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[1][TOP]
>UniRef100_C1FGA1 Predicted protein (Fragment) n=1 Tax=Micromonas sp. RCC299
RepID=C1FGA1_9CHLO
Length = 401
Score = 176 bits (445), Expect = 1e-42
Identities = 88/152 (57%), Positives = 108/152 (71%), Gaps = 6/152 (3%)
Frame = +2
Query: 86 PQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPS 265
P + HP VLQLGGSDPE +A A A++ PYGY EINLNCGCPSP VAGKGAFGAALM P
Sbjct: 58 PTATHPSVLQLGGSDPETMARATAVAAPYGYDEINLNCGCPSPKVAGKGAFGAALMLEPE 117
Query: 266 VVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAA------GGVRHFSV 427
+V + M E + P+TVKCR+GVD DSY+ L RFV+TV+ A G F++
Sbjct: 118 LVRDVVAAMRENSG-GAPVTVKCRIGVDDHDSYDDLCRFVETVACAMVPTRTDGRPLFAI 176
Query: 428 HARAAILGGLSPAQNRSIPPLRYGYVYRLAAE 523
HAR A+L GLSPA+NR++PPLRY + Y LA +
Sbjct: 177 HARKALLAGLSPAENRTVPPLRYEWAYALARD 208
[2][TOP]
>UniRef100_Q012U0 Nitrogen regulation family protein (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q012U0_OSTTA
Length = 490
Score = 171 bits (434), Expect = 2e-41
Identities = 83/146 (56%), Positives = 102/146 (69%)
Frame = +2
Query: 86 PQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPS 265
P VLQLGGSDPE L A A++ PYGY EINLN GCPSP VAGKG FGAALM P
Sbjct: 155 PVETAATVLQLGGSDPEILGRATAIAAPYGYEEINLNSGCPSPKVAGKGCFGAALMTEPR 214
Query: 266 VVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAI 445
+VAE + M E A P+++KCR+GVD DSY++L +VDT+ A R F VHAR A+
Sbjct: 215 LVAECLQAMNENAPSGTPVSIKCRIGVDECDSYDALCEYVDTIVRASATRRFYVHARKAL 274
Query: 446 LGGLSPAQNRSIPPLRYGYVYRLAAE 523
L GLSPA+NRS+PPL++ + Y LA +
Sbjct: 275 LNGLSPAENRSVPPLKHEWAYALARD 300
[3][TOP]
>UniRef100_A4S1U7 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus
CCE9901 RepID=A4S1U7_OSTLU
Length = 355
Score = 170 bits (431), Expect = 5e-41
Identities = 86/160 (53%), Positives = 105/160 (65%)
Frame = +2
Query: 44 SARDGVPPPPSASPPQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVA 223
SARDG P + VLQLGGS PE L A A++ PYGY EINLN GCPSP VA
Sbjct: 41 SARDGDRVDKFLDYPAATFGTVLQLGGSTPEYLGRATAIAAPYGYDEINLNSGCPSPKVA 100
Query: 224 GKGAFGAALMKTPSVVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAA 403
GKG FGAALM P +VAE MAE A P++VKCR+GVD DSY+ L +V+ + A
Sbjct: 101 GKGCFGAALMAEPGLVAECLAAMAENAPEGTPVSVKCRIGVDDVDSYDDLCDYVERIVAG 160
Query: 404 GGVRHFSVHARAAILGGLSPAQNRSIPPLRYGYVYRLAAE 523
R F VHAR A+L GLSPA+NR++PPL++ + Y LA +
Sbjct: 161 SSTRRFYVHARKALLAGLSPAENRTVPPLKHEWAYALARD 200
[4][TOP]
>UniRef100_Q8LFT6 Putative uncharacterized protein n=1 Tax=Arabidopsis thaliana
RepID=Q8LFT6_ARATH
Length = 404
Score = 169 bits (427), Expect = 1e-40
Identities = 87/149 (58%), Positives = 103/149 (69%)
Frame = +2
Query: 77 ASPPQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMK 256
A PQ QHP+VLQLGGS+ E LA A LS YGY EINLNCGCPSP VAG G FG +LM
Sbjct: 87 AFSPQ-QHPIVLQLGGSNVENLAKAAKLSDAYGYDEINLNCGCPSPKVAGHGCFGVSLML 145
Query: 257 TPSVVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHAR 436
P +V EA A AA+ ++P+TVKCR+GVD DSY+ L F+ VS RHF VH+R
Sbjct: 146 KPKLVGEAMS--AIAANTNVPVTVKCRIGVDNHDSYDELCDFIYKVSTLSPTRHFIVHSR 203
Query: 437 AAILGGLSPAQNRSIPPLRYGYVYRLAAE 523
A+LGG+SPA NR IPPL+Y Y Y L +
Sbjct: 204 KALLGGISPADNRRIPPLKYEYYYALVRD 232
[5][TOP]
>UniRef100_Q8H128 Putative uncharacterized protein At3g63510 n=1 Tax=Arabidopsis
thaliana RepID=Q8H128_ARATH
Length = 419
Score = 169 bits (427), Expect = 1e-40
Identities = 87/149 (58%), Positives = 103/149 (69%)
Frame = +2
Query: 77 ASPPQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMK 256
A PQ QHP+VLQLGGS+ E LA A LS YGY EINLNCGCPSP VAG G FG +LM
Sbjct: 102 AFSPQ-QHPIVLQLGGSNVENLAKAAKLSDAYGYDEINLNCGCPSPKVAGHGCFGVSLML 160
Query: 257 TPSVVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHAR 436
P +V EA A AA+ ++P+TVKCR+GVD DSY+ L F+ VS RHF VH+R
Sbjct: 161 KPKLVGEAMS--AIAANTNVPVTVKCRIGVDNHDSYDELCDFIYKVSTLSPTRHFIVHSR 218
Query: 437 AAILGGLSPAQNRSIPPLRYGYVYRLAAE 523
A+LGG+SPA NR IPPL+Y Y Y L +
Sbjct: 219 KALLGGISPADNRRIPPLKYEYYYALVRD 247
[6][TOP]
>UniRef100_A8MRX7 Uncharacterized protein At3g63510.2 n=1 Tax=Arabidopsis thaliana
RepID=A8MRX7_ARATH
Length = 386
Score = 169 bits (427), Expect = 1e-40
Identities = 87/149 (58%), Positives = 103/149 (69%)
Frame = +2
Query: 77 ASPPQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMK 256
A PQ QHP+VLQLGGS+ E LA A LS YGY EINLNCGCPSP VAG G FG +LM
Sbjct: 69 AFSPQ-QHPIVLQLGGSNVENLAKAAKLSDAYGYDEINLNCGCPSPKVAGHGCFGVSLML 127
Query: 257 TPSVVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHAR 436
P +V EA A AA+ ++P+TVKCR+GVD DSY+ L F+ VS RHF VH+R
Sbjct: 128 KPKLVGEAMS--AIAANTNVPVTVKCRIGVDNHDSYDELCDFIYKVSTLSPTRHFIVHSR 185
Query: 437 AAILGGLSPAQNRSIPPLRYGYVYRLAAE 523
A+LGG+SPA NR IPPL+Y Y Y L +
Sbjct: 186 KALLGGISPADNRRIPPLKYEYYYALVRD 214
[7][TOP]
>UniRef100_A9U5E7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9U5E7_PHYPA
Length = 402
Score = 166 bits (420), Expect = 9e-40
Identities = 85/140 (60%), Positives = 101/140 (72%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
QHP+VLQLGGSDPE+L A L+ Y Y EINLNCGCPS VAG G FGA+LM +VA
Sbjct: 79 QHPIVLQLGGSDPEKLLKASLLASVYEYDEINLNCGCPSEKVAGHGCFGASLMLESGLVA 138
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E +AE + P+TVKCR+GVD DSY+ L +FV TVS++ +HF VHAR AIL G
Sbjct: 139 ECMAAIAEGSP-GTPVTVKCRIGVDDFDSYDLLHKFVTTVSSSSPTQHFVVHARKAILKG 197
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
LSPA NR+IPPL+Y YVY L
Sbjct: 198 LSPAANRTIPPLKYEYVYAL 217
[8][TOP]
>UniRef100_B7FNH4 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=B7FNH4_MEDTR
Length = 432
Score = 165 bits (418), Expect = 2e-39
Identities = 85/164 (51%), Positives = 111/164 (67%)
Frame = +2
Query: 23 IAVGAVASARDGVPPPPSASPPQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCG 202
+A + +D + + SP QHP+VLQ+GGS+ E LA A L+ Y Y EINLNCG
Sbjct: 100 LAAETIVHQKDNLDRFLAYSP--EQHPIVLQIGGSNIESLAKATELANAYCYDEINLNCG 157
Query: 203 CPSPTVAGKGAFGAALMKTPSVVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRF 382
CPSP VAG G+FG +LM P VAEA A AA+ ++P++VKCR+GVD DSY+ L F
Sbjct: 158 CPSPRVAGHGSFGVSLMLDPKFVAEAMS--AIAANTNVPVSVKCRIGVDDRDSYDELCEF 215
Query: 383 VDTVSAAGGVRHFSVHARAAILGGLSPAQNRSIPPLRYGYVYRL 514
V TVS+ +HF +H+R A+L G+SPA+NRSIPPL+Y Y Y L
Sbjct: 216 VSTVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGL 259
[9][TOP]
>UniRef100_Q22A31 TIM-barrel protein, yjbN family n=1 Tax=Tetrahymena thermophila
SB210 RepID=Q22A31_TETTH
Length = 466
Score = 164 bits (415), Expect = 3e-39
Identities = 85/143 (59%), Positives = 100/143 (69%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
QHPVV+QLGG+DP+ LA A + GY E+NLN GCPS V G FGA LMK P +VA
Sbjct: 143 QHPVVIQLGGNDPDNLAKAAKICEEIGYDEVNLNVGCPSDRVQS-GKFGACLMKEPELVA 201
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E R+M EA S+P+TVKCRLGVD DSYE F+ TVS G V+HF VHAR A L G
Sbjct: 202 EIMRKMKEAC--SIPVTVKCRLGVDNFDSYEFARDFIKTVSEKGQVQHFVVHARKAFLKG 259
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
L+PAQNR++PPL+Y YV RL E
Sbjct: 260 LNPAQNRNVPPLKYDYVLRLKQE 282
[10][TOP]
>UniRef100_C0PDX7 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C0PDX7_MAIZE
Length = 296
Score = 162 bits (409), Expect = 2e-38
Identities = 80/143 (55%), Positives = 97/143 (67%)
Frame = +2
Query: 86 PQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPS 265
P+ QHP+VLQ+GGS+ E LA A L+ Y Y EINLNCGCPS VAG G FGA LM P
Sbjct: 108 PEEQHPIVLQIGGSNLENLAKATELANDYSYDEINLNCGCPSGKVAGHGCFGARLMFDPE 167
Query: 266 VVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAI 445
V +A +A D +P++VKCR+GVD DSYE L FVD V + RHF +HAR A+
Sbjct: 168 FVGDAMSTIAANCD--VPVSVKCRIGVDDRDSYEELCEFVDKVISKSPTRHFIIHARKAL 225
Query: 446 LGGLSPAQNRSIPPLRYGYVYRL 514
L GLSPA+NR IPPL+Y Y + L
Sbjct: 226 LSGLSPAENRKIPPLKYEYYFAL 248
[11][TOP]
>UniRef100_B4FSX3 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FSX3_MAIZE
Length = 425
Score = 162 bits (409), Expect = 2e-38
Identities = 80/143 (55%), Positives = 97/143 (67%)
Frame = +2
Query: 86 PQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPS 265
P+ QHP+VLQ+GGS+ E LA A L+ Y Y EINLNCGCPS VAG G FGA LM P
Sbjct: 108 PEEQHPIVLQIGGSNLENLAKATELANDYSYDEINLNCGCPSGKVAGHGCFGARLMFDPE 167
Query: 266 VVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAI 445
V +A +A D +P++VKCR+GVD DSYE L FVD V + RHF +HAR A+
Sbjct: 168 FVGDAMSTIAANCD--VPVSVKCRIGVDDRDSYEELCEFVDKVISKSPTRHFIIHARKAL 225
Query: 446 LGGLSPAQNRSIPPLRYGYVYRL 514
L GLSPA+NR IPPL+Y Y + L
Sbjct: 226 LSGLSPAENRKIPPLKYEYYFAL 248
[12][TOP]
>UniRef100_C5YDS7 Putative uncharacterized protein Sb06g006720 n=1 Tax=Sorghum
bicolor RepID=C5YDS7_SORBI
Length = 368
Score = 161 bits (408), Expect = 2e-38
Identities = 79/143 (55%), Positives = 97/143 (67%)
Frame = +2
Query: 86 PQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPS 265
P+ QHP+VLQ+GGS+ E LA A L+ Y Y EINLNCGCPS VAG G FGA LM P
Sbjct: 46 PEEQHPIVLQIGGSNLENLAKATELANDYSYDEINLNCGCPSGKVAGHGCFGARLMFEPE 105
Query: 266 VVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAI 445
V +A +A D +P++VKCR+GVD DSYE L FVD V + RHF +HAR A+
Sbjct: 106 FVGDAMSTIAANCD--VPVSVKCRIGVDDRDSYEELCEFVDKVVSKSPTRHFIIHARKAL 163
Query: 446 LGGLSPAQNRSIPPLRYGYVYRL 514
L GLSPA+NR +PPL+Y Y + L
Sbjct: 164 LSGLSPAENRKVPPLKYEYYFAL 186
[13][TOP]
>UniRef100_UPI0000DD8FB9 Os04g0278900 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000DD8FB9
Length = 449
Score = 160 bits (405), Expect = 5e-38
Identities = 79/143 (55%), Positives = 99/143 (69%)
Frame = +2
Query: 86 PQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPS 265
P QHP+VLQ+GGS+ + LA A L+ Y Y EINLNCGCPS VAG G FGA LM P
Sbjct: 127 PAEQHPIVLQIGGSNLDNLAKATELANAYSYDEINLNCGCPSGKVAGHGCFGARLMFDPE 186
Query: 266 VVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAI 445
V +A A AA+ ++P++VKCR+GVD DSYE L FVD V + RHF +HAR A+
Sbjct: 187 FVGDAMS--AIAANCNVPVSVKCRIGVDDRDSYEELCEFVDKVVSKSPTRHFIIHARKAL 244
Query: 446 LGGLSPAQNRSIPPLRYGYVYRL 514
L GLSPA+NR++PPL+Y Y + L
Sbjct: 245 LSGLSPAENRNVPPLKYEYYFAL 267
[14][TOP]
>UniRef100_Q0JEG3 Os04g0278900 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q0JEG3_ORYSJ
Length = 368
Score = 160 bits (405), Expect = 5e-38
Identities = 79/143 (55%), Positives = 99/143 (69%)
Frame = +2
Query: 86 PQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPS 265
P QHP+VLQ+GGS+ + LA A L+ Y Y EINLNCGCPS VAG G FGA LM P
Sbjct: 46 PAEQHPIVLQIGGSNLDNLAKATELANAYSYDEINLNCGCPSGKVAGHGCFGARLMFDPE 105
Query: 266 VVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAI 445
V +A A AA+ ++P++VKCR+GVD DSYE L FVD V + RHF +HAR A+
Sbjct: 106 FVGDAMS--AIAANCNVPVSVKCRIGVDDRDSYEELCEFVDKVVSKSPTRHFIIHARKAL 163
Query: 446 LGGLSPAQNRSIPPLRYGYVYRL 514
L GLSPA+NR++PPL+Y Y + L
Sbjct: 164 LSGLSPAENRNVPPLKYEYYFAL 186
[15][TOP]
>UniRef100_Q01LS4 OSIGBa0113C11.1 protein n=1 Tax=Oryza sativa RepID=Q01LS4_ORYSA
Length = 368
Score = 160 bits (404), Expect = 6e-38
Identities = 79/143 (55%), Positives = 98/143 (68%)
Frame = +2
Query: 86 PQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPS 265
P QHP+VLQ+GGS+ + LA A L+ Y Y EINLNCGCPS VAG G FGA LM P
Sbjct: 46 PAEQHPIVLQIGGSNLDNLAKATELANAYSYDEINLNCGCPSGKVAGHGCFGARLMFDPE 105
Query: 266 VVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAI 445
V +A A AA+ ++P++VKCR+GVD DSYE L FVD V + RHF +HAR A+
Sbjct: 106 FVGDAMS--AIAANCNVPVSVKCRIGVDDRDSYEELCEFVDKVVSKSPTRHFIIHARKAL 163
Query: 446 LGGLSPAQNRSIPPLRYGYVYRL 514
L GLSPA+NR +PPL+Y Y + L
Sbjct: 164 LSGLSPAENRKVPPLKYEYYFAL 186
[16][TOP]
>UniRef100_A2XRC7 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2XRC7_ORYSI
Length = 437
Score = 159 bits (403), Expect = 8e-38
Identities = 78/143 (54%), Positives = 98/143 (68%)
Frame = +2
Query: 86 PQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPS 265
P QHP+VLQ+GGS+ + LA A L+ Y Y EINLNCGCPS VAG G FGA LM P
Sbjct: 115 PAEQHPIVLQIGGSNLDNLAKATELANAYSYDEINLNCGCPSGKVAGHGCFGARLMFDPE 174
Query: 266 VVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAI 445
V +A A AA+ ++P+++KCR+GVD DSYE L FVD V + RHF +HAR A+
Sbjct: 175 FVGDAMS--AIAANCNVPVSIKCRIGVDDRDSYEELCEFVDKVVSKSPTRHFIIHARKAL 232
Query: 446 LGGLSPAQNRSIPPLRYGYVYRL 514
L GLSPA+NR +PPL+Y Y + L
Sbjct: 233 LSGLSPAENRKVPPLKYEYYFAL 255
[17][TOP]
>UniRef100_C1MRW1 Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MRW1_9CHLO
Length = 376
Score = 158 bits (399), Expect = 2e-37
Identities = 85/164 (51%), Positives = 106/164 (64%), Gaps = 18/164 (10%)
Frame = +2
Query: 86 PQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPS 265
P HP VLQLGGSDPE L A A++ PY Y E+NLNCGCPSP VAGKG FGAALM P
Sbjct: 59 PLQTHPSVLQLGGSDPESLGRAAAIAAPYAYDELNLNCGCPSPKVAGKGNFGAALMLEPE 118
Query: 266 VVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRH-------FS 424
+VA+ MA A P+TVKCR+GVD DSY++L FV+TV+A R F+
Sbjct: 119 LVADCVAAMA-ANSGGAPVTVKCRIGVDDVDSYDALCAFVETVAARMPPRRGEDARPLFA 177
Query: 425 VHARAAIL-----------GGLSPAQNRSIPPLRYGYVYRLAAE 523
+HAR A+L GLSPA+NR++PPLR+ +V+ LA +
Sbjct: 178 IHARKALLRRVLYTGSHTTAGLSPAENRTVPPLRHEWVHALARD 221
[18][TOP]
>UniRef100_B9FE76 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9FE76_ORYSJ
Length = 257
Score = 156 bits (395), Expect = 7e-37
Identities = 77/137 (56%), Positives = 96/137 (70%)
Frame = +2
Query: 86 PQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPS 265
P QHP+VLQ+GGS+ + LA A L+ Y Y EINLNCGCPS VAG G FGA LM P
Sbjct: 115 PAEQHPIVLQIGGSNLDNLAKATELANAYSYDEINLNCGCPSGKVAGHGCFGARLMFDPE 174
Query: 266 VVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAI 445
V +A A AA+ ++P++VKCR+GVD DSYE L FVD V + RHF +HAR A+
Sbjct: 175 FVGDAMS--AIAANCNVPVSVKCRIGVDDRDSYEELCEFVDKVVSKSPTRHFIIHARKAL 232
Query: 446 LGGLSPAQNRSIPPLRY 496
L GLSPA+NR++PPL+Y
Sbjct: 233 LSGLSPAENRNVPPLKY 249
[19][TOP]
>UniRef100_B9RVP7 tRNA-dihydrouridine synthase A, putative n=1 Tax=Ricinus communis
RepID=B9RVP7_RICCO
Length = 375
Score = 155 bits (392), Expect = 2e-36
Identities = 77/146 (52%), Positives = 98/146 (67%)
Frame = +2
Query: 77 ASPPQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMK 256
A PQ QHP+VLQ+GGS+ + LA A L+ YGY EIN NCGCPSP VAG G FG LM
Sbjct: 59 AFSPQ-QHPIVLQIGGSNLDNLAKATELATAYGYDEINFNCGCPSPRVAGHGCFGVRLML 117
Query: 257 TPSVVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHAR 436
P V EA + AA+ +P++VKCR+GVD DSY L F+ VS+ +HF +H+R
Sbjct: 118 DPKFVGEAMSVI--AANTDVPVSVKCRIGVDNHDSYNELCDFIYKVSSLSPTKHFIIHSR 175
Query: 437 AAILGGLSPAQNRSIPPLRYGYVYRL 514
A+L G+SPA+NR IPPL+Y Y + L
Sbjct: 176 KALLNGISPAENRKIPPLKYEYYFAL 201
[20][TOP]
>UniRef100_C0GXN3 Dihydrouridine synthase DuS n=1 Tax=Halothiobacillus neapolitanus
c2 RepID=C0GXN3_THINE
Length = 357
Score = 154 bits (389), Expect = 4e-36
Identities = 77/141 (54%), Positives = 97/141 (68%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++HPV LQLGGSDP +LAAA L +GY EINLN GCPS V G+FGA LM TP VV
Sbjct: 61 AEHPVALQLGGSDPSDLAAAAVLGAEWGYDEINLNVGCPSDRVQN-GSFGACLMATPEVV 119
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ R M + D +P+T+K R+G+D DS+E+ RF+D V+ GG F +HAR A L
Sbjct: 120 AKGVRAMQASVD--VPVTLKTRVGIDRSDSFEAFARFIDIVAGQGGCEVFIIHARKAWLD 177
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPLR +VYR+
Sbjct: 178 GLSPKENREIPPLRRDFVYRI 198
[21][TOP]
>UniRef100_Q7XWZ9 OSJNBa0079F16.4 protein n=1 Tax=Oryza sativa RepID=Q7XWZ9_ORYSA
Length = 1708
Score = 154 bits (388), Expect = 5e-36
Identities = 76/136 (55%), Positives = 95/136 (69%)
Frame = +2
Query: 86 PQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPS 265
P QHP+VLQ+GGS+ + LA A L+ Y Y EINLNCGCPS VAG G FGA LM P
Sbjct: 115 PAEQHPIVLQIGGSNLDNLAKATELANAYSYDEINLNCGCPSGKVAGHGCFGARLMFDPE 174
Query: 266 VVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAI 445
V +A A AA+ ++P++VKCR+GVD DSYE L FVD V + RHF +HAR A+
Sbjct: 175 FVGDAMS--AIAANCNVPVSVKCRIGVDDRDSYEELCEFVDKVVSKSPTRHFIIHARKAL 232
Query: 446 LGGLSPAQNRSIPPLR 493
L GLSPA+NR++PPL+
Sbjct: 233 LSGLSPAENRNVPPLK 248
[22][TOP]
>UniRef100_B9HNQ6 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HNQ6_POPTR
Length = 380
Score = 154 bits (388), Expect = 5e-36
Identities = 74/143 (51%), Positives = 96/143 (67%)
Frame = +2
Query: 86 PQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPS 265
P QHP+VLQ+GG++ + +A A L+ YG+ EINLNCGCPS VAG G FGA LM P
Sbjct: 61 PSEQHPIVLQIGGNNLDNIAKATQLANAYGFDEINLNCGCPSAKVAGHGCFGARLMLDPK 120
Query: 266 VVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAI 445
V+EA +A D +P++VKCR+GVD DSY L F+ VS+ +HF +H+R A+
Sbjct: 121 FVSEAMSVIAANTD--VPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPTKHFIIHSRKAL 178
Query: 446 LGGLSPAQNRSIPPLRYGYVYRL 514
L G+SPA NR IPPL+Y Y Y L
Sbjct: 179 LNGISPADNRRIPPLKYEYYYAL 201
[23][TOP]
>UniRef100_B9GFD0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GFD0_POPTR
Length = 378
Score = 152 bits (385), Expect = 1e-35
Identities = 73/140 (52%), Positives = 95/140 (67%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
QHP+VLQ+GG++ + +A A L+ YGY EINLNCGCPSP VAG G FG LM P V
Sbjct: 64 QHPIVLQIGGNNLDNIAKATRLANSYGYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVG 123
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
EA + AA+ +P++VKCR+G+D DSY L F+ VS+ +HF +H+R A+L G
Sbjct: 124 EAMSVI--AANTDVPVSVKCRIGLDDHDSYNELCDFIYKVSSLSPTKHFIIHSRKALLNG 181
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
+SPA NR IPPL+Y Y Y L
Sbjct: 182 ISPADNRRIPPLKYEYYYAL 201
[24][TOP]
>UniRef100_A9RCX2 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RCX2_PHYPA
Length = 373
Score = 152 bits (384), Expect = 1e-35
Identities = 75/143 (52%), Positives = 99/143 (69%)
Frame = +2
Query: 86 PQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPS 265
P+S HP+VLQLGG +PE+L A L+ YGY EINLNCGCPS V G+ +FGAALM P
Sbjct: 65 PESHHPIVLQLGGCNPEKLFRASQLASLYGYDEINLNCGCPSDNVTGR-SFGAALMLEPE 123
Query: 266 VVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAI 445
+V + +A+ + P++VKCR+GVD DSY+ L F+ VS+ +HF +HAR A+
Sbjct: 124 LVGQCVTAIAKGSP-GTPVSVKCRIGVDDFDSYDFLHNFIRIVSSTSPTKHFIIHARKAV 182
Query: 446 LGGLSPAQNRSIPPLRYGYVYRL 514
L GLSP +NR IPPL+Y YV+ L
Sbjct: 183 LKGLSPDENRRIPPLKYDYVFAL 205
[25][TOP]
>UniRef100_UPI0001984A82 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984A82
Length = 433
Score = 152 bits (383), Expect = 2e-35
Identities = 74/140 (52%), Positives = 95/140 (67%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
QHP+VLQ+GG++ + +A A L+ Y Y EINLNCGCPSP VAG G FG LM P VA
Sbjct: 120 QHPIVLQIGGNNLDNIAKATELANSYCYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVA 179
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
EA +A +D +P++VKCR+GVD DSY L F+ VS+ RHF +H+R A+L G
Sbjct: 180 EAMSVIAANSD--VPVSVKCRIGVDDHDSYNELCDFIYKVSSQSPTRHFIIHSRKALLNG 237
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
+SPA NR IPPL+Y Y + L
Sbjct: 238 ISPADNRKIPPLKYEYYFGL 257
[26][TOP]
>UniRef100_A7Q278 Chromosome chr13 scaffold_45, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7Q278_VITVI
Length = 377
Score = 152 bits (383), Expect = 2e-35
Identities = 74/140 (52%), Positives = 95/140 (67%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
QHP+VLQ+GG++ + +A A L+ Y Y EINLNCGCPSP VAG G FG LM P VA
Sbjct: 64 QHPIVLQIGGNNLDNIAKATELANSYCYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVA 123
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
EA +A +D +P++VKCR+GVD DSY L F+ VS+ RHF +H+R A+L G
Sbjct: 124 EAMSVIAANSD--VPVSVKCRIGVDDHDSYNELCDFIYKVSSQSPTRHFIIHSRKALLNG 181
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
+SPA NR IPPL+Y Y + L
Sbjct: 182 ISPADNRKIPPLKYEYYFGL 201
[27][TOP]
>UniRef100_B0U4F1 tRNA-dihydrouridine synthase A n=3 Tax=Xylella fastidiosa
RepID=B0U4F1_XYLFM
Length = 340
Score = 151 bits (382), Expect = 2e-35
Identities = 80/143 (55%), Positives = 98/143 (68%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+ PV LQLGGS+P LA A +++ +GY+EINLNCGCPS V G+FGA LM+ P++VA
Sbjct: 69 EQPVALQLGGSEPALLAKAARIAVDWGYSEINLNCGCPSDRVQA-GSFGACLMREPALVA 127
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ MA A S+P+TVKCRLGV+ DD Y +FVD VS A R VHAR A L G
Sbjct: 128 DCVAAMA--AVVSVPVTVKCRLGVNEDDDYGRFAKFVDWVSRASSSRMIVVHARNAWLQG 185
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR IPPLRY +VYRL E
Sbjct: 186 LSPKENREIPPLRYDWVYRLKRE 208
[28][TOP]
>UniRef100_A0EAZ6 Chromosome undetermined scaffold_87, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0EAZ6_PARTE
Length = 346
Score = 151 bits (382), Expect = 2e-35
Identities = 78/145 (53%), Positives = 100/145 (68%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HPVV QLGG+DPE+LA A ++ G+ EINLN GCPS V GAFGA LMK P +
Sbjct: 62 QVEHPVVCQLGGNDPEKLAKAAQIAEQAGFDEINLNVGCPSERVQD-GAFGACLMKEPHL 120
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ ++M EA +P T+KCRLGVD DSYE + FV+ V G V HF +HAR A L
Sbjct: 121 VAQCMKKMKEAV--KIPCTLKCRLGVDNLDSYEFVRNFVEIVYKEGEVNHFIMHARKAFL 178
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GL+P +NR++PPL+Y +VY+L E
Sbjct: 179 KGLNPHENRTVPPLKYDWVYQLKKE 203
[29][TOP]
>UniRef100_Q9PGB5 tRNA-dihydrouridine synthase A n=1 Tax=Xylella fastidiosa
RepID=DUSA_XYLFA
Length = 340
Score = 151 bits (381), Expect = 3e-35
Identities = 80/143 (55%), Positives = 98/143 (68%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+ PV LQLGGS+P LA A +++ +GY+EINLNCGCPS V G+FGA LM+ P++VA
Sbjct: 69 EQPVALQLGGSEPALLAKAARIAVDWGYSEINLNCGCPSDRVQA-GSFGARLMREPALVA 127
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ MA A S+P+TVKCRLGV+ DD Y +FVD VS A R VHAR A L G
Sbjct: 128 DCVAAMA--AVVSVPVTVKCRLGVNEDDDYGRFAKFVDWVSRASSSRMIVVHARNAWLQG 185
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR IPPLRY +VYRL E
Sbjct: 186 LSPKENREIPPLRYDWVYRLKRE 208
[30][TOP]
>UniRef100_UPI0001BB99C5 tRNA-dihydrouridine synthase A n=1 Tax=Acinetobacter junii SH205
RepID=UPI0001BB99C5
Length = 338
Score = 150 bits (380), Expect = 4e-35
Identities = 80/145 (55%), Positives = 98/145 (67%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HP+VLQLGGS+P+ELA ++ +GY E+NLN GCPS V GA LM P++
Sbjct: 64 QQEHPIVLQLGGSNPQELATCTKMAEDWGYNEVNLNVGCPSDRVQ-NNKIGACLMAEPNL 122
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M +A S+P+TVK R+G+D SYE +L FVDTV AA G HF VHAR AIL
Sbjct: 123 VAECIHSMQKAV--SIPVTVKHRIGIDDMQSYEEMLHFVDTV-AATGCTHFIVHARIAIL 179
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPLRY VYRL E
Sbjct: 180 QGLSPKENREVPPLRYEDVYRLKLE 204
[31][TOP]
>UniRef100_Q8PFF8 tRNA-dihydrouridine synthase A n=1 Tax=Xanthomonas axonopodis pv.
citri RepID=DUSA_XANAC
Length = 334
Score = 150 bits (380), Expect = 4e-35
Identities = 82/143 (57%), Positives = 94/143 (65%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+ LQLGGSDP LA A A++ +G+ EINLNCGCPS V G FGA LM+ P++VA
Sbjct: 65 EHPLALQLGGSDPALLAQAAAIAQEWGFDEINLNCGCPSDRVQA-GRFGACLMREPALVA 123
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E M A LPITVKCRLGVD DD Y RFVD V AAG VHAR A L G
Sbjct: 124 ECVAAMCAAT--HLPITVKCRLGVDDDDDYALFARFVDQVVAAGAAM-VVVHARNAWLKG 180
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR +PPLRY + YRL E
Sbjct: 181 LSPKENREVPPLRYDWAYRLKQE 203
[32][TOP]
>UniRef100_Q3J558 tRNA-Dihydrouridine synthase n=1 Tax=Rhodobacter sphaeroides 2.4.1
RepID=Q3J558_RHOS4
Length = 313
Score = 150 bits (379), Expect = 5e-35
Identities = 81/139 (58%), Positives = 98/139 (70%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+++HPV LQLGGSDP ELA AV L+ PYGY EINLN GCPS V G FGA LM+ PS+
Sbjct: 45 EAEHPVALQLGGSDPAELAQAVRLAEPYGYDEINLNVGCPSDRVQ-SGCFGAVLMERPSL 103
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M A+ +P+TVKCR+GVD + E L F++TV+AA GVRHF +HAR A L
Sbjct: 104 VADCVAAM--IAESPVPVTVKCRIGVDEQEPSEVLPAFLETVAAA-GVRHFVIHARKAWL 160
Query: 449 GGLSPAQNRSIPPLRYGYV 505
GLSP +NR IPPL Y V
Sbjct: 161 QGLSPRENREIPPLDYPLV 179
[33][TOP]
>UniRef100_A3PH77 TIM-barrel protein, yjbN family n=1 Tax=Rhodobacter sphaeroides
ATCC 17029 RepID=A3PH77_RHOS1
Length = 331
Score = 150 bits (379), Expect = 5e-35
Identities = 81/139 (58%), Positives = 98/139 (70%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+++HPV LQLGGSDP ELA AV L+ PYGY EINLN GCPS V G FGA LM+ PS+
Sbjct: 63 EAEHPVALQLGGSDPAELAQAVRLAEPYGYDEINLNVGCPSDRVQ-SGCFGAVLMERPSL 121
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M A+ +P+TVKCR+GVD + E L F++TV+AA GVRHF +HAR A L
Sbjct: 122 VADCVAAM--IAESPVPVTVKCRIGVDEQEPSEVLPAFLETVAAA-GVRHFVIHARKAWL 178
Query: 449 GGLSPAQNRSIPPLRYGYV 505
GLSP +NR IPPL Y V
Sbjct: 179 QGLSPRENREIPPLDYPLV 197
[34][TOP]
>UniRef100_Q87AY2 tRNA-dihydrouridine synthase A n=2 Tax=Xylella fastidiosa
RepID=DUSA_XYLFT
Length = 332
Score = 150 bits (379), Expect = 5e-35
Identities = 79/143 (55%), Positives = 98/143 (68%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+ PV LQLGGS+P LA A ++++ +GY+EINLNCGCPS V G+FGA LM+ P++VA
Sbjct: 69 EQPVALQLGGSEPALLAKAASIAVDWGYSEINLNCGCPSDRVQA-GSFGACLMREPALVA 127
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ MA A S+P+TVKCRLGV+ DD Y +FVD V A R VHAR A L G
Sbjct: 128 DCVAAMA--AVVSVPVTVKCRLGVNEDDDYGRFAKFVDWVIGASSSRMIVVHARNAWLQG 185
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR IPPLRY +VYRL E
Sbjct: 186 LSPKENREIPPLRYDWVYRLKRE 208
[35][TOP]
>UniRef100_Q7NZJ8 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum
RepID=Q7NZJ8_CHRVO
Length = 347
Score = 150 bits (378), Expect = 7e-35
Identities = 79/145 (54%), Positives = 100/145 (68%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+++HPV LQLGGS+P ELA L+ +GY E+NLN GCPS V KGAFGA LM P +
Sbjct: 77 EAEHPVALQLGGSEPAELATCAKLAQQWGYDEVNLNVGCPSERVQ-KGAFGACLMAEPQL 135
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
V++ + M +A D + +TVK R+G+D + Y+ L FVDTV+ A G R F VHAR AIL
Sbjct: 136 VSDCVKAMRDAVD--IDVTVKHRIGIDQIEHYDYLREFVDTVAEA-GCRTFIVHARNAIL 192
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR IPPL+Y YVYRL E
Sbjct: 193 KGLSPKENREIPPLKYDYVYRLKRE 217
[36][TOP]
>UniRef100_UPI000169389B tRNA-dihydrouridine synthase A n=1 Tax=Xanthomonas oryzae pv.
oryzicola BLS256 RepID=UPI000169389B
Length = 334
Score = 149 bits (377), Expect = 9e-35
Identities = 81/143 (56%), Positives = 94/143 (65%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+ LQLGGSDP LA A A++ +G+ EINLNCGCPS V G FGA LM+ P++VA
Sbjct: 65 EHPLALQLGGSDPAWLAQAAAIAQEWGFDEINLNCGCPSDRVQA-GRFGACLMREPALVA 123
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E M A +PITVKCRLGVD DD Y RFVD V AAG VHAR A L G
Sbjct: 124 ECVAAMCTAT--HVPITVKCRLGVDDDDDYALFARFVDQVVAAGAAM-VVVHARNAWLKG 180
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR +PPLRY + YRL E
Sbjct: 181 LSPKENREVPPLRYDWAYRLKQE 203
[37][TOP]
>UniRef100_Q3BN14 Putative dihydrouridine synthase n=1 Tax=Xanthomonas campestris pv.
vesicatoria str. 85-10 RepID=Q3BN14_XANC5
Length = 334
Score = 149 bits (377), Expect = 9e-35
Identities = 81/143 (56%), Positives = 94/143 (65%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+ LQLGGSDP LA A A++ +G+ EINLNCGCPS V G FGA LM+ P++VA
Sbjct: 65 EHPLALQLGGSDPALLAQAAAIAQEWGFDEINLNCGCPSDRVQA-GRFGACLMREPALVA 123
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E M A +PITVKCRLGVD DD Y RFVD V AAG VHAR A L G
Sbjct: 124 ECVAAMCAAT--HVPITVKCRLGVDDDDDYALFARFVDQVVAAGAAM-VVVHARNAWLKG 180
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR +PPLRY + YRL E
Sbjct: 181 LSPKENREVPPLRYDWAYRLKQE 203
[38][TOP]
>UniRef100_Q3R025 Dihydrouridine synthase, DuS n=1 Tax=Xylella fastidiosa subsp.
sandyi Ann-1 RepID=Q3R025_XYLFA
Length = 332
Score = 149 bits (377), Expect = 9e-35
Identities = 79/143 (55%), Positives = 97/143 (67%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+ PV LQLGGS+P LA A +++ +GY+EINLNCGCPS V G+FGA LM+ P++VA
Sbjct: 69 EQPVALQLGGSEPALLAKAARIAVDWGYSEINLNCGCPSDRVQA-GSFGACLMREPALVA 127
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ MA A S+P+TVKCRLGV+ DD Y +FVD V A R VHAR A L G
Sbjct: 128 DCVAAMA--AVVSVPVTVKCRLGVNEDDDYGRFAKFVDWVIGASSSRMIVVHARNAWLQG 185
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR IPPLRY +VYRL E
Sbjct: 186 LSPKENREIPPLRYDWVYRLKRE 208
[39][TOP]
>UniRef100_B9KM99 TIM-barrel protein, yjbN family n=1 Tax=Rhodobacter sphaeroides
KD131 RepID=B9KM99_RHOSK
Length = 313
Score = 149 bits (376), Expect = 1e-34
Identities = 80/139 (57%), Positives = 98/139 (70%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+++HPV LQLGGSDP ELA AV L+ PYGY EINLN GCPS V G FGA LM+ PS+
Sbjct: 45 EAEHPVALQLGGSDPAELAQAVRLAEPYGYDEINLNVGCPSDRVQ-SGCFGAVLMERPSL 103
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M A+ +P+TVKCR+GVD + E L F++T++AA GVRHF +HAR A L
Sbjct: 104 VADCVAAM--IAESPVPVTVKCRIGVDEQEPSEVLPAFLETLAAA-GVRHFVIHARKAWL 160
Query: 449 GGLSPAQNRSIPPLRYGYV 505
GLSP +NR IPPL Y V
Sbjct: 161 QGLSPRENREIPPLDYPLV 179
[40][TOP]
>UniRef100_B2SSA7 tRNA-dihydrouridine synthase A n=3 Tax=Xanthomonas oryzae pv.
oryzae RepID=B2SSA7_XANOP
Length = 334
Score = 149 bits (376), Expect = 1e-34
Identities = 81/143 (56%), Positives = 94/143 (65%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+ LQLGGSDP LA A A++ +G+ EINLNCGCPS V G FGA LM+ P++VA
Sbjct: 65 EHPLALQLGGSDPALLAQAAAIAQEWGFDEINLNCGCPSDRVQA-GRFGACLMREPALVA 123
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E M A +PITVKCRLGVD DD Y RFVD V AAG VHAR A L G
Sbjct: 124 ECVAAMCTAT--HVPITVKCRLGVDDDDDYALFARFVDQVVAAGAAM-VVVHARNAWLKG 180
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR +PPLRY + YRL E
Sbjct: 181 LSPKENREVPPLRYDWAYRLNQE 203
[41][TOP]
>UniRef100_C0VKS0 tRNA-dihydrouridine synthase A n=1 Tax=Acinetobacter sp. ATCC 27244
RepID=C0VKS0_9GAMM
Length = 343
Score = 149 bits (376), Expect = 1e-34
Identities = 79/145 (54%), Positives = 98/145 (67%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HP+VLQLGGS+P+ELA ++ +GY E+NLN GCPS V GA LM P++
Sbjct: 68 KEEHPIVLQLGGSNPQELATCTKMAEDWGYDEVNLNVGCPSDRVQ-NNKIGACLMAEPNL 126
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M +A S+P+TVK R+G+D SYE +L FVDTV AA G HF VHAR AIL
Sbjct: 127 VAECIHSMQKAV--SIPVTVKHRIGIDDMQSYEEMLHFVDTV-AATGCTHFIVHARIAIL 183
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPLRY VYRL E
Sbjct: 184 QGLSPKENREVPPLRYDDVYRLKQE 208
[42][TOP]
>UniRef100_C1CX00 Putative tRNA-dihydrouridine synthase A n=1 Tax=Deinococcus deserti
VCD115 RepID=C1CX00_DEIDV
Length = 346
Score = 148 bits (374), Expect = 2e-34
Identities = 83/143 (58%), Positives = 95/143 (66%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HPV LQLGGSDP LA ++ YGY EINLNCGCPS V+ G+FGA LM TP VVA
Sbjct: 67 EHPVALQLGGSDPAALAECTRMAEDYGYDEINLNCGCPSDRVS-SGSFGACLMGTPDVVA 125
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
A M LP+TVK R+G+D DSYE L RFV TV AA G + F VHAR A L G
Sbjct: 126 RAVEAMRGVT--RLPVTVKHRIGIDDLDSYEHLTRFVRTVEAA-GCQTFIVHARKAWLSG 182
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR IPPLRY V +L A+
Sbjct: 183 LSPKENREIPPLRYEVVEQLKAD 205
[43][TOP]
>UniRef100_B0T6V6 TIM-barrel protein, yjbN family n=1 Tax=Caulobacter sp. K31
RepID=B0T6V6_CAUSK
Length = 325
Score = 148 bits (373), Expect = 3e-34
Identities = 80/143 (55%), Positives = 95/143 (66%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
QHPV LQLGGS+P +LAAA + +GY EINLN GCPS V G FGA LM+ P +VA
Sbjct: 47 QHPVALQLGGSEPADLAAAARIGEDFGYDEINLNVGCPSDRVQ-SGRFGACLMREPKLVA 105
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ M A S+P+TVKCR+GVD D +SL VD +SA GV HF VHAR A L G
Sbjct: 106 DCMAAMTAAV--SVPVTVKCRIGVDDQDPEQSLFELVD-LSAQAGVTHFVVHARKAWLKG 162
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR +PPL Y V+RL AE
Sbjct: 163 LSPKENRDVPPLDYPLVHRLKAE 185
[44][TOP]
>UniRef100_Q9FI41 Emb|CAB87804.1 n=1 Tax=Arabidopsis thaliana RepID=Q9FI41_ARATH
Length = 387
Score = 148 bits (373), Expect = 3e-34
Identities = 72/140 (51%), Positives = 93/140 (66%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
QHP+VLQ+GG + E LA A L+ Y Y EIN NCGCPSP V+G+G FGA LM P V
Sbjct: 65 QHPIVLQIGGRNLENLAKATRLANAYAYDEINFNCGCPSPKVSGRGCFGALLMLDPKFVG 124
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
EA + AA+ + +TVKCR+GVD DSY L F+ VS+ +HF +H+R A+L G
Sbjct: 125 EAMSVI--AANTNAAVTVKCRIGVDDHDSYNELCDFIHIVSSLSPTKHFIIHSRKALLSG 182
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
LSP+ NR IPPL+Y + + L
Sbjct: 183 LSPSDNRRIPPLKYEFFFAL 202
[45][TOP]
>UniRef100_A2WAH2 TIM-barrel protein, yjbN family (Fragment) n=1 Tax=Burkholderia
dolosa AUO158 RepID=A2WAH2_9BURK
Length = 242
Score = 147 bits (372), Expect = 3e-34
Identities = 79/141 (56%), Positives = 98/141 (69%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
S+ PV LQLGGS+P++LA A L +GY EINLNCGCPS V +GAFGA LMK P +V
Sbjct: 62 SESPVALQLGGSEPDDLARAAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMKEPQLV 120
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ + M +A S+P+TVK R+GVD + Y + FV T++ A G R F VHAR AIL
Sbjct: 121 ADCVKAMRDAV--SVPVTVKHRIGVDAIEDYAFVRDFVGTIADA-GCRTFIVHARNAILK 177
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL+Y Y YRL
Sbjct: 178 GLSPKENREIPPLKYDYAYRL 198
[46][TOP]
>UniRef100_Q1IWU4 tRNA-dihydrouridine synthase n=1 Tax=Deinococcus geothermalis DSM
11300 RepID=Q1IWU4_DEIGD
Length = 344
Score = 147 bits (371), Expect = 4e-34
Identities = 81/144 (56%), Positives = 97/144 (67%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++HPV LQLGGSDP LA ++ +GY E+NLNCGCPS V G+FGA LM TP VV
Sbjct: 61 AEHPVALQLGGSDPAALAECARIAQDWGYDEVNLNCGCPSDRVQ-NGSFGACLMATPDVV 119
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A A M A +LP+TVK R+G+D DSYE L RFV TV+ A G + F VHAR A L
Sbjct: 120 ARAVEAMRGAT--TLPVTVKHRIGIDDLDSYEHLTRFVRTVAEA-GCQTFIVHARKAWLS 176
Query: 452 GLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR IPPLRY V +L A+
Sbjct: 177 GLSPKENREIPPLRYEVVRQLKAD 200
[47][TOP]
>UniRef100_A3VJX6 TRNA-dihydrouridine synthase A n=1 Tax=Rhodobacterales bacterium
HTCC2654 RepID=A3VJX6_9RHOB
Length = 313
Score = 147 bits (371), Expect = 4e-34
Identities = 87/165 (52%), Positives = 104/165 (63%)
Frame = +2
Query: 29 VGAVASARDGVPPPPSASPPQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCP 208
V A A R GV P S+HPV LQLGGSDPEELA A +++ GY E+NLN GCP
Sbjct: 27 VTAPALVRGGVTHLLDFDP--SEHPVALQLGGSDPEELAEATRMAVDRGYDEVNLNVGCP 84
Query: 209 SPTVAGKGAFGAALMKTPSVVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVD 388
S V G FGA L+K P +VA T M AA + +TVKCR+GVD D+ L F+D
Sbjct: 85 SDRVQ-SGTFGAVLLKDPDLVARCTAAMIRAAG-PVEVTVKCRIGVDDQDAEAVLPDFLD 142
Query: 389 TVSAAGGVRHFSVHARAAILGGLSPAQNRSIPPLRYGYVYRLAAE 523
VS A GVR F++HAR A L GLSP +NR IPPL Y V+R+ AE
Sbjct: 143 RVSDA-GVRRFTIHARKAWLQGLSPKENRDIPPLDYPLVHRMKAE 186
[48][TOP]
>UniRef100_UPI0001AEF41C tRNA-dihydrouridine synthase A n=1 Tax=Acinetobacter baumannii
AB900 RepID=UPI0001AEF41C
Length = 334
Score = 147 bits (370), Expect = 6e-34
Identities = 78/143 (54%), Positives = 96/143 (67%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+VLQLGGS+P+ELA ++ +GY E+NLN GCPS V GA LM P +VA
Sbjct: 62 EHPIVLQLGGSNPQELATCTKMAEDWGYDEVNLNVGCPSDRVQ-NNKIGACLMAEPDLVA 120
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E M +A ++P+TVK R+G+D SYE +L FVDTV AA G HF VHAR AIL G
Sbjct: 121 ECIHSMQKAV--NIPVTVKHRIGIDDMQSYEEMLHFVDTV-AATGCTHFVVHARIAILKG 177
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR +PPLRY VYRL E
Sbjct: 178 LSPKENREVPPLRYEDVYRLKQE 200
[49][TOP]
>UniRef100_B7H033 tRNA-dihydrouridine synthase A n=1 Tax=Acinetobacter baumannii
AB307-0294 RepID=B7H033_ACIB3
Length = 334
Score = 147 bits (370), Expect = 6e-34
Identities = 78/143 (54%), Positives = 96/143 (67%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+VLQLGGS+P+ELA ++ +GY E+NLN GCPS V GA LM P +VA
Sbjct: 62 EHPIVLQLGGSNPQELATCTKMAEDWGYDEVNLNIGCPSDRVQ-NNKIGACLMAEPDLVA 120
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E M +A ++P+TVK R+G+D SYE +L FVDTV AA G HF VHAR AIL G
Sbjct: 121 ECIHSMQKAV--NIPVTVKHRIGIDDMQSYEEMLHFVDTV-AATGCTHFVVHARIAILKG 177
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR +PPLRY VYRL E
Sbjct: 178 LSPKENREVPPLRYEDVYRLKQE 200
[50][TOP]
>UniRef100_B0VKM9 tRNA-dihydrouridine synthase A n=1 Tax=Acinetobacter baumannii SDF
RepID=B0VKM9_ACIBS
Length = 339
Score = 147 bits (370), Expect = 6e-34
Identities = 78/143 (54%), Positives = 96/143 (67%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+VLQLGGS+P+ELA ++ +GY E+NLN GCPS V GA LM P +VA
Sbjct: 67 EHPIVLQLGGSNPQELATCTKMAEDWGYDEVNLNVGCPSDRVQ-NNKIGACLMAEPDLVA 125
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E M +A ++P+TVK R+G+D SYE +L FVDTV AA G HF VHAR AIL G
Sbjct: 126 ECIHSMQKAV--NIPVTVKHRIGIDDMQSYEEMLHFVDTV-AATGCTHFVVHARIAILKG 182
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR +PPLRY VYRL E
Sbjct: 183 LSPKENREVPPLRYEDVYRLKQE 205
[51][TOP]
>UniRef100_B0V5K1 tRNA-dihydrouridine synthase A n=2 Tax=Acinetobacter baumannii
RepID=B0V5K1_ACIBY
Length = 338
Score = 147 bits (370), Expect = 6e-34
Identities = 78/143 (54%), Positives = 96/143 (67%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+VLQLGGS+P+ELA ++ +GY E+NLN GCPS V GA LM P +VA
Sbjct: 66 EHPIVLQLGGSNPQELATCTKMAEDWGYDEVNLNIGCPSDRVQ-NNKIGACLMAEPDLVA 124
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E M +A ++P+TVK R+G+D SYE +L FVDTV AA G HF VHAR AIL G
Sbjct: 125 ECIHSMQKAV--NIPVTVKHRIGIDDMQSYEEMLHFVDTV-AATGCTHFVVHARIAILKG 181
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR +PPLRY VYRL E
Sbjct: 182 LSPKENREVPPLRYEDVYRLKQE 204
[52][TOP]
>UniRef100_D0CAB0 tRNA-dihydrouridine synthase A n=1 Tax=Acinetobacter baumannii ATCC
19606 RepID=D0CAB0_ACIBA
Length = 339
Score = 147 bits (370), Expect = 6e-34
Identities = 78/143 (54%), Positives = 96/143 (67%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+VLQLGGS+P+ELA ++ +GY E+NLN GCPS V GA LM P +VA
Sbjct: 67 EHPIVLQLGGSNPQELATCTKMAEDWGYDEVNLNVGCPSDRVQ-NNKIGACLMAEPDLVA 125
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E M +A ++P+TVK R+G+D SYE +L FVDTV AA G HF VHAR AIL G
Sbjct: 126 ECIHSMQKAV--NIPVTVKHRIGIDDMQSYEEMLHFVDTV-AATGCTHFVVHARIAILKG 182
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR +PPLRY VYRL E
Sbjct: 183 LSPKENREVPPLRYEDVYRLKQE 205
[53][TOP]
>UniRef100_D0BVW2 tRNA-dihydrouridine synthase A n=1 Tax=Acinetobacter sp. RUH2624
RepID=D0BVW2_9GAMM
Length = 338
Score = 147 bits (370), Expect = 6e-34
Identities = 78/143 (54%), Positives = 96/143 (67%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+VLQLGGS+P+ELA ++ +GY E+NLN GCPS V GA LM P +VA
Sbjct: 66 EHPIVLQLGGSNPQELATCTKMAEDWGYDEVNLNVGCPSDRVQ-NNKIGACLMAEPDLVA 124
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E M +A ++P+TVK R+G+D SYE +L FVDTV AA G HF VHAR AIL G
Sbjct: 125 ECIHSMQKAV--NIPVTVKHRIGIDDMQSYEEMLHFVDTV-AATGCTHFVVHARIAILKG 181
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR +PPLRY VYRL E
Sbjct: 182 LSPKENREVPPLRYEDVYRLKQE 204
[54][TOP]
>UniRef100_UPI0001BB5C28 tRNA-dihydrouridine synthase A n=1 Tax=Acinetobacter calcoaceticus
RUH2202 RepID=UPI0001BB5C28
Length = 330
Score = 146 bits (368), Expect = 1e-33
Identities = 78/143 (54%), Positives = 96/143 (67%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+VLQLGGS+P+ELA ++ +GY E+NLN GCPS V GA LM P +VA
Sbjct: 62 EHPIVLQLGGSNPQELATCTKMAEDWGYGEVNLNVGCPSDRVQ-NNKIGACLMAEPDLVA 120
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E M +A ++P+TVK R+G+D SYE +L FVDTV AA G HF VHAR AIL G
Sbjct: 121 ECIHTMQKAV--NIPVTVKHRIGIDDMHSYEEMLHFVDTV-AATGCTHFVVHARIAILKG 177
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR +PPLRY VYRL E
Sbjct: 178 LSPKENREVPPLRYEDVYRLKQE 200
[55][TOP]
>UniRef100_A3M271 tRNA-dihydrouridine synthase A n=2 Tax=Acinetobacter baumannii ATCC
17978 RepID=A3M271_ACIBT
Length = 334
Score = 146 bits (368), Expect = 1e-33
Identities = 78/143 (54%), Positives = 95/143 (66%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+VLQLGGS P+ELA ++ +GY E+NLN GCPS V GA LM P +VA
Sbjct: 62 EHPIVLQLGGSTPQELATCTKMAEDWGYDEVNLNVGCPSDRVQ-NNKIGACLMAEPDLVA 120
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E M +A ++P+TVK R+G+D SYE +L FVDTV AA G HF VHAR AIL G
Sbjct: 121 ECIHSMQKAV--NIPVTVKHRIGIDDMQSYEEMLHFVDTV-AATGCTHFVVHARIAILKG 177
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR +PPLRY VYRL E
Sbjct: 178 LSPKENREVPPLRYEDVYRLKQE 200
[56][TOP]
>UniRef100_Q0AR40 TIM-barrel protein, yjbN family n=1 Tax=Maricaulis maris MCS10
RepID=Q0AR40_MARMM
Length = 353
Score = 145 bits (366), Expect = 2e-33
Identities = 79/144 (54%), Positives = 98/144 (68%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++HPV +QLGGSDP ELA A + +GY EINLN GCPS V G FGA LM+ P +V
Sbjct: 83 AEHPVAIQLGGSDPGELAQASKTAEGFGYCEINLNVGCPSDRVQ-SGRFGACLMQEPDLV 141
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ M +A S+P+TVKCR+GVD + ++L VDTV AA GV F+VHAR A L
Sbjct: 142 ADCVAAMQDAV--SVPVTVKCRIGVDDQEPEQALFTLVDTV-AARGVTSFAVHARKAWLK 198
Query: 452 GLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NRS+PPL Y V+RL AE
Sbjct: 199 GLSPKENRSVPPLDYALVHRLKAE 222
[57][TOP]
>UniRef100_C6BGZ4 TIM-barrel protein, yjbN family n=1 Tax=Ralstonia pickettii 12D
RepID=C6BGZ4_RALP1
Length = 346
Score = 145 bits (366), Expect = 2e-33
Identities = 76/140 (54%), Positives = 98/140 (70%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HPV LQLGGS+P++LA A L +GY EINLNCGCPS V +GAFGA LM P +VA
Sbjct: 66 EHPVALQLGGSEPDDLAQAARLGQQWGYKEINLNCGCPSERVQ-RGAFGACLMAEPKLVA 124
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ + M +A S+P+TVK R+G+D ++Y+ + FV T++ A G F VHAR AIL G
Sbjct: 125 QGVKAMRDAV--SIPVTVKHRIGIDAIETYDFVRDFVGTIAEA-GCETFIVHARNAILKG 181
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
LSP +NR IPPLRY VY+L
Sbjct: 182 LSPKENREIPPLRYEVVYQL 201
[58][TOP]
>UniRef100_B7J4N8 tRNA-dihydrouridine synthase A n=1 Tax=Acidithiobacillus
ferrooxidans ATCC 23270 RepID=B7J4N8_ACIF2
Length = 330
Score = 145 bits (366), Expect = 2e-33
Identities = 75/141 (53%), Positives = 100/141 (70%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++HP++LQLGG DP + AA ++ YGY +NLN GCPSP V KG+FGA LM TP +V
Sbjct: 70 AEHPLILQLGGDDPHAMHAAGRMARAYGYDGLNLNVGCPSPRVQ-KGSFGACLMTTPDLV 128
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
AE M E+ LP++VK RLG+D ++ Y +L FV+TV+ A G RHF VHAR A L
Sbjct: 129 AELVAAMGES---GLPVSVKHRLGLDREEDYAALRAFVETVATA-GCRHFIVHARNAWLK 184
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSPA+NR +PPLR+ +V++L
Sbjct: 185 GLSPAENRDVPPLRWDWVHQL 205
[59][TOP]
>UniRef100_B5EJY3 Dihydrouridine synthase DuS n=1 Tax=Acidithiobacillus ferrooxidans
ATCC 53993 RepID=B5EJY3_ACIF5
Length = 325
Score = 145 bits (366), Expect = 2e-33
Identities = 75/141 (53%), Positives = 100/141 (70%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++HP++LQLGG DP + AA ++ YGY +NLN GCPSP V KG+FGA LM TP +V
Sbjct: 65 AEHPLILQLGGDDPHAMHAAGRMARAYGYDGLNLNVGCPSPRVQ-KGSFGACLMTTPDLV 123
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
AE M E+ LP++VK RLG+D ++ Y +L FV+TV+ A G RHF VHAR A L
Sbjct: 124 AELVAAMGES---GLPVSVKHRLGLDREEDYAALRAFVETVATA-GCRHFIVHARNAWLK 179
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSPA+NR +PPLR+ +V++L
Sbjct: 180 GLSPAENRDVPPLRWDWVHQL 200
[60][TOP]
>UniRef100_B2HTE2 tRNA-dihydrouridine synthase n=1 Tax=Acinetobacter baumannii ACICU
RepID=B2HTE2_ACIBC
Length = 334
Score = 145 bits (366), Expect = 2e-33
Identities = 77/143 (53%), Positives = 95/143 (66%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+VLQLGGS+P+ELA ++ +GY E+NLN GCPS V GA LM P +VA
Sbjct: 62 EHPIVLQLGGSNPQELATCTKMAEDWGYDEVNLNVGCPSDRVQ-NNKIGACLMAEPDLVA 120
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E M + ++P+TVK R+G+D SYE +L FVDTV AA G HF VHAR AIL G
Sbjct: 121 ECIHSMQKVV--NIPVTVKHRIGIDDMQSYEEMLHFVDTV-AATGCTHFVVHARIAILKG 177
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR +PPLRY VYRL E
Sbjct: 178 LSPKENREVPPLRYEDVYRLKQE 200
[61][TOP]
>UniRef100_B0TU94 TIM-barrel protein, yjbN family n=1 Tax=Shewanella halifaxensis
HAW-EB4 RepID=B0TU94_SHEHH
Length = 328
Score = 145 bits (366), Expect = 2e-33
Identities = 77/142 (54%), Positives = 94/142 (66%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HP+ LQLGGS+P +LAA L+ GY E+NLN GCPS V G FGA LM P +
Sbjct: 58 QEEHPLALQLGGSNPADLAACAKLAAERGYDEVNLNVGCPSDRVQ-NGRFGACLMAEPEL 116
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M + D +PITVK R+G+D DSYE L +F+DTV AA G F++HAR A L
Sbjct: 117 VAECVSAMKQVVD--IPITVKTRIGIDEQDSYEFLTQFIDTVKAA-GCEEFTIHARKAWL 173
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 174 QGLSPKENREIPPLDYERVYQL 195
[62][TOP]
>UniRef100_B5IIY4 tRNA-dihydrouridine synthase A n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5IIY4_9CHRO
Length = 345
Score = 145 bits (366), Expect = 2e-33
Identities = 82/140 (58%), Positives = 94/140 (67%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+ P+ LQLGG DP LA A L+ +GY E+NLN GCPS V KG FGA LM P VA
Sbjct: 77 EKPIALQLGGDDPALLAEACRLAEAWGYDEVNLNVGCPSDRVR-KGRFGACLMAHPEQVA 135
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
MA A SLP+TVK R+G+D DSY LL FVDTV+AAG R FSVHAR A L G
Sbjct: 136 ACVAAMAAAC--SLPVTVKHRIGIDHHDSYPELLGFVDTVAAAGACR-FSVHARKAWLEG 192
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
L P QNR+IPPLRY +V+RL
Sbjct: 193 LDPKQNRTIPPLRYDWVHRL 212
[63][TOP]
>UniRef100_A3YWH6 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 5701
RepID=A3YWH6_9SYNE
Length = 315
Score = 145 bits (366), Expect = 2e-33
Identities = 80/140 (57%), Positives = 95/140 (67%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+ LQLGG DP LA + L+ +GY EINLN GCPSP V +G FGA LM P VA
Sbjct: 47 EHPLALQLGGDDPALLAESAQLAAAWGYDEINLNVGCPSPKVQ-QGRFGACLMADPDRVA 105
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
MA A+ SLP+TVK R+G+D DSYE LL FVD V+ AG R FSVHAR A L G
Sbjct: 106 RCVEAMANAS--SLPVTVKHRIGIDDQDSYELLLAFVDKVAGAGASR-FSVHARKAWLHG 162
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
L P QNR+IPPLR+ V++L
Sbjct: 163 LDPKQNRTIPPLRHDLVHQL 182
[64][TOP]
>UniRef100_B1XY95 TIM-barrel protein, yjbN family n=1 Tax=Leptothrix cholodnii SP-6
RepID=B1XY95_LEPCP
Length = 342
Score = 145 bits (365), Expect = 2e-33
Identities = 77/140 (55%), Positives = 98/140 (70%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HPV LQLGGSDP +LAA L+ +GY E+NLNCGCPS V KGAFGA LM P++VA
Sbjct: 70 EHPVALQLGGSDPADLAACARLAQRWGYDEVNLNCGCPSERVQ-KGAFGACLMAEPALVA 128
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ + M +A D +P+TVK R+G+D +SY+ + FV T++ A G F VHAR A L G
Sbjct: 129 DGVKAMRDAVD--VPVTVKHRIGIDRGESYDFVRDFVGTLADA-GCEVFIVHARNAWLQG 185
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
LSP +NR IPPLRY VY+L
Sbjct: 186 LSPKENRDIPPLRYEQVYQL 205
[65][TOP]
>UniRef100_Q8P3X4 tRNA-dihydrouridine synthase A n=3 Tax=Xanthomonas campestris pv.
campestris RepID=DUSA_XANCP
Length = 335
Score = 145 bits (365), Expect = 2e-33
Identities = 77/143 (53%), Positives = 92/143 (64%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+ LQLGGSDP LA A ++ +GY EINLNCGCPS V G FGA LM+ P++VA
Sbjct: 66 EHPLALQLGGSDPALLAQAAQIAQAWGYDEINLNCGCPSDRVQA-GRFGACLMREPALVA 124
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ M A +LP+TVKCRLGVD DD Y F+D V AG VHAR A L G
Sbjct: 125 DCVAAMCAAT--ALPVTVKCRLGVDDDDDYAVFAGFIDQVVGAGAAM-VVVHARNAWLKG 181
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR +PPLRY + YRL E
Sbjct: 182 LSPKENREVPPLRYDWAYRLKQE 204
[66][TOP]
>UniRef100_A5L826 tRNA-dihydrouridine synthase A n=1 Tax=Vibrionales bacterium SWAT-3
RepID=A5L826_9GAMM
Length = 315
Score = 145 bits (365), Expect = 2e-33
Identities = 73/142 (51%), Positives = 92/142 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HP+ LQLGGS+P +LAA L+ GY E+NLN GCPS V G FGA LM P +
Sbjct: 44 EQEHPLALQLGGSNPVDLAACAKLAAERGYDEVNLNVGCPSDRVQN-GRFGACLMAEPEL 102
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M E D +PITVK R+G+D DSYE L +F+ TVS GG F++HAR A L
Sbjct: 103 VADCVLAMKEVTD--IPITVKTRIGIDDQDSYEFLTKFISTVSEKGGCEQFTIHARKAWL 160
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y++
Sbjct: 161 SGLSPKENREIPPLDYDRAYQI 182
[67][TOP]
>UniRef100_A3UWI3 NifR3/Smm1 family protein n=1 Tax=Vibrio splendidus 12B01
RepID=A3UWI3_VIBSP
Length = 334
Score = 145 bits (365), Expect = 2e-33
Identities = 75/142 (52%), Positives = 92/142 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HP+ LQLGGS+P +LAA L+ GY EINLN GCPS V G FGA LM P +
Sbjct: 63 EQEHPLALQLGGSNPVDLAACAKLAGERGYDEINLNVGCPSDRVQN-GRFGACLMAEPEL 121
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M E D +PITVK R+G+D DSYE L +FV TVS GG F++HAR A L
Sbjct: 122 VADCVSAMKEVTD--IPITVKTRIGIDDQDSYEFLTKFVSTVSEKGGCEQFTIHARKAWL 179
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y++
Sbjct: 180 SGLSPKENREIPPLDYDRAYQI 201
[68][TOP]
>UniRef100_C5CWK2 TIM-barrel protein, yjbN family n=1 Tax=Variovorax paradoxus S110
RepID=C5CWK2_VARPS
Length = 333
Score = 144 bits (364), Expect = 3e-33
Identities = 80/145 (55%), Positives = 97/145 (66%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HPV LQLGGS+P +LA L +GY EINLNCGCPS V +GAFGA LM P++
Sbjct: 64 EEEHPVALQLGGSEPADLAHCARLGEEWGYDEINLNCGCPSERVQ-RGAFGACLMAEPAL 122
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ + M +A LP+TVK R+G+D +SYE + FV VS A G R F VHAR A L
Sbjct: 123 VADCVKAMVDAT--RLPVTVKHRIGIDKIESYEFVRDFVGAVSEA-GCRGFIVHARNAWL 179
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP QNR IPPLRY V+RL E
Sbjct: 180 QGLSPKQNREIPPLRYELVHRLKHE 204
[69][TOP]
>UniRef100_B4SSQ0 Dihydrouridine synthase DuS n=1 Tax=Stenotrophomonas maltophilia
R551-3 RepID=B4SSQ0_STRM5
Length = 343
Score = 144 bits (364), Expect = 3e-33
Identities = 76/145 (52%), Positives = 94/145 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+S+ P+ LQLGGSDP LA A ++ +GY E+NLNCGCPS V G FGA LM+ P++
Sbjct: 72 RSEQPLALQLGGSDPALLAQAARIAAEWGYDEVNLNCGCPSDRVQA-GRFGACLMREPAL 130
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M A D +P+TVKCRLGVD D+ Y+ FVD AAG VHAR A L
Sbjct: 131 VAECVAAMVNAVD--IPVTVKCRLGVDEDNDYDVFAAFVDRQVAAGAAM-VVVHARNAWL 187
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPL+Y + YRL E
Sbjct: 188 KGLSPKENREVPPLKYDWAYRLKQE 212
[70][TOP]
>UniRef100_B7VI79 tRNA-dihydrouridine synthase A n=2 Tax=Vibrio RepID=B7VI79_VIBSL
Length = 333
Score = 144 bits (364), Expect = 3e-33
Identities = 74/142 (52%), Positives = 92/142 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HP+ LQLGGS+P +LAA L+ GY E+NLN GCPS V G FGA LM P +
Sbjct: 62 EQEHPLALQLGGSNPVDLAACAKLAGERGYDEVNLNVGCPSDRVQN-GRFGACLMAEPEL 120
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M E D +PITVK R+G+D DSYE L +FV TVS GG F++HAR A L
Sbjct: 121 VADCVSAMKEVTD--IPITVKTRIGIDDQDSYEFLTKFVSTVSEKGGCEQFTIHARKAWL 178
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y++
Sbjct: 179 SGLSPKENREIPPLDYDRAYQI 200
[71][TOP]
>UniRef100_UPI0001972221 hypothetical protein NEILACOT_00947 n=1 Tax=Neisseria lactamica
ATCC 23970 RepID=UPI0001972221
Length = 336
Score = 144 bits (363), Expect = 4e-33
Identities = 74/145 (51%), Positives = 93/145 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ + PV LQLGGSDP +LA A + YGY E+NLNCGCPSP V KG+FGA LM +
Sbjct: 62 EGEQPVALQLGGSDPSDLAKAAKAAEAYGYNEVNLNCGCPSPRVQ-KGSFGACLMNEVGL 120
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M EA +P+TVK R+GVD Y+++ FV T+ + F VHAR A L
Sbjct: 121 VADCLNAMQEAV--GIPVTVKHRIGVDRQTEYQTVADFVGTLRDKTACKTFIVHARNAWL 178
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPL+Y YVYRL E
Sbjct: 179 DGLSPKENRDVPPLKYDYVYRLKQE 203
[72][TOP]
>UniRef100_UPI00016AE028 tRNA-dihydrouridine synthase A n=1 Tax=Burkholderia thailandensis
MSMB43 RepID=UPI00016AE028
Length = 339
Score = 144 bits (363), Expect = 4e-33
Identities = 79/138 (57%), Positives = 95/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P +LA A L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 65 PVALQLGGSEPADLAHAAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPRLVADC 123
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD+ D Y + FV TV+AA G F VHAR AIL GLS
Sbjct: 124 VKAMRDAV--SIPVTVKHRIGVDSVDDYAFVRDFVGTVAAA-GCEVFVVHARNAILKGLS 180
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y YRL
Sbjct: 181 PKENREIPPLKYDYAYRL 198
[73][TOP]
>UniRef100_Q1GI19 TIM-barrel protein yjbN family n=1 Tax=Ruegeria sp. TM1040
RepID=Q1GI19_SILST
Length = 336
Score = 144 bits (363), Expect = 4e-33
Identities = 79/141 (56%), Positives = 95/141 (67%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
S+HPV LQLGGSDP+ELA A L GY EINLNCGCPS V GAFGA LM+TP +V
Sbjct: 67 SEHPVALQLGGSDPKELAEAARLGAEAGYDEINLNCGCPSDRVQ-SGAFGAVLMQTPELV 125
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ MAEA S+ +TVKCR+GVD E L F+D + AA GV+ ++HAR A L
Sbjct: 126 ADCVAAMAEAV--SVEVTVKCRIGVDDQTPDEILPDFLDKIRAA-GVKRVTIHARKAWLQ 182
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y V+ +
Sbjct: 183 GLSPKENRDIPPLDYELVHAM 203
[74][TOP]
>UniRef100_B2UAF6 TIM-barrel protein, yjbN family n=1 Tax=Ralstonia pickettii 12J
RepID=B2UAF6_RALPJ
Length = 327
Score = 144 bits (363), Expect = 4e-33
Identities = 76/140 (54%), Positives = 97/140 (69%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HPV LQLGGS+P++LA A L +GY EINLNCGCPS V +GAFGA LM P +VA
Sbjct: 47 EHPVALQLGGSEPDDLAQAARLGQQWGYKEINLNCGCPSERVQ-RGAFGACLMAEPKLVA 105
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ M +A S+P+TVK R+G+D ++Y+ + FV T++ A G F VHAR AIL G
Sbjct: 106 QGVTAMRDAV--SIPVTVKHRIGIDAIETYDFVRDFVGTIAEA-GCETFIVHARNAILKG 162
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
LSP +NR IPPLRY VY+L
Sbjct: 163 LSPKENREIPPLRYEVVYQL 182
[75][TOP]
>UniRef100_B2FI91 Putative tRNA-dihydrouridine synthase A n=1 Tax=Stenotrophomonas
maltophilia K279a RepID=B2FI91_STRMK
Length = 334
Score = 144 bits (363), Expect = 4e-33
Identities = 76/145 (52%), Positives = 94/145 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+S+ P+ LQLGGSDP LA A ++ +GY E+NLNCGCPS V G FGA LM+ P +
Sbjct: 63 RSEQPLALQLGGSDPALLAQAARIAAEWGYDEVNLNCGCPSDRVQA-GRFGACLMREPVL 121
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M +A D +P+TVKCRLGVD D+ Y+ FVD AAG VHAR A L
Sbjct: 122 VAECVAAMVDAVD--IPVTVKCRLGVDEDNDYDVFASFVDRQVAAGAAM-VVVHARNAWL 178
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPL+Y + YRL E
Sbjct: 179 KGLSPKENREVPPLKYDWAYRLKQE 203
[76][TOP]
>UniRef100_A9M2P2 Putative uncharacterized protein n=1 Tax=Neisseria meningitidis
053442 RepID=A9M2P2_NEIM0
Length = 336
Score = 144 bits (363), Expect = 4e-33
Identities = 74/145 (51%), Positives = 93/145 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ + PV LQLGGSDP +LA A + YGY E+NLNCGCPSP V KGAFGA LM +
Sbjct: 62 EGEQPVALQLGGSDPSDLAKAAKAAEAYGYNEVNLNCGCPSPRVQ-KGAFGACLMNEVGL 120
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M +A +P+TVK R+GVD Y+++ FV T+ + F VHAR A L
Sbjct: 121 VADCLNAMQDAV--GIPVTVKHRIGVDRQTEYQTVADFVGTLRDKTACKTFIVHARNAWL 178
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPL+Y YVYRL E
Sbjct: 179 DGLSPKENRDVPPLKYDYVYRLKQE 203
[77][TOP]
>UniRef100_A9AJ04 TIM-barrel protein, yjbN family n=2 Tax=Burkholderia multivorans
ATCC 17616 RepID=A9AJ04_BURM1
Length = 357
Score = 144 bits (363), Expect = 4e-33
Identities = 78/144 (54%), Positives = 97/144 (67%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++ PV LQLGGS+P++LA A L +GY EINLNCGCPS V +GAFGA LM P +V
Sbjct: 75 NESPVALQLGGSEPDDLARAAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLV 133
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ + M +A S+P+TVK R+GVD + Y + FV TV+ A G F VHAR AIL
Sbjct: 134 ADCVKAMRDAV--SVPVTVKHRIGVDAVEDYAFVRDFVGTVAEA-GCSTFIVHARNAILK 190
Query: 452 GLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR IPPL+Y Y YRL E
Sbjct: 191 GLSPKENREIPPLKYDYAYRLKRE 214
[78][TOP]
>UniRef100_A1ITW7 Putative uncharacterized protein n=1 Tax=Neisseria meningitidis
serogroup A RepID=A1ITW7_NEIMA
Length = 336
Score = 144 bits (363), Expect = 4e-33
Identities = 74/145 (51%), Positives = 93/145 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ + PV LQLGGSDP +LA A + YGY E+NLNCGCPSP V KGAFGA LM +
Sbjct: 62 EGEQPVALQLGGSDPSDLAKAAKAAEEYGYNEVNLNCGCPSPRVQ-KGAFGACLMNEVGL 120
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M +A +P+TVK R+GVD Y+++ FV T+ + F VHAR A L
Sbjct: 121 VADCLNAMQDAV--GIPVTVKHRIGVDRQTEYQTVADFVGTLRDKTACKTFIVHARNAWL 178
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPL+Y YVYRL E
Sbjct: 179 DGLSPKENRDVPPLKYDYVYRLKQE 203
[79][TOP]
>UniRef100_C9P2W5 tRNA-dihydrouridine synthase n=1 Tax=Vibrio metschnikovii CIP 69.14
RepID=C9P2W5_VIBME
Length = 335
Score = 144 bits (363), Expect = 4e-33
Identities = 76/142 (53%), Positives = 90/142 (63%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HPV LQLGGS+P +LA L+ GY EINLN GCPS V G FGA LM P +
Sbjct: 63 QEEHPVSLQLGGSNPTDLAHCAKLAQDRGYDEINLNVGCPSDRVQN-GKFGACLMAEPQL 121
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M E D +P+TVK R+G+D DSYE L RFV VS GG F++HAR A L
Sbjct: 122 VADCVAAMREVVD--IPVTVKTRIGIDDQDSYEFLTRFVQLVSEQGGCEQFTIHARKAWL 179
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y+L
Sbjct: 180 SGLSPKENREIPPLDYPRAYQL 201
[80][TOP]
>UniRef100_C6SGX1 tRNA-dihydrouridine synthase A n=1 Tax=Neisseria meningitidis
alpha275 RepID=C6SGX1_NEIME
Length = 336
Score = 144 bits (363), Expect = 4e-33
Identities = 74/145 (51%), Positives = 93/145 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ + PV LQLGGSDP +LA A + YGY E+NLNCGCPSP V KGAFGA LM +
Sbjct: 62 EGEQPVALQLGGSDPSDLAKAAKAAEEYGYNEVNLNCGCPSPRVQ-KGAFGACLMNEVGL 120
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M +A +P+TVK R+GVD Y+++ FV T+ + F VHAR A L
Sbjct: 121 VADCLNAMQDAV--KIPVTVKHRIGVDRQTEYQTVADFVGTLRDKTACKTFIVHARNAWL 178
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPL+Y YVYRL E
Sbjct: 179 DGLSPKENRDVPPLKYDYVYRLKQE 203
[81][TOP]
>UniRef100_C6SBT0 tRNA-dihydrouridine synthase A n=1 Tax=Neisseria meningitidis
alpha153 RepID=C6SBT0_NEIME
Length = 336
Score = 144 bits (363), Expect = 4e-33
Identities = 74/145 (51%), Positives = 93/145 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ + PV LQLGGSDP +LA A + YGY E+NLNCGCPSP V KGAFGA LM +
Sbjct: 62 EGEQPVALQLGGSDPSDLAKAAKAAEEYGYNEVNLNCGCPSPRVQ-KGAFGACLMNEVGL 120
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M +A +P+TVK R+GVD Y+++ FV T+ + F VHAR A L
Sbjct: 121 VADCLNAMQDAV--GIPVTVKHRIGVDRQTEYQTVADFVGTLRDKTACKTFIVHARNAWL 178
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPL+Y YVYRL E
Sbjct: 179 DGLSPKENRDVPPLKYDYVYRLKQE 203
[82][TOP]
>UniRef100_B8LA18 tRNA-dihydrouridine synthase A n=1 Tax=Stenotrophomonas sp. SKA14
RepID=B8LA18_9GAMM
Length = 334
Score = 144 bits (363), Expect = 4e-33
Identities = 76/145 (52%), Positives = 94/145 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+S+ P+ LQLGGSDP LA A ++ +GY E+NLNCGCPS V G FGA LM+ P +
Sbjct: 63 RSEQPLALQLGGSDPALLAQAARIAAEWGYDEVNLNCGCPSDRVQA-GRFGACLMREPVL 121
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M +A D +P+TVKCRLGVD D+ Y+ FVD AAG VHAR A L
Sbjct: 122 VAECVAAMVDAVD--IPVTVKCRLGVDEDNDYDVFAAFVDRQVAAGAAM-VVVHARNAWL 178
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPL+Y + YRL E
Sbjct: 179 KGLSPKENREVPPLKYDWAYRLKQE 203
[83][TOP]
>UniRef100_B5S1G8 Trna-dihydrouridine synthase protein n=1 Tax=Ralstonia solanacearum
RepID=B5S1G8_RALSO
Length = 327
Score = 144 bits (363), Expect = 4e-33
Identities = 75/142 (52%), Positives = 99/142 (69%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+++HPV LQLGGS+P++LA + L +GY EINLNCGCPS V +GAFGA LM P +
Sbjct: 45 ETEHPVALQLGGSEPDDLAQSARLGERWGYREINLNCGCPSERVQ-RGAFGACLMAEPKL 103
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ R M +A S+P+TVK R+G+D ++Y+ + FV T++ A G F VHAR AIL
Sbjct: 104 VADCVRAMRDAV--SIPVTVKHRIGIDAIETYDFVRDFVGTIAEA-GCETFIVHARNAIL 160
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPLRY Y+L
Sbjct: 161 KGLSPKENREIPPLRYEVAYQL 182
[84][TOP]
>UniRef100_A3S043 NIFR3-like protein n=2 Tax=Ralstonia solanacearum
RepID=A3S043_RALSO
Length = 344
Score = 144 bits (363), Expect = 4e-33
Identities = 75/142 (52%), Positives = 99/142 (69%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+++HPV LQLGGS+P++LA + L +GY EINLNCGCPS V +GAFGA LM P +
Sbjct: 62 ETEHPVALQLGGSEPDDLAQSARLGERWGYREINLNCGCPSERVQ-RGAFGACLMAEPKL 120
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ R M +A S+P+TVK R+G+D ++Y+ + FV T++ A G F VHAR AIL
Sbjct: 121 VADCVRAMRDAV--SIPVTVKHRIGIDAIETYDFVRDFVGTIAEA-GCETFIVHARNAIL 177
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPLRY Y+L
Sbjct: 178 KGLSPKENREIPPLRYEVAYQL 199
[85][TOP]
>UniRef100_Q8CWK7 tRNA-dihydrouridine synthase A n=2 Tax=Vibrio vulnificus
RepID=DUSA_VIBVU
Length = 326
Score = 144 bits (363), Expect = 4e-33
Identities = 74/142 (52%), Positives = 90/142 (63%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HPV LQLGGS+P++LA L+ GY E+NLN GCPS V G FGA LM P +
Sbjct: 55 QEEHPVALQLGGSNPQDLATCAKLAAERGYDEVNLNVGCPSDRVQN-GRFGACLMAEPQL 113
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M E D +P+TVK R+G+D DSYE L FV VS GG F++HAR A L
Sbjct: 114 VADCVAAMKEVVD--IPVTVKTRIGIDDQDSYEFLTDFVSIVSEKGGCEQFTIHARKAWL 171
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y+L
Sbjct: 172 SGLSPKENREIPPLDYPRAYQL 193
[86][TOP]
>UniRef100_UPI0001AF43AE tRNA-dihydrouridine synthase A n=1 Tax=Neisseria gonorrhoeae FA19
RepID=UPI0001AF43AE
Length = 348
Score = 144 bits (362), Expect = 5e-33
Identities = 74/145 (51%), Positives = 93/145 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ + PV LQLGGSDP +LA A + YGY E+NLNCGCPSP V KGAFGA LM +
Sbjct: 74 EGEQPVALQLGGSDPSDLAKAAKAAEEYGYNEVNLNCGCPSPRVQ-KGAFGACLMNEVGL 132
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M +A +P+TVK R+GVD Y+++ FV T+ + F VHAR A L
Sbjct: 133 VADCLNAMHDAV--GIPVTVKHRIGVDRQTEYQTVADFVGTLRDKTACKTFIVHARNAWL 190
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPL+Y YVYRL E
Sbjct: 191 DGLSPKENRDVPPLKYDYVYRLKQE 215
[87][TOP]
>UniRef100_UPI0001A4518A hypothetical protein NEISUBOT_02276 n=1 Tax=Neisseria subflava
NJ9703 RepID=UPI0001A4518A
Length = 317
Score = 144 bits (362), Expect = 5e-33
Identities = 74/142 (52%), Positives = 92/142 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ + PV LQLGGSDP +LA A + YGY E+NLNCGCPSP V KGAFGA LM +
Sbjct: 45 EGEQPVALQLGGSDPHDLAIATKAAEAYGYNEVNLNCGCPSPRVQ-KGAFGACLMNDVDL 103
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M +A + +P+TVK R+GVD Y+ + FV T+ R F VHAR A L
Sbjct: 104 VADCLNAMQDAVE--IPVTVKHRIGVDRQTEYQVVADFVGTLREKTACRTFIVHARNAWL 161
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR +PPL+Y YVYRL
Sbjct: 162 DGLSPKENREVPPLKYEYVYRL 183
[88][TOP]
>UniRef100_Q2RTX4 Dihydrouridine synthase TIM-barrel protein yjbN n=1
Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RTX4_RHORT
Length = 349
Score = 144 bits (362), Expect = 5e-33
Identities = 77/143 (53%), Positives = 98/143 (68%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+ LQLGGSDP LA A L+ P+G+ EINLN GCPS V+ G FGA LM P++VA
Sbjct: 72 EHPLALQLGGSDPRALAEATRLAAPFGFAEINLNVGCPSDRVS-SGRFGACLMADPALVA 130
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E MAEA+ + P+T+K R+G+D DSY+ L+ FVD V A G+ VHAR A L G
Sbjct: 131 ECLSAMAEAS--NAPVTIKHRIGIDDLDSYDQLVGFVDQV-ARSGIATIIVHARKAWLKG 187
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR IPPLR+ V+RL A+
Sbjct: 188 LSPKENREIPPLRHDVVHRLKAD 210
[89][TOP]
>UniRef100_C1HZB1 tRNA-dihydrouridine synthase A n=3 Tax=Neisseria gonorrhoeae
RepID=C1HZB1_NEIGO
Length = 338
Score = 144 bits (362), Expect = 5e-33
Identities = 74/145 (51%), Positives = 93/145 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ + PV LQLGGSDP +LA A + YGY E+NLNCGCPSP V KGAFGA LM +
Sbjct: 64 EGEQPVALQLGGSDPSDLAKAAKAAEEYGYNEVNLNCGCPSPRVQ-KGAFGACLMNEVGL 122
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M +A +P+TVK R+GVD Y+++ FV T+ + F VHAR A L
Sbjct: 123 VADCLNAMHDAV--GIPVTVKHRIGVDRQTEYQTVADFVGTLRDKTACKTFIVHARNAWL 180
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPL+Y YVYRL E
Sbjct: 181 DGLSPKENRDVPPLKYDYVYRLKQE 205
[90][TOP]
>UniRef100_A9IT61 Putative dihydrouridine synthase n=1 Tax=Bordetella petrii DSM
12804 RepID=A9IT61_BORPD
Length = 358
Score = 144 bits (362), Expect = 5e-33
Identities = 77/144 (53%), Positives = 97/144 (67%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++HPV LQLGGS+P+ LA A L +GY EINLNCGCPS V +GAFGA LM P++V
Sbjct: 79 AEHPVALQLGGSEPDALAHAARLGRQWGYDEINLNCGCPSERVQ-RGAFGACLMAEPALV 137
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ + M +A D LP+T+K RLG+D D+SY + FV + A G R F VHAR A+L
Sbjct: 138 ADCMKAMQDAVD--LPVTIKHRLGLDYDESYSFVRDFVGAIHAT-GCRVFIVHARNAVLK 194
Query: 452 GLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP NR IPPLRY +L A+
Sbjct: 195 GLSPKDNREIPPLRYDVARQLKAD 218
[91][TOP]
>UniRef100_A8H8J6 TIM-barrel protein, yjbN family n=1 Tax=Shewanella pealeana ATCC
700345 RepID=A8H8J6_SHEPA
Length = 328
Score = 144 bits (362), Expect = 5e-33
Identities = 77/142 (54%), Positives = 93/142 (65%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HP+ LQLGGS+P +LAA L+ GY EINLN GCPS V G FGA LM P +
Sbjct: 58 QEEHPLALQLGGSNPVDLAACAKLAAERGYDEINLNVGCPSDRVQ-NGRFGACLMAEPEL 116
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M + D +P+TVK R+G+D DSYE L +F+DTV AA G F +HAR A L
Sbjct: 117 VAECVTAMKQVVD--IPVTVKTRIGIDEQDSYEFLTQFIDTVKAA-GCEEFIIHARKAWL 173
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 174 QGLSPKENREIPPLDYERVYQL 195
[92][TOP]
>UniRef100_C7R8Z1 TIM-barrel protein, yjbN family n=1 Tax=Kangiella koreensis DSM
16069 RepID=C7R8Z1_KANKD
Length = 330
Score = 144 bits (362), Expect = 5e-33
Identities = 76/142 (53%), Positives = 94/142 (66%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HPV +QLGGSDP++LA + +GY EINLN GCPS V G FGA LM P +
Sbjct: 58 QEEHPVAVQLGGSDPKDLAHCAKICEDFGYDEINLNVGCPSDRVQ-NGRFGACLMAEPEL 116
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE MA D +P+TVK R+G+D DSYE L F++TV +A GV+ F +HAR A L
Sbjct: 117 VAECMSAMANVVD--VPVTVKSRIGIDELDSYEHLHHFINTVQSA-GVKTFIIHARKAWL 173
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP QNR IPPLRY Y++
Sbjct: 174 SGLSPKQNREIPPLRYDIAYQV 195
[93][TOP]
>UniRef100_C5SEX5 TIM-barrel protein, yjbN family n=1 Tax=Asticcacaulis excentricus
CB 48 RepID=C5SEX5_9CAUL
Length = 330
Score = 144 bits (362), Expect = 5e-33
Identities = 76/140 (54%), Positives = 93/140 (66%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HPV LQLGGS+P+ELAA ++ +GY E+NLNCGCPS V G+FGA LM+ P +VA
Sbjct: 47 EHPVALQLGGSEPDELAACAKIAEDWGYDEVNLNCGCPSDRVQ-SGSFGACLMREPQLVA 105
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ + M EA LP+TVKCR+GVD D +L V+ A GVR F VHAR A L G
Sbjct: 106 DCMQAMGEAT--RLPVTVKCRIGVDDQDEETALFALVEACRQA-GVRTFIVHARKAWLKG 162
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
LSP +NR IPPL Y VY L
Sbjct: 163 LSPKENRDIPPLNYELVYAL 182
[94][TOP]
>UniRef100_C0DYL1 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC
23834 RepID=C0DYL1_EIKCO
Length = 317
Score = 144 bits (362), Expect = 5e-33
Identities = 75/142 (52%), Positives = 96/142 (67%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+S++PV LQLGGS+P +LA A A++ +GY EINLNCGCPSP V KGAFGA LM +
Sbjct: 45 ESENPVALQLGGSNPADLAKAAAIAAGWGYDEINLNCGCPSPRVQ-KGAFGACLMNEVDL 103
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M EAA +TVK R+G+D Y+++ FV T+S R + VHAR A L
Sbjct: 104 VADCLNAMQEAAP-DCAVTVKHRIGIDRQTEYQTVCDFVGTLSDKTACRTYIVHARNAWL 162
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR +PPL+Y YVYRL
Sbjct: 163 EGLSPKENRDVPPLKYDYVYRL 184
[95][TOP]
>UniRef100_B5UAD0 tRNA dihydrouridine synthase (Fragment) n=1 Tax=Vibrio
parahaemolyticus RepID=B5UAD0_VIBPA
Length = 211
Score = 144 bits (362), Expect = 5e-33
Identities = 75/142 (52%), Positives = 90/142 (63%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HP+ LQLGGS+PE+LA L+ GY EINLN GCPS V G FGA LM P +
Sbjct: 55 EEEHPLALQLGGSNPEDLATCAKLAQERGYDEINLNVGCPSDRVQN-GRFGACLMAEPQL 113
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M E D +P+TVK R+G+D DSYE L FV VS GG F++HAR A L
Sbjct: 114 VAECVAAMKEVVD--VPVTVKTRIGIDDQDSYEFLTDFVSIVSEKGGCEQFTIHARKAWL 171
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y+L
Sbjct: 172 SGLSPKENREIPPLDYPRAYQL 193
[96][TOP]
>UniRef100_B1XI00 Dihydrouridine synthase A n=1 Tax=Synechococcus sp. PCC 7002
RepID=B1XI00_SYNP2
Length = 344
Score = 143 bits (361), Expect = 6e-33
Identities = 77/141 (54%), Positives = 96/141 (68%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++HP+ LQLGG +P+ELA + +GY EINLN GCPSP V +G FGA LM P +V
Sbjct: 64 AEHPISLQLGGDNPKELAECAKVGEDWGYDEINLNVGCPSPRVQ-QGNFGACLMTQPELV 122
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ M A ++P+TVK R+GVD DSY L RF++ VSA G R FSVHAR A L
Sbjct: 123 ADCVAAMQGAV--NIPVTVKHRIGVDEQDSYADLCRFIEIVSATGCDR-FSVHARKAWLQ 179
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR++PPLRY VYRL
Sbjct: 180 GLSPKENRTVPPLRYADVYRL 200
[97][TOP]
>UniRef100_A9BZZ3 TIM-barrel protein, yjbN family n=1 Tax=Delftia acidovorans SPH-1
RepID=A9BZZ3_DELAS
Length = 336
Score = 143 bits (361), Expect = 6e-33
Identities = 78/140 (55%), Positives = 95/140 (67%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HPV LQLGGS+P +LA A L +GY EINLNCGCPS V +GAFGA LM +VA
Sbjct: 66 EHPVALQLGGSEPSDLAQAARLGAQWGYDEINLNCGCPSERVQ-RGAFGACLMNEAPLVA 124
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ + M + D +P+TVK R+G+D D+SYE + FV TV+ A G R F VHAR A L G
Sbjct: 125 DCVKAMVDVVD--VPVTVKHRIGIDKDESYEFVRDFVGTVADA-GCRVFIVHARNAWLKG 181
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
LSP +NR IPPLRY V RL
Sbjct: 182 LSPKENREIPPLRYEIVARL 201
[98][TOP]
>UniRef100_A2SH35 tRNA-dihydrouridine synthase A n=1 Tax=Methylibium petroleiphilum
PM1 RepID=A2SH35_METPP
Length = 352
Score = 143 bits (361), Expect = 6e-33
Identities = 76/140 (54%), Positives = 97/140 (69%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HPV LQLGGS+PE+LAA L +GY EINLNCGCPS V +GAFGA LM P +VA
Sbjct: 81 EHPVALQLGGSEPEDLAACAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMAEPDLVA 139
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ + M +A +P+TVK R+G+D +SY + F+ TV+AA G F VHAR A L G
Sbjct: 140 DGVKAMRDAV--GIPVTVKHRIGIDRTESYGFVRDFIGTVAAA-GCEVFIVHARNAWLKG 196
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
LSP +NR +PPLR+ +VYRL
Sbjct: 197 LSPKENRELPPLRHEWVYRL 216
[99][TOP]
>UniRef100_C5TIS6 tRNA-dihydrouridine synthase A n=1 Tax=Neisseria flavescens SK114
RepID=C5TIS6_NEIFL
Length = 334
Score = 143 bits (361), Expect = 6e-33
Identities = 74/145 (51%), Positives = 92/145 (63%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ + PV LQLGGSDP +LA A + YGY E+NLNCGCPSP V KGAFGA LM +
Sbjct: 60 EGEQPVALQLGGSDPHDLAIAAKAAETYGYNEVNLNCGCPSPRVQ-KGAFGACLMNDVDL 118
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M + + +P+TVK R+GVD Y+ + FV T+ R F VHAR A L
Sbjct: 119 VADCLNAMQDVVE--IPVTVKHRIGVDRQTEYQVVADFVGTLREKTACRTFIVHARNAWL 176
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPL+Y YVYRL E
Sbjct: 177 DGLSPKENREVPPLKYEYVYRLKQE 201
[100][TOP]
>UniRef100_Q9RTQ8 Putative uncharacterized protein n=1 Tax=Deinococcus radiodurans
RepID=Q9RTQ8_DEIRA
Length = 333
Score = 143 bits (360), Expect = 8e-33
Identities = 80/143 (55%), Positives = 94/143 (65%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+ LQLGGSD LA L+ +GY E+NLNCGCPS V+ G+FGA LM TP VVA
Sbjct: 62 EHPLALQLGGSDAAALAECARLAEDWGYDEVNLNCGCPSDRVS-SGSFGACLMGTPDVVA 120
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
A M A LP+TVK R+G+D DSYE L FV TV+AA G F VHAR A L G
Sbjct: 121 RAVEAMRAAT--RLPVTVKHRIGIDDLDSYEHLTGFVRTVAAA-GCEQFIVHARKAWLSG 177
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR IPPLRY V +L A+
Sbjct: 178 LSPKENREIPPLRYEVVQQLKAD 200
[101][TOP]
>UniRef100_Q9K142 Putative uncharacterized protein n=1 Tax=Neisseria meningitidis
serogroup B RepID=Q9K142_NEIMB
Length = 336
Score = 143 bits (360), Expect = 8e-33
Identities = 73/145 (50%), Positives = 93/145 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ + PV LQLGGSDP +LA A + YGY E+NLNCGCPSP V KG+FGA LM +
Sbjct: 62 EGEQPVALQLGGSDPSDLAKAAKAAEAYGYNEVNLNCGCPSPRVQ-KGSFGACLMNEVGL 120
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M +A +P+TVK R+GVD Y+++ FV T+ + F VHAR A L
Sbjct: 121 VADCLNAMQDAV--KIPVTVKHRIGVDRQTEYQTVADFVGTLRDKTACKTFIVHARNAWL 178
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPL+Y YVYRL E
Sbjct: 179 DGLSPKENRDVPPLKYDYVYRLKQE 203
[102][TOP]
>UniRef100_Q8F0E1 Putative uncharacterized protein n=1 Tax=Leptospira interrogans
RepID=Q8F0E1_LEPIN
Length = 332
Score = 143 bits (360), Expect = 8e-33
Identities = 76/141 (53%), Positives = 96/141 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
P+ +QLGGSDP+ LA + + YGYTEINLN GCPS V +G FGA LM+TP VAE
Sbjct: 52 PLAIQLGGSDPKALAESCKIGEDYGYTEINLNVGCPSDRVR-EGNFGACLMETPEKVAEL 110
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
T M + S+PITVKCR+G+ +++E L +F++ V G V+ F VHAR AILGGL+
Sbjct: 111 TFAMDTSV--SIPITVKCRIGIPGKETFEDLCKFIECVRQTG-VQRFIVHARIAILGGLT 167
Query: 461 PAQNRSIPPLRYGYVYRLAAE 523
PAQNR +PPL Y YV L E
Sbjct: 168 PAQNRQVPPLHYTYVESLKKE 188
[103][TOP]
>UniRef100_Q72UL1 Putative uncharacterized protein n=1 Tax=Leptospira interrogans
serovar Copenhageni RepID=Q72UL1_LEPIC
Length = 347
Score = 143 bits (360), Expect = 8e-33
Identities = 76/141 (53%), Positives = 96/141 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
P+ +QLGGSDP+ LA + + YGYTEINLN GCPS V +G FGA LM+TP VAE
Sbjct: 67 PLAIQLGGSDPKALAESCKIGEDYGYTEINLNVGCPSDRVR-EGNFGACLMETPEKVAEL 125
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
T M + S+PITVKCR+G+ +++E L +F++ V G V+ F VHAR AILGGL+
Sbjct: 126 TFAMDTSV--SIPITVKCRIGIPGKETFEDLCKFIECVRQTG-VQRFIVHARIAILGGLT 182
Query: 461 PAQNRSIPPLRYGYVYRLAAE 523
PAQNR +PPL Y YV L E
Sbjct: 183 PAQNRQVPPLHYTYVESLKKE 203
[104][TOP]
>UniRef100_C1D882 Dihydrouridine synthase n=1 Tax=Laribacter hongkongensis HLHK9
RepID=C1D882_LARHH
Length = 339
Score = 143 bits (360), Expect = 8e-33
Identities = 77/145 (53%), Positives = 99/145 (68%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+++HP+ LQLGGS+P ELA L+ +GY E+NLN GCPS V KGAFGA LMK P +
Sbjct: 70 ETEHPIALQLGGSEPAELAQCARLAESWGYDEVNLNVGCPSERVQ-KGAFGACLMKEPGL 128
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ R M + +LP+TVK R+GVD +++ + FV V+AA G F VHAR AIL
Sbjct: 129 VADCVRAMRDVT--TLPVTVKHRIGVDDVEAFGFVSDFVGEVAAA-GCSTFIVHARNAIL 185
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR IPPL+Y Y +RL AE
Sbjct: 186 KGLSPKENREIPPLKYDYAWRLKAE 210
[105][TOP]
>UniRef100_A4WPB3 TIM-barrel protein, yjbN family n=1 Tax=Rhodobacter sphaeroides
ATCC 17025 RepID=A4WPB3_RHOS5
Length = 335
Score = 143 bits (360), Expect = 8e-33
Identities = 76/138 (55%), Positives = 97/138 (70%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++HPV LQLGGSDP ELA AV ++ P+G+ EINLN GCPS V G FGA LM+ P+++
Sbjct: 68 AEHPVALQLGGSDPAELAQAVRVAAPHGHDEINLNVGCPSDRVQ-SGCFGAVLMERPALL 126
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ M A+ +P+TVKCR+GVD + E L F++TV+AA GVRHF +HAR A L
Sbjct: 127 ADCVAAM--IAESPVPVTVKCRIGVDEQEPAEILPAFLETVAAA-GVRHFVIHARKAWLQ 183
Query: 452 GLSPAQNRSIPPLRYGYV 505
GLSP +NR IPPL Y V
Sbjct: 184 GLSPRENREIPPLDYPLV 201
[106][TOP]
>UniRef100_A1KVT6 Putative uncharacterized protein n=1 Tax=Neisseria meningitidis
FAM18 RepID=A1KVT6_NEIMF
Length = 336
Score = 143 bits (360), Expect = 8e-33
Identities = 73/145 (50%), Positives = 93/145 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ + PV LQLGGSDP +LA A + YGY E+NLNCGCPSP V KG+FGA LM +
Sbjct: 62 EGEQPVALQLGGSDPSDLAKAAKAAEAYGYNEVNLNCGCPSPRVQ-KGSFGACLMNEVGL 120
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M +A +P+TVK R+GVD Y+++ FV T+ + F VHAR A L
Sbjct: 121 VADCLNAMQDAV--GIPVTVKHRIGVDRQTEYQTVADFVGTLRDKTACKTFIVHARNAWL 178
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPL+Y YVYRL E
Sbjct: 179 DGLSPKENRDVPPLKYDYVYRLKQE 203
[107][TOP]
>UniRef100_C9X2X8 tRNA-dihydrouridine synthase A n=1 Tax=Neisseria meningitidis 8013
RepID=C9X2X8_NEIME
Length = 336
Score = 143 bits (360), Expect = 8e-33
Identities = 73/145 (50%), Positives = 93/145 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ + PV LQLGGSDP +LA A + YGY E+NLNCGCPSP V KG+FGA LM +
Sbjct: 62 EGEQPVALQLGGSDPSDLAKAAKAAEAYGYNEVNLNCGCPSPRVQ-KGSFGACLMNEVGL 120
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M +A +P+TVK R+GVD Y+++ FV T+ + F VHAR A L
Sbjct: 121 VADCLNAMQDAV--GIPVTVKHRIGVDRQTEYQTVADFVGTLRDKTACKTFIVHARNAWL 178
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPL+Y YVYRL E
Sbjct: 179 DGLSPKENRDVPPLKYDYVYRLKQE 203
[108][TOP]
>UniRef100_C6S8V8 tRNA-dihydrouridine synthase A n=1 Tax=Neisseria meningitidis
RepID=C6S8V8_NEIME
Length = 336
Score = 143 bits (360), Expect = 8e-33
Identities = 73/145 (50%), Positives = 93/145 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ + PV LQLGGSDP +LA A + YGY E+NLNCGCPSP V KG+FGA LM +
Sbjct: 62 EGEQPVALQLGGSDPSDLAKAAKAAEAYGYNEVNLNCGCPSPRVQ-KGSFGACLMNEVGL 120
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M +A +P+TVK R+GVD Y+++ FV T+ + F VHAR A L
Sbjct: 121 VADCLNAMQDAV--GIPVTVKHRIGVDRQTEYQTVADFVGTLRDKTACKTFIVHARNAWL 178
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPL+Y YVYRL E
Sbjct: 179 DGLSPKENRDVPPLKYDYVYRLKQE 203
[109][TOP]
>UniRef100_C1XXH3 tRNA dihydrouridine synthase A n=1 Tax=Meiothermus silvanus DSM
9946 RepID=C1XXH3_9DEIN
Length = 345
Score = 143 bits (360), Expect = 8e-33
Identities = 82/141 (58%), Positives = 93/141 (65%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
S+HPV LQLGGSDP LA A + +GY EINLN GCPS V G G FGA LMK P +V
Sbjct: 60 SEHPVALQLGGSDPALLAEAARIGQDWGYDEINLNLGCPSERVQG-GGFGACLMKEPDLV 118
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
AE M EA LP+T K RLGVD + Y L RFV+ + A+ GV F VHAR A L
Sbjct: 119 AECFAAMREAV--QLPVTAKHRLGVDDLEDYGYLARFVEKL-ASVGVEVFIVHARKAWLQ 175
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IP LRYG+VYRL
Sbjct: 176 GLSPKENREIPELRYGWVYRL 196
[110][TOP]
>UniRef100_B9NPA8 tRNA-dihydrouridine synthase A n=1 Tax=Rhodobacteraceae bacterium
KLH11 RepID=B9NPA8_9RHOB
Length = 320
Score = 143 bits (360), Expect = 8e-33
Identities = 76/142 (53%), Positives = 95/142 (66%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HPV LQLGGSDP+ELA A L GY EINLNCGCPS V G FGA LM+ P+ VA
Sbjct: 47 EHPVALQLGGSDPDELAKAARLGAEAGYDEINLNCGCPSDRVQ-SGTFGAVLMREPTRVA 105
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ R M EA D + +TVKCR+GVD + + L F++ +SAA G + ++HAR A L G
Sbjct: 106 DCVRAMQEAVD--VEVTVKCRIGVDEQEPHAVLPAFLEQISAA-GCQRVTIHARKAWLQG 162
Query: 455 LSPAQNRSIPPLRYGYVYRLAA 520
LSP +NR IPPL Y V+R+ A
Sbjct: 163 LSPKENRDIPPLDYALVHRMKA 184
[111][TOP]
>UniRef100_UPI0001BBAF60 tRNA-dihydrouridine synthase A n=1 Tax=Acinetobacter radioresistens
SH164 RepID=UPI0001BBAF60
Length = 335
Score = 142 bits (359), Expect = 1e-32
Identities = 76/145 (52%), Positives = 95/145 (65%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HPVVLQLGGS P++LA ++ +GY E+NLN GCPS V GA LM P +
Sbjct: 60 QEEHPVVLQLGGSSPKDLATCTKMAEDWGYNEVNLNVGCPSDRVQ-NNKIGACLMAEPEL 118
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M +A ++P+TVK R+G+D SYE +L FVDTV A G +F VHAR A+L
Sbjct: 119 VAECISAMRQAV--NIPVTVKHRIGIDDMQSYEEMLHFVDTV-AKTGCNNFIVHARIALL 175
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPLRY VYRL E
Sbjct: 176 QGLSPKENREVPPLRYEDVYRLKQE 200
[112][TOP]
>UniRef100_UPI000196E371 hypothetical protein NEICINOT_00808 n=1 Tax=Neisseria cinerea ATCC
14685 RepID=UPI000196E371
Length = 319
Score = 142 bits (359), Expect = 1e-32
Identities = 73/145 (50%), Positives = 93/145 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ + PV LQLGGSDP +LA A + YGY E+NLNCGCPSP V KG+FGA LM +
Sbjct: 45 EGEQPVALQLGGSDPSDLAKAAKAAEAYGYNEVNLNCGCPSPRVQ-KGSFGACLMNEVML 103
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M +A +P+TVK R+GVD Y+++ FV T+ + F VHAR A L
Sbjct: 104 VADCLNAMQDAV--GIPVTVKHRIGVDRQTEYQTVADFVGTLRDKTACKTFIVHARNAWL 161
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPL+Y YVYRL E
Sbjct: 162 DGLSPKENRDVPPLKYDYVYRLKQE 186
[113][TOP]
>UniRef100_Q8XZU6 Putative trna-dihydrouridine synthase protein n=1 Tax=Ralstonia
solanacearum RepID=Q8XZU6_RALSO
Length = 344
Score = 142 bits (359), Expect = 1e-32
Identities = 74/142 (52%), Positives = 99/142 (69%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+++HPV LQLGGS+P++LA + L +GY EINLNCGCPS V +GAFGA LM P +
Sbjct: 62 EAEHPVALQLGGSEPDDLAQSARLGERWGYREINLNCGCPSERVQ-RGAFGACLMAEPKL 120
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ + M +A S+P+TVK R+G+D ++Y+ + FV ++ A G F VHAR AIL
Sbjct: 121 VADGVKAMRDAV--SIPVTVKHRIGIDAIETYDFVRDFVGAIAEA-GCETFIVHARNAIL 177
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPLRY VY+L
Sbjct: 178 KGLSPKENREIPPLRYEVVYQL 199
[114][TOP]
>UniRef100_A4JE36 TIM-barrel protein, yjbN family n=1 Tax=Burkholderia vietnamiensis
G4 RepID=A4JE36_BURVG
Length = 344
Score = 142 bits (359), Expect = 1e-32
Identities = 77/141 (54%), Positives = 96/141 (68%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++ PV LQLGGS+P++LA A L +GY EINLNCGCPS V +GAFGA LM P +V
Sbjct: 62 NESPVALQLGGSEPDDLARAAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLV 120
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ + M +A S+P+TVK R+GVD + Y + FV TV+ A G F VHAR AIL
Sbjct: 121 ADCVKAMRDAV--SVPVTVKHRIGVDAVEDYAFVRDFVGTVAQA-GCDTFIVHARNAILK 177
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL+Y Y YRL
Sbjct: 178 GLSPKENREIPPLKYDYAYRL 198
[115][TOP]
>UniRef100_C9Q3B9 tRNA-dihydrouridine synthase n=1 Tax=Vibrio sp. RC341
RepID=C9Q3B9_9VIBR
Length = 335
Score = 142 bits (359), Expect = 1e-32
Identities = 72/142 (50%), Positives = 90/142 (63%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HPV LQ GGS+P++LA L+ GY EINLN GCPS V G FGA LM P +
Sbjct: 63 QEEHPVALQFGGSNPKDLAHCAKLAQERGYDEINLNVGCPSDRVQN-GRFGACLMAEPEL 121
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M D +P+TVK R+G+D DSYE L +F+ TV+ GG F++HAR A L
Sbjct: 122 VAECVAAMRSVVD--IPVTVKTRIGIDDQDSYEFLTQFISTVAEKGGCEQFTIHARKAWL 179
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y++
Sbjct: 180 SGLSPKENREIPPLDYSRAYQI 201
[116][TOP]
>UniRef100_C6RSD4 tRNA-dihydrouridine synthase A n=1 Tax=Acinetobacter radioresistens
SK82 RepID=C6RSD4_ACIRA
Length = 340
Score = 142 bits (359), Expect = 1e-32
Identities = 76/145 (52%), Positives = 95/145 (65%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HPVVLQLGGS P++LA ++ +GY E+NLN GCPS V GA LM P +
Sbjct: 65 QEEHPVVLQLGGSSPKDLATCTKMAEDWGYNEVNLNVGCPSDRVQ-NNKIGACLMAEPEL 123
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M +A ++P+TVK R+G+D SYE +L FVDTV A G +F VHAR A+L
Sbjct: 124 VAECISAMRQAV--NIPVTVKHRIGIDDMQSYEEMLHFVDTV-AKTGCNNFIVHARIALL 180
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPLRY VYRL E
Sbjct: 181 QGLSPKENREVPPLRYEDVYRLKQE 205
[117][TOP]
>UniRef100_B8KXM2 tRNA-dihydrouridine synthase A n=1 Tax=gamma proteobacterium
NOR51-B RepID=B8KXM2_9GAMM
Length = 311
Score = 142 bits (359), Expect = 1e-32
Identities = 75/140 (53%), Positives = 95/140 (67%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+ LQLGGS+PEELA+ ++ +GY E+NLNCGCPS V G FGA LM +V
Sbjct: 46 EHPIALQLGGSNPEELASCARMAEDWGYDEVNLNCGCPSDRVQ-NGRFGACLMAEAELVR 104
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ M +A+ +LP+TVK R+G+D +SY L FV TV A+GG R F VHAR A L G
Sbjct: 105 DCVAAMCDAS--ALPVTVKHRIGIDHQESYNELRDFVGTV-ASGGARVFIVHARKAWLQG 161
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
LSP +NR IPPL Y +VYRL
Sbjct: 162 LSPKENREIPPLNYPWVYRL 181
[118][TOP]
>UniRef100_A6D436 NifR3/Smm1 family protein n=1 Tax=Vibrio shilonii AK1
RepID=A6D436_9VIBR
Length = 315
Score = 142 bits (359), Expect = 1e-32
Identities = 74/142 (52%), Positives = 89/142 (62%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HPV LQLGGS+P +LA L+ GY EINLN GCPS V G FGA LM P +
Sbjct: 44 EEEHPVALQLGGSNPADLATCAKLAAERGYDEINLNVGCPSDRVQN-GRFGACLMAEPEL 102
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M E D +P+TVK R+G+D DSYE L RFV VS G F++HAR A L
Sbjct: 103 VAECVAAMKEVVD--VPVTVKTRIGIDDQDSYEFLTRFVSLVSEKAGCEQFTIHARKAWL 160
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y++
Sbjct: 161 SGLSPKENREIPPLDYPRAYQI 182
[119][TOP]
>UniRef100_B8C9P9 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana
CCMP1335 RepID=B8C9P9_THAPS
Length = 233
Score = 142 bits (359), Expect = 1e-32
Identities = 83/193 (43%), Positives = 109/193 (56%), Gaps = 26/193 (13%)
Frame = +2
Query: 23 IAVGAVASARDGVPPPPSASPPQSQHPV---VLQLGGSDPEELAAAVALSLPYG------ 175
+A A+A R+ S + H + VLQLGGSDPE+L A +
Sbjct: 32 VAANAIAHERNDALLGIEISDTLNTHSLGASVLQLGGSDPEQLFLAAKTLMQQSNYPAIY 91
Query: 176 --YTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEATRRMAEAADYSLPITVKCRLGVD 349
YT +NLNCGCPSP VAGKG FGAALM P +V + T M + ++ ++PITVKCR+G D
Sbjct: 92 CDYTALNLNCGCPSPKVAGKGCFGAALMSEPDLVRQLTTSMHKGSEGTIPITVKCRIGTD 151
Query: 350 --------------TDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG-GLSPAQNRSIP 484
++ Y SL F++TV++ G V F +HAR A+LG SPA NR +P
Sbjct: 152 EGYTFTHKDYLSRSQEEEYSSLKNFIETVASDGIVTDFQIHARIAVLGKSYSPADNRKVP 211
Query: 485 PLRYGYVYRLAAE 523
PLRY +V RLA E
Sbjct: 212 PLRYHHVQRLAQE 224
[120][TOP]
>UniRef100_B7GAU2 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7GAU2_PHATR
Length = 330
Score = 142 bits (359), Expect = 1e-32
Identities = 80/162 (49%), Positives = 97/162 (59%), Gaps = 21/162 (12%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPY------GYTEINLNCGCPSPTVAGKGAFGAALMKTP 262
P VLQLGGSDPE++ A L YT INLNCGCPSP VAGKG FGAALM P
Sbjct: 56 PSVLQLGGSDPEQMFQAAQTVLDMTARGHCDYTAINLNCGCPSPKVAGKGCFGAALMDEP 115
Query: 263 SVVAEATRRMAEAADYSLPITVKCRLGVDTDDS--------------YESLLRFVDTVSA 400
+VAE T+ + E + LP+TVKCR+G D+D + Y L F++TV++
Sbjct: 116 QLVAELTKALHEGTEGRLPVTVKCRIGTDSDQAFTRQAYAAIDPEQEYSKLRSFIETVAS 175
Query: 401 AGGVRHFSVHARAAIL-GGLSPAQNRSIPPLRYGYVYRLAAE 523
G V FSVHAR A+L SP+ NR IPPL+Y V RL E
Sbjct: 176 DGIVTDFSVHARIAVLQKSFSPSDNRKIPPLKYDIVRRLVQE 217
[121][TOP]
>UniRef100_Q607T6 TIM-barrel protein, yjbN family n=1 Tax=Methylococcus capsulatus
RepID=Q607T6_METCA
Length = 360
Score = 142 bits (358), Expect = 1e-32
Identities = 78/144 (54%), Positives = 94/144 (65%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++HP+ +QLGGSDPE LA ++ G+ E+NLN GCPSP V G FGA LM P V
Sbjct: 80 AEHPLAIQLGGSDPEALAECAKIAEFRGFDEVNLNVGCPSPRVQ-TGRFGACLMAEPERV 138
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ R M EA S+P+TVK R+G+D DSYE LL FV T+ A G R F VHAR A L
Sbjct: 139 ADCVRAMCEAV--SVPVTVKTRIGIDDRDSYEDLLHFV-TIVAEAGCRTFIVHARKAWLQ 195
Query: 452 GLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR PPLRY V RL +E
Sbjct: 196 GLSPKENRQTPPLRYDVVRRLKSE 219
[122][TOP]
>UniRef100_B8H4J2 NIFR3-like protein n=2 Tax=Caulobacter vibrioides
RepID=B8H4J2_CAUCN
Length = 341
Score = 142 bits (358), Expect = 1e-32
Identities = 79/143 (55%), Positives = 91/143 (63%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
QHPV +QLGGSDP ELA A ++ YGY E+NLN GCPS V G FGA LM+ P +VA
Sbjct: 63 QHPVAVQLGGSDPAELAQAARIAEDYGYDEVNLNVGCPSDRVQ-SGRFGACLMREPDLVA 121
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E + A +P TVKCR+GVD D ESL VD +AA G+ F VHAR A L G
Sbjct: 122 ECMAAIKNAV--RVPATVKCRIGVDDQDPEESLFTLVDRCAAA-GIDTFVVHARKAWLQG 178
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR IPPL Y VYRL E
Sbjct: 179 LSPKENRDIPPLDYALVYRLKRE 201
[123][TOP]
>UniRef100_B1K0T8 TIM-barrel protein, yjbN family n=1 Tax=Burkholderia cenocepacia
MC0-3 RepID=B1K0T8_BURCC
Length = 328
Score = 142 bits (358), Expect = 1e-32
Identities = 78/141 (55%), Positives = 95/141 (67%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
S+ PV LQLGGS+ ++LA A L +GY EINLNCGCPS V +GAFGA LM P +V
Sbjct: 46 SESPVALQLGGSERDDLARAAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLV 104
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ R M +A S+P+TVK R+GVD + Y + FV TV+ A G F VHAR AIL
Sbjct: 105 ADCVRAMRDAV--SVPVTVKHRIGVDAVEDYAFVRDFVGTVAEA-GCETFVVHARNAILK 161
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL+Y Y YRL
Sbjct: 162 GLSPKENREIPPLKYDYAYRL 182
[124][TOP]
>UniRef100_A1VPW7 TIM-barrel protein, yjbN family n=1 Tax=Polaromonas
naphthalenivorans CJ2 RepID=A1VPW7_POLNA
Length = 337
Score = 142 bits (358), Expect = 1e-32
Identities = 76/143 (53%), Positives = 97/143 (67%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HPV LQLGGS+P +LA L +GY+EIN+NCGCPS V +GAFGA LM P +VA
Sbjct: 70 EHPVALQLGGSEPADLAHCARLGEQWGYSEININCGCPSERVQ-RGAFGACLMAEPKLVA 128
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ + M +A S+P+TVK R+G+D ++ YE + FV TVS A G F VHAR A L G
Sbjct: 129 DCVKAMVDAV--SVPVTVKHRIGIDREERYEFVRDFVGTVSEA-GCDTFIVHARNAWLKG 185
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR +PPLRY V+RL E
Sbjct: 186 LSPKENREVPPLRYELVHRLKKE 208
[125][TOP]
>UniRef100_A0K743 TIM-barrel protein, yjbN family n=2 Tax=Burkholderia cenocepacia
RepID=A0K743_BURCH
Length = 365
Score = 142 bits (358), Expect = 1e-32
Identities = 78/141 (55%), Positives = 95/141 (67%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
S+ PV LQLGGS+ ++LA A L +GY EINLNCGCPS V +GAFGA LM P +V
Sbjct: 83 SESPVALQLGGSERDDLARAAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLV 141
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ R M +A S+P+TVK R+GVD + Y + FV TV+ A G F VHAR AIL
Sbjct: 142 ADCVRAMRDAV--SVPVTVKHRIGVDAVEDYAFVRDFVGTVAEA-GCETFVVHARNAILK 198
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL+Y Y YRL
Sbjct: 199 GLSPKENREIPPLKYDYAYRL 219
[126][TOP]
>UniRef100_C9QCS9 tRNA dihydrouridine synthase A n=1 Tax=Vibrio orientalis CIP 102891
RepID=C9QCS9_VIBOR
Length = 333
Score = 142 bits (358), Expect = 1e-32
Identities = 74/142 (52%), Positives = 90/142 (63%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HPV LQLGGS+P++LA L+ GY EINLN GCPS V G FGA LM P +
Sbjct: 62 QEEHPVALQLGGSNPKDLATCAKLAAERGYDEINLNVGCPSDRVQN-GRFGACLMGEPQL 120
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M + D +P+TVK R+G+D DSYE L FV VS GG F++HAR A L
Sbjct: 121 VADCVAAMRDVVD--VPVTVKTRIGIDDQDSYEFLTDFVSIVSEKGGCEQFTIHARKAWL 178
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y+L
Sbjct: 179 SGLSPKENREIPPLDYPRAYQL 200
[127][TOP]
>UniRef100_B9ZR01 TIM-barrel protein, yjbN family n=1 Tax=Thioalkalivibrio sp. K90mix
RepID=B9ZR01_9GAMM
Length = 313
Score = 142 bits (358), Expect = 1e-32
Identities = 78/144 (54%), Positives = 93/144 (64%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++HP+ LQLGGSDP+ LA A ++ G+ EINLN GCPS V G FGA LM P V
Sbjct: 46 AEHPLALQLGGSDPDTLAQAARIAAERGFDEINLNVGCPSDRVQS-GTFGACLMAQPEQV 104
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A R M +A D +P+TVK R+G+D DS L FV+TV A GG RHF VHAR A L
Sbjct: 105 ARMVRAMQDAVD--VPVTVKHRIGIDEQDSEADLRNFVETV-ARGGCRHFIVHARKAWLQ 161
Query: 452 GLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP NR +PPL Y V+RL AE
Sbjct: 162 GLSPKDNRDVPPLDYERVFRLKAE 185
[128][TOP]
>UniRef100_A6B7F9 tRNA-dihydrouridine synthase A n=1 Tax=Vibrio parahaemolyticus
AQ3810 RepID=A6B7F9_VIBPA
Length = 326
Score = 142 bits (358), Expect = 1e-32
Identities = 74/142 (52%), Positives = 90/142 (63%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HP+ LQLGGS+PE+LA L+ GY EINLN GCPS V G FGA LM P +
Sbjct: 55 EEEHPLALQLGGSNPEDLAKCAKLAQERGYDEINLNVGCPSDRVQN-GRFGACLMAEPQL 113
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M E D +P+TVK R+G+D DSYE L FV VS GG F++HAR A L
Sbjct: 114 VADCVAAMKEVVD--VPVTVKTRIGIDDQDSYEFLTDFVSIVSEKGGCEQFTIHARKAWL 171
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y+L
Sbjct: 172 SGLSPKENREIPPLDYPRAYQL 193
[129][TOP]
>UniRef100_A2VQL7 TRNA-dihydrouridine synthase n=1 Tax=Burkholderia cenocepacia PC184
RepID=A2VQL7_9BURK
Length = 359
Score = 142 bits (358), Expect = 1e-32
Identities = 78/141 (55%), Positives = 95/141 (67%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
S+ PV LQLGGS+ ++LA A L +GY EINLNCGCPS V +GAFGA LM P +V
Sbjct: 77 SESPVALQLGGSERDDLARAAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLV 135
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ R M +A S+P+TVK R+GVD + Y + FV TV+ A G F VHAR AIL
Sbjct: 136 ADCVRAMRDAV--SVPVTVKHRIGVDAVEDYAFVRDFVGTVAEA-GCETFVVHARNAILK 192
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL+Y Y YRL
Sbjct: 193 GLSPKENREIPPLKYDYAYRL 213
[130][TOP]
>UniRef100_Q9LY64 Putative uncharacterized protein MAA21_140 n=1 Tax=Arabidopsis
thaliana RepID=Q9LY64_ARATH
Length = 456
Score = 142 bits (358), Expect = 1e-32
Identities = 88/201 (43%), Positives = 103/201 (51%), Gaps = 52/201 (25%)
Frame = +2
Query: 77 ASPPQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMK 256
A PQ QHP+VLQLGGS+ E LA A LS YGY EINLNCGCPSP VAG G FG +LM
Sbjct: 87 AFSPQ-QHPIVLQLGGSNVENLAKAAKLSDAYGYDEINLNCGCPSPKVAGHGCFGVSLML 145
Query: 257 TPSV------------------------VAEATRRMAEAADYSLPITVKCRLGVDTDDSY 364
P V V EA A AA+ ++P+TVKCR+GVD DSY
Sbjct: 146 KPKVRYFTPPHDFKRYLLFLNFTLSFKLVGEA--MSAIAANTNVPVTVKCRIGVDNHDSY 203
Query: 365 ESLLR----------------------------FVDTVSAAGGVRHFSVHARAAILGGLS 460
+ L F+ VS RHF VH+R A+LGG+S
Sbjct: 204 DELCELFLLSVFLKSRMDLPLRSNTAFPLLLGDFIYKVSTLSPTRHFIVHSRKALLGGIS 263
Query: 461 PAQNRSIPPLRYGYVYRLAAE 523
PA NR IPPL+Y Y Y L +
Sbjct: 264 PADNRRIPPLKYEYYYALVRD 284
[131][TOP]
>UniRef100_C1E9S0 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E9S0_9CHLO
Length = 499
Score = 142 bits (358), Expect = 1e-32
Identities = 81/154 (52%), Positives = 98/154 (63%), Gaps = 13/154 (8%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELA-AAVALSLPYGYTEINLNCGCPSPTVAGKG----AFGAALMKT 259
+HP+ +QLGG+ PE LA AA Y Y EINLNCGCPS V K FGAALM+
Sbjct: 86 EHPLTVQLGGASPERLALAATVCDAEYRYDEINLNCGCPSNRVVNKKDVATCFGAALMRD 145
Query: 260 PSVVAEATRRMAEAADYSLPITVKCRLGV--------DTDDSYESLLRFVDTVSAAGGVR 415
P+ V E RRM EA D +P+TVK RLGV D+ DSY + FVD V+ A GV+
Sbjct: 146 PTHVGECLRRMREAVD--VPVTVKHRLGVRPTEKSPDDSMDSYAFVSEFVDVVNQASGVK 203
Query: 416 HFSVHARAAILGGLSPAQNRSIPPLRYGYVYRLA 517
HF VHARAA+L GLS NR++PPLR+ V+ LA
Sbjct: 204 HFIVHARAAVLSGLSTTGNRTVPPLRHAEVHALA 237
[132][TOP]
>UniRef100_Q87L85 tRNA-dihydrouridine synthase A n=1 Tax=Vibrio parahaemolyticus
RepID=DUSA_VIBPA
Length = 326
Score = 142 bits (358), Expect = 1e-32
Identities = 74/142 (52%), Positives = 90/142 (63%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HP+ LQLGGS+PE+LA L+ GY EINLN GCPS V G FGA LM P +
Sbjct: 55 EEEHPLALQLGGSNPEDLAKCAKLAQERGYDEINLNVGCPSDRVQN-GRFGACLMAEPQL 113
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M E D +P+TVK R+G+D DSYE L FV VS GG F++HAR A L
Sbjct: 114 VADCVAAMKEVVD--VPVTVKTRIGIDDQDSYEFLTDFVSIVSEKGGCEQFTIHARKAWL 171
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y+L
Sbjct: 172 SGLSPKENREIPPLDYPRAYQL 193
[133][TOP]
>UniRef100_UPI000196E9E8 hypothetical protein NEIMUCOT_02922 n=1 Tax=Neisseria mucosa ATCC
25996 RepID=UPI000196E9E8
Length = 334
Score = 142 bits (357), Expect = 2e-32
Identities = 73/145 (50%), Positives = 93/145 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ + PV LQLGGSDP +LA A + YGY E+NLNCGCPSP V KG+FGA LM +
Sbjct: 60 EGEQPVALQLGGSDPSDLAKAAKAAEEYGYNEVNLNCGCPSPRVQ-KGSFGACLMNEVML 118
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M +A +P+TVK R+GVD Y+++ FV T+ + F VHAR A L
Sbjct: 119 VADCLNAMQDAVQ--IPVTVKHRIGVDRQIEYQTVADFVGTLRDKTACKTFIVHARNAWL 176
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPL+Y YVYRL E
Sbjct: 177 DGLSPKENRDVPPLKYDYVYRLKQE 201
[134][TOP]
>UniRef100_C9NZZ1 tRNA dihydrouridine synthase A n=1 Tax=Vibrio coralliilyticus ATCC
BAA-450 RepID=C9NZZ1_9VIBR
Length = 315
Score = 142 bits (357), Expect = 2e-32
Identities = 75/142 (52%), Positives = 90/142 (63%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HPV LQLGGS+P++LA L+ GY EINLN GCPS V G FGA LM P +
Sbjct: 44 QEEHPVALQLGGSNPQDLATCAKLAQERGYDEINLNVGCPSDRVQN-GRFGACLMAEPLL 102
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M + D +P+TVK R+G+D DSYE L FV VS GG F++HAR A L
Sbjct: 103 VAECVAAMRDVVD--VPVTVKTRIGIDDQDSYEFLTDFVSIVSEKGGSDQFTIHARKAWL 160
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y+L
Sbjct: 161 SGLSPKENREIPPLDYPRAYQL 182
[135][TOP]
>UniRef100_C9D3P9 tRNA-dihydrouridine synthase A n=1 Tax=Silicibacter sp. TrichCH4B
RepID=C9D3P9_9RHOB
Length = 336
Score = 142 bits (357), Expect = 2e-32
Identities = 76/143 (53%), Positives = 97/143 (67%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
S+HPV LQLGGSDP+ELA A L GY EINLNCGCPS V GAFGA LM++P +V
Sbjct: 67 SEHPVALQLGGSDPDELAEAAKLGAEAGYDEINLNCGCPSDRVQ-SGAFGAILMQSPELV 125
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ MA+A D + +TVKCR+GVD + + L F++ + AA GV ++HAR A L
Sbjct: 126 ADCMAAMAQAVD--VEVTVKCRIGVDDQNPQDVLPEFLEKIRAA-GVDRVTIHARKAWLK 182
Query: 452 GLSPAQNRSIPPLRYGYVYRLAA 520
GLSP +NR IPPL Y V+++ A
Sbjct: 183 GLSPKENRDIPPLDYELVHQMKA 205
[136][TOP]
>UniRef100_B9BML7 tRNA-dihydrouridine synthase A n=2 Tax=Burkholderia multivorans
RepID=B9BML7_9BURK
Length = 357
Score = 142 bits (357), Expect = 2e-32
Identities = 76/141 (53%), Positives = 96/141 (68%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++ PV LQLGGS+P++LA A L +GY EINLNCGCPS V +GAFGA LM P +V
Sbjct: 75 NESPVALQLGGSEPDDLARAAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLV 133
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ + M +A ++P+TVK R+GVD + Y + FV TV+ A G F VHAR AIL
Sbjct: 134 ADCVKAMRDAV--AVPVTVKHRIGVDAVEDYAFVRDFVGTVAEA-GCSTFIVHARNAILK 190
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL+Y Y YRL
Sbjct: 191 GLSPKENREIPPLKYDYAYRL 211
[137][TOP]
>UniRef100_B9B8T2 tRNA-dihydrouridine synthase A n=1 Tax=Burkholderia multivorans
CGD1 RepID=B9B8T2_9BURK
Length = 357
Score = 142 bits (357), Expect = 2e-32
Identities = 76/141 (53%), Positives = 96/141 (68%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++ PV LQLGGS+P++LA A L +GY EINLNCGCPS V +GAFGA LM P +V
Sbjct: 75 NESPVALQLGGSEPDDLARAAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLV 133
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ + M +A ++P+TVK R+GVD + Y + FV TV+ A G F VHAR AIL
Sbjct: 134 ADCVKAMRDAV--AVPVTVKHRIGVDAVEDYAFVRDFVGTVAEA-GCSTFIVHARNAILK 190
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL+Y Y YRL
Sbjct: 191 GLSPKENREIPPLKYDYAYRL 211
[138][TOP]
>UniRef100_B2PVI8 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC
25827 RepID=B2PVI8_PROST
Length = 336
Score = 142 bits (357), Expect = 2e-32
Identities = 75/142 (52%), Positives = 90/142 (63%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ + PV LQLGGSDPE LA L+ GY EINLN GCPS V G FGA LM +
Sbjct: 67 EEEQPVALQLGGSDPEALAQCAKLAQERGYDEINLNVGCPSDRVQN-GRFGACLMADAQL 125
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ + M + S+P+TVK R+G+D DSYE L F+DTVS GG F +HAR A L
Sbjct: 126 VADCVKAMQDVV--SIPVTVKTRIGIDEQDSYEFLCDFIDTVSTKGGCEMFIIHARKAWL 183
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 184 SGLSPKENREIPPLDYPRVYQL 205
[139][TOP]
>UniRef100_A9GQB8 tRNA-dihydrouridine synthase A n=1 Tax=Phaeobacter gallaeciensis
BS107 RepID=A9GQB8_9RHOB
Length = 315
Score = 142 bits (357), Expect = 2e-32
Identities = 78/143 (54%), Positives = 94/143 (65%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HPV LQLGGSDP ELA A A GY EINLNCGCPS V GAFGA LMK+P +VA
Sbjct: 47 EHPVALQLGGSDPAELAQAAAFGAEAGYDEINLNCGCPSDRVQ-SGAFGAVLMKSPDLVA 105
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E M D + +TVKCR+GVD D E L F++ ++AAG R ++HAR A L G
Sbjct: 106 ECVAAMRAKVD--VEVTVKCRIGVDDQDPQEVLPVFLERIAAAGCER-VTIHARKAWLKG 162
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR IPPL Y V+++ AE
Sbjct: 163 LSPKENRDIPPLDYEIVHQMKAE 185
[140][TOP]
>UniRef100_UPI00016A39EF tRNA-dihydrouridine synthase A n=1 Tax=Burkholderia thailandensis
TXDOH RepID=UPI00016A39EF
Length = 339
Score = 141 bits (356), Expect = 2e-32
Identities = 77/138 (55%), Positives = 94/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P ELA + L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 65 PVALQLGGSEPAELAHSARLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADC 123
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD + Y + FV TV++A G F VHAR AIL GLS
Sbjct: 124 VKAMRDAV--SIPVTVKHRIGVDAIEDYAFVRDFVGTVASA-GCEVFVVHARNAILKGLS 180
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y YRL
Sbjct: 181 PKENREIPPLKYDYAYRL 198
[141][TOP]
>UniRef100_Q2SVN4 Dihydrouridine synthase n=1 Tax=Burkholderia thailandensis E264
RepID=Q2SVN4_BURTA
Length = 339
Score = 141 bits (356), Expect = 2e-32
Identities = 77/138 (55%), Positives = 94/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P ELA + L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 65 PVALQLGGSEPAELAHSARLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADC 123
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD + Y + FV TV++A G F VHAR AIL GLS
Sbjct: 124 VKAMRDAV--SIPVTVKHRIGVDAIEDYAFVRDFVGTVASA-GCEVFVVHARNAILKGLS 180
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y YRL
Sbjct: 181 PKENREIPPLKYDYAYRL 198
[142][TOP]
>UniRef100_C6XJ28 TIM-barrel protein, yjbN family n=1 Tax=Hirschia baltica ATCC 49814
RepID=C6XJ28_HIRBI
Length = 327
Score = 141 bits (356), Expect = 2e-32
Identities = 79/140 (56%), Positives = 92/140 (65%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+ P+ LQLGGSDP +LA A + YGY+EINLNCGCPS V GAFGA LM P VA
Sbjct: 60 EQPLALQLGGSDPIKLAQASKVGEDYGYSEINLNCGCPSDRVQ-SGAFGACLMAQPERVA 118
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E M A D +P+TVKCR+G+D DD E L FV+TV+ A G + F VHAR A L G
Sbjct: 119 ECISAMQNAVD--IPVTVKCRIGIDDDDPNERLFSFVNTVADA-GCQVFIVHARKAWLKG 175
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
LSP +NR IPPL Y V RL
Sbjct: 176 LSPKENRDIPPLDYDLVVRL 195
[143][TOP]
>UniRef100_C0EM16 Putative uncharacterized protein n=1 Tax=Neisseria flavescens
NRL30031/H210 RepID=C0EM16_NEIFL
Length = 319
Score = 141 bits (356), Expect = 2e-32
Identities = 73/145 (50%), Positives = 92/145 (63%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ + PV LQLGGSDP +LA A + YGY E+NLNCGCPSP V KGAFGA LM +
Sbjct: 45 EGEQPVALQLGGSDPHDLAIAAKAAETYGYNEVNLNCGCPSPRVQ-KGAFGACLMNDVDL 103
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M +A + +P+TVK R+GVD Y+ + FV + R + VHAR A L
Sbjct: 104 VADCLNAMQDAVE--IPVTVKHRIGVDRQTEYQVVADFVGMLREKTACRTYIVHARNAWL 161
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPL+Y YVYRL E
Sbjct: 162 DGLSPKENREVPPLKYEYVYRLKQE 186
[144][TOP]
>UniRef100_B8KDL1 tRNA-dihydrouridine synthase A n=1 Tax=Vibrio parahaemolyticus 16
RepID=B8KDL1_VIBPA
Length = 315
Score = 141 bits (356), Expect = 2e-32
Identities = 73/142 (51%), Positives = 90/142 (63%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HPV LQLGGS+P++LA L+ GY EINLN GCPS V G FGA LM P +
Sbjct: 44 EEEHPVALQLGGSNPQDLATCAKLAAERGYDEINLNVGCPSDRVQN-GRFGACLMAEPQL 102
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M + D +P+TVK R+G+D DSYE L FV VS GG F++HAR A L
Sbjct: 103 VADCVAAMRDVVD--IPVTVKTRIGIDDQDSYEFLTDFVSIVSEKGGCDQFTIHARKAWL 160
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y+L
Sbjct: 161 SGLSPKENREIPPLDYPRAYQL 182
[145][TOP]
>UniRef100_UPI00016A900B tRNA-dihydrouridine synthase A n=1 Tax=Burkholderia oklahomensis
EO147 RepID=UPI00016A900B
Length = 339
Score = 141 bits (355), Expect = 3e-32
Identities = 77/138 (55%), Positives = 94/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P +LA + L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 65 PVALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADC 123
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD + Y + FV TV+AA G F VHAR AIL GLS
Sbjct: 124 VKAMCDAV--SIPVTVKHRIGVDAVEDYAFVRDFVGTVAAA-GCDVFIVHARNAILKGLS 180
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y YRL
Sbjct: 181 PKENREIPPLKYDYAYRL 198
[146][TOP]
>UniRef100_Q46ZQ2 Dihydrouridine synthase TIM-barrel protein yjbN n=1 Tax=Ralstonia
eutropha JMP134 RepID=Q46ZQ2_RALEJ
Length = 341
Score = 141 bits (355), Expect = 3e-32
Identities = 75/141 (53%), Positives = 95/141 (67%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++HPV LQLGGS+P +LA A L +GY E+NLNCGCPS V +GAFGA LM P +V
Sbjct: 58 AEHPVALQLGGSEPADLAVAARLGQQWGYAEVNLNCGCPSERVQ-RGAFGACLMAEPQLV 116
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ + M +A S+P+TVK R+G+D + Y + FV TV+ A G F VHAR AIL
Sbjct: 117 ADCVKAMRDAV--SIPVTVKHRIGIDKVEHYGFVRDFVGTVAQA-GCETFIVHARNAILK 173
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPLRY Y+L
Sbjct: 174 GLSPKENREIPPLRYEVAYQL 194
[147][TOP]
>UniRef100_Q21X34 TIM-barrel protein, yjbN family n=1 Tax=Rhodoferax ferrireducens
T118 RepID=Q21X34_RHOFD
Length = 331
Score = 141 bits (355), Expect = 3e-32
Identities = 74/142 (52%), Positives = 95/142 (66%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HPV LQLGGS+P +LA L +GY E+NLNCGCPS V +GAFGA LM P +
Sbjct: 63 EQEHPVALQLGGSEPADLARCAKLGEEWGYDEVNLNCGCPSERVQ-RGAFGACLMAEPQL 121
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ + M + S+P+TVK R+G+D +SYE + FV +VS A G R F VHAR A L
Sbjct: 122 VADCVKAMVDVV--SVPVTVKHRIGIDKTESYEFVRDFVGSVSEA-GCRTFIVHARNAWL 178
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR +PPLRY Y+L
Sbjct: 179 KGLSPKENRDVPPLRYELAYQL 200
[148][TOP]
>UniRef100_Q0K9D6 Transfer RNA-dihydrouridine synthase n=1 Tax=Ralstonia eutropha H16
RepID=Q0K9D6_RALEH
Length = 345
Score = 141 bits (355), Expect = 3e-32
Identities = 75/144 (52%), Positives = 96/144 (66%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++HPV LQLGGS+P +LA A L +GY E+NLNCGCPS V +GAFGA LM P +V
Sbjct: 66 AEHPVALQLGGSEPADLAMAAKLGQQWGYAEVNLNCGCPSERVQ-RGAFGACLMAEPQLV 124
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ + M +A D +P+TVK R+G+D + Y+ + FV V+ A G F VHAR AIL
Sbjct: 125 ADCVKAMRDAVD--IPVTVKHRIGIDKIEHYDFVRDFVGRVAEA-GCGTFIVHARNAILK 181
Query: 452 GLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR IPPLRY Y+L E
Sbjct: 182 GLSPKENREIPPLRYEVAYQLKQE 205
[149][TOP]
>UniRef100_B4RFU0 tRNA-dihydrouridine synthase n=1 Tax=Phenylobacterium zucineum HLK1
RepID=B4RFU0_PHEZH
Length = 343
Score = 141 bits (355), Expect = 3e-32
Identities = 79/143 (55%), Positives = 91/143 (63%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HPV LQLGGS+P ELAAA + GY EINLN GCPS V G FGA LM+ P +VA
Sbjct: 60 EHPVALQLGGSEPAELAAAARIGEAEGYDEINLNVGCPSDRVQ-SGRFGACLMREPELVA 118
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E M A +P+TVKCR+GVD D ESL VD + A GV F VHAR A L G
Sbjct: 119 ECMAAMGAAV--KVPVTVKCRIGVDDQDPEESLFTLVD-LCAEAGVTSFVVHARKAWLKG 175
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR +PPL Y V+RL AE
Sbjct: 176 LSPKENRDVPPLDYPLVWRLKAE 198
[150][TOP]
>UniRef100_A5GPV9 TRNA-dihydrouridine synthase A n=1 Tax=Synechococcus sp. RCC307
RepID=A5GPV9_SYNR3
Length = 335
Score = 141 bits (355), Expect = 3e-32
Identities = 78/140 (55%), Positives = 92/140 (65%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+ P+ LQLGG DP LA A L+ +GY EINLN GCPSP V KG FGA LM P VA
Sbjct: 67 EKPIALQLGGDDPALLAEAAELAERWGYDEINLNVGCPSPKVK-KGRFGACLMAEPQQVA 125
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
M A LP+TVK R+G+D DSY+ LL FVDTV+AA G + F+VHAR A L G
Sbjct: 126 RCVEAMGAAC--RLPVTVKHRIGIDERDSYDELLDFVDTVAAA-GCQRFAVHARKAWLEG 182
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
L P QNR++PPLRY V+ L
Sbjct: 183 LDPKQNRTVPPLRYDLVHAL 202
[151][TOP]
>UniRef100_A0KT37 TIM-barrel protein, yjbN family n=1 Tax=Shewanella sp. ANA-3
RepID=A0KT37_SHESA
Length = 334
Score = 141 bits (355), Expect = 3e-32
Identities = 76/142 (53%), Positives = 91/142 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HP+ LQLGGS+P ELA L+ GY E+NLN GCPS V G FGA LM P +
Sbjct: 64 QEEHPLALQLGGSNPAELARCAKLAAERGYDEVNLNVGCPSDRVQ-NGRFGACLMAEPEL 122
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M +A D +P+TVK R+G+D DSYE L F+DTV A G F +HAR A L
Sbjct: 123 VAECVDAMKQAVD--IPVTVKTRIGIDEQDSYEFLTHFIDTVMAK-GCGEFIIHARKAWL 179
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 180 QGLSPKENREIPPLDYDRVYQL 201
[152][TOP]
>UniRef100_C1XIP4 tRNA dihydrouridine synthase A n=1 Tax=Meiothermus ruber DSM 1279
RepID=C1XIP4_MEIRU
Length = 339
Score = 141 bits (355), Expect = 3e-32
Identities = 79/140 (56%), Positives = 94/140 (67%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HPV LQLGGS PE+LA A + +GY EINLN GCPS V G G FGA LM P +VA
Sbjct: 62 EHPVALQLGGSVPEKLAEAARIGEAWGYDEINLNLGCPSERVQG-GGFGACLMLEPDLVA 120
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E+ M +A +P+T K RLGVD + Y L RFV+ + A GV F VHAR A L G
Sbjct: 121 ESMAAMRQAV--KIPVTAKHRLGVDEVEDYRYLARFVEKL-AGVGVGVFIVHARKAYLKG 177
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
LSPA+NR+IPPLRY +VYRL
Sbjct: 178 LSPAENRTIPPLRYDWVYRL 197
[153][TOP]
>UniRef100_B7QQ14 tRNA-dihydrouridine synthase A n=1 Tax=Ruegeria sp. R11
RepID=B7QQ14_9RHOB
Length = 320
Score = 141 bits (355), Expect = 3e-32
Identities = 77/143 (53%), Positives = 93/143 (65%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HPV LQLGGSDP ELA A L GY EINLNCGCPS V GAFGA LMK+P +VA
Sbjct: 52 EHPVALQLGGSDPAELAEAARLGGQAGYDEINLNCGCPSDRVQ-SGAFGAVLMKSPDLVA 110
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E M D + +TVKCR+GVD D E L F+ ++AA G + ++HAR A L G
Sbjct: 111 ECVAAMQAKVD--VEVTVKCRIGVDDQDPQEVLPGFIAAIAAA-GCKRVTIHARKAWLKG 167
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR IPPL Y V+++ AE
Sbjct: 168 LSPKENRDIPPLDYDIVHQMKAE 190
[154][TOP]
>UniRef100_A6GGZ7 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica
SIR-1 RepID=A6GGZ7_9DELT
Length = 362
Score = 141 bits (355), Expect = 3e-32
Identities = 78/144 (54%), Positives = 95/144 (65%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
S+HP+ LQLGG DPE LAA ++ GY E+N+N GCPS V G FG LMK P+ V
Sbjct: 73 SEHPLALQLGGDDPEALAACARIAAELGYDEVNINVGCPSDRVQ-SGNFGVCLMKDPARV 131
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
+ M EA + LP+TVK R+GVD D YE +L FVD V+AA F+VHAR A L
Sbjct: 132 RDCVVAMREAVE--LPVTVKHRIGVDELDRYEDMLHFVDVVAAA-EPDLFTVHARKAWLQ 188
Query: 452 GLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP QNR++PPLRY V+RLA E
Sbjct: 189 GLSPKQNRNVPPLRYAEVHRLARE 212
[155][TOP]
>UniRef100_A6FP55 tRNA-dihydrouridine synthase A n=1 Tax=Roseobacter sp. AzwK-3b
RepID=A6FP55_9RHOB
Length = 337
Score = 141 bits (355), Expect = 3e-32
Identities = 85/164 (51%), Positives = 100/164 (60%)
Frame = +2
Query: 29 VGAVASARDGVPPPPSASPPQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCP 208
V A A R G SP +HPV LQLGGSDP+ELA A + GY EINLN GCP
Sbjct: 43 VTAAALVRGGALHLLDYSP--QEHPVALQLGGSDPQELAQAARMGAEAGYDEINLNVGCP 100
Query: 209 SPTVAGKGAFGAALMKTPSVVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVD 388
S V G FGA LMK P +V+E M EA+ ++ +TVKCR+GVD D L F+
Sbjct: 101 SDRVQ-SGTFGAVLMKDPGLVSECCAAMIEAS--AVEVTVKCRIGVDDQDPETVLPEFLA 157
Query: 389 TVSAAGGVRHFSVHARAAILGGLSPAQNRSIPPLRYGYVYRLAA 520
VSAA GV+ F++HAR A L GLSP QNR IPPL Y V R+ A
Sbjct: 158 RVSAA-GVQRFTIHARKAWLQGLSPKQNRDIPPLDYDLVLRMKA 200
[156][TOP]
>UniRef100_Q4UFZ2 Putative uncharacterized protein n=1 Tax=Theileria annulata
RepID=Q4UFZ2_THEAN
Length = 408
Score = 141 bits (355), Expect = 3e-32
Identities = 70/142 (49%), Positives = 97/142 (68%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+++HP+V QLGG+ PE L A + +GY EINLN GCPSP V+GKG FGA+LM+ +
Sbjct: 138 ENEHPIVAQLGGNCPETLVEAGRILKKFGYDEINLNVGCPSPRVSGKGCFGASLMREKEL 197
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
V + M + + +P+TVK RLGVD DSYE + FV TVS + G HF +H+R A L
Sbjct: 198 VRDIVHNMIK--ELEIPVTVKTRLGVDESDSYEFVKDFVSTVSQS-GCEHFIIHSRKAWL 254
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
G++P +NR++PPL+Y V+RL
Sbjct: 255 KGINPKKNRTVPPLQYEKVFRL 276
[157][TOP]
>UniRef100_UPI00016B0FD5 tRNA-dihydrouridine synthase A n=1 Tax=Burkholderia pseudomallei
BCC215 RepID=UPI00016B0FD5
Length = 339
Score = 140 bits (354), Expect = 4e-32
Identities = 77/138 (55%), Positives = 94/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P +LA + L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 65 PVALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADC 123
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD + Y + FV TV+AA G F VHAR AIL GLS
Sbjct: 124 VKAMRDAV--SIPVTVKHRIGVDAVEDYAFVRDFVGTVAAA-GCDVFVVHARNAILKGLS 180
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y YRL
Sbjct: 181 PKENREIPPLKYDYAYRL 198
[158][TOP]
>UniRef100_UPI00016AC4A7 tRNA-dihydrouridine synthase A n=2 Tax=Burkholderia pseudomallei
RepID=UPI00016AC4A7
Length = 334
Score = 140 bits (354), Expect = 4e-32
Identities = 77/138 (55%), Positives = 94/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P +LA + L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 49 PVALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADC 107
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD + Y + FV TV+AA G F VHAR AIL GLS
Sbjct: 108 VKAMRDAV--SIPVTVKHRIGVDAVEDYAFVRDFVGTVAAA-GCDVFVVHARNAILKGLS 164
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y YRL
Sbjct: 165 PKENREIPPLKYDYAYRL 182
[159][TOP]
>UniRef100_UPI00016A5D74 tRNA-dihydrouridine synthase A n=1 Tax=Burkholderia ubonensis Bu
RepID=UPI00016A5D74
Length = 339
Score = 140 bits (354), Expect = 4e-32
Identities = 77/141 (54%), Positives = 95/141 (67%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
S+ PV LQLGGS+ ++LA A L +GY EINLNCGCPS V +GAFGA LM P +V
Sbjct: 62 SESPVALQLGGSERDDLARAAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLV 120
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ + M +A S+P+TVK R+GVD + Y + FV TV+ A G F VHAR AIL
Sbjct: 121 ADCVKAMRDAV--SVPVTVKHRIGVDAVEEYAFVRDFVGTVAEA-GCEVFVVHARNAILK 177
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL+Y Y YRL
Sbjct: 178 GLSPKENREIPPLKYDYAYRL 198
[160][TOP]
>UniRef100_Q3JSR2 Dihydrouridine synthase n=1 Tax=Burkholderia pseudomallei 1710b
RepID=Q3JSR2_BURP1
Length = 442
Score = 140 bits (354), Expect = 4e-32
Identities = 77/138 (55%), Positives = 94/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P +LA + L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 168 PVALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADC 226
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD + Y + FV TV+AA G F VHAR AIL GLS
Sbjct: 227 VKAMRDAV--SIPVTVKHRIGVDAVEDYAFVRDFVGTVAAA-GCDVFVVHARNAILKGLS 283
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y YRL
Sbjct: 284 PKENREIPPLKYDYAYRL 301
[161][TOP]
>UniRef100_C6U122 tRNA-dihydrouridine synthase A n=1 Tax=Burkholderia pseudomallei
1710a RepID=C6U122_BURPS
Length = 339
Score = 140 bits (354), Expect = 4e-32
Identities = 77/138 (55%), Positives = 94/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P +LA + L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 65 PVALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADC 123
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD + Y + FV TV+AA G F VHAR AIL GLS
Sbjct: 124 VKAMRDAV--SIPVTVKHRIGVDAVEDYAFVRDFVGTVAAA-GCDVFVVHARNAILKGLS 180
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y YRL
Sbjct: 181 PKENREIPPLKYDYAYRL 198
[162][TOP]
>UniRef100_C5ZFJ9 tRNA-dihydrouridine synthase A n=1 Tax=Burkholderia pseudomallei
1106b RepID=C5ZFJ9_BURPS
Length = 439
Score = 140 bits (354), Expect = 4e-32
Identities = 77/138 (55%), Positives = 94/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P +LA + L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 165 PVALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADC 223
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD + Y + FV TV+AA G F VHAR AIL GLS
Sbjct: 224 VKAMRDAV--SIPVTVKHRIGVDAVEDYAFVRDFVGTVAAA-GCDVFVVHARNAILKGLS 280
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y YRL
Sbjct: 281 PKENREIPPLKYDYAYRL 298
[163][TOP]
>UniRef100_A1V487 tRNA-dihydrouridine synthase A n=2 Tax=Burkholderia mallei
RepID=A1V487_BURMS
Length = 436
Score = 140 bits (354), Expect = 4e-32
Identities = 77/138 (55%), Positives = 94/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P +LA + L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 162 PVALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADC 220
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD + Y + FV TV+AA G F VHAR AIL GLS
Sbjct: 221 VKAMRDAV--SIPVTVKHRIGVDAVEDYAFVRDFVGTVAAA-GCDVFVVHARNAILKGLS 277
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y YRL
Sbjct: 278 PKENREIPPLKYDYAYRL 295
[164][TOP]
>UniRef100_C4KX83 tRNA-dihydrouridine synthase A n=1 Tax=Burkholderia pseudomallei
MSHR346 RepID=C4KX83_BURPS
Length = 439
Score = 140 bits (354), Expect = 4e-32
Identities = 77/138 (55%), Positives = 94/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P +LA + L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 165 PVALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADC 223
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD + Y + FV TV+AA G F VHAR AIL GLS
Sbjct: 224 VKAMRDAV--SIPVTVKHRIGVDAVEDYAFVRDFVGTVAAA-GCDVFVVHARNAILKGLS 280
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y YRL
Sbjct: 281 PKENREIPPLKYDYAYRL 298
[165][TOP]
>UniRef100_C4B1A0 tRNA-dihydrouridine synthase A n=1 Tax=Burkholderia mallei GB8
horse 4 RepID=C4B1A0_BURMA
Length = 439
Score = 140 bits (354), Expect = 4e-32
Identities = 77/138 (55%), Positives = 94/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P +LA + L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 165 PVALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADC 223
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD + Y + FV TV+AA G F VHAR AIL GLS
Sbjct: 224 VKAMRDAV--SIPVTVKHRIGVDAVEDYAFVRDFVGTVAAA-GCDVFVVHARNAILKGLS 280
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y YRL
Sbjct: 281 PKENREIPPLKYDYAYRL 298
[166][TOP]
>UniRef100_B7CTP2 tRNA-dihydrouridine synthase A n=1 Tax=Burkholderia pseudomallei
576 RepID=B7CTP2_BURPS
Length = 439
Score = 140 bits (354), Expect = 4e-32
Identities = 77/138 (55%), Positives = 94/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P +LA + L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 165 PVALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADC 223
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD + Y + FV TV+AA G F VHAR AIL GLS
Sbjct: 224 VKAMRDAV--SIPVTVKHRIGVDAVEDYAFVRDFVGTVAAA-GCDVFVVHARNAILKGLS 280
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y YRL
Sbjct: 281 PKENREIPPLKYDYAYRL 298
[167][TOP]
>UniRef100_B2GYJ9 tRNA-dihydrouridine synthase A n=1 Tax=Burkholderia pseudomallei
1655 RepID=B2GYJ9_BURPS
Length = 339
Score = 140 bits (354), Expect = 4e-32
Identities = 77/138 (55%), Positives = 94/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P +LA + L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 65 PVALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADC 123
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD + Y + FV TV+AA G F VHAR AIL GLS
Sbjct: 124 VKAMRDAV--SIPVTVKHRIGVDAVEDYAFVRDFVGTVAAA-GCDVFVVHARNAILKGLS 180
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y YRL
Sbjct: 181 PKENREIPPLKYDYAYRL 198
[168][TOP]
>UniRef100_A9K7Y5 tRNA-dihydrouridine synthase A n=1 Tax=Burkholderia mallei ATCC
10399 RepID=A9K7Y5_BURMA
Length = 339
Score = 140 bits (354), Expect = 4e-32
Identities = 77/138 (55%), Positives = 94/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P +LA + L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 65 PVALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADC 123
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD + Y + FV TV+AA G F VHAR AIL GLS
Sbjct: 124 VKAMRDAV--SIPVTVKHRIGVDAVEDYAFVRDFVGTVAAA-GCDVFVVHARNAILKGLS 180
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y YRL
Sbjct: 181 PKENREIPPLKYDYAYRL 198
[169][TOP]
>UniRef100_A2S354 tRNA-dihydrouridine synthase A n=6 Tax=Burkholderia mallei
RepID=A2S354_BURM9
Length = 339
Score = 140 bits (354), Expect = 4e-32
Identities = 77/138 (55%), Positives = 94/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P +LA + L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 65 PVALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADC 123
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD + Y + FV TV+AA G F VHAR AIL GLS
Sbjct: 124 VKAMRDAV--SIPVTVKHRIGVDAVEDYAFVRDFVGTVAAA-GCDVFVVHARNAILKGLS 180
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y YRL
Sbjct: 181 PKENREIPPLKYDYAYRL 198
[170][TOP]
>UniRef100_A3N943 TRNA-dihydrouridine synthase A n=7 Tax=Burkholderia pseudomallei
RepID=A3N943_BURP6
Length = 339
Score = 140 bits (354), Expect = 4e-32
Identities = 77/138 (55%), Positives = 94/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P +LA + L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 65 PVALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADC 123
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD + Y + FV TV+AA G F VHAR AIL GLS
Sbjct: 124 VKAMRDAV--SIPVTVKHRIGVDAVEDYAFVRDFVGTVAAA-GCDVFVVHARNAILKGLS 180
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y YRL
Sbjct: 181 PKENREIPPLKYDYAYRL 198
[171][TOP]
>UniRef100_Q04VP3 TRNA-dihydrouridine synthase n=2 Tax=Leptospira borgpetersenii
serovar Hardjo-bovis RepID=Q04VP3_LEPBJ
Length = 339
Score = 140 bits (353), Expect = 5e-32
Identities = 76/141 (53%), Positives = 95/141 (67%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
P+ +QLGG +P+ LA + + YGY+EINLN GCPS V +G FGA LM+TP VAE
Sbjct: 67 PLAIQLGGDNPKALAESSKIGEDYGYSEINLNVGCPSDRVR-EGNFGACLMETPERVAEL 125
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
M + S+P+TVKCR+G+ ++ E L RF++ V AG VR F VHAR AILGGLS
Sbjct: 126 VCAMD--GNVSIPVTVKCRIGISGKETLEDLCRFIECVRQAG-VRRFIVHARIAILGGLS 182
Query: 461 PAQNRSIPPLRYGYVYRLAAE 523
PAQNR IPPLRY +V L E
Sbjct: 183 PAQNRQIPPLRYAHVESLKKE 203
[172][TOP]
>UniRef100_B8GSM9 tRNA-dihydrouridine synthase A n=1 Tax=Thioalkalivibrio sp.
HL-EbGR7 RepID=B8GSM9_THISH
Length = 336
Score = 140 bits (353), Expect = 5e-32
Identities = 73/140 (52%), Positives = 92/140 (65%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+ LQLGGS+P ELAA ++ +GY E+NLN GCPS V G FGA LM P +VA
Sbjct: 72 EHPLALQLGGSEPGELAACARMAEDHGYDEVNLNVGCPSDRVQ-SGRFGACLMAEPQLVA 130
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ M A LP+TVK R+G+D DSY L F+DTV + G R F +HAR A L G
Sbjct: 131 DCVEAMRSAC--GLPVTVKTRIGIDDRDSYPELTAFIDTVQRS-GCRTFIIHARKAWLQG 187
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
LSP +NR +PPLR+ +VYRL
Sbjct: 188 LSPRENREVPPLRHDWVYRL 207
[173][TOP]
>UniRef100_A3QAB0 TIM-barrel protein, yjbN family n=1 Tax=Shewanella loihica PV-4
RepID=A3QAB0_SHELP
Length = 329
Score = 140 bits (353), Expect = 5e-32
Identities = 77/142 (54%), Positives = 91/142 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HP+ LQLGGS+PE+LA L+ GY E+NLN GCPS V G FGA LM P +
Sbjct: 62 QEEHPLALQLGGSNPEDLAKCAKLAAERGYDEVNLNVGCPSDRVQ-NGRFGACLMAEPDL 120
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M E D +P+TVK R+G+D DSYE L FVD VSAA G F +HAR A L
Sbjct: 121 VAQCVAAMNEVVD--IPVTVKTRIGIDEQDSYEFLTEFVDKVSAA-GCDTFIIHARKAWL 177
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IP L Y VYRL
Sbjct: 178 QGLSPKENREIPELDYDRVYRL 199
[174][TOP]
>UniRef100_C9RM69 TIM-barrel protein, yjbN family n=1 Tax=Fibrobacter succinogenes
subsp. succinogenes S85 RepID=C9RM69_FIBSU
Length = 345
Score = 140 bits (353), Expect = 5e-32
Identities = 75/143 (52%), Positives = 98/143 (68%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP VLQLGGS+P +LA+A L G++E+NLNCGCPS V G FGA LMK +VVA
Sbjct: 61 EHPAVLQLGGSNPADLASASKLVEAAGFSEVNLNCGCPSDRVQ-NGNFGACLMKEKNVVA 119
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ + M +A S+P+++KCR+GVD DS+E F+ TV A G + F VHAR A L G
Sbjct: 120 DCFKAMQDAV--SIPVSIKCRIGVDDLDSWEFFTDFIQTVRDA-GCKIFIVHARKAWLKG 176
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR +PPL Y +V+RL AE
Sbjct: 177 LSPKENREVPPLHYEFVHRLKAE 199
[175][TOP]
>UniRef100_C2IMY2 tRNA dihydrouridine synthase A n=1 Tax=Vibrio cholerae TMA 21
RepID=C2IMY2_VIBCH
Length = 315
Score = 140 bits (353), Expect = 5e-32
Identities = 72/142 (50%), Positives = 90/142 (63%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HPV LQ GGS+P++LA L+ GY EINLN GCPS V G FGA LM P +
Sbjct: 43 QEEHPVALQFGGSNPKDLAHCAKLAQERGYDEINLNVGCPSDRVQN-GRFGACLMGEPDL 101
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M D +P+TVK R+G+D DSYE L +F+ TV+ GG F++HAR A L
Sbjct: 102 VAECVAAMRAVVD--IPVTVKTRIGIDDQDSYEFLTQFIATVAEKGGCEQFTIHARKAWL 159
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y++
Sbjct: 160 SGLSPKENREIPPLDYPRAYQI 181
[176][TOP]
>UniRef100_B6B5L6 tRNA-dihydrouridine synthase A n=1 Tax=Rhodobacterales bacterium
Y4I RepID=B6B5L6_9RHOB
Length = 316
Score = 140 bits (353), Expect = 5e-32
Identities = 77/142 (54%), Positives = 93/142 (65%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HPV LQLGGSDP ELA A L GY EINLNCGCPS V GAFGA LM+TP +VA
Sbjct: 47 EHPVALQLGGSDPGELAEAARLGAEAGYDEINLNCGCPSDRVQ-SGAFGAVLMQTPELVA 105
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ M E D + +TVKCR+GVD + E L F++ + AAG R ++HAR A L G
Sbjct: 106 DCVAAMRETVD--VDVTVKCRIGVDEQEPEEVLPEFLEKIRAAGCGR-VTIHARKAWLQG 162
Query: 455 LSPAQNRSIPPLRYGYVYRLAA 520
LSP +NR IPPL Y V+R+ A
Sbjct: 163 LSPKENRDIPPLDYELVHRMKA 184
[177][TOP]
>UniRef100_A9F807 tRNA-dihydrouridine synthase A n=1 Tax=Phaeobacter gallaeciensis
2.10 RepID=A9F807_9RHOB
Length = 390
Score = 140 bits (353), Expect = 5e-32
Identities = 84/165 (50%), Positives = 100/165 (60%)
Frame = +2
Query: 29 VGAVASARDGVPPPPSASPPQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCP 208
V A A R G SP +HPV LQLGGSDP ELA A GY EINLNCGCP
Sbjct: 102 VTAPALVRGGALHLLDHSP--QEHPVALQLGGSDPAELAQAAEFGAEAGYDEINLNCGCP 159
Query: 209 SPTVAGKGAFGAALMKTPSVVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVD 388
S V GAFGA LMK+P +VAE M D + +TVKCR+GVD D E L F++
Sbjct: 160 SDRVQ-SGAFGAVLMKSPDLVAECVAAMQAKVD--VEVTVKCRIGVDDQDPQEVLPVFLE 216
Query: 389 TVSAAGGVRHFSVHARAAILGGLSPAQNRSIPPLRYGYVYRLAAE 523
++AAG R ++HAR A L GLSP +NR IPPL Y V+++ AE
Sbjct: 217 RIAAAGCER-VTIHARKAWLKGLSPKENRDIPPLDYEIVHQMKAE 260
[178][TOP]
>UniRef100_A2PAZ3 TIM-barrel protein, yjbN family n=1 Tax=Vibrio cholerae 1587
RepID=A2PAZ3_VIBCH
Length = 327
Score = 140 bits (353), Expect = 5e-32
Identities = 72/142 (50%), Positives = 90/142 (63%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HPV LQ GGS+P++LA L+ GY EINLN GCPS V G FGA LM P +
Sbjct: 55 QEEHPVALQFGGSNPKDLAHCAKLAQERGYDEINLNVGCPSDRVQN-GRFGACLMGEPDL 113
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M D +P+TVK R+G+D DSYE L +F+ TV+ GG F++HAR A L
Sbjct: 114 VAECVATMRAVVD--IPVTVKTRIGIDDQDSYEFLTQFIATVAEKGGCEQFTIHARKAWL 171
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y++
Sbjct: 172 SGLSPKENREIPPLDYPRAYQI 193
[179][TOP]
>UniRef100_Q9KUX9 tRNA-dihydrouridine synthase A n=17 Tax=Vibrio cholerae
RepID=DUSA_VIBCH
Length = 327
Score = 140 bits (353), Expect = 5e-32
Identities = 72/142 (50%), Positives = 90/142 (63%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HPV LQ GGS+P++LA L+ GY EINLN GCPS V G FGA LM P +
Sbjct: 55 QEEHPVALQFGGSNPKDLAHCAKLAQERGYDEINLNVGCPSDRVQN-GRFGACLMGEPDL 113
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M D +P+TVK R+G+D DSYE L +F+ TV+ GG F++HAR A L
Sbjct: 114 VAECVAAMRAVVD--IPVTVKTRIGIDDQDSYEFLTQFIATVAEKGGCEQFTIHARKAWL 171
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y++
Sbjct: 172 SGLSPKENREIPPLDYPRAYQI 193
[180][TOP]
>UniRef100_Q6F831 tRNA-dihydrouridine synthase A n=1 Tax=Acinetobacter sp. ADP1
RepID=Q6F831_ACIAD
Length = 341
Score = 140 bits (352), Expect = 7e-32
Identities = 73/140 (52%), Positives = 93/140 (66%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+VLQLGGS+P++LA ++ +GY E+NLN GCPS V GA LM P +VA
Sbjct: 69 EHPIVLQLGGSNPKDLAECTKMAQDWGYDEVNLNVGCPSDRVQ-NNKIGACLMAEPDLVA 127
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E +M + D +P+ VK R+G+D SY+ +L FVDTV A G HF VHAR A+L G
Sbjct: 128 ECIAKMQQVVD--IPVHVKHRIGIDDMQSYDEMLNFVDTV-AKTGCHHFVVHARIALLKG 184
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
LSP +NR IPPLRY VYRL
Sbjct: 185 LSPKENREIPPLRYEDVYRL 204
[181][TOP]
>UniRef100_Q5LQV9 tRNA-dihydrouridine synthase A n=1 Tax=Ruegeria pomeroyi
RepID=Q5LQV9_SILPO
Length = 344
Score = 140 bits (352), Expect = 7e-32
Identities = 76/142 (53%), Positives = 91/142 (64%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HPV LQLGGSDPEELA A L GY EINLNCGCPS V G FGA LMK P +VA
Sbjct: 64 EHPVALQLGGSDPEELAQAARLGAEAGYDEINLNCGCPSDRVQ-SGTFGAVLMKHPGLVA 122
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ M EA D + +TVKCR+GVD D L F++ ++ A G + +HAR A L G
Sbjct: 123 DCVTAMREAVD--VEVTVKCRIGVDDQDPETVLPEFLEQIAGA-GCQRVIIHARKAWLQG 179
Query: 455 LSPAQNRSIPPLRYGYVYRLAA 520
LSP +NR IPPL Y V+R+ A
Sbjct: 180 LSPKENRDIPPLDYDLVHRMKA 201
[182][TOP]
>UniRef100_Q39GW1 Dihydrouridine synthase TIM-barrel protein yjbN n=1
Tax=Burkholderia sp. 383 RepID=Q39GW1_BURS3
Length = 344
Score = 140 bits (352), Expect = 7e-32
Identities = 76/141 (53%), Positives = 96/141 (68%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++ PV LQLGGS+ ++LA A L +GY EINLNCGCPS V +GAFGA LM PS+V
Sbjct: 62 NESPVALQLGGSERDDLARAAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMNEPSLV 120
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ + M +A S+P+TVK R+GVD + Y + FV TV+ A G F VHAR AIL
Sbjct: 121 ADCVKAMRDAV--SVPVTVKHRIGVDAVEDYAFVRDFVGTVAEA-GCETFVVHARNAILK 177
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL+Y Y Y+L
Sbjct: 178 GLSPKENREIPPLKYDYAYQL 198
[183][TOP]
>UniRef100_Q12BL2 TIM-barrel protein, yjbN family n=1 Tax=Polaromonas sp. JS666
RepID=Q12BL2_POLSJ
Length = 344
Score = 140 bits (352), Expect = 7e-32
Identities = 76/143 (53%), Positives = 94/143 (65%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HPV LQLGGS+P ELA L +GY EINLNCGCPS V +G+FGA LM P +VA
Sbjct: 77 EHPVALQLGGSEPAELAQCATLGEQWGYDEINLNCGCPSERVQ-RGSFGACLMAEPQLVA 135
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ + M + S+P+TVK R+G+D +SY + FV VS A G F VHAR A L G
Sbjct: 136 DCVKAMVDVV--SVPVTVKHRIGIDKGESYGFVRDFVGAVSEA-GCSTFIVHARNAWLKG 192
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR +PPLRY V+RL AE
Sbjct: 193 LSPKENREVPPLRYELVHRLKAE 215
[184][TOP]
>UniRef100_B3R1G8 tRNA-dihydrouridine synthase A n=1 Tax=Cupriavidus taiwanensis
RepID=B3R1G8_CUPTR
Length = 337
Score = 140 bits (352), Expect = 7e-32
Identities = 75/144 (52%), Positives = 96/144 (66%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++HPV LQLGGS+P +LA A L +GY EINLNCGCPS V +GAFGA LM P +V
Sbjct: 58 AEHPVALQLGGSEPADLAMAAKLGQQWGYAEINLNCGCPSERVQ-RGAFGACLMAEPELV 116
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ + M +A + +P+TVK R+G+D + Y+ + FV V+ A G F VHAR AIL
Sbjct: 117 ADCVKAMRDAVE--IPVTVKHRIGIDKIEHYDFVRDFVGKVAQA-GCGTFIVHARNAILK 173
Query: 452 GLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR IPPLRY Y+L E
Sbjct: 174 GLSPKENREIPPLRYEVAYQLKRE 197
[185][TOP]
>UniRef100_A1TQ28 TIM-barrel protein, yjbN family n=1 Tax=Acidovorax citrulli AAC00-1
RepID=A1TQ28_ACIAC
Length = 347
Score = 140 bits (352), Expect = 7e-32
Identities = 77/143 (53%), Positives = 96/143 (67%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HPV LQLGGS+P +LA + L +GY EINLNCGCPS V +GAFGA LM P +VA
Sbjct: 74 EHPVALQLGGSEPGDLAHSARLGERWGYGEINLNCGCPSERVQ-RGAFGACLMNEPRLVA 132
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ + M +A S+P+TVK R+G+ + Y + FV TV+ A G R F VHAR A L G
Sbjct: 133 DCVKAMVDAV--SVPVTVKHRIGIGRSEEYAFVRDFVGTVAEA-GCRVFIVHARNAWLEG 189
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR IPPLRY V+RL AE
Sbjct: 190 LSPKENREIPPLRYDVVHRLKAE 212
[186][TOP]
>UniRef100_C6QGC3 TIM-barrel protein, yjbN family n=1 Tax=Hyphomicrobium
denitrificans ATCC 51888 RepID=C6QGC3_9RHIZ
Length = 323
Score = 140 bits (352), Expect = 7e-32
Identities = 76/142 (53%), Positives = 91/142 (64%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+ LQLGGSDP +LA A + GY EINLN GCPS V +G FGA LM P +VA
Sbjct: 47 EHPIALQLGGSDPAKLAEAARIGAELGYDEINLNVGCPSDRVQ-EGRFGACLMSEPELVA 105
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
M A +P+TVKCR+G+D D+ E L RF+D V+ AG R F VHAR A L G
Sbjct: 106 ACVAAM--RAHQPVPVTVKCRIGIDDQDAEEDLRRFIDVVADAGCTR-FVVHARKAWLKG 162
Query: 455 LSPAQNRSIPPLRYGYVYRLAA 520
LSP +NR +PPL Y VYRL A
Sbjct: 163 LSPKENREVPPLDYERVYRLKA 184
[187][TOP]
>UniRef100_C5AGQ2 Dihydrouridine synthase n=1 Tax=Burkholderia glumae BGR1
RepID=C5AGQ2_BURGB
Length = 336
Score = 140 bits (352), Expect = 7e-32
Identities = 76/138 (55%), Positives = 94/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P++LA + L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 68 PVALQLGGSEPDDLAKSARLGENWGYDEINLNCGCPSERVQ-RGAFGACLMNEPGLVADC 126
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD + Y + FV TV+ A G F VHAR AIL GLS
Sbjct: 127 VKAMRDAV--SVPVTVKHRIGVDAVEEYAFVRDFVGTVAQA-GCDVFIVHARNAILKGLS 183
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y YRL
Sbjct: 184 PKENREIPPLKYDYAYRL 201
[188][TOP]
>UniRef100_A3JPT0 TRNA-dihydrouridine synthase A n=1 Tax=Rhodobacterales bacterium
HTCC2150 RepID=A3JPT0_9RHOB
Length = 337
Score = 140 bits (352), Expect = 7e-32
Identities = 76/144 (52%), Positives = 95/144 (65%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++HPV +QLGGS+P +L A A+S +GY E+NLNCGCPS V G FGA LM P +V
Sbjct: 67 TEHPVAVQLGGSNPAQLQQATAISCDFGYDEVNLNCGCPSDRVQ-SGYFGAVLMAKPDLV 125
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
AE M AA ++ ITVKCR+GVD D L F+ VSAA GV F++HAR A L
Sbjct: 126 AECVSEMKAAA--NVEITVKCRIGVDDQDPQTVLPNFLAKVSAA-GVTRFTIHARKAWLQ 182
Query: 452 GLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR IPPL Y V+++ AE
Sbjct: 183 GLSPKENRDIPPLDYDIVHQMKAE 206
[189][TOP]
>UniRef100_A2PWQ2 TIM-barrel protein, yjbN family n=2 Tax=Vibrio cholerae
RepID=A2PWQ2_VIBCH
Length = 327
Score = 140 bits (352), Expect = 7e-32
Identities = 72/142 (50%), Positives = 89/142 (62%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HPV LQ GGS+P +LA L+ GY EINLN GCPS V G FGA LM P +
Sbjct: 55 QEEHPVALQFGGSNPNDLAHCAKLAQERGYDEINLNVGCPSDRVQN-GRFGACLMGEPDL 113
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M D +P+TVK R+G+D DSYE L +F+ TV+ GG F++HAR A L
Sbjct: 114 VAECVAAMRAVVD--IPVTVKTRIGIDDQDSYEFLTQFIATVAEKGGCEQFTIHARKAWL 171
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y++
Sbjct: 172 SGLSPKENREIPPLDYPRAYQI 193
[190][TOP]
>UniRef100_B6KL93 Dihydrouridine synthase domain-containing protein n=1
Tax=Toxoplasma gondii ME49 RepID=B6KL93_TOXGO
Length = 394
Score = 140 bits (352), Expect = 7e-32
Identities = 76/140 (54%), Positives = 90/140 (64%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+V QLGGSDP+ LA A L G+ EINLN GCPS V +G FGAALMKTP V
Sbjct: 68 EHPIVCQLGGSDPKTLAEAGKLIEKLGFDEINLNVGCPSNRVVSQGCFGAALMKTPETVR 127
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ + +P+TVK R+G D DS + L FV TVS AGG RHF VHAR A L G
Sbjct: 128 DIVHEIRR--HVQIPVTVKTRIGYDHCDSRDVLRNFVQTVS-AGGCRHFIVHARKAWLKG 184
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
+ P +NRS+PPL YG VY L
Sbjct: 185 VDPKKNRSVPPLLYGRVYDL 204
[191][TOP]
>UniRef100_UPI0001BB8E2B tRNA-dihydrouridine synthase A n=1 Tax=Acinetobacter johnsonii
SH046 RepID=UPI0001BB8E2B
Length = 340
Score = 139 bits (351), Expect = 9e-32
Identities = 74/143 (51%), Positives = 94/143 (65%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+VLQLGGS+P++LA ++ +GY E+NLN GCPS V GA LM P +VA
Sbjct: 66 EHPIVLQLGGSNPKDLATCTKMAQDWGYDEVNLNVGCPSDRVQ-NNKIGACLMAEPDLVA 124
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E M A + +P+TVK R+G+D SYE +L FVDTV+ G +F VHAR A+L G
Sbjct: 125 ECIAEMQNAVE--IPVTVKHRIGIDDMHSYEEMLHFVDTVTKT-GCDNFIVHARIALLQG 181
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR IPPLRY VYRL E
Sbjct: 182 LSPKENRDIPPLRYEDVYRLKQE 204
[192][TOP]
>UniRef100_UPI0001BB00FF TIM-barrel protein, yjbN family n=1 Tax=Haliangium ochraceum DSM
14365 RepID=UPI0001BB00FF
Length = 376
Score = 139 bits (351), Expect = 9e-32
Identities = 74/145 (51%), Positives = 94/145 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+++HP+ LQLGG D E LA ++ +GY E+NLN GCPS V+ G+FGA LM P V
Sbjct: 91 EAEHPIALQLGGDDAEALATCARIAEDWGYDEVNLNVGCPSSRVS-SGSFGACLMARPEV 149
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA A M A ++P+TVK R+G+D D YE + FV V+ AG R FSVHAR A L
Sbjct: 150 VARAVEAMRAAV--AIPVTVKHRIGIDDRDRYEDMREFVRVVAEAGADR-FSVHARKAWL 206
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPLRY V+RL E
Sbjct: 207 SGLSPKENREVPPLRYADVHRLKRE 231
[193][TOP]
>UniRef100_Q0HYQ9 TIM-barrel protein, yjbN family n=1 Tax=Shewanella sp. MR-7
RepID=Q0HYQ9_SHESR
Length = 340
Score = 139 bits (351), Expect = 9e-32
Identities = 75/142 (52%), Positives = 90/142 (63%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HP+ LQLGGS+P ELA L+ GY E+NLN GCPS V G FGA LM P +
Sbjct: 69 QEEHPLALQLGGSNPAELARCAKLAAERGYDEVNLNVGCPSDRVQ-NGRFGACLMAEPEL 127
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M + D +P+TVK R+G+D DSYE L F+DTV A G F +HAR A L
Sbjct: 128 VAECVDAMKQVVD--IPVTVKTRIGIDEQDSYEFLTHFIDTVMAK-GCGEFIIHARKAWL 184
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 185 QGLSPKENREIPPLDYDRVYQL 206
[194][TOP]
>UniRef100_B4E8P8 tRNA-dihydrouridine synthase A n=1 Tax=Burkholderia cenocepacia
J2315 RepID=B4E8P8_BURCJ
Length = 353
Score = 139 bits (351), Expect = 9e-32
Identities = 75/141 (53%), Positives = 95/141 (67%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
S+ P+ LQLGGS+ ++LA A L +GY EINLNCGCPS V +GAFGA LM P +V
Sbjct: 71 SESPIALQLGGSERDDLARAAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLV 129
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ + M +A ++P+TVK R+GVD + Y + FV TV+ A G F VHAR AIL
Sbjct: 130 ADCVKAMRDAV--AVPVTVKHRIGVDAVEDYAFVRDFVGTVAEA-GCETFVVHARNAILK 186
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL+Y Y YRL
Sbjct: 187 GLSPKENREIPPLKYDYAYRL 207
[195][TOP]
>UniRef100_Q1V6J4 NifR3/Smm1 family protein n=1 Tax=Vibrio alginolyticus 12G01
RepID=Q1V6J4_VIBAL
Length = 315
Score = 139 bits (351), Expect = 9e-32
Identities = 72/142 (50%), Positives = 89/142 (62%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HP+ LQLGGS+P +LA L+ GY EINLN GCPS V G FGA LM P +
Sbjct: 44 EEEHPLALQLGGSNPADLATCAKLAQERGYDEINLNVGCPSDRVQN-GRFGACLMAEPQL 102
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M + D +P+TVK R+G+D DSYE L FV VS GG F++HAR A L
Sbjct: 103 VADCVAAMKDVVD--IPVTVKTRIGIDDQDSYEFLTDFVSIVSEKGGCEQFTIHARKAWL 160
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y+L
Sbjct: 161 SGLSPKENREIPPLDYPRAYQL 182
[196][TOP]
>UniRef100_C8PX44 tRNA-dihydrouridine synthase A n=1 Tax=Enhydrobacter aerosaccus
SK60 RepID=C8PX44_9GAMM
Length = 330
Score = 139 bits (351), Expect = 9e-32
Identities = 78/141 (55%), Positives = 91/141 (64%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++HP+VLQLGGSDP ELA + YGY EINLN GCPS V GA LM P +V
Sbjct: 67 NEHPLVLQLGGSDPNELARCAKIGQDYGYDEINLNVGCPSDRVQ-HYKIGACLMAEPKLV 125
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ M +A D +P+TVK R+G+D DSYE + FVD V A G +H VHAR A L
Sbjct: 126 ADIVSAMRDAVD--IPVTVKHRIGIDNFDSYEFMADFVDHVVKA-GCQHVIVHARTAWLQ 182
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSP QNR IPPLRY VYRL
Sbjct: 183 GLSPKQNREIPPLRYEDVYRL 203
[197][TOP]
>UniRef100_C5T8W2 TIM-barrel protein, yjbN family n=1 Tax=Acidovorax delafieldii 2AN
RepID=C5T8W2_ACIDE
Length = 313
Score = 139 bits (351), Expect = 9e-32
Identities = 73/140 (52%), Positives = 94/140 (67%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HPV LQLGGS+P +LA L +GY EINLNCGCPS V +GAFGA LM P +VA
Sbjct: 47 EHPVALQLGGSEPADLAHCARLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVA 105
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ + M + +P+TVK R+G+D D+SY + F+ TV+AA G F VHAR A L G
Sbjct: 106 DCVKAMVDVV--QIPVTVKHRIGIDKDESYGFVRDFIGTVAAA-GCEVFIVHARNAWLKG 162
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
LSP +NR +PPLRY V++L
Sbjct: 163 LSPKENREVPPLRYAVVHQL 182
[198][TOP]
>UniRef100_C3X336 tRNA-dihydrouridine synthase A n=1 Tax=Oxalobacter formigenes
HOxBLS RepID=C3X336_OXAFO
Length = 328
Score = 139 bits (351), Expect = 9e-32
Identities = 75/142 (52%), Positives = 95/142 (66%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HPV LQLGGS+P ELA L +GY EINLNCGCPS V KGAFGA LMK +
Sbjct: 57 EEEHPVALQLGGSEPAELAQCAKLGEKWGYDEINLNCGCPSERVQ-KGAFGACLMKESKL 115
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ R M +A S+ +TVK R+G+D +Y+ + F+ ++ A G + F VHAR AIL
Sbjct: 116 VADCVRAMKDAV--SIDVTVKHRIGIDDMHTYDFVRDFIGEIAGA-GCQTFIVHARNAIL 172
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPLRY VY+L
Sbjct: 173 KGLSPKENREIPPLRYDVVYQL 194
[199][TOP]
>UniRef100_C1V2W0 tRNA dihydrouridine synthase A n=1 Tax=Haliangium ochraceum DSM
14365 RepID=C1V2W0_9DELT
Length = 373
Score = 139 bits (351), Expect = 9e-32
Identities = 74/145 (51%), Positives = 94/145 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+++HP+ LQLGG D E LA ++ +GY E+NLN GCPS V+ G+FGA LM P V
Sbjct: 88 EAEHPIALQLGGDDAEALATCARIAEDWGYDEVNLNVGCPSSRVS-SGSFGACLMARPEV 146
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA A M A ++P+TVK R+G+D D YE + FV V+ AG R FSVHAR A L
Sbjct: 147 VARAVEAMRAAV--AIPVTVKHRIGIDDRDRYEDMREFVRVVAEAGADR-FSVHARKAWL 203
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR +PPLRY V+RL E
Sbjct: 204 SGLSPKENREVPPLRYADVHRLKRE 228
[200][TOP]
>UniRef100_A7K637 TIM-barrel protein, YjbN family n=2 Tax=Vibrio sp. Ex25
RepID=A7K637_9VIBR
Length = 354
Score = 139 bits (351), Expect = 9e-32
Identities = 72/142 (50%), Positives = 89/142 (62%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HP+ LQLGGS+PE+LA L+ GY E+NLN GCPS V G FGA LM P +
Sbjct: 83 EEEHPLALQLGGSNPEDLAKCAKLAQERGYDEVNLNVGCPSDRVQN-GRFGACLMAEPQL 141
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M D +P+TVK R+G+D DSYE L FV VS GG F++HAR A L
Sbjct: 142 VADCVAAMKGVVD--IPVTVKTRIGIDDQDSYEFLTDFVSIVSEKGGCEQFTIHARKAWL 199
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y+L
Sbjct: 200 SGLSPKENREIPPLDYPRAYQL 221
[201][TOP]
>UniRef100_B9Q1U8 Dihydrouridine synthase domain-containing protein, putative n=2
Tax=Toxoplasma gondii RepID=B9Q1U8_TOXGO
Length = 394
Score = 139 bits (351), Expect = 9e-32
Identities = 75/140 (53%), Positives = 90/140 (64%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HP+V QLGGSDP+ LA A L G+ EINLN GCPS V +G FGAALMKTP V
Sbjct: 68 EHPIVCQLGGSDPKTLAEAGKLIEKLGFDEINLNVGCPSNRVVSQGCFGAALMKTPETVR 127
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ + +P+TVK R+G D DS + L FV TVS AGG RHF +HAR A L G
Sbjct: 128 DIVHEIRR--HVQIPVTVKTRIGYDHCDSRDVLRNFVQTVS-AGGCRHFIIHARKAWLKG 184
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
+ P +NRS+PPL YG VY L
Sbjct: 185 VDPKKNRSVPPLLYGRVYDL 204
[202][TOP]
>UniRef100_UPI0001BBA631 tRNA-dihydrouridine synthase A n=1 Tax=Acinetobacter lwoffii SH145
RepID=UPI0001BBA631
Length = 341
Score = 139 bits (350), Expect = 1e-31
Identities = 74/143 (51%), Positives = 93/143 (65%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+ P+VLQLGGS+P++LA ++ +GY E+NLN GCPS V GA LM P +VA
Sbjct: 66 EQPIVLQLGGSNPKDLAICTKMAQDWGYNEVNLNVGCPSDRVQ-NNKIGACLMAEPDLVA 124
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E M A D +P+TVK R+G+D SYE +L FVDTV A G +F VHAR A+L G
Sbjct: 125 ECIAEMRHAVD--IPVTVKHRIGIDDMQSYEEMLHFVDTV-AKTGCNNFIVHARIALLKG 181
Query: 455 LSPAQNRSIPPLRYGYVYRLAAE 523
LSP +NR +PPLRY VYRL E
Sbjct: 182 LSPKENRDVPPLRYEDVYRLKQE 204
[203][TOP]
>UniRef100_UPI00016B0471 tRNA-dihydrouridine synthase A n=1 Tax=Burkholderia pseudomallei
NCTC 13177 RepID=UPI00016B0471
Length = 339
Score = 139 bits (350), Expect = 1e-31
Identities = 76/138 (55%), Positives = 93/138 (67%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P +LA + L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 65 PVALQLGGSEPADLAHSAKLGERWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADC 123
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD + Y + FV TV+ A G F VHAR AIL GLS
Sbjct: 124 VKAMRDAV--SIPVTVKHRIGVDAVEDYAFVRDFVGTVATA-GCDVFVVHARNAILKGLS 180
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y YRL
Sbjct: 181 PKENREIPPLKYDYAYRL 198
[204][TOP]
>UniRef100_A8I3M9 Dihydrouridine synthase TIM-barrel protein n=1 Tax=Azorhizobium
caulinodans ORS 571 RepID=A8I3M9_AZOC5
Length = 338
Score = 139 bits (350), Expect = 1e-31
Identities = 79/144 (54%), Positives = 94/144 (65%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q++HPVV+QLGGS+P LA A + +GY EINLN GCPS V G G FGA LM+ P++
Sbjct: 58 QAEHPVVVQLGGSNPALLAEAARICADFGYDEINLNVGCPSDRVKG-GNFGACLMRDPAL 116
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M A S+P+TVKCR+GVD D E+L D V AAG R VHAR A L
Sbjct: 117 VAECVAAMRAAV--SIPVTVKCRIGVDDQDVEEALDALADAVLAAGCAR-LIVHARKAWL 173
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAA 520
GLSP +NR IPPL Y V+RL A
Sbjct: 174 KGLSPKENREIPPLDYDRVHRLKA 197
[205][TOP]
>UniRef100_A7MSY6 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC
BAA-1116 RepID=A7MSY6_VIBHB
Length = 300
Score = 139 bits (350), Expect = 1e-31
Identities = 72/142 (50%), Positives = 89/142 (62%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HP+ LQLGGS+P +LA L+ GY EINLN GCPS V G FGA LM P +
Sbjct: 29 EEEHPLALQLGGSNPADLATCAKLAQERGYDEINLNVGCPSDRVQN-GRFGACLMAEPQL 87
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M + D +P+TVK R+G+D DSYE L FV VS GG F++HAR A L
Sbjct: 88 VADCVAAMKDVVD--VPVTVKTRIGIDDQDSYEFLTDFVSIVSEKGGCEQFTIHARKAWL 145
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y+L
Sbjct: 146 SGLSPKENREIPPLDYPRAYQL 167
[206][TOP]
>UniRef100_Q2BMB0 NIFR3-like protein n=1 Tax=Neptuniibacter caesariensis
RepID=Q2BMB0_9GAMM
Length = 328
Score = 139 bits (350), Expect = 1e-31
Identities = 73/145 (50%), Positives = 96/145 (66%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ + PV LQLGGS+PE+LA ++ YGY E+NLN GCPS V GA LM P +
Sbjct: 61 REEQPVALQLGGSNPEDLAQCTKMAEDYGYNEVNLNVGCPSDRVQ-NNMIGACLMAHPQL 119
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
V+E +M A D +P+TVK R G+D DSYE L++FVDTV + G + F +HAR AIL
Sbjct: 120 VSECLEKMQAAVD--IPVTVKHRQGIDDMDSYEELVQFVDTVRQS-GCKVFIIHARKAIL 176
Query: 449 GGLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR IPPL+Y +VY++ E
Sbjct: 177 QGLSPKENRDIPPLKYEWVYQIKQE 201
[207][TOP]
>UniRef100_B6XDC8 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens
DSM 30120 RepID=B6XDC8_9ENTR
Length = 341
Score = 139 bits (350), Expect = 1e-31
Identities = 74/142 (52%), Positives = 89/142 (62%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HPV LQLGGSDP LA L+ GY EINLN GCPS V G FGA LM +
Sbjct: 72 EEEHPVSLQLGGSDPVALAQCAKLAEERGYDEINLNVGCPSDRVQN-GRFGACLMADAQL 130
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ + M + S+P+TVK R+G+D DSYE L F+DTVS G F +HAR A L
Sbjct: 131 VADCVKAMRDVV--SIPVTVKTRIGIDEQDSYEFLCEFIDTVSTKGDCEMFIIHARKAWL 188
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 189 SGLSPKENREIPPLDYPRVYQL 210
[208][TOP]
>UniRef100_B5WS85 TIM-barrel protein, yjbN family n=1 Tax=Burkholderia sp. H160
RepID=B5WS85_9BURK
Length = 317
Score = 139 bits (350), Expect = 1e-31
Identities = 74/138 (53%), Positives = 94/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P++LA + L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 49 PVALQLGGSEPDDLARSARLGEQWGYDEINLNCGCPSERVR-RGAFGACLMNEPQLVADC 107
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M + S+P+TVK R+GVDT + Y + FV T++ A G F VHAR AIL GLS
Sbjct: 108 VKAMRDVV--SVPVTVKHRIGVDTVEEYGFVRDFVGTIAQA-GCEVFIVHARNAILKGLS 164
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y Y+L
Sbjct: 165 PKENREIPPLKYDYAYQL 182
[209][TOP]
>UniRef100_A3TSD6 TRNA-dihydrouridine synthase A n=1 Tax=Oceanicola batsensis
HTCC2597 RepID=A3TSD6_9RHOB
Length = 314
Score = 139 bits (350), Expect = 1e-31
Identities = 85/162 (52%), Positives = 97/162 (59%)
Frame = +2
Query: 29 VGAVASARDGVPPPPSASPPQSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCP 208
V A A R G SP +HPV LQLGGSDPEELAAA L GY EINLNCGCP
Sbjct: 27 VTAPALVRGGAVHLLDFSP--REHPVALQLGGSDPEELAAAARLGQAAGYDEINLNCGCP 84
Query: 209 SPTVAGKGAFGAALMKTPSVVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVD 388
S V G FGA LM+ P VA+ M EA + + +TVKCR+GVD + E L F+
Sbjct: 85 SDRVQ-SGVFGAVLMRDPGRVADCVAAMREAVE--VEVTVKCRIGVDDQNPEEVLPEFLS 141
Query: 389 TVSAAGGVRHFSVHARAAILGGLSPAQNRSIPPLRYGYVYRL 514
V AAG R F +HAR A L GLSP +NR IPPL Y V R+
Sbjct: 142 RVGAAGCGR-FIIHARKAWLQGLSPKENRDIPPLDYDLVQRM 182
[210][TOP]
>UniRef100_C1MIG4 Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MIG4_9CHLO
Length = 252
Score = 139 bits (350), Expect = 1e-31
Identities = 78/149 (52%), Positives = 95/149 (63%), Gaps = 5/149 (3%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVAL-SLPYGYTEINLNCGCPSPTVAGKG----AFGAALMK 256
S+HP+ +QLGGS P LA A + YGY E+NLN GCPS V K FGA LM+
Sbjct: 56 SEHPLTVQLGGSSPGRLARAAEICDAAYGYDEVNLNAGCPSAKVTSKSDAEKCFGAVLMR 115
Query: 257 TPSVVAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHAR 436
P +V E RRM EA D +P+T+K RLG D+Y + FV V GV HF VHAR
Sbjct: 116 DPELVGECLRRMREAVD--VPVTLKHRLG----DNYAYVSDFVQRVHELSGVTHFIVHAR 169
Query: 437 AAILGGLSPAQNRSIPPLRYGYVYRLAAE 523
AA+LGGLSPA NRSIPPLR+ V+ LA++
Sbjct: 170 AAVLGGLSPAANRSIPPLRHREVHALASD 198
[211][TOP]
>UniRef100_Q8EAJ0 tRNA-dihydrouridine synthase A n=1 Tax=Shewanella oneidensis
RepID=DUSA_SHEON
Length = 335
Score = 139 bits (350), Expect = 1e-31
Identities = 75/142 (52%), Positives = 90/142 (63%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HP+ LQLGGS+P ELA L+ GY E+NLN GCPS V G FGA LM P +
Sbjct: 64 QEEHPLALQLGGSNPVELARCAKLAAERGYDEVNLNVGCPSDRVQ-NGRFGACLMAEPEL 122
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M + D +P+TVK R+G+D DSYE L F+DTV A G F +HAR A L
Sbjct: 123 VAECVDAMKQVVD--IPVTVKTRIGIDEQDSYEFLTHFIDTVMAK-GCGEFIIHARKAWL 179
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 180 QGLSPKENREIPPLDYDRVYQL 201
[212][TOP]
>UniRef100_UPI0001AEB9C4 tRNA-dihydrouridine synthase A n=1 Tax=Alteromonas macleodii ATCC
27126 RepID=UPI0001AEB9C4
Length = 309
Score = 139 bits (349), Expect = 2e-31
Identities = 74/142 (52%), Positives = 91/142 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HPV +QLGGS+P ++A LS GY E+N+N GCPS V G+FGA LM P V
Sbjct: 29 QEEHPVAVQLGGSEPSDMAKCAELSQARGYDEVNINVGCPSDRVK-NGSFGACLMAQPEV 87
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA + M A D +P+TVKCR+G+D D E RF+DTV+ A G F VHAR A L
Sbjct: 88 VASCVKAMQAAVD--IPVTVKCRIGIDDMDEDEDFARFIDTVADA-GCDTFIVHARKAWL 144
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y V+RL
Sbjct: 145 QGLSPKENREIPPLNYPRVHRL 166
[213][TOP]
>UniRef100_Q0HF56 TIM-barrel protein, yjbN family n=1 Tax=Shewanella sp. MR-4
RepID=Q0HF56_SHESM
Length = 335
Score = 139 bits (349), Expect = 2e-31
Identities = 75/142 (52%), Positives = 90/142 (63%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HP+ LQLGGS+P ELA L+ GY E+NLN GCPS V G FGA LM P +
Sbjct: 64 QEEHPLALQLGGSNPAELARCAKLAAERGYDEVNLNVGCPSDRVQ-NGRFGACLMAEPEL 122
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M + D +P+TVK R+G+D DSYE L F+DTV A G F +HAR A L
Sbjct: 123 VAECVDAMKQVVD--IPVTVKTRIGIDEQDSYEFLTYFIDTVMAK-GCGEFIIHARKAWL 179
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 180 QGLSPKENREIPPLDYDRVYQL 201
[214][TOP]
>UniRef100_B4RYT5 tRNA-dihydrouridine synthase A n=1 Tax=Alteromonas macleodii 'Deep
ecotype' RepID=B4RYT5_ALTMD
Length = 348
Score = 139 bits (349), Expect = 2e-31
Identities = 73/142 (51%), Positives = 91/142 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HP+ +QLGGSDP ++A LS GY E+N+N GCPS V G+FGA LM P V
Sbjct: 68 KEEHPIAVQLGGSDPSDMAKCAELSQERGYDEVNINVGCPSDRVK-NGSFGACLMAQPEV 126
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA + M A D +P+TVKCR+G+D D E RF+DTV+ A G F VHAR A L
Sbjct: 127 VANCVKAMQSAVD--IPVTVKCRIGIDDMDEDEDFARFIDTVADA-GCDTFIVHARKAWL 183
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y V+RL
Sbjct: 184 QGLSPKENREIPPLNYPRVHRL 205
[215][TOP]
>UniRef100_B2JKA0 TIM-barrel protein, yjbN family n=1 Tax=Burkholderia phymatum
STM815 RepID=B2JKA0_BURP8
Length = 333
Score = 139 bits (349), Expect = 2e-31
Identities = 76/138 (55%), Positives = 94/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+ E+LA + L +GY EINLNCGCPS V +GAFGA LMK P +VA+
Sbjct: 65 PVALQLGGSEREDLARSAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMKEPELVADC 123
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD + Y + FV T++ A G F VHAR AIL GLS
Sbjct: 124 VKAMRDAV--SVPVTVKHRIGVDDVEDYAFVRDFVGTIADA-GCDVFIVHARNAILKGLS 180
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y YRL
Sbjct: 181 PKENREIPPLKYDYAYRL 198
[216][TOP]
>UniRef100_C2HTJ7 tRNA dihydrouridine synthase A n=1 Tax=Vibrio cholerae bv. albensis
VL426 RepID=C2HTJ7_VIBCH
Length = 327
Score = 139 bits (349), Expect = 2e-31
Identities = 71/142 (50%), Positives = 89/142 (62%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HP LQ GGS+P++LA L+ GY EINLN GCPS V G FGA LM P +
Sbjct: 55 QEEHPAALQFGGSNPKDLAHCAKLAQERGYDEINLNVGCPSDRVQN-GRFGACLMGEPDL 113
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M D +P+TVK R+G+D DSYE L +F+ TV+ GG F++HAR A L
Sbjct: 114 VAECVAAMRAVVD--IPVTVKTRIGIDDQDSYEFLTQFIATVAEKGGCEQFTIHARKAWL 171
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y++
Sbjct: 172 SGLSPKENREIPPLDYPRAYQI 193
[217][TOP]
>UniRef100_Q3J6Z4 Dihydrouridine synthase TIM-barrel protein yjbN n=2
Tax=Nitrosococcus oceani RepID=Q3J6Z4_NITOC
Length = 337
Score = 139 bits (349), Expect = 2e-31
Identities = 74/139 (53%), Positives = 92/139 (66%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+S+HP+ LQLGGS PEELA ++ YG+ E+NLN GCPS V G FGA LM P +
Sbjct: 71 KSEHPLALQLGGSHPEELALCAQMAEDYGFDEVNLNVGCPSNRVQ-SGRFGACLMAEPEL 129
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE MA+A +P+TVK R+G+D DSYE+L F+ TV+ A G R F +HAR A L
Sbjct: 130 VAECVAAMAQAT--QIPVTVKTRIGIDEQDSYEALDHFISTVAQA-GCRTFIIHARKAWL 186
Query: 449 GGLSPAQNRSIPPLRYGYV 505
GLSP +NR PPLRY V
Sbjct: 187 QGLSPKENREKPPLRYDVV 205
[218][TOP]
>UniRef100_B3WIX8 tRNA-dihydrouridine synthase A n=2 Tax=Escherichia coli
RepID=B3WIX8_ECOLX
Length = 345
Score = 139 bits (349), Expect = 2e-31
Identities = 73/142 (51%), Positives = 90/142 (63%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HPV LQLGGSDP LA L+ +GY EINLN GCPS V G FGA LM +
Sbjct: 76 EEEHPVALQLGGSDPAALAQCAKLAEAHGYDEINLNVGCPSDRVQN-GMFGACLMGNAQL 134
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ + M + S+P+TVK R+G+D DSYE L F++TVS G F +HAR A L
Sbjct: 135 VADCVKAMRDVV--SIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWL 192
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 193 SGLSPKENREIPPLDYPRVYQL 214
[219][TOP]
>UniRef100_B3IGP1 tRNA-dihydrouridine synthase A n=1 Tax=Escherichia coli E110019
RepID=B3IGP1_ECOLX
Length = 339
Score = 139 bits (349), Expect = 2e-31
Identities = 74/142 (52%), Positives = 90/142 (63%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HPVVLQLGGSDP LA L+ GY EINLN GCPS V G FGA LM +
Sbjct: 70 EEEHPVVLQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQN-GMFGACLMGNTQL 128
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ + M + S+P+TVK R+G+D DSYE L F++TVS G F +HAR A L
Sbjct: 129 VADCVKAMRDVV--SIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWL 186
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 187 SGLSPKENREIPPLDYPRVYQL 208
[220][TOP]
>UniRef100_UPI00018443A6 hypothetical protein PROVRUST_02770 n=1 Tax=Providencia rustigianii
DSM 4541 RepID=UPI00018443A6
Length = 341
Score = 138 bits (348), Expect = 2e-31
Identities = 74/142 (52%), Positives = 89/142 (62%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HPV LQLGGSDP LA L+ GY EINLN GCPS V G FGA LM +
Sbjct: 72 EEEHPVSLQLGGSDPAALAQCAKLAQERGYDEINLNVGCPSDRVQN-GRFGACLMADAQL 130
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ + M + S+P+TVK R+G+D DSYE L F+DTVS G F +HAR A L
Sbjct: 131 VADCVKAMRDVV--SIPVTVKTRIGIDEQDSYEFLCDFIDTVSTKGDCDTFVIHARKAWL 188
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 189 SGLSPKENREIPPLDYPRVYQL 210
[221][TOP]
>UniRef100_UPI00018263CB hypothetical protein ENTCAN_00297 n=1 Tax=Enterobacter cancerogenus
ATCC 35316 RepID=UPI00018263CB
Length = 313
Score = 138 bits (348), Expect = 2e-31
Identities = 74/140 (52%), Positives = 89/140 (63%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HPV LQLGGSDP LA L+ GY EINLN GCPS V G FGA LM +VA
Sbjct: 46 EHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQN-GMFGACLMGNAQLVA 104
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
++ + M + S+P+TVK R+G+D DSYE L F+DTVS G F +HAR A L G
Sbjct: 105 DSIKAMRDVV--SIPVTVKTRIGIDDQDSYEFLCDFIDTVSGKGECEMFIIHARKAWLSG 162
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
LSP +NR IPPL Y VY+L
Sbjct: 163 LSPKENREIPPLDYPRVYQL 182
[222][TOP]
>UniRef100_Q2KYJ4 tRNA-dihydrouridine synthase A n=1 Tax=Bordetella avium 197N
RepID=Q2KYJ4_BORA1
Length = 327
Score = 138 bits (348), Expect = 2e-31
Identities = 74/142 (52%), Positives = 95/142 (66%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+++HPV LQLGGS+P+ LAAA L +GY E+NLNCGCPS V +GAFGA LM P +
Sbjct: 57 ETEHPVALQLGGSEPDALAAAARLGRQWGYDEVNLNCGCPSERVQ-RGAFGACLMAEPDL 115
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ + M +A D +P+TVK RLG+D ++SY + FV + G R F VHAR A+L
Sbjct: 116 VADCMKAMQDAVD--IPVTVKHRLGLDYNESYAFVRDFVGKIYDT-GCRVFVVHARNAVL 172
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP NR IPPLRY +L
Sbjct: 173 KGLSPKDNREIPPLRYDVAAQL 194
[223][TOP]
>UniRef100_Q13ZK1 Dihydrouridine synthase TIM-barrel, yjbN n=1 Tax=Burkholderia
xenovorans LB400 RepID=Q13ZK1_BURXL
Length = 333
Score = 138 bits (348), Expect = 2e-31
Identities = 74/138 (53%), Positives = 94/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P++LA + L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 65 PVALQLGGSEPDDLARSAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADC 123
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD + Y + FV T++ A G F VHAR AIL GLS
Sbjct: 124 VKAMRDAV--SVPVTVKHRIGVDAVEEYGFVRDFVGTIADA-GCNVFIVHARNAILKGLS 180
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y Y+L
Sbjct: 181 PKENREIPPLKYDYAYQL 198
[224][TOP]
>UniRef100_B2T3K2 TIM-barrel protein, yjbN family n=1 Tax=Burkholderia phytofirmans
PsJN RepID=B2T3K2_BURPP
Length = 333
Score = 138 bits (348), Expect = 2e-31
Identities = 74/138 (53%), Positives = 94/138 (68%)
Frame = +2
Query: 101 PVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVAEA 280
PV LQLGGS+P++LA + L +GY EINLNCGCPS V +GAFGA LM P +VA+
Sbjct: 65 PVALQLGGSEPDDLARSAKLGEQWGYDEINLNCGCPSERVQ-RGAFGACLMNEPQLVADC 123
Query: 281 TRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGGLS 460
+ M +A S+P+TVK R+GVD + Y + FV T++ A G F VHAR AIL GLS
Sbjct: 124 VKAMRDAV--SVPVTVKHRIGVDAVEEYGFVRDFVGTIAEA-GCNVFIVHARNAILKGLS 180
Query: 461 PAQNRSIPPLRYGYVYRL 514
P +NR IPPL+Y Y Y+L
Sbjct: 181 PKENREIPPLKYEYAYQL 198
[225][TOP]
>UniRef100_C9YAM1 tRNA-dihydrouridine synthase A n=1 Tax=Curvibacter putative
symbiont of Hydra magnipapillata RepID=C9YAM1_9BURK
Length = 370
Score = 138 bits (348), Expect = 2e-31
Identities = 74/140 (52%), Positives = 94/140 (67%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HPV LQLGGS+P +LA A L +GY EIN+NCGCPS V +GAFGA LM +VA
Sbjct: 99 EHPVALQLGGSEPADLARAAKLGQDWGYDEININCGCPSERVQ-RGAFGACLMNEAPLVA 157
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ + M +A D +P+TVK R+G+D ++SY + FV TV+ A G F HAR A L G
Sbjct: 158 DCVKSMVDAVD--VPVTVKHRIGIDKEESYSFVRDFVGTVADA-GCNVFIAHARNAWLKG 214
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
LSP +NR IPPLRY VY+L
Sbjct: 215 LSPKENREIPPLRYELVYQL 234
[226][TOP]
>UniRef100_C4GGJ1 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147
RepID=C4GGJ1_9NEIS
Length = 367
Score = 138 bits (348), Expect = 2e-31
Identities = 76/142 (53%), Positives = 90/142 (63%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+S+HP+ LQLGGSDP +LA A Y Y EINLNCGCPSP V KGAFGA LM +
Sbjct: 95 ESEHPIALQLGGSDPAQLAQAAKKVAQYQYDEINLNCGCPSPRVQ-KGAFGACLMNDVGL 153
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M +AA ITVK R+GVD Y + FV T+ VR + VHAR A L
Sbjct: 154 VADCLNAMQQAAP-DCEITVKHRIGVDKQTEYRIVRDFVGTLREKTPVRTYIVHARNAWL 212
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL+Y YVY+L
Sbjct: 213 DGLSPKENRDIPPLKYHYVYQL 234
[227][TOP]
>UniRef100_A9D188 TIM-barrel protein, yjbN family n=1 Tax=Shewanella benthica KT99
RepID=A9D188_9GAMM
Length = 310
Score = 138 bits (348), Expect = 2e-31
Identities = 77/140 (55%), Positives = 90/140 (64%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
++P+ LQLGGS+P++LA L+ GY EINLN GCPS V G FGA LM P +VA
Sbjct: 46 ENPLALQLGGSNPQDLATCAKLAAERGYDEINLNVGCPSDRVQ-SGRFGACLMADPKLVA 104
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
E M + D +P+TVK R+G+D DSYE L FVDTVS G F VHAR A L G
Sbjct: 105 ECVTAMKQVVD--IPVTVKTRIGIDDQDSYEFLTEFVDTVSDV-GCDTFIVHARKAWLQG 161
Query: 455 LSPAQNRSIPPLRYGYVYRL 514
LSP QNR IPPL Y VYRL
Sbjct: 162 LSPKQNREIPPLDYQRVYRL 181
[228][TOP]
>UniRef100_Q7VZ52 Putative uncharacterized protein n=1 Tax=Bordetella pertussis
RepID=Q7VZ52_BORPE
Length = 337
Score = 138 bits (347), Expect = 3e-31
Identities = 75/141 (53%), Positives = 94/141 (66%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++HPV LQLGGS+P+ LA A L +GY EINLNCGCPS V +GAFGA LM P++V
Sbjct: 58 AEHPVALQLGGSEPDALAQAARLGRQWGYDEINLNCGCPSERVQ-RGAFGACLMAEPALV 116
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ + M +A D +P+TVK RLG+D D+SY + FV + G R F VHAR A+L
Sbjct: 117 ADCMKAMQDAVD--IPVTVKHRLGLDYDESYGFVRDFVGQIYDT-GCRVFVVHARNAVLK 173
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSP NR IPPLRY +L
Sbjct: 174 GLSPKDNREIPPLRYDVARQL 194
[229][TOP]
>UniRef100_A4Y3F8 TIM-barrel protein, yjbN family n=1 Tax=Shewanella putrefaciens
CN-32 RepID=A4Y3F8_SHEPC
Length = 343
Score = 138 bits (347), Expect = 3e-31
Identities = 73/142 (51%), Positives = 92/142 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HP+ LQLGGS+P++LA L+ GY E+NLN GCPS V G FGA LM P +
Sbjct: 73 QEEHPLALQLGGSNPQDLARCAKLAAERGYDEVNLNVGCPSDRVQ-NGRFGACLMAEPDL 131
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M + D +P+TVK R+G+D DSYE L F+D V+A G F++HAR A L
Sbjct: 132 VAECVDAMKQVVD--IPVTVKTRIGIDEQDSYEFLTYFIDIVNAK-GCTDFTIHARKAWL 188
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 189 QGLSPKENREIPPLDYERVYQL 210
[230][TOP]
>UniRef100_A1RNI1 TIM-barrel protein, yjbN family n=1 Tax=Shewanella sp. W3-18-1
RepID=A1RNI1_SHESW
Length = 343
Score = 138 bits (347), Expect = 3e-31
Identities = 73/142 (51%), Positives = 92/142 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HP+ LQLGGS+P++LA L+ GY E+NLN GCPS V G FGA LM P +
Sbjct: 73 QEEHPLALQLGGSNPQDLARCAKLAAERGYDEVNLNVGCPSDRVQ-NGRFGACLMAEPEL 131
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M + D +P+TVK R+G+D DSYE L F+D V+A G F++HAR A L
Sbjct: 132 VAECVDAMKQVVD--IPVTVKTRIGIDEQDSYEFLTYFIDIVNAK-GCTDFTIHARKAWL 188
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 189 QGLSPKENREIPPLDYERVYQL 210
[231][TOP]
>UniRef100_D0D7M9 tRNA-dihydrouridine synthase A n=1 Tax=Citreicella sp. SE45
RepID=D0D7M9_9RHOB
Length = 372
Score = 138 bits (347), Expect = 3e-31
Identities = 75/142 (52%), Positives = 91/142 (64%)
Frame = +2
Query: 95 QHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVVA 274
+HPV LQLGGSDP+ELA A L GY +I+LNCGCPS V G FGA LMKTP +VA
Sbjct: 104 EHPVALQLGGSDPDELAQAAKLGGAAGYDQIDLNCGCPSDRVQ-SGTFGAVLMKTPELVA 162
Query: 275 EATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILGG 454
+ M EA ++ +TVKCR+GVD E L F+D V A G R ++HAR A L G
Sbjct: 163 DCVAAMQEAT--AVEVTVKCRIGVDDQKPREVLPAFIDKVRGA-GCRRIAIHARKAWLQG 219
Query: 455 LSPAQNRSIPPLRYGYVYRLAA 520
LSP +NR IPPL Y V+ + A
Sbjct: 220 LSPKENREIPPLDYAIVHEMKA 241
[232][TOP]
>UniRef100_C9P9C7 tRNA-dihydrouridine synthase n=1 Tax=Vibrio furnissii CIP 102972
RepID=C9P9C7_VIBFU
Length = 316
Score = 138 bits (347), Expect = 3e-31
Identities = 72/142 (50%), Positives = 88/142 (61%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HP+ LQLGGS+P +LA L+ GY EINLN GCPS V G FGA LM P +
Sbjct: 44 EEEHPLALQLGGSNPVDLAHCAKLAQERGYDEINLNVGCPSDRVQN-GRFGACLMAEPEL 102
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ M D +P+TVK R+G+D DSYE L FV VS GG F++HAR A L
Sbjct: 103 VAQCVAAMKAVVD--IPVTVKTRIGIDDQDSYEFLTHFVTVVSEQGGCEQFTIHARKAWL 160
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y Y+L
Sbjct: 161 SGLSPKENREIPPLDYPRAYQL 182
[233][TOP]
>UniRef100_C3X927 tRNA-dihydrouridine synthase A n=1 Tax=Oxalobacter formigenes
OXCC13 RepID=C3X927_OXAFO
Length = 330
Score = 138 bits (347), Expect = 3e-31
Identities = 73/142 (51%), Positives = 96/142 (67%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HP+ LQLGGS+P +LA L +GY EINLNCGCPS V KGAFGA LM ++
Sbjct: 60 EEEHPIALQLGGSEPGDLAQCARLGEKWGYDEINLNCGCPSERVQ-KGAFGACLMSESTL 118
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA + M +A S+ +TVK R+G+D ++SY+ + F+ V+ A G + F VHAR AIL
Sbjct: 119 VANCVKAMQDAV--SIDVTVKHRIGIDKNESYDFVRDFIGEVAEA-GCKTFIVHARNAIL 175
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPLRY VY+L
Sbjct: 176 KGLSPRENREIPPLRYEVVYQL 197
[234][TOP]
>UniRef100_A2V558 TIM-barrel protein, yjbN family n=1 Tax=Shewanella putrefaciens 200
RepID=A2V558_SHEPU
Length = 343
Score = 138 bits (347), Expect = 3e-31
Identities = 73/142 (51%), Positives = 92/142 (64%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
Q +HP+ LQLGGS+P++LA L+ GY E+NLN GCPS V G FGA LM P +
Sbjct: 73 QEEHPLALQLGGSNPQDLARCAKLAAERGYDEVNLNVGCPSDRVQ-NGRFGACLMAEPEL 131
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VAE M + D +P+TVK R+G+D DSYE L F+D V+A G F++HAR A L
Sbjct: 132 VAECVDAMKQVVD--IPVTVKTRIGIDEQDSYEFLTYFIDIVNAK-GCTDFTIHARKAWL 188
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 189 QGLSPKENREIPPLDYERVYQL 210
[235][TOP]
>UniRef100_UPI000197C35A hypothetical protein PROVRETT_02900 n=1 Tax=Providencia rettgeri
DSM 1131 RepID=UPI000197C35A
Length = 288
Score = 137 bits (346), Expect = 3e-31
Identities = 73/142 (51%), Positives = 89/142 (62%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HPV LQLGGSDP LA L+ GY EINLN GCPS V G FGA LM +
Sbjct: 19 EEEHPVALQLGGSDPAALAQCAKLAQERGYDEINLNVGCPSDRVQN-GRFGACLMGDAQL 77
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ + M + S+P+TVK R+G+D DSY L F++TVS GG F +HAR A L
Sbjct: 78 VADCVKAMQDVV--SIPVTVKTRIGIDEQDSYAFLCDFIETVSDKGGCEMFIIHARKAWL 135
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 136 SGLSPKENREIPPLDYPRVYQL 157
[236][TOP]
>UniRef100_Q7WKK3 Putative uncharacterized protein n=1 Tax=Bordetella bronchiseptica
RepID=Q7WKK3_BORBR
Length = 337
Score = 137 bits (346), Expect = 3e-31
Identities = 75/141 (53%), Positives = 93/141 (65%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++HPV LQLGGS+P+ LA A L +GY EINLNCGCPS V +GAFGA LM P +V
Sbjct: 58 AEHPVALQLGGSEPDALAQAARLGRQWGYDEINLNCGCPSERVQ-RGAFGACLMAEPGLV 116
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ + M +A D +P+TVK RLG+D D+SY + FV + G R F VHAR A+L
Sbjct: 117 ADCMKAMQDAVD--IPVTVKHRLGLDYDESYGFVRDFVGQIYDT-GCRVFVVHARNAVLK 173
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSP NR IPPLRY +L
Sbjct: 174 GLSPKDNREIPPLRYDVARQL 194
[237][TOP]
>UniRef100_Q7W958 Putative uncharacterized protein n=1 Tax=Bordetella parapertussis
RepID=Q7W958_BORPA
Length = 337
Score = 137 bits (346), Expect = 3e-31
Identities = 75/141 (53%), Positives = 93/141 (65%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++HPV LQLGGS+P+ LA A L +GY EINLNCGCPS V +GAFGA LM P +V
Sbjct: 58 AEHPVALQLGGSEPDALAQAARLGRQWGYDEINLNCGCPSERVQ-RGAFGACLMAEPGLV 116
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ + M +A D +P+TVK RLG+D D+SY + FV + G R F VHAR A+L
Sbjct: 117 ADCMKAMQDAVD--IPVTVKHRLGLDYDESYGFVRDFVGQIYDT-GCRVFVVHARNAVLK 173
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSP NR IPPLRY +L
Sbjct: 174 GLSPKDNREIPPLRYDVARQL 194
[238][TOP]
>UniRef100_Q1LLV8 TIM-barrel protein, yjbN family n=1 Tax=Ralstonia metallidurans
CH34 RepID=Q1LLV8_RALME
Length = 351
Score = 137 bits (346), Expect = 3e-31
Identities = 76/144 (52%), Positives = 94/144 (65%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++ PV LQLGGS+P +LA A L +GY EINLNCGCPS V +GAFGA LM P +V
Sbjct: 75 AEQPVALQLGGSEPVDLAQAAKLGEQWGYKEINLNCGCPSERVQ-RGAFGACLMAEPQLV 133
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ R M + S+P+TVK R+G+DT + Y + FV T++ A G F VHAR AIL
Sbjct: 134 ADCVRAMRDVV--SVPVTVKHRIGIDTIEHYGFVRDFVGTIAEA-GCDIFIVHARNAILK 190
Query: 452 GLSPAQNRSIPPLRYGYVYRLAAE 523
GLSP +NR IPPLRY Y L E
Sbjct: 191 GLSPKENREIPPLRYEVAYELKRE 214
[239][TOP]
>UniRef100_Q0A8B0 TIM-barrel protein, yjbN family n=1 Tax=Alkalilimnicola ehrlichii
MLHE-1 RepID=Q0A8B0_ALHEH
Length = 343
Score = 137 bits (346), Expect = 3e-31
Identities = 77/141 (54%), Positives = 93/141 (65%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++ P+ +Q GGSDPE+LA L+ + Y E+NLN GCPS V GAFGA LM P V
Sbjct: 71 AERPLAVQFGGSDPEQLAHCARLAEAWSYDEVNLNVGCPSDRVQA-GAFGACLMADPGRV 129
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ MAE+ LP+TVK R+GVD DSY+ L FVD V+AAG R F VHAR A L
Sbjct: 130 ADCVAAMAEST--RLPVTVKHRIGVDHLDSYDHLTGFVDQVAAAG-CRTFYVHARKAWLQ 186
Query: 452 GLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR +PPL YG VYRL
Sbjct: 187 GLSPKENREVPPLDYGRVYRL 207
[240][TOP]
>UniRef100_B5R7U2 Putative uncharacterized protein yjbN n=1 Tax=Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91
RepID=B5R7U2_SALG2
Length = 332
Score = 137 bits (346), Expect = 3e-31
Identities = 73/142 (51%), Positives = 89/142 (62%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HPV LQLGGSDP +LA L+ GY EINLN GCPS V G FGA LM +
Sbjct: 63 EEEHPVALQLGGSDPAQLAHCAKLAEARGYDEINLNVGCPSDRVQN-GMFGACLMGNAQL 121
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ + M + S+P+TVK R+G+D DSY L F+DTVS G F +HAR A L
Sbjct: 122 VADCVKAMRDVV--SIPVTVKTRIGIDDQDSYAFLCDFIDTVSGRGECEMFIIHARKAWL 179
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 180 SGLSPKENREIPPLDYPRVYQL 201
[241][TOP]
>UniRef100_B5FQR7 tRNA-dihydrouridine synthase A n=2 Tax=Salmonella enterica subsp.
enterica RepID=B5FQR7_SALDC
Length = 332
Score = 137 bits (346), Expect = 3e-31
Identities = 73/142 (51%), Positives = 89/142 (62%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HPV LQLGGSDP +LA L+ GY EINLN GCPS V G FGA LM +
Sbjct: 63 EEEHPVALQLGGSDPAQLAHCAKLAEARGYDEINLNVGCPSDRVQN-GMFGACLMGNAQL 121
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ + M + S+P+TVK R+G+D DSY L F+DTVS G F +HAR A L
Sbjct: 122 VADCVKAMRDVV--SIPVTVKTRIGIDDQDSYAFLCDFIDTVSGRGECEMFIIHARKAWL 179
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 180 SGLSPKENREIPPLDYPRVYQL 201
[242][TOP]
>UniRef100_B5F1R2 tRNA-dihydrouridine synthase A n=1 Tax=Salmonella enterica subsp.
enterica serovar Agona str. SL483 RepID=B5F1R2_SALA4
Length = 332
Score = 137 bits (346), Expect = 3e-31
Identities = 73/142 (51%), Positives = 89/142 (62%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HPV LQLGGSDP +LA L+ GY EINLN GCPS V G FGA LM +
Sbjct: 63 EEEHPVALQLGGSDPAQLAHCAKLAEARGYDEINLNVGCPSDRVQN-GMFGACLMGNAQL 121
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ + M + S+P+TVK R+G+D DSY L F+DTVS G F +HAR A L
Sbjct: 122 VADCVKAMRDVV--SIPVTVKTRIGIDDQDSYAFLCDFIDTVSGQGECEMFIIHARKAWL 179
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 180 SGLSPKENREIPPLDYPRVYQL 201
[243][TOP]
>UniRef100_B4T1T8 tRNA-dihydrouridine synthase A n=1 Tax=Salmonella enterica subsp.
enterica serovar Newport str. SL254 RepID=B4T1T8_SALNS
Length = 332
Score = 137 bits (346), Expect = 3e-31
Identities = 73/142 (51%), Positives = 89/142 (62%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HPV LQLGGSDP +LA L+ GY EINLN GCPS V G FGA LM +
Sbjct: 63 EEEHPVALQLGGSDPAQLAHCAKLAEARGYDEINLNVGCPSDRVQN-GMFGACLMGNAQL 121
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ + M + S+P+TVK R+G+D DSY L F+DTVS G F +HAR A L
Sbjct: 122 VADCVKAMRDVV--SIPVTVKTRIGIDDQDSYAFLCDFIDTVSGRGECEMFIIHARKAWL 179
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 180 SGLSPKENREIPPLDYPRVYQL 201
[244][TOP]
>UniRef100_A6T0Y3 tRNA-dihydrouridine synthase n=1 Tax=Janthinobacterium sp.
Marseille RepID=A6T0Y3_JANMA
Length = 344
Score = 137 bits (346), Expect = 3e-31
Identities = 73/142 (51%), Positives = 95/142 (66%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HPV LQLGGS+P +LA + L +GY E+NLNCGCPS V KGAFGA LM +
Sbjct: 67 EEEHPVALQLGGSEPADLAKSAKLGEQWGYDEVNLNCGCPSERVQ-KGAFGACLMNETGL 125
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ + M +A S+ +TVK R+G+D SY+ + FV T++ A G F VHAR AIL
Sbjct: 126 VADCVKAMRDAV--SIDVTVKHRIGIDDITSYDFVRDFVGTIADA-GCNTFIVHARNAIL 182
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPLRY + Y+L
Sbjct: 183 KGLSPKENREIPPLRYEFAYQL 204
[245][TOP]
>UniRef100_A4W5G2 TIM-barrel protein, yjbN family n=1 Tax=Enterobacter sp. 638
RepID=A4W5G2_ENT38
Length = 331
Score = 137 bits (346), Expect = 3e-31
Identities = 73/142 (51%), Positives = 89/142 (62%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HPV LQLGGSDP LA L+ GY EINLN GCPS V G FGA LM +
Sbjct: 62 EEEHPVALQLGGSDPAALAECAKLAEARGYDEINLNVGCPSDRVQN-GMFGACLMGNAQL 120
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ + M + S+P+TVK R+G+D DSYE L F+DTV+ G F +HAR A L
Sbjct: 121 VADGIKAMRDVV--SIPVTVKTRIGIDDQDSYEFLCDFIDTVAGKGECETFIIHARKAWL 178
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 179 SGLSPKENREIPPLDYPRVYQL 200
[246][TOP]
>UniRef100_A1WT92 TIM-barrel protein, yjbN family n=1 Tax=Halorhodospira halophila
SL1 RepID=A1WT92_HALHL
Length = 328
Score = 137 bits (346), Expect = 3e-31
Identities = 78/143 (54%), Positives = 95/143 (66%)
Frame = +2
Query: 92 SQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSVV 271
++HPV +Q GGSDP+ELA A L+ +GY E+NLN GCPS V G FGA LM PS V
Sbjct: 61 AEHPVAVQFGGSDPQELAYAARLAEQWGYDEVNLNVGCPSDRVQ-SGRFGACLMLEPSRV 119
Query: 272 AEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAILG 451
A+ M A+ +LP+TVK R+GVD DS L FV+TV+AA G R F VHAR A L
Sbjct: 120 ADCVAAM--RAETNLPVTVKSRIGVDEHDSESFLDAFVETVAAA-GCRTFIVHARKAWLA 176
Query: 452 GLSPAQNRSIPPLRYGYVYRLAA 520
GLSP +NR +PPL Y V+RL A
Sbjct: 177 GLSPKENREVPPLDYQRVHRLKA 199
[247][TOP]
>UniRef100_C1MFH7 tRNA-dihydrouridine synthase A n=1 Tax=Citrobacter sp. 30_2
RepID=C1MFH7_9ENTR
Length = 331
Score = 137 bits (346), Expect = 3e-31
Identities = 73/142 (51%), Positives = 89/142 (62%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HPV LQLGGSDP LA L+ GY EINLN GCPS V G FGA LM +
Sbjct: 62 EEEHPVALQLGGSDPAALAQCAKLAEQRGYDEINLNVGCPSDRVQN-GMFGACLMGNAQL 120
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ + M + S+P+TVK R+G+D DSYE L F++TVS G F +HAR A L
Sbjct: 121 VADCVKAMRDVV--SIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWL 178
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 179 SGLSPKENREIPPLDYDRVYQL 200
[248][TOP]
>UniRef100_B5Q4K8 tRNA-dihydrouridine synthase A n=1 Tax=Salmonella enterica subsp.
enterica serovar Virchow str. SL491 RepID=B5Q4K8_SALVI
Length = 332
Score = 137 bits (346), Expect = 3e-31
Identities = 73/142 (51%), Positives = 89/142 (62%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HPV LQLGGSDP +LA L+ GY EINLN GCPS V G FGA LM +
Sbjct: 63 EEEHPVALQLGGSDPAQLAHCAKLAEARGYDEINLNVGCPSDRVQN-GMFGACLMGNAQL 121
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ + M + S+P+TVK R+G+D DSY L F+DTVS G F +HAR A L
Sbjct: 122 VADCVKAMRDVV--SIPVTVKTRIGIDDQDSYAFLCDFIDTVSGQGECEMFIIHARKAWL 179
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 180 SGLSPKENREIPPLDYPRVYQL 201
[249][TOP]
>UniRef100_B5PY80 tRNA-dihydrouridine synthase A n=1 Tax=Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066 RepID=B5PY80_SALHA
Length = 332
Score = 137 bits (346), Expect = 3e-31
Identities = 73/142 (51%), Positives = 89/142 (62%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HPV LQLGGSDP +LA L+ GY EINLN GCPS V G FGA LM +
Sbjct: 63 EEEHPVALQLGGSDPAQLAHCAKLAEARGYDEINLNVGCPSDRVQN-GMFGACLMGNAQL 121
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ + M + S+P+TVK R+G+D DSY L F+DTVS G F +HAR A L
Sbjct: 122 VADCVKAMRDVV--SIPVTVKTRIGIDDQDSYAFLCDFIDTVSGRGECEMFIIHARKAWL 179
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 180 SGLSPKENREIPPLDYPRVYQL 201
[250][TOP]
>UniRef100_B4TDM6 tRNA-dihydrouridine synthase A n=2 Tax=Salmonella enterica subsp.
enterica serovar Heidelberg RepID=B4TDM6_SALHS
Length = 332
Score = 137 bits (346), Expect = 3e-31
Identities = 73/142 (51%), Positives = 89/142 (62%)
Frame = +2
Query: 89 QSQHPVVLQLGGSDPEELAAAVALSLPYGYTEINLNCGCPSPTVAGKGAFGAALMKTPSV 268
+ +HPV LQLGGSDP +LA L+ GY EINLN GCPS V G FGA LM +
Sbjct: 63 EEEHPVALQLGGSDPAQLAHCAKLAEARGYDEINLNVGCPSDRVQN-GMFGACLMGNAQL 121
Query: 269 VAEATRRMAEAADYSLPITVKCRLGVDTDDSYESLLRFVDTVSAAGGVRHFSVHARAAIL 448
VA+ + M + S+P+TVK R+G+D DSY L F+DTVS G F +HAR A L
Sbjct: 122 VADCVKAMRDVV--SIPVTVKTRIGIDDQDSYAFLCDFIDTVSGQGECEMFIIHARKAWL 179
Query: 449 GGLSPAQNRSIPPLRYGYVYRL 514
GLSP +NR IPPL Y VY+L
Sbjct: 180 SGLSPKENREIPPLDYPRVYQL 201