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[1][TOP]
>UniRef100_Q9XG28 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9XG28_GALSU
Length = 302
Score = 144 bits (363), Expect = 4e-33
Identities = 73/142 (51%), Positives = 103/142 (72%), Gaps = 2/142 (1%)
Frame = +3
Query: 111 SKSVPFLLKPKNLDG-WAANAEFDPLGISDYIPVAYLRESELKHGRICMLASVGLIVQEV 287
SK++PF+L PKNLDG A + FDPLG ++ V ++RE+ELKH RI MLA++G +VQE+
Sbjct: 128 SKALPFMLWPKNLDGTMAGDVGFDPLGFTNVFDVKWMREAELKHCRIAMLAALGFMVQEL 187
Query: 288 FTWGGSYFPKIIPPIAAHDHYLQTG-MAQLLIFIGAFEAISYYAIKQTLAGNRAPGDFNF 464
+T+ YF K+ PP+ AHD Y++TG M+Q+L+F+ FE IS +A+ Q + G R PG F+F
Sbjct: 188 WTFPHPYFSKV-PPVLAHDVYVKTGGMSQILLFVIFFEIISVFAVSQMMEGKREPGVFHF 246
Query: 465 DPLNLGKDPSKRAHYEKAEIKN 530
DPL LGKDP YE +E++N
Sbjct: 247 DPLGLGKDPDTFRKYEWSELRN 268
[2][TOP]
>UniRef100_Q9M441 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9M441_GALSU
Length = 302
Score = 144 bits (363), Expect = 4e-33
Identities = 73/142 (51%), Positives = 103/142 (72%), Gaps = 2/142 (1%)
Frame = +3
Query: 111 SKSVPFLLKPKNLDG-WAANAEFDPLGISDYIPVAYLRESELKHGRICMLASVGLIVQEV 287
SK++PF+L PKNLDG A + FDPLG ++ V ++RE+ELKH RI MLA++G +VQE+
Sbjct: 128 SKALPFMLWPKNLDGTMAGDVGFDPLGFTNVFDVKWMREAELKHCRIAMLAALGFMVQEL 187
Query: 288 FTWGGSYFPKIIPPIAAHDHYLQTG-MAQLLIFIGAFEAISYYAIKQTLAGNRAPGDFNF 464
+T+ YF K+ PP+ AHD Y++TG M+Q+L+F+ FE IS +A+ Q + G R PG F+F
Sbjct: 188 WTFPHPYFSKV-PPVLAHDVYVKTGGMSQILLFVIFFEIISVFAVSQMMEGKREPGVFHF 246
Query: 465 DPLNLGKDPSKRAHYEKAEIKN 530
DPL LGKDP YE +E++N
Sbjct: 247 DPLGLGKDPDTFRKYEWSELRN 268
[3][TOP]
>UniRef100_A8KCQ6 Light harvesting complex protein 7 (Fragment) n=1 Tax=Guillardia
theta RepID=A8KCQ6_GUITH
Length = 198
Score = 127 bits (319), Expect = 5e-28
Identities = 71/156 (45%), Positives = 100/156 (64%), Gaps = 3/156 (1%)
Frame = +3
Query: 72 SVAVAPVRMMA-EMSKSVPFLLKPKNLDG-WAANAEFDPLGISDYIPVAYLRESELKHGR 245
+ AV ++M + + S +VPFL +P NLDG + + FDPLG SD + LRE+ELKHGR
Sbjct: 13 TAAVKSLKMQSGDFSAAVPFLKRPSNLDGSYVGDVGFDPLGFSDVFDLRVLREAELKHGR 72
Query: 246 ICMLASVGLIVQEVFTWGGSYFPKIIPPIAAHDHYLQTGM-AQLLIFIGAFEAISYYAIK 422
MLA +G IVQE++T+ +FPK+ P + AHD+++Q G +Q++ +I E A+
Sbjct: 73 FAMLAVLGFIVQELYTF--PFFPKMAP-VDAHDYFVQQGGGSQIIFWISFVEIFGVVALF 129
Query: 423 QTLAGNRAPGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
+TL G R PGDF FDPL L KD + Y AEIK+
Sbjct: 130 ETLQGKREPGDFAFDPLGLAKDEATLERYRLAEIKH 165
[4][TOP]
>UniRef100_A8KCQ1 Light harvesting complex protein 6 n=1 Tax=Guillardia theta
RepID=A8KCQ1_GUITH
Length = 218
Score = 125 bits (313), Expect = 2e-27
Identities = 78/170 (45%), Positives = 102/170 (60%), Gaps = 7/170 (4%)
Frame = +3
Query: 42 PRATSARATSSVAVAPV--RMMAEMSKSVPFLLKPKNLDGW-AANAEFDPLGISDYIPVA 212
P A R +SS VA V RM A MSKS+PFL KP LDG A + FDPLG+S V
Sbjct: 19 PSAPLTRPSSSRNVAAVGPRMQA-MSKSIPFLKKPAALDGTLAGDVGFDPLGLSSVADVR 77
Query: 213 YLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIPP---IAAHDHYLQTG-MAQLLI 380
+L E+ELKH R+ MLA++G IVQ++FT+ G K++ HD ++ G M Q+L+
Sbjct: 78 FLAEAELKHCRLAMLAALGAIVQDIFTFPG--VSKVVGSEKMTGVHDILVKQGAMGQILL 135
Query: 381 FIGAFEAISYYAIKQTLAGNRAPGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
++ E A+ +TL G RAPGDF FDPL GK+ R Y AE+KN
Sbjct: 136 WVSFLEVFGTLALFETLDGKRAPGDFKFDPLGFGKNAQTRERYALAEVKN 185
[5][TOP]
>UniRef100_Q5K269 Light harvesting protein 7 (Fragment) n=1 Tax=Guillardia theta
RepID=Q5K269_GUITH
Length = 203
Score = 121 bits (303), Expect = 3e-26
Identities = 71/171 (41%), Positives = 96/171 (56%), Gaps = 5/171 (2%)
Frame = +3
Query: 33 AAVPRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLDG-WAANAEFDPLGISDYIPV 209
A P A A S A+A M +MS+++PFL KPK LD A FDPLG SDY V
Sbjct: 1 AFAPAALPVNAGSRAAIARGPRMQQMSEAIPFLEKPKKLDSSMPGYAGFDPLGFSDYYDV 60
Query: 210 AYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIP----PIAAHDHYLQTGMAQLL 377
+L+E+E+KHGRICMLA VG+ E+ + P+ P+ A G Q+
Sbjct: 61 KWLQEAEIKHGRICMLAVVGMFHPEI-----AKLPQFASFSTNPLEAFYQLSFAGWLQIF 115
Query: 378 IFIGAFEAISYYAIKQTLAGNRAPGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
+FIG E+ S+ + T ++APGD FDPL LG +P+ R +Y AE+KN
Sbjct: 116 VFIGICESFSFEKVYYT---DKAPGDLGFDPLRLGSNPASRKYYANAEVKN 163
[6][TOP]
>UniRef100_A8KCN9 Light harvesting complex protein 3 n=1 Tax=Guillardia theta
RepID=A8KCN9_GUITH
Length = 218
Score = 121 bits (303), Expect = 3e-26
Identities = 71/171 (41%), Positives = 96/171 (56%), Gaps = 5/171 (2%)
Frame = +3
Query: 33 AAVPRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLDG-WAANAEFDPLGISDYIPV 209
A P A A S A+A M +MS+++PFL KPK LD A FDPLG SDY V
Sbjct: 16 AFAPAALPVNAGSRAAIARGPRMQQMSEAIPFLEKPKKLDSSMPGYAGFDPLGFSDYYDV 75
Query: 210 AYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIP----PIAAHDHYLQTGMAQLL 377
+L+E+E+KHGRICMLA VG+ E+ + P+ P+ A G Q+
Sbjct: 76 KWLQEAEIKHGRICMLAVVGMFHPEI-----AKLPQFASFSTNPLEAFYQLSFAGWLQIF 130
Query: 378 IFIGAFEAISYYAIKQTLAGNRAPGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
+FIG E+ S+ + T ++APGD FDPL LG +P+ R +Y AE+KN
Sbjct: 131 VFIGICESFSFEKVYYT---DKAPGDLGFDPLRLGSNPASRKYYANAEVKN 178
[7][TOP]
>UniRef100_Q5K286 Light harvesting protein 2 (Fragment) n=1 Tax=Guillardia theta
RepID=Q5K286_GUITH
Length = 244
Score = 120 bits (302), Expect = 5e-26
Identities = 81/184 (44%), Positives = 109/184 (59%), Gaps = 8/184 (4%)
Frame = +3
Query: 3 ASVGTRAFLGAAVPRATSARATSSVAVAPVRMMA----EMSKSVPFLLKPKNLDG-WAAN 167
A+ AF A R SA A S A++ MA S+SVPFL +P NLDG +
Sbjct: 2 AAASAAAFAPAPAGRL-SAPAASRAAISRGPRMAVFEGSFSESVPFLKQPTNLDGSLPGD 60
Query: 168 AEFDPLGISDYIPVAYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIPPIAAHDH 347
FDPLG S+ V LRE+ELKHGRI MLA +G +VQE +T+ +F K + PI AHD
Sbjct: 61 VGFDPLGFSEVFDVKVLREAELKHGRIAMLAVLGWLVQESYTF--PFFDK-VSPIEAHDL 117
Query: 348 YLQT-GMAQLLIFIGAFEAISYYAIKQTLAGNRAPGDFNFDPLNL--GKDPSKRAHYEKA 518
+++ GM+Q+L++ E A+ QT+ G R PGDF+FDPL L GK+ + Y+ A
Sbjct: 118 LVKSGGMSQILLWTSFLEIFGGIALFQTIQGTRYPGDFSFDPLGLSAGKNEANLEKYQLA 177
Query: 519 EIKN 530
EIK+
Sbjct: 178 EIKH 181
[8][TOP]
>UniRef100_A8KCP5 Light harvesting complex protein 5 n=1 Tax=Guillardia theta
RepID=A8KCP5_GUITH
Length = 235
Score = 120 bits (302), Expect = 5e-26
Identities = 81/184 (44%), Positives = 109/184 (59%), Gaps = 8/184 (4%)
Frame = +3
Query: 3 ASVGTRAFLGAAVPRATSARATSSVAVAPVRMMA----EMSKSVPFLLKPKNLDG-WAAN 167
A+ AF A R SA A S A++ MA S+SVPFL +P NLDG +
Sbjct: 10 AAASAAAFAPAPAGRL-SAPAASRAAISRGPRMAVFEGSFSESVPFLKQPTNLDGSLPGD 68
Query: 168 AEFDPLGISDYIPVAYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIPPIAAHDH 347
FDPLG S+ V LRE+ELKHGRI MLA +G +VQE +T+ +F K + PI AHD
Sbjct: 69 VGFDPLGFSEVFDVKVLREAELKHGRIAMLAVLGWLVQESYTF--PFFDK-VSPIEAHDL 125
Query: 348 YLQT-GMAQLLIFIGAFEAISYYAIKQTLAGNRAPGDFNFDPLNL--GKDPSKRAHYEKA 518
+++ GM+Q+L++ E A+ QT+ G R PGDF+FDPL L GK+ + Y+ A
Sbjct: 126 LVKSGGMSQILLWTSFLEIFGGIALFQTIQGTRYPGDFSFDPLGLSAGKNEANLEKYQLA 185
Query: 519 EIKN 530
EIK+
Sbjct: 186 EIKH 189
[9][TOP]
>UniRef100_P93449 Light-harvesting complex I polypeptide n=1 Tax=Porphyridium
purpureum RepID=P93449_PORCR
Length = 222
Score = 120 bits (300), Expect = 8e-26
Identities = 76/172 (44%), Positives = 98/172 (56%), Gaps = 7/172 (4%)
Frame = +3
Query: 36 AVPRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLDG-WAANAEFDPLGISDYIPVA 212
A ++ S +A V + MMAEMSKS+PFL KPKNLDG A + FDPLG SD V
Sbjct: 19 AAIQSKSVKAAVPVKAGRIAMMAEMSKSIPFLEKPKNLDGSMAGDVGFDPLGFSDKWDVK 78
Query: 213 YLRESELKHGRICMLASVGLIVQEVFTWGGSYFPK------IIPPIAAHDHYLQTGMAQL 374
+LRE+ELKHGRICMLA++G I E+ GG P + P+ A G+ Q+
Sbjct: 79 FLREAELKHGRICMLAALGFIYPEIM--GGKSIPSPEGYFTELNPLKAVKAIPTAGLLQI 136
Query: 375 LIFIGAFEAISYYAIKQTLAGNRAPGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
++F+ EAIS+ K + APGDF FDPL L K E +E+KN
Sbjct: 137 VLFVMVLEAISWN--KVFMDKTSAPGDFKFDPLGL-----KSPKMELSEVKN 181
[10][TOP]
>UniRef100_Q2IA67 Chloroplast light harvesting protein isoform 12 n=1 Tax=Isochrysis
galbana RepID=Q2IA67_ISOGA
Length = 231
Score = 119 bits (299), Expect = 1e-25
Identities = 66/163 (40%), Positives = 97/163 (59%), Gaps = 2/163 (1%)
Frame = +3
Query: 48 ATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLDGWAANAEFDPLGISDYIPVAYLRES 227
A + + A P + S+S+PFL+K K LDG+ + FDP+G S+ +P+ +LRE+
Sbjct: 47 APAVEKAEAPAPPPPPPPVQYSQSMPFLVKRKTLDGYVGDIGFDPVGFSEILPMDWLREA 106
Query: 228 ELKHGRICMLASVGLIVQEVFTWGGSYFPKIIPPIAAHDHYLQTG-MAQLLIFIGAFEAI 404
ELKH R+ MLA+VG + + F G F + AHD + +G M+QLL+++G E
Sbjct: 107 ELKHCRVAMLATVGFVFTDFFHISGFDF----TTLEAHDACVASGAMSQLLLWLGLLEVF 162
Query: 405 SYYAIKQTLAGN-RAPGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
+ I QTL G+ RA GDF+FDPL G DP+K A + E+ N
Sbjct: 163 GFIGIDQTLRGSGRAAGDFSFDPLGFGSDPAKMATLQMKELAN 205
[11][TOP]
>UniRef100_Q9FDZ6 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9FDZ6_GALSU
Length = 229
Score = 118 bits (295), Expect = 3e-25
Identities = 76/172 (44%), Positives = 97/172 (56%), Gaps = 13/172 (7%)
Frame = +3
Query: 54 SARATSSVAVAPVRMMAEM-----SKSVPFLLKPKNLDGWA-ANAEFDPLGISDYIPVAY 215
S+ SS+AV R+ + S SVPFL +P+NLDG A + FDPL ISD + + +
Sbjct: 24 SSHRQSSLAVHSHRLFHTLVANTKSPSVPFLERPQNLDGTAPGDVGFDPLYISDLLDIQW 83
Query: 216 LRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIPPIAAHDHYLQT---GMAQLLIFI 386
LRESE+KHGRI MLA++G IVQE G F + A D + Q G+ Q+ +FI
Sbjct: 84 LRESEIKHGRIAMLAALGFIVQEFVHLPGQVFSNKV----AVDAFFQVPRGGLWQIFLFI 139
Query: 387 GAFEAI----SYYAIKQTLAGNRAPGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
G E + + NR PGDF FDPL LGKDP R Y+ AEIKN
Sbjct: 140 GLLEFVMNKGKMTPLDMFSDPNRKPGDFGFDPLGLGKDPQTRRRYQVAEIKN 191
[12][TOP]
>UniRef100_Q5K258 Lhc7 protein (Fragment) n=1 Tax=Guillardia theta RepID=Q5K258_GUITH
Length = 176
Score = 117 bits (293), Expect = 5e-25
Identities = 66/145 (45%), Positives = 89/145 (61%), Gaps = 5/145 (3%)
Frame = +3
Query: 111 SKSVPFLLKPKNLDGW-AANAEFDPLGISDYIPVAYLRESELKHGRICMLASVGLIVQEV 287
SKS+PFL KP LDG A + FDPLG+S V +L E+ELKH R+ MLA++G IVQ++
Sbjct: 1 SKSIPFLKKPAALDGTLAGDVGFDPLGLSSVADVRFLAEAELKHCRLAMLAALGAIVQDI 60
Query: 288 FTWGGSYFPKIIPP---IAAHDHYLQTG-MAQLLIFIGAFEAISYYAIKQTLAGNRAPGD 455
FT+ G K++ HD ++ G M Q+L+++ E A+ +TL G RAPGD
Sbjct: 61 FTFPG--VSKVVGSEKMTGVHDILVKQGAMGQILLWVSFLEVFGTLALFETLDGKRAPGD 118
Query: 456 FNFDPLNLGKDPSKRAHYEKAEIKN 530
F FDPL GK+ R Y AE+KN
Sbjct: 119 FKFDPLGFGKNAQTRERYALAEVKN 143
[13][TOP]
>UniRef100_A8KCR3 Light harvesting complex protein 9 n=1 Tax=Guillardia theta
RepID=A8KCR3_GUITH
Length = 220
Score = 115 bits (288), Expect = 2e-24
Identities = 72/176 (40%), Positives = 92/176 (52%), Gaps = 6/176 (3%)
Frame = +3
Query: 21 AFLGAAVPRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLDG-WAANAEFDPLGISD 197
A A P SA + + M +MS+SVPFL +P LDG + FDP G S
Sbjct: 12 AAASAFAPTLPSAGVRAKTSAVSGMKMQQMSQSVPFLPRPAALDGKMVGDVGFDPFGFSS 71
Query: 198 YIPVAYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIPPIAAHDHYL--QTGMAQ 371
+ +LRESELKHGR+CMLAS+G IVQE F P+ + Y G+ Q
Sbjct: 72 KYDIKWLRESELKHGRVCMLASLGYIVQEFVHLP---FEATSNPVGSEAFYQVPAGGLWQ 128
Query: 372 LLIFIGAFEAISY---YAIKQTLAGNRAPGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
+ FIGA E S+ + + R PG+F FDPL GK+P RA YE AE+KN
Sbjct: 129 IFAFIGAIEHFSHNFKMSGSTMFSDGRTPGNFGFDPLGFGKNPQARARYELAELKN 184
[14][TOP]
>UniRef100_A8KCR0 Light harvesting complex protein 8 (Fragment) n=1 Tax=Guillardia
theta RepID=A8KCR0_GUITH
Length = 222
Score = 113 bits (283), Expect = 7e-24
Identities = 65/144 (45%), Positives = 88/144 (61%), Gaps = 9/144 (6%)
Frame = +3
Query: 126 FLLKPKNLDG-WAANAEFDPLGISDYIPVAYLRESELKHGRICMLASVGLIVQEVFTWGG 302
FL +P LDG W + FDPLG S+ I + +LRE+ELKHGR+CMLA+ G+IVQ+V+
Sbjct: 56 FLERPPALDGTWVGDVGFDPLGFSNIIDMRWLREAELKHGRVCMLAATGMIVQDVY---- 111
Query: 303 SYFPKIIPPIAA------HDHYLQTG-MAQLLIFIGAFEAISYYAIKQTLAG-NRAPGDF 458
FP + A HD ++ G M QLL+++G E + AI Q L G +R PGDF
Sbjct: 112 -QFPGVTKTFGAAKMTALHDAAVKQGAMQQLLLWLGFIEIFGFVAIVQMLQGSDRQPGDF 170
Query: 459 NFDPLNLGKDPSKRAHYEKAEIKN 530
FDPLN K+P+ A + E+KN
Sbjct: 171 GFDPLNCAKNPNALARRQLVELKN 194
[15][TOP]
>UniRef100_Q9FEM1 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9FEM1_GALSU
Length = 227
Score = 112 bits (279), Expect = 2e-23
Identities = 70/176 (39%), Positives = 88/176 (50%), Gaps = 6/176 (3%)
Frame = +3
Query: 21 AFLGAAVPRATSARATSSVAVAPV-----RMMAEMSKSVPFLLKPKNLDG-WAANAEFDP 182
+F + R S+ T+ V + S+++PFL P +LDG + FDP
Sbjct: 20 SFYSRVISRPLSSHRTTVVKTFRIIAGSSSTSGRQSRAIPFLKAPPSLDGSMVGDVGFDP 79
Query: 183 LGISDYIPVAYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIPPIAAHDHYLQTG 362
LG S I + YLRESELKH RI MLA VG IVQE G F P+ A G
Sbjct: 80 LGFSSIIDLRYLRESELKHCRIAMLAVVGFIVQEFIHLPGDVFSNP-HPMQAIGQVPVAG 138
Query: 363 MAQLLIFIGAFEAISYYAIKQTLAGNRAPGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
Q+ + + E I AIK+TL GNR PG F FDPL L KD Y +E+KN
Sbjct: 139 WVQIFLLVAILEMIDIAAIKETLQGNREPGYFGFDPLGLAKDKQAHDRYLLSELKN 194
[16][TOP]
>UniRef100_A8KCR8 Light harvesting complex protein 10 n=1 Tax=Guillardia theta
RepID=A8KCR8_GUITH
Length = 257
Score = 112 bits (279), Expect = 2e-23
Identities = 81/193 (41%), Positives = 107/193 (55%), Gaps = 19/193 (9%)
Frame = +3
Query: 9 VGTRAFLGAAVPRATSARATS-SVAVAPVRMMAEMSKSVPFLLKPKNLDG-WAANAEFDP 182
V AFL A P SA A + S A++ + M A SK +P+L P LDG + FDP
Sbjct: 12 VTATAFL--AGPALPSAHAPARSNAISSMSMQAR-SKPLPWLEAPPALDGKMEGDVGFDP 68
Query: 183 LGISDYIP----VAYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKII---PPIAAH 341
L +S +P + +LRE+ELKHGR+ MLA+ G IVQ++FT+ G K+I +AH
Sbjct: 69 LWVSSMLPDAGWIKFLREAELKHGRVAMLAATGAIVQDIFTFPG--VDKVIGAAKMTSAH 126
Query: 342 DHYLQ--------TGMAQLLIFIGAFEAISYYAIKQTLAG--NRAPGDFNFDPLNLGKDP 491
D YL M Q+L++IG E +S AI QT G +RAPGDF FDPL KD
Sbjct: 127 DKYLSLEIGGSKVATMHQMLLWIGLLEILSAPAIVQTFKGETSRAPGDFGFDPLGFSKDA 186
Query: 492 SKRAHYEKAEIKN 530
+ Y E+KN
Sbjct: 187 KSASTYRLKEVKN 199
[17][TOP]
>UniRef100_A8KCP1 Light harvesting complex protein 4 (Fragment) n=1 Tax=Guillardia
theta RepID=A8KCP1_GUITH
Length = 232
Score = 111 bits (278), Expect = 3e-23
Identities = 70/169 (41%), Positives = 99/169 (58%), Gaps = 11/169 (6%)
Frame = +3
Query: 51 TSARATSSVAVAPVRMMAEMS------KSVPFLLKPKNLDG-WAANAEFDPLGISDYIPV 209
TSA ++ S A+ ++M + +S K++PFL +P+ LDG + FDPLGIS Y +
Sbjct: 15 TSAVSSRSNAITGMKMQSVLSNRAGKSKAMPFLSQPEKLDGSMPGDVGFDPLGISTYFDL 74
Query: 210 AYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIPPIAAHDHYLQTGMAQLLIFIG 389
++RE+ELKHGRICMLA G +VQEV G F K + + A + GM +L+ IG
Sbjct: 75 KWMREAELKHGRICMLAWTGCLVQEVIHLPGEAFSKKL-ALDAWASAPRGGMISILVAIG 133
Query: 390 AFEAIS--YYAIKQTLAGN--RAPGDFNFDPLNLGKDPSKRAHYEKAEI 524
E IS + + N R PGD FDPL+LG +P+ RA YE +E+
Sbjct: 134 LIEMISNRFQLTATDMFANPARVPGDLGFDPLSLGNNPATRAKYELSEV 182
[18][TOP]
>UniRef100_Q5K274 Light harvesting protein 6 (Fragment) n=1 Tax=Guillardia theta
RepID=Q5K274_GUITH
Length = 213
Score = 110 bits (275), Expect = 6e-23
Identities = 76/182 (41%), Positives = 102/182 (56%), Gaps = 19/182 (10%)
Frame = +3
Query: 42 PRATSARATS-SVAVAPVRMMAEMSKSVPFLLKPKNLDG-WAANAEFDPLGISDYIP--- 206
P SA A + S A++ + M A SK +P+L P LDG + FDPL +S +P
Sbjct: 1 PALPSAHAPARSNAISSMSMQAR-SKPLPWLEAPPALDGKMEGDVGFDPLWVSSMLPDAG 59
Query: 207 -VAYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKII---PPIAAHDHYLQ------ 356
+ +LRE+ELKHGR+ MLA+ G IVQ++FT+ G K+I +AHD YL
Sbjct: 60 WIKFLREAELKHGRVAMLAATGAIVQDIFTFPG--VDKVIGAAKMTSAHDKYLSLEIGGS 117
Query: 357 --TGMAQLLIFIGAFEAISYYAIKQTLAG--NRAPGDFNFDPLNLGKDPSKRAHYEKAEI 524
M Q+L++IG E +S AI QT G +RAPGDF FDPL KD + Y E+
Sbjct: 118 KVATMHQMLLWIGLLEILSDPAIVQTFKGETSRAPGDFGFDPLGFSKDAKSASTYRLKEV 177
Query: 525 KN 530
KN
Sbjct: 178 KN 179
[19][TOP]
>UniRef100_A8KCN4 Light harvesting complex protein 2 n=1 Tax=Guillardia theta
RepID=A8KCN4_GUITH
Length = 215
Score = 109 bits (273), Expect = 1e-22
Identities = 70/180 (38%), Positives = 97/180 (53%), Gaps = 4/180 (2%)
Frame = +3
Query: 3 ASVGTRAFLGAAVPRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLDG-WAANAEFD 179
A+ AF AA+P + +T + M + S +VPFL +P LDG A + FD
Sbjct: 10 AAASASAFAPAALPTRAARSSTQGLK------MQDRSYAVPFLSRPPALDGTMAGDVGFD 63
Query: 180 PLGISDYIPVAYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIPPIAAHDHYLQT 359
PLG S+Y + +LRE+ELKHGR+CML ++G +VQE F F + + PI A
Sbjct: 64 PLGFSNYFDLKWLREAELKHGRVCMLGTLGFLVQEKFQLPLPGFGEKL-PIEAFFTVPTG 122
Query: 360 GMAQLLIFIGAFEAIS---YYAIKQTLAGNRAPGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
G+ Q+ +GA E +S + A RAPGD FDPLNL D S +E AE+K+
Sbjct: 123 GLWQIFFTLGAIEILSNNGRISPGDMFADGRAPGDLGFDPLNLSSDESALRRFELAELKH 182
[20][TOP]
>UniRef100_Q5K278 Light harvesting protein 5 (Fragment) n=1 Tax=Guillardia theta
RepID=Q5K278_GUITH
Length = 225
Score = 108 bits (271), Expect = 2e-22
Identities = 67/145 (46%), Positives = 90/145 (62%), Gaps = 7/145 (4%)
Frame = +3
Query: 117 SVPFLLKPKN--LDG-WAANAEFDPLGISDYIPVAYLRESELKHGRICMLASVGLIVQEV 287
++PF +P DG WA + FDPL IS ++ + +LRE+ELKH R+ MLA G I Q++
Sbjct: 53 AIPFAGRPNTPAFDGTWAGDVGFDPLTISGWLDIKWLREAELKHCRVAMLAVAGCIAQDL 112
Query: 288 FTWGG--SYFPKIIPPIAAHDHYLQTG-MAQLLIFIGAFEAISYYAIKQTLAGN-RAPGD 455
F + G + + + HD L+TG M Q+L ++G+FEAIS A+ Q L G+ R PGD
Sbjct: 113 FRFPGAETVYSSDLKLTKLHDAALKTGTMGQMLFWLGSFEAISTAAVIQMLQGSGRKPGD 172
Query: 456 FNFDPLNLGKDPSKRAHYEKAEIKN 530
F FDPL LGK RA E AEIKN
Sbjct: 173 FGFDPLGLGKG-GDRARLELAEIKN 196
[21][TOP]
>UniRef100_P93450 Light-harvesting complex I polypeptide n=1 Tax=Porphyridium
purpureum RepID=P93450_PORCR
Length = 203
Score = 107 bits (266), Expect = 7e-22
Identities = 69/174 (39%), Positives = 96/174 (55%), Gaps = 7/174 (4%)
Frame = +3
Query: 30 GAAVPRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLDGW-AANAEFDPLGISDYIP 206
G + RA++ R++ A V MMA+ SK++PFL P LDG + FDPLG+S +
Sbjct: 7 GFGLARASAGRSSVCSKNAHVTMMAK-SKAIPFLEAPAKLDGTLVGDVGFDPLGLSATLD 65
Query: 207 VAYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIPPIAAHDHYLQ------TGMA 368
V YLR +ELKHGRI MLA++G +VQE+ PK P D +L G
Sbjct: 66 VKYLRAAELKHGRIAMLAALGFVVQEILA------PKQSGPFTEPDPFLAIYKVPVEGWY 119
Query: 369 QLLIFIGAFEAISYYAIKQTLAGNRAPGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
Q++ I E +++ K+ G+ PG+F FDPL LGKD S Y +E+KN
Sbjct: 120 QIIAAISLVELVTF---KENYDGSAEPGNFGFDPLGLGKDKSVFDKYALSELKN 170
[22][TOP]
>UniRef100_Q5K281 Light harvesting complex protein (Fragment) n=1 Tax=Guillardia
theta RepID=Q5K281_GUITH
Length = 235
Score = 106 bits (265), Expect = 9e-22
Identities = 69/169 (40%), Positives = 98/169 (57%), Gaps = 11/169 (6%)
Frame = +3
Query: 51 TSARATSSVAVAPVRMMAEMS------KSVPFLLKPKNLDG-WAANAEFDPLGISDYIPV 209
TSA ++ S A+ ++M + +S K++PFL +P+ LDG + FDPLGIS Y +
Sbjct: 18 TSAVSSRSNAITGMKMQSVLSNRAGKSKAMPFLSQPEKLDGSMPGDVGFDPLGISTYFDL 77
Query: 210 AYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIPPIAAHDHYLQTGMAQLLIFIG 389
++RE+ELKHGRICMLA G +VQEV S K + + A + GM +L+ IG
Sbjct: 78 KWMREAELKHGRICMLAWTGCLVQEVIHLPESAEAKKL-ALDAWASAPRGGMISILVAIG 136
Query: 390 AFEAIS--YYAIKQTLAGN--RAPGDFNFDPLNLGKDPSKRAHYEKAEI 524
E IS + + N R PGD FDPL+LG +P+ RA YE +E+
Sbjct: 137 LIEMISNRFQLTATDMFANPARVPGDLGFDPLSLGNNPATRAKYELSEV 185
[23][TOP]
>UniRef100_Q4GWU4 Light-harvesting complex protein Lhcc5 n=1 Tax=Rhodomonas sp. CS24
RepID=Q4GWU4_RHDS2
Length = 255
Score = 106 bits (265), Expect = 9e-22
Identities = 76/190 (40%), Positives = 106/190 (55%), Gaps = 20/190 (10%)
Frame = +3
Query: 21 AFLGAAVPRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLD-GWAANAEFDPLGISD 197
AF+ +P A AR T++ A++ +RM + S ++P+L P LD FDPL +S
Sbjct: 16 AFVAPVLPSAGVAR-TNANAMSSMRMQKK-SAAMPWLDAPPALDESMTGYVGFDPLWVSS 73
Query: 198 YIP----VAYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIPPI------AAHDH 347
+P V +L+E+E+KHGR+ MLA+ G IVQ++FT FP + I HD
Sbjct: 74 MLPDPGYVKFLQEAEIKHGRVAMLAATGAIVQDIFT-----FPGVTSVIGNAKMTGVHDK 128
Query: 348 YL--------QTGMAQLLIFIGAFEAISYYAIKQTL-AGNRAPGDFNFDPLNLGKDPSKR 500
+L Q M QLL+++G FE + AI QT G+RAPGDF FDPL GK P+
Sbjct: 129 FLSMEGKGGNQAAMHQLLLWLGLFEIFTAVAIVQTFNGGDRAPGDFGFDPLGFGK-PNAI 187
Query: 501 AHYEKAEIKN 530
Y+ EIKN
Sbjct: 188 ETYKLKEIKN 197
[24][TOP]
>UniRef100_Q9FEL9 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9FEL9_GALSU
Length = 220
Score = 106 bits (264), Expect = 1e-21
Identities = 66/147 (44%), Positives = 87/147 (59%), Gaps = 3/147 (2%)
Frame = +3
Query: 99 MAEMSKSVPFLLKPKNLDG-WAANAEFDPLGISDYIPVAYLRESELKHGRICMLASVGLI 275
+ + SK++PFL +P LDG + FDPL IS Y+ + +LRESELKH RI MLA VG
Sbjct: 42 LPQKSKAIPFLDRPPALDGSMVGDVGFDPLNISSYLDLRWLRESELKHCRIAMLAVVGWF 101
Query: 276 VQEVFTWGGSYFPKIIPPIAAHDHYLQTG-MAQLLIFIGAFEAISYYAIKQTLAGN-RAP 449
VQEVF + P A L TG M Q++++ FE IS A+ Q L G+ R P
Sbjct: 102 VQEVFHLPNQIY-SASDPTEAFWKTLATGPMGQIVLWTSFFEIISTPAVIQMLQGSGREP 160
Query: 450 GDFNFDPLNLGKDPSKRAHYEKAEIKN 530
G F FDPL LGK+P ++ +E+KN
Sbjct: 161 GYFGFDPLGLGKNPQLYKRFQLSELKN 187
[25][TOP]
>UniRef100_Q8RW55 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q8RW55_GALSU
Length = 220
Score = 106 bits (264), Expect = 1e-21
Identities = 68/151 (45%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Frame = +3
Query: 99 MAEMSKSVPFLLKPKNLDG-WAANAEFDPLGISDYIPVAYLRESELKHGRICMLASVGLI 275
+ + SK++PFL +P LDG + FDPL IS Y+ + +LRESELKH RI MLA VG
Sbjct: 42 LPQKSKAIPFLDRPPALDGSMVGDVGFDPLNISSYLDLRWLRESELKHCRIAMLAVVGWF 101
Query: 276 VQEVFTWGGSYFPKII----PPIAAHDHYLQTG-MAQLLIFIGAFEAISYYAIKQTLAGN 440
VQEVF + P I P A L TG M Q++++ FE IS A+ Q L G+
Sbjct: 102 VQEVF-----HLPNXIYSASDPTEAFWKTLATGPMGQIVLWTSFFEIISTPAVIQMLQGS 156
Query: 441 -RAPGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
R PG F FDPL LGK+P ++ +E+KN
Sbjct: 157 GREPGYFGFDPLGLGKNPQLYKRFQLSELKN 187
[26][TOP]
>UniRef100_B8C0K3 Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8C0K3_THAPS
Length = 203
Score = 105 bits (261), Expect = 3e-21
Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Frame = +3
Query: 36 AVPRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLDGWAANAEFDPLGISDYIPVAY 215
A+ +TSA S V +AE S S+PFL P NLDG + FDP SD++P+ +
Sbjct: 9 ALVGSTSAFTAPSTGARAVTSLAEKSASLPFLEAPPNLDGGVGDLGFDPFRFSDFVPIDF 68
Query: 216 LRESELKHGRICMLASVGLIVQEVFTWGGSYFP-----KIIPPIAAHDHYL-QTGMAQLL 377
LRE+ELKHGRICM+A +G + ++ G +P + + I AHD + Q GM+Q+L
Sbjct: 69 LREAELKHGRICMMAWLGFVAVDM---GFRVYPAAEGFESLTSITAHDAAVEQGGMSQML 125
Query: 378 IFIGAFEAISYYAIKQTLAGN-RAPGDFNFD 467
++ E A++Q L G+ RAPGDF D
Sbjct: 126 LWFSLLEVFDTIAVQQMLEGSGRAPGDFGLD 156
[27][TOP]
>UniRef100_B7FQE0 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FQE0_PHATR
Length = 202
Score = 104 bits (260), Expect = 3e-21
Identities = 72/169 (42%), Positives = 91/169 (53%), Gaps = 8/169 (4%)
Frame = +3
Query: 48 ATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLDGWAAN-AEFDPLGISDYIPVAYLRE 224
A A A+ A V + AE S ++PFL P+NL G+ + FDPLG SDY P+ YLRE
Sbjct: 14 AAFAPASQGAGKASVALNAEKSPAMPFLPYPENLKGYIGDDIGFDPLGFSDYFPMDYLRE 73
Query: 225 SELKHGRICMLASVGLIVQE----VFTWGGSYFPKIIPPIAAHDHYLQTG-MAQLLIFIG 389
SE+KHGRICMLA VG I + V +G + AHD L+ G M LI+IG
Sbjct: 74 SEIKHGRICMLAVVGYIATDLGIIVHPYGSG-----LTSATAHDALLEKGVMGNALIWIG 128
Query: 390 AFEAISYYAIKQTLAGN-RAPGDFNFDPLNL-GKDPSKRAHYEKAEIKN 530
A E +SY A + L G+ R PG F F L GK + + EI N
Sbjct: 129 ALEMVSYIATAEMLQGSGREPGYFGFGTKYLDGKSAEQIKKIKYQEIMN 177
[28][TOP]
>UniRef100_Q9FEM0 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9FEM0_GALSU
Length = 219
Score = 99.8 bits (247), Expect = 1e-19
Identities = 62/142 (43%), Positives = 82/142 (57%), Gaps = 1/142 (0%)
Frame = +3
Query: 108 MSKSVPFLLKPKNLD-GWAANAEFDPLGISDYIPVAYLRESELKHGRICMLASVGLIVQE 284
MSK++PF KP+ LD A FDPLG SD V +L+E+E+KH RICMLA++G + E
Sbjct: 43 MSKAIPFFPKPERLDESMPGYAGFDPLGFSDKFDVKFLQEAEIKHCRICMLAALGWVFPE 102
Query: 285 VFTWGGSYFPKIIPPIAAHDHYLQTGMAQLLIFIGAFEAISYYAIKQTLAGNRAPGDFNF 464
+ F P+AA + G+ Q+L+ + A EAIS K + PGDF F
Sbjct: 103 FWHLPSEVFSN-TSPLAALGQVPKFGLIQILLLVVALEAIS--LDKLEFHPEKEPGDFGF 159
Query: 465 DPLNLGKDPSKRAHYEKAEIKN 530
DPL LGK SK+ + AEIKN
Sbjct: 160 DPLGLGKGKSKK-WMQTAEIKN 180
[29][TOP]
>UniRef100_B8C0K4 Fucoxanthin chlorophyll a/c light-harvesting protein, lhcr type n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C0K4_THAPS
Length = 203
Score = 98.2 bits (243), Expect = 3e-19
Identities = 63/181 (34%), Positives = 96/181 (53%), Gaps = 7/181 (3%)
Frame = +3
Query: 9 VGTRAFLGAAVPRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLDGWAANAEFDPLG 188
+ + A AA A++ RA +S+ + SK++P+L P NLDG FDPLG
Sbjct: 7 IASLACSAAAFAPASNGRAATSLEASA------KSKALPWLPNPSNLDGRIGANGFDPLG 60
Query: 189 ISDYIPVAYLRESELKHGRICMLASVGLIVQEVFTWGGSYFP-----KIIPPIAAHDHYL 353
IS+Y PV YL ESE+KHGR+CM+A G + ++ G +P + + AHD +
Sbjct: 61 ISEYFPVDYLVESEIKHGRVCMMAWAGYVAVDL---GARIYPLPESMQGVTSATAHDPAV 117
Query: 354 QTG-MAQLLIFIGAFEAISYYAIKQTLAGN-RAPGDFNFDPLNLGKDPSKRAHYEKAEIK 527
G M + I+I FE + + + QTL G+ R PGDF + +GK ++ + E+
Sbjct: 118 AFGSMGNMFIWIALFEMVGWIGLSQTLQGSGREPGDFGWGKQFMGKTQAEIDTMKLKELT 177
Query: 528 N 530
N
Sbjct: 178 N 178
[30][TOP]
>UniRef100_Q7XY92 Light-harvest protein (Fragment) n=1 Tax=Griffithsia japonica
RepID=Q7XY92_GRIJA
Length = 206
Score = 97.8 bits (242), Expect = 4e-19
Identities = 69/178 (38%), Positives = 88/178 (49%), Gaps = 5/178 (2%)
Frame = +3
Query: 12 GTR----AFLGAAVPRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLDG-WAANAEF 176
GTR AF GAAV RA A A R + S SVPFL +P LDG + F
Sbjct: 1 GTRIARTAFAGAAVSRAA--------APAKARFSMDASASVPFLERPPKLDGSLPGDVGF 52
Query: 177 DPLGISDYIPVAYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIPPIAAHDHYLQ 356
DP G S+ + +LRE+ELKHGRICMLA +G + E+ + P+ A
Sbjct: 53 DPCGFSNAFELNFLREAELKHGRICMLAILGWVFPELVGHLPNEAYSATNPLYAVGSVGW 112
Query: 357 TGMAQLLIFIGAFEAISYYAIKQTLAGNRAPGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
+ Q+L FI EA + N PG++ FDP L +P + HYE AEIKN
Sbjct: 113 LPIIQILAFIAICEAKGVAKVYDENCAN--PGNYGFDPFGLTANPKTKQHYELAEIKN 168
[31][TOP]
>UniRef100_Q2IA66 Chloroplast light harvesting protein isoform 13 n=1 Tax=Isochrysis
galbana RepID=Q2IA66_ISOGA
Length = 211
Score = 94.7 bits (234), Expect = 3e-18
Identities = 69/182 (37%), Positives = 94/182 (51%), Gaps = 7/182 (3%)
Frame = +3
Query: 6 SVGTRAFLGAAVPRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLDGWAANAE--FD 179
++G +F AA+P A +S V +A +A SK+VPFL P A AE FD
Sbjct: 6 TLGPLSFSPAAMP-AVQVTRSSGVNMA----IANPSKAVPFLSAPPCQSSKLAGAETGFD 60
Query: 180 PLGISDYIPVAYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIP-PIAAHDHYLQ 356
PL +S+YI + + RE+ELKHGRICMLA+ G QE G FP P I A
Sbjct: 61 PLYLSEYIDIKWAREAELKHGRICMLAATGYFFQEFLALPG--FPGYTPNGIEAATSVSP 118
Query: 357 TGMAQLLIFIGAFEAIS----YYAIKQTLAGNRAPGDFNFDPLNLGKDPSKRAHYEKAEI 524
+AQ+++F+ E S + R PG+ FDPL+ G + + RA E AE+
Sbjct: 119 ESLAQIVLFMSVVEYNSNLNKWTQDTMFTDPKREPGNLGFDPLHFGDNKASRARLEMAEL 178
Query: 525 KN 530
KN
Sbjct: 179 KN 180
[32][TOP]
>UniRef100_B7FUM6 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FUM6_PHATR
Length = 200
Score = 94.4 bits (233), Expect = 5e-18
Identities = 64/181 (35%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Frame = +3
Query: 21 AFLGAAVPRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLDGWAANAEFDPLGISDY 200
A A P A A +TS+ + AEMSKS+PFL PKN G+ + FDPLG SD
Sbjct: 11 ASAAAFAPAAKPAASTSA-------LNAEMSKSMPFLTAPKNTGGYVGDVGFDPLGFSDN 63
Query: 201 IPVAYLRESELKHGRICMLASVGLIVQEVFTWGGSYF--PKIIPPIAAHDHYLQTGMAQL 374
+ +LRESE+KHGR MLA+VG ++Q+ +T G + P AA G++ +
Sbjct: 64 FDMKWLRESEIKHGRAAMLATVGFVMQQFWTLPGMVHVDDSNLAPGAA-------GISPM 116
Query: 375 LIFIGAFEAISYYAIKQTLA-------GNRAPGDFNFDPLNLGKDPSKR--AHYEKAEIK 527
L + A+ ++ K + +R PG+ FDP+ + K+ SK + EIK
Sbjct: 117 LQIVFGMGALEWWTNKGKVTMEDMFSDSSREPGNLGFDPMGMSKNKSKEEAEAMQLKEIK 176
Query: 528 N 530
N
Sbjct: 177 N 177
[33][TOP]
>UniRef100_B7FQE1 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FQE1_PHATR
Length = 215
Score = 94.0 bits (232), Expect = 6e-18
Identities = 59/167 (35%), Positives = 89/167 (53%), Gaps = 11/167 (6%)
Frame = +3
Query: 21 AFLGAAVPRATSARATSSV----AVAPVRMMAEMSKSVPFLLKPKNLDGWAANAEFDPLG 188
A A P + + R+ + + A A S+S+PF+ P NL G+ +A FDP
Sbjct: 11 ASAAAFAPASNNGRSATMLFEDAAAAEPEAKYVASESLPFMEYPPNLKGYVGDAGFDPFR 70
Query: 189 ISDYIPVAYLRESELKHGRICMLASVGLIVQEVFTWGGSYFP-----KIIPPIAAHDHYL 353
SD++P+ +LRE+ELKHGRICM+A+ G ++ G +P + + + AHD +
Sbjct: 71 FSDFLPMDFLREAELKHGRICMMATAGFAAVDL---GLRVYPLPEGYEGLTSVTAHDALV 127
Query: 354 -QTGMAQLLIFIGAFEAISYYAIKQTLAGN-RAPGDFNFDPLNLGKD 488
Q GM Q+L++ E A+ Q L G+ R PGDF FDP K+
Sbjct: 128 KQGGMGQMLLWFSFLEIFDTVAVIQMLNGSGRRPGDFGFDPAGFLKN 174
[34][TOP]
>UniRef100_Q2IA65 Chloroplast light harvesting protein isoform 14 n=1 Tax=Isochrysis
galbana RepID=Q2IA65_ISOGA
Length = 193
Score = 91.7 bits (226), Expect = 3e-17
Identities = 60/151 (39%), Positives = 88/151 (58%), Gaps = 9/151 (5%)
Frame = +3
Query: 45 RATSARATSSVAVAPVRMMAEM---SKSVPFLLKPKNLDG-WAANAEFDPLGISDYIPVA 212
++ S A + A RM A + S+++PFL P LDG A + FDPL ++ +
Sbjct: 7 QSLSLNAGMAPAARVQRMQAPVMIKSQALPFLEAPAKLDGSMAGDRGFDPLNLAGSFNLN 66
Query: 213 YLRESELKHGRICMLASVGLIVQEVFTWGGSYFP--KIIPPIAAHDHYLQTG-MAQLLIF 383
Y+RE+ELKHGRICMLA VG + + G Y P + +AAHD +++G M LL
Sbjct: 67 YMREAELKHGRICMLAWVGYVAVD----NGFYVPFAPHVSSLAAHDTAVKSGNMLLLLGA 122
Query: 384 IGAFEAISYYAIKQTLAG--NRAPGDFNFDP 470
+G EA+SY A+ + ++G +R PGDF+ DP
Sbjct: 123 VGVIEALSYNAVNEMMSGQTDRRPGDFSMDP 153
[35][TOP]
>UniRef100_B8C8Q0 Fucoxanthin chl a/c light-harvesting protein, lhcr type n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C8Q0_THAPS
Length = 204
Score = 89.7 bits (221), Expect = 1e-16
Identities = 67/186 (36%), Positives = 89/186 (47%), Gaps = 25/186 (13%)
Frame = +3
Query: 48 ATSARATSSVAVAPVR-------MMAEMSKSVPFLLKPKNLDGWAANAEFDPLGISDYIP 206
A A A SS A APV + AEMSK++PFL+ P N DG + FDPLG SD
Sbjct: 6 ALLALAGSSAAFAPVNNGKAATALNAEMSKAMPFLINPANTDGLIGSNGFDPLGFSDTFD 65
Query: 207 VAYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIPPIAAHDHYLQTGMAQLLIFI 386
+ +L+ESE+KHGR+ MLAS G I + + P+ + H + MA ++ I
Sbjct: 66 IKWLQESEIKHGRVAMLASAGFIASQFVNF----------PMYSSMHVDDSNMAPTVVGI 115
Query: 387 GAF---------EAISYYAIKQTL-------AGNRAPGDFNFDPLNLGKDPSKRAHYEK- 515
A E Y + T+ +R PGDF FDP+ K S+ A E
Sbjct: 116 SAMLQIVCAAGVEEWRTYKGQVTMEDMFTGDMADRTPGDFGFDPMGQLKGKSEAAVNEMK 175
Query: 516 -AEIKN 530
EIKN
Sbjct: 176 LKEIKN 181
[36][TOP]
>UniRef100_Q7XYZ2 Light-harvesting complex I polypeptide (Fragment) n=1
Tax=Griffithsia japonica RepID=Q7XYZ2_GRIJA
Length = 168
Score = 88.2 bits (217), Expect = 3e-16
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 1/148 (0%)
Frame = +3
Query: 90 VRMMAEMSKSVPFLLKPKNLDGW-AANAEFDPLGISDYIPVAYLRESELKHGRICMLASV 266
VRM A S+SVPFL KP LDG + FDPL +SDYI + Y +E+KHGRICMLA++
Sbjct: 1 VRMAA--SESVPFLEKPSKLDGTRVGDTGFDPLYLSDYIDLDYAAAAEIKHGRICMLATL 58
Query: 267 GLIVQEVFTWGGSYFPKIIPPIAAHDHYLQTGMAQLLIFIGAFEAISYYAIKQTLAGNRA 446
G++VQEV + F + P A + ++ G Q++ I E S+ A +T A
Sbjct: 59 GMLVQEVVHLPNAAFSEPNPLKAIYAVPIE-GWVQIITVICLVELASFKATYETGA---- 113
Query: 447 PGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
D FDP+ LG P K + E+KN
Sbjct: 114 --DLGFDPMGLG-TPDKIEELKLKEVKN 138
[37][TOP]
>UniRef100_Q7X8N6 Light-harvest protein n=1 Tax=Griffithsia japonica
RepID=Q7X8N6_GRIJA
Length = 217
Score = 85.1 bits (209), Expect = 3e-15
Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 9/154 (5%)
Frame = +3
Query: 45 RATSARATSSVAVAPVRM---MAEMSKSVPFLLKPKNL-DGWAANAEFDPLGISDYIPVA 212
R+ A S AVAP M+++S SVPFL KPKNL + FDPLG+S+ + +
Sbjct: 18 RSALCGAAVSAAVAPAPSAVSMSDLSPSVPFLPKPKNLSEDMVGYTGFDPLGLSNLVDIK 77
Query: 213 YLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIPPIA--AHDHYLQTGMAQLLIFI 386
+L+ESE+KHGR+CMLA G++ QE P+ P+A A + + Q+ +F
Sbjct: 78 WLQESEIKHGRVCMLAVAGILAQEFVHLPD---PRYANPLATEALNQVPSAALWQIFLFC 134
Query: 387 GAFEAISY---YAIKQTLAGNRAPGDFNFDPLNL 479
G E + + + + PG+ F+P+NL
Sbjct: 135 GLAEFVLHKGKISYVDMFSDGAVPGELGFNPMNL 168
[38][TOP]
>UniRef100_B8LE61 Photosystem I light harvesting protein (Fragment) n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LE61_THAPS
Length = 145
Score = 84.0 bits (206), Expect = 6e-15
Identities = 52/124 (41%), Positives = 71/124 (57%), Gaps = 5/124 (4%)
Frame = +3
Query: 174 FDPLGISDYIP--VAYLRESELKHGRICMLASVGLIVQEVFTWGGSYFP-KIIPPIA-AH 341
FDP G S+ P + + RE+ELKHGR MLA VG++V E G F + IP + AH
Sbjct: 1 FDPAGFSERAPEWINWFREAELKHGRQAMLAVVGMVVPEFVRIPGEAFSFEAIPNVLDAH 60
Query: 342 DHYLQTGMAQLLIFIGAFEAISYYAIKQTLAGNRAPGDFNFDPLN-LGKDPSKRAHYEKA 518
D L T M Q+L++I EA+S A+ +R PG+F FDPL + KD +K +
Sbjct: 61 DALLDTSMKQILLWISLMEAMSLGALSNMNEFDREPGNFGFDPLGMMPKDAAKAKEMQLK 120
Query: 519 EIKN 530
E+KN
Sbjct: 121 ELKN 124
[39][TOP]
>UniRef100_B7G502 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G502_PHATR
Length = 206
Score = 84.0 bits (206), Expect = 6e-15
Identities = 52/130 (40%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Frame = +3
Query: 153 GWAANAEFDPLGISDYIP--VAYLRESELKHGRICMLASVGLIVQE-VFTWGGSYFPKII 323
G + FDPLG+++ +P V + RESELKHGR MLA G +V E V G +Y I
Sbjct: 52 GKTGSKNFDPLGLTEKVPEWVPWFRESELKHGRAAMLAVAGFVVPEFVRVPGEAYSFAAI 111
Query: 324 PPIAAHDHYLQTGMAQLLIFIGAFEAISYYAIKQTLAGNRAPGDFNFDPLNL-GKDPSKR 500
P + L M Q+ +I EA+S+ A+ +R PGDF FDPL L KD +K+
Sbjct: 112 PNVIDAHDALPQAMIQIFAWISFVEAVSFPALANMNEFDRVPGDFGFDPLKLYPKDAAKQ 171
Query: 501 AHYEKAEIKN 530
+ E+KN
Sbjct: 172 EQMQLKELKN 181
[40][TOP]
>UniRef100_B7G9B9 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G9B9_PHATR
Length = 216
Score = 82.4 bits (202), Expect = 2e-14
Identities = 63/182 (34%), Positives = 89/182 (48%), Gaps = 22/182 (12%)
Frame = +3
Query: 51 TSARATSSVAVAPVR--------MMAEMSKSVPFLLKPKNLDG-WAANAEFDPLGISDY- 200
T+ A S+ A AP + + AE SKS+PF+ +P LDG A + FDPLG+S
Sbjct: 8 TATLAASASAFAPAQSNTRVVTSLNAERSKSLPFMNRPDLLDGSMAGDVGFDPLGLSTIE 67
Query: 201 ---IPVAYLRESELKHGRICMLASVGLIVQEVF--------TWGGSYFPKIIPPIAAHDH 347
+ + +LRE+E+KH R+ M+A G++ E+F S AH
Sbjct: 68 GVGVDLYWLREAEIKHCRVAMMAVAGVLWVELFGPAPGCEMATAKSQTDAFWQLWQAHPQ 127
Query: 348 YLQTGMAQLLIFIGAFEAISYYAIKQTL-AGNRAPGDFNFDPLNLGKDPSKRAHYEKAEI 524
Y+ G I G E I+ AI +G RAPGDF DPL + +P+K Y E+
Sbjct: 128 YIAFGF----IMTGLVEMITGIAITTGRESGQRAPGDFGLDPLKIKNNPAKWEKYSLNEV 183
Query: 525 KN 530
KN
Sbjct: 184 KN 185
[41][TOP]
>UniRef100_Q9LKN9 Light-harvesting complex protein LHCC4 (Fragment) n=1
Tax=Guillardia theta RepID=Q9LKN9_GUITH
Length = 219
Score = 82.0 bits (201), Expect = 2e-14
Identities = 61/178 (34%), Positives = 92/178 (51%), Gaps = 12/178 (6%)
Frame = +3
Query: 33 AAVPRATSARATSSVAVAPVRMMAEMSKSV---PFLLKPKNLDGWAANAE-FDPLGISDY 200
A +PRAT A + ++ + + K V P +P +LDG A + FDP G S +
Sbjct: 20 AMLPRATRAARATGPSMQLYKDGSLQGKGVNIIPIFPRPASLDGTAVGDQGFDPFGFSSW 79
Query: 201 IPVAYLRESELKHGRICMLASVGLIVQEVFTWG---GSYFPKIIPPIAAHDHYLQTG-MA 368
+ + ++RE+E+KHGRI MLA G++V+ S F H+ ++ G M
Sbjct: 80 VNMKFVREAEIKHGRIAMLAFAGIMVEAAGIKAPGVESVFGPTKDIFEIHNLAVEKGSMG 139
Query: 369 QLLIFIGAFE-AISYYAIKQTL---AGNRAPGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
Q+L++ G E I + A+ + L + R PGDF FDPL LGK A + +EIKN
Sbjct: 140 QILLWTGFLEMVIGWPAMNEMLNDPSSKRIPGDFGFDPLGLGK--GSMARKQLSEIKN 195
[42][TOP]
>UniRef100_Q5ENM0 Chloroplast light harvesting complex protein (Fragment) n=1
Tax=Heterocapsa triquetra RepID=Q5ENM0_HETTR
Length = 166
Score = 81.6 bits (200), Expect = 3e-14
Identities = 46/105 (43%), Positives = 67/105 (63%), Gaps = 6/105 (5%)
Frame = +3
Query: 102 AEMSKSVPFLLKPKNLDGWAANAE-FDPLGISDYIPVAYLRESELKHGRICMLASVGLIV 278
+EMS +VPFL P L G+ + + FDPLG+SD +PV YLRESELKHGR+CMLA++G +
Sbjct: 50 SEMSPAVPFLNYPVPLKGYVGDEKGFDPLGVSDALPVYYLRESELKHGRVCMLATIGWMA 109
Query: 279 QEVFTWGGSYFP----KIIPPIAAHDHYLQTGMAQ-LLIFIGAFE 398
++ G FP + + + AHD ++ G+ Q L + A+E
Sbjct: 110 TDL----GVRFPGDQFQNVSTVGAHDKMVELGLMQPFLATVAAYE 150
[43][TOP]
>UniRef100_B3VBH6 Light harvesting complex protein (Fragment) n=1 Tax=Vaucheria
litorea RepID=B3VBH6_VAULI
Length = 105
Score = 79.0 bits (193), Expect = 2e-13
Identities = 46/103 (44%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Frame = +3
Query: 237 HGRICMLASVGLIVQEVFTWGGSYFP---KIIPPIAAHDHYLQTG-MAQLLIFIGAFEAI 404
HGRICMLA G IV ++ G + P ++ + AHD+ ++ G M+Q+L+++ FEA+
Sbjct: 1 HGRICMLAVAGWIVVDL----GLHLPGDVHLVDSLTAHDNAVRFGAMSQILLWVSMFEAV 56
Query: 405 SYYAIKQTLAGN-RAPGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
S A+ Q L G+ R PG+F FDPL DPSKRA EIKN
Sbjct: 57 SSVAVFQMLNGSGRKPGEFGFDPLKFASDPSKRAKLALNEIKN 99
[44][TOP]
>UniRef100_Q7XY90 Light-harvest protein n=1 Tax=Griffithsia japonica
RepID=Q7XY90_GRIJA
Length = 213
Score = 75.1 bits (183), Expect = 3e-12
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 6/173 (3%)
Frame = +3
Query: 30 GAAVPRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNL-DGWAANAEFDPLGISDYIP 206
GA++ A A A ++V+ M+E S SVPFL KP+NL D FDPL + +
Sbjct: 18 GASLSVAPRASAPATVS------MSERSASVPFLKKPENLPDTLIGYTGFDPLNFTGRVD 71
Query: 207 VAYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIPPIAAHDHYL--QTGMAQLLI 380
+++E+E+KHGR+ MLA +G++VQE F P+A + G+ Q+ +
Sbjct: 72 YRWMQEAEIKHGRVSMLAVLGMLVQEFIHLPAKGFEN---PLATEAFFQVPSAGLFQIFL 128
Query: 381 FIGAFEAISY---YAIKQTLAGNRAPGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
F G E + + + PG+ F+P+NL S R EIKN
Sbjct: 129 FCGFAELYLHKGKLSPSDMFSDGATPGELGFNPMNLDVSDSLRL----KEIKN 177
[45][TOP]
>UniRef100_B8C2K6 Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8C2K6_THAPS
Length = 198
Score = 74.7 bits (182), Expect = 4e-12
Identities = 61/160 (38%), Positives = 82/160 (51%), Gaps = 4/160 (2%)
Frame = +3
Query: 18 RAFLGAAVPRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLDG-WAANAEFDPLGIS 194
+A L ++ A SA A +SV + V + EMSKS+PFL P+ LDG A + FDP+G+S
Sbjct: 3 KAVLTTSLIAAASAFAPASVGRSTVALN-EMSKSIPFLTVPEKLDGSMAGDVGFDPMGLS 61
Query: 195 DY-IPVAYLRESELKHGRICMLASVGLIVQEV--FTWGGSYFPKIIPPIAAHDHYLQTGM 365
D + Y R +ELKHGRICMLA VG++ QE G +Y K P A
Sbjct: 62 DIQTDLNYARWAELKHGRICMLAVVGMVWQEYGPHLPGDAYATK--DPWEAISSVGFASN 119
Query: 366 AQLLIFIGAFEAISYYAIKQTLAGNRAPGDFNFDPLNLGK 485
Q L+ IG E ++ G+ PGD + L K
Sbjct: 120 FQTLLAIGVVELANW----NKYYGDGTPGDIGWTGGQLSK 155
[46][TOP]
>UniRef100_Q5K250 Light harvesting complex 8 (Fragment) n=1 Tax=Guillardia theta
RepID=Q5K250_GUITH
Length = 155
Score = 72.8 bits (177), Expect = 1e-11
Identities = 44/122 (36%), Positives = 74/122 (60%), Gaps = 10/122 (8%)
Frame = +3
Query: 195 DYIPVAYLRESELKHGRICMLASVGLIVQEVF-------TWGGSYFPKIIPPIAAHDHYL 353
+++ + + RE+E+KHGR+ MLA+ G+IVQ+++ T+G + K+ H+ +
Sbjct: 1 NWLNLYWAREAEIKHGRVAMLAATGMIVQDLYKFPGVQKTFGDAAMMKL------HNLAV 54
Query: 354 QTG-MAQLLIFIGAFEAIS-YYAIKQTLAGN-RAPGDFNFDPLNLGKDPSKRAHYEKAEI 524
+ G M QLL+++G E ++ A+ Q L G+ R PGDF FDPL G++P A + E+
Sbjct: 55 EQGAMQQLLLWLGLLEILTGLPAVIQGLKGSERTPGDFGFDPLGCGRNPETLARRQLTEL 114
Query: 525 KN 530
KN
Sbjct: 115 KN 116
[47][TOP]
>UniRef100_B7FSP4 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FSP4_PHATR
Length = 199
Score = 72.8 bits (177), Expect = 1e-11
Identities = 63/172 (36%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Frame = +3
Query: 54 SARATSSVAVAPVRMMA-----------EMSKSVPFLLKPKNLDG-WAANAEFDPLGISD 197
+A S+ A AP M + EMSKS+PFL+KP LDG A + FDP+ +SD
Sbjct: 8 AALLASAAAFAPASMQSQRAGSVSLNAEEMSKSIPFLVKPDKLDGSMAGDMGFDPMRLSD 67
Query: 198 Y-IPVAYLRESELKHGRICMLASVGLIVQEV-FTWGGSYFPKIIPPIAAHDHYLQTGMAQ 371
+ Y R SE+KHGRICMLA VG++VQ+ G F A D Q
Sbjct: 68 IQTDLKYARWSEIKHGRICMLAIVGILVQQAGIHLPGEQFTN-TDIFGAVDSVGFGANMQ 126
Query: 372 LLIFIGAFEAISYYAIKQTLAGNRAPGDFNFDPLNL-GKDPSKRAHYEKAEI 524
+ IGA E ++ G PGD FD L G K A ++ EI
Sbjct: 127 IFAGIGAVEIATF----NKHYGEGEPGDLGFDGGQLKGASADKIALRKEQEI 174
[48][TOP]
>UniRef100_B8BYV3 Member of fucoxanthin chlorophyll a/c family, lhca clade n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BYV3_THAPS
Length = 219
Score = 72.4 bits (176), Expect = 2e-11
Identities = 62/176 (35%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Frame = +3
Query: 42 PRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLDG-WAANAEFDPLGISDY----IP 206
P A S R+++ + AE S+++PFL KP LDG A + FDPLG+S I
Sbjct: 19 PAANSVRSSA--------LNAEKSQAMPFLNKPALLDGSMAGDKGFDPLGLSTIDDVGID 70
Query: 207 VAYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIPPIAAHDHYLQTG------MA 368
+ +LRE+E+KH R+ MLA G + EVF G + ++ D + Q +A
Sbjct: 71 LYWLREAEIKHARVAMLAVAGALQVEVF--GPAPGCEMATAKCQTDAFWQIWSAHPQYIA 128
Query: 369 QLLIFIGAFEAIS-YYAIKQTLAGNRAPGDFNFDPLNL-GKDPSKRAHYEKAEIKN 530
L+ I EA+S A +G+RAPGDF DPL D +K + EI+N
Sbjct: 129 ASLVLITIVEAVSGIAATTGRESGDRAPGDFGLDPLGFCNGDVAKADRLKLQEIEN 184
[49][TOP]
>UniRef100_A8KCS2 Light harvesting complex protein 11 n=1 Tax=Guillardia theta
RepID=A8KCS2_GUITH
Length = 225
Score = 68.2 bits (165), Expect = 3e-10
Identities = 60/186 (32%), Positives = 86/186 (46%), Gaps = 10/186 (5%)
Frame = +3
Query: 3 ASVGTRAFLGAAVPRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLDG--WAANAE- 173
A +G A A P + RA + AV+ + M + L + +G WA N
Sbjct: 6 ALLGLAASAAAFAPSSLPIRANRASAVSKMSMQSNRFSYRSDGLPAWDSEGADWAVNGGL 65
Query: 174 FDPLGISDYIPVAYLRESELKHGRICMLASVGLIVQEVFTWGGSYFP------KIIPPIA 335
F +G V + RE+E+KHGRICMLA+ G IVQ+++ +FP K
Sbjct: 66 FGAVG-----DVIWAREAEIKHGRICMLAATGSIVQDLY-----HFPFIDKWYKGEKMWG 115
Query: 336 AHDHYLQTG-MAQLLIFIGAFEAISYYAIKQTLAGNRAPGDFNFDPLNLGKDPSKRAHYE 512
HD +++G + Q+L FIG E + +K GD FDPL L DP A +
Sbjct: 116 LHDAAIKSGALWQVLFFIGLLEL--PFLLKLANGTVDGTGDIGFDPLGLKNDPETFARRQ 173
Query: 513 KAEIKN 530
E+KN
Sbjct: 174 VTEVKN 179
[50][TOP]
>UniRef100_Q9LKN8 Light-harvesting complex protein LHCC10 (Fragment) n=1
Tax=Guillardia theta RepID=Q9LKN8_GUITH
Length = 224
Score = 67.8 bits (164), Expect = 5e-10
Identities = 60/182 (32%), Positives = 86/182 (47%), Gaps = 6/182 (3%)
Frame = +3
Query: 3 ASVGTRAFLGAAVPRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLDG--WAANAE- 173
A +G A A P + RA + AV+ + M + L + +G WA N
Sbjct: 5 ALLGLAASAAAFAPSSLPIRANRASAVSKMTMQSNRFSYRSDGLPQWDSEGADWAVNGGL 64
Query: 174 FDPLGISDYIPVAYLRESELKHGRICMLASVGLIVQEV--FTWGGSYFPKIIPPIAAHDH 347
F +G V + RE+E+KHGRICMLA+ G IVQ++ F + +F K HD
Sbjct: 65 FGAVG-----DVIWAREAEVKHGRICMLAATGSIVQDLYHFPFMDKWF-KGEKMWGLHDA 118
Query: 348 YLQTG-MAQLLIFIGAFEAISYYAIKQTLAGNRAPGDFNFDPLNLGKDPSKRAHYEKAEI 524
+++G + Q+L FIG E + +K GD FDPL L DP A + E+
Sbjct: 119 AIKSGALWQVLFFIGLLEL--PFLLKLANGTVDGTGDIGFDPLGLKNDPETFARRQVTEV 176
Query: 525 KN 530
KN
Sbjct: 177 KN 178
[51][TOP]
>UniRef100_B8LDJ7 Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8LDJ7_THAPS
Length = 222
Score = 67.0 bits (162), Expect = 8e-10
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Frame = +3
Query: 3 ASVGTRAFLGAAVPRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLDGW-AANAEFD 179
AS+ T A A P +T+ R T+++ EMSK++PF+ +PK LDG A + FD
Sbjct: 6 ASLVTSA--AAFAPASTNVRQTTTLTAEK-----EMSKALPFVPRPKLLDGTLAGDVGFD 58
Query: 180 PLGI--SDYIPVAYLRESELKHGRICMLASVGLIVQEVFTWGGSYF---PKIIPPIAAHD 344
P G +D + +RE+E+KH R+ MLA+VG + E F + F P + A
Sbjct: 59 PFGFGGADKESLISMREAEIKHSRLAMLAAVGWPLAEKFDGAIAQFLGLPSALTNSGASP 118
Query: 345 HYLQTGMAQL----LIFIGAFEAISYYAIKQTLAG---NRAPGDFNFDPLNL 479
L G+ ++ + + A ++ A +T PGD FDPL L
Sbjct: 119 SVLNGGLDKIEPDYWVIVAAIAGLAELANNETKTATGKKYTPGDCGFDPLGL 170
[52][TOP]
>UniRef100_B8BU33 Fucoxanthin chlorophyll a/c light-harvesting protein n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BU33_THAPS
Length = 252
Score = 67.0 bits (162), Expect = 8e-10
Identities = 56/189 (29%), Positives = 85/189 (44%), Gaps = 32/189 (16%)
Frame = +3
Query: 33 AAVPRATSARATSSVAVAPVRMMAEM------SKSVPFLLKPKNLDG-WAANAEFDPLGI 191
A P A +S+ P RM +M SK++PFL +P NLDG + + FDP +
Sbjct: 17 AFAPANNGAAVKTSLDAMPDRMWNKMVDKTQRSKAMPFLPRPINLDGSYVGDVGFDPFYL 76
Query: 192 SDY------------------IPVAY-LRESELKHGRICMLASVGLIVQEV---FTWGGS 305
S +P Y +RE+ELKHGRI M+A G + + F G
Sbjct: 77 SSIDKNFAGFIQPPSWEETNGLPTLYWMREAELKHGRIAMMAFAGWLATDFGVRFPGAGE 136
Query: 306 YFPKIIPPIAAHDHYLQTGMAQLLIFIGAFEAISYYAIKQTLA---GNRAPGDFNFDPLN 476
+ + +AH+ + +G +++ + F IS A+ ++ +R GDF FDPL
Sbjct: 137 PYTSVPNAFSAHNIMVDSGAMWVMLSLIGFIEISTAAVLVEVSKGENDREAGDFCFDPLG 196
Query: 477 LGKDPSKRA 503
K S A
Sbjct: 197 FCKGKSADA 205
[53][TOP]
>UniRef100_Q53IY6 Light-harvesting complex protein Lhcc4 n=1 Tax=Rhodomonas sp. CS24
RepID=Q53IY6_RHDS2
Length = 238
Score = 66.2 bits (160), Expect = 1e-09
Identities = 55/130 (42%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Frame = +3
Query: 156 WAANAEFDPLGISDYIPVAYLRESELKHGRICMLASVGLIVQEVFT---WGGSYFPKIIP 326
WA N GI + V + RE+E+KHGRI MLA+ GLIVQ++FT +G Y + +
Sbjct: 59 WAENG-----GIFGWPDVIWAREAEVKHGRIAMLAATGLIVQDLFTLPFYGKWYTGEKV- 112
Query: 327 PIAAHDHYLQTGMA-QLLIFIGAFE-AISYYAIKQTLAGNRAPGDFNFDPLNLGKDPSKR 500
A HD + G A Q+L+ IGA E I+ TL G GD+ FDPL+L D +R
Sbjct: 113 -WALHDKLVSVGAAWQVLLAIGALEFPFINKCIEGTLDGT---GDYGFDPLSLKSD--RR 166
Query: 501 AHYEKAEIKN 530
A EIKN
Sbjct: 167 A---VTEIKN 173
[54][TOP]
>UniRef100_B8LE60 Putative uncharacterized protein (Fragment) n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8LE60_THAPS
Length = 131
Score = 66.2 bits (160), Expect = 1e-09
Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Frame = +3
Query: 219 RESELKHGRICMLASVGLIVQE-VFTWGGSYFPKIIP-PIAAHDHYLQTGMAQLLIFIGA 392
RESE++HGR MLA G IVQ+ V G +Y + +P + AHD L+ M QLL++I
Sbjct: 1 RESEIRHGRTAMLAVTGFIVQDFVRIPGDAYSFEAVPKTVGAHDALLEGPMHQLLLWISL 60
Query: 393 FE-AISYYAIKQTLAGNRAPGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
++ I+Y +I+ T+ G R PGDF + L KD + YE E+ N
Sbjct: 61 WDIVITYPSIQATMKGEREPGDFGWKWL-APKDEATLKKYEMNELLN 106
[55][TOP]
>UniRef100_Q53IY4 Light-harvesting complex protein Lhcc2 n=1 Tax=Rhodomonas sp. CS24
RepID=Q53IY4_RHDS2
Length = 224
Score = 65.9 bits (159), Expect = 2e-09
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
Frame = +3
Query: 21 AFLGAAVPRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLDGWAANAE-FDPLGISD 197
AF A+P + R ++ + ++ + +N WA N F +G
Sbjct: 16 AFAPTALPTGLARRTAATASQVTMQSRFSYGGGTEW---DQNGADWAINGGLFGAVG--- 69
Query: 198 YIPVAYLRESELKHGRICMLASVGLIVQEVFTWG-GSYFPKIIPPIAAHDHYLQTG-MAQ 371
+ + RE+E+KHGRICMLA+ G +VQ+++T+ S + K H+ +++G M Q
Sbjct: 70 --DIVWAREAEVKHGRICMLAATGSLVQDLYTFPFMSKWYKGEKMWGLHEAAIKSGAMWQ 127
Query: 372 LLIFIGAFEAISYYAIKQTLAGNRAPGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
+L F+G E + +K GD FDPL L DP A + EIKN
Sbjct: 128 VLFFVGLLEI--PFMLKLANGSVDGTGDLGFDPLGLKNDPETFARRQVTEIKN 178
[56][TOP]
>UniRef100_B7G503 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G503_PHATR
Length = 198
Score = 65.9 bits (159), Expect = 2e-09
Identities = 60/164 (36%), Positives = 88/164 (53%), Gaps = 8/164 (4%)
Frame = +3
Query: 63 ATSSVAVAPV--RMMAEMSKSVPFLLKPKNLDGWAANAEFDPLGISD-YIP-VAYLRESE 230
A+S++A P R+ +S S P ++ A +FDPL +++ Y P + + RESE
Sbjct: 11 ASSALAFTPQKSRVTPSVSTSAAVDDMPGAINFAAKEFKFDPLKLAETYEPFLPWFRESE 70
Query: 231 LKHGRICMLASVGLIVQE-VFTWGGSY-FPKIIPPIAAHDHYLQTG-MAQLLIFIGAFEA 401
L+HGR MLA VG I + V G +Y F I I AHD L++G M QLL++IG ++
Sbjct: 71 LRHGRTAMLAVVGFIATDFVRIPGEAYSFAAIPKTIDAHDALLKSGPMYQLLLWIGLWDL 130
Query: 402 I-SYYAIKQTLAGNRAPGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
I + A G R PGDF + L KD +K + +E+ N
Sbjct: 131 IVTAPAAVAAAKGERTPGDFGW-TLMAPKDDAKMQKKKDSELLN 173
[57][TOP]
>UniRef100_B8BU32 Fucoxanthin chlorophyll a/c protein n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8BU32_THAPS
Length = 254
Score = 65.5 bits (158), Expect = 2e-09
Identities = 58/199 (29%), Positives = 87/199 (43%), Gaps = 35/199 (17%)
Frame = +3
Query: 3 ASVGTRAFLGAAVPRATSARATSSVAVAPVRMMAEM------SKSVPFLLKPKNLDG-WA 161
AS+ + A P A +S+ P RM +M S S+PFL +P NLDG +
Sbjct: 6 ASLLLASTCAAFAPSNNGAAVKTSLDAMPDRMWNKMVDKTQRSASMPFLPRPINLDGSYV 65
Query: 162 ANAEFDPLGISDY------------------IPVAY-LRESELKHGRICMLASVGLIVQE 284
+ FDP +S +P Y +RE+ELKHGR+ MLA G + +
Sbjct: 66 GDVGFDPFYLSSIDKNFAGFIQPPSWEETNGLPTLYWMREAELKHGRVAMLAWTGWLATD 125
Query: 285 ------VFTWGGSYFPKIIPPIAAHDHYLQTG-MAQLLIFIGAFEAISYYAIKQTLAG-- 437
+ G+ + + ++AHD + G + +L+ IG E + + G
Sbjct: 126 GALGPVPLRFPGAAYQAVPNSLSAHDIMVDQGSLGFMLVAIGIIEVCCATVLVEVSKGES 185
Query: 438 NRAPGDFNFDPLNLGKDPS 494
+RA GDF DPL K S
Sbjct: 186 DRAAGDFKLDPLQFLKGKS 204
[58][TOP]
>UniRef100_Q9LKN7 Light-harvesting complex protein LHCC13 n=1 Tax=Guillardia theta
RepID=Q9LKN7_GUITH
Length = 238
Score = 64.7 bits (156), Expect = 4e-09
Identities = 53/130 (40%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Frame = +3
Query: 156 WAANAEFDPLGISDYIPVAYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKII---P 326
WA N G+ + V + RE+E+KHGRI MLA+ GLIVQ++FT+ ++ K
Sbjct: 59 WAVNG-----GVFGWPDVIWAREAEVKHGRIAMLAATGLIVQDLFTF--PFYSKWYTGEK 111
Query: 327 PIAAHDHYLQTGMA-QLLIFIGAFE-AISYYAIKQTLAGNRAPGDFNFDPLNLGKDPSKR 500
A HD ++ G A Q+L+F+ A E AI TL G GD+ FDPL L D +R
Sbjct: 112 VWALHDKLVKVGAAWQVLLFLFALEIPFIQKAIDGTLDGT---GDYGFDPLGLKSD--RR 166
Query: 501 AHYEKAEIKN 530
A EIKN
Sbjct: 167 A---VTEIKN 173
[59][TOP]
>UniRef100_Q5ENN0 Chloroplast light harvesting complex protein n=1 Tax=Heterocapsa
triquetra RepID=Q5ENN0_HETTR
Length = 478
Score = 64.3 bits (155), Expect = 5e-09
Identities = 59/192 (30%), Positives = 87/192 (45%), Gaps = 26/192 (13%)
Frame = +3
Query: 33 AAVPRATSARATSSVAVAPVRMMA-EMSKSVPFLLKPKNLDGWAA-----NAE-FDPLG- 188
A++ A+ R + SV PV ++ ++ + +P K L G N E +DPLG
Sbjct: 69 ASLVAASRRRTSMSVVAKPVPVVNWQVDQKIPVPGSEKALGGMVGADVETNGEIWDPLGF 128
Query: 189 ------------ISDYIPVAYLRESELKHGRICMLASVGLIVQEVFTWGG-SYFPKIIPP 329
+ Y YLRESE+KHGR+CMLA VG++VQ + G P +
Sbjct: 129 GKLYDRNFDFNNVMTYPHAQYLRESEIKHGRVCMLAFVGIVVQSIVQIPGYPQEPDWLNA 188
Query: 330 IAA--HDHYLQTGMAQLLIFIGAFEAISYYAIKQTLAGNRAPGDFNFDPLNLGKDPS--- 494
++A G+ Q+ +F E + +R PGD FDPL L K P
Sbjct: 189 LSACYASKVPTLGLVQMSVFFMLVEGRYFPENAWIGQMDREPGDLGFDPLKLTKKPGFDL 248
Query: 495 KRAHYEKAEIKN 530
K+A + E+KN
Sbjct: 249 KKAQLQ--ELKN 258
[60][TOP]
>UniRef100_B7GBK6 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7GBK6_PHATR
Length = 197
Score = 62.4 bits (150), Expect = 2e-08
Identities = 51/150 (34%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Frame = +3
Query: 69 SSVAVAPVRMMAEMSKSVPFLLKPKNLDGWAANAEFDPLGI---SDYIPVAYLRESELKH 239
S+ A AP + A S + + L FDPLG+ D LR ELKH
Sbjct: 12 SAAAFAPAQQSARTSVATNMAFE-NELGAQPPLGFFDPLGLVADGDQEKFDRLRYVELKH 70
Query: 240 GRICMLASVGLIVQE-------VFTWGGSYFPKIIPPIAAHDHYLQTGMAQLLIFIGAFE 398
GRI MLA VG +VQE + G+ F I AA G+AQ++ FIG E
Sbjct: 71 GRISMLAVVGYLVQENGIRLPGDIDYSGTSFASIPNGFAALSTISTAGIAQIVAFIGFLE 130
Query: 399 AISYYAIKQTLAGNRAPGDFNFDPLNLGKD 488
A+ + + G PGDF D ++ G D
Sbjct: 131 ----IAVMKDITGGEFPGDFRNDYIDFGWD 156
[61][TOP]
>UniRef100_A8KCN1 Light harvesting complex protein 1 (Fragment) n=1 Tax=Guillardia
theta RepID=A8KCN1_GUITH
Length = 216
Score = 62.4 bits (150), Expect = 2e-08
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 8/116 (6%)
Frame = +3
Query: 207 VAYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKI------IPPIAAHDHYLQTG-M 365
V + RE+E+KHGR+CMLA+ G IVQ+++ +FP I HD +++G +
Sbjct: 63 VIWAREAEVKHGRVCMLAATGAIVQDLY-----HFPFIDKWYQGEKMWGLHDAAIKSGAL 117
Query: 366 AQLLIFIGAFEAISYYAIKQ-TLAGNRAPGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
Q+L FIG E ++ T+ G GD FDPL L DP A + E+KN
Sbjct: 118 WQVLFFIGLLELPFLLKLRDGTVDGT---GDIGFDPLGLKNDPDAFARRQITEVKN 170
[62][TOP]
>UniRef100_Q41094 Fucoxanthin-chlorophyll a-c binding protein F, chloroplastic n=1
Tax=Phaeodactylum tricornutum RepID=FCPF_PHATR
Length = 197
Score = 62.4 bits (150), Expect = 2e-08
Identities = 51/150 (34%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Frame = +3
Query: 69 SSVAVAPVRMMAEMSKSVPFLLKPKNLDGWAANAEFDPLGI---SDYIPVAYLRESELKH 239
S+ A AP + A S + + + L FDPLG+ D LR ELKH
Sbjct: 12 SAAAFAPAQQSARTSVATNMAFESE-LGAQPPLGFFDPLGLVADGDQEKFDRLRYVELKH 70
Query: 240 GRICMLASVGLIVQE-------VFTWGGSYFPKIIPPIAAHDHYLQTGMAQLLIFIGAFE 398
GRI MLA VG +VQE + G+ F I AA G+AQ++ FIG E
Sbjct: 71 GRISMLAVVGYLVQENGIRLPGDIDYSGTSFASIPNGFAALSTISTAGIAQIVAFIGFLE 130
Query: 399 AISYYAIKQTLAGNRAPGDFNFDPLNLGKD 488
A+ + + G PGDF D ++ G D
Sbjct: 131 ----IAVMKDITGGEFPGDFRNDYIDFGWD 156
[63][TOP]
>UniRef100_B5Y4K0 Fucoxanthin chlorophyll a/c protein, lhcr type n=1
Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B5Y4K0_PHATR
Length = 279
Score = 62.0 bits (149), Expect = 3e-08
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Frame = +3
Query: 108 MSKSVPFLLKPKNLDG-WAANAEFDPLGISDY-IPVAYLRESELKHGRICMLASVGLIVQ 281
MS ++PFL +P+ LDG + FDP G D + RE+E+KH R+ MLA+ G +
Sbjct: 79 MSTAIPFLKRPEFLDGSMPGDVGFDPFGFVDSEASLVSFREAEIKHARLAMLAAAGWPLS 138
Query: 282 EVFTWGGSYFPKIIPPIAAHDH---YLQTGMAQLL-----IFIGAFEAISYYAIKQTLAG 437
E+F + + + P + A D L G+ ++ +GA AI Y +++ +
Sbjct: 139 ELFDRQFASWLDLDPALDATDRVPSILNGGLGKISPVYWGACLGAAAAIDLYGLRKKRSD 198
Query: 438 -NRAPGDFNFDPLNL-GKDPSKRAHYEKAEIKN 530
+ PG FDPL L + + E AEIKN
Sbjct: 199 PDYFPGKLGFDPLGLYPSTTTGKRRMELAEIKN 231
[64][TOP]
>UniRef100_O81932 Fucoxanthin chlorophyll a/c protein (Fragment) n=1 Tax=Cyclotella
cryptica RepID=O81932_9STRA
Length = 164
Score = 61.6 bits (148), Expect = 3e-08
Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Frame = +3
Query: 117 SVPFLLKPKNLDG-WAANAEFDPLGISDY-IPVAYLRESELKHGRICMLASVGLIVQEV- 287
S+PFL P+ LDG + FDP+G+SD + Y R SELKHGRICMLA VG++ QE
Sbjct: 1 SIPFLTVPEKLDGSMPGDMGFDPMGLSDIQTDLNYARWSELKHGRICMLAVVGMVWQEYG 60
Query: 288 -FTWGGSYFPKIIPPIAAHDHYLQTGMAQLLIFIGAFEAISYYAIKQTLAGNRAPGDFNF 464
G +Y + P A Q L+ IG E ++ G+ PGD +
Sbjct: 61 PHLPGDAYATR--DPWEAISSVGFASNIQTLLAIGVVELANW----NKYYGDGTPGDIGW 114
Query: 465 D 467
D
Sbjct: 115 D 115
[65][TOP]
>UniRef100_B8C7L8 Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8C7L8_THAPS
Length = 256
Score = 60.8 bits (146), Expect = 6e-08
Identities = 56/189 (29%), Positives = 85/189 (44%), Gaps = 36/189 (19%)
Frame = +3
Query: 72 SVAVAPVRMMAEMSKSVPFLLKPKNLDG-WAANAEFDPLGISDYIP-VAYLRESELKHGR 245
++A P +++ S S+PFL +P+ L G +A + FDPLG+S V Y RE+E+KH R
Sbjct: 32 ALATPPSTSLSKYSPSLPFLRRPQFLTGEFAGDVGFDPLGLSSSSEKVLYYREAEIKHAR 91
Query: 246 ICMLASVGLIVQEVF------TWGGSYFPKIIPPIAAHDH---YLQTGMAQLLI------ 380
+ MLA+ G + E+ S+ + P + A D L GM I
Sbjct: 92 LAMLAAAGWPLSELLDRPLTQQLDSSFNLSLSPALDATDRVPSVLNGGMLSDAISPIWWG 151
Query: 381 -FIGAFEAISYYAIKQTLAGNRA-----------------PGDFNFDPLNL-GKDPSKRA 503
+GA A+ I+ + PGD+N+DPLNL D +
Sbjct: 152 VCLGAAAAVDLKGIQNARYSDAVDVNSGISSVNGEQQTYRPGDYNWDPLNLYPTDEEGQF 211
Query: 504 HYEKAEIKN 530
+ AEIK+
Sbjct: 212 RMQLAEIKH 220
[66][TOP]
>UniRef100_Q2IA38 Chloroplast light harvesting protein isoform 4 n=1 Tax=Karlodinium
micrum RepID=Q2IA38_KARMI
Length = 238
Score = 60.1 bits (144), Expect = 1e-07
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Frame = +3
Query: 174 FDPLGISDYIP---VAYLRESELKHGRICMLASVGLIVQEVF--TWGGSYFPKIIPPIAA 338
FDP+G SD I Y RE ELKHGR+ MLA++G +V E F +GG +A
Sbjct: 85 FDPIGFSDDISEGRARYYREVELKHGRLGMLAALGFLVGENFHPLFGGDIDAPAY--LAF 142
Query: 339 HDHYLQTGMAQLLIFIGAFEAISYYAIKQTLAG-------NRAPGDFNFDPLNL-GKDPS 494
L+T ++ I + E S +A G + PGD FDPLNL DP
Sbjct: 143 QQTPLETFWGIVVAGIASLELFSVFAFNNPAGGEPWSIKSDHVPGDLGFDPLNLKPTDPE 202
Query: 495 KRAHYEKAEIKN 530
+ + E+ N
Sbjct: 203 ELKTMQTKELNN 214
[67][TOP]
>UniRef100_B7GCV9 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7GCV9_PHATR
Length = 232
Score = 60.1 bits (144), Expect = 1e-07
Identities = 53/173 (30%), Positives = 87/173 (50%), Gaps = 14/173 (8%)
Frame = +3
Query: 54 SARATSSVAVAPVRMMAEMSKSVPFLLKPKNLDG-WAANAEFDPLGISDYIPVAY-LRES 227
S+++ S + + V + S SVPF+ K K LDG + +A FDPL ++D + R++
Sbjct: 27 SSQSPSVLFMTDVVDRSAKSASVPFMPKNKLLDGSYPGDAGFDPLFLADSQALLEDYRDA 86
Query: 228 ELKHGRICMLASVGLIVQEVF---TWGGSYFPKIIPPIAAHDHYLQTGMAQL-------L 377
E+KHGR+ MLA++G EV+ P ++ L G+ ++
Sbjct: 87 EIKHGRLAMLAALGWPASEVWDRAIANAVSMPPVVDESLRAPSVLNGGLGKIPVEYWAAS 146
Query: 378 IFIGAFEAISYYAIKQTLAGNR-APGDFNFDPLNL-GKDPSKRAHYEKAEIKN 530
+F+ +F I I++ +R PG+ NFDPL L K +K+ + EIKN
Sbjct: 147 LFVASF--IECANIQKRRTDDRWFPGNLNFDPLGLYPKSEAKQREMQLKEIKN 197
[68][TOP]
>UniRef100_B7FQS0 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FQS0_PHATR
Length = 217
Score = 59.3 bits (142), Expect = 2e-07
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 14/156 (8%)
Frame = +3
Query: 105 EMSKSVPFLLKPKNLDG-WAANAEFDPLGIS--DYIPVAYLRESELKHGRICMLASVGLI 275
E SK++PF +PK LDG + FDP G + D + Y+RE+E+KH R+ MLA G +
Sbjct: 47 EKSKALPFANRPKLLDGSMPGDVGFDPFGFAGADKASLMYMREAEIKHCRLAMLAVAGWV 106
Query: 276 VQEVF---TWGGSYFPKIIPPIAAHDHYLQTGMAQL-------LIFIGAFEAISYYAIKQ 425
E+F P + A L G+ ++ ++ + I +K+
Sbjct: 107 FAELFDKPIADAVGLPTALTKSGASPSILNGGLEKIDIAYWLAVVTLAGIVEIENSKVKE 166
Query: 426 TLAGNRAPGDFNFDPLNL-GKDPSKRAHYEKAEIKN 530
+ GD FDP+ L K+ S++ + E+KN
Sbjct: 167 DKGKDYILGDCGFDPIGLYPKEKSEQFAMQTKELKN 202
[69][TOP]
>UniRef100_B5YM80 Fucoxanthin chlorophyll a/c light-harvesting protein n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B5YM80_THAPS
Length = 252
Score = 59.3 bits (142), Expect = 2e-07
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 11/174 (6%)
Frame = +3
Query: 42 PRATSARATSSVAVAPVRMMAE-MSKSVPFLLKPKNLDG-WAANAEFDPLGIS-DYIPVA 212
P A V APV A MS ++PF+ +P LDG A + FDP+G + +
Sbjct: 33 PSTAEEVAEPVVVAAPVAAAAPAMSTALPFMARPVALDGSLAGDVGFDPIGFAKSSADLM 92
Query: 213 YLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIPPIAAHDH---YLQTGMAQL--- 374
RE+E+KH R+ MLA+ G + EVF + P + + D L G+ ++
Sbjct: 93 NYREAEVKHARLAMLAAAGWPLSEVFDKKIAAAFGATPILDSSDRVPSLLNGGLGKISPA 152
Query: 375 --LIFIGAFEAISYYAIKQTLAGNRAPGDFNFDPLNLGKDPSKRAHYEKAEIKN 530
+ IGA AI ++ + PGDF L D + + + AEIKN
Sbjct: 153 YWIACIGAAAAIDVLGNMKSKGADHLPGDFGL-RLGYPSDSAGQQRMQLAEIKN 205
[70][TOP]
>UniRef100_B7G4U8 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G4U8_PHATR
Length = 260
Score = 58.9 bits (141), Expect = 2e-07
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 13/178 (7%)
Frame = +3
Query: 36 AVPRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLDGW-AANAEFDPLGISDY-IPV 209
A P T P + +MS+S+PF+ +P LDG + FDPLG + +
Sbjct: 35 ATPEETVTSPVEEDVTPPPPALPKMSQSLPFMERPAALDGTLVGDVGFDPLGFAKTKADL 94
Query: 210 AYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIPPIAAHDH---YLQTGMAQL-- 374
RE+E+KH R+ MLA+ G + E+F + + + P + A+D L G+ ++
Sbjct: 95 INYREAEVKHARLAMLAAAGWPLSELFDAKIANWMGMTPLLDANDRAPSLLNGGLGKVSP 154
Query: 375 ---LIFIGAFEAISYYAIKQTLAG--NRAPGDFNFDPLNL-GKDPSKRAHYEKAEIKN 530
+ + A AI Y I + + PG+ DP L KD + + + E+KN
Sbjct: 155 VYWVACLVAAAAIDVYGISKARKNEPDYFPGNLGIDPFGLFPKDAAAQEDMKLKELKN 212
[71][TOP]
>UniRef100_B8BYV4 Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8BYV4_THAPS
Length = 214
Score = 58.5 bits (140), Expect = 3e-07
Identities = 58/186 (31%), Positives = 82/186 (44%), Gaps = 16/186 (8%)
Frame = +3
Query: 21 AFLGAAVPRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNLD-GWAANAEFDPLGISD 197
A L + SA A +S +V + AE S S+PF+ KP LD FDPLG+S+
Sbjct: 5 AALSLLAAGSASAFAPASNSVKSSALNAERSPSLPFMNKPALLDPSMPGYKGFDPLGLSN 64
Query: 198 Y----IPVAYLRESELKHGRICMLASVGLIVQEVF--------TWGGSYFPKIIPPIAAH 341
I + +LRE+E+KH R+ MLA G + E F + +H
Sbjct: 65 IDDVGIDLYWLREAEIKHARVAMLAVAGAVWVEAFGPAPGCEAATAKNQMDAFWQIWNSH 124
Query: 342 DHYLQTGMAQLLIFIGAFEAISYYAIKQTL---AGNRAPGDFNFDPLNLGKDPSKRAHYE 512
Y+ A L+FI EA+S I T +G R PG F F N K + +
Sbjct: 125 PQYI----AASLVFIMIAEAVS--GISTTTGRESGEREPGFFGFGS-NFPKTDADMKKMQ 177
Query: 513 KAEIKN 530
E++N
Sbjct: 178 DKELEN 183
[72][TOP]
>UniRef100_Q7XY93 Light-harvest protein (Fragment) n=1 Tax=Griffithsia japonica
RepID=Q7XY93_GRIJA
Length = 102
Score = 58.2 bits (139), Expect = 4e-07
Identities = 31/67 (46%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Frame = +3
Query: 339 HDHYLQTG-MAQLLIFIGAFEAISYYAIKQTLAG--NRAPGDFNFDPLNLGKDPSKRAHY 509
H+ ++ G M Q+L++ FE ++ A+ Q L+G +RAPGDF FDPL LGKDP+K A +
Sbjct: 1 HEGGVENGSMEQILLWCSFFEIMTMPAVFQMLSGKSDRAPGDFCFDPLGLGKDPAKMAVF 60
Query: 510 EKAEIKN 530
+ E+KN
Sbjct: 61 KVNEVKN 67
[73][TOP]
>UniRef100_B7FSI1 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FSI1_PHATR
Length = 270
Score = 58.2 bits (139), Expect = 4e-07
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Frame = +3
Query: 39 VPRATSARATSSVAVAPVRMMAEMSKSVPFLLKPKNL---DGWAANAEFDPLGISDYIPV 209
+P+ ++ TSS V MS+S+PFL+ P L + A N FDPLG++
Sbjct: 54 LPKESNQLQTSSPRKGSV-----MSQSLPFLVCPSALADCNELAGNVGFDPLGLAKNKEQ 108
Query: 210 AY-LRESELKHGRICMLASVGLIVQEVFTWG-GSYF--PKIIPPIAAHDHYLQTGMAQLL 377
+ RE+E+KH R+ MLA+ G + E++ YF ++ +L G+ ++
Sbjct: 109 LWEFREAEIKHARLAMLAAAGYPLSELYDRQIAEYFNMQALVDGTDRAPSFLNGGLERVS 168
Query: 378 -----IFIGAFEAISYYAIKQTLAGNRA--PGDFNFDPLNL-GKDPSKRAHYEKAEIKN 530
+G AI Y + + +G+ PG+ FDP+ L D R E AEIK+
Sbjct: 169 PVWWGFCLGMTAAIDLYGVAKARSGDPTYFPGNLGFDPVGLYPSDRKGRMRMELAEIKH 227
[74][TOP]
>UniRef100_Q2IA40 Chloroplast light harvesting protein isoform 2 n=1 Tax=Karlodinium
micrum RepID=Q2IA40_KARMI
Length = 236
Score = 57.8 bits (138), Expect = 5e-07
Identities = 44/132 (33%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Frame = +3
Query: 174 FDPLGISDYIP---VAYLRESELKHGRICMLASVGLIVQEVF--TWGGSYFPKIIPPIAA 338
FDP+G S+ + Y RE ELKHGR+ MLA++G +V E F +GG +A
Sbjct: 83 FDPVGFSEDLSEGRARYYREVELKHGRLGMLAALGFLVGENFHPLFGGDIDAPAY--LAF 140
Query: 339 HDHYLQTGMAQLLIFIGAFEAISYYAIKQTLAG-------NRAPGDFNFDPLNL-GKDPS 494
L+T ++ I + E S +A G + PGD FDPLNL DP
Sbjct: 141 QQTPLETFWGIVVAAIASLELFSVFAFNNPAGGEPWSIRSDHVPGDLGFDPLNLKPTDPE 200
Query: 495 KRAHYEKAEIKN 530
+ + E+ N
Sbjct: 201 ELKTMQTKELNN 212
[75][TOP]
>UniRef100_Q7XY91 Light-harvest protein (Fragment) n=1 Tax=Griffithsia japonica
RepID=Q7XY91_GRIJA
Length = 120
Score = 57.4 bits (137), Expect = 6e-07
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Frame = +3
Query: 330 IAAHDHYLQTG-MAQLLIFIGAFEAISYYAIKQTL--AGNRAPGDFNFDPLNLGKDPSKR 500
I HD ++ G M Q+L++ FE ++ A+ Q L G+R PGDF FDPL LGKDP+K
Sbjct: 16 INRHDWGVENGSMKQILLWCSFFEIMTMPALVQMLNGQGDRVPGDFCFDPLGLGKDPAKL 75
Query: 501 AHYEKAEIKN 530
A ++ E+KN
Sbjct: 76 AVFKVNEVKN 85
[76][TOP]
>UniRef100_B7GAS4 Protein fucoxanthin chl a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7GAS4_PHATR
Length = 246
Score = 57.4 bits (137), Expect = 6e-07
Identities = 57/189 (30%), Positives = 82/189 (43%), Gaps = 34/189 (17%)
Frame = +3
Query: 3 ASVGTRAFLGAAVPRATSARATSSVAVAPVRMM------AEMSKSVPFLLKPKNLDGWAA 164
A G+ A S +TS A P R+ E S++VPFL +P NLDG +
Sbjct: 10 AMAGSTAAFAPTSSTQASTSSTSLQAAMPDRLWNTMVDKTERSRAVPFLPRPINLDGSSP 69
Query: 165 NAE-FDPLGISDYIP--------------------VAYLRESELKHGRICMLASVGLIVQ 281
+ FDP +S IP + ++RE+E+KH R+ MLA G I
Sbjct: 70 GDQGFDPFYLSS-IPKNFAGFLQPPSWEETGGISTLYWMREAEIKHCRVAMLAVTGWIAT 128
Query: 282 EV---FTWGGSYFPKIIPPIAAHDHYLQTG-MAQLLIFIGAFEAISYYAIKQTLAG---N 440
+ F G+ + I AH+ + G M +L+ IG E + A+ Q G +
Sbjct: 129 DFGVRFPGAGAPYTDIPNAYNAHNILVDQGTMTVMLLAIGFVEFCTGAALVQVSKGELTD 188
Query: 441 RAPGDFNFD 467
R GDF FD
Sbjct: 189 RDAGDFGFD 197
[77][TOP]
>UniRef100_A7YXS6 Chloroplast light harvesting protein isoform 4 n=1 Tax=Karlodinium
micrum RepID=A7YXS6_KARMI
Length = 240
Score = 57.0 bits (136), Expect = 8e-07
Identities = 44/132 (33%), Positives = 61/132 (46%), Gaps = 13/132 (9%)
Frame = +3
Query: 174 FDPLGISDYIP---VAYLRESELKHGRICMLASVGLIVQEVF--TWGGSYFPKIIPPIAA 338
FDP+G S+ I Y RE ELKHGR+ MLA++G +V E F +GG +A
Sbjct: 87 FDPVGFSEDISEGRARYYREVELKHGRLGMLAALGFLVGENFHPLFGGDIDAPAY--LAF 144
Query: 339 HDHYLQTGMAQLLIFIGAFEAISYYAIKQTLAG-------NRAPGDFNFDPLNL-GKDPS 494
L+T ++ I + E S + G + PGD FDPLNL DP
Sbjct: 145 QQTPLETFWGIVVAAIASLELFSVFTFNNPAGGEPWSIRSDHVPGDLGFDPLNLKPTDPE 204
Query: 495 KRAHYEKAEIKN 530
+ + E+ N
Sbjct: 205 ELKTMQTKELNN 216
[78][TOP]
>UniRef100_A7YXS5 Chloroplast light harvesting protein isoform 4 n=1 Tax=Karlodinium
micrum RepID=A7YXS5_KARMI
Length = 240
Score = 57.0 bits (136), Expect = 8e-07
Identities = 44/132 (33%), Positives = 61/132 (46%), Gaps = 13/132 (9%)
Frame = +3
Query: 174 FDPLGISDYIP---VAYLRESELKHGRICMLASVGLIVQEVF--TWGGSYFPKIIPPIAA 338
FDP+G S+ I Y RE ELKHGR+ MLA++G +V E F +GG +A
Sbjct: 87 FDPVGFSEDISEGRARYYREVELKHGRLGMLAALGFLVGENFHPLFGGDIDAPAY--LAF 144
Query: 339 HDHYLQTGMAQLLIFIGAFEAISYYAIKQTLAG-------NRAPGDFNFDPLNL-GKDPS 494
L+T ++ I + E S + G + PGD FDPLNL DP
Sbjct: 145 QQTPLETFWGIVVAAIASLELFSVFTFNNPAGGEPWSIRSDHVPGDLGFDPLNLKPTDPE 204
Query: 495 KRAHYEKAEIKN 530
+ + E+ N
Sbjct: 205 ELKTMQTKELNN 216
[79][TOP]
>UniRef100_A3E4E2 Chlorophyll a-b binding protein n=1 Tax=Karlodinium micrum
RepID=A3E4E2_KARMI
Length = 249
Score = 57.0 bits (136), Expect = 8e-07
Identities = 55/179 (30%), Positives = 76/179 (42%), Gaps = 23/179 (12%)
Frame = +3
Query: 63 ATSSVAVAPVRMMAEMSKSVPFLLKPKNLDGWAANAE----FDPLGISDYIPVA---YLR 221
A SSVA + V++ A S + + WA FDP+G S I + R
Sbjct: 41 AKSSVANSRVKL-ARASANPSMATSSSPIADWAGVTAPLGFFDPVGFSSDISEGRQRFYR 99
Query: 222 ESELKHGRICMLASVGLIVQEVF--TWGGSYFPKIIPPIAAHDHYLQTGMAQLLIFIGAF 395
E ELKHGR+ MLA++G++V E F +GG +P I A LQ I+I
Sbjct: 100 EVELKHGRLAMLAALGMLVAEQFHPLFGGEI---DVPAILAFRETLQLEARSKFIYIAVL 156
Query: 396 ------EAISYYAIKQTLAG-------NRAPGDFNFDPLNL-GKDPSKRAHYEKAEIKN 530
E S + G + PG+ FDPL L KD S+ + E+ N
Sbjct: 157 FSIFIPEVFSVFTFNSPAGGEPWSIREDHEPGNLGFDPLGLKPKDTSEFKEMQTKELNN 215
[80][TOP]
>UniRef100_A3E3Y3 Chloroplast light harvesting protein isoform 4 n=1 Tax=Karlodinium
micrum RepID=A3E3Y3_KARMI
Length = 240
Score = 57.0 bits (136), Expect = 8e-07
Identities = 44/132 (33%), Positives = 61/132 (46%), Gaps = 13/132 (9%)
Frame = +3
Query: 174 FDPLGISDYIP---VAYLRESELKHGRICMLASVGLIVQEVF--TWGGSYFPKIIPPIAA 338
FDP+G S+ I Y RE ELKHGR+ MLA++G +V E F +GG +A
Sbjct: 87 FDPVGFSEDISEGRARYYREVELKHGRLGMLAALGFLVGENFHPLFGGDIDAPAY--LAF 144
Query: 339 HDHYLQTGMAQLLIFIGAFEAISYYAIKQTLAG-------NRAPGDFNFDPLNL-GKDPS 494
L+T ++ I + E S + G + PGD FDPLNL DP
Sbjct: 145 QQTPLETFWGIVVAAIASLELFSVFTFNNPAGGEPWSIRSDHVPGDLGFDPLNLKPTDPE 204
Query: 495 KRAHYEKAEIKN 530
+ + E+ N
Sbjct: 205 ELKTMQTKELNN 216
[81][TOP]
>UniRef100_B8BX93 Fucoxanthin chlorophyll a/c light-harvesting protein, major type
n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8BX93_THAPS
Length = 194
Score = 56.6 bits (135), Expect = 1e-06
Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Frame = +3
Query: 63 ATSSVAVAPVRMMAEMSKSVPFLLKPKNLDGWAANAEFDPLGISDYIPVAYL---RESEL 233
A S+ A AP ++ + F +P + A FDPLG +D I R +EL
Sbjct: 10 ACSAAAFAPAQVGRSSTAVQGFENEPGVI---APTGFFDPLGFTDDIDQEKFDQYRTAEL 66
Query: 234 KHGRICMLASVGLIVQEVFTWGGSYFPKI----IP-PIAAHDHYLQTGMAQLLIFIGAFE 398
KHGR+ LA +G IV E+F WG P + +P +AA D G AQ++ IGA +
Sbjct: 67 KHGRVAQLAVIGYIVPEIFRWGFDIAPGVACADVPNGVAAIDAIPALGWAQIIFAIGAVD 126
Query: 399 AISYY 413
++
Sbjct: 127 VRGWF 131
[82][TOP]
>UniRef100_B7FRW5 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FRW5_PHATR
Length = 196
Score = 56.2 bits (134), Expect = 1e-06
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 10/150 (6%)
Frame = +3
Query: 69 SSVAVAPVRMMAEMSKSVPFLLKPKNLDGWAANAEFDPLGI---SDYIPVAYLRESELKH 239
S+ A AP + A S + + + +DPLG+ D LR E+KH
Sbjct: 12 SAAAFAPAQQSARTSVATNMAFE-NEIGAQQPLGYWDPLGLVADGDQEKFDRLRYVEIKH 70
Query: 240 GRICMLASVGLIVQEV-------FTWGGSYFPKIIPPIAAHDHYLQTGMAQLLIFIGAFE 398
GRICMLA G + QE + G+ F I AA G+AQ++ FIG E
Sbjct: 71 GRICMLAVAGYLTQEAGIRLPGDIDYSGTSFESIPNGFAALSAVPGAGIAQIIAFIGFLE 130
Query: 399 AISYYAIKQTLAGNRAPGDFNFDPLNLGKD 488
A+ + + G GDF + L+ G D
Sbjct: 131 ----IAVMKDITGGEFVGDFRNNYLDFGWD 156
[83][TOP]
>UniRef100_B7G6N5 Protein fucoxanthin chlorophyll a/c protein (Fragment) n=1
Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B7G6N5_PHATR
Length = 246
Score = 55.8 bits (133), Expect = 2e-06
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Frame = +3
Query: 105 EMSKSVPFLLKPKNLDG-WAANAEFDPLGI-SDYIPVAYLRESELKHGRICMLASVGLIV 278
+ S+++PF +P LDG +A + FDP+G S + RE+E+KHGR+ MLAS G I
Sbjct: 57 DRSEAIPFQKRPHALDGTFAGDVGFDPIGFASSKEDLWKYREAEVKHGRLAMLASAGWIF 116
Query: 279 QEVFTWGGSYFPKIIPPIAAHDH---YLQTGMAQL-----LIFIGAFEAISYYAIKQTLA 434
E F + + P + A + L G+ ++ + + A AI I+++
Sbjct: 117 AERFDRPLAQLFSMEPVLDASNRNPALLNGGLGKVSPVYWVSCLVAAAAIDLNGIEKSRN 176
Query: 435 G-NRAPGDFNFDPLNL-GKDPSKRAHYEKAEIKN 530
N PG+ +DPL L DPS + AEIK+
Sbjct: 177 DPNYFPGNLGWDPLGLYPSDPSGQRRMLLAEIKH 210
[84][TOP]
>UniRef100_Q08584 Fucoxanthin-chlorophyll a-c binding protein A, chloroplastic n=1
Tax=Phaeodactylum tricornutum RepID=FCPA_PHATR
Length = 196
Score = 55.8 bits (133), Expect = 2e-06
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 10/150 (6%)
Frame = +3
Query: 69 SSVAVAPVRMMAEMSKSVPFLLKPKNLDGWAANAEFDPLGI---SDYIPVAYLRESELKH 239
S A AP + A S + + + +DPLG+ + LR E+KH
Sbjct: 12 SRAAFAPAQQSARTSVATNMAFE-NEIGAQQPLGYWDPLGLVADGNQEKFDRLRYVEIKH 70
Query: 240 GRICMLASVGLIVQEV-------FTWGGSYFPKIIPPIAAHDHYLQTGMAQLLIFIGAFE 398
GRICMLA G + QE + G+ F I AA G+AQ++ FIG FE
Sbjct: 71 GRICMLAVAGYLTQEAGIRLPGDIDYSGTSFESIPNGFAALSAVPGAGIAQIIAFIGFFE 130
Query: 399 AISYYAIKQTLAGNRAPGDFNFDPLNLGKD 488
A+ + + G GDF + L+ G D
Sbjct: 131 ----IAVMKDITGGEFVGDFRNNYLDFGWD 156
[85][TOP]
>UniRef100_Q2IA41 Chloroplast light harvesting protein isoform 1 n=1 Tax=Karlodinium
micrum RepID=Q2IA41_KARMI
Length = 290
Score = 55.5 bits (132), Expect = 2e-06
Identities = 45/138 (32%), Positives = 62/138 (44%), Gaps = 19/138 (13%)
Frame = +3
Query: 174 FDPLGISDYIPVA---YLRESELKHGRICMLASVGLIVQEVF--TWGGSYFPKIIPPIAA 338
FDP+G S+ I + RE ELKHGR+ MLA++G++V E F +GG +P I A
Sbjct: 83 FDPVGFSNDISEGRQRFYREVELKHGRLAMLAALGMLVAEQFHPLFGGEI---DVPAILA 139
Query: 339 HDHYLQTGMAQLLIFIGAF------EAISYYAIKQTLAG-------NRAPGDFNFDPLNL 479
LQ I+I E S + G + PG+ FDPL L
Sbjct: 140 FRETLQLEARSKFIYIAVLFSIFIPEVFSVFTFNSPAGGEPWSIREDHEPGNLGFDPLGL 199
Query: 480 -GKDPSKRAHYEKAEIKN 530
KD S+ + E+ N
Sbjct: 200 KPKDTSEFKEMQTKELNN 217
[86][TOP]
>UniRef100_B8CGD3 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8CGD3_THAPS
Length = 377
Score = 55.5 bits (132), Expect = 2e-06
Identities = 50/174 (28%), Positives = 70/174 (40%), Gaps = 34/174 (19%)
Frame = +3
Query: 111 SKSVPFLLKPKNLDG-WAANAEFDPLGISDYIPVAYLRESELKHGRICMLASVGLIVQEV 287
S ++PFL +P LDG A + FDPLG S+ + ++E+E++H R+ MLA VG + E
Sbjct: 92 SIAIPFLPRPTPLDGSHAGDYGFDPLGFSETFDLYTMQEAEIRHARLAMLAVVGWPMSE- 150
Query: 288 FTWGGSYFPKIIPPIAAHDHYLQTGMA----------QLLIFIGAFEAISYYAIKQTLAG 437
+ A D LQ G A L G A ++ K +L
Sbjct: 151 --------------LLAPDWMLQNGCAPSVLNGVNPLSFLAIAGFLGAAGFFEFKTSLRS 196
Query: 438 N-------------------RAPGDFNFDPLNL----GKDPSKRAHYEKAEIKN 530
N GD+N+DPLNL G D R EI +
Sbjct: 197 NVGTPMGKIHEKDMSAIWEFGVAGDYNWDPLNLYSAAGNDFKGRKGLRDVEISH 250
[87][TOP]
>UniRef100_B7GBK7 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7GBK7_PHATR
Length = 197
Score = 55.5 bits (132), Expect = 2e-06
Identities = 48/150 (32%), Positives = 65/150 (43%), Gaps = 10/150 (6%)
Frame = +3
Query: 69 SSVAVAPVRMMAEMSKSVPFLLKPKNLDGWAANAEFDPLGI---SDYIPVAYLRESELKH 239
S+ A AP + A S + + L FDPLG+ D LR E+KH
Sbjct: 12 SAAAFAPAQQSARTSVATNMAFE-NELGAQPPLGFFDPLGLVADGDQEKFDRLRYVEIKH 70
Query: 240 GRICMLASVGLIVQE-------VFTWGGSYFPKIIPPIAAHDHYLQTGMAQLLIFIGAFE 398
GRI MLA G +VQE + G+ F I AA G+AQ++ FIG E
Sbjct: 71 GRISMLAVAGYLVQENGIRLPGDIDYSGTSFESIPNGFAALTTISGAGIAQIVAFIGFLE 130
Query: 399 AISYYAIKQTLAGNRAPGDFNFDPLNLGKD 488
A+ + + G GDF D ++ G D
Sbjct: 131 ----LAVMKDITGGEFVGDFRNDFIDFGWD 156
[88][TOP]
>UniRef100_A8J431 Stress-related chlorophyll a/b binding protein 2 n=1
Tax=Chlamydomonas reinhardtii RepID=A8J431_CHLRE
Length = 259
Score = 55.5 bits (132), Expect = 2e-06
Identities = 62/191 (32%), Positives = 81/191 (42%), Gaps = 29/191 (15%)
Frame = +3
Query: 45 RATSARATSSVAVAPVRMM--AEMSKSVPFLLKP-----KNLDGWAANAE--FDPLGI-- 191
R T ARAT +V R AE + P + KNL G A E FDP G
Sbjct: 14 RQTPARATVAVKSVSGRRTTAAEPQTAAPVAAEDVFAYTKNLPGVTAPFEGVFDPAGFLA 73
Query: 192 -SDYIPVAYLRESELKHGRICMLASVGLIVQE-------VFTWGGSYFPKIIPPIAAHDH 347
+ V RESE+ HGR+ MLA++G +V E F W G ++ P H
Sbjct: 74 TASIKDVRRWRESEITHGRVAMLAALGFVVGEQLQDFPLFFNWDG----RVSGPAIYHFQ 129
Query: 348 YLQTGMAQ-LLIFIGAFE----AISYYAIKQT----LAGNRAPGDFNFDPLNL-GKDPSK 497
+ G + LLI IG E A+ + T L + PGD FDPL L DP +
Sbjct: 130 QIGQGFWEPLLIAIGVAESYRVAVGWATPTGTGFNSLKDDYEPGDLGFDPLGLKPTDPEE 189
Query: 498 RAHYEKAEIKN 530
+ E+ N
Sbjct: 190 LKVMQTKELNN 200
[89][TOP]
>UniRef100_Q08587 Fucoxanthin-chlorophyll a-c binding protein D, chloroplastic n=1
Tax=Phaeodactylum tricornutum RepID=FCPD_PHATR
Length = 197
Score = 54.7 bits (130), Expect = 4e-06
Identities = 43/116 (37%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Frame = +3
Query: 174 FDPLGI---SDYIPVAYLRESELKHGRICMLASVGLIVQE-------VFTWGGSYFPKII 323
FDPLG+ D LR E+KHGRI MLA VG +VQE + G F + I
Sbjct: 46 FDPLGLVADGDQEKFDRLRYVEIKHGRISMLAVVGYLVQEAGVRLPGTIDYSGKTFAE-I 104
Query: 324 PPIAAHDHYLQTGMAQLLIFIGAFEAISYYAIKQTLAGN-RAPGDFNFDPLNLGKD 488
P +AA G+ QLL FIG E+ ++ + L G GDF ++ G D
Sbjct: 105 PSLAAFKEIPAGGLVQLLFFIGVLES----SVMRDLTGEAEFVGDFRNGAIDFGWD 156
[90][TOP]
>UniRef100_Q9ATC4 Light harvesting complex protein 2 (Fragment) n=1 Tax=Vaucheria
litorea RepID=Q9ATC4_VAULI
Length = 150
Score = 54.3 bits (129), Expect = 5e-06
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Frame = +3
Query: 213 YLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKI---------IPPIAAHDHYLQTGM 365
+L+ESE+KHGRICMLA VG +V G + P + P A + G+
Sbjct: 10 WLQESEIKHGRICMLAFVGTLV----IHAGIHIPNLGYTSDWYNSFPEFVAKN---PLGL 62
Query: 366 AQLLIFIGAFEAI--SYYAIKQTLAGNRAPGDFNFDPLNL--GKDPSKRAHYEKAEIKN 530
AQ++ + +E + + T NR PG NFD LNL GK+ S+ + EIKN
Sbjct: 63 AQVIAGLTIWEGFHGTETGLMWTGEANRKPGHLNFDLLNLMKGKNESQLKSIQLKEIKN 121
[91][TOP]
>UniRef100_O65927 Fucoxanthin chlorophyll a/c binding protein n=1 Tax=Cyclotella
cryptica RepID=O65927_9STRA
Length = 210
Score = 54.3 bits (129), Expect = 5e-06
Identities = 58/183 (31%), Positives = 75/183 (40%), Gaps = 24/183 (13%)
Frame = +3
Query: 54 SARATSSVAVAPVRMMAEMSK-------SVPFLLKPKNLDGWAANAEFDPLGISDYIPVA 212
SA A S+ A AP A S +P L P FDPLG ++
Sbjct: 8 SALAGSTAAFAPAATRASSSALNAFSAADLPGALPPVGF--------FDPLGFAEKADEK 59
Query: 213 YL---RESELKHGRICMLASVGLIVQEVFTWGGSYF-PKIIPPIAAHDHYLQTGMAQLLI 380
L RE+E+ HGR+ MLA VG +V E F +I P H + G L++
Sbjct: 60 TLKRYREAEVTHGRVAMLAVVGFLVGEAVEGSSFLFDAQISGPAITHFTQVPDGWDALIV 119
Query: 381 -FIGAFE-----------AISYYAIKQTLAGNRAPGDFNFDPLNL-GKDPSKRAHYEKAE 521
FIGA E A + Y L N PGD FDPL L +DP + E
Sbjct: 120 TFIGAAEAQRAQIGWVDPADASYDQPGLLRDNYYPGDIGFDPLGLKPEDPEELNIMITKE 179
Query: 522 IKN 530
++N
Sbjct: 180 LQN 182
[92][TOP]
>UniRef100_A1YZ14 Chloroplast light-harvesting complex protein 10 (Fragment) n=1
Tax=Geminigera cryophila RepID=A1YZ14_9CRYP
Length = 99
Score = 54.3 bits (129), Expect = 5e-06
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = +3
Query: 222 ESELKHGRICMLASVGLIVQEVFTWG-GSYFPKIIPPIAAHDHYLQTG-MAQLLIFIGAF 395
E+E+KHGR+CMLA+ G +VQ+++T+ S + + HD +++G + Q+L FIG
Sbjct: 3 EAEIKHGRVCMLAATGAVVQDLYTFPFMSKWFQGEKMWGLHDAAIKSGALWQVLWFIGLL 62
Query: 396 EAISYYAIKQTLAGNRAPGDFNFDPLNLGKDP 491
E + +K GD FDPL L +DP
Sbjct: 63 EI--PFLLKLANGSIDGTGDIGFDPLGLAQDP 92
[93][TOP]
>UniRef100_B2WWS8 LHCV 2 (Fragment) n=2 Tax=Eukaryota RepID=B2WWS8_ELYCH
Length = 121
Score = 54.3 bits (129), Expect = 5e-06
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Frame = +3
Query: 213 YLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKI---------IPPIAAHDHYLQTGM 365
+L+ESE+KHGRICMLA VG +V G + P + P A + G+
Sbjct: 8 WLQESEIKHGRICMLAFVGTLV----IHAGIHIPNLGYTSDWYNSFPEFVAKN---PLGL 60
Query: 366 AQLLIFIGAFEAI--SYYAIKQTLAGNRAPGDFNFDPLNL--GKDPSKRAHYEKAEIKN 530
AQ++ + +E + + T NR PG NFD LNL GK+ S+ + EIKN
Sbjct: 61 AQVIAGLTIWEGFHGTETGLMWTGEANRKPGHLNFDLLNLMKGKNESQLKSIQLKEIKN 119
[94][TOP]
>UniRef100_O65892 Fucoxanthin chlorophyll a/c binding protein n=1 Tax=Cyclotella
cryptica RepID=O65892_9STRA
Length = 210
Score = 53.9 bits (128), Expect = 7e-06
Identities = 58/183 (31%), Positives = 75/183 (40%), Gaps = 24/183 (13%)
Frame = +3
Query: 54 SARATSSVAVAPVRMMAEMSK-------SVPFLLKPKNLDGWAANAEFDPLGISDYIPVA 212
SA A S+ A AP A S +P L P FDPLG ++
Sbjct: 8 SALAGSTAAFAPAATRASSSALNAFSAADLPGALPPVGF--------FDPLGFAEKADDK 59
Query: 213 YL---RESELKHGRICMLASVGLIVQEVFTWGGSYF-PKIIPPIAAHDHYLQTGMAQLLI 380
L RE+E+ HGR+ MLA VG +V E F +I P H + G L++
Sbjct: 60 TLKRYREAEVTHGRVAMLAVVGFLVGEAVEGSSFLFDAQISGPAITHFTQVPDGWDALIV 119
Query: 381 -FIGAFE-----------AISYYAIKQTLAGNRAPGDFNFDPLNL-GKDPSKRAHYEKAE 521
FIGA E A + Y L N PGD FDPL L +DP + E
Sbjct: 120 TFIGAAEAQRAQIGWVDPADASYDQPGLLRDNYYPGDIGFDPLGLKPEDPEELNIMITKE 179
Query: 522 IKN 530
++N
Sbjct: 180 LQN 182
[95][TOP]
>UniRef100_Q41093 Fucoxanthin-chlorophyll a-c binding protein E, chloroplastic n=1
Tax=Phaeodactylum tricornutum RepID=FCPE_PHATR
Length = 197
Score = 53.9 bits (128), Expect = 7e-06
Identities = 41/115 (35%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
Frame = +3
Query: 174 FDPLGI---SDYIPVAYLRESELKHGRICMLASVGLIVQE-------VFTWGGSYFPKII 323
FDPLG+ D LR E+KHGRI MLA G +VQE + G+ F I
Sbjct: 46 FDPLGLVADGDQEKFDRLRYVEIKHGRISMLAVAGYLVQENGIRLPGDIDYSGTSFESIP 105
Query: 324 PPIAAHDHYLQTGMAQLLIFIGAFEAISYYAIKQTLAGNRAPGDFNFDPLNLGKD 488
AA G+AQ++ FIG E A+ + + G GDF D ++ G D
Sbjct: 106 NGFAALTTISGAGIAQIVAFIGFLE----LAVMKDITGGEFVGDFRNDFIDFGWD 156
[96][TOP]
>UniRef100_Q08586 Fucoxanthin-chlorophyll a-c binding protein C, chloroplastic n=1
Tax=Phaeodactylum tricornutum RepID=FCPC_PHATR
Length = 197
Score = 53.9 bits (128), Expect = 7e-06
Identities = 43/116 (37%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Frame = +3
Query: 174 FDPLGI---SDYIPVAYLRESELKHGRICMLASVGLIVQE-------VFTWGGSYFPKII 323
FDPLG+ D LR E+KHGRI MLA VG +VQE + G F + I
Sbjct: 46 FDPLGLVADGDQEKFDRLRYVEIKHGRISMLAVVGYLVQEAGVRLPGTIDYSGKTFAE-I 104
Query: 324 PPIAAHDHYLQTGMAQLLIFIGAFEAISYYAIKQTLAGN-RAPGDFNFDPLNLGKD 488
P AA G+ QLL FIG E+ ++ + L G GDF ++ G D
Sbjct: 105 PKFAAFKEIPAGGLVQLLFFIGVLES----SVMRDLTGEAEFVGDFRNGAIDFGWD 156
[97][TOP]
>UniRef100_Q2IA74 Chloroplast light harvesting protein isoform 5 n=1 Tax=Isochrysis
galbana RepID=Q2IA74_ISOGA
Length = 225
Score = 53.5 bits (127), Expect = 9e-06
Identities = 50/152 (32%), Positives = 68/152 (44%), Gaps = 33/152 (21%)
Frame = +3
Query: 174 FDPLGISDYIP---VAYLRESELKHGRICMLASVGLIVQEVFTWGGSYFPKIIP------ 326
FDPLGIS + V + R SELKHGR+ M A+VG +V ++ G FP +
Sbjct: 50 FDPLGISSSVSDEAVMWFRHSELKHGRVAMAATVGCLVSKL----GITFPGDLANGVPFA 105
Query: 327 ------PIAAHDHYLQTGMAQLLIFIGAFEAIS-----YYA-----------IKQTLAGN 440
P AA D G QL +FIGA E S +Y + + + G
Sbjct: 106 SVGAGGPFAAWDAVPTAGKLQLFLFIGALEWASETKKPHYMRGGVPGKIDPYLFEGIPGL 165
Query: 441 RAPGDFNFDPLNL--GKDPSKRAHYEKAEIKN 530
AP +DPLN ++A K+E+KN
Sbjct: 166 WAPKIRFWDPLNTMGALTEEQKATKRKSELKN 197
[98][TOP]
>UniRef100_B7FRW2 Protein fucoxanthin chlorophyl a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FRW2_PHATR
Length = 198
Score = 53.5 bits (127), Expect = 9e-06
Identities = 42/116 (36%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Frame = +3
Query: 174 FDPLGI---SDYIPVAYLRESELKHGRICMLASVGLIVQE-------VFTWGGSYFPKII 323
FDPLG+ D LR E+KHGRI MLA VG +VQE + G F +I
Sbjct: 46 FDPLGLVADGDQEKFDRLRYVEIKHGRISMLAVVGYLVQEAGVRLPGTIDYSGKTFAEIP 105
Query: 324 PPIAAHDHYLQTGMAQLLIFIGAFEAISYYAIKQTLAGN-RAPGDFNFDPLNLGKD 488
AA G+ QLL FIG E+ ++ + L G GDF ++ G D
Sbjct: 106 NGFAAFKEIPAGGLVQLLFFIGVLES----SVMRDLTGEAEFVGDFRNGAIDFGWD 157