFDPLKLGKNPS----FAVNEVKNGRL 541
V I + V I E + AI + + G+R+PGYFGFDPL L K+ + ++E+KNGRL
Sbjct: 139 WVQIFLLVAILEMIDIAAIKETLQ-GNREPGYFGFDPLGLAKDKQAHDRYLLSELKNGRL 197
[14][TOP]
>UniRef100_Q5K258 Lhc7 protein (Fragment) n=1 Tax=Guillardia theta RepID=Q5K258_GUITH
Length = 176
Score = 109 bits (272), Expect = 1e-22
Identities = 66/149 (44%), Positives = 88/149 (59%), Gaps = 6/149 (4%)
Frame = +2
Query: 113 SKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLACLGLLVQ 292
SKS+PF++ P AL + + G+V FDPL +SS ++++ EAE+KH R+ MLA LG +VQ
Sbjct: 1 SKSIPFLKKPAAL--DGTLAGDVGFDPLGLSSVADVRFLAEAELKHCRLAMLAALGAIVQ 58
Query: 293 EFFTFPFYKN--APHLATAGHDYGVKVGGMVHILIGVIIFEALTTPAIVQMINGGDRQPG 466
+ FTFP T HD VK G M IL+ V E T A+ + ++ G R PG
Sbjct: 59 DIFTFPGVSKVVGSEKMTGVHDILVKQGAMGQILLWVSFLEVFGTLALFETLD-GKRAPG 117
Query: 467 YFGFDPLKLGKNPS----FAVNEVKNGRL 541
F FDPL GKN +A+ EVKNGRL
Sbjct: 118 DFKFDPLGFGKNAQTRERYALAEVKNGRL 146
[15][TOP]
>UniRef100_Q5K281 Light harvesting complex protein (Fragment) n=1 Tax=Guillardia
theta RepID=Q5K281_GUITH
Length = 235
Score = 108 bits (269), Expect = 3e-22
Identities = 64/149 (42%), Positives = 86/149 (57%), Gaps = 7/149 (4%)
Frame = +2
Query: 113 SKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLACLGLLVQ 292
SK++PF+ P L + +MPG+V FDPL IS+Y +KWM+EAE+KHGRICMLA G LVQ
Sbjct: 44 SKAMPFLSQPEKL--DGSMPGDVGFDPLGISTYFDLKWMREAELKHGRICMLAWTGCLVQ 101
Query: 293 EFFTFPFYKNAPHLATAGHDYGVKVGGMVHILIGVIIFEALTTP---AIVQMINGGDRQP 463
E P A LA + GGM+ IL+ + + E ++ M R P
Sbjct: 102 EVIHLPESAEAKKLALDAWASAPR-GGMISILVAIGLIEMISNRFQLTATDMFANPARVP 160
Query: 464 GYFGFDPLKLGKNPS----FAVNEVKNGR 538
G GFDPL LG NP+ + ++EV +GR
Sbjct: 161 GDLGFDPLSLGNNPATRAKYELSEVIHGR 189
[16][TOP]
>UniRef100_Q9FDZ6 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9FDZ6_GALSU
Length = 229
Score = 107 bits (267), Expect = 5e-22
Identities = 70/159 (44%), Positives = 94/159 (59%), Gaps = 9/159 (5%)
Frame = +2
Query: 92 TTVTMRASKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLA 271
T V S SVPF+E P L + PG+V FDPL IS L I+W++E+EIKHGRI MLA
Sbjct: 41 TLVANTKSPSVPFLERPQNL--DGTAPGDVGFDPLYISDLLDIQWLRESEIKHGRIAMLA 98
Query: 272 CLGLLVQEFFTFPFYKNAPHLATAGHDYGVKVGGM--VHILIGVIIF---EALTTPAIVQ 436
LG +VQEF P + +A + V GG+ + + IG++ F + TP +
Sbjct: 99 ALGFIVQEFVHLPGQVFSNKVAVDAF-FQVPRGGLWQIFLFIGLLEFVMNKGKMTP--LD 155
Query: 437 MINGGDRQPGYFGFDPLKLGKNPS----FAVNEVKNGRL 541
M + +R+PG FGFDPL LGK+P + V E+KNGRL
Sbjct: 156 MFSDPNRKPGDFGFDPLGLGKDPQTRRRYQVAEIKNGRL 194
[17][TOP]
>UniRef100_A8KCP1 Light harvesting complex protein 4 (Fragment) n=1 Tax=Guillardia
theta RepID=A8KCP1_GUITH
Length = 232
Score = 105 bits (263), Expect = 2e-21
Identities = 63/149 (42%), Positives = 86/149 (57%), Gaps = 7/149 (4%)
Frame = +2
Query: 113 SKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLACLGLLVQ 292
SK++PF+ P L + +MPG+V FDPL IS+Y +KWM+EAE+KHGRICMLA G LVQ
Sbjct: 41 SKAMPFLSQPEKL--DGSMPGDVGFDPLGISTYFDLKWMREAELKHGRICMLAWTGCLVQ 98
Query: 293 EFFTFPFYKNAPHLATAGHDYGVKVGGMVHILIGVIIFEALTTP---AIVQMINGGDRQP 463
E P + LA + GGM+ IL+ + + E ++ M R P
Sbjct: 99 EVIHLPGEAFSKKLALDAWASAPR-GGMISILVAIGLIEMISNRFQLTATDMFANPARVP 157
Query: 464 GYFGFDPLKLGKNPS----FAVNEVKNGR 538
G GFDPL LG NP+ + ++EV +GR
Sbjct: 158 GDLGFDPLSLGNNPATRAKYELSEVIHGR 186
[18][TOP]
>UniRef100_P93450 Light-harvesting complex I polypeptide n=1 Tax=Porphyridium
purpureum RepID=P93450_PORCR
Length = 203
Score = 105 bits (262), Expect = 2e-21
Identities = 70/176 (39%), Positives = 101/176 (57%), Gaps = 8/176 (4%)
Frame = +2
Query: 38 LRRGAAERVSARPVARSATTVTMRASKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLP 217
L R +A R S +++A M SK++PF+E P L + + G+V FDPL +S+ L
Sbjct: 10 LARASAGRSSV--CSKNAHVTMMAKSKAIPFLEAPAKL--DGTLVGDVGFDPLGLSATLD 65
Query: 218 IKWMQEAEIKHGRICMLACLGLLVQEFF----TFPFYKNAPHLATAGHDYGVKVGGMVHI 385
+K+++ AE+KHGRI MLA LG +VQE + PF + P LA Y V V G I
Sbjct: 66 VKYLRAAELKHGRIAMLAALGFVVQEILAPKQSGPFTEPDPFLAI----YKVPVEGWYQI 121
Query: 386 LIGVIIFEALTTPAIVQMINGGDRQPGYFGFDPLKLGKNPS----FAVNEVKNGRL 541
+ + + E +T + G +PG FGFDPL LGK+ S +A++E+KNGRL
Sbjct: 122 IAAISLVELVT----FKENYDGSAEPGNFGFDPLGLGKDKSVFDKYALSELKNGRL 173
[19][TOP]
>UniRef100_A8KCR3 Light harvesting complex protein 9 n=1 Tax=Guillardia theta
RepID=A8KCR3_GUITH
Length = 220
Score = 103 bits (257), Expect = 8e-21
Identities = 63/149 (42%), Positives = 83/149 (55%), Gaps = 6/149 (4%)
Frame = +2
Query: 113 SKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLACLGLLVQ 292
S+SVPF+ P AL + M G+V FDP SS IKW++E+E+KHGR+CMLA LG +VQ
Sbjct: 42 SQSVPFLPRPAAL--DGKMVGDVGFDPFGFSSKYDIKWLRESELKHGRVCMLASLGYIVQ 99
Query: 293 EFFTFPFYKNAPHLATAGHDYGVKVGGM--VHILIGVIIFEALTTPAIVQMINGGDRQPG 466
EF PF + + + Y V GG+ + IG I + + R PG
Sbjct: 100 EFVHLPFEATSNPVGSEAF-YQVPAGGLWQIFAFIGAIEHFSHNFKMSGSTMFSDGRTPG 158
Query: 467 YFGFDPLKLGKNPS----FAVNEVKNGRL 541
FGFDPL GKNP + + E+KNGRL
Sbjct: 159 NFGFDPLGFGKNPQARARYELAELKNGRL 187
[20][TOP]
>UniRef100_B7FQE1 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FQE1_PHATR
Length = 215
Score = 103 bits (256), Expect = 1e-20
Identities = 61/153 (39%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
Frame = +2
Query: 110 ASKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLACLGLLV 289
AS+S+PFME PP L G+ FDP S +LP+ +++EAE+KHGRICM+A G
Sbjct: 44 ASESLPFMEYPPNLK---GYVGDAGFDPFRFSDFLPMDFLREAELKHGRICMMATAGFAA 100
Query: 290 QEFF--TFPFYKNAPHLATA-GHDYGVKVGGMVHILIGVIIFEALTTPAIVQMINGGDRQ 460
+ +P + L + HD VK GGM +L+ E T A++QM+NG R+
Sbjct: 101 VDLGLRVYPLPEGYEGLTSVTAHDALVKQGGMGQMLLWFSFLEIFDTVAVIQMLNGSGRR 160
Query: 461 PGYFGFDPLKLGKN------PSFAVNEVKNGRL 541
PG FGFDP KN + E+ NGRL
Sbjct: 161 PGDFGFDPAGFLKNADAKKEEDMMLKELTNGRL 193
[21][TOP]
>UniRef100_Q9FEM0 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9FEM0_GALSU
Length = 219
Score = 102 bits (255), Expect = 1e-20
Identities = 65/152 (42%), Positives = 87/152 (57%), Gaps = 5/152 (3%)
Frame = +2
Query: 101 TMRASKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLACLG 280
T R SK++PF P L E+ MPG FDPL S +K++QEAEIKH RICMLA LG
Sbjct: 40 TQRMSKAIPFFPKPERLDES--MPGYAGFDPLGFSDKFDVKFLQEAEIKHCRICMLAALG 97
Query: 281 LLVQEFFTFP--FYKNAPHLATAGHDYGVKVGGMVHILIGVIIFEALTTPAIVQMINGGD 454
+ EF+ P + N LA G V G++ IL+ V+ EA+ ++ ++ +
Sbjct: 98 WVFPEFWHLPSEVFSNTSPLAALGQ---VPKFGLIQILLLVVALEAI---SLDKLEFHPE 151
Query: 455 RQPGYFGFDPLKLGKNPS---FAVNEVKNGRL 541
++PG FGFDPL LGK S E+KNGRL
Sbjct: 152 KEPGDFGFDPLGLGKGKSKKWMQTAEIKNGRL 183
[22][TOP]
>UniRef100_Q7XY91 Light-harvest protein (Fragment) n=1 Tax=Griffithsia japonica
RepID=Q7XY91_GRIJA
Length = 120
Score = 101 bits (252), Expect = 3e-20
Identities = 53/88 (60%), Positives = 62/88 (70%), Gaps = 5/88 (5%)
Frame = +2
Query: 293 EFFTFPFYKNAPHLATAGHDYGVKVGGMVHILIGVIIFEALTTPAIVQMING-GDRQPGY 469
E +TFPFY APHLA HD+GV+ G M IL+ FE +T PA+VQM+NG GDR PG
Sbjct: 1 ELYTFPFYSGAPHLAINRHDWGVENGSMKQILLWCSFFEIMTMPALVQMLNGQGDRVPGD 60
Query: 470 FGFDPLKLGKNPS----FAVNEVKNGRL 541
F FDPL LGK+P+ F VNEVKNGRL
Sbjct: 61 FCFDPLGLGKDPAKLAVFKVNEVKNGRL 88
[23][TOP]
>UniRef100_Q5K269 Light harvesting protein 7 (Fragment) n=1 Tax=Guillardia theta
RepID=Q5K269_GUITH
Length = 203
Score = 101 bits (251), Expect = 4e-20
Identities = 59/147 (40%), Positives = 83/147 (56%), Gaps = 4/147 (2%)
Frame = +2
Query: 113 SKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLACLGLLVQ 292
S+++PF+E P L + +MPG FDPL S Y +KW+QEAEIKHGRICMLA +G+
Sbjct: 27 SEAIPFLEKPKKL--DSSMPGYAGFDPLGFSDYYDVKWLQEAEIKHGRICMLAVVGMFHP 84
Query: 293 EFFTFPFYKNAPHLATAGHDYGVKVGGMVHILIGVIIFEALTTPAIVQMINGGDRQPGYF 472
E P + + Y + G + I + + I E+ + + + D+ PG
Sbjct: 85 EIAKLPQFASFSTNPLEAF-YQLSFAGWLQIFVFIGICESFS----FEKVYYTDKAPGDL 139
Query: 473 GFDPLKLGKNPS----FAVNEVKNGRL 541
GFDPL+LG NP+ +A EVKNGRL
Sbjct: 140 GFDPLRLGSNPASRKYYANAEVKNGRL 166
[24][TOP]
>UniRef100_A8KCN9 Light harvesting complex protein 3 n=1 Tax=Guillardia theta
RepID=A8KCN9_GUITH
Length = 218
Score = 101 bits (251), Expect = 4e-20
Identities = 59/147 (40%), Positives = 83/147 (56%), Gaps = 4/147 (2%)
Frame = +2
Query: 113 SKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLACLGLLVQ 292
S+++PF+E P L + +MPG FDPL S Y +KW+QEAEIKHGRICMLA +G+
Sbjct: 42 SEAIPFLEKPKKL--DSSMPGYAGFDPLGFSDYYDVKWLQEAEIKHGRICMLAVVGMFHP 99
Query: 293 EFFTFPFYKNAPHLATAGHDYGVKVGGMVHILIGVIIFEALTTPAIVQMINGGDRQPGYF 472
E P + + Y + G + I + + I E+ + + + D+ PG
Sbjct: 100 EIAKLPQFASFSTNPLEAF-YQLSFAGWLQIFVFIGICESFS----FEKVYYTDKAPGDL 154
Query: 473 GFDPLKLGKNPS----FAVNEVKNGRL 541
GFDPL+LG NP+ +A EVKNGRL
Sbjct: 155 GFDPLRLGSNPASRKYYANAEVKNGRL 181
[25][TOP]
>UniRef100_A8KCN4 Light harvesting complex protein 2 n=1 Tax=Guillardia theta
RepID=A8KCN4_GUITH
Length = 215
Score = 97.8 bits (242), Expect = 4e-19
Identities = 67/165 (40%), Positives = 87/165 (52%), Gaps = 11/165 (6%)
Frame = +2
Query: 80 ARSATTVTMRASKS--VPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEIKHG 253
ARS+T +S VPF+ PPAL + M G+V FDPL S+Y +KW++EAE+KHG
Sbjct: 27 ARSSTQGLKMQDRSYAVPFLSRPPAL--DGTMAGDVGFDPLGFSNYFDLKWLREAELKHG 84
Query: 254 RICMLACLGLLVQEFFTFPFYKNAPHLATAGHDYGVKVGGMVHILIGVIIFEALTTPAIV 433
R+CML LG LVQE F P L + V GG+ I + E L+
Sbjct: 85 RVCMLGTLGFLVQEKFQLPLPGFGEKLPIEAF-FTVPTGGLWQIFFTLGAIEILSNNG-- 141
Query: 434 QMINGGD-----RQPGYFGFDPLKLGKNPS----FAVNEVKNGRL 541
I+ GD R PG GFDPL L + S F + E+K+GRL
Sbjct: 142 -RISPGDMFADGRAPGDLGFDPLNLSSDESALRRFELAELKHGRL 185
[26][TOP]
>UniRef100_A8KCQ6 Light harvesting complex protein 7 (Fragment) n=1 Tax=Guillardia
theta RepID=A8KCQ6_GUITH
Length = 198
Score = 97.4 bits (241), Expect = 6e-19
Identities = 59/148 (39%), Positives = 86/148 (58%), Gaps = 5/148 (3%)
Frame = +2
Query: 113 SKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLACLGLLVQ 292
S +VPF++ P L + + G+V FDPL S ++ ++EAE+KHGR MLA LG +VQ
Sbjct: 27 SAAVPFLKRPSNL--DGSYVGDVGFDPLGFSDVFDLRVLREAELKHGRFAMLAVLGFIVQ 84
Query: 293 EFFTFPFY-KNAPHLATAGHDYGVKVGGMVHILIGVIIFEALTTPAIVQMINGGDRQPGY 469
E +TFPF+ K AP HDY V+ GG I+ + E A+ + + G R+PG
Sbjct: 85 ELYTFPFFPKMAP---VDAHDYFVQQGGGSQIIFWISFVEIFGVVALFETLQ-GKREPGD 140
Query: 470 FGFDPLKLGKNPS----FAVNEVKNGRL 541
F FDPL L K+ + + + E+K+ RL
Sbjct: 141 FAFDPLGLAKDEATLERYRLAEIKHSRL 168
[27][TOP]
>UniRef100_Q2IA65 Chloroplast light harvesting protein isoform 14 n=1 Tax=Isochrysis
galbana RepID=Q2IA65_ISOGA
Length = 193
Score = 94.4 bits (233), Expect = 5e-18
Identities = 57/130 (43%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
Frame = +2
Query: 104 MRASKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLACLG- 280
M S+++PF+E P L + +M G+ FDPLN++ + +M+EAE+KHGRICMLA +G
Sbjct: 29 MIKSQALPFLEAPAKL--DGSMAGDRGFDPLNLAGSFNLNYMREAELKHGRICMLAWVGY 86
Query: 281 LLVQEFFTFPFYKNAPHLAT-AGHDYGVKVGGMVHILIGVIIFEALTTPAIVQMING-GD 454
+ V F PF APH+++ A HD VK G M+ +L V + EAL+ A+ +M++G D
Sbjct: 87 VAVDNGFYVPF---APHVSSLAAHDTAVKSGNMLLLLGAVGVIEALSYNAVNEMMSGQTD 143
Query: 455 RQPGYFGFDP 484
R+PG F DP
Sbjct: 144 RRPGDFSMDP 153
[28][TOP]
>UniRef100_B8C0K3 Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8C0K3_THAPS
Length = 203
Score = 94.4 bits (233), Expect = 5e-18
Identities = 54/148 (36%), Positives = 78/148 (52%), Gaps = 3/148 (2%)
Frame = +2
Query: 47 GAAERVSARPVARSATTVTMRASKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKW 226
G+ +A A T S S+PF+E PP L G++ FDP S ++PI +
Sbjct: 12 GSTSAFTAPSTGARAVTSLAEKSASLPFLEAPPNLDGGV---GDLGFDPFRFSDFVPIDF 68
Query: 227 MQEAEIKHGRICMLACLGLLVQE--FFTFPFYKNAPHLAT-AGHDYGVKVGGMVHILIGV 397
++EAE+KHGRICM+A LG + + F +P + L + HD V+ GGM +L+
Sbjct: 69 LREAELKHGRICMMAWLGFVAVDMGFRVYPAAEGFESLTSITAHDAAVEQGGMSQMLLWF 128
Query: 398 IIFEALTTPAIVQMINGGDRQPGYFGFD 481
+ E T A+ QM+ G R PG FG D
Sbjct: 129 SLLEVFDTIAVQQMLEGSGRAPGDFGLD 156
[29][TOP]
>UniRef100_B7FUM6 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FUM6_PHATR
Length = 200
Score = 94.4 bits (233), Expect = 5e-18
Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 9/180 (5%)
Frame = +2
Query: 29 SAVLRRGAAERVSARPVARSATTVTMRASKSVPFMEVPPALAENPNMPGNVEFDPLNISS 208
+++L AA +A+P A S + + SKS+PF+ P G+V FDPL S
Sbjct: 7 ASLLASAAAFAPAAKPAA-STSALNAEMSKSMPFLTAPK---NTGGYVGDVGFDPLGFSD 62
Query: 209 YLPIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATAGHDYGVKVGGMVHIL 388
+KW++E+EIKHGR MLA +G ++Q+F+T P + A G + M+ I+
Sbjct: 63 NFDMKWLRESEIKHGRAAMLATVGFVMQQFWTLPGMVHVDDSNLAPGAAG--ISPMLQIV 120
Query: 389 IGVIIFEALTTPAIV---QMINGGDRQPGYFGFDPLKLGKNPS------FAVNEVKNGRL 541
G+ E T V M + R+PG GFDP+ + KN S + E+KNGRL
Sbjct: 121 FGMGALEWWTNKGKVTMEDMFSDSSREPGNLGFDPMGMSKNKSKEEAEAMQLKEIKNGRL 180
[30][TOP]
>UniRef100_Q7XY90 Light-harvest protein n=1 Tax=Griffithsia japonica
RepID=Q7XY90_GRIJA
Length = 213
Score = 93.6 bits (231), Expect = 8e-18
Identities = 67/186 (36%), Positives = 96/186 (51%), Gaps = 7/186 (3%)
Frame = +2
Query: 5 VGTFVPSPSAVLRRG-AAERVSARPVARSATTVTM-RASKSVPFMEVPPALAENPNMPGN 178
+ FVP+ + R +S P A + TV+M S SVPF++ P L + + G
Sbjct: 1 MNAFVPTLPLLSRSSLGGASLSVAPRASAPATVSMSERSASVPFLKKPENLPDT--LIGY 58
Query: 179 VEFDPLNISSYLPIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATAGHDYG 358
FDPLN + + +WMQEAEIKHGR+ MLA LG+LVQEF P LAT +
Sbjct: 59 TGFDPLNFTGRVDYRWMQEAEIKHGRVSMLAVLGMLVQEFIHLPAKGFENPLATEAF-FQ 117
Query: 359 VKVGGMVHILI-----GVIIFEALTTPAIVQMINGGDRQPGYFGFDPLKLGKNPSFAVNE 523
V G+ I + + + + +P+ M + G PG GF+P+ L + S + E
Sbjct: 118 VPSAGLFQIFLFCGFAELYLHKGKLSPS--DMFSDG-ATPGELGFNPMNLDVSDSLRLKE 174
Query: 524 VKNGRL 541
+KNGRL
Sbjct: 175 IKNGRL 180
[31][TOP]
>UniRef100_Q7X8N6 Light-harvest protein n=1 Tax=Griffithsia japonica
RepID=Q7X8N6_GRIJA
Length = 217
Score = 92.0 bits (227), Expect = 2e-17
Identities = 70/190 (36%), Positives = 99/190 (52%), Gaps = 11/190 (5%)
Frame = +2
Query: 5 VGTFVPSPSAVLRR--------GAAERVSARPVARSATTVTMRASKSVPFMEVPPALAEN 160
+ FVP+ S R GAA + P A SA +++ S SVPF+ P L+E+
Sbjct: 1 MAAFVPALSLAARPTLSRSALCGAAVSAAVAP-APSAVSMS-DLSPSVPFLPKPKNLSED 58
Query: 161 PNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLAT 340
M G FDPL +S+ + IKW+QE+EIKHGR+CMLA G+L QEF P + A LAT
Sbjct: 59 --MVGYTGFDPLGLSNLVDIKWLQESEIKHGRVCMLAVAGILAQEFVHLPDPRYANPLAT 116
Query: 341 AGHDYGVKVGGMVHILIGVIIFEALTTP---AIVQMINGGDRQPGYFGFDPLKLGKNPSF 511
+ V + I + + E + + V M + G PG GF+P+ L +
Sbjct: 117 EALNQ-VPSAALWQIFLFCGLAEFVLHKGKISYVDMFSDG-AVPGELGFNPMNLKISDDM 174
Query: 512 AVNEVKNGRL 541
+ E+KNGRL
Sbjct: 175 KLKEIKNGRL 184
[32][TOP]
>UniRef100_Q2IA66 Chloroplast light harvesting protein isoform 13 n=1 Tax=Isochrysis
galbana RepID=Q2IA66_ISOGA
Length = 211
Score = 89.7 bits (221), Expect = 1e-16
Identities = 62/176 (35%), Positives = 85/176 (48%), Gaps = 16/176 (9%)
Frame = +2
Query: 62 VSARPVARSATTVTMRA---------SKSVPFMEVPPALAENPNMPG-NVEFDPLNISSY 211
+S P A A VT + SK+VPF+ PP ++ + G FDPL +S Y
Sbjct: 10 LSFSPAAMPAVQVTRSSGVNMAIANPSKAVPFLSAPPC--QSSKLAGAETGFDPLYLSEY 67
Query: 212 LPIKWMQEAEIKHGRICMLACLGLLVQEFFTFP-FYKNAPHLATAGHDYGVKVGGMVHIL 388
+ IKW +EAE+KHGRICMLA G QEF P F P+ A + + +
Sbjct: 68 IDIKWAREAELKHGRICMLAATGYFFQEFLALPGFPGYTPNGIEAATSVSPESLAQIVLF 127
Query: 389 IGVIIFEA-LTTPAIVQMINGGDRQPGYFGFDPLKLGKNPS----FAVNEVKNGRL 541
+ V+ + + L M R+PG GFDPL G N + + E+KNGRL
Sbjct: 128 MSVVEYNSNLNKWTQDTMFTDPKREPGNLGFDPLHFGDNKASRARLEMAELKNGRL 183
[33][TOP]
>UniRef100_P93449 Light-harvesting complex I polypeptide n=1 Tax=Porphyridium
purpureum RepID=P93449_PORCR
Length = 222
Score = 89.4 bits (220), Expect = 2e-16
Identities = 61/167 (36%), Positives = 89/167 (53%), Gaps = 8/167 (4%)
Frame = +2
Query: 65 SARPVARSATTVTMRASKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEI 244
+A PV + SKS+PF+E P L + +M G+V FDPL S +K+++EAE+
Sbjct: 28 AAVPVKAGRIAMMAEMSKSIPFLEKPKNL--DGSMAGDVGFDPLGFSDKWDVKFLREAEL 85
Query: 245 KHGRICMLACLGLLVQEFF---TFP-----FYKNAPHLATAGHDYGVKVGGMVHILIGVI 400
KHGRICMLA LG + E + P F + P A + G++ I++ V+
Sbjct: 86 KHGRICMLAALGFIYPEIMGGKSIPSPEGYFTELNPLKAVK----AIPTAGLLQIVLFVM 141
Query: 401 IFEALTTPAIVQMINGGDRQPGYFGFDPLKLGKNPSFAVNEVKNGRL 541
+ EA++ + PG F FDPL L K+P ++EVKNGRL
Sbjct: 142 VLEAISWNKVFM---DKTSAPGDFKFDPLGL-KSPKMELSEVKNGRL 184
[34][TOP]
>UniRef100_B7G9B9 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G9B9_PHATR
Length = 216
Score = 89.4 bits (220), Expect = 2e-16
Identities = 65/183 (35%), Positives = 96/183 (52%), Gaps = 12/183 (6%)
Frame = +2
Query: 29 SAVLRRGAAERVSARPVARSATTVTMRASKSVPFMEVPPALAENPNMPGNVEFDPLNISS 208
+A L A+ A+ R T++ SKS+PFM P L + +M G+V FDPL +S+
Sbjct: 8 TATLAASASAFAPAQSNTRVVTSLNAERSKSLPFMNRPDLL--DGSMAGDVGFDPLGLST 65
Query: 209 Y----LPIKWMQEAEIKHGRICMLACLGLL-VQEFFTFPFYKNAPHLATAGHDYGVKVGG 373
+ + W++EAEIKH R+ M+A G+L V+ F P + A + + +
Sbjct: 66 IEGVGVDLYWLREAEIKHCRVAMMAVAGVLWVELFGPAPGCEMATAKSQTDAFWQLWQAH 125
Query: 374 MVHILIGVI---IFEALTTPAIVQMINGGDRQPGYFGFDPLKLGKNPS----FAVNEVKN 532
+I G I + E +T AI G R PG FG DPLK+ NP+ +++NEVKN
Sbjct: 126 PQYIAFGFIMTGLVEMITGIAITTGRESGQRAPGDFGLDPLKIKNNPAKWEKYSLNEVKN 185
Query: 533 GRL 541
GRL
Sbjct: 186 GRL 188
[35][TOP]
>UniRef100_Q5K250 Light harvesting complex 8 (Fragment) n=1 Tax=Guillardia theta
RepID=Q5K250_GUITH
Length = 155
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/119 (41%), Positives = 72/119 (60%), Gaps = 7/119 (5%)
Frame = +2
Query: 206 SYLPIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATAG--HDYGVKVGGMV 379
++L + W +EAEIKHGR+ MLA G++VQ+ + FP + A H+ V+ G M
Sbjct: 1 NWLNLYWAREAEIKHGRVAMLAATGMIVQDLYKFPGVQKTFGDAAMMKLHNLAVEQGAMQ 60
Query: 380 HILIGVIIFEALT-TPAIVQMINGGDRQPGYFGFDPLKLGKNPSF----AVNEVKNGRL 541
+L+ + + E LT PA++Q + G +R PG FGFDPL G+NP + E+KNGRL
Sbjct: 61 QLLLWLGLLEILTGLPAVIQGLKGSERTPGDFGFDPLGCGRNPETLARRQLTELKNGRL 119
[36][TOP]
>UniRef100_Q7XY92 Light-harvest protein (Fragment) n=1 Tax=Griffithsia japonica
RepID=Q7XY92_GRIJA
Length = 206
Score = 88.6 bits (218), Expect = 3e-16
Identities = 61/178 (34%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Frame = +2
Query: 35 VLRRGAAERVSARPVARSATTVTMRASKSVPFMEVPPALAENPNMPGNVEFDPLNISSYL 214
+ R A +R A + +M AS SVPF+E PP L + ++PG+V FDP S+
Sbjct: 4 IARTAFAGAAVSRAAAPAKARFSMDASASVPFLERPPKL--DGSLPGDVGFDPCGFSNAF 61
Query: 215 PIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATAGHDYGVKVGG-----MV 379
+ +++EAE+KHGRICMLA LG + E + P+ A + + VG ++
Sbjct: 62 ELNFLREAELKHGRICMLAILGWVFPE-----LVGHLPNEAYSATNPLYAVGSVGWLPII 116
Query: 380 HILIGVIIFEALTTPAIVQMINGGDRQPGYFGFDPLKLGKNPS----FAVNEVKNGRL 541
IL + I EA + ++ + PG +GFDP L NP + + E+KNGRL
Sbjct: 117 QILAFIAICEA---KGVAKVYDENCANPGNYGFDPFGLTANPKTKQHYELAEIKNGRL 171
[37][TOP]
>UniRef100_Q7XYZ2 Light-harvesting complex I polypeptide (Fragment) n=1
Tax=Griffithsia japonica RepID=Q7XYZ2_GRIJA
Length = 168
Score = 87.8 bits (216), Expect = 4e-16
Identities = 63/154 (40%), Positives = 81/154 (52%), Gaps = 6/154 (3%)
Frame = +2
Query: 98 VTMRASKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLACL 277
V M AS+SVPF+E P L + G+ FDPL +S Y+ + + AEIKHGRICMLA L
Sbjct: 1 VRMAASESVPFLEKPSKL--DGTRVGDTGFDPLYLSDYIDLDYAAAAEIKHGRICMLATL 58
Query: 278 GLLVQEFFTFP---FYKNAPHLATAGHDYGVKVGGMVHILIGVIIFEALTTPAIVQMING 448
G+LVQE P F + P A Y V + G V I+ + + E + A + G
Sbjct: 59 GMLVQEVVHLPNAAFSEPNPLKAI----YAVPIEGWVQIITVICLVELASFKATYE--TG 112
Query: 449 GDRQPGYFGFDPLKLG---KNPSFAVNEVKNGRL 541
D GFDP+ LG K + EVKNGRL
Sbjct: 113 AD-----LGFDPMGLGTPDKIEELKLKEVKNGRL 141
[38][TOP]
>UniRef100_B8C8Q0 Fucoxanthin chl a/c light-harvesting protein, lhcr type n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C8Q0_THAPS
Length = 204
Score = 87.0 bits (214), Expect = 8e-16
Identities = 59/164 (35%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Frame = +2
Query: 83 RSATTVTMRASKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRIC 262
++AT + SK++PF+ P A + G+ FDPL S IKW+QE+EIKHGR+
Sbjct: 24 KAATALNAEMSKAMPFLINP---ANTDGLIGSNGFDPLGFSDTFDIKWLQESEIKHGRVA 80
Query: 263 MLACLGLLVQEFFTFPFYKNAPHLATAGHDYGVKVGGMVHILIGVIIFEALTTPAIV--- 433
MLA G + +F FP Y + + V + M+ I+ + E T V
Sbjct: 81 MLASAGFIASQFVNFPMYSSMHVDDSNMAPTVVGISAMLQIVCAAGVEEWRTYKGQVTME 140
Query: 434 QMING--GDRQPGYFGFDPLKLGKNPSFA------VNEVKNGRL 541
M G DR PG FGFDP+ K S A + E+KNGRL
Sbjct: 141 DMFTGDMADRTPGDFGFDPMGQLKGKSEAAVNEMKLKEIKNGRL 184
[39][TOP]
>UniRef100_B7FQE0 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FQE0_PHATR
Length = 202
Score = 85.9 bits (211), Expect = 2e-15
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 5/176 (2%)
Frame = +2
Query: 29 SAVLRRGAAERVSARPVARSATTVTMRASKSVPFMEVPPALAENPNMPGNVEFDPLNISS 208
+++L AA +++ +++ + S ++PF+ P L + ++ FDPL S
Sbjct: 7 ASMLSAAAAFAPASQGAGKASVALNAEKSPAMPFLPYPENL--KGYIGDDIGFDPLGFSD 64
Query: 209 YLPIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATAGHDYGVKVGGMVHIL 388
Y P+ +++E+EIKHGRICMLA +G + + + + HD ++ G M + L
Sbjct: 65 YFPMDYLRESEIKHGRICMLAVVGYIATDLGIIVHPYGSGLTSATAHDALLEKGVMGNAL 124
Query: 389 IGVIIFEALTTPAIVQMINGGDRQPGYFGFDPLKL-GKN----PSFAVNEVKNGRL 541
I + E ++ A +M+ G R+PGYFGF L GK+ E+ NGRL
Sbjct: 125 IWIGALEMVSYIATAEMLQGSGREPGYFGFGTKYLDGKSAEQIKKIKYQEIMNGRL 180
[40][TOP]
>UniRef100_B3VBH6 Light harvesting complex protein (Fragment) n=1 Tax=Vaucheria
litorea RepID=B3VBH6_VAULI
Length = 105
Score = 85.5 bits (210), Expect = 2e-15
Identities = 49/103 (47%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Frame = +2
Query: 248 HGRICMLACLGLLVQEF-FTFPFYKNAPHLATAGHDYGVKVGGMVHILIGVIIFEALTTP 424
HGRICMLA G +V + P + TA HD V+ G M IL+ V +FEA+++
Sbjct: 1 HGRICMLAVAGWIVVDLGLHLPGDVHLVDSLTA-HDNAVRFGAMSQILLWVSMFEAVSSV 59
Query: 425 AIVQMINGGDRQPGYFGFDPLKLGKNPS----FAVNEVKNGRL 541
A+ QM+NG R+PG FGFDPLK +PS A+NE+KNGRL
Sbjct: 60 AVFQMLNGSGRKPGEFGFDPLKFASDPSKRAKLALNEIKNGRL 102
[41][TOP]
>UniRef100_Q9LKN7 Light-harvesting complex protein LHCC13 n=1 Tax=Guillardia theta
RepID=Q9LKN7_GUITH
Length = 238
Score = 84.0 bits (206), Expect = 6e-15
Identities = 52/108 (48%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Frame = +2
Query: 224 WMQEAEIKHGRICMLACLGLLVQEFFTFPFYKN--APHLATAGHDYGVKVGGMVHILIGV 397
W +EAE+KHGRI MLA GL+VQ+ FTFPFY A HD VKVG +L+ +
Sbjct: 73 WAREAEVKHGRIAMLAATGLIVQDLFTFPFYSKWYTGEKVWALHDKLVKVGAAWQVLLFL 132
Query: 398 IIFEALTTPAIVQMINGGDRQPGYFGFDPLKLGKNPSFAVNEVKNGRL 541
AL P I + I+G G +GFDPL L K+ AV E+KNGRL
Sbjct: 133 F---ALEIPFIQKAIDGTLDGTGDYGFDPLGL-KSDRRAVTEIKNGRL 176
[42][TOP]
>UniRef100_Q2IA67 Chloroplast light harvesting protein isoform 12 n=1 Tax=Isochrysis
galbana RepID=Q2IA67_ISOGA
Length = 231
Score = 80.5 bits (197), Expect = 7e-14
Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Frame = +2
Query: 113 SKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLACLGLLVQ 292
S+S+PF+ L G++ FDP+ S LP+ W++EAE+KH R+ MLA +G +
Sbjct: 68 SQSMPFLVKRKTL---DGYVGDIGFDPVGFSEILPMDWLREAELKHCRVAMLATVGFVFT 124
Query: 293 EFFTFPFYKNAPHLATAGHDYGVKVGGMVHILIGVIIFEALTTPAIVQMINGGDRQPGYF 472
+FF + HD V G M +L+ + + E I Q + G R G F
Sbjct: 125 DFFHISGF---DFTTLEAHDACVASGAMSQLLLWLGLLEVFGFIGIDQTLRGSGRAAGDF 181
Query: 473 GFDPLKLGKNP----SFAVNEVKNGRL 541
FDPL G +P + + E+ NGRL
Sbjct: 182 SFDPLGFGSDPAKMATLQMKELANGRL 208
[43][TOP]
>UniRef100_B8C0K4 Fucoxanthin chlorophyll a/c light-harvesting protein, lhcr type n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C0K4_THAPS
Length = 203
Score = 80.5 bits (197), Expect = 7e-14
Identities = 52/160 (32%), Positives = 85/160 (53%), Gaps = 8/160 (5%)
Frame = +2
Query: 83 RSATTVTMRA-SKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRI 259
R+AT++ A SK++P++ P L G FDPL IS Y P+ ++ E+EIKHGR+
Sbjct: 24 RAATSLEASAKSKALPWLPNPSNLDGRIGANG---FDPLGISEYFPVDYLVESEIKHGRV 80
Query: 260 CMLACLGLLVQEFFT--FPFYKNAPHLATA-GHDYGVKVGGMVHILIGVIIFEALTTPAI 430
CM+A G + + +P ++ + +A HD V G M ++ I + +FE + +
Sbjct: 81 CMMAWAGYVAVDLGARIYPLPESMQGVTSATAHDPAVAFGSMGNMFIWIALFEMVGWIGL 140
Query: 431 VQMINGGDRQPGYFGFDPLKLGKN----PSFAVNEVKNGR 538
Q + G R+PG FG+ +GK + + E+ NGR
Sbjct: 141 SQTLQGSGREPGDFGWGKQFMGKTQAEIDTMKLKELTNGR 180
[44][TOP]
>UniRef100_Q53IY4 Light-harvesting complex protein Lhcc2 n=1 Tax=Rhodomonas sp. CS24
RepID=Q53IY4_RHDS2
Length = 224
Score = 80.1 bits (196), Expect = 9e-14
Identities = 51/116 (43%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Frame = +2
Query: 218 IKWMQEAEIKHGRICMLACLGLLVQEFFTFPF----YKNAPHLATAGHDYGVKVGGMVHI 385
I W +EAE+KHGRICMLA G LVQ+ +TFPF YK H+ +K G M +
Sbjct: 71 IVWAREAEVKHGRICMLAATGSLVQDLYTFPFMSKWYKGEKMWGL--HEAAIKSGAMWQV 128
Query: 386 LIGVIIFEALTTPAIVQMINGGDRQPGYFGFDPLKLGKNP-SFA---VNEVKNGRL 541
L V + E P ++++ NG G GFDPL L +P +FA V E+KNGRL
Sbjct: 129 LFFVGLLE---IPFMLKLANGSVDGTGDLGFDPLGLKNDPETFARRQVTEIKNGRL 181
[45][TOP]
>UniRef100_Q53IY6 Light-harvesting complex protein Lhcc4 n=1 Tax=Rhodomonas sp. CS24
RepID=Q53IY6_RHDS2
Length = 238
Score = 79.7 bits (195), Expect = 1e-13
Identities = 50/108 (46%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Frame = +2
Query: 224 WMQEAEIKHGRICMLACLGLLVQEFFTFPFYKN--APHLATAGHDYGVKVGGMVHILIGV 397
W +EAE+KHGRI MLA GL+VQ+ FT PFY A HD V VG +L+ +
Sbjct: 73 WAREAEVKHGRIAMLAATGLIVQDLFTLPFYGKWYTGEKVWALHDKLVSVGAAWQVLLAI 132
Query: 398 IIFEALTTPAIVQMINGGDRQPGYFGFDPLKLGKNPSFAVNEVKNGRL 541
AL P I + I G G +GFDPL L K+ AV E+KNGRL
Sbjct: 133 ---GALEFPFINKCIEGTLDGTGDYGFDPLSL-KSDRRAVTEIKNGRL 176
[46][TOP]
>UniRef100_B7G502 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G502_PHATR
Length = 206
Score = 79.3 bits (194), Expect = 2e-13
Identities = 52/134 (38%), Positives = 71/134 (52%), Gaps = 11/134 (8%)
Frame = +2
Query: 173 GNVEFDPLNISSYLP--IKWMQEAEIKHGRICMLACLGLLVQEFFTFP----FYKNAPHL 334
G+ FDPL ++ +P + W +E+E+KHGR MLA G +V EF P + P++
Sbjct: 55 GSKNFDPLGLTEKVPEWVPWFRESELKHGRAAMLAVAGFVVPEFVRVPGEAYSFAAIPNV 114
Query: 335 ATAGHDYGVKVGGMVHILIGVIIFEALTTPAIVQMINGGDRQPGYFGFDPLKL-----GK 499
A HD M+ I + EA++ PA+ M N DR PG FGFDPLKL K
Sbjct: 115 IDA-HD--ALPQAMIQIFAWISFVEAVSFPALANM-NEFDRVPGDFGFDPLKLYPKDAAK 170
Query: 500 NPSFAVNEVKNGRL 541
+ E+KNGRL
Sbjct: 171 QEQMQLKELKNGRL 184
[47][TOP]
>UniRef100_Q5ENN0 Chloroplast light harvesting complex protein n=1 Tax=Heterocapsa
triquetra RepID=Q5ENN0_HETTR
Length = 478
Score = 78.2 bits (191), Expect = 4e-13
Identities = 48/127 (37%), Positives = 70/127 (55%), Gaps = 8/127 (6%)
Frame = +2
Query: 185 FDPLNISSYLPIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAP---HLATAGHDY 355
FD N+ +Y ++++E+EIKHGR+CMLA +G++VQ P Y P + +A +
Sbjct: 136 FDFNNVMTYPHAQYLRESEIKHGRVCMLAFVGIVVQSIVQIPGYPQEPDWLNALSACYAS 195
Query: 356 GVKVGGMVHILIGVIIFEALTTPAIVQMINGGDRQPGYFGFDPLKLGKNPSF-----AVN 520
V G+V + + ++ E P I DR+PG GFDPLKL K P F +
Sbjct: 196 KVPTLGLVQMSVFFMLVEGRYFPENA-WIGQMDREPGDLGFDPLKLTKKPGFDLKKAQLQ 254
Query: 521 EVKNGRL 541
E+KNGRL
Sbjct: 255 ELKNGRL 261
[48][TOP]
>UniRef100_A8KCS2 Light harvesting complex protein 11 n=1 Tax=Guillardia theta
RepID=A8KCS2_GUITH
Length = 225
Score = 76.3 bits (186), Expect = 1e-12
Identities = 49/114 (42%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Frame = +2
Query: 224 WMQEAEIKHGRICMLACLGLLVQEFFTFPF----YKNAPHLATAGHDYGVKVGGMVHILI 391
W +EAEIKHGRICMLA G +VQ+ + FPF YK HD +K G + +L
Sbjct: 74 WAREAEIKHGRICMLAATGSIVQDLYHFPFIDKWYKGEKMWGL--HDAAIKSGALWQVLF 131
Query: 392 GVIIFEALTTPAIVQMINGGDRQPGYFGFDPLKLGKNP-SFA---VNEVKNGRL 541
+ + E P ++++ NG G GFDPL L +P +FA V EVKNGRL
Sbjct: 132 FIGLLE---LPFLLKLANGTVDGTGDIGFDPLGLKNDPETFARRQVTEVKNGRL 182
[49][TOP]
>UniRef100_B8LE61 Photosystem I light harvesting protein (Fragment) n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LE61_THAPS
Length = 145
Score = 75.5 bits (184), Expect = 2e-12
Identities = 51/130 (39%), Positives = 71/130 (54%), Gaps = 11/130 (8%)
Frame = +2
Query: 185 FDPLNISSYLP--IKWMQEAEIKHGRICMLACLGLLVQEFFTFP----FYKNAPHLATAG 346
FDP S P I W +EAE+KHGR MLA +G++V EF P ++ P++ A
Sbjct: 1 FDPAGFSERAPEWINWFREAELKHGRQAMLAVVGMVVPEFVRIPGEAFSFEAIPNVLDA- 59
Query: 347 HDYGVKVGGMVHILIGVIIFEALTTPAIVQMINGGDRQPGYFGFDPLKL-----GKNPSF 511
HD + M IL+ + + EA++ A+ M N DR+PG FGFDPL + K
Sbjct: 60 HD-ALLDTSMKQILLWISLMEAMSLGALSNM-NEFDREPGNFGFDPLGMMPKDAAKAKEM 117
Query: 512 AVNEVKNGRL 541
+ E+KNGRL
Sbjct: 118 QLKELKNGRL 127
[50][TOP]
>UniRef100_Q9LKN8 Light-harvesting complex protein LHCC10 (Fragment) n=1
Tax=Guillardia theta RepID=Q9LKN8_GUITH
Length = 224
Score = 74.3 bits (181), Expect = 5e-12
Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
Frame = +2
Query: 224 WMQEAEIKHGRICMLACLGLLVQEFFTFPFYKN--APHLATAGHDYGVKVGGMVHILIGV 397
W +EAE+KHGRICMLA G +VQ+ + FPF HD +K G + +L +
Sbjct: 73 WAREAEVKHGRICMLAATGSIVQDLYHFPFMDKWFKGEKMWGLHDAAIKSGALWQVLFFI 132
Query: 398 IIFEALTTPAIVQMINGGDRQPGYFGFDPLKLGKNP-SFA---VNEVKNGRL 541
+ E P ++++ NG G GFDPL L +P +FA V EVKNGRL
Sbjct: 133 GLLE---LPFLLKLANGTVDGTGDIGFDPLGLKNDPETFARRQVTEVKNGRL 181
[51][TOP]
>UniRef100_Q9LKN9 Light-harvesting complex protein LHCC4 (Fragment) n=1
Tax=Guillardia theta RepID=Q9LKN9_GUITH
Length = 219
Score = 73.9 bits (180), Expect = 7e-12
Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Frame = +2
Query: 23 SPSAVLRRGAAERVSARPVARSATTVTMRAS--KSVPFMEVPPALAENPNMPGNVEFDPL 196
+PSA+L R + P + +++ +P P +L + G+ FDP
Sbjct: 17 APSAMLPRATRAARATGPSMQLYKDGSLQGKGVNIIPIFPRPASL--DGTAVGDQGFDPF 74
Query: 197 NISSYLPIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATAG---------H 349
SS++ +K+++EAEIKHGRI MLA G++V+ AP + + H
Sbjct: 75 GFSSWVNMKFVREAEIKHGRIAMLAFAGIMVEAAGI-----KAPGVESVFGPTKDIFEIH 129
Query: 350 DYGVKVGGMVHILIGVIIFE-ALTTPAIVQMIN--GGDRQPGYFGFDPLKLGKNPSF--A 514
+ V+ G M IL+ E + PA+ +M+N R PG FGFDPL LGK
Sbjct: 130 NLAVEKGSMGQILLWTGFLEMVIGWPAMNEMLNDPSSKRIPGDFGFDPLGLGKGSMARKQ 189
Query: 515 VNEVKNGRL 541
++E+KNGRL
Sbjct: 190 LSEIKNGRL 198
[52][TOP]
>UniRef100_A8KCN1 Light harvesting complex protein 1 (Fragment) n=1 Tax=Guillardia
theta RepID=A8KCN1_GUITH
Length = 216
Score = 71.2 bits (173), Expect = 4e-11
Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
Frame = +2
Query: 224 WMQEAEIKHGRICMLACLGLLVQEFFTFPFYKN--APHLATAGHDYGVKVGGMVHILIGV 397
W +EAE+KHGR+CMLA G +VQ+ + FPF HD +K G + +L +
Sbjct: 65 WAREAEVKHGRVCMLAATGAIVQDLYHFPFIDKWYQGEKMWGLHDAAIKSGALWQVLFFI 124
Query: 398 IIFEALTTPAIVQMINGGDRQPGYFGFDPLKLGKNP-SFA---VNEVKNGRL 541
+ E P ++++ +G G GFDPL L +P +FA + EVKNGRL
Sbjct: 125 GLLE---LPFLLKLRDGTVDGTGDIGFDPLGLKNDPDAFARRQITEVKNGRL 173
[53][TOP]
>UniRef100_B8BYV3 Member of fucoxanthin chlorophyll a/c family, lhca clade n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BYV3_THAPS
Length = 219
Score = 70.5 bits (171), Expect = 7e-11
Identities = 60/184 (32%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Frame = +2
Query: 35 VLRRGAAERVSARPVARSATTVTMRASKS--VPFMEVPPALAENPNMPGNVEFDPLNISS 208
VL A S P A S + + A KS +PF+ P L + +M G+ FDPL +S+
Sbjct: 6 VLTLLAGSAYSFCPAANSVRSSALNAEKSQAMPFLNKPALL--DGSMAGDKGFDPLGLST 63
Query: 209 Y----LPIKWMQEAEIKHGRICMLACLGLL-VQEFFTFPFYKNAPHLATAGHDYGVKVGG 373
+ + W++EAEIKH R+ MLA G L V+ F P + A + +
Sbjct: 64 IDDVGIDLYWLREAEIKHARVAMLAVAGALQVEVFGPAPGCEMATAKCQTDAFWQIWSAH 123
Query: 374 MVHI---LIGVIIFEALTTPAIVQMINGGDRQPGYFGFDPL-----KLGKNPSFAVNEVK 529
+I L+ + I EA++ A GDR PG FG DPL + K + E++
Sbjct: 124 PQYIAASLVLITIVEAVSGIAATTGRESGDRAPGDFGLDPLGFCNGDVAKADRLKLQEIE 183
Query: 530 NGRL 541
NGRL
Sbjct: 184 NGRL 187
[54][TOP]
>UniRef100_Q7XY93 Light-harvest protein (Fragment) n=1 Tax=Griffithsia japonica
RepID=Q7XY93_GRIJA
Length = 102
Score = 69.3 bits (168), Expect = 2e-10
Identities = 38/70 (54%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Frame = +2
Query: 347 HDYGVKVGGMVHILIGVIIFEALTTPAIVQMING-GDRQPGYFGFDPLKLGKNPS----F 511
H+ GV+ G M IL+ FE +T PA+ QM++G DR PG F FDPL LGK+P+ F
Sbjct: 1 HEGGVENGSMEQILLWCSFFEIMTMPAVFQMLSGKSDRAPGDFCFDPLGLGKDPAKMAVF 60
Query: 512 AVNEVKNGRL 541
VNEVKNGRL
Sbjct: 61 KVNEVKNGRL 70
[55][TOP]
>UniRef100_B8BYV4 Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8BYV4_THAPS
Length = 214
Score = 67.0 bits (162), Expect = 8e-10
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 11/181 (6%)
Frame = +2
Query: 32 AVLRRGAAERVSARPVARSATTVTMRASKSVPFMEVPPALAENPNMPGNVEFDPLNISSY 211
++L G+A + + ++ + S S+PFM P L +P+MPG FDPL +S+
Sbjct: 8 SLLAAGSASAFAPASNSVKSSALNAERSPSLPFMNKPALL--DPSMPGYKGFDPLGLSNI 65
Query: 212 ----LPIKWMQEAEIKHGRICMLACLGLL-VQEFFTFPFYKNAPHLATAGHDYGVKVGGM 376
+ + W++EAEIKH R+ MLA G + V+ F P + A + +
Sbjct: 66 DDVGIDLYWLREAEIKHARVAMLAVAGAVWVEAFGPAPGCEAATAKNQMDAFWQIWNSHP 125
Query: 377 VHI---LIGVIIFEALTTPAIVQMINGGDRQPGYFGFD---PLKLGKNPSFAVNEVKNGR 538
+I L+ ++I EA++ + G+R+PG+FGF P E++NGR
Sbjct: 126 QYIAASLVFIMIAEAVSGISTTTGRESGEREPGFFGFGSNFPKTDADMKKMQDKELENGR 185
Query: 539 L 541
L
Sbjct: 186 L 186
[56][TOP]
>UniRef100_A4QPJ2 Chloroplast protein Lhcz1 (Fragment) n=1 Tax=Bigelowiella natans
RepID=A4QPJ2_BIGNA
Length = 226
Score = 67.0 bits (162), Expect = 8e-10
Identities = 62/181 (34%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Frame = +2
Query: 38 LRRGAAERVSARPVARSATTVTMRASKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLP 217
+RRG + + P A + TT T + S++VPF+E P L P M G+ FDP+ ++
Sbjct: 41 VRRGRWQTRAEIPEAPTTTTET-KMSEAVPFLERPSNLDAYP-MAGDYGFDPIKLAKDKE 98
Query: 218 -IKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYK--NAPHLA--TAGHDYGVKVGGMVH 382
+ + AEIKHGR+ MLA + +QE K N P+L T+G V GG+
Sbjct: 99 TLIQYRLAEIKHGRLAMLAAVAWPLQELENPVLAKMFNLPNLVEETSGRSPSVLNGGLEQ 158
Query: 383 ILIGVIIFEALTTPAIVQMIN---GGDRQPGYFGFDPLKL-----GKNPSFAVNEVKNGR 538
+ L T I + N GG QPG +GFDPL L + E+ NGR
Sbjct: 159 VSATYWTAVLLLTIVIETIGNDSWGGTIQPGDYGFDPLNLYPKDKAGQMAMQEKELNNGR 218
Query: 539 L 541
L
Sbjct: 219 L 219
[57][TOP]
>UniRef100_B8BU33 Fucoxanthin chlorophyll a/c light-harvesting protein n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BU33_THAPS
Length = 252
Score = 65.5 bits (158), Expect = 2e-09
Identities = 58/174 (33%), Positives = 88/174 (50%), Gaps = 32/174 (18%)
Frame = +2
Query: 113 SKSVPFMEVPPALAENPNMPGNVEFDPLNISSY------------------LP-IKWMQE 235
SK++PF+ P L + + G+V FDP +SS LP + WM+E
Sbjct: 49 SKAMPFLPRPINL--DGSYVGDVGFDPFYLSSIDKNFAGFIQPPSWEETNGLPTLYWMRE 106
Query: 236 AEIKHGRICMLACLGLLVQEF-FTFPF----YKNAPHLATAGHDYGVKVGGMVHILIGVI 400
AE+KHGRI M+A G L +F FP Y + P+ A + H+ V G M +++ +I
Sbjct: 107 AELKHGRIAMMAFAGWLATDFGVRFPGAGEPYTSVPN-AFSAHNIMVDSGAM-WVMLSLI 164
Query: 401 IFEALTTPAIVQMINGG--DRQPGYFGFDPLKLGKNPS------FAVNEVKNGR 538
F ++T A++ ++ G DR+ G F FDPL K S + E++NGR
Sbjct: 165 GFIEISTAAVLVEVSKGENDREAGDFCFDPLGFCKGKSADAINTMKLKELQNGR 218
[58][TOP]
>UniRef100_B8C2K6 Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8C2K6_THAPS
Length = 198
Score = 64.7 bits (156), Expect = 4e-09
Identities = 53/156 (33%), Positives = 76/156 (48%), Gaps = 6/156 (3%)
Frame = +2
Query: 50 AAERVSARPVARSATTVTMRASKSVPFMEVPPALAENPNMPGNVEFDPLNISSY-LPIKW 226
AA + V RS T SKS+PF+ VP L + +M G+V FDP+ +S + +
Sbjct: 13 AASAFAPASVGRS-TVALNEMSKSIPFLTVPEKL--DGSMAGDVGFDPMGLSDIQTDLNY 69
Query: 227 MQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATAGHDYGVKVGGMVHILIGVII- 403
+ AE+KHGRICMLA +G++ QE+ PHL G Y K +G
Sbjct: 70 ARWAELKHGRICMLAVVGMVWQEY--------GPHL--PGDAYATKDPWEAISSVGFASN 119
Query: 404 FEALTTPAIVQMING----GDRQPGYFGFDPLKLGK 499
F+ L +V++ N GD PG G+ +L K
Sbjct: 120 FQTLLAIGVVELANWNKYYGDGTPGDIGWTGGQLSK 155
[59][TOP]
>UniRef100_A1YZ14 Chloroplast light-harvesting complex protein 10 (Fragment) n=1
Tax=Geminigera cryophila RepID=A1YZ14_9CRYP
Length = 99
Score = 64.7 bits (156), Expect = 4e-09
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Frame = +2
Query: 233 EAEIKHGRICMLACLGLLVQEFFTFPFYKN--APHLATAGHDYGVKVGGMVHILIGVIIF 406
EAEIKHGR+CMLA G +VQ+ +TFPF HD +K G + +L + +
Sbjct: 3 EAEIKHGRVCMLAATGAVVQDLYTFPFMSKWFQGEKMWGLHDAAIKSGALWQVLWFIGLL 62
Query: 407 EALTTPAIVQMINGGDRQPGYFGFDPLKLGKNP 505
E P ++++ NG G GFDPL L ++P
Sbjct: 63 E---IPFLLKLANGSIDGTGDIGFDPLGLAQDP 92
[60][TOP]
>UniRef100_B7GAS4 Protein fucoxanthin chl a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7GAS4_PHATR
Length = 246
Score = 63.9 bits (154), Expect = 7e-09
Identities = 66/208 (31%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Frame = +2
Query: 14 FVPSPSAVLRRGAAERVSARPVARSATTVTM-RASKSVPFMEVPPALAENPNMPGNVEFD 190
F P+ S + +A P T V S++VPF+ P L + + PG+ FD
Sbjct: 18 FAPTSSTQASTSSTSLQAAMPDRLWNTMVDKTERSRAVPFLPRPINL--DGSSPGDQGFD 75
Query: 191 PLNISSY-------------------LPIKWMQEAEIKHGRICMLACLGLLVQEF-FTFP 310
P +SS + WM+EAEIKH R+ MLA G + +F FP
Sbjct: 76 PFYLSSIPKNFAGFLQPPSWEETGGISTLYWMREAEIKHCRVAMLAVTGWIATDFGVRFP 135
Query: 311 F----YKNAPHLATAGHDYGVKVGGMVHILIGVIIFEALTTPAIVQMING--GDRQPGYF 472
Y + P+ A H+ V G M +L+ + E T A+VQ+ G DR G F
Sbjct: 136 GAGAPYTDIPNAYNA-HNILVDQGTMTVMLLAIGFVEFCTGAALVQVSKGELTDRDAGDF 194
Query: 473 GFD-PLKLGKN----PSFAVNEVKNGRL 541
GFD L GK+ + EV NGRL
Sbjct: 195 GFDGGLLKGKSAEAIKTMKTKEVNNGRL 222
[61][TOP]
>UniRef100_B8BU32 Fucoxanthin chlorophyll a/c protein n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8BU32_THAPS
Length = 254
Score = 62.8 bits (151), Expect = 2e-08
Identities = 56/176 (31%), Positives = 81/176 (46%), Gaps = 34/176 (19%)
Frame = +2
Query: 113 SKSVPFMEVPPALAENPNMPGNVEFDPLNISSY------------------LP-IKWMQE 235
S S+PF+ P L + + G+V FDP +SS LP + WM+E
Sbjct: 48 SASMPFLPRPINL--DGSYVGDVGFDPFYLSSIDKNFAGFIQPPSWEETNGLPTLYWMRE 105
Query: 236 AEIKHGRICMLACLGLLVQEFFTFPF--------YKNAPHLATAGHDYGVKVGGMVHILI 391
AE+KHGR+ MLA G L + P Y+ P+ +A HD V G + +L+
Sbjct: 106 AELKHGRVAMLAWTGWLATDGALGPVPLRFPGAAYQAVPNSLSA-HDIMVDQGSLGFMLV 164
Query: 392 GVIIFEALTTPAIVQMING-GDRQPGYFGFDPLKLGKNPSFA------VNEVKNGR 538
+ I E +V++ G DR G F DPL+ K S A + E++NGR
Sbjct: 165 AIGIIEVCCATVLVEVSKGESDRAAGDFKLDPLQFLKGKSDADINTMKLKELQNGR 220
[62][TOP]
>UniRef100_B7G503 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G503_PHATR
Length = 198
Score = 62.8 bits (151), Expect = 2e-08
Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Frame = +2
Query: 80 ARSATTVTMRASKSVPFMEVPPALAENPNMPGNV-------EFDPLNIS-SYLP-IKWMQ 232
A SA T + S+ P + A+ + MPG + +FDPL ++ +Y P + W +
Sbjct: 11 ASSALAFTPQKSRVTPSVSTSAAVDD---MPGAINFAAKEFKFDPLKLAETYEPFLPWFR 67
Query: 233 EAEIKHGRICMLACLGLLVQEFFTFP--FYKNAPHLATA-GHDYGVKVGGMVHILIGVII 403
E+E++HGR MLA +G + +F P Y A T HD +K G M +L+ + +
Sbjct: 68 ESELRHGRTAMLAVVGFIATDFVRIPGEAYSFAAIPKTIDAHDALLKSGPMYQLLLWIGL 127
Query: 404 FEALTTPAIVQMINGGDRQPGYFGF------DPLKLGKNPSFAVNEVKNGRL 541
++ + T G+R PG FG+ D K+ K +E+ NGRL
Sbjct: 128 WDLIVTAPAAVAAAKGERTPGDFGWTLMAPKDDAKMQKKKD---SELLNGRL 176
[63][TOP]
>UniRef100_Q5K288 Light harvesting complex protein (Fragment) n=1 Tax=Guillardia
theta RepID=Q5K288_GUITH
Length = 258
Score = 62.4 bits (150), Expect = 2e-08
Identities = 51/148 (34%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Frame = +2
Query: 140 PPALAENPNMPGNVEFDPLNISSYLP-IKWMQEAEIKHGRICMLACLGLLVQEFFTFPFY 316
P ++ + M GN FDPLN ++ + +K +EAE+KHGR+ MLA G V E
Sbjct: 80 PDSVLADCVMVGNKGFDPLNCATSMDALKNYREAELKHGRLAMLAAAGWPVSELVQPYLA 139
Query: 317 K--NAPHLATAGHDY-GVKVGGMVHI----LIGVIIFEALTTPAIVQMINGGDRQPGYFG 475
K P L AG + GG+ + + +IIF A G D PG G
Sbjct: 140 KMLGQPDLLAAGEKAPSLLNGGLDRVNPVFFMAIIIFTATVESVAFTRTRGADYIPGDLG 199
Query: 476 FDPLKL--GKNP----SFAVNEVKNGRL 541
FDPL+L GK+ + E+ NGRL
Sbjct: 200 FDPLRLYTGKSEPVKRDLELKELNNGRL 227
[64][TOP]
>UniRef100_B7FSP4 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FSP4_PHATR
Length = 199
Score = 62.0 bits (149), Expect = 3e-08
Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Frame = +2
Query: 32 AVLRRGAAERVSARPVARSATTVTMRA---SKSVPFMEVPPALAENPNMPGNVEFDPLNI 202
A L AA A ++ A +V++ A SKS+PF+ P L + +M G++ FDP+ +
Sbjct: 8 AALLASAAAFAPASMQSQRAGSVSLNAEEMSKSIPFLVKPDKL--DGSMAGDMGFDPMRL 65
Query: 203 SSY-LPIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATAGHDYGVKVGGMV 379
S +K+ + +EIKHGRICMLA +G+LVQ+ + + G V G +
Sbjct: 66 SDIQTDLKYARWSEIKHGRICMLAIVGILVQQAGIHLPGEQFTNTDIFGAVDSVGFGANM 125
Query: 380 HILIGVIIFEALTTPAIVQMINGGDRQPGYFGFD 481
I G+ E T + G+ +PG GFD
Sbjct: 126 QIFAGIGAVEIATFNK-----HYGEGEPGDLGFD 154
[65][TOP]
>UniRef100_P10708 Chlorophyll a-b binding protein 7, chloroplastic n=1 Tax=Solanum
lycopersicum RepID=CB12_SOLLC
Length = 270
Score = 62.0 bits (149), Expect = 3e-08
Identities = 59/192 (30%), Positives = 80/192 (41%), Gaps = 25/192 (13%)
Frame = +2
Query: 41 RRGAAERVSARPVARSATTVTMRASKSVPFM---EVPPALAENPNMPGNVEFDPLNISSY 211
RR + S P ARSATTV + A P PP + ++PG+ FDPL ++S
Sbjct: 38 RRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDG-SLPGDFGFDPLGLASD 96
Query: 212 LP-IKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATAGHDYGVKVGGMVHIL 388
++W Q+AE+ H R ML G+ + E T N P TAG + I+
Sbjct: 97 PESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIV 156
Query: 389 IGVII-------FEALTTPAIV--------QMINGGD-RQPGYFGFDPLKLG-----KNP 505
V+I + + P V + G D PG FDPL G K
Sbjct: 157 ELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIK 216
Query: 506 SFAVNEVKNGRL 541
E+KNGRL
Sbjct: 217 ELRTKEIKNGRL 228
[66][TOP]
>UniRef100_B7FQS0 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FQS0_PHATR
Length = 217
Score = 61.2 bits (147), Expect = 5e-08
Identities = 58/161 (36%), Positives = 80/161 (49%), Gaps = 18/161 (11%)
Frame = +2
Query: 113 SKSVPFMEVPPALAENPNMPGNVEFDPLNISSY--LPIKWMQEAEIKHGRICMLACLGLL 286
SK++PF P L + +MPG+V FDP + + +M+EAEIKH R+ MLA G +
Sbjct: 49 SKALPFANRPKLL--DGSMPGDVGFDPFGFAGADKASLMYMREAEIKHCRLAMLAVAGWV 106
Query: 287 VQEFFTFPFYKNAPHLATA----GHDYGVKVGGMVHILIGVIIFEALTTPAIVQMIN--- 445
E F P +A L TA G + GG+ I I + +T IV++ N
Sbjct: 107 FAELFDKPI-ADAVGLPTALTKSGASPSILNGGLEKIDIAYWL-AVVTLAGIVEIENSKV 164
Query: 446 ----GGDRQPGYFGFDPLKL---GKNPSFAV--NEVKNGRL 541
G D G GFDP+ L K+ FA+ E+KNGRL
Sbjct: 165 KEDKGKDYILGDCGFDPIGLYPKEKSEQFAMQTKELKNGRL 205
[67][TOP]
>UniRef100_Q9ATC4 Light harvesting complex protein 2 (Fragment) n=1 Tax=Vaucheria
litorea RepID=Q9ATC4_VAULI
Length = 150
Score = 60.1 bits (144), Expect = 1e-07
Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 15/122 (12%)
Frame = +2
Query: 221 KWMQEAEIKHGRICMLACLGLLVQEF--------FTFPFYKNAPHLATAGHDYGVKVGGM 376
+W+QE+EIKHGRICMLA +G LV +T +Y + P G+
Sbjct: 9 QWLQESEIKHGRICMLAFVGTLVIHAGIHIPNLGYTSDWYNSFPEFVAK------NPLGL 62
Query: 377 VHILIGVIIFEALTTPAIVQMING-GDRQPGYFGFDPLKL--GKN----PSFAVNEVKNG 535
++ G+ I+E M G +R+PG+ FD L L GKN S + E+KNG
Sbjct: 63 AQVIAGLTIWEGFHGTETGLMWTGEANRKPGHLNFDLLNLMKGKNESQLKSIQLKEIKNG 122
Query: 536 RL 541
RL
Sbjct: 123 RL 124
[68][TOP]
>UniRef100_Q05093 Light harvesting complex I protein n=2 Tax=Chlamydomonas
reinhardtii RepID=Q05093_CHLRE
Length = 228
Score = 59.7 bits (143), Expect = 1e-07
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 10/177 (5%)
Frame = +2
Query: 41 RRGAAERVSARPVAR--SATTVTMRASKSVPFMEVPPALAENPNMPGNVEFDPLNISSY- 211
R A S R VA + + VTM+A +P + P L ++ +PGN FDPL++
Sbjct: 11 RTAAPRGFSGRRVAAVSNGSRVTMKAGNWLPGSDAPAWLPDD--LPGNYGFDPLSLGKEP 68
Query: 212 LPIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATAGHD---YGVKVGGMVH 382
+K E+E+ HGR ML G L E + + +AP A G +G++V ++
Sbjct: 69 ASLKRFTESEVIHGRWAMLGVAGSLAVELLGYGNWYDAPLWAVNGGKATWFGIEVPFDLN 128
Query: 383 ILIGVIIFEALTTPAIVQMINGGDRQPGYFGFDPLKLGKNPS----FAVNEVKNGRL 541
L+ F A+ + GG PG FDPL K+ S + E+KNGRL
Sbjct: 129 ALL-AFEFVAMAAAEGQRGDAGGVVYPG-GAFDPLGFAKDSSKSGELKLKEIKNGRL 183
[69][TOP]
>UniRef100_B8AJ38 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8AJ38_ORYSI
Length = 261
Score = 59.7 bits (143), Expect = 1e-07
Identities = 56/205 (27%), Positives = 80/205 (39%), Gaps = 28/205 (13%)
Frame = +2
Query: 11 TFVPSPSAVLRRGAA----ERVSARPVARSATTVTMRASKSVPFMEVPPALAENPNMPGN 178
T P P L R A V P AR A + + +P ++ PP L + +PG+
Sbjct: 17 TLSPKPVTALSRSMAAIPGHHVFQSPRARIAVRASTERATWLPGLDPPPHL--DGTLPGD 74
Query: 179 VEFDPLNISSY-LPIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATAGHDY 355
FDPL + +KW +AE+ H R M G+L +F N P AG
Sbjct: 75 FGFDPLGLGEEPANLKWYVQAELVHCRFAMAGVAGILATDFIRVSGINNLPVWFEAGATK 134
Query: 356 GVKVGGMVHILIGVIIFEALTTPAIVQMINGGDR----------------QPGYFG---F 478
+ +++ T + IN G + QPGY G F
Sbjct: 135 FDFANTTALFFVQLLLMGFAETKRYMDFINPGSQAEEGTFLGIEAALAGSQPGYPGGPLF 194
Query: 479 DPLKLGKNPSFA----VNEVKNGRL 541
+PL L K+ A + E+KNGRL
Sbjct: 195 NPLGLAKDIENADEAKLKEIKNGRL 219
[70][TOP]
>UniRef100_A8J249 Light-harvesting protein of photosystem I n=1 Tax=Chlamydomonas
reinhardtii RepID=A8J249_CHLRE
Length = 239
Score = 59.7 bits (143), Expect = 1e-07
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 10/177 (5%)
Frame = +2
Query: 41 RRGAAERVSARPVAR--SATTVTMRASKSVPFMEVPPALAENPNMPGNVEFDPLNISSY- 211
R A S R VA + + VTM+A +P + P L ++ +PGN FDPL++
Sbjct: 11 RTAAPRGFSGRRVAAVSNGSRVTMKAGNWLPGSDAPAWLPDD--LPGNYGFDPLSLGKEP 68
Query: 212 LPIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATAGHD---YGVKVGGMVH 382
+K E+E+ HGR ML G L E + + +AP A G +G++V ++
Sbjct: 69 ASLKRFTESEVIHGRWAMLGVAGSLAVELLGYGNWYDAPLWAVNGGKATWFGIEVPFDLN 128
Query: 383 ILIGVIIFEALTTPAIVQMINGGDRQPGYFGFDPLKLGKNPS----FAVNEVKNGRL 541
L+ F A+ + GG PG FDPL K+ S + E+KNGRL
Sbjct: 129 ALL-AFEFVAMAAAEGQRGDAGGVVYPG-GAFDPLGFAKDSSKSGELKLKEIKNGRL 183
[71][TOP]
>UniRef100_O81932 Fucoxanthin chlorophyll a/c protein (Fragment) n=1 Tax=Cyclotella
cryptica RepID=O81932_9STRA
Length = 164
Score = 59.3 bits (142), Expect = 2e-07
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 6/141 (4%)
Frame = +2
Query: 119 SVPFMEVPPALAENPNMPGNVEFDPLNISSY-LPIKWMQEAEIKHGRICMLACLGLLVQE 295
S+PF+ VP L + +MPG++ FDP+ +S + + + +E+KHGRICMLA +G++ QE
Sbjct: 1 SIPFLTVPEKL--DGSMPGDMGFDPMGLSDIQTDLNYARWSELKHGRICMLAVVGMVWQE 58
Query: 296 FFTFPFYKNAPHLATAGHDYGVKVGGMVHILIGVII-FEALTTPAIVQMING----GDRQ 460
+ PHL G Y + +G + L +V++ N GD
Sbjct: 59 Y--------GPHL--PGDAYATRDPWEAISSVGFASNIQTLLAIGVVELANWNKYYGDGT 108
Query: 461 PGYFGFDPLKLGKNPSFAVNE 523
PG G+D +L S AV +
Sbjct: 109 PGDIGWDGGQLKNMDSAAVKK 129
[72][TOP]
>UniRef100_B7G6N5 Protein fucoxanthin chlorophyll a/c protein (Fragment) n=1
Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B7G6N5_PHATR
Length = 246
Score = 59.3 bits (142), Expect = 2e-07
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Frame = +2
Query: 113 SKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKWM-QEAEIKHGRICMLACLGLLV 289
S+++PF + P AL + G+V FDP+ +S W +EAE+KHGR+ MLA G +
Sbjct: 59 SEAIPFQKRPHAL--DGTFAGDVGFDPIGFASSKEDLWKYREAEVKHGRLAMLASAGWIF 116
Query: 290 QEFFTFP---FYKNAPHLATAGHDYGVKVGGM-----VHILIGVIIFEALTTPAIVQMIN 445
E F P + P L + + + GG+ V+ + ++ A+ I + N
Sbjct: 117 AERFDRPLAQLFSMEPVLDASNRNPALLNGGLGKVSPVYWVSCLVAAAAIDLNGIEKSRN 176
Query: 446 GGDRQPGYFGFDPLKL-GKNPS----FAVNEVKNGRL 541
+ PG G+DPL L +PS + E+K+GRL
Sbjct: 177 DPNYFPGNLGWDPLGLYPSDPSGQRRMLLAEIKHGRL 213
[73][TOP]
>UniRef100_Q5ENM0 Chloroplast light harvesting complex protein (Fragment) n=1
Tax=Heterocapsa triquetra RepID=Q5ENM0_HETTR
Length = 166
Score = 58.5 bits (140), Expect = 3e-07
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Frame = +2
Query: 8 GTFVPSPSAVLRR----GAAERVSARPV----ARSATTVTMRASKSVPFMEVPPALAENP 163
GTF +P A+++ G + V + + A T S +VPF+ P L
Sbjct: 10 GTFGMTPLALIKAEGFWGPSVEVFVKDIPICAGLCAMDKTSEMSPAVPFLNYPVPL--KG 67
Query: 164 NMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLACLGLLVQEF-FTFPFYKNAPHLAT 340
+ FDPL +S LP+ +++E+E+KHGR+CMLA +G + + FP +
Sbjct: 68 YVGDEKGFDPLGVSDALPVYYLRESELKHGRVCMLATIGWMATDLGVRFPGDQFQNVSTV 127
Query: 341 AGHDYGVKVGGMVHILIGVIIFE 409
HD V++G M L V +E
Sbjct: 128 GAHDKMVELGLMQPFLATVAAYE 150
[74][TOP]
>UniRef100_B2WWS8 LHCV 2 (Fragment) n=2 Tax=Eukaryota RepID=B2WWS8_ELYCH
Length = 121
Score = 58.5 bits (140), Expect = 3e-07
Identities = 42/121 (34%), Positives = 59/121 (48%), Gaps = 15/121 (12%)
Frame = +2
Query: 221 KWMQEAEIKHGRICMLACLGLLVQEF--------FTFPFYKNAPHLATAGHDYGVKVGGM 376
+W+QE+EIKHGRICMLA +G LV +T +Y + P G+
Sbjct: 7 QWLQESEIKHGRICMLAFVGTLVIHAGIHIPNLGYTSDWYNSFPEFVAK------NPLGL 60
Query: 377 VHILIGVIIFEALTTPAIVQMING-GDRQPGYFGFDPLKL--GKN----PSFAVNEVKNG 535
++ G+ I+E M G +R+PG+ FD L L GKN S + E+KNG
Sbjct: 61 AQVIAGLTIWEGFHGTETGLMWTGEANRKPGHLNFDLLNLMKGKNESQLKSIQLKEIKNG 120
Query: 536 R 538
R
Sbjct: 121 R 121
[75][TOP]
>UniRef100_Q6Z7Q1 Os02g0764500 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q6Z7Q1_ORYSJ
Length = 261
Score = 57.4 bits (137), Expect = 7e-07
Identities = 55/205 (26%), Positives = 79/205 (38%), Gaps = 28/205 (13%)
Frame = +2
Query: 11 TFVPSPSAVLRRGAA----ERVSARPVARSATTVTMRASKSVPFMEVPPALAENPNMPGN 178
T P P L R A V P AR A + + +P ++ PP L + +PG+
Sbjct: 17 TLSPKPVTALSRSMAAIPGHHVFQSPRARIAVRASTERATWLPGLDPPPHL--DGTLPGD 74
Query: 179 VEFDPLNISSY-LPIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATAGHDY 355
FDPL + +KW +AE+ H R M G+L + N P AG
Sbjct: 75 FGFDPLGLGEEPANLKWYVQAELVHCRFAMAGVAGILATDLIRVSGINNLPVWFEAGATK 134
Query: 356 GVKVGGMVHILIGVIIFEALTTPAIVQMINGGDR----------------QPGYFG---F 478
+ +++ T + IN G + QPGY G F
Sbjct: 135 FDFANTTALFFVQLLLMGFAETKRYMDFINPGSQAEEGTFLGIEAALAGSQPGYPGGPLF 194
Query: 479 DPLKLGKNPSFA----VNEVKNGRL 541
+PL L K+ A + E+KNGRL
Sbjct: 195 NPLGLAKDIENADEAKLKEIKNGRL 219
[76][TOP]
>UniRef100_Q9FVE3 Chlorophyll A-B binding protein of LHCI n=1 Tax=Chlamydomonas
reinhardtii RepID=Q9FVE3_CHLRE
Length = 239
Score = 57.0 bits (136), Expect = 8e-07
Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 10/177 (5%)
Frame = +2
Query: 41 RRGAAERVSARPVAR--SATTVTMRASKSVPFMEVPPALAENPNMPGNVEFDPLNISSY- 211
R A S R VA + + VTM+A +P + P L ++ +PGN FDPL++
Sbjct: 11 RTAAPRGFSGRRVAAVSNGSRVTMKAGNWLPGSDAPAWLPDD--LPGNYGFDPLSLGKEP 68
Query: 212 LPIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATAGHD---YGVKVGGMVH 382
+K E+E+ HGR ML G L E + + +AP A G +G++V ++
Sbjct: 69 ASLKRFTESEVIHGRWAMLGVAGSLAVELLGYGNWYDAPLWAVNGGKATWFGIEVPFDLN 128
Query: 383 ILIGVIIFEALTTPAIVQMINGGDRQPGYFGFDPLKLGKNPS----FAVNEVKNGRL 541
L+ F A+ + R PG FDPL K+ S + E+KNGRL
Sbjct: 129 ALL-AFEFVAMAAAEGQRRRCRRRRLPG-GAFDPLGFAKDSSKSGELKLKEIKNGRL 183
[77][TOP]
>UniRef100_Q3B9U6 Chloroplast light-harvesting complex I protein Lhca2 n=1
Tax=Ostreococcus tauri RepID=Q3B9U6_OSTTA
Length = 242
Score = 56.2 bits (134), Expect = 1e-06
Identities = 54/187 (28%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Frame = +2
Query: 44 RGAAERVSARPVARSATTVTMRASKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPI- 220
R R S R V SA A + V + PA + ++PG+ FDPL++S+ +
Sbjct: 18 RATTTRASRRSVVVSAEA---GAERPVWYPGKAPAPHLDGSLPGDFGFDPLSLSADPEMR 74
Query: 221 KWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATAG-HDYGVKVGGMVHILIGV 397
KWM +AE++H R ML G + E T + P+ AG + Y G + I + +
Sbjct: 75 KWMVQAELQHARWAMLGVAGAVAPELLTKIGVADLPNWVDAGTYQYWAPAGPLFFIQMAM 134
Query: 398 IIFEAL-------------TTPAIVQMINGGDRQPGYFG--FDPLKLGKNPSFA----VN 520
+ + T P N + GY G FD L K+P+ A +
Sbjct: 135 FNWAEVRRWQDMKNPGSMNTDPLFGYNSNDTNTDVGYPGGLFDKLGYAKDPAKAKELKLK 194
Query: 521 EVKNGRL 541
E+KNGRL
Sbjct: 195 EIKNGRL 201
[78][TOP]
>UniRef100_B2WWS9 LHCV 2 (Fragment) n=1 Tax=Elysia chlorotica RepID=B2WWS9_ELYCH
Length = 121
Score = 56.2 bits (134), Expect = 1e-06
Identities = 41/121 (33%), Positives = 58/121 (47%), Gaps = 15/121 (12%)
Frame = +2
Query: 221 KWMQEAEIKHGRICMLACLGLLVQEF--------FTFPFYKNAPHLATAGHDYGVKVGGM 376
+W+QE+EIKHGRICMLA +G LV +T +Y + P G+
Sbjct: 7 QWLQESEIKHGRICMLAFVGTLVIHAGIHIPNLGYTSDWYNSFPEFVAK------NPLGL 60
Query: 377 VHILIGVIIFEALTTPAIVQMING-GDRQPGYFGFDPLKL--GKN----PSFAVNEVKNG 535
++ G+ I+E M G +R+PG+ D L L GKN S + E+KNG
Sbjct: 61 AQVIAGLTIWEGFHGTETGLMWTGEANRKPGHLNLDLLNLMKGKNESQLKSIQLKEIKNG 120
Query: 536 R 538
R
Sbjct: 121 R 121
[79][TOP]
>UniRef100_B7FSI1 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FSI1_PHATR
Length = 270
Score = 55.8 bits (133), Expect = 2e-06
Identities = 56/161 (34%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Frame = +2
Query: 113 SKSVPFMEVPPALAENPNMPGNVEFDPLNISSYLPIKW-MQEAEIKHGRICMLACLGLLV 289
S+S+PF+ P ALA+ + GNV FDPL ++ W +EAEIKH R+ MLA G +
Sbjct: 73 SQSLPFLVCPSALADCNELAGNVGFDPLGLAKNKEQLWEFREAEIKHARLAMLAAAGYPL 132
Query: 290 QEFF--TFPFYKNAPHLATAGHDYGVKV--GGMVHILIGVIIFEALTTPAI----VQMIN 445
E + Y N L G D GG+ + F T AI V
Sbjct: 133 SELYDRQIAEYFNMQALVD-GTDRAPSFLNGGLERVSPVWWGFCLGMTAAIDLYGVAKAR 191
Query: 446 GGDRQ--PGYFGFDPLKLGKNPS-------FAVNEVKNGRL 541
GD PG GFDP +G PS + E+K+GRL
Sbjct: 192 SGDPTYFPGNLGFDP--VGLYPSDRKGRMRMELAEIKHGRL 230
[80][TOP]
>UniRef100_B7GCV9 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7GCV9_PHATR
Length = 232
Score = 55.5 bits (132), Expect = 2e-06
Identities = 60/198 (30%), Positives = 90/198 (45%), Gaps = 18/198 (9%)
Frame = +2
Query: 2 FVGTFVPSPSAVLRRGAAERVSARPVARSATTVTMRASKS--VPFMEVPPALAENPNMPG 175
F+ F + SA + A S P T V R++KS VPFM P + + PG
Sbjct: 7 FIVAFFGTASAFMPPKDARLSSQSPSVLFMTDVVDRSAKSASVPFM--PKNKLLDGSYPG 64
Query: 176 NVEFDPLNIS-SYLPIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATAGHD 352
+ FDPL ++ S ++ ++AEIKHGR+ MLA LG E + NA + D
Sbjct: 65 DAGFDPLFLADSQALLEDYRDAEIKHGRLAMLAALGWPASEVWDRAI-ANAVSMPPV-VD 122
Query: 353 YGVKVGGMVHILIGVIIFE----ALTTPAIVQMINGGDRQ------PGYFGFDPLKL--- 493
++ +++ +G I E +L + ++ N R+ PG FDPL L
Sbjct: 123 ESLRAPSVLNGGLGKIPVEYWAASLFVASFIECANIQKRRTDDRWFPGNLNFDPLGLYPK 182
Query: 494 --GKNPSFAVNEVKNGRL 541
K + E+KNGRL
Sbjct: 183 SEAKQREMQLKEIKNGRL 200
[81][TOP]
>UniRef100_A4QPI1 Chloroplast light-harvesting complex I protein Lhca3 n=1
Tax=Euglena gracilis RepID=A4QPI1_EUGGR
Length = 295
Score = 55.5 bits (132), Expect = 2e-06
Identities = 54/165 (32%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Frame = +2
Query: 83 RSATTVTMRASKSVP-----FMEVPPALAENPNMPGNVEFDPLNISSYLP-IKWMQEAEI 244
RSA+T R S SV F V P PG+ FDP +S+ M+ AEI
Sbjct: 72 RSAST---RGSASVEERLLWFPNVTPPAYLTGEFPGDRGFDPAGLSADPETFDRMRIAEI 128
Query: 245 KHGRICMLACLGLLVQEFFTFPFYKNAPHLATAGHDYGVKVGGMVHILIGVIIFE----- 409
HGR+ MLA +G LV +F + AP +A G+ +G + ++G +FE
Sbjct: 129 IHGRVAMLAVVGALVPDFLGKGNWFEAPAIA------GIDIGDVQQFILGYGVFEFGRGL 182
Query: 410 -ALTTPAIVQMINGGDRQPGYFGFDPLKLGKNPSFAVNEVKNGRL 541
+ PA + Y GFDPL L + + E+KNGRL
Sbjct: 183 NKSSNPAAI-----------YPGFDPLNLTSDYTKEA-EIKNGRL 215
[82][TOP]
>UniRef100_Q5ENM9 Chloroplast light harvesting complex protein (Fragment) n=1
Tax=Heterocapsa triquetra RepID=Q5ENM9_HETTR
Length = 252
Score = 54.7 bits (130), Expect = 4e-06
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Frame = +2
Query: 173 GNVEFDPLNISSYLP-IKWMQEAEIKHGRICMLACLGLLVQEFFTFP----FYKNAPHLA 337
G E+DP +S + + + +EAE+KHGRI MLA +GL+V +F P ++ P++
Sbjct: 113 GRYEYDPAGLSQWTEFVPYFREAELKHGRIAMLAWVGLVVPDFVRIPGERYSFEAIPNVL 172
Query: 338 TAGHDYGVKVGGMVHILIGVIIFEALTTPAIVQ---MINGGDRQPGYFGFDPLKLGKNPS 508
A VG IL + + E + + + GD G GF P
Sbjct: 173 DAHDKLNGAVGVNFQILFWIALVELCCAKKVFEWNSLETAGDY--GLTGFFPADEEGQKR 230
Query: 509 FAVNEVKNGRL 541
+ E+KNGRL
Sbjct: 231 MRLAELKNGRL 241
[83][TOP]
>UniRef100_B8LE60 Putative uncharacterized protein (Fragment) n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8LE60_THAPS
Length = 131
Score = 54.7 bits (130), Expect = 4e-06
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
Frame = +2
Query: 230 QEAEIKHGRICMLACLGLLVQEFFTFP--FYKNAPHLATAGHDYGVKVGGMVHILIGVII 403
+E+EI+HGR MLA G +VQ+F P Y T G + G M +L+ + +
Sbjct: 1 RESEIRHGRTAMLAVTGFIVQDFVRIPGDAYSFEAVPKTVGAHDALLEGPMHQLLLWISL 60
Query: 404 FEALTTPAIVQMINGGDRQPGYFGFD---PLKLGKNPSFAVNEVKNGRL 541
++ + T +Q G+R+PG FG+ P + +NE+ NGRL
Sbjct: 61 WDIVITYPSIQATMKGEREPGDFGWKWLAPKDEATLKKYEMNELLNGRL 109
[84][TOP]
>UniRef100_A2SY17 Light-harvesting chlorophyll-a/b binding protein Lhca5.1 (Fragment)
n=1 Tax=Mesostigma viride RepID=A2SY17_MESVI
Length = 195
Score = 54.3 bits (129), Expect = 6e-06
Identities = 52/170 (30%), Positives = 73/170 (42%), Gaps = 6/170 (3%)
Frame = +2
Query: 20 PSPSAVLRRGAAERVSARPVARSATTVTMRASKSVPFMEVPPALAENPNMPGNVEFDPLN 199
P S V GAA S RP+ T + P L N ++PG+ FDP+
Sbjct: 37 PKRSVVRAGGAAPEPSERPLWYPGT-------------KAPEWL--NGSLPGDYGFDPVG 81
Query: 200 I-SSYLPIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATAGH-DYGVKVGG 373
SS ++WM AE+ H R ML G+L QE + PH AG Y
Sbjct: 82 FGSSPSSLRWMVHAELVHARWAMLGVAGVLGQE-LVHVTNGSIPHWYEAGKVSYFADTPT 140
Query: 374 MV---HILIGVIIFEALTTPAIVQMIN-GGDRQPGYFGFDPLKLGKNPSF 511
++ HIL+G + T ++N G QPG+ G + L LG +P +
Sbjct: 141 LIVVMHILMGFV-----ETKRYFDIVNPGSQAQPGFAGAERLMLGTSPGY 185
[85][TOP]
>UniRef100_A2SY15 Chloroplast light-harvesting complex I protein Lhca2 n=1
Tax=Mesostigma viride RepID=A2SY15_MESVI
Length = 264
Score = 53.5 bits (127), Expect = 9e-06
Identities = 50/186 (26%), Positives = 77/186 (41%), Gaps = 7/186 (3%)
Frame = +2
Query: 5 VGTFVPSPSAVLRR----GAAERVSARPVARSATTVTMRASKSVPFME--VPPALAENPN 166
V + S AVL R G A + SA+P + +RA + PPA + +
Sbjct: 4 VASIAASNVAVLARKAFVGQAVKASAKPAGAKPVSTVVRADLGKKWYTGAKPPAYLDG-S 62
Query: 167 MPGNVEFDPLNISSYLPI-KWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATA 343
MPG+ +DPL + + KW Q+ EI++GR M+ G+L + T + P A
Sbjct: 63 MPGDYGYDPLRMGGNPELLKWYQQGEIENGRWAMIGVAGMLFTDALTQFGISDLPDWYEA 122
Query: 344 GHDYGVKVGGMVHILIGVIIFEALTTPAIVQMINGGDRQPGYFGFDPLKLGKNPSFAVNE 523
G + LI + IF T +PG+ + +P + E
Sbjct: 123 GAVAQASSPFDLQTLIAIEIFVFATVEGFRISTWKKTGKPGFLDIMGM---DSPDMRLKE 179
Query: 524 VKNGRL 541
+KNGRL
Sbjct: 180 IKNGRL 185