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[1][TOP]
>UniRef100_B1XJ16 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. PCC 7002
RepID=B1XJ16_SYNP2
Length = 326
Score = 172 bits (435), Expect = 2e-41
Identities = 90/174 (51%), Positives = 121/174 (69%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R +A+EDLVG ELPLKF++VD+D +LV+SHR A +M LE G VV G+VR +
Sbjct: 149 HISTR-QAKEDLVGQELPLKFLEVDEDRNRLVLSHRRALVERKMNGLEVGEVVVGSVRGI 207
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISHDH+ +V E+K +++ D ++GRISLSTK L
Sbjct: 208 KPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFQVNDELKVMIIDLDAERGRISLSTKQL 267
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASSVADDIVSSLDIASLDD 522
E EPGDM+ + VF AE+ A +Y ++ E AA +V D + S D+ + D+
Sbjct: 268 EPEPGDMLKNRDLVFEKAEEMAEKYREKLRAE-AAGLTVEDQVDESEDLDTDDE 320
[2][TOP]
>UniRef100_P46228 30S ribosomal protein S1 n=2 Tax=Synechococcus elongatus
RepID=RS1_SYNP6
Length = 307
Score = 171 bits (433), Expect = 3e-41
Identities = 84/152 (55%), Positives = 114/152 (75%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ A+EDLVG ELPLKF++VD+D +LV+SHR A +M LE G VV G VR +
Sbjct: 149 HISTRK-AKEDLVGEELPLKFLEVDEDRNRLVLSHRRALVERKMNRLEVGEVVVGAVRGI 207
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISHDH++ +V + EVK +++ D ++GRISLSTK L
Sbjct: 208 KPYGAFIDIGGVSGLLHISEISHDHIETPHSVFNVNDEVKVMIIDLDAERGRISLSTKQL 267
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+ +P V+ AE+ AA+Y +++++
Sbjct: 268 EPEPGDMVRNPEVVYEKAEEMAAQYREKLKQQ 299
[3][TOP]
>UniRef100_Q3AWE8 SSU ribosomal protein S1P n=1 Tax=Synechococcus sp. CC9902
RepID=Q3AWE8_SYNS9
Length = 367
Score = 168 bits (425), Expect = 3e-40
Identities = 83/152 (54%), Positives = 113/152 (74%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +E+LV LPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 204 HISTRKP-KEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGTVRGI 262
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ +VL+ ++K +++ D ++GRISLSTK L
Sbjct: 263 KPYGAFIDIGGVSGLLHISEISHEHIETPHSVLNVNDQMKVMIIDLDAERGRISLSTKAL 322
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+TDP VF AE+ AARY ++E+
Sbjct: 323 EPEPGDMLTDPQKVFEKAEEMAARYKQMLQEQ 354
[4][TOP]
>UniRef100_Q2JJ89 Ribosomal protein S1 n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13)
RepID=Q2JJ89_SYNJB
Length = 322
Score = 168 bits (425), Expect = 3e-40
Identities = 88/173 (50%), Positives = 120/173 (69%), Gaps = 2/173 (1%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +E+LVG ELPLKF++VD+D +LV+SHR A +M LE G VV GTVR +
Sbjct: 147 HISTRKP-KEELVGEELPLKFLEVDEDRNRLVLSHRRALVERKMNKLEVGEVVVGTVRGI 205
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISHDHV +V + EVK +++ D ++GRISLSTK L
Sbjct: 206 KPYGAFIDIGGVSGLLHISEISHDHVDTPHSVFNVNDEVKVMIIDLDAERGRISLSTKQL 265
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARV--EEERAAASSVADDIVSSLDIAS 513
E PGDM+ DP V+ AE+ AA+Y ++ ++ AA + + + L+ A+
Sbjct: 266 EPNPGDMIRDPKLVYEKAEEMAAKYREQLLAAKQGQAAEAPPEVVEEELEYAA 318
[5][TOP]
>UniRef100_Q3AME0 RNA binding S1 n=1 Tax=Synechococcus sp. CC9605 RepID=Q3AME0_SYNSC
Length = 386
Score = 167 bits (424), Expect = 3e-40
Identities = 87/169 (51%), Positives = 120/169 (71%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +E+LV LPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 223 HISTRKP-KEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGTVRGI 281
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ +VL+ ++K +++ D ++GRISLSTK L
Sbjct: 282 KPYGAFIDIGGVSGLLHISEISHEHIETPHSVLNVNDQMKVMIIDLDAERGRISLSTKAL 341
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASSVADDIVSSLDI 507
E EPGDM+TDP VF AE+ AARY + E+ + +D +SS+ I
Sbjct: 342 EPEPGDMLTDPQKVFEKAEEMAARYKQMLMEQ----AEEGEDPISSMMI 386
[6][TOP]
>UniRef100_A5GJ26 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GJ26_SYNPW
Length = 367
Score = 167 bits (424), Expect = 3e-40
Identities = 84/152 (55%), Positives = 113/152 (74%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ A+E+LV LPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 204 HISTRK-AKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGTVRGI 262
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ +VL+ ++K +++ D ++GRISLSTK L
Sbjct: 263 KPYGAFIDIGGVSGLLHISEISHEHIETPHSVLNVNDQMKVMIIDLDAERGRISLSTKAL 322
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+TDP VF AE+ AARY + E+
Sbjct: 323 EPEPGDMLTDPQKVFDKAEEMAARYKQMLLEQ 354
[7][TOP]
>UniRef100_D0CJU6 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CJU6_9SYNE
Length = 363
Score = 167 bits (424), Expect = 3e-40
Identities = 87/169 (51%), Positives = 120/169 (71%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +E+LV LPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 200 HISTRKP-KEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGTVRGI 258
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ +VL+ ++K +++ D ++GRISLSTK L
Sbjct: 259 KPYGAFIDIGGVSGLLHISEISHEHIETPHSVLNVNDQMKVMIIDLDAERGRISLSTKAL 318
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASSVADDIVSSLDI 507
E EPGDM+TDP VF AE+ AARY + E+ + +D +SS+ I
Sbjct: 319 EPEPGDMLTDPQKVFEKAEEMAARYKQMLMEQ----AEEGEDPISSMMI 363
[8][TOP]
>UniRef100_A4RTM3 Plastid ribosomal protein S1, imported to chloroplast, small
ribosomal subunit n=1 Tax=Ostreococcus lucimarinus
CCE9901 RepID=A4RTM3_OSTLU
Length = 339
Score = 167 bits (424), Expect = 3e-40
Identities = 83/159 (52%), Positives = 111/159 (69%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HI VR +E+L+G +LP KFI+VD+++ +LV+SHRLA LE G VV G V++V
Sbjct: 178 HIGVRTLNREELIGQQLPFKFIEVDEEKNRLVLSHRLATDMVSAEGLEVGDVVEGMVQAV 237
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAFVD+GG SGLLHISQISH+ + +E VLSPG +K VM++D +KGR+SLSTK L
Sbjct: 238 KPYGAFVDVGGQSGLLHISQISHERIVAVENVLSPGDRIKVLVMSKDAEKGRLSLSTKKL 297
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASSV 477
E GDM+ +PAAVF AED ++ +++ SV
Sbjct: 298 EQNHGDMLRNPAAVFETAEDMGRQFREKMQAAEGVVMSV 336
[9][TOP]
>UniRef100_Q8DHB3 30S ribosomal protein S1 n=1 Tax=Thermosynechococcus elongatus BP-1
RepID=Q8DHB3_THEEB
Length = 330
Score = 167 bits (423), Expect = 5e-40
Identities = 86/175 (49%), Positives = 122/175 (69%), Gaps = 1/175 (0%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R +E+LVG ELPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 148 HISTRVN-KEELVGEELPLKFLEVDEERNRLVLSHRRALVERKMNKLEVGEVVVGTVRGI 206
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISHDH+ +V + +VK +++ D ++GRISLSTK L
Sbjct: 207 KPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVNDQVKVMIIDLDAERGRISLSTKQL 266
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLAR-VEEERAAASSVADDIVSSLDIASLDD 522
E EPGDM+ +P V+ AE+ A RY + +++++ AA ++ + + A+ DD
Sbjct: 267 EPEPGDMVKNPQLVYEKAEEMAERYRQQLLQQQQQAAGETPEEGMEDIPEATEDD 321
[10][TOP]
>UniRef100_B5IPJ0 Ribosomal protein S1 n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5IPJ0_9CHRO
Length = 351
Score = 167 bits (423), Expect = 5e-40
Identities = 84/152 (55%), Positives = 112/152 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ A+E+LV LPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 189 HISTRK-AKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVLGTVRGI 247
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ VL+ ++K +++ D ++GRISLSTK L
Sbjct: 248 KPYGAFIDIGGVSGLLHISEISHEHIETPHTVLNVNDQMKVMIIDLDAERGRISLSTKAL 307
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+TDP VF AE+ AARY + E+
Sbjct: 308 EPEPGDMLTDPQKVFDKAEEMAARYKQMLLEQ 339
[11][TOP]
>UniRef100_B1X539 30S ribosomal protein S1 n=1 Tax=Paulinella chromatophora
RepID=B1X539_PAUCH
Length = 330
Score = 167 bits (423), Expect = 5e-40
Identities = 84/152 (55%), Positives = 112/152 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ A+E+LV LPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 166 HISTRK-AKEELVSDFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGI 224
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ VL+ ++K +++ D ++GRISLSTK L
Sbjct: 225 KPYGAFIDIGGVSGLLHISEISHEHIETPHTVLNVNDQMKVMIIDLDAERGRISLSTKAL 284
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+TDP VF AE+ AARY + E+
Sbjct: 285 EPEPGDMLTDPQKVFDKAEEMAARYKQMLLEQ 316
[12][TOP]
>UniRef100_Q7NLY2 30S ribosomal protein S1 n=1 Tax=Gloeobacter violaceus
RepID=Q7NLY2_GLOVI
Length = 320
Score = 167 bits (422), Expect = 6e-40
Identities = 89/171 (52%), Positives = 118/171 (69%), Gaps = 3/171 (1%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
H+S R E +E+L+G ELPLKF++VD++ +LV+SHR A RM LE G VV G VR +
Sbjct: 151 HLSTR-EPKEELIGEELPLKFLEVDEERNRLVLSHRRALVERRMNKLEAGQVVIGRVRGI 209
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISHDH++ +V + G EVK V++ D ++GRISLSTK L
Sbjct: 210 KPYGAFIDIGGVSGLLHISEISHDHIETPHSVFNVGDEVKVMVIDLDAERGRISLSTKQL 269
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASSVA---DDIVSSLD 504
E PG M D AVF AE A +Y AR+ E A + V + +V+++D
Sbjct: 270 EETPGAMTQDKQAVFDNAEVMAEKYRARMAAEAAGSEPVEEFDEAVVAAID 320
[13][TOP]
>UniRef100_Q31CL6 SSU ribosomal protein S1P n=1 Tax=Prochlorococcus marinus str. MIT
9312 RepID=Q31CL6_PROM9
Length = 366
Score = 167 bits (422), Expect = 6e-40
Identities = 86/164 (52%), Positives = 117/164 (71%), Gaps = 6/164 (3%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS RR ++DL G LPLKF++VD++ +LV+SHR A +M LE G VV G+V+ +
Sbjct: 201 HISARR-VKDDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVKGI 259
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ VL+ ++K +++ D ++GRISLSTK L
Sbjct: 260 KPYGAFIDIGGVSGLLHISEISHEHIETPHNVLNVSDQMKVMIIDLDSERGRISLSTKAL 319
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARV------EEERAAASS 474
E EPGDM+TDP VF+ AE+ AA+Y + EE A+ASS
Sbjct: 320 EPEPGDMLTDPQKVFSKAEEMAAKYKQMLFEQTDEAEETASASS 363
[14][TOP]
>UniRef100_A3YUT0 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. WH 5701
RepID=A3YUT0_9SYNE
Length = 361
Score = 167 bits (422), Expect = 6e-40
Identities = 84/152 (55%), Positives = 111/152 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +EDLV LPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 199 HISTRKP-KEDLVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGI 257
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ VL+ ++K +++ D ++GRISLSTK L
Sbjct: 258 KPYGAFIDIGGVSGLLHISEISHEHIETPHTVLNVNDQMKVMIIDLDAERGRISLSTKAL 317
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+TDP VF AE+ AARY + E+
Sbjct: 318 EPEPGDMLTDPQKVFDKAEEMAARYKQMLLEQ 349
[15][TOP]
>UniRef100_Q2JS77 Ribosomal protein S1 n=1 Tax=Synechococcus sp. JA-3-3Ab
RepID=Q2JS77_SYNJA
Length = 323
Score = 166 bits (421), Expect = 8e-40
Identities = 87/162 (53%), Positives = 114/162 (70%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +E+LVG ELPLKF++VD+D +LV+SHR A +M LE G VV GTVR +
Sbjct: 148 HISSRKP-KEELVGEELPLKFLEVDEDRNRLVLSHRRALVERKMNKLEVGEVVVGTVRGI 206
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+HV +V + EVK +++ D ++GRISLSTK L
Sbjct: 207 KPYGAFIDIGGVSGLLHISEISHEHVDTPHSVFNVNDEVKVMIIDLDAERGRISLSTKQL 266
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASSVADD 486
E PGDM+ DP V+ AE+ AA+Y E+ RAA ++
Sbjct: 267 EPNPGDMLRDPKLVYEKAEEMAAKYR---EQLRAAKQGQVEE 305
[16][TOP]
>UniRef100_Q0ICR5 Ribosomal protein S1 n=1 Tax=Synechococcus sp. CC9311
RepID=Q0ICR5_SYNS3
Length = 305
Score = 166 bits (421), Expect = 8e-40
Identities = 87/163 (53%), Positives = 116/163 (71%), Gaps = 4/163 (2%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +E+LV LPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 142 HISTRKP-KEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGI 200
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ +VL+ ++K +++ D ++GRISLSTK L
Sbjct: 201 KPYGAFIDIGGVSGLLHISEISHEHIETPHSVLNVNDQMKVMIIDLDAERGRISLSTKAL 260
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARY----LARVEEERAAASSV 477
E EPGDM+TDP VF AE+ AARY L + EE SS+
Sbjct: 261 EPEPGDMLTDPQKVFDKAEEMAARYKQMLLEQAEEGEEPLSSM 303
[17][TOP]
>UniRef100_B8HVN0 RNA binding S1 domain protein n=1 Tax=Cyanothece sp. PCC 7425
RepID=B8HVN0_CYAP4
Length = 321
Score = 166 bits (421), Expect = 8e-40
Identities = 88/174 (50%), Positives = 122/174 (70%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R +EDLVG ELPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 149 HISTR-VTKEDLVGEELPLKFLEVDEERNRLVLSHRRALVERKMNKLEVGEVVIGTVRGI 207
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISHDH+ +V + EVK +++ D ++GRISLSTK L
Sbjct: 208 KPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVNDEVKVMIIDLDAERGRISLSTKQL 267
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASSVADDIVSSLDIASLDD 522
E E GDM+ +P V+ AE+ AA+Y ++ + AA ++ A+ V + +AS ++
Sbjct: 268 EPEAGDMVKNPQLVYEKAEEMAAKYREQMFAQ-AAPTASAEVEVEEIPVASEEE 320
[18][TOP]
>UniRef100_B0JTB0 30S ribosomal protein S1 n=1 Tax=Microcystis aeruginosa NIES-843
RepID=B0JTB0_MICAN
Length = 330
Score = 166 bits (421), Expect = 8e-40
Identities = 87/165 (52%), Positives = 113/165 (68%), Gaps = 2/165 (1%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R EA+EDLVG ELPLKF++VD+D +LV+SHR A +M L G VV G+VR +
Sbjct: 149 HISTR-EAKEDLVGQELPLKFLEVDEDRNRLVLSHRRALVERKMNGLAVGQVVIGSVRGI 207
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISHDH+ V + E+K +++ D ++GRISLSTK L
Sbjct: 208 KPYGAFIDIGGVSGLLHISEISHDHIDTPHTVFNVNDELKVMIIDLDAERGRISLSTKQL 267
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLAR--VEEERAAASSVADDI 489
E EPGDM+ + VF AE+ A +Y + E E S V ++I
Sbjct: 268 EPEPGDMLKNRPLVFEKAEEMAIKYREKRLAEAEGRTVSEVVEEI 312
[19][TOP]
>UniRef100_A8YI09 Genome sequencing data, contig C316 n=1 Tax=Microcystis aeruginosa
PCC 7806 RepID=A8YI09_MICAE
Length = 330
Score = 166 bits (421), Expect = 8e-40
Identities = 87/165 (52%), Positives = 113/165 (68%), Gaps = 2/165 (1%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R EA+EDLVG ELPLKF++VD+D +LV+SHR A +M L G VV G+VR +
Sbjct: 149 HISTR-EAKEDLVGQELPLKFLEVDEDRNRLVLSHRRALVERKMNGLAVGQVVIGSVRGI 207
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISHDH+ V + E+K +++ D ++GRISLSTK L
Sbjct: 208 KPYGAFIDIGGVSGLLHISEISHDHIDTPHTVFNVNDELKVMIIDLDAERGRISLSTKQL 267
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLAR--VEEERAAASSVADDI 489
E EPGDM+ + VF AE+ A +Y + E E S V ++I
Sbjct: 268 EPEPGDMLKNRPLVFEKAEEMAIKYREKRLAEAEGRTVSEVVEEI 312
[20][TOP]
>UniRef100_Q7U4S8 30S ribosomal protein S1, homolog A n=1 Tax=Synechococcus sp. WH
8102 RepID=Q7U4S8_SYNPX
Length = 367
Score = 166 bits (420), Expect = 1e-39
Identities = 83/152 (54%), Positives = 112/152 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +E+LV LPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 204 HISTRKP-KEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGTVRGI 262
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ +VL+ ++K +++ D ++GRISLSTK L
Sbjct: 263 KPYGAFIDIGGVSGLLHISEISHEHIETPHSVLNVNDQMKVMIIDLDAERGRISLSTKAL 322
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+TDP VF AE+ AARY + E+
Sbjct: 323 EPEPGDMLTDPQKVFEKAEEMAARYKQMLLEQ 354
[21][TOP]
>UniRef100_A5GR09 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. RCC307
RepID=A5GR09_SYNR3
Length = 367
Score = 166 bits (420), Expect = 1e-39
Identities = 83/152 (54%), Positives = 112/152 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +E+LV LPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 206 HISTRKP-KEELVAEFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVLGTVRGI 264
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ +VL+ ++K +++ D ++GRISLSTK L
Sbjct: 265 KPYGAFIDIGGVSGLLHISEISHEHIETPHSVLNVNDQMKVMIIDLDAERGRISLSTKAL 324
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+TDP VF AE+ AARY + E+
Sbjct: 325 EPEPGDMLTDPQKVFDNAEEMAARYKQMLMEQ 356
[22][TOP]
>UniRef100_Q05Z68 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. BL107
RepID=Q05Z68_9SYNE
Length = 367
Score = 166 bits (420), Expect = 1e-39
Identities = 83/152 (54%), Positives = 112/152 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +E+LV LPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 204 HISTRKP-KEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGTVRGI 262
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ +VL+ ++K +++ D ++GRISLSTK L
Sbjct: 263 KPYGAFIDIGGVSGLLHISEISHEHIETPHSVLNVNDQMKVMIIDLDAERGRISLSTKAL 322
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+TDP VF AE+ AARY + E+
Sbjct: 323 EPEPGDMLTDPQKVFEKAEEMAARYKQMLLEQ 354
[23][TOP]
>UniRef100_A4CSD5 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. WH 7805
RepID=A4CSD5_SYNPV
Length = 368
Score = 166 bits (420), Expect = 1e-39
Identities = 83/152 (54%), Positives = 112/152 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +E+LV LPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 205 HISTRKP-KEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGTVRGI 263
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ +VL+ ++K +++ D ++GRISLSTK L
Sbjct: 264 KPYGAFIDIGGVSGLLHISEISHEHIETPHSVLNVNDQMKVMIIDLDAERGRISLSTKAL 323
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+TDP VF AE+ AARY + E+
Sbjct: 324 EPEPGDMLTDPQKVFEKAEEMAARYKQMLLEQ 355
[24][TOP]
>UniRef100_A3Z943 RNA binding S1 n=1 Tax=Synechococcus sp. RS9917 RepID=A3Z943_9SYNE
Length = 369
Score = 166 bits (420), Expect = 1e-39
Identities = 83/152 (54%), Positives = 112/152 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +E+LV LPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 207 HISTRKP-KEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGI 265
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ +VL+ ++K +++ D ++GRISLSTK L
Sbjct: 266 KPYGAFIDIGGVSGLLHISEISHEHIETPHSVLNVNDQMKVMIIDLDAERGRISLSTKAL 325
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+TDP VF AE+ AARY + E+
Sbjct: 326 EPEPGDMLTDPQKVFEKAEEMAARYKQMLLEQ 357
[25][TOP]
>UniRef100_Q46H55 SSU ribosomal protein S1P n=1 Tax=Prochlorococcus marinus str.
NATL2A RepID=Q46H55_PROMT
Length = 369
Score = 166 bits (419), Expect = 1e-39
Identities = 83/152 (54%), Positives = 112/152 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ A+E+LV LPLKF++VD++ +LV+SHR A +M LE G VV G VR +
Sbjct: 206 HISTRK-AKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGAVRGI 264
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ +VL+ ++K +++ D ++GRISLSTK L
Sbjct: 265 KPYGAFIDIGGVSGLLHISEISHEHIETPHSVLNVNDQMKVMIIDLDAERGRISLSTKAL 324
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+TDP VF AE+ AARY + E+
Sbjct: 325 EPEPGDMLTDPQKVFDKAEEMAARYKQMLLEQ 356
[26][TOP]
>UniRef100_A2C0F6 30S ribosomal protein S1, protein A n=1 Tax=Prochlorococcus marinus
str. NATL1A RepID=A2C0F6_PROM1
Length = 369
Score = 166 bits (419), Expect = 1e-39
Identities = 83/152 (54%), Positives = 112/152 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ A+E+LV LPLKF++VD++ +LV+SHR A +M LE G VV G VR +
Sbjct: 206 HISTRK-AKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGAVRGI 264
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ +VL+ ++K +++ D ++GRISLSTK L
Sbjct: 265 KPYGAFIDIGGVSGLLHISEISHEHIETPHSVLNVNDQMKVMIIDLDAERGRISLSTKAL 324
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+TDP VF AE+ AARY + E+
Sbjct: 325 EPEPGDMLTDPQKVFDKAEEMAARYKQMLLEQ 356
[27][TOP]
>UniRef100_Q05Q21 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. RS9916
RepID=Q05Q21_9SYNE
Length = 359
Score = 166 bits (419), Expect = 1e-39
Identities = 83/152 (54%), Positives = 112/152 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +E+LV LPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 197 HISTRKP-KEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGI 255
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ +VL+ ++K +++ D ++GRISLSTK L
Sbjct: 256 KPYGAFIDIGGVSGLLHISEISHEHIETPHSVLNVNDQMKVMIIDLDAERGRISLSTKAL 315
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+TDP VF AE+ AARY + E+
Sbjct: 316 EPEPGDMLTDPQKVFDKAEEMAARYKQMLLEQ 347
[28][TOP]
>UniRef100_Q7VDM5 Ribosomal protein S1 n=1 Tax=Prochlorococcus marinus
RepID=Q7VDM5_PROMA
Length = 367
Score = 165 bits (418), Expect = 2e-39
Identities = 82/152 (53%), Positives = 112/152 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ A+E+LV LPLKF++VD++ +LV+SHR A +M LE G VV G VR +
Sbjct: 204 HISTRK-AKEELVAEYLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGAVRGI 262
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ +VL+ ++K +++ D ++GRISLSTK L
Sbjct: 263 KPYGAFIDIGGVSGLLHISEISHEHIETPHSVLNVNDQMKVMIIDLDAERGRISLSTKAL 322
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+TDP VF AE+ AA+Y + E+
Sbjct: 323 EPEPGDMLTDPQKVFDKAEEMAAKYKEMLLEQ 354
[29][TOP]
>UniRef100_B7KFG6 RNA binding S1 domain protein n=1 Tax=Cyanothece sp. PCC 7424
RepID=B7KFG6_CYAP7
Length = 328
Score = 165 bits (418), Expect = 2e-39
Identities = 85/163 (52%), Positives = 116/163 (71%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R EA+EDLVG +LPLKF++VD+D +LV+SHR A +M LE G VV G+VR +
Sbjct: 150 HISTR-EAKEDLVGQDLPLKFLEVDEDRNRLVLSHRRALVERKMNGLEVGQVVIGSVRGI 208
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISHDH+ +V + E+K +++ D ++GRISLSTK L
Sbjct: 209 KPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVNDELKVMIIDLDAERGRISLSTKQL 268
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASSVADDI 489
E E GDM+ + VF AE+ AA+Y ++ E A + + ++I
Sbjct: 269 EPEAGDMLKNRDLVFEKAEEMAAKYREKMRAE-AEGTPIEEEI 310
[30][TOP]
>UniRef100_A2BPB3 30S ribosomal protein S1, protein A n=1 Tax=Prochlorococcus marinus
str. AS9601 RepID=A2BPB3_PROMS
Length = 363
Score = 165 bits (418), Expect = 2e-39
Identities = 82/160 (51%), Positives = 114/160 (71%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS RR ++DL G LPLKF++VD++ +LV+SHR A +M LE G VV G+V+ +
Sbjct: 198 HISARR-IKDDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVKGI 256
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ VL+ ++K +++ D ++GRISLSTK L
Sbjct: 257 KPYGAFIDIGGVSGLLHISEISHEHIETPHNVLNVSDQMKVMIIDLDSERGRISLSTKAL 316
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASSVA 480
E EPGDM+TDP VF+ AE+ AA+Y + E+ +A
Sbjct: 317 EPEPGDMLTDPQKVFSKAEEMAAKYKQMLFEQTDENEEIA 356
[31][TOP]
>UniRef100_Q7V2Y7 30S ribosomal protein S1, homolog A n=1 Tax=Prochlorococcus marinus
subsp. pastoris str. CCMP1986 RepID=Q7V2Y7_PROMP
Length = 363
Score = 165 bits (417), Expect = 2e-39
Identities = 83/167 (49%), Positives = 116/167 (69%), Gaps = 4/167 (2%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +EDL G LPLKF++VD++ +LV+SHR A +M LE G VV G+V+ +
Sbjct: 198 HISARK-IKEDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVIGSVKGI 256
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ VL+ ++K +++ D ++GRISLSTK L
Sbjct: 257 KPYGAFIDIGGVSGLLHISEISHEHIETPHNVLNVNDQMKVMIIDLDSERGRISLSTKAL 316
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARY----LARVEEERAAASSVADDI 489
E EPGDM+TDP VF AE+ AA+Y L + +E +A+ +
Sbjct: 317 EPEPGDMLTDPQKVFNKAEEMAAKYKQMLLEQTDENEEQTVEIAESV 363
[32][TOP]
>UniRef100_B5VXQ7 RNA binding S1 domain protein n=1 Tax=Arthrospira maxima CS-328
RepID=B5VXQ7_SPIMA
Length = 375
Score = 164 bits (416), Expect = 3e-39
Identities = 88/184 (47%), Positives = 121/184 (65%), Gaps = 9/184 (4%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +E+LV ELPLKF++VD+D +LV+SHR A +M LE G VV GTVR +
Sbjct: 149 HISTRKP-KEELVAEELPLKFLEVDEDRNRLVLSHRRALVERKMNRLEVGEVVIGTVRGI 207
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISHDH+ +V + EVK +++ D D+GRISLSTK L
Sbjct: 208 KPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVNDEVKVMIIDLDADRGRISLSTKQL 267
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEER---------AAASSVADDIVSSLDIAS 513
E EPG M+ +P V+ AE+ AA++ +++ E+ A + A+ S+ DI
Sbjct: 268 EPEPGAMVKNPEMVYEKAEEMAAKFREKMQAEQQGIPVVETAAETAETAEVAESTADIPP 327
Query: 514 LDDL 525
D+
Sbjct: 328 ATDV 331
[33][TOP]
>UniRef100_B2J9K3 RNA binding S1 domain protein n=1 Tax=Nostoc punctiforme PCC 73102
RepID=B2J9K3_NOSP7
Length = 375
Score = 164 bits (415), Expect = 4e-39
Identities = 87/178 (48%), Positives = 121/178 (67%), Gaps = 3/178 (1%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +E+LVG ELPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 149 HISTRKP-KEELVGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGI 207
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H+ +V + EVK +++ D ++GRISLSTK L
Sbjct: 208 KPYGAFIDIGGVSGLLHISEISHEHIDTPHSVFNVNDEVKVMIIDLDAERGRISLSTKQL 267
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARY---LARVEEERAAASSVADDIVSSLDIASLDDL 525
E EPGDM+ + V+ AE+ AA+Y L ++ AA + D+++ DI +L
Sbjct: 268 EPEPGDMIKNRDLVYDKAEEMAAKYREQLLAKQQGATAAPAAPADVLAEEDIPPATEL 325
[34][TOP]
>UniRef100_Q4C2K3 RNA binding S1 n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4C2K3_CROWT
Length = 345
Score = 164 bits (415), Expect = 4e-39
Identities = 86/170 (50%), Positives = 116/170 (68%), Gaps = 4/170 (2%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R EA+EDLVG +LPLKF++VD++ +LV+SHR A +M LE G VV G+VR +
Sbjct: 149 HISTR-EAKEDLVGEQLPLKFLEVDEERNRLVLSHRRALVERKMNGLEVGQVVIGSVRGI 207
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISHDH+ +V E+K +++ D ++GRISLSTK L
Sbjct: 208 KPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFGVNDELKVMIIDLDAERGRISLSTKQL 267
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARY----LARVEEERAAASSVADDIVSS 498
E E GDM+ + VF AE+ A +Y LA + + A V +D+ S+
Sbjct: 268 EPEAGDMLKNRDLVFEKAEEMAEKYRQKLLAEAQGKEAPTEEVLEDVPSA 317
[35][TOP]
>UniRef100_A9S0R6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9S0R6_PHYPA
Length = 389
Score = 164 bits (415), Expect = 4e-39
Identities = 81/154 (52%), Positives = 113/154 (73%)
Frame = +1
Query: 7 SVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKP 186
+V + E+L+ E+PLKF++VD++ +LV+S+R A A ++ G+VV GTV++VKP
Sbjct: 223 AVTQSNPEELLNKEIPLKFLEVDEERTRLVLSNRKATFAESQSAFGIGSVVVGTVQTVKP 282
Query: 187 YGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEA 366
YGAF+DIGGVSGLLHISQISHD + +E VLSPG ++K V++QDKD+GRISLSTK LE
Sbjct: 283 YGAFIDIGGVSGLLHISQISHDRLTSVETVLSPGDKLKVMVLSQDKDRGRISLSTKKLEP 342
Query: 367 EPGDMMTDPAAVFAVAEDTAARYLARVEEERAAA 468
PGDM+ +P V+ A++ A + RV + AAA
Sbjct: 343 TPGDMLRNPQLVYEKADEMAKTFRQRVAQAEAAA 376
[36][TOP]
>UniRef100_Q7V5A4 30S ribosomal protein S1, homolog A n=1 Tax=Prochlorococcus marinus
str. MIT 9313 RepID=Q7V5A4_PROMM
Length = 367
Score = 164 bits (414), Expect = 5e-39
Identities = 82/152 (53%), Positives = 111/152 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +E+LV LPLKF++VD++ +LV+SHR A +M LE G VV G VR +
Sbjct: 204 HISTRKP-KEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGAVRGI 262
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ +VL+ ++K +++ D ++GRISLSTK L
Sbjct: 263 KPYGAFIDIGGVSGLLHISEISHEHIETPHSVLNVNDQMKVMIIDLDAERGRISLSTKAL 322
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+TDP VF AE+ AARY + E+
Sbjct: 323 EPEPGDMLTDPQKVFDKAEEMAARYKQMLLEQ 354
[37][TOP]
>UniRef100_A8G2X3 Ribosomal protein S1 n=1 Tax=Prochlorococcus marinus str. MIT 9215
RepID=A8G2X3_PROM2
Length = 363
Score = 164 bits (414), Expect = 5e-39
Identities = 80/152 (52%), Positives = 112/152 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ ++DL G LPLKF++VD++ +LV+SHR A +M LE G VV G+V+ +
Sbjct: 198 HISARK-IKDDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVKGI 256
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ VL+ ++K +++ D ++GRISLSTK L
Sbjct: 257 KPYGAFIDIGGVSGLLHISEISHEHIETPHNVLNVNDQMKVMIIDLDSERGRISLSTKAL 316
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+TDP VF+ AE+ AA+Y + E+
Sbjct: 317 EPEPGDMLTDPQKVFSKAEEMAAKYKQMLFEQ 348
[38][TOP]
>UniRef100_A2CBU1 30S ribosomal protein S1, protein A n=1 Tax=Prochlorococcus marinus
str. MIT 9303 RepID=A2CBU1_PROM3
Length = 367
Score = 164 bits (414), Expect = 5e-39
Identities = 82/152 (53%), Positives = 111/152 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +E+LV LPLKF++VD++ +LV+SHR A +M LE G VV G VR +
Sbjct: 204 HISTRKP-KEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGAVRGI 262
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ +VL+ ++K +++ D ++GRISLSTK L
Sbjct: 263 KPYGAFIDIGGVSGLLHISEISHEHIETPHSVLNVNDQMKVMIIDLDAERGRISLSTKAL 322
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+TDP VF AE+ AARY + E+
Sbjct: 323 EPEPGDMLTDPQKVFDKAEEMAARYKQMLLEQ 354
[39][TOP]
>UniRef100_A2BUU3 30S ribosomal protein S1, protein A n=1 Tax=Prochlorococcus marinus
str. MIT 9515 RepID=A2BUU3_PROM5
Length = 363
Score = 164 bits (414), Expect = 5e-39
Identities = 84/166 (50%), Positives = 114/166 (68%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +EDL G LPLKF++VD++ +LV+SHR A +M LE G VV G+V+ +
Sbjct: 198 HISARK-IKEDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVKGI 256
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ VL+ ++K +++ D ++GRISLSTK L
Sbjct: 257 KPYGAFIDIGGVSGLLHISEISHEHIETPHNVLNVTDQMKVMIIDLDSERGRISLSTKAL 316
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASSVADDIVSS 498
E EPGDM+TDP VF AE+ AA+Y + E+ DI S
Sbjct: 317 EPEPGDMLTDPQKVFDKAEEMAAKYKQMLLEQTDENDEQTADIPES 362
[40][TOP]
>UniRef100_Q1PL50 30S ribosomal protein S1 A n=1 Tax=uncultured Prochlorococcus
marinus clone ASNC2150 RepID=Q1PL50_PROMA
Length = 363
Score = 164 bits (414), Expect = 5e-39
Identities = 80/152 (52%), Positives = 112/152 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ ++DL G LPLKF++VD++ +LV+SHR A +M LE G VV G+V+ +
Sbjct: 198 HISARK-IKDDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVKGI 256
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ VL+ ++K +++ D ++GRISLSTK L
Sbjct: 257 KPYGAFIDIGGVSGLLHISEISHEHIETPHNVLNVSDQMKVMIIDLDSERGRISLSTKAL 316
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+TDP VF+ AE+ AA+Y + E+
Sbjct: 317 EPEPGDMLTDPQKVFSKAEEMAAKYKQMLFEQ 348
[41][TOP]
>UniRef100_Q1PKI2 30S ribosomal protein S1 A n=1 Tax=uncultured Prochlorococcus
marinus clone ASNC729 RepID=Q1PKI2_PROMA
Length = 363
Score = 164 bits (414), Expect = 5e-39
Identities = 80/152 (52%), Positives = 112/152 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ ++DL G LPLKF++VD++ +LV+SHR A +M LE G VV G+V+ +
Sbjct: 198 HISARK-IKDDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVKGI 256
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ VL+ ++K +++ D ++GRISLSTK L
Sbjct: 257 KPYGAFIDIGGVSGLLHISEISHEHIETPHNVLNVNDQMKVMIIDLDSERGRISLSTKAL 316
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+TDP VF+ AE+ AA+Y + E+
Sbjct: 317 EPEPGDMLTDPQKVFSKAEEMAAKYKQMLFEQ 348
[42][TOP]
>UniRef100_C7QTB9 RNA binding S1 domain protein n=2 Tax=Cyanothece RepID=C7QTB9_CYAP0
Length = 331
Score = 164 bits (414), Expect = 5e-39
Identities = 87/171 (50%), Positives = 118/171 (69%), Gaps = 3/171 (1%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R EA+EDLVG ELPLKF++VD++ +LV+SHR A +M LE G VV G+VR +
Sbjct: 150 HISTR-EAKEDLVGEELPLKFLEVDEERNRLVLSHRRALVERKMNGLEVGQVVVGSVRGI 208
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISHDH+ +V + +K +++ D ++GRISLSTK L
Sbjct: 209 KPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVNDALKVMIIDLDAERGRISLSTKQL 268
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE---RAAASSVADDIVSSLD 504
E EPGDM+ + VF AE+ A +Y ++ E +AA +I S+L+
Sbjct: 269 EPEPGDMLKNRDLVFEKAEEMAEKYRQKLRAEAEGKAAPEEEELEIPSALE 319
[43][TOP]
>UniRef100_B9P029 30S ribosomal protein S1, protein A n=1 Tax=Prochlorococcus marinus
str. MIT 9202 RepID=B9P029_PROMA
Length = 363
Score = 164 bits (414), Expect = 5e-39
Identities = 80/152 (52%), Positives = 112/152 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ ++DL G LPLKF++VD++ +LV+SHR A +M LE G VV G+V+ +
Sbjct: 198 HISARK-IKDDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVKGI 256
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ VL+ ++K +++ D ++GRISLSTK L
Sbjct: 257 KPYGAFIDIGGVSGLLHISEISHEHIETPHNVLNVNDQMKVMIIDLDSERGRISLSTKAL 316
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+TDP VF+ AE+ AA+Y + E+
Sbjct: 317 EPEPGDMLTDPQKVFSKAEEMAAKYKQMLFEQ 348
[44][TOP]
>UniRef100_A0YXU1 30S ribosomal protein S1 n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0YXU1_9CYAN
Length = 414
Score = 164 bits (414), Expect = 5e-39
Identities = 86/172 (50%), Positives = 117/172 (68%), Gaps = 1/172 (0%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +E+LV ELPLKF++VD+D +LV+SHR A +M LE G VV GTVR +
Sbjct: 149 HISTRKP-KEELVSEELPLKFLEVDEDRNRLVLSHRRALVERKMNRLEVGEVVIGTVRGI 207
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISHDH+ +V + EVK +++ D D+GRISLSTK L
Sbjct: 208 KPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVNDEVKVMIIDLDADRGRISLSTKQL 267
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLAR-VEEERAAASSVADDIVSSLDIAS 513
E EPG M+ +P V+ AE+ AA++ + + E++ + + V DI S
Sbjct: 268 EPEPGAMVKNPELVYEKAEEMAAKFREKMLAEQQGTDAPTGEAEVEEADIPS 319
[45][TOP]
>UniRef100_A9BDW8 30S ribosomal protein S1-like protein A n=1 Tax=Prochlorococcus
marinus str. MIT 9211 RepID=A9BDW8_PROM4
Length = 371
Score = 163 bits (413), Expect = 7e-39
Identities = 81/152 (53%), Positives = 112/152 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ A+E+LV LPLKF++VD++ +LV+SHR A +M LE G VV G VR +
Sbjct: 208 HISTRK-AKEELVAEFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGAVRGI 266
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ +VL+ ++K +++ D ++GRISLSTK L
Sbjct: 267 KPYGAFIDIGGVSGLLHISEISHEHIETPHSVLNVNDQMKVMIIDLDAERGRISLSTKAL 326
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM++DP VF AE+ AA+Y + E+
Sbjct: 327 EPEPGDMLSDPQKVFDKAEEMAAKYKEMLLEQ 358
[46][TOP]
>UniRef100_A3PB35 30S ribosomal protein S1-like protein A n=1 Tax=Prochlorococcus
marinus str. MIT 9301 RepID=A3PB35_PROM0
Length = 363
Score = 163 bits (413), Expect = 7e-39
Identities = 80/152 (52%), Positives = 111/152 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ ++DL G LPLKF++VD++ +LV+SHR A +M LE G VV G V+ +
Sbjct: 198 HISARK-IKDDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGNVKGI 256
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H++ VL+ ++K +++ D ++GRISLSTK L
Sbjct: 257 KPYGAFIDIGGVSGLLHISEISHEHIETPHNVLNVNDQMKVMIIDLDSERGRISLSTKAL 316
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
E EPGDM+TDP VF+ AE+ AA+Y + E+
Sbjct: 317 EPEPGDMLTDPQKVFSKAEEMAAKYKQMLFEQ 348
[47][TOP]
>UniRef100_C1MYF2 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MYF2_9CHLO
Length = 343
Score = 163 bits (413), Expect = 7e-39
Identities = 82/160 (51%), Positives = 114/160 (71%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HI++R +EDL+G ++P+KF++VD+D+ +LV+S+RLA L G V G V++V
Sbjct: 157 HIAIRTPNREDLIGQKVPVKFLEVDEDKNRLVMSNRLATDVVSGEGLGVGDVCKGIVQAV 216
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAFVD+GGVSGLLHISQISHD + +E VLSPG E+K ++++D ++ R+SLSTK L
Sbjct: 217 KPYGAFVDVGGVSGLLHISQISHDRIVAVENVLSPGDELKVLILSKDAERSRLSLSTKKL 276
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASSVA 480
E PGDM+ +PA VF AE+ + RV ER AA+ A
Sbjct: 277 EPSPGDMLRNPALVFEKAEE-----MGRVFRERVAAAEAA 311
[48][TOP]
>UniRef100_B1X069 30S ribosomal protein S1 n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1X069_CYAA5
Length = 359
Score = 163 bits (412), Expect = 9e-39
Identities = 85/174 (48%), Positives = 116/174 (66%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R EA+EDLVG ELPLKF++VD++ +LV+SHR A +M LE G VV G+VR +
Sbjct: 172 HISTR-EAKEDLVGEELPLKFLEVDEERNRLVLSHRRALVERKMNGLEVGQVVIGSVRGI 230
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISHDH+ +V E+K +++ D ++GRISLSTK L
Sbjct: 231 KPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFGVNDELKVMIIDLDAERGRISLSTKQL 290
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASSVADDIVSSLDIASLDD 522
E E GDM+ + VF AE+ A +Y ++ E ++ + + AS +D
Sbjct: 291 EPEAGDMLKNRDLVFEKAEEMAEKYRQKLLAEAQGQEMPTEENLEEIPTASDND 344
[49][TOP]
>UniRef100_B0BZ86 30S ribosomal protein S1 n=1 Tax=Acaryochloris marina MBIC11017
RepID=B0BZ86_ACAM1
Length = 325
Score = 163 bits (412), Expect = 9e-39
Identities = 81/161 (50%), Positives = 112/161 (69%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R +EDL+G ELPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 149 HISTRA-TKEDLIGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGI 207
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISHDH+ +V + ++K +++ D ++GRISLSTK L
Sbjct: 208 KPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVNDDLKVMIIDLDAERGRISLSTKQL 267
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASSVAD 483
E EPGDM+ +P V+ AE+ A RY ++ ++ +D
Sbjct: 268 EPEPGDMVKNPQLVYDKAEEMAERYRQQMMAQQEGGQGDSD 308
[50][TOP]
>UniRef100_A9RWH7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RWH7_PHYPA
Length = 397
Score = 163 bits (412), Expect = 9e-39
Identities = 79/147 (53%), Positives = 110/147 (74%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
E+L+ E+PLKF++VD++ +LV+S+R A A ++ G+VV GTV++VKPYGAF+DI
Sbjct: 226 EELLNKEIPLKFLEVDEERTRLVLSNRKATFAENQSAFGIGSVVVGTVQTVKPYGAFIDI 285
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GGVSGLLHISQISHD + +E VLSPG ++K +++QDKD+GRISLSTK LE PGDM+
Sbjct: 286 GGVSGLLHISQISHDRLTTVETVLSPGDKLKVMILSQDKDRGRISLSTKKLEPTPGDMLR 345
Query: 388 DPAAVFAVAEDTAARYLARVEEERAAA 468
+P V+ A++ A + RV + AAA
Sbjct: 346 NPQLVYEKADEMAKTFRQRVAQAEAAA 372
[51][TOP]
>UniRef100_B8C8K9 RS1, ribosomal protein 1 (Fragment) n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8C8K9_THAPS
Length = 287
Score = 162 bits (411), Expect = 1e-38
Identities = 77/143 (53%), Positives = 106/143 (74%)
Frame = +1
Query: 16 REAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGA 195
R +DLVG LPLKF++V+Q++ KLVVS+R A +M L G V+ G V+++KPYGA
Sbjct: 145 RLPDDDLVGQTLPLKFLEVNQEDNKLVVSNRRAVVEEQMAELSRGDVIDGIVKALKPYGA 204
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
FV++GG+SGLLHISQIS D + D+E VL PG ++K +++ DK GRI+LSTK LE EPG
Sbjct: 205 FVEVGGMSGLLHISQISMDRITDLEQVLQPGQKIKCMIIDHDKVNGRIALSTKTLEPEPG 264
Query: 376 DMMTDPAAVFAVAEDTAARYLAR 444
DM+ DPA V+ +A++TA YL +
Sbjct: 265 DMIKDPARVYEMADETARVYLEK 287
[52][TOP]
>UniRef100_A3ITQ5 30S ribosomal protein S1 n=1 Tax=Cyanothece sp. CCY0110
RepID=A3ITQ5_9CHRO
Length = 365
Score = 162 bits (410), Expect = 1e-38
Identities = 85/171 (49%), Positives = 114/171 (66%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R EA+EDLVG ELPLKF++VD++ +LV+SHR A +M LE G VV G+VR +
Sbjct: 178 HISTR-EAKEDLVGEELPLKFLEVDEERNRLVLSHRRALVERKMNGLEVGQVVIGSVRGI 236
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISHDH+ +V E+K +++ D ++GRISLSTK L
Sbjct: 237 KPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFGVNDELKVMIIDLDAERGRISLSTKQL 296
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASSVADDIVSSLDIAS 513
E E GDM+ + VF AE+ A +Y ++ E ++ V + AS
Sbjct: 297 EPEAGDMLKNRDLVFEKAEEMAEKYRQKLLAEAQGEEMPTEENVEEVPSAS 347
[53][TOP]
>UniRef100_B9YLF3 RNA binding S1 domain protein n=1 Tax='Nostoc azollae' 0708
RepID=B9YLF3_ANAAZ
Length = 341
Score = 162 bits (409), Expect = 2e-38
Identities = 81/168 (48%), Positives = 119/168 (70%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +E+LVG ELPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 149 HISTRKP-KEELVGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGI 207
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H+ +V + EVK +++ D ++GRISLSTK L
Sbjct: 208 KPYGAFIDIGGVSGLLHISEISHEHIDTPHSVFNVNDEVKVMIIDLDAERGRISLSTKQL 267
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASSVADDIVSSLD 504
E EPGDM+ + V+ AE+ AA+Y ++ ++ ++ ++V +++
Sbjct: 268 EPEPGDMIKNRDLVYDKAEEMAAKYREQMLAKQQGITAAPVEVVEAVE 315
[54][TOP]
>UniRef100_A0ZA65 30S ribosomal protein S1 n=1 Tax=Nodularia spumigena CCY9414
RepID=A0ZA65_NODSP
Length = 383
Score = 162 bits (409), Expect = 2e-38
Identities = 84/169 (49%), Positives = 120/169 (71%), Gaps = 3/169 (1%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +E+LVG ELPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 149 HISTRKP-KEELVGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGI 207
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H+ +V + EVK +++ D ++GRISLSTK L
Sbjct: 208 KPYGAFIDIGGVSGLLHISEISHEHIDTPHSVFNVNDEVKVMIIDLDAERGRISLSTKQL 267
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARV---EEERAAASSVADDIVSS 498
E EPGDM+ + V+ AE+ AA+Y ++ ++ AA + A+++V +
Sbjct: 268 EPEPGDMIKNRDLVYDKAEEMAAKYREQMLAKQQGITAAPAEAEEVVGA 316
[55][TOP]
>UniRef100_B7FU58 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7FU58_PHATR
Length = 284
Score = 161 bits (407), Expect = 3e-38
Identities = 78/136 (57%), Positives = 102/136 (75%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
EDL+G L LKF++V+Q+ KLVVS+R A +M L G +V+G V+++KPYGAFV++
Sbjct: 149 EDLIGNNLQLKFLEVNQETNKLVVSNRKAVVEQQMADLSRGDLVAGMVKALKPYGAFVEV 208
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GG+SGLLHISQIS+D + D+E VL PGM+VK +++ DK GRI+LSTK LE EPGDM+
Sbjct: 209 GGMSGLLHISQISYDRIDDLEKVLQPGMQVKCMIIDHDKVNGRIALSTKTLEPEPGDMLK 268
Query: 388 DPAAVFAVAEDTAARY 435
DP VF AE TAA Y
Sbjct: 269 DPKMVFEKAEATAAAY 284
[56][TOP]
>UniRef100_Q3MD08 SSU ribosomal protein S1P n=1 Tax=Anabaena variabilis ATCC 29413
RepID=Q3MD08_ANAVT
Length = 343
Score = 160 bits (406), Expect = 4e-38
Identities = 89/198 (44%), Positives = 129/198 (65%), Gaps = 18/198 (9%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +E+LVG ELPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 149 HISTRKP-KEELVGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGI 207
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H+ +V + EVK +++ D ++GRISLSTK L
Sbjct: 208 KPYGAFIDIGGVSGLLHISEISHEHIDTPHSVFNVNDEVKVMIIDLDAERGRISLSTKQL 267
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARY----LAR--------------VEEERAAASSVADD 486
E EPGDM+ + V+ AE+ AA+Y LA+ +EEE S +D
Sbjct: 268 EPEPGDMIKNRDLVYDKAEEMAAKYREQLLAKQQGIALPAEGAEDLIEEE---IPSATED 324
Query: 487 IVSSLDIASLDDLXLGVD 540
V+ +I++++++ ++
Sbjct: 325 AVAEEEISAVEEIPAAIE 342
[57][TOP]
>UniRef100_Q01DM0 30S ribosomal protein S1 (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q01DM0_OSTTA
Length = 250
Score = 160 bits (406), Expect = 4e-38
Identities = 79/159 (49%), Positives = 110/159 (69%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HI +R +E+LVG +LP KFI+VD+++ +LV+SHRLA LE G VV G V++V
Sbjct: 87 HIGIRTLNREELVGQQLPFKFIEVDEEKNRLVLSHRLATDMVSAEGLEVGDVVEGMVQAV 146
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAFVD+GG SGLLHISQISH+ + +E VLS G +K VM++D ++GR+SLSTK L
Sbjct: 147 KPYGAFVDVGGQSGLLHISQISHERIVAVENVLSAGDRIKVLVMSKDAERGRLSLSTKKL 206
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASSV 477
E GDM+ +P+AVF AE+ ++ +++ SV
Sbjct: 207 EQNHGDMLRNPSAVFETAEEMGRQFREKMQAAEGVVMSV 245
[58][TOP]
>UniRef100_B4VZV8 S1 RNA binding domain protein n=1 Tax=Microcoleus chthonoplastes
PCC 7420 RepID=B4VZV8_9CYAN
Length = 323
Score = 160 bits (404), Expect = 7e-38
Identities = 80/145 (55%), Positives = 106/145 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +EDLVG ELPLKF++VD+D +LV+SHR A +M LE G VV G+VR +
Sbjct: 149 HISTRKP-KEDLVGEELPLKFLEVDEDRNRLVLSHRRALVERKMNRLEVGEVVVGSVRGI 207
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISHDH+ +V + E+K +++ D ++GRISLSTK L
Sbjct: 208 KPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVNDELKVMIIDLDAERGRISLSTKQL 267
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARY 435
E EPGDM+ + V+ AE+ A +Y
Sbjct: 268 EPEPGDMINNRDQVYDKAEEMAQKY 292
[59][TOP]
>UniRef100_Q8Z0G0 30S ribosomal protein S1 n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8Z0G0_ANASP
Length = 343
Score = 159 bits (403), Expect = 9e-38
Identities = 80/145 (55%), Positives = 107/145 (73%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +E+LVG ELPLKF++VD++ +LV+SHR A +M LE G VV GTVR +
Sbjct: 149 HISTRKP-KEELVGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGI 207
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISH+H+ +V + EVK +++ D ++GRISLSTK L
Sbjct: 208 KPYGAFIDIGGVSGLLHISEISHEHIDTPHSVFNVNDEVKVMIIDLDAERGRISLSTKQL 267
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARY 435
E EPGDM+ + V+ AE+ AA+Y
Sbjct: 268 EPEPGDMIKNRDLVYDKAEEMAAKY 292
[60][TOP]
>UniRef100_Q10VU3 SSU ribosomal protein S1P n=1 Tax=Trichodesmium erythraeum IMS101
RepID=Q10VU3_TRIEI
Length = 390
Score = 159 bits (403), Expect = 9e-38
Identities = 80/159 (50%), Positives = 112/159 (70%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R+ +EDL+ ELPLKF++VD++ +LV+SHR A +M LE G VV G VR +
Sbjct: 149 HISTRKP-KEDLLNEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGAVRGI 207
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISHDH++ +VL E+K +++ D D+GRISLSTK L
Sbjct: 208 KPYGAFIDIGGVSGLLHISEISHDHIETPSSVLKVNDELKVMIIDLDADRGRISLSTKQL 267
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASSV 477
E EPG M+ +P V+ AE+ AA++ ++ + ++V
Sbjct: 268 EPEPGAMVKNPQMVYDQAEEMAAKFREKMMAPQGGETAV 306
[61][TOP]
>UniRef100_Q93VC7 Putative uncharacterized protein n=1 Tax=Arabidopsis thaliana
RepID=Q93VC7_ARATH
Length = 416
Score = 156 bits (395), Expect = 8e-37
Identities = 77/151 (50%), Positives = 109/151 (72%)
Frame = +1
Query: 16 REAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGA 195
+ A E+L+ E+PLKF++VD+++ KLV+S+R A A S+ L G+VV G V+S+KPYGA
Sbjct: 221 KAAAEELLEKEIPLKFVEVDEEQTKLVLSNRKAVADSQ-AQLGIGSVVLGVVQSLKPYGA 279
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
F+DIGG++GLLH+SQISHD V DI VL PG +K +++ D+D+GR+SLSTK LE PG
Sbjct: 280 FIDIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTPG 339
Query: 376 DMMTDPAAVFAVAEDTAARYLARVEEERAAA 468
DM+ +P VF AE+ A + R+ + A A
Sbjct: 340 DMIRNPKLVFEKAEEMAQTFRQRIAQAEAMA 370
[62][TOP]
>UniRef100_P29344 30S ribosomal protein S1, chloroplastic n=1 Tax=Spinacia oleracea
RepID=RR1_SPIOL
Length = 411
Score = 156 bits (394), Expect = 1e-36
Identities = 75/151 (49%), Positives = 111/151 (73%)
Frame = +1
Query: 16 REAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGA 195
+ + E+L+ E+PLKF++VD+++ +LV+S+R A A S+ L G+VV+GTV+S+KPYGA
Sbjct: 218 KSSAEELLEKEIPLKFVEVDEEQSRLVMSNRKAMADSQ-AQLGIGSVVTGTVQSLKPYGA 276
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
F+DIGG++GLLH+SQISHD V DI VL PG +K +++ D+++GR+SLSTK LE PG
Sbjct: 277 FIDIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPG 336
Query: 376 DMMTDPAAVFAVAEDTAARYLARVEEERAAA 468
DM+ +P VF AE+ A + R+ + A A
Sbjct: 337 DMIRNPKLVFEKAEEMAQTFRQRIAQAEAMA 367
[63][TOP]
>UniRef100_B9HX66 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9HX66_POPTR
Length = 412
Score = 155 bits (393), Expect = 1e-36
Identities = 75/151 (49%), Positives = 110/151 (72%)
Frame = +1
Query: 16 REAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGA 195
+ + E+L+ E+PLKF+ VD+++ +LV+S+R A A S+ L G+VV+GTV+S+KPYGA
Sbjct: 219 KSSAEELLDKEVPLKFVDVDEEQSRLVLSNRKAMADSQ-AQLGIGSVVTGTVQSLKPYGA 277
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
F+DIGG++GLLH+SQISHD V DI VL PG +K +++ D+++GR+SLSTK LE PG
Sbjct: 278 FIDIGGINGLLHVSQISHDRVSDISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPG 337
Query: 376 DMMTDPAAVFAVAEDTAARYLARVEEERAAA 468
DM+ +P VF AE+ A + R+ + A A
Sbjct: 338 DMIRNPKLVFEKAEEMARTFRQRIAQAEAMA 368
[64][TOP]
>UniRef100_C1EEV9 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EEV9_9CHLO
Length = 387
Score = 155 bits (392), Expect = 2e-36
Identities = 75/158 (47%), Positives = 111/158 (70%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HI++R +++L+G +P+KF++VD+++ +LV+S+RLA L G V G V++V
Sbjct: 204 HIAMRVPNRDELIGQSVPVKFLEVDEEKNRLVMSNRLATDVVSGEGLGVGDVCKGVVQAV 263
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAFVD+GGVSGLLHISQISHD + +E VL+PG E+K ++++D ++ R+SLSTK L
Sbjct: 264 KPYGAFVDVGGVSGLLHISQISHDRIVAVENVLAPGDELKVLILSKDAERSRLSLSTKKL 323
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASS 474
E PGDM+ +PA VF A++ + RV AAA +
Sbjct: 324 EPSPGDMLRNPALVFEKADEMGRLFRERVAAAEAAAQA 361
[65][TOP]
>UniRef100_B9RZW3 Tex protein-relatedtranscription accessory protein, putative n=1
Tax=Ricinus communis RepID=B9RZW3_RICCO
Length = 412
Score = 154 bits (390), Expect = 3e-36
Identities = 76/151 (50%), Positives = 108/151 (71%)
Frame = +1
Query: 16 REAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGA 195
+ E+L+ ELPLKF+ VD+++ +LV+S+R A A S+ L G+VV GTV+S+KPYGA
Sbjct: 220 KSTAEELLEKELPLKFVDVDEEQSRLVLSNRKAMADSQ-AQLGIGSVVIGTVQSLKPYGA 278
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
F+DIGG++GLLH+SQISHD V DI VL PG +K +++ D+++GR+SLSTK LE PG
Sbjct: 279 FIDIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPG 338
Query: 376 DMMTDPAAVFAVAEDTAARYLARVEEERAAA 468
DM+ +P VF AE+ A + R+ + A A
Sbjct: 339 DMIRNPKLVFEKAEEMAQTFRQRIAQAEAMA 369
[66][TOP]
>UniRef100_A7Q8U9 Chromosome chr5 scaffold_64, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7Q8U9_VITVI
Length = 410
Score = 154 bits (390), Expect = 3e-36
Identities = 75/147 (51%), Positives = 109/147 (74%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
E+L+ ELP+KF++VD+++ +LV+S+R A A S+ L G+VV+GTV+S+KPYGAF+DI
Sbjct: 221 EELLDKELPVKFVEVDEEQSRLVLSNRKAMADSQ-AQLGIGSVVTGTVQSLKPYGAFIDI 279
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GG++GLLH+SQISHD V DI VL PG +K +++ D+++GR+SLSTK LE PGDM+
Sbjct: 280 GGINGLLHVSQISHDRVSDIATVLQPGDILKVMILSHDRERGRVSLSTKKLEPTPGDMIR 339
Query: 388 DPAAVFAVAEDTAARYLARVEEERAAA 468
+P VF AE+ A + R+ + A A
Sbjct: 340 NPKLVFEKAEEMAQTFRQRIAQAEAMA 366
[67][TOP]
>UniRef100_C6T883 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T883_SOYBN
Length = 412
Score = 154 bits (389), Expect = 4e-36
Identities = 74/147 (50%), Positives = 109/147 (74%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
E+L+ ELPLKF++VD+++ +LV+S+R A A ++ L G+VV+G+V+S+KPYGAF+DI
Sbjct: 223 EELLDKELPLKFVEVDEEQSRLVLSNRKAVAGNQ-AQLGIGSVVTGSVQSLKPYGAFIDI 281
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GG++GLLH+SQISHD V DI VL PG +K +++ D+++GR+SLSTK LE PGDM+
Sbjct: 282 GGINGLLHVSQISHDRVTDISTVLQPGDILKVMILSHDRERGRVSLSTKKLEPTPGDMIR 341
Query: 388 DPAAVFAVAEDTAARYLARVEEERAAA 468
+P VF AE+ A + R+ + A A
Sbjct: 342 NPKLVFEKAEEMAQTFRQRIAQAEAMA 368
[68][TOP]
>UniRef100_A9PE95 Predicted protein n=1 Tax=Populus trichocarpa RepID=A9PE95_POPTR
Length = 421
Score = 154 bits (389), Expect = 4e-36
Identities = 74/151 (49%), Positives = 108/151 (71%)
Frame = +1
Query: 16 REAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGA 195
+ E+L+ E PLKF+ VD+++ +L++S+R A A S+ L G+VV+GTV+S+KPYGA
Sbjct: 219 KSTPEELLDKEFPLKFVDVDEEQSRLILSNRKAMADSQ-AQLGIGSVVTGTVQSLKPYGA 277
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
F+DIGG++GLLH+SQISHD V DI VL PG +K +++ D+++GR+SLSTK LE PG
Sbjct: 278 FIDIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPG 337
Query: 376 DMMTDPAAVFAVAEDTAARYLARVEEERAAA 468
DM+ +P VF AE+ A + R+ + A A
Sbjct: 338 DMIRNPKLVFEKAEEMAQTFRQRIAQAEAMA 368
[69][TOP]
>UniRef100_P73530 30S ribosomal protein S1 homolog A n=1 Tax=Synechocystis sp. PCC
6803 RepID=RS1A_SYNY3
Length = 328
Score = 154 bits (388), Expect = 5e-36
Identities = 84/182 (46%), Positives = 119/182 (65%), Gaps = 8/182 (4%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
HIS R EA+EDLVG +LPLKF++VD++ +LV+SHR A +M LE VV G+VR +
Sbjct: 148 HISAR-EAKEDLVGEDLPLKFLEVDEERNRLVLSHRRALVERKMNGLEVAQVVVGSVRGI 206
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+DIGGVSGLLHIS+ISHDH+ +V + E+K +++ D ++GRISLSTK L
Sbjct: 207 KPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVNDEIKVMIIDLDAERGRISLSTKQL 266
Query: 361 EAEPGDMMTDPAAVFAVAEDTA----ARYLARVE----EERAAASSVADDIVSSLDIASL 516
E EPG M+ D V +A++ A + LA + E + D+ SL ++++
Sbjct: 267 EPEPGAMLKDRDLVNEMADEMAEIFRQKRLAEAQGIPYEPPTSVDDTDDEEDESLAVSAV 326
Query: 517 DD 522
D+
Sbjct: 327 DE 328
[70][TOP]
>UniRef100_Q0DSD6 Os03g0315800 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group
RepID=Q0DSD6_ORYSJ
Length = 390
Score = 152 bits (385), Expect = 1e-35
Identities = 75/151 (49%), Positives = 108/151 (71%)
Frame = +1
Query: 16 REAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGA 195
+ E+L+ ELPLKF++VD+++ +LV+S+R A A S+ L G+VV GTV S+KPYGA
Sbjct: 200 KSTAEELLDKELPLKFVEVDEEQGRLVLSNRKAMADSQ-AQLGIGSVVLGTVESLKPYGA 258
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
F+DIGG++GLLH+SQISHD V DI VL PG +K +++ D+++GR+SLSTK LE PG
Sbjct: 259 FIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPG 318
Query: 376 DMMTDPAAVFAVAEDTAARYLARVEEERAAA 468
DM+ +P VF A++ A + R+ + A A
Sbjct: 319 DMIRNPKLVFEKADEMAQIFRQRIAQAEAMA 349
[71][TOP]
>UniRef100_B9F848 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9F848_ORYSJ
Length = 382
Score = 152 bits (385), Expect = 1e-35
Identities = 75/151 (49%), Positives = 108/151 (71%)
Frame = +1
Query: 16 REAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGA 195
+ E+L+ ELPLKF++VD+++ +LV+S+R A A S+ L G+VV GTV S+KPYGA
Sbjct: 192 KSTAEELLDKELPLKFVEVDEEQGRLVLSNRKAMADSQ-AQLGIGSVVLGTVESLKPYGA 250
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
F+DIGG++GLLH+SQISHD V DI VL PG +K +++ D+++GR+SLSTK LE PG
Sbjct: 251 FIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPG 310
Query: 376 DMMTDPAAVFAVAEDTAARYLARVEEERAAA 468
DM+ +P VF A++ A + R+ + A A
Sbjct: 311 DMIRNPKLVFEKADEMAQIFRQRIAQAEAMA 341
[72][TOP]
>UniRef100_A6N017 30S ribosomal protein S1 (Fragment) n=1 Tax=Oryza sativa Indica
Group RepID=A6N017_ORYSI
Length = 217
Score = 152 bits (385), Expect = 1e-35
Identities = 75/151 (49%), Positives = 108/151 (71%)
Frame = +1
Query: 16 REAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGA 195
+ E+L+ ELPLKF++VD+++ +LV+S+R A A S+ L G+VV GTV S+KPYGA
Sbjct: 27 KSTAEELLDKELPLKFVEVDEEQGRLVLSNRKAMADSQ-AQLGIGSVVLGTVESLKPYGA 85
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
F+DIGG++GLLH+SQISHD V DI VL PG +K +++ D+++GR+SLSTK LE PG
Sbjct: 86 FIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPG 145
Query: 376 DMMTDPAAVFAVAEDTAARYLARVEEERAAA 468
DM+ +P VF A++ A + R+ + A A
Sbjct: 146 DMIRNPKLVFEKADEMAQIFRQRIAQAEAMA 176
[73][TOP]
>UniRef100_Q10MB2 30S ribosomal protein S1, chloroplast, putative, expressed n=2
Tax=Oryza sativa RepID=Q10MB2_ORYSJ
Length = 402
Score = 152 bits (385), Expect = 1e-35
Identities = 75/151 (49%), Positives = 108/151 (71%)
Frame = +1
Query: 16 REAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGA 195
+ E+L+ ELPLKF++VD+++ +LV+S+R A A S+ L G+VV GTV S+KPYGA
Sbjct: 212 KSTAEELLDKELPLKFVEVDEEQGRLVLSNRKAMADSQ-AQLGIGSVVLGTVESLKPYGA 270
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
F+DIGG++GLLH+SQISHD V DI VL PG +K +++ D+++GR+SLSTK LE PG
Sbjct: 271 FIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPG 330
Query: 376 DMMTDPAAVFAVAEDTAARYLARVEEERAAA 468
DM+ +P VF A++ A + R+ + A A
Sbjct: 331 DMIRNPKLVFEKADEMAQIFRQRIAQAEAMA 361
[74][TOP]
>UniRef100_Q70DX8 Plastid ribosomal protein S1 n=1 Tax=Chlamydomonas reinhardtii
RepID=Q70DX8_CHLRE
Length = 436
Score = 152 bits (384), Expect = 2e-35
Identities = 72/166 (43%), Positives = 117/166 (70%), Gaps = 2/166 (1%)
Frame = +1
Query: 7 SVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAA--ASRMTSLETGTVVSGTVRSV 180
S+ + E LVG EL +KF++VD++ ++LV SH+ A++ ++ + + G VV+G V+SV
Sbjct: 262 SITPDNMESLVGFELQVKFLEVDEEAERLVFSHKRASSTVSNDIQGFKVGDVVAGVVQSV 321
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KPYGAF+D+GGV+GLLH+SQISHD V ++ +L G ++K +++QD+++GR++LSTK L
Sbjct: 322 KPYGAFIDLGGVTGLLHVSQISHDRVLVLDKILQEGDKIKVMILSQDRERGRVTLSTKKL 381
Query: 361 EAEPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASSVADDIVSS 498
E PGDM+ DP V+ AE+ A ++ RVE+ +A+ D + +
Sbjct: 382 EPTPGDMLRDPQLVYEKAEEMAEQFRKRVEQAAQSAAEPQPDTLGA 427
[75][TOP]
>UniRef100_B4FUZ5 30S ribosomal protein S1 n=1 Tax=Zea mays RepID=B4FUZ5_MAIZE
Length = 401
Score = 152 bits (383), Expect = 2e-35
Identities = 75/147 (51%), Positives = 107/147 (72%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
E+L+ ELPLKF++VD+++ +LV+S+R A A S+ L G+VV GTV S+KPYGAF+DI
Sbjct: 217 EELLEKELPLKFVEVDEEQGRLVLSNRKAMADSQ-AQLGIGSVVLGTVESLKPYGAFIDI 275
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GG++GLLH+SQISHD V DI VL PG +K +++ D+++GR+SLSTK LE PGDM+
Sbjct: 276 GGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 335
Query: 388 DPAAVFAVAEDTAARYLARVEEERAAA 468
+P VF A++ A + R+ + A A
Sbjct: 336 NPKLVFEKADEMAQIFRQRIAQAEAMA 362
[76][TOP]
>UniRef100_C5X1V3 Putative uncharacterized protein Sb01g037100 n=1 Tax=Sorghum
bicolor RepID=C5X1V3_SORBI
Length = 400
Score = 151 bits (381), Expect = 3e-35
Identities = 74/147 (50%), Positives = 107/147 (72%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
E+L+ ELPLK+++VD+++ +LV+S+R A A S+ L G+VV GTV S+KPYGAF+DI
Sbjct: 217 EELLDKELPLKYVEVDEEQGRLVLSNRKAMADSQ-AQLGIGSVVLGTVESLKPYGAFIDI 275
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GG++GLLH+SQISHD V DI VL PG +K +++ D+++GR+SLSTK LE PGDM+
Sbjct: 276 GGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 335
Query: 388 DPAAVFAVAEDTAARYLARVEEERAAA 468
+P VF A++ A + R+ + A A
Sbjct: 336 NPKLVFEKADEMAQVFRQRIAQAEAMA 362
[77][TOP]
>UniRef100_A9NYG1 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NYG1_PICSI
Length = 425
Score = 151 bits (381), Expect = 3e-35
Identities = 71/147 (48%), Positives = 108/147 (73%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
E+LV E+PLKF++VD+++ +LV+S+R A A S+ L G+VV GTV+++KPYGAFVD+
Sbjct: 238 EELVNKEIPLKFMEVDEEQTRLVLSNRKAMADSQ-AQLGIGSVVLGTVQTIKPYGAFVDL 296
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GG++GLLH+SQISHD V D+ +L PG +K +++ D+++GR+SLSTK LE PGDM+
Sbjct: 297 GGINGLLHVSQISHDRVADVGTILQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMLR 356
Query: 388 DPAAVFAVAEDTAARYLARVEEERAAA 468
+P V+ A++ A + R+ + A A
Sbjct: 357 NPTLVYEKADEMAQTFRQRIAQAEAMA 383
[78][TOP]
>UniRef100_C0Z2U7 AT5G30510 protein n=1 Tax=Arabidopsis thaliana RepID=C0Z2U7_ARATH
Length = 378
Score = 147 bits (371), Expect = 5e-34
Identities = 71/130 (54%), Positives = 99/130 (76%)
Frame = +1
Query: 16 REAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGA 195
+ A E+L+ E+PLKF++VD+++ KLV+S+R A A S+ L G+VV G V+S+KPYGA
Sbjct: 221 KAAAEELLEKEIPLKFVEVDEEQTKLVLSNRKAVADSQ-AQLGIGSVVLGVVQSLKPYGA 279
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
F+DIGG++GLLH+SQISHD V DI VL PG +K +++ D+D+GR+SLSTK LE PG
Sbjct: 280 FIDIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTPG 339
Query: 376 DMMTDPAAVF 405
DM+ +P VF
Sbjct: 340 DMIRNPKLVF 349
[79][TOP]
>UniRef100_Q7XYL3 Ribosomal protein rpS1 n=1 Tax=Bigelowiella natans
RepID=Q7XYL3_BIGNA
Length = 419
Score = 143 bits (360), Expect = 9e-33
Identities = 72/154 (46%), Positives = 110/154 (71%), Gaps = 2/154 (1%)
Frame = +1
Query: 25 QEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVD 204
+++++G +P+KF++VD + ++LV+S+R A A+S + + G VV GTV ++KPYGAF++
Sbjct: 255 KDEMIGKVIPVKFLEVDMENQRLVMSNRRAVASSFKKNYKVGDVVVGTVTALKPYGAFIN 314
Query: 205 IGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMM 384
+GGV+GLLHISQISHDHV ++ V+ G ++K +M++D++ GR+SLSTK LE GDM+
Sbjct: 315 LGGVNGLLHISQISHDHVTSVKDVMDVGQKLKVMIMSRDQN-GRVSLSTKRLEPNAGDML 373
Query: 385 TDPAAVFAVAEDTAARY--LARVEEERAAASSVA 480
P VF AE+ AAR+ AR EE A S +
Sbjct: 374 RSPQLVFEKAEEMAARFKEQARAAEEATRALSAS 407
[80][TOP]
>UniRef100_B3SL74 At5g30510-like protein (Fragment) n=5 Tax=Arabidopsis
RepID=B3SL74_ARALP
Length = 186
Score = 137 bits (344), Expect = 7e-31
Identities = 66/120 (55%), Positives = 92/120 (76%)
Frame = +1
Query: 16 REAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGA 195
+ A E+L+ E+PLKF++VD+++ KLV+S+R A A S+ L G+VV G V+S+KPYGA
Sbjct: 68 KAAAEELLEKEIPLKFVEVDEEQTKLVLSNRKAVADSQ-AQLGIGSVVLGVVQSLKPYGA 126
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
F+DIGG++GLLH+SQISHD V DI VL PG +K +++ D+D+GR+SLSTK LE PG
Sbjct: 127 FIDIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTPG 186
[81][TOP]
>UniRef100_B0C7U0 30S ribosomal protein S1 n=1 Tax=Acaryochloris marina MBIC11017
RepID=B0C7U0_ACAM1
Length = 289
Score = 132 bits (333), Expect = 1e-29
Identities = 66/147 (44%), Positives = 101/147 (68%)
Frame = +1
Query: 16 REAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGA 195
R+ E +G +L + F++VD D KKLV+S+R+A +SR+ LE G +VSGTV +KP+GA
Sbjct: 143 RDNLEGQIGSQLTVTFLEVDPDRKKLVLSNRMAEQSSRIGELEIGQLVSGTVSDLKPFGA 202
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
F+ + G++GLLHI ++S + V ++ AVL G +KA V++ D +GR+SLSTKVLE PG
Sbjct: 203 FIKLDGLTGLLHIKEVSQNFVPNLSAVLKIGEPIKAIVLDLDPGRGRVSLSTKVLENRPG 262
Query: 376 DMMTDPAAVFAVAEDTAARYLARVEEE 456
+++ V A AE A RYL ++ ++
Sbjct: 263 EIVDSMEQVMAEAEIRANRYLEKMRQQ 289
[82][TOP]
>UniRef100_A3YYV2 30S ribosomal protein S1-like B, putative n=1 Tax=Synechococcus sp.
WH 5701 RepID=A3YYV2_9SYNE
Length = 403
Score = 131 bits (330), Expect = 3e-29
Identities = 72/150 (48%), Positives = 97/150 (64%), Gaps = 2/150 (1%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E E LVG + F++V+ D +KLV+S + AA+AS + LE G +V G V SVKPYG F
Sbjct: 253 ENHEQLVGTSFAVAFLEVNADTRKLVLSEKRAASASLLAELEVGQLVDGQVVSVKPYGFF 312
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
VD+GGVSGLLH S I+ H++DI S G +KA V D +GRI+L+T +LE +PG+
Sbjct: 313 VDLGGVSGLLHQSSITGVHLRDIREAFSQGERLKALVTQIDPSRGRIALNTALLETQPGE 372
Query: 379 MMTDPAAVFAVAEDTA--ARYLARVEEERA 462
++T V A AED A AR L R +E+ A
Sbjct: 373 LLTAKDTVMAEAEDRANRARLLLRQQEQEA 402
[83][TOP]
>UniRef100_B4WRF0 S1 RNA binding domain protein n=1 Tax=Synechococcus sp. PCC 7335
RepID=B4WRF0_9SYNE
Length = 304
Score = 129 bits (323), Expect = 2e-28
Identities = 63/142 (44%), Positives = 98/142 (69%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
H++ R E + L+G + F++VD+++ KL++S R+AA A+ M+SL G ++ GT+ S+
Sbjct: 151 HLARRVEDLDTLMGATINAAFLEVDEEKNKLLLSERIAARATAMSSLTKGELIEGTIASL 210
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KP+GAFVD GG SGLLHI QIS ++ + V G +KA V+N D+ +GRI+LST+VL
Sbjct: 211 KPFGAFVDFGGASGLLHIKQISKSYISALGDVFKVGDPIKAVVLNIDEQRGRIALSTQVL 270
Query: 361 EAEPGDMMTDPAAVFAVAEDTA 426
E PG+++ D + + A AE+ A
Sbjct: 271 EKYPGEILKDLSTMMAEAEERA 292
[84][TOP]
>UniRef100_A9BEF4 30S ribosomal protein S1-like protein B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. MIT 9211
RepID=A9BEF4_PROM4
Length = 416
Score = 124 bits (311), Expect = 4e-27
Identities = 60/138 (43%), Positives = 91/138 (65%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E E LVG +L + FI+V+ D +KL++S + AA A+R LE G +V+G + ++KPYG F
Sbjct: 265 ENHESLVGKKLCVAFIEVNPDSRKLILSEKKAATAARFAELEIGQIVAGEILAIKPYGFF 324
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
VD+GGVSGLLH S I++ ++ + V S G +KA + + D +GRI L+T +LE PG+
Sbjct: 325 VDLGGVSGLLHQSMITNGSIRSLREVFSQGESIKALITDLDPKRGRIGLNTALLEGPPGE 384
Query: 379 MMTDPAAVFAVAEDTAAR 432
++ + A V AED A +
Sbjct: 385 ILVEKAKVLLEAEDRAKK 402
[85][TOP]
>UniRef100_A3Z5H4 30S ribosomal protein S1-like B, putative n=1 Tax=Synechococcus sp.
RS9917 RepID=A3Z5H4_9SYNE
Length = 432
Score = 120 bits (301), Expect = 6e-26
Identities = 65/150 (43%), Positives = 95/150 (63%), Gaps = 2/150 (1%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E E LVG L + F++V+ + +KLV+S + AA A+R LE G +V GTV +VKPYG F
Sbjct: 282 ENHEALVGKTLGVAFLEVNAETRKLVLSEKRAATAARFAELEVGQLVEGTVVAVKPYGFF 341
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
VD+GG+SGLLH S I+ ++ + V G VKA + D +GRI+L+T +LE +PG+
Sbjct: 342 VDLGGISGLLHQSMITGGSMRSLREVFDQGDAVKALITELDPGRGRIALNTALLEGQPGE 401
Query: 379 MMTDPAAVFAVAEDTA--ARYLARVEEERA 462
++ + V A A D A AR + R +E+ A
Sbjct: 402 LLIEKDTVMAEAADRANRARNVLRQQEQSA 431
[86][TOP]
>UniRef100_A2C7R6 30S ribosomal protein S1 protein B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. MIT 9303
RepID=A2C7R6_PROM3
Length = 481
Score = 119 bits (299), Expect = 1e-25
Identities = 64/150 (42%), Positives = 96/150 (64%), Gaps = 2/150 (1%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E E LVG L + F++V+ + +KLV+S + AA A+R + LE G +V G V +VKPYG F
Sbjct: 331 ENHEALVGKTLGVAFLEVNPETRKLVLSEKRAATAARFSELEVGQLVEGQVVAVKPYGFF 390
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
+D+GGVSGLLH S I+ ++ + V + G VKA + D +GRI+L+T +LE +PG+
Sbjct: 391 IDLGGVSGLLHQSMITGGSLRSLREVFNQGDRVKALITEMDPGRGRIALNTALLEGQPGE 450
Query: 379 MMTDPAAVFAVAEDTA--ARYLARVEEERA 462
++ + V A A D A AR + R +E+ A
Sbjct: 451 LLIEKDKVMAEATDRANKARNVLRQQEQSA 480
[87][TOP]
>UniRef100_Q0QKQ2 30S ribosomal protein S1 homolog B n=1 Tax=uncultured marine type-A
Synechococcus GOM 3M9 RepID=Q0QKQ2_9SYNE
Length = 423
Score = 119 bits (299), Expect = 1e-25
Identities = 59/138 (42%), Positives = 89/138 (64%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E ++LVG L + F++V+ + +KLV+S + AA A+R + LE G +V G V +VKPYG F
Sbjct: 273 ENHQELVGKTLGVAFLEVNSETRKLVLSEKRAAVAARFSELEVGQLVEGQVAAVKPYGLF 332
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
+D+GG+SGLLH S I++ ++ I V G VKA + D +GRI L+T +LE PG+
Sbjct: 333 IDLGGISGLLHQSMITNGSLRSIREVFDQGDRVKAMITELDPGRGRIGLNTALLEGPPGE 392
Query: 379 MMTDPAAVFAVAEDTAAR 432
++ + V A A D A+R
Sbjct: 393 LLVEKDKVMAEAADRASR 410
[88][TOP]
>UniRef100_B5ILL4 Putative uncharacterized protein n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5ILL4_9CHRO
Length = 422
Score = 119 bits (299), Expect = 1e-25
Identities = 62/150 (41%), Positives = 95/150 (63%), Gaps = 2/150 (1%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E E LVG L + F++V+ + +KLV+S + AA A+R LE G +V G V S+KPYG F
Sbjct: 272 ENHEALVGKTLGVTFLEVNPETRKLVLSEKRAATAARFAELEVGQLVEGVVASIKPYGFF 331
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
VD+GG+SGLLH S ++ ++D+ S G + A + + D +GRI+L+T +LE +PG+
Sbjct: 332 VDLGGISGLLHHSCVTGAELRDLREAFSQGERLSALITDLDPGRGRIALNTALLEGQPGE 391
Query: 379 MMTDPAAVFAVAEDTA--ARYLARVEEERA 462
++ + V A A D A AR + R +E+ A
Sbjct: 392 LLVEKERVMAEAADRANRARSVLRQQEQNA 421
[89][TOP]
>UniRef100_Q7VD53 Ribosomal protein S1 n=1 Tax=Prochlorococcus marinus
RepID=Q7VD53_PROMA
Length = 417
Score = 119 bits (298), Expect = 1e-25
Identities = 63/145 (43%), Positives = 93/145 (64%), Gaps = 2/145 (1%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
E LVG + + FI+V D +KL++S + AA A++ LE G ++ G V SVKPYG FVD+
Sbjct: 270 ESLVGKTINVAFIEVSPDNRKLILSEKKAATAAKFAELEVGQLIEGKVISVKPYGFFVDL 329
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GG+SGLLH S I++ ++ + V + G VKA + + D +GRI L+T +LE PG+++
Sbjct: 330 GGISGLLHQSMITNGSLRSLREVFNQGDNVKALITDLDPARGRIGLNTALLEGLPGELLI 389
Query: 388 DPAAVFAVAEDTA--ARYLARVEEE 456
D V A AED A A+ L + +EE
Sbjct: 390 DKEKVLAEAEDRAKKAQGLFKPKEE 414
[90][TOP]
>UniRef100_Q7V6D2 30S ribosomal protein S1 homolog B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. MIT 9313
RepID=Q7V6D2_PROMM
Length = 421
Score = 119 bits (298), Expect = 1e-25
Identities = 63/150 (42%), Positives = 96/150 (64%), Gaps = 2/150 (1%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E E L+G L + F++V+ + +KLV+S + AA A+R + LE G +V G V +VKPYG F
Sbjct: 271 ENHEALIGKTLGVAFLEVNPETRKLVLSEKRAATAARFSELEVGQLVEGQVVAVKPYGFF 330
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
+D+GGVSGLLH S I+ ++ + V + G VKA + D +GRI+L+T +LE +PG+
Sbjct: 331 IDLGGVSGLLHQSMITGGSLRSLREVFNQGDRVKALITEMDPGRGRIALNTALLEGQPGE 390
Query: 379 MMTDPAAVFAVAEDTA--ARYLARVEEERA 462
++ + V A A D A AR + R +E+ A
Sbjct: 391 LLIEKDKVMAEATDRANKARNVLRQQEQSA 420
[91][TOP]
>UniRef100_Q3AV59 SSU ribosomal protein S1P n=1 Tax=Synechococcus sp. CC9902
RepID=Q3AV59_SYNS9
Length = 412
Score = 119 bits (298), Expect = 1e-25
Identities = 61/150 (40%), Positives = 92/150 (61%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E ++LVG L + F++V+ +KLV+S + AA A+R LE G +V G V SVKPYG F
Sbjct: 262 ENHQELVGKTLGVAFLEVNSGTRKLVLSEKRAATAARFQELEVGQLVEGLVASVKPYGLF 321
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
+D+GG+SGLLH S I++ ++ I V G V A + + D +GRI L+T +LE PG+
Sbjct: 322 IDLGGISGLLHQSSITNGSLRSIREVFDQGDRVSALITDLDPGRGRIGLNTALLEGPPGE 381
Query: 379 MMTDPAAVFAVAEDTAARYLARVEEERAAA 468
++ D V A A D A+R +++ +A
Sbjct: 382 LLIDKDKVMAEASDRASRAQNTLKQNEQSA 411
[92][TOP]
>UniRef100_Q0QKF1 30S ribosomal protein S1 homolog B n=1 Tax=uncultured marine type-A
Synechococcus GOM 3O12 RepID=Q0QKF1_9SYNE
Length = 408
Score = 119 bits (297), Expect = 2e-25
Identities = 59/138 (42%), Positives = 88/138 (63%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E ++LVG L + FI+V+ + +KLV+S + AA A+R LE G +V G V +VKPYG F
Sbjct: 258 ENHQELVGKTLGVAFIEVNSETRKLVLSQKRAAVAARFQELEVGQLVEGVVAAVKPYGLF 317
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
+D+GG+SGLLH S I++ ++ I V G V+A + D +GRI L+T +LE PG+
Sbjct: 318 IDLGGISGLLHQSAITNGSLRSIREVFDQGERVQALITELDPGRGRIGLNTALLEGPPGE 377
Query: 379 MMTDPAAVFAVAEDTAAR 432
++ + V A A D A+R
Sbjct: 378 LLVEKDKVMAEASDRASR 395
[93][TOP]
>UniRef100_Q0QKJ9 30S ribosomal protein S1 homolog B n=1 Tax=uncultured marine type-A
Synechococcus GOM 3O6 RepID=Q0QKJ9_9SYNE
Length = 408
Score = 118 bits (296), Expect = 2e-25
Identities = 59/147 (40%), Positives = 92/147 (62%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
++LVG L + FI+V+ + +KLV+S + AA A+R LE G +V G V +VKPYG F+D+
Sbjct: 261 QELVGKTLGVAFIEVNSETRKLVLSQKRAAVAARFQELEVGQLVEGVVAAVKPYGLFIDL 320
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GG+SGLLH S I++ ++ I V G V+A + D +GRI L+T +LE PG+++
Sbjct: 321 GGISGLLHQSSITNGSLRSIREVFDQGERVQALITELDPGRGRIGLNTALLEGPPGELLI 380
Query: 388 DPAAVFAVAEDTAARYLARVEEERAAA 468
+ V A A D A+R + +++ A
Sbjct: 381 EKDKVMAEASDRASRAQSMLKQREQEA 407
[94][TOP]
>UniRef100_Q8YXX8 30S ribosomal protein S1 n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8YXX8_ANASP
Length = 305
Score = 118 bits (295), Expect = 3e-25
Identities = 59/146 (40%), Positives = 90/146 (61%)
Frame = +1
Query: 16 REAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGA 195
R+ E L G L F++VD++ KKLV+S RL +S LE G +V G + +KP+G
Sbjct: 155 RDNLEALKGHTLTAGFLEVDRNNKKLVLSQRLVTRSSNFNQLEIGQLVEGKITGIKPFGV 214
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
FVD+ G+S LLHI Q+S ++ +E V PG +KA V++ D+ KGR+++ST+ LE PG
Sbjct: 215 FVDLNGLSALLHIKQVSQKFIESLEKVFQPGQTIKAIVIDLDQGKGRVAISTRALENFPG 274
Query: 376 DMMTDPAAVFAVAEDTAARYLARVEE 453
+++ + V A AE A R ++ E
Sbjct: 275 EVLENFEEVMASAEARANRAANKMNE 300
[95][TOP]
>UniRef100_Q3M6P9 SSU ribosomal protein S1P n=1 Tax=Anabaena variabilis ATCC 29413
RepID=Q3M6P9_ANAVT
Length = 302
Score = 118 bits (295), Expect = 3e-25
Identities = 59/146 (40%), Positives = 90/146 (61%)
Frame = +1
Query: 16 REAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGA 195
R+ E L G L F++VD++ KKLV+S RL +S LE G +V G + +KP+G
Sbjct: 155 RDNLEALKGHTLTAGFLEVDRNNKKLVLSQRLVTRSSNFNQLEIGQLVEGKITGIKPFGV 214
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
FVD+ G+S LLHI Q+S ++ +E V PG +KA V++ D+ KGR+++ST+ LE PG
Sbjct: 215 FVDLNGLSALLHIKQVSQKFIESLEKVFQPGQTIKAIVIDLDQGKGRVAISTRALENFPG 274
Query: 376 DMMTDPAAVFAVAEDTAARYLARVEE 453
+++ + V A AE A R ++ E
Sbjct: 275 EVLENFEEVMASAEARAHRAANKMSE 300
[96][TOP]
>UniRef100_Q3ALN4 RNA binding S1 n=1 Tax=Synechococcus sp. CC9605 RepID=Q3ALN4_SYNSC
Length = 424
Score = 118 bits (295), Expect = 3e-25
Identities = 60/150 (40%), Positives = 92/150 (61%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E ++LVG L + FI+V+ + +KLV+S + AA A R LE G +V G V +VKPYG F
Sbjct: 274 ENHQELVGKTLGVAFIEVNSETRKLVLSEKRAAVAERFQDLEVGQLVEGQVAAVKPYGLF 333
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
+D+GG+SGLLH S I++ ++ I V G V A + D +GRI L+T +LE PG+
Sbjct: 334 IDLGGISGLLHQSAITNGRLRSIREVFDQGDRVSALITELDPGRGRIGLNTALLEGPPGE 393
Query: 379 MMTDPAAVFAVAEDTAARYLARVEEERAAA 468
++ + V A A D A+R ++++ +A
Sbjct: 394 LLIEKDKVMAEAADRASRAQNTLKQQEQSA 423
[97][TOP]
>UniRef100_A5GJG3 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GJG3_SYNPW
Length = 403
Score = 118 bits (295), Expect = 3e-25
Identities = 63/150 (42%), Positives = 95/150 (63%), Gaps = 2/150 (1%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E E LVG L + F++V+ + +KLV+S + AA A+R LE G +V G V +VKPYG F
Sbjct: 253 ENHEALVGKTLGVAFLEVNPETRKLVLSEKKAATAARFAELEVGQLVEGHVAAVKPYGLF 312
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
+D+GG+SGLLH S I+ ++ + V G VKA + D +GRI+L+T +LE +PG+
Sbjct: 313 IDLGGISGLLHQSMITGGSLRSLREVFDQGDTVKALITELDPGRGRIALNTAMLEGQPGE 372
Query: 379 MMTDPAAVFAVAEDTA--ARYLARVEEERA 462
++ + AV A A + A AR + R +E+ A
Sbjct: 373 LLINRDAVMAEASERANRARNVLRQQEQSA 402
[98][TOP]
>UniRef100_A4CS32 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 7805
RepID=A4CS32_SYNPV
Length = 430
Score = 118 bits (295), Expect = 3e-25
Identities = 64/150 (42%), Positives = 93/150 (62%), Gaps = 2/150 (1%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E E LVG L + F++V+ D +KLV+S + AA A+R LE G +V G V +VKPYG F
Sbjct: 280 ENHEALVGKTLGVAFLEVNPDTRKLVLSEKKAATAARFAELEVGQLVEGHVAAVKPYGLF 339
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
+D+GG+SGLLH S I+ ++ I V G VKA + D +GRI+L+T +LE +PG+
Sbjct: 340 IDLGGISGLLHQSMITGGSLRSIREVFDHGDSVKALITELDPGRGRIALNTAMLEGQPGE 399
Query: 379 MMTDPAAVFAVAEDTA--ARYLARVEEERA 462
++ + V A D A AR + R +E+ A
Sbjct: 400 LLINRDGVMEEATDRANRARNVLRQQEQSA 429
[99][TOP]
>UniRef100_Q7U5G7 30S ribosomal protein S1 homolog B, putative Nbp1 n=1
Tax=Synechococcus sp. WH 8102 RepID=Q7U5G7_SYNPX
Length = 406
Score = 117 bits (294), Expect = 4e-25
Identities = 59/147 (40%), Positives = 92/147 (62%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
++LVG L + FI+V+ + +KLV+S + AA A+R LE G +V G V +VKPYG F+D+
Sbjct: 259 QELVGKTLGVAFIEVNSETRKLVLSQKRAAVAARFQELEVGQLVEGVVAAVKPYGLFIDL 318
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GG+SGLLH S I++ ++ I V G V+A + D +GRI L+T +LE PG+++
Sbjct: 319 GGISGLLHQSSITNGSLRSIREVFDQGDRVQALITELDPGRGRIGLNTALLEGPPGELLI 378
Query: 388 DPAAVFAVAEDTAARYLARVEEERAAA 468
+ V A A D A+R + +++ A
Sbjct: 379 EKDKVMAEASDRASRAQSMLKQREQDA 405
[100][TOP]
>UniRef100_B9YN31 RNA binding S1 domain protein n=1 Tax='Nostoc azollae' 0708
RepID=B9YN31_ANAAZ
Length = 301
Score = 117 bits (294), Expect = 4e-25
Identities = 60/144 (41%), Positives = 94/144 (65%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
H+S R+ E L G L F++V+++ KKL++S RLA +S + LE G +V GT+ +
Sbjct: 151 HLS-ERDNLEALKGQTLTAGFLEVNRNTKKLILSERLATRSSNFSLLEVGQLVEGTITGI 209
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KP+G FVD+ GVS LLHI Q+S ++ +E V G ++KA +++ D+ KGR+++ST+VL
Sbjct: 210 KPFGVFVDLEGVSALLHIKQVSQKFIESLEKVFQIGQQIKAVIIDLDQGKGRVAISTRVL 269
Query: 361 EAEPGDMMTDPAAVFAVAEDTAAR 432
E G+++ + A V A AE A R
Sbjct: 270 ENFAGEVVENMAEVMASAEARAHR 293
[101][TOP]
>UniRef100_A5GUD2 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. RCC307
RepID=A5GUD2_SYNR3
Length = 397
Score = 117 bits (293), Expect = 5e-25
Identities = 64/150 (42%), Positives = 96/150 (64%), Gaps = 2/150 (1%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E E LVG + + F++V+ D +KLV+S + AA A+ LE G +VSG V SVKPYG F
Sbjct: 247 ENHEALVGKTVGVAFLEVNPDTRKLVLSEKKAAMAAFFADLEVGQLVSGLVTSVKPYGFF 306
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
VD+GGVSGLLH S I+ ++++ + G ++A + D +GRI L+T +LE +PG+
Sbjct: 307 VDLGGVSGLLHHSCITGGTMRELREIFDSGDSLQALITELDPGRGRIGLNTALLENQPGE 366
Query: 379 MMTDPAAVFAVAEDTA--ARYLARVEEERA 462
++ + AV A A+D A AR + R +E+ A
Sbjct: 367 LLINKEAVMAEAKDRANRARNMLRTQEQGA 396
[102][TOP]
>UniRef100_Q060S3 RNA binding S1 n=1 Tax=Synechococcus sp. BL107 RepID=Q060S3_9SYNE
Length = 412
Score = 117 bits (293), Expect = 5e-25
Identities = 60/150 (40%), Positives = 91/150 (60%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E ++LVG L + F++V+ +KLV+S + A+ A+R LE G +V G V SVKPYG F
Sbjct: 262 ENHQELVGKTLGVAFLEVNSGTRKLVLSEKRASVAARFQELEVGQLVDGLVASVKPYGLF 321
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
+D+GG+SGLLH S I++ ++ I V G V A + + D +GRI L+T +LE PG+
Sbjct: 322 IDLGGISGLLHQSAITNGSLRSIREVFDEGDRVSALITDLDPGRGRIGLNTALLEGPPGE 381
Query: 379 MMTDPAAVFAVAEDTAARYLARVEEERAAA 468
++ D V A A D A R +++ +A
Sbjct: 382 LLIDKDKVMAEASDRATRAQNTLKQNEQSA 411
[103][TOP]
>UniRef100_Q0I8M6 Ribosomal protein S1 n=1 Tax=Synechococcus sp. CC9311
RepID=Q0I8M6_SYNS3
Length = 401
Score = 117 bits (292), Expect = 7e-25
Identities = 61/150 (40%), Positives = 95/150 (63%), Gaps = 2/150 (1%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E E LVG L + F++V+ + +KLV+S + AA A+R + LE G +V G V ++KPYG F
Sbjct: 251 ENHETLVGKTLGVAFLEVNSETRKLVLSEKRAATAARFSELEIGQLVEGHVAAIKPYGLF 310
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
VD+GG+SGLLH S I+ ++ + + G VKA + D +GRI+L+T +LE +PG+
Sbjct: 311 VDLGGISGLLHQSAITGGSMRSMREIFDQGDAVKALITELDPGRGRIALNTAMLEGQPGE 370
Query: 379 MMTDPAAVFAVAEDTA--ARYLARVEEERA 462
++ + V A A D A AR + + +E+ A
Sbjct: 371 LLVEKDKVMAEATDRANRARNVLKQQEQSA 400
[104][TOP]
>UniRef100_Q0QM09 30S ribosomal protein S1-like protein B n=1 Tax=uncultured marine
type-A Synechococcus 5B2 RepID=Q0QM09_9SYNE
Length = 411
Score = 117 bits (292), Expect = 7e-25
Identities = 60/150 (40%), Positives = 93/150 (62%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E ++LVG L + FI+V+ + +KLV+S + AA A+R LE G +V G V +VKPYG F
Sbjct: 261 ENHQELVGKTLGVAFIEVNSETRKLVLSEKRAAIAARFQELEIGQLVEGLVAAVKPYGLF 320
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
+D+GG+SGLLH S I++ ++ I V G V A + D +GRI L+T +LE PG+
Sbjct: 321 IDLGGISGLLHQSAITNGSLRSIREVFDQGDRVHALITELDPARGRIGLNTALLEGPPGE 380
Query: 379 MMTDPAAVFAVAEDTAARYLARVEEERAAA 468
++ + V A A D A+R + ++++ A
Sbjct: 381 LLVEKDKVMAEASDRASRAQSLLKQQEQDA 410
[105][TOP]
>UniRef100_Q05RJ7 Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9916
RepID=Q05RJ7_9SYNE
Length = 439
Score = 117 bits (292), Expect = 7e-25
Identities = 64/150 (42%), Positives = 95/150 (63%), Gaps = 2/150 (1%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E E LVG L + F++V+ + +KLV+S + AA A+R + LE G +V G V +VKPYG F
Sbjct: 289 ENHESLVGKTLGVAFLEVNSETRKLVLSEKRAATAARFSELEVGQLVEGHVVAVKPYGFF 348
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
VD+GG+SGLLH S I+ ++ + V G VKA + D +GRI+L+T +LE +PG+
Sbjct: 349 VDLGGISGLLHQSVITGGSLRSLREVFDHGDLVKALITELDPGRGRIALNTAMLEGQPGE 408
Query: 379 MMTDPAAVFAVAEDTA--ARYLARVEEERA 462
++ + V A A D A AR + R +E+ A
Sbjct: 409 LLVEKDKVMAEAVDRANRARNVLRQQEQSA 438
[106][TOP]
>UniRef100_B7K791 RNA binding S1 domain protein n=1 Tax=Cyanothece sp. PCC 7424
RepID=B7K791_CYAP7
Length = 284
Score = 116 bits (291), Expect = 9e-25
Identities = 64/154 (41%), Positives = 90/154 (58%)
Frame = +1
Query: 10 VRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPY 189
V +E + LVG + FIQVD D KLV+S R A+ M+ L GT+V G V ++PY
Sbjct: 137 VEKEDLDSLVGQSITANFIQVDPDNNKLVLSQRQLVRAAAMSQLTIGTLVEGKVAKIQPY 196
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
G FVDI G +GLLHI+Q+S H+ + + G +K ++ D+ K RI+LSTKVLE+
Sbjct: 197 GVFVDINGATGLLHITQVSGVHIDALTTIFKIGQTIKVMIVEIDEYKNRIALSTKVLESY 256
Query: 370 PGDMMTDPAAVFAVAEDTAARYLARVEEERAAAS 471
PG+++ V A AE+ RVE+ R S
Sbjct: 257 PGEIVEKFDEVMANAEE-------RVEQAREKLS 283
[107][TOP]
>UniRef100_Q46GP7 SSU ribosomal protein S1P n=1 Tax=Prochlorococcus marinus str.
NATL2A RepID=Q46GP7_PROMT
Length = 431
Score = 116 bits (290), Expect = 1e-24
Identities = 56/157 (35%), Positives = 93/157 (59%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E + LV + F++V+ + +KLV+S + AA ASR + LE G ++ G + ++KPYG F
Sbjct: 271 ENHQSLVSKTISTAFLEVNPERRKLVLSEKKAAIASRFSELEIGQLIEGEILTIKPYGFF 330
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
VD+ GVSGLLH S +++ ++ + V PG +KA + + D +GRI L+T +LE PG+
Sbjct: 331 VDLRGVSGLLHHSMVTNGSMRSLREVFQPGESIKALITDLDPSRGRIGLNTALLEGPPGE 390
Query: 379 MMTDPAAVFAVAEDTAARYLARVEEERAAASSVADDI 489
++TD V A + A + + +E+ +DI
Sbjct: 391 LITDKTKVMEEANERAIKARNSLNKEKVDPQKEKEDI 427
[108][TOP]
>UniRef100_A2C0Y8 30S ribosomal protein S1 protein B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. NATL1A
RepID=A2C0Y8_PROM1
Length = 465
Score = 116 bits (290), Expect = 1e-24
Identities = 56/157 (35%), Positives = 93/157 (59%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E + LV + F++V+ + +KLV+S + AA ASR + LE G ++ G + ++KPYG F
Sbjct: 305 ENHQSLVSKTISTAFLEVNPERRKLVLSEKKAAIASRFSELEIGQLIEGEILTIKPYGFF 364
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
VD+ GVSGLLH S +++ ++ + V PG +KA + + D +GRI L+T +LE PG+
Sbjct: 365 VDLRGVSGLLHHSMVTNGSMRSLREVFQPGESIKALITDLDPSRGRIGLNTALLEGPPGE 424
Query: 379 MMTDPAAVFAVAEDTAARYLARVEEERAAASSVADDI 489
++TD V A + A + + +E+ +DI
Sbjct: 425 LITDKTKVMEEANERAIKARNSLNKEKVDPQKEKEDI 461
[109][TOP]
>UniRef100_D0CHB9 SSU ribosomal protein S1P n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CHB9_9SYNE
Length = 390
Score = 116 bits (290), Expect = 1e-24
Identities = 59/150 (39%), Positives = 91/150 (60%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E ++ VG L + FI+V+ + +KLV+S + AA A R LE G +V G V +VKPYG F
Sbjct: 240 ENHQEFVGKTLGVAFIEVNSETRKLVLSEKRAAVAERFQDLEVGQLVEGQVAAVKPYGLF 299
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
+D+GG+SGLLH S I++ ++ I V G V A + D +GRI L+T +LE PG+
Sbjct: 300 IDLGGISGLLHQSAITNGSLRSIREVFDQGDRVSALITELDPGRGRIGLNTALLEGPPGE 359
Query: 379 MMTDPAAVFAVAEDTAARYLARVEEERAAA 468
++ + V A A D A+R ++++ +A
Sbjct: 360 LLIEKDKVMAEAADRASRAQNTLKQQEQSA 389
[110][TOP]
>UniRef100_Q4C3R0 RNA binding S1 n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4C3R0_CROWT
Length = 313
Score = 115 bits (289), Expect = 2e-24
Identities = 61/149 (40%), Positives = 91/149 (61%)
Frame = +1
Query: 10 VRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPY 189
+ +E LVG L F++V+Q KLV+S R A AA+R+ LE G +VSG V ++PY
Sbjct: 162 MEKEDLNGLVGQLLTATFLEVNQSTNKLVLSQRRAIAAARIDKLEVGQLVSGKVARIQPY 221
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
G FVD GVSGLLHI+Q+S V D+ V E+K +++ D+ K RI+LSTK+LE
Sbjct: 222 GIFVDFEGVSGLLHITQVSGSRVDDLNHVFKYNQEIKVMILSIDEYKNRIALSTKILENH 281
Query: 370 PGDMMTDPAAVFAVAEDTAARYLARVEEE 456
PG+++ + V A+ + ++E+E
Sbjct: 282 PGEIIENLEEVMKTADARVEQAREKMEKE 310
[111][TOP]
>UniRef100_B8HSI0 RNA binding S1 domain protein n=1 Tax=Cyanothece sp. PCC 7425
RepID=B8HSI0_CYAP4
Length = 292
Score = 113 bits (283), Expect = 8e-24
Identities = 59/145 (40%), Positives = 86/145 (59%)
Frame = +1
Query: 10 VRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPY 189
V E E LVG L + ++ D + K+LV S ++A R+ + G +V GTVR ++PY
Sbjct: 142 VGAETLESLVGQTLTVTILEADPERKRLVCSQKIARRQQRLQEFDYGQLVQGTVRDIRPY 201
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
G +D+ GV GLLHI+ S V ++A + G +KA V N D ++GRISLST++LE
Sbjct: 202 GLMIDLTGVLGLLHINDFSEKRVGSLQAHVQVGTPIKAIVTNLDAERGRISLSTRLLENR 261
Query: 370 PGDMMTDPAAVFAVAEDTAARYLAR 444
PG+M+ V A AE+ A R A+
Sbjct: 262 PGEMLDAFDHVMAEAEERADRMAAK 286
[112][TOP]
>UniRef100_A3IGN9 30S ribosomal protein S1 n=1 Tax=Cyanothece sp. CCY0110
RepID=A3IGN9_9CHRO
Length = 304
Score = 113 bits (283), Expect = 8e-24
Identities = 61/149 (40%), Positives = 88/149 (59%)
Frame = +1
Query: 10 VRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPY 189
+ +E LVG L F++V+ KLV+S R A AA+RM LE G +VSG V ++PY
Sbjct: 153 LEKEDLNALVGQMLTATFLEVNPSTNKLVLSQRKAIAAARMDKLEAGQLVSGKVSRIQPY 212
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
G FVD GVSGLLHI+Q+S V D+ + ++K +++ D+ K RI+LSTK+LE
Sbjct: 213 GVFVDFEGVSGLLHITQVSGSRVDDLNHIFKYNQDIKVMILSIDEYKNRIALSTKILENY 272
Query: 370 PGDMMTDPAAVFAVAEDTAARYLARVEEE 456
PG+MM V A+ + +E+E
Sbjct: 273 PGEMMEKFDEVMKTADARVDKAKEAMEKE 301
[113][TOP]
>UniRef100_Q2JN47 Putative ribosomal protein S1 n=1 Tax=Synechococcus sp.
JA-2-3B'a(2-13) RepID=Q2JN47_SYNJB
Length = 304
Score = 113 bits (282), Expect = 1e-23
Identities = 60/153 (39%), Positives = 92/153 (60%), Gaps = 1/153 (0%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
H+S +RE E+LVG L FI+V+ + KLV+S R A + ++ +G VV G V +
Sbjct: 149 HLS-QREGLEELVGQSLTASFIEVNPEANKLVLSQRAAVKSENLSRYTSGQVVEGKVSGL 207
Query: 181 KPYGAFVDIG-GVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKV 357
KP+G FVD+ GV+GLLHI Q+S V + + PG +KA V++ D+ KGR++LS +V
Sbjct: 208 KPFGVFVDLEEGVTGLLHIKQVSQSFVASLPDLFKPGQRIKAVVIDVDEAKGRMALSLRV 267
Query: 358 LEAEPGDMMTDPAAVFAVAEDTAARYLARVEEE 456
LE PG+++ V AE+ A + R+ +
Sbjct: 268 LEKHPGEVLEQLDRVMEEAEERAGKLKGRITSD 300
[114][TOP]
>UniRef100_O33698 30S ribosomal protein S1 n=2 Tax=Synechococcus elongatus
RepID=RS1_SYNE7
Length = 295
Score = 113 bits (282), Expect = 1e-23
Identities = 60/147 (40%), Positives = 93/147 (63%)
Frame = +1
Query: 16 REAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGA 195
+E + L G L + F++V++ +KKLV+S R AA + + +E G +++G V +KP+G
Sbjct: 149 KEDLDSLKGKTLTVAFLEVNRADKKLVLSERQAARTALVREIEVGQLINGKVTGLKPFGV 208
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
FVD+GG + LL I+QIS V D+ A+ G ++A V+ D KGRISLSTKVLE PG
Sbjct: 209 FVDLGGATALLPINQISQKFVADVGAIFKIGDPIQALVVAIDNTKGRISLSTKVLENHPG 268
Query: 376 DMMTDPAAVFAVAEDTAARYLARVEEE 456
+++ + A + A A D A R ++E +
Sbjct: 269 EILENVAELQASAADRAERARKQLESQ 295
[115][TOP]
>UniRef100_C7QUH8 RNA binding S1 domain protein n=2 Tax=Cyanothece RepID=C7QUH8_CYAP0
Length = 302
Score = 112 bits (281), Expect = 1e-23
Identities = 56/149 (37%), Positives = 92/149 (61%)
Frame = +1
Query: 10 VRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPY 189
+ ++ + LVG L F++V+ D+ KLV+S R A++M + G +++G V ++PY
Sbjct: 153 LEKDNLDALVGQLLTANFLEVNPDDNKLVLSQRRVIMAAQMDKITAGNLITGKVAKIQPY 212
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
G FVD+ GV+GLLHI+QIS + D+ + G E++ ++N D+ KGRISLSTKVLE
Sbjct: 213 GIFVDLNGVTGLLHITQISGLRIDDLNTLFKFGQEIQVMILNIDEYKGRISLSTKVLENY 272
Query: 370 PGDMMTDPAAVFAVAEDTAARYLARVEEE 456
PG+++ V A + L ++++E
Sbjct: 273 PGEILEQFDEVMKTASARVEQALEKLQKE 301
[116][TOP]
>UniRef100_B4W413 S1 RNA binding domain protein n=1 Tax=Microcoleus chthonoplastes
PCC 7420 RepID=B4W413_9CYAN
Length = 299
Score = 112 bits (279), Expect = 2e-23
Identities = 56/140 (40%), Positives = 87/140 (62%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
E L+G L + ++ D+D KLV S R A A+ + LE G +V GTV +++P+G FV++
Sbjct: 159 ESLIGQSLTVSILEADRDRSKLVFSQREATRAASFSMLEVGQLVEGTVSNIRPFGVFVEL 218
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
G++GLLHI Q+S + V+ + + G +KA V++ D+ R+SLSTKVLE PG+M+
Sbjct: 219 EGITGLLHIKQVSQNMVESLTDMFEVGQSIKAIVIDLDEGTNRVSLSTKVLENYPGEMVH 278
Query: 388 DPAAVFAVAEDTAARYLARV 447
A V AE + R A++
Sbjct: 279 KMADVMESAEARSERARAKM 298
[117][TOP]
>UniRef100_B1WY16 30S ribosomal protein S1 n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WY16_CYAA5
Length = 302
Score = 111 bits (278), Expect = 3e-23
Identities = 59/149 (39%), Positives = 89/149 (59%)
Frame = +1
Query: 10 VRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPY 189
+ +E LVG L F++V+ KLV+S R A AA+RM LE G +V+G V ++PY
Sbjct: 153 LEKEDLNSLVGQLLTATFLEVNPSTNKLVLSQRKAIAAARMDKLEAGQLVTGKVSRIQPY 212
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
G FVD GVSGLLHI+Q+S V D+ + ++K +++ D+ K RI+LSTK+LE
Sbjct: 213 GVFVDFEGVSGLLHITQVSGSRVDDLNHLFKYNQDIKVMILSIDEYKNRIALSTKILENY 272
Query: 370 PGDMMTDPAAVFAVAEDTAARYLARVEEE 456
PG+M+ V A+ + ++E+E
Sbjct: 273 PGEMIEKFDEVMKTADARVEQAREKMEKE 301
[118][TOP]
>UniRef100_Q111W5 SSU ribosomal protein S1P n=1 Tax=Trichodesmium erythraeum IMS101
RepID=Q111W5_TRIEI
Length = 304
Score = 111 bits (277), Expect = 4e-23
Identities = 57/139 (41%), Positives = 88/139 (63%)
Frame = +1
Query: 16 REAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGA 195
R+ E L+ L + F+++DQ++KK+V+S RLA ++ + L G ++ G V VKP+G
Sbjct: 157 RDNLESLIDQVLTVNFLELDQEKKKIVMSQRLATQSAGFSKLAVGQLLEGKVVGVKPFGV 216
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
FVD+ G++GLLHI+Q+S V + + S G VKA +++ D+ + RISLSTKVLE PG
Sbjct: 217 FVDLEGLTGLLHITQVSQKRVDSLSTIFSQGNLVKAMIVDLDEGRKRISLSTKVLENYPG 276
Query: 376 DMMTDPAAVFAVAEDTAAR 432
+M+ V A+ A R
Sbjct: 277 EMLEKIDEVMESADARAER 295
[119][TOP]
>UniRef100_B2IT95 RNA binding S1 domain protein n=1 Tax=Nostoc punctiforme PCC 73102
RepID=B2IT95_NOSP7
Length = 300
Score = 110 bits (276), Expect = 5e-23
Identities = 54/139 (38%), Positives = 87/139 (62%)
Frame = +1
Query: 16 REAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGA 195
R+ + L G L + F++++++ KL++S RLA +S + LE G +V G V +KP+G
Sbjct: 155 RDNLDALKGQNLTVGFLEINKNTNKLILSQRLATRSSNFSLLELGQLVEGKVTGIKPFGV 214
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
FVD+ G+ LLHI Q+S + +E V G +KA +++ D+ KGR++LST+VLE PG
Sbjct: 215 FVDLNGMGALLHIKQVSQKFIDSLEKVFKVGQPIKAVIIDLDEGKGRVALSTRVLENFPG 274
Query: 376 DMMTDPAAVFAVAEDTAAR 432
+++ + V A AE A R
Sbjct: 275 EVLENMDEVMASAEARANR 293
[120][TOP]
>UniRef100_A0ZM63 30S ribosomal protein S1 n=1 Tax=Nodularia spumigena CCY9414
RepID=A0ZM63_NODSP
Length = 284
Score = 110 bits (276), Expect = 5e-23
Identities = 54/139 (38%), Positives = 89/139 (64%)
Frame = +1
Query: 16 REAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGA 195
R+ E L G L + F++++++ KL++S RLA +S + L+ +V G V +KP+G
Sbjct: 139 RDNLEALKGQSLTVAFLEINRNTNKLILSQRLATRSSSFSLLQLNQLVEGRVTGIKPFGI 198
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
FVD+ G+S LLHI Q+S +++ +E V G +KA +++ D+ KGR+++ST+VLE PG
Sbjct: 199 FVDLDGLSALLHIKQVSQKYIESLEKVFQIGQTIKAVIIDLDEGKGRVAISTRVLENFPG 258
Query: 376 DMMTDPAAVFAVAEDTAAR 432
+M+ + V A AE A R
Sbjct: 259 EMLENFDEVMASAEARANR 277
[121][TOP]
>UniRef100_B1XJQ5 30S ribosomal protein S1 like protein n=1 Tax=Synechococcus sp. PCC
7002 RepID=B1XJQ5_SYNP2
Length = 296
Score = 108 bits (270), Expect = 3e-22
Identities = 58/131 (44%), Positives = 85/131 (64%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
+DL+G L + F++ DQ+ +KLV+S R AA A M L G +VSGTV ++KPYG FV++
Sbjct: 154 DDLMGQLLTVNFLEFDQERRKLVLSQRYAAQAEVMRRLSIGALVSGTVVNIKPYGVFVEL 213
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
G++GLLH SQIS V+ IEA+ S G V+ + + ++ RISLS + LE PG+++
Sbjct: 214 DGMTGLLHRSQISAKPVEQIEALFSIGQTVRVLITDIEESNNRISLSLQALEKFPGEVIE 273
Query: 388 DPAAVFAVAED 420
AV AE+
Sbjct: 274 QFDAVQTNAEE 284
[122][TOP]
>UniRef100_A2BQ11 30S ribosomal protein S1 protein B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. AS9601
RepID=A2BQ11_PROMS
Length = 401
Score = 107 bits (267), Expect = 6e-22
Identities = 52/143 (36%), Positives = 88/143 (61%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
+ VG L + F++V+ + +KLV+S + A+ S++TSLE G ++ G V +VKPYG F+D+
Sbjct: 255 QSFVGKNLKVAFLEVNPESRKLVLSEKKASLVSKLTSLELGQLIEGEVLAVKPYGFFIDL 314
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GG SGLLH S +++ ++ + V G +KA + D +KGRI L+T +LE G+++
Sbjct: 315 GGASGLLHQSSLTNGSIRSLREVFREGEVIKALISEIDLEKGRIGLNTALLENSAGELII 374
Query: 388 DPAAVFAVAEDTAARYLARVEEE 456
D V A + A + A +++
Sbjct: 375 DKQKVMQEATERALKTKALFDKK 397
[123][TOP]
>UniRef100_Q10MB3 30S ribosomal protein S1, chloroplast, putative, expressed n=1
Tax=Oryza sativa Japonica Group RepID=Q10MB3_ORYSJ
Length = 380
Score = 107 bits (267), Expect = 6e-22
Identities = 60/151 (39%), Positives = 90/151 (59%)
Frame = +1
Query: 16 REAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGA 195
+ E+L+ ELPLKF++VD+++ +LV+S+R A A S+ L G+VV GTV S+KPYGA
Sbjct: 212 KSTAEELLDKELPLKFVEVDEEQGRLVLSNRKAMADSQ-AQLGIGSVVLGTVESLKPYGA 270
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
F+DI VL PG +K +++ D+++GR+SLSTK LE PG
Sbjct: 271 FIDI----------------------VLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPG 308
Query: 376 DMMTDPAAVFAVAEDTAARYLARVEEERAAA 468
DM+ +P VF A++ A + R+ + A A
Sbjct: 309 DMIRNPKLVFEKADEMAQIFRQRIAQAEAMA 339
[124][TOP]
>UniRef100_A3PBQ4 30S ribosomal protein S1-like protein B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. MIT 9301
RepID=A3PBQ4_PROM0
Length = 401
Score = 107 bits (266), Expect = 7e-22
Identities = 52/143 (36%), Positives = 88/143 (61%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
+ VG L + F++V+ + +KLV+S + A+ S++TSLE G ++ G V +VKPYG F+D+
Sbjct: 255 QSFVGKTLKVAFLEVNPESRKLVLSEKKASLVSKLTSLELGQLIEGEVLAVKPYGFFIDL 314
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GG SGLLH S +++ ++ + V G +KA + D +KGRI L+T +LE G+++
Sbjct: 315 GGASGLLHQSSLTNGSIRSLREVFREGEMIKALISEIDLEKGRIGLNTALLENSAGELII 374
Query: 388 DPAAVFAVAEDTAARYLARVEEE 456
D V A + A + A +++
Sbjct: 375 DKQKVMQEATERALKTKALFDKK 397
[125][TOP]
>UniRef100_B9P0S4 RNA binding S1 n=1 Tax=Prochlorococcus marinus str. MIT 9202
RepID=B9P0S4_PROMA
Length = 401
Score = 107 bits (266), Expect = 7e-22
Identities = 52/143 (36%), Positives = 88/143 (61%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
+ VG L + F++V+ + +KLV+S + A+ S++TSLE G ++ G V +VKPYG F+D+
Sbjct: 255 QSFVGKTLKVAFLEVNPESRKLVLSEKKASLVSKLTSLELGQLIEGEVLAVKPYGFFIDL 314
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GG SGLLH S +++ ++ + V G +KA + D +KGRI L+T +LE G+++
Sbjct: 315 GGASGLLHQSSLTNGSIRSLREVFREGEMIKALISEIDLEKGRIGLNTALLENSAGELII 374
Query: 388 DPAAVFAVAEDTAARYLARVEEE 456
D V A + A + A +++
Sbjct: 375 DKQKVMQEATERALKTKALFDKK 397
[126][TOP]
>UniRef100_B0JPE8 Nucleic acid-binding protein n=1 Tax=Microcystis aeruginosa
NIES-843 RepID=B0JPE8_MICAN
Length = 293
Score = 106 bits (265), Expect = 1e-21
Identities = 58/147 (39%), Positives = 85/147 (57%)
Frame = +1
Query: 10 VRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPY 189
+ + + L+G L FIQ+DQ+ KLV+S R A A+ ++ L G ++SGTV ++PY
Sbjct: 145 IEKNDLDSLIGQLLTATFIQIDQENNKLVLSQREIARANAISQLAVGKLLSGTVVKLQPY 204
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
G FVD GGV+GLLH Q++ G +K V D+ K RISLSTK+LEA
Sbjct: 205 GVFVDCGGVTGLLHAKQVTGASFNSPMTFFKVGQAIKVVVAEIDEYKNRISLSTKILEAH 264
Query: 370 PGDMMTDPAAVFAVAEDTAARYLARVE 450
PG+++ + FA +TAA L + +
Sbjct: 265 PGEILEN----FAEVMETAAERLKQAQ 287
[127][TOP]
>UniRef100_Q31C04 SSU ribosomal protein S1P n=1 Tax=Prochlorococcus marinus str. MIT
9312 RepID=Q31C04_PROM9
Length = 404
Score = 105 bits (263), Expect = 2e-21
Identities = 51/143 (35%), Positives = 87/143 (60%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
+ VG L + F++V+ + +KLV+S + A+ S++TSL+ G ++ G V +VKPYG F+D+
Sbjct: 258 QSFVGKTLKVAFLEVNPESRKLVLSEKKASLVSKLTSLDLGQLIEGEVLAVKPYGFFIDL 317
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GG SGLLH S ++ ++ + + G +KA + D +KGRI L+T +LE G+++
Sbjct: 318 GGASGLLHQSSLTKGSIRSLREIFREGEIIKALISEIDLEKGRIGLNTALLENSAGELII 377
Query: 388 DPAAVFAVAEDTAARYLARVEEE 456
D V A D A + A +++
Sbjct: 378 DKEKVMREATDRALKTKALFDKK 400
[128][TOP]
>UniRef100_A8G3P5 Ribosomal protein S1 n=1 Tax=Prochlorococcus marinus str. MIT 9215
RepID=A8G3P5_PROM2
Length = 400
Score = 105 bits (263), Expect = 2e-21
Identities = 51/143 (35%), Positives = 88/143 (61%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
+ VG L + F++V+ + +KLV+S + A+ S++T+LE G ++ G V +VKPYG F+D+
Sbjct: 254 QSFVGKTLKVAFLEVNPESRKLVLSEKKASLVSKLTNLELGQLIEGEVLAVKPYGFFIDL 313
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GG SGLLH S +++ ++ + V G +KA + D +KGRI L+T +LE G+++
Sbjct: 314 GGASGLLHQSSLTNGSIRSLREVFREGEMIKALISEIDLEKGRIGLNTALLENSAGELII 373
Query: 388 DPAAVFAVAEDTAARYLARVEEE 456
D V A + A + A +++
Sbjct: 374 DKQKVMQEATERALKTKALFDKK 396
[129][TOP]
>UniRef100_A8YAJ6 Similar to tr|Q4C3R0|Q4C3R0_CROWT RNA binding S1 n=1
Tax=Microcystis aeruginosa PCC 7806 RepID=A8YAJ6_MICAE
Length = 293
Score = 105 bits (261), Expect = 3e-21
Identities = 57/147 (38%), Positives = 85/147 (57%)
Frame = +1
Query: 10 VRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPY 189
+ + + L+G L FIQ+DQ+ KLV+S R A A+ ++ L G ++SGTV ++PY
Sbjct: 145 IEKNDLDSLIGQLLTATFIQIDQENNKLVLSQREIARANAISQLAVGKLLSGTVVKLQPY 204
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
G FVD GGV+GLLH Q++ G ++ V D+ K RISLSTK+LEA
Sbjct: 205 GVFVDCGGVTGLLHAKQVTGASFNSPMTFFKVGQAIQVVVAEIDEYKNRISLSTKILEAH 264
Query: 370 PGDMMTDPAAVFAVAEDTAARYLARVE 450
PG+++ + FA +TAA L + +
Sbjct: 265 PGEILEN----FAEVMETAAERLKQAQ 287
[130][TOP]
>UniRef100_A9B766 RNA binding S1 domain protein n=1 Tax=Herpetosiphon aurantiacus
ATCC 23779 RepID=A9B766_HERA2
Length = 397
Score = 103 bits (258), Expect = 6e-21
Identities = 53/127 (41%), Positives = 77/127 (60%), Gaps = 7/127 (5%)
Frame = +1
Query: 13 RREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMT-------SLETGTVVSGTV 171
++ A +VG +PLK I+VD+D +LV+S R A R + +LE G VV+G V
Sbjct: 158 QQSAMTKMVGQNIPLKVIEVDRDRNRLVLSERAAMQRWRQSQKERLLETLEPGAVVTGRV 217
Query: 172 RSVKPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLST 351
+ P+GAF+D+GG GL HIS++S V VL PG EV+ YV+ D+D+ RI LS
Sbjct: 218 NQLTPFGAFIDLGGADGLAHISELSWQRVNHPREVLQPGQEVQVYVLEVDRDRERIGLSL 277
Query: 352 KVLEAEP 372
+ L+ +P
Sbjct: 278 RRLQPDP 284
[131][TOP]
>UniRef100_A2BVJ2 30S ribosomal protein S1 protein B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. MIT 9515
RepID=A2BVJ2_PROM5
Length = 408
Score = 103 bits (257), Expect = 8e-21
Identities = 49/143 (34%), Positives = 86/143 (60%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
+ LV L + F++V+ + +KLV+S + A S+ + L+ G ++ G V +KPYG FVD+
Sbjct: 259 QSLVNKTLKVAFLEVNPESRKLVLSEKKALLVSKFSGLKLGQLIEGEVLGIKPYGFFVDL 318
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GG SGLLH S I++ ++++ + G +KA + D ++GRI L+T +LE PG+++
Sbjct: 319 GGASGLLHQSSITNGSIRNLREIFEEGELIKALITEIDLERGRIGLNTALLENSPGELIV 378
Query: 388 DPAAVFAVAEDTAARYLARVEEE 456
D V A + A + A +++
Sbjct: 379 DKGKVMLEASERALKAKALFDKK 401
[132][TOP]
>UniRef100_Q2JV37 Putative ribosomal protein S1 n=1 Tax=Synechococcus sp. JA-3-3Ab
RepID=Q2JV37_SYNJA
Length = 304
Score = 102 bits (255), Expect = 1e-20
Identities = 57/149 (38%), Positives = 87/149 (58%), Gaps = 1/149 (0%)
Frame = +1
Query: 13 RREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYG 192
+RE E+LVG L ++V+ KLV+S R+A A + TG VV G V ++KP+G
Sbjct: 152 QRENLEELVGQSLTASLLEVNPAANKLVLSQRVARQAESLGIYTTGQVVRGKVSALKPFG 211
Query: 193 AFVDIG-GVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
FV++ G SGLL I Q+S V + + PG +KA V++ D+ KGR++LS +VLE
Sbjct: 212 VFVELEEGGSGLLPIKQVSQSFVASLSDLFQPGQPLKAVVIDVDEAKGRVALSLRVLEKY 271
Query: 370 PGDMMTDPAAVFAVAEDTAARYLARVEEE 456
PG+++ A + AE+ A + R+ E
Sbjct: 272 PGEVLEQLALITEEAEERAGKLKGRITSE 300
[133][TOP]
>UniRef100_A0YL26 RNA binding S1 n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YL26_9CYAN
Length = 295
Score = 102 bits (253), Expect = 2e-20
Identities = 53/144 (36%), Positives = 87/144 (60%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSV 180
H+S +E L+ L + +++D+D KLV S RLA+ + LE G ++ G V SV
Sbjct: 145 HLS-EKEDLNSLIDQLLTVHILELDRDRNKLVFSQRLASESVSFGQLEVGQLIEGKVSSV 203
Query: 181 KPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
KP+G FVD+ GV+GL+HI ++S +++ + + G VKA V++ ++ + R+SLST++L
Sbjct: 204 KPFGVFVDLDGVTGLIHIKEVSQKYIESLPTLFPVGQAVKALVIDLEEGRRRVSLSTRLL 263
Query: 361 EAEPGDMMTDPAAVFAVAEDTAAR 432
E PG+++ V AE A R
Sbjct: 264 ENYPGEIVEKFPEVMDSAEARAER 287
[134][TOP]
>UniRef100_B1X5T4 30S ribosomal protein S1-like B, putative n=1 Tax=Paulinella
chromatophora RepID=B1X5T4_PAUCH
Length = 368
Score = 102 bits (253), Expect = 2e-20
Identities = 53/148 (35%), Positives = 86/148 (58%), Gaps = 2/148 (1%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E E +VG + I+V+ +KL++S + A A+R L+ G ++ G V VKPYG F
Sbjct: 218 ENYEKMVGKTIRAALIEVNSSSQKLILSEKRATTATRFAQLQIGQLIEGQVTVVKPYGFF 277
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
VDIG ++GLLH S I++ ++++ + G +KA + + D +GRI L+T +LE +PG+
Sbjct: 278 VDIGSINGLLHYSCITNGNLREPNKIFKQGERIKALITDLDPTRGRIGLNTALLEGKPGE 337
Query: 379 MMTDPAAVFAVAEDTA--ARYLARVEEE 456
++ V A D AR L R +E+
Sbjct: 338 LLIQKEKVMNEATDRTIMARNLIRQKEQ 365
[135][TOP]
>UniRef100_B5VV11 RNA binding S1 domain protein n=1 Tax=Arthrospira maxima CS-328
RepID=B5VV11_SPIMA
Length = 294
Score = 101 bits (251), Expect = 4e-20
Identities = 50/139 (35%), Positives = 89/139 (64%)
Frame = +1
Query: 16 REAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGA 195
R+ E LVG + + ++ ++D +KLV+S R+A+ + + L+ G +V GTV S+KP+G
Sbjct: 149 RDNLEALVGETITVTVLEFNRDREKLVLSQRMASQSVSFSQLQVGQLVEGTVGSIKPFGV 208
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
F+++ GV+GL+HI ++S +V + + + G VKA V++ ++ + R+SLST++LE PG
Sbjct: 209 FIELEGVTGLIHIKEVSQKYVGSLPDIFTIGQTVKALVISLEEGRQRVSLSTRLLENYPG 268
Query: 376 DMMTDPAAVFAVAEDTAAR 432
+++ V AE A R
Sbjct: 269 EIVDKFPEVMDSAEARAER 287
[136][TOP]
>UniRef100_C7TCE1 30S ribosomal protein S1 n=4 Tax=Lactobacillus rhamnosus
RepID=C7TCE1_LACRG
Length = 436
Score = 101 bits (251), Expect = 4e-20
Identities = 55/138 (39%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPYGAF 198
G EL K I+++ E +L++SHR AS+ ++ G VV G V + +GAF
Sbjct: 160 GKELEFKIIEIEPSENRLILSHRAIVEASKAEARKEIFAKIQPGDVVEGKVARLTNFGAF 219
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
VD+GGV GL+H+S+IS DHV VL G E+K V+N D D+ RISLS K +P D
Sbjct: 220 VDLGGVDGLVHVSEISFDHVDKPSDVLKVGQEIKVKVLNVDPDRNRISLSIKATLPQPWD 279
Query: 379 MMTDPAAVFAVAEDTAAR 432
+ + A +V T R
Sbjct: 280 DIEEKAPAGSVLTGTVKR 297
Score = 80.5 bits (197), Expect = 7e-14
Identities = 47/117 (40%), Positives = 70/117 (59%), Gaps = 5/117 (4%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLE----TGTVVSGTVRSVKPYGAFVD 204
VG E+ +K + VD D ++ +S + A +E G+V++GTV+ + +GAFV+
Sbjct: 248 VGQEIKVKVLNVDPDRNRISLSIK-ATLPQPWDDIEEKAPAGSVLTGTVKRLTTFGAFVE 306
Query: 205 I-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEP 372
+ GV GL+HISQISH+HV VL G EVK V++ D D R++LS K L+ P
Sbjct: 307 VFPGVEGLVHISQISHEHVATPADVLKEGQEVKVKVLSVDPDAHRLALSIKALQDRP 363
[137][TOP]
>UniRef100_Q7V2F0 30S ribosomal protein S1 homolog B, putative Nbp1 n=1
Tax=Prochlorococcus marinus subsp. pastoris str.
CCMP1986 RepID=Q7V2F0_PROMP
Length = 405
Score = 100 bits (249), Expect = 7e-20
Identities = 47/135 (34%), Positives = 82/135 (60%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
+ LV L + F++V+ + +KLV+S + A S+ L+ G ++ G V ++KPYG FVD+
Sbjct: 259 QSLVSKNLKVAFLEVNPETRKLVLSEKKALLVSKFADLKFGQLIEGEVLAIKPYGFFVDL 318
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GG SGLLH S I++ ++++ + G +KA + D ++GRI L+T +LE PG+++
Sbjct: 319 GGASGLLHQSSITNGSIRNLREIFREGEVIKALITEIDLERGRIGLNTALLENTPGELII 378
Query: 388 DPAAVFAVAEDTAAR 432
D V A + + +
Sbjct: 379 DKEKVMIEASERSLK 393
[138][TOP]
>UniRef100_C4FR40 Putative uncharacterized protein n=1 Tax=Veillonella dispar ATCC
17748 RepID=C4FR40_9FIRM
Length = 632
Score = 100 bits (248), Expect = 9e-20
Identities = 60/170 (35%), Positives = 89/170 (52%), Gaps = 7/170 (4%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRL-------AAAASRMTSLETGTVVSGTVRSVKP 186
++LVG E K +++D+ + +LV+S R A A + ++ G G VR + P
Sbjct: 418 DNLVGTEFEAKVLEIDEKKNRLVLSRRAVLEVERQAKLAEALKNINVGDNYKGIVRKIMP 477
Query: 187 YGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEA 366
YGAFVDIGG+ GLLHIS IS +K +E VLS G E++ + + D + ++SLS K L
Sbjct: 478 YGAFVDIGGIEGLLHISDISWQKIKKVEDVLSVGQEIEVKLQSFDAESNKLSLSLKALSK 537
Query: 367 EPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASSVADDIVSSLDIASL 516
P D+ + V V R +A A +V DDI L I+ +
Sbjct: 538 SPWDVAEETLHVGDVINGKVVRLVA-----YGAFVAVNDDIQGLLHISQI 582
Score = 59.3 bits (142), Expect = 2e-07
Identities = 38/116 (32%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLET---GTVVSGTVRSVKPYGAFVDI 207
VG E+ +K D + KL +S + + + + ET G V++G V + YGAFV +
Sbjct: 510 VGQEIEVKLQSFDAESNKLSLSLKALSKSPWDVAEETLHVGDVINGKVVRLVAYGAFVAV 569
Query: 208 GG-VSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLS-TKVLEAE 369
+ GLLHISQI+ +E L+ G EV+ +++ +KD+ ++ L+ T+++EA+
Sbjct: 570 NDDIQGLLHISQITKQRNAKVEDYLNRGQEVEVKIISLNKDEKKLGLALTELMEAK 625
[139][TOP]
>UniRef100_C2AWN0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal
protein S1P n=1 Tax=Veillonella parvula DSM 2008
RepID=C2AWN0_9FIRM
Length = 632
Score = 100 bits (248), Expect = 9e-20
Identities = 60/170 (35%), Positives = 89/170 (52%), Gaps = 7/170 (4%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRL-------AAAASRMTSLETGTVVSGTVRSVKP 186
++LVG E K +++D+ + +LV+S R A A + ++ G G VR + P
Sbjct: 418 DNLVGTEFEAKVLEIDEKKNRLVLSRRAVLEVERQAKLAEALKNINVGENYKGIVRKIMP 477
Query: 187 YGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEA 366
YGAFVDIGG+ GLLHIS IS +K +E VLS G E++ + + D + ++SLS K L
Sbjct: 478 YGAFVDIGGIEGLLHISDISWQKIKKVEDVLSVGQEIEVKLQSFDAESNKLSLSLKALSK 537
Query: 367 EPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASSVADDIVSSLDIASL 516
P D+ + V V R +A A +V DDI L I+ +
Sbjct: 538 SPWDVAEETLHVGDVINGKVVRLVA-----YGAFVAVNDDIQGLLHISQI 582
Score = 58.2 bits (139), Expect = 4e-07
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLET---GTVVSGTVRSVKPYGAFVDI 207
VG E+ +K D + KL +S + + + + ET G V++G V + YGAFV +
Sbjct: 510 VGQEIEVKLQSFDAESNKLSLSLKALSKSPWDVAEETLHVGDVINGKVVRLVAYGAFVAV 569
Query: 208 GG-VSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLS-TKVLEAE 369
+ GLLHISQI+ +E L+ G EV+ +++ +KD+ ++ L+ T+++E++
Sbjct: 570 NDDIQGLLHISQITKQRNAKVEDYLNRGQEVEVKIISLNKDEKKLGLALTELMESK 625
[140][TOP]
>UniRef100_Q039G5 SSU ribosomal protein S1P n=1 Tax=Lactobacillus casei ATCC 334
RepID=Q039G5_LACC3
Length = 439
Score = 99.8 bits (247), Expect = 1e-19
Identities = 54/138 (39%), Positives = 76/138 (55%), Gaps = 7/138 (5%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPYGAF 198
G EL K I+++ E +L++SHR AS+ ++ G V G V + +GAF
Sbjct: 160 GKELEFKIIEIEPSENRLILSHRAIVEASKAEARKEIFAKIQPGDTVEGKVARLTNFGAF 219
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
VD+GGV GL+H+S+IS DHV VL G E+K V+N D D+ RISLS K +P D
Sbjct: 220 VDLGGVDGLVHVSEISFDHVDKPSDVLKVGQEIKVKVLNVDPDRNRISLSIKATLPQPWD 279
Query: 379 MMTDPAAVFAVAEDTAAR 432
+ + A +V T R
Sbjct: 280 DIEEKAPAGSVLTGTVKR 297
Score = 79.3 bits (194), Expect = 2e-13
Identities = 46/117 (39%), Positives = 70/117 (59%), Gaps = 5/117 (4%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLE----TGTVVSGTVRSVKPYGAFVD 204
VG E+ +K + VD D ++ +S + A +E G+V++GTV+ + +GAFV+
Sbjct: 248 VGQEIKVKVLNVDPDRNRISLSIK-ATLPQPWDDIEEKAPAGSVLTGTVKRLTTFGAFVE 306
Query: 205 I-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEP 372
+ GV GL+HISQISH+HV VL G EV+ V++ D D R++LS K L+ P
Sbjct: 307 VFPGVEGLVHISQISHEHVATPADVLKEGQEVQVKVLSVDPDAHRLALSIKALQERP 363
[141][TOP]
>UniRef100_B3WE79 30S Ribosomal protein S1 n=3 Tax=Lactobacillus casei group
RepID=B3WE79_LACCB
Length = 439
Score = 99.8 bits (247), Expect = 1e-19
Identities = 54/138 (39%), Positives = 76/138 (55%), Gaps = 7/138 (5%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPYGAF 198
G EL K I+++ E +L++SHR AS+ ++ G V G V + +GAF
Sbjct: 160 GKELEFKIIEIEPSENRLILSHRAIVEASKAEARKEIFAKIQPGDTVEGKVARLTNFGAF 219
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
VD+GGV GL+H+S+IS DHV VL G E+K V+N D D+ RISLS K +P D
Sbjct: 220 VDLGGVDGLVHVSEISFDHVDKPSDVLKVGQEIKVKVLNVDPDRNRISLSIKATLPQPWD 279
Query: 379 MMTDPAAVFAVAEDTAAR 432
+ + A +V T R
Sbjct: 280 DIEEKAPAGSVLTGTVKR 297
Score = 79.3 bits (194), Expect = 2e-13
Identities = 46/117 (39%), Positives = 70/117 (59%), Gaps = 5/117 (4%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLE----TGTVVSGTVRSVKPYGAFVD 204
VG E+ +K + VD D ++ +S + A +E G+V++GTV+ + +GAFV+
Sbjct: 248 VGQEIKVKVLNVDPDRNRISLSIK-ATLPQPWDDIEEKAPAGSVLTGTVKRLTTFGAFVE 306
Query: 205 I-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEP 372
+ GV GL+HISQISH+HV VL G EV+ V++ D D R++LS K L+ P
Sbjct: 307 VFPGVEGLVHISQISHEHVATPADVLKEGQEVQVKVLSVDPDAHRLALSIKALQERP 363
[142][TOP]
>UniRef100_Q38WW2 30S Ribosomal protein S1 n=1 Tax=Lactobacillus sakei subsp. sakei
23K RepID=Q38WW2_LACSS
Length = 403
Score = 97.8 bits (242), Expect = 4e-19
Identities = 51/138 (36%), Positives = 78/138 (56%), Gaps = 7/138 (5%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLET-------GTVVSGTVRSVKPYGAF 198
G EL L+ I+++ E +L++S + R L+ G +V G V + +GAF
Sbjct: 162 GQELELQIIEIEPSENRLILSRKALVEQERQAQLKAVFEKLLPGDIVEGEVARLTNFGAF 221
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
VD+GGV GL+H+S+IS+DH+ VL G VK +++ D++KGRISLS K + P D
Sbjct: 222 VDLGGVDGLVHVSEISYDHINQPSDVLEVGQNVKVKILSLDQEKGRISLSIKDTQPGPWD 281
Query: 379 MMTDPAAVFAVAEDTAAR 432
+ + A V + E T R
Sbjct: 282 DIAEKAPVGSTLEGTVKR 299
Score = 71.2 bits (173), Expect = 4e-11
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 4/160 (2%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLE---TGTVVSGTVRSVKPYGAFVDI 207
VG + +K + +DQ++ ++ +S + E G+ + GTV+ + +GAFV++
Sbjct: 250 VGQNVKVKILSLDQEKGRISLSIKDTQPGPWDDIAEKAPVGSTLEGTVKRLTTFGAFVEV 309
Query: 208 -GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMM 384
GV GL+HISQISH H+ VL G V+ V++ D ++ R+ LS K L+ +P
Sbjct: 310 FPGVEGLVHISQISHQHIATPNDVLEEGQTVQVKVLSVDPEQQRLGLSIKALQEKPA--- 366
Query: 385 TDPAAVFAVAEDTAARYLARVEEERAAASSVADDIVSSLD 504
A + ED A EEE S+ D + +LD
Sbjct: 367 ---GAKDSEQEDVAPSDYEMPEEE--TGFSIGDMLGKALD 401
[143][TOP]
>UniRef100_A9AV75 RNA binding S1 domain protein n=1 Tax=Herpetosiphon aurantiacus
ATCC 23779 RepID=A9AV75_HERA2
Length = 415
Score = 97.8 bits (242), Expect = 4e-19
Identities = 54/126 (42%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
Frame = +1
Query: 34 LVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPYG 192
LVG LPLK I++++ +L++S R A R + LE G V +G V S+ +G
Sbjct: 189 LVGQTLPLKIIEINRSRNRLILSERQAVQEVRDSRKDQLLEKLEPGAVRTGRVTSLCDFG 248
Query: 193 AFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEP 372
AFVDIGG GL+H+S++S VK E VL G V Y+++ D+DK RI+LS K +AEP
Sbjct: 249 AFVDIGGADGLVHLSELSWSRVKHPEEVLKVGDAVSVYILSVDEDKKRIALSIKRTQAEP 308
Query: 373 GDMMTD 390
+TD
Sbjct: 309 WTTVTD 314
Score = 60.8 bits (146), Expect = 6e-08
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRMT---SLETGTVVSGTVRSVKPYGAFVDI 207
VG + + + VD+D+K++ +S + A T + G VSG V + +GAFV +
Sbjct: 279 VGDAVSVYILSVDEDKKRIALSIKRTQAEPWTTVTDRYQIGQSVSGVVTQLTAFGAFVRL 338
Query: 208 -GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMM 384
G+ GL+HIS++S + ++ V++ G V A ++ D + RI LST+ AE
Sbjct: 339 EDGIEGLIHISEMSDERIQHPRDVINEGDSVSARIIRIDPTRKRIGLSTRSGSAE----- 393
Query: 385 TDPAAVFAVAEDTAARYLARVEEE 456
A A AE A E+E
Sbjct: 394 ---ATAEATAETATEEPSAAAEDE 414
[144][TOP]
>UniRef100_A7NHV1 RNA binding S1 domain protein n=1 Tax=Roseiflexus castenholzii DSM
13941 RepID=A7NHV1_ROSCS
Length = 388
Score = 97.4 bits (241), Expect = 6e-19
Identities = 51/129 (39%), Positives = 77/129 (59%), Gaps = 7/129 (5%)
Frame = +1
Query: 13 RREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTV 171
R++A + +VG +PLK I+VD+D +LV+S R A R +T L+ G +++G V
Sbjct: 161 RQQALQRMVGQTIPLKVIEVDRDRNRLVLSERSATQEWRKAQKQRLLTELQPGDILTGRV 220
Query: 172 RSVKPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLST 351
+ +GAF+D+GG GL HIS++S V VLSPG EV+ V+ D ++ RI LS
Sbjct: 221 NQLTNFGAFIDLGGADGLAHISELSWQRVNHPREVLSPGQEVRVMVVEIDAERERIGLSL 280
Query: 352 KVLEAEPGD 378
+ L+ P D
Sbjct: 281 RRLQPNPWD 289
[145][TOP]
>UniRef100_A5V175 RNA binding S1 domain protein n=1 Tax=Roseiflexus sp. RS-1
RepID=A5V175_ROSS1
Length = 393
Score = 97.4 bits (241), Expect = 6e-19
Identities = 51/129 (39%), Positives = 77/129 (59%), Gaps = 7/129 (5%)
Frame = +1
Query: 13 RREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTV 171
R++A + +VG +PLK I+VD+D +LV+S R A R +T L+ G +++G V
Sbjct: 161 RQQALQRMVGQTIPLKVIEVDRDRNRLVLSERSATQEWRKAQKQRLLTELQPGDILTGRV 220
Query: 172 RSVKPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLST 351
+ +GAF+D+GG GL HIS++S V VLSPG EV+ V+ D ++ RI LS
Sbjct: 221 NQLTNFGAFIDLGGADGLAHISELSWQRVNHPREVLSPGQEVRVMVVEIDAERERIGLSL 280
Query: 352 KVLEAEPGD 378
+ L+ P D
Sbjct: 281 RRLQPNPWD 289
Score = 53.5 bits (127), Expect = 1e-05
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASRMT---SLETGTVVSGTVRSVKPYGAFVDIG 210
G E+ + +++D + +++ +S R T G +VSG V +V P+GAFV I
Sbjct: 259 GQEVRVMVVEIDAERERIGLSLRRLQPNPWDTIDQRYSLGQLVSGPVTNVAPFGAFVQIE 318
Query: 211 -GVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
V GL+H S++ D +L PG + A +++ DK + R+ LS + A+
Sbjct: 319 EAVEGLIHASELDADPQAQPRDLLQPGQIITARIISLDKQRQRMGLSLRHNGADESGATE 378
Query: 388 DPAAVFAVAE 417
P V E
Sbjct: 379 TPETPAPVEE 388
[146][TOP]
>UniRef100_P38494 30S ribosomal protein S1 homolog n=1 Tax=Bacillus subtilis
RepID=RS1H_BACSU
Length = 382
Score = 97.4 bits (241), Expect = 6e-19
Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 7/144 (4%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPY 189
D G L L +++D+D+ ++++SHR + + + SLE G+V+ G V+ + +
Sbjct: 142 DYKGKTLSLLVVELDRDKNRVILSHRAVVESEQANKKQELLQSLEVGSVLDGKVQRLTDF 201
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFVDIGG+ GL+HISQ+SH HV+ V+ G EVK V++ D+D RISLS K
Sbjct: 202 GAFVDIGGIDGLVHISQLSHSHVEKPSDVVEEGQEVKVKVLSVDRDNERISLSIKDTLPG 261
Query: 370 PGDMMTDPAAVFAVAEDTAARYLA 441
P + + + V E T R ++
Sbjct: 262 PWNQIGEKVKPGDVLEGTVQRLVS 285
Score = 70.9 bits (172), Expect = 6e-11
Identities = 46/124 (37%), Positives = 76/124 (61%), Gaps = 6/124 (4%)
Frame = +1
Query: 19 EAQEDLV--GMELPLKFIQVDQDEKKLVVSHR--LAAAASRM-TSLETGTVVSGTVRSVK 183
E D+V G E+ +K + VD+D +++ +S + L +++ ++ G V+ GTV+ +
Sbjct: 225 EKPSDVVEEGQEVKVKVLSVDRDNERISLSIKDTLPGPWNQIGEKVKPGDVLEGTVQRLV 284
Query: 184 PYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
+GAFV+I GV GL+HISQIS+ H+ VL G VK V++ ++++ RISLS + L
Sbjct: 285 SFGAFVEILPGVEGLVHISQISNKHIGTPHEVLEEGQTVKVKVLDVNENEERISLSMREL 344
Query: 361 EAEP 372
E P
Sbjct: 345 EETP 348
[147][TOP]
>UniRef100_P74142 30S ribosomal protein S1 homolog B n=1 Tax=Synechocystis sp. PCC
6803 RepID=RS1B_SYNY3
Length = 305
Score = 97.4 bits (241), Expect = 6e-19
Identities = 46/125 (36%), Positives = 73/125 (58%)
Frame = +1
Query: 10 VRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPY 189
+ ++ + LVG L ++ +QD KLV++ R A M + G + G V ++PY
Sbjct: 148 MHKDNMDALVGQVLKAHILEANQDNNKLVLTQRRIQQAESMGKIAAGNIYEGKVAKIQPY 207
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
G FV+I GV+GLLH+SQ+S V + + + G + YV D+ K RISLST++LE
Sbjct: 208 GVFVEIEGVTGLLHVSQVSGTRVDSLNTLFAFGQAISVYVQEIDEYKNRISLSTRILETY 267
Query: 370 PGDMM 384
PG+++
Sbjct: 268 PGELV 272
[148][TOP]
>UniRef100_B1MYB4 40S ribosomal protein S1 n=1 Tax=Leuconostoc citreum KM20
RepID=B1MYB4_LEUCK
Length = 396
Score = 96.7 bits (239), Expect = 1e-18
Identities = 53/136 (38%), Positives = 77/136 (56%), Gaps = 7/136 (5%)
Frame = +1
Query: 46 ELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPYGAFVD 204
++ + I++D +L++S + AA R + L G VV GTV + +GAFVD
Sbjct: 157 DIKAQVIEIDAANARLILSRKAVAAQERAAQLAEVFSKLSVGEVVEGTVARLTDFGAFVD 216
Query: 205 IGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMM 384
+GGV GL+H+S+ISHD VK+ VL+ G +V ++ D +KGRISLS K + P D
Sbjct: 217 LGGVDGLVHVSEISHDRVKNPADVLTKGDKVNVKILALDTEKGRISLSIKATQRGPWDEA 276
Query: 385 TDPAAVFAVAEDTAAR 432
D A +V E T R
Sbjct: 277 ADKIAAGSVLEGTVKR 292
Score = 67.0 bits (162), Expect = 8e-10
Identities = 41/128 (32%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTV 171
H V+ A G ++ +K + +D ++ ++ +S + + G+V+ GTV
Sbjct: 231 HDRVKNPADVLTKGDKVNVKILALDTEKGRISLSIKATQRGPWDEAADKIAAGSVLEGTV 290
Query: 172 RSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLS 348
+ VK +GAFV+I G+ GL+H+SQIS+ +++ VL G +V+ V++ + RISLS
Sbjct: 291 KRVKDFGAFVEILPGIEGLVHVSQISNKRIENPSEVLKSGDKVQVKVLDIKPAEERISLS 350
Query: 349 TKVLEAEP 372
K LE +P
Sbjct: 351 MKALEEKP 358
[149][TOP]
>UniRef100_C7XU35 Ribosomal protein S1 n=1 Tax=Lactobacillus coleohominis 101-4-CHN
RepID=C7XU35_9LACO
Length = 409
Score = 96.7 bits (239), Expect = 1e-18
Identities = 55/138 (39%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLA-------AAASRMTSLETGTVVSGTVRSVKPYGAF 198
G EL K I+++ E +L++SH+ AA + L G VV G V + +GAF
Sbjct: 158 GQELEFKIIEIEPSENRLILSHKEIVKKEHEEAAKKIFSELAAGDVVEGKVARMTNFGAF 217
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
+D+GGV GL+H+S+IS+DHV VL G +VK V+N D ++ RISLS K P D
Sbjct: 218 IDLGGVDGLVHVSEISYDHVDKPSDVLEVGQDVKVKVLNVDPERERISLSIKQTLPGPWD 277
Query: 379 MMTDPAAVFAVAEDTAAR 432
+ + AAV V T R
Sbjct: 278 DIEEKAAVDTVLTGTVKR 295
Score = 81.6 bits (200), Expect = 3e-14
Identities = 46/118 (38%), Positives = 70/118 (59%), Gaps = 4/118 (3%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETG---TVVSGTVRSVKPYGAFVDI 207
VG ++ +K + VD + +++ +S + E TV++GTV+ + +GAFV++
Sbjct: 246 VGQDVKVKVLNVDPERERISLSIKQTLPGPWDDIEEKAAVDTVLTGTVKRLTSFGAFVEV 305
Query: 208 -GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
GV GL+HISQISH H+ VL PG EVK V+N D ++ R+ LS K LE +P D
Sbjct: 306 FPGVEGLVHISQISHKHIATPADVLKPGQEVKVKVINVDPERQRLGLSIKALEEKPAD 363
[150][TOP]
>UniRef100_C1PEY3 RNA binding S1 domain protein n=1 Tax=Bacillus coagulans 36D1
RepID=C1PEY3_BACCO
Length = 378
Score = 96.7 bits (239), Expect = 1e-18
Identities = 52/144 (36%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPY 189
D G LP +++D+D+ +L++SHR + + LE G V+ GTV+ + +
Sbjct: 142 DYKGKTLPFLIVELDEDKNRLILSHRAVVEKEKEEKRQDILDHLEAGQVLEGTVQRLTSF 201
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFVDIGG+ GL+HISQ++H+ V+ V+ G +VK V++ D+D GRISLS K
Sbjct: 202 GAFVDIGGIDGLVHISQLAHERVETPSDVVQEGEQVKVKVLSVDRDNGRISLSIKDTLPG 261
Query: 370 PGDMMTDPAAVFAVAEDTAARYLA 441
P + + A V T R ++
Sbjct: 262 PWEGIEQKAPKGTVLTGTVKRLVS 285
Score = 70.9 bits (172), Expect = 6e-11
Identities = 46/123 (37%), Positives = 70/123 (56%), Gaps = 6/123 (4%)
Frame = +1
Query: 13 RREAQEDLV--GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRS 177
R E D+V G ++ +K + VD+D ++ +S + GTV++GTV+
Sbjct: 223 RVETPSDVVQEGEQVKVKVLSVDRDNGRISLSIKDTLPGPWEGIEQKAPKGTVLTGTVKR 282
Query: 178 VKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK 354
+ +GAFV++ GV GL+HISQISH HV VL G EV+ V++ ++ R+SLS K
Sbjct: 283 LVSFGAFVEVFPGVEGLVHISQISHKHVSTPHEVLREGQEVQVKVLDVNEQAHRLSLSMK 342
Query: 355 VLE 363
LE
Sbjct: 343 ELE 345
[151][TOP]
>UniRef100_B2GC34 30S ribosomal protein S1 n=3 Tax=Lactobacillus fermentum
RepID=B2GC34_LACF3
Length = 410
Score = 96.7 bits (239), Expect = 1e-18
Identities = 56/138 (40%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLA-------AAASRMTSLETGTVVSGTVRSVKPYGAF 198
G EL K I+++ E +L++SH+ AA + L G VV G V + +GAF
Sbjct: 158 GEELEFKIIEIEPSENRLILSHKEIVQAQHEEAAKKIFSELAAGDVVEGKVARMTNFGAF 217
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
+D+GGV GL+H+S+IS+DHV VL G EVK V+N D ++ RISLS K P D
Sbjct: 218 IDLGGVDGLVHVSEISYDHVDKPADVLEVGQEVKVKVLNVDPERERISLSIKQTLPGPWD 277
Query: 379 MMTDPAAVFAVAEDTAAR 432
+ + AAV V T R
Sbjct: 278 DIEEKAAVGTVLTGTVKR 295
Score = 79.7 bits (195), Expect = 1e-13
Identities = 46/116 (39%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLE---TGTVVSGTVRSVKPYGAFVDI 207
VG E+ +K + VD + +++ +S + E GTV++GTV+ + +GAFV++
Sbjct: 246 VGQEVKVKVLNVDPERERISLSIKQTLPGPWDDIEEKAAVGTVLTGTVKRLTSFGAFVEV 305
Query: 208 -GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEP 372
GV GL+HISQISH H+ VL G EVK V+N D ++ R+ LS K LE P
Sbjct: 306 FPGVEGLVHISQISHKHIATPADVLEAGQEVKVKVLNVDPERQRLGLSIKALEEAP 361
[152][TOP]
>UniRef100_Q6L5I7 Putative 30S ribosomal protein S1 n=1 Tax=Oryza sativa Japonica
Group RepID=Q6L5I7_ORYSJ
Length = 590
Score = 96.7 bits (239), Expect = 1e-18
Identities = 63/168 (37%), Positives = 98/168 (58%), Gaps = 3/168 (1%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
++ VG ++ + ++D+ +L++S + A A MT L GT++ GTVR + PYGA + I
Sbjct: 318 KNTVGQQIHVCITRIDEKANELIISEKEAWA---MTYLREGTLLQGTVRKLFPYGAQITI 374
Query: 208 GGVS--GLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDM 381
G + GLLH+S I+ + + VL G EVKA V+ GRI+LSTK LE+EPG
Sbjct: 375 GDTNRGGLLHVSNITRGQLTSVGDVLKVGEEVKAIVIKSTAP-GRIALSTKDLESEPGLF 433
Query: 382 MTDPAAVFAVAEDTAARYLARVEEERAAASSVADDIVSSLD-IASLDD 522
+++ VF+ AE+ A RY ++ E+ A ++ SS D +A DD
Sbjct: 434 LSNKEKVFSEAEEMAQRYRDQISEKHQPA-----ELDSSFDEVAPFDD 476
[153][TOP]
>UniRef100_B9FLB5 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9FLB5_ORYSJ
Length = 581
Score = 96.7 bits (239), Expect = 1e-18
Identities = 63/168 (37%), Positives = 98/168 (58%), Gaps = 3/168 (1%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
++ VG ++ + ++D+ +L++S + A A MT L GT++ GTVR + PYGA + I
Sbjct: 278 KNTVGQQIHVCITRIDEKANELIISEKEAWA---MTYLREGTLLQGTVRKLFPYGAQITI 334
Query: 208 GGVS--GLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDM 381
G + GLLH+S I+ + + VL G EVKA V+ GRI+LSTK LE+EPG
Sbjct: 335 GDTNRGGLLHVSNITRGQLTSVGDVLKVGEEVKAIVIKSTAP-GRIALSTKDLESEPGLF 393
Query: 382 MTDPAAVFAVAEDTAARYLARVEEERAAASSVADDIVSSLD-IASLDD 522
+++ VF+ AE+ A RY ++ E+ A ++ SS D +A DD
Sbjct: 394 LSNKEKVFSEAEEMAQRYRDQISEKHQPA-----ELDSSFDEVAPFDD 436
[154][TOP]
>UniRef100_A2Y6W7 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2Y6W7_ORYSI
Length = 536
Score = 96.7 bits (239), Expect = 1e-18
Identities = 63/168 (37%), Positives = 98/168 (58%), Gaps = 3/168 (1%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
++ VG ++ + ++D+ +L++S + A A MT L GT++ GTVR + PYGA + I
Sbjct: 349 KNTVGQQIHVCITRIDEKANELIISEKEAWA---MTYLREGTLLQGTVRKLFPYGAQITI 405
Query: 208 GGVS--GLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDM 381
G + GLLH+S I+ + + VL G EVKA V+ GRI+LSTK LE+EPG
Sbjct: 406 GDTNRGGLLHVSNITRGQLTSVGDVLKVGEEVKAIVIKSTAP-GRIALSTKDLESEPGLF 464
Query: 382 MTDPAAVFAVAEDTAARYLARVEEERAAASSVADDIVSSLD-IASLDD 522
+++ VF+ AE+ A RY ++ E+ A ++ SS D +A DD
Sbjct: 465 LSNKEKVFSEAEEMAQRYRDQISEKHQPA-----ELDSSFDEVAPFDD 507
[155][TOP]
>UniRef100_C8NF36 30S ribosomal protein S1 n=1 Tax=Granulicatella adiacens ATCC 49175
RepID=C8NF36_9LACT
Length = 397
Score = 95.9 bits (237), Expect = 2e-18
Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 7/138 (5%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASRMT-------SLETGTVVSGTVRSVKPYGAF 198
G L + ++++ E +L++S + AA + S++ G+VV+G V + +GAF
Sbjct: 153 GQTLAFEIVEIEPSENRLILSRKNLVAAEKAAKRAAVFESIQEGSVVTGKVARLTNFGAF 212
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
+D+GGV GL+HISQISH+HV L G EV+A V++ D + GR+SLS K A P D
Sbjct: 213 IDLGGVDGLVHISQISHEHVAKASDKLEVGQEVQAKVISVDPESGRVSLSIKDTLAGPWD 272
Query: 379 MMTDPAAVFAVAEDTAAR 432
+ + AAV +V + R
Sbjct: 273 NIEERAAVGSVLDGLVKR 290
Score = 70.5 bits (171), Expect = 8e-11
Identities = 45/128 (35%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLE---TGTVVSGTV 171
H V + + + VG E+ K I VD + ++ +S + A E G+V+ G V
Sbjct: 229 HEHVAKASDKLEVGQEVQAKVISVDPESGRVSLSIKDTLAGPWDNIEERAAVGSVLDGLV 288
Query: 172 RSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLS 348
+ + +GAFV++ GV GL+HISQI+H H+ VL G EV+ V+ ++ RISLS
Sbjct: 289 KRLTTFGAFVELFPGVEGLVHISQIAHQHIATPHEVLKEGQEVQVKVLEVHPEQQRISLS 348
Query: 349 TKVLEAEP 372
K L+ P
Sbjct: 349 IKALQEAP 356
[156][TOP]
>UniRef100_Q9LK47 Similarity to 30s ribosomal protein s1 n=1 Tax=Arabidopsis thaliana
RepID=Q9LK47_ARATH
Length = 392
Score = 95.9 bits (237), Expect = 2e-18
Identities = 50/124 (40%), Positives = 79/124 (63%), Gaps = 6/124 (4%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
E + LVG +LP+K +Q D++ +KL++S +LA ++ G V +G V SV+ YGAF
Sbjct: 153 EIAKTLVGSKLPVKVVQADEENRKLILSEKLALWPKYSQNVNVGDVFNGRVGSVEDYGAF 212
Query: 199 VDIG------GVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
+ + ++GL+H+S++S D+V+D+ VL G EV+ V N DK+K RI+LS K L
Sbjct: 213 IHLRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQL 272
Query: 361 EAEP 372
E +P
Sbjct: 273 EDDP 276
[157][TOP]
>UniRef100_UPI0001850F41 30S ribosomal protein S1 n=1 Tax=Bacillus coahuilensis m4-4
RepID=UPI0001850F41
Length = 299
Score = 95.5 bits (236), Expect = 2e-18
Identities = 52/144 (36%), Positives = 83/144 (57%), Gaps = 7/144 (4%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPY 189
D L K +++DQ++ +L++SHR + + + SL+ V+ GTV+ + +
Sbjct: 63 DYKNTSLTFKIVELDQEKNRLILSHRAVVESEKEQKKKQLLESLKQDQVLEGTVQRITDF 122
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFVDIGGV GL+HISQ+SH+HV+ V++ G VK V++ D+D RISLS K
Sbjct: 123 GAFVDIGGVDGLVHISQLSHEHVEKPTDVVAEGQAVKVKVLSVDRDNERISLSIKETLPG 182
Query: 370 PGDMMTDPAAVFAVAEDTAARYLA 441
P + + A+ +V E R ++
Sbjct: 183 PWSEIANRASKGSVLEGEVKRIVS 206
Score = 73.9 bits (180), Expect = 7e-12
Identities = 45/128 (35%), Positives = 73/128 (57%), Gaps = 4/128 (3%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHR--LAAAASRMTSLET-GTVVSGTV 171
H V + G + +K + VD+D +++ +S + L S + + + G+V+ G V
Sbjct: 142 HEHVEKPTDVVAEGQAVKVKVLSVDRDNERISLSIKETLPGPWSEIANRASKGSVLEGEV 201
Query: 172 RSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLS 348
+ + YGAF+++ GV GL+HISQ+SH HV VL G VK V++ ++D R+SLS
Sbjct: 202 KRIVSYGAFIELFPGVEGLVHISQLSHKHVGTPHEVLQEGQSVKVKVLDVNEDDQRLSLS 261
Query: 349 TKVLEAEP 372
K LE +P
Sbjct: 262 IKELEEKP 269
[158][TOP]
>UniRef100_Q5WGU6 30S ribosomal protein S1 n=1 Tax=Bacillus clausii KSM-K16
RepID=Q5WGU6_BACSK
Length = 384
Score = 95.1 bits (235), Expect = 3e-18
Identities = 55/144 (38%), Positives = 80/144 (55%), Gaps = 7/144 (4%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPY 189
D G L LK ++D+D KL++S R A + SL TG VV G V+ + +
Sbjct: 143 DYKGKPLRLKVTEIDKDNNKLILSQRAVLDAEIEEKKKQVLHSLSTGDVVEGKVQRLTSF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFVD+GGV GL+HISQI+H+ V+ VLS G EV+ V++ D D R+SLS K + A
Sbjct: 203 GAFVDVGGVDGLVHISQIAHERVEHPSDVLSEGQEVRVKVLSVDPDSERVSLSIKEMLAG 262
Query: 370 PGDMMTDPAAVFAVAEDTAARYLA 441
P + + + + T R ++
Sbjct: 263 PWENIESKFSAGDIVTGTVKRLVS 286
Score = 67.4 bits (163), Expect = 6e-10
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKK--LVVSHRLAAAASRMTS-LETGTVVSGTVRSVKPYGAFVDIG 210
G E+ +K + VD D ++ L + LA + S G +V+GTV+ + +GAFV+I
Sbjct: 235 GQEVRVKVLSVDPDSERVSLSIKEMLAGPWENIESKFSAGDIVTGTVKRLVSFGAFVEIA 294
Query: 211 -GVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GV GL+HISQIS H+ + VL G +V+A V+ + R+SLS + E
Sbjct: 295 PGVEGLVHISQISKRHIGTPQEVLEEGQQVQAKVLEVSEADRRVSLSIREASEE 348
[159][TOP]
>UniRef100_B9E6L6 30S ribosomal protein S1 n=1 Tax=Macrococcus caseolyticus JCSC5402
RepID=B9E6L6_MACCJ
Length = 387
Score = 95.1 bits (235), Expect = 3e-18
Identities = 49/139 (35%), Positives = 82/139 (58%), Gaps = 7/139 (5%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPYGA 195
VG L LK ++DQ++ +++++H++ A R+ +E G+V+ G V + +GA
Sbjct: 148 VGQVLTLKIEELDQEKNRVILNHKVIEAEENKVKKEQRLDEIEVGSVIEGEVLRITNFGA 207
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
FVDIG V GL+HISQI+HDH+ +E LS G +VK V++ DK+ R+SLS K P
Sbjct: 208 FVDIGEVDGLVHISQITHDHIDKVEDALSIGDKVKVKVLSVDKEAERVSLSMKAALPGPF 267
Query: 376 DMMTDPAAVFAVAEDTAAR 432
+ + + ++ + + R
Sbjct: 268 ETIEEKFSIGDIVDGEVVR 286
Score = 74.7 bits (182), Expect = 4e-12
Identities = 43/121 (35%), Positives = 72/121 (59%), Gaps = 4/121 (3%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLET---GTVVSGTVRSVKPYGAFVDI 207
+G ++ +K + VD++ +++ +S + A T E G +V G V + +GAFV+I
Sbjct: 237 IGDKVKVKVLSVDKEAERVSLSMKAALPGPFETIEEKFSIGDIVDGEVVRLANFGAFVEI 296
Query: 208 G-GVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMM 384
G+ GL+HISQISHDH+ + VL PG +VK +++ +K++ RI LS K + + D
Sbjct: 297 DKGLQGLVHISQISHDHIGNPSEVLEPGQKVKVKILDINKEEKRIGLSIKATQEQVEDFD 356
Query: 385 T 387
T
Sbjct: 357 T 357
[160][TOP]
>UniRef100_A9WF65 RNA binding S1 domain protein n=2 Tax=Chloroflexus
RepID=A9WF65_CHLAA
Length = 391
Score = 95.1 bits (235), Expect = 3e-18
Identities = 50/127 (39%), Positives = 75/127 (59%), Gaps = 7/127 (5%)
Frame = +1
Query: 13 RREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTV 171
R++A + +V E+PLK I+VD++ +LV+S R A R +T L+ G V+ G V
Sbjct: 162 RQQALQKMVNQEIPLKVIEVDRERNRLVLSERAATQEWRKAQKHRLLTELQPGDVLVGRV 221
Query: 172 RSVKPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLST 351
+ +GAF+D+GG GL HIS++S V VL PG EVK V+ D+++ RI LS
Sbjct: 222 NQLTNFGAFIDLGGADGLAHISELSWQRVNHPREVLQPGQEVKVVVVEIDRERERIGLSI 281
Query: 352 KVLEAEP 372
+ L+ P
Sbjct: 282 RQLQNNP 288
Score = 54.3 bits (129), Expect = 6e-06
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 7/126 (5%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASRMT---SLETGTVVSGTVRSVKPYGAFVDIG 210
G E+ + +++D++ +++ +S R T G +V+G V +V P+GAFV +
Sbjct: 260 GQEVKVVVVEIDRERERIGLSIRQLQNNPWETIDQRYTLGQLVTGPVTNVTPFGAFVQVE 319
Query: 211 -GVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL---EAEPGD 378
V GL+H S++ D +L PG V A V++ D+ + R+ LS + + E EP
Sbjct: 320 EAVEGLIHASELDADPQAQPRDILQPGQIVTARVISLDRQRQRMGLSLRRIGENENEPAP 379
Query: 379 MMTDPA 396
D A
Sbjct: 380 APADEA 385
[161][TOP]
>UniRef100_A8VXT0 Type IV pilus assembly PilZ n=1 Tax=Bacillus selenitireducens MLS10
RepID=A8VXT0_9BACI
Length = 339
Score = 95.1 bits (235), Expect = 3e-18
Identities = 53/119 (44%), Positives = 73/119 (61%), Gaps = 7/119 (5%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHR-------LAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
G L LK +++D++ KL++S R L + S+ G VVSGTV+ + +G F
Sbjct: 97 GKTLRLKVVELDRERNKLILSQRAVLDEEALNQKKETLHSISAGEVVSGTVQRITSFGVF 156
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
VDIGGV GL+HISQ+SH+H++ V+S G EVK V++ D D RISLS K E PG
Sbjct: 157 VDIGGVDGLVHISQLSHEHIETPSEVVSEGDEVKVKVLSVDPDNERISLSIK--ETMPG 213
Score = 66.6 bits (161), Expect = 1e-09
Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTV 171
HI E + G E+ +K + VD D +++ +S + G VV+G V
Sbjct: 175 HIETPSEVVSE--GDEVKVKVLSVDPDNERISLSIKETMPGPWEGVEEQFSVGDVVTGKV 232
Query: 172 RSVKPYGAFVDIG-GVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLS 348
+ + +GAFV++ GV GL+HISQI++ H+ VL G EV A +++ + D RISLS
Sbjct: 233 KRLVSFGAFVEVAKGVEGLVHISQIANRHIGTPGEVLKEGEEVSAKILDINLDDKRISLS 292
Query: 349 TKVLEAE 369
+ LE E
Sbjct: 293 IRALEEE 299
[162][TOP]
>UniRef100_P50889 40S ribosomal protein S1 n=1 Tax=Leuconostoc lactis RepID=RS1_LEULA
Length = 429
Score = 95.1 bits (235), Expect = 3e-18
Identities = 53/136 (38%), Positives = 77/136 (56%), Gaps = 7/136 (5%)
Frame = +1
Query: 46 ELPLKFIQVDQDEKKLVVSHRLAAA-------ASRMTSLETGTVVSGTVRSVKPYGAFVD 204
++ + I++D +L++S + AA A + L G VV GTV + +GAFVD
Sbjct: 190 DIKAQVIEIDPANARLILSRKAVAAQELAAQLAEVFSKLSVGEVVEGTVARLTDFGAFVD 249
Query: 205 IGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMM 384
+GGV GL+H+S+ISHD VK+ VL+ G +V ++ D +KGRISLS K + P D
Sbjct: 250 LGGVDGLVHVSEISHDRVKNPADVLTKGDKVDVKILALDTEKGRISLSIKATQRGPWDEA 309
Query: 385 TDPAAVFAVAEDTAAR 432
D A +V E T R
Sbjct: 310 ADQIAAGSVLEGTVKR 325
Score = 67.4 bits (163), Expect = 6e-10
Identities = 41/128 (32%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTV 171
H V+ A G ++ +K + +D ++ ++ +S + + G+V+ GTV
Sbjct: 264 HDRVKNPADVLTKGDKVDVKILALDTEKGRISLSIKATQRGPWDEAADQIAAGSVLEGTV 323
Query: 172 RSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLS 348
+ VK +GAFV+I G+ GL+H+SQIS+ +++ VL G +V+ V++ + RISLS
Sbjct: 324 KRVKDFGAFVEILPGIEGLVHVSQISNKRIENPSEVLKSGDKVQVKVLDIKPAEERISLS 383
Query: 349 TKVLEAEP 372
K LE +P
Sbjct: 384 MKALEEKP 391
[163][TOP]
>UniRef100_C6VQK4 30S ribosomal protein S1 n=3 Tax=Lactobacillus plantarum
RepID=C6VQK4_LACPJ
Length = 429
Score = 94.7 bits (234), Expect = 4e-18
Identities = 51/138 (36%), Positives = 78/138 (56%), Gaps = 7/138 (5%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPYGAF 198
G EL LK I+++ E +L++SHR R + +L+ G VV G V + +GAF
Sbjct: 161 GQELELKIIEIEPSENRLILSHRAVVEKQREAQREEALKTLQAGDVVEGKVARLTNFGAF 220
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
VD+GG+ GL+H+S+IS++ V+ VL G EV +++ D D+ R+SLS K EP D
Sbjct: 221 VDLGGIDGLVHVSEISYERVEKPADVLKVGQEVTVKILSVDADRERVSLSIKATLPEPWD 280
Query: 379 MMTDPAAVFAVAEDTAAR 432
+ + A AV + R
Sbjct: 281 GIEEKAPQGAVLDGKVKR 298
Score = 75.5 bits (184), Expect = 2e-12
Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Frame = +1
Query: 10 VRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLET----GTVVSGTVRS 177
V + A VG E+ +K + VD D +++ +S + A +E G V+ G V+
Sbjct: 240 VEKPADVLKVGQEVTVKILSVDADRERVSLSIK-ATLPEPWDGIEEKAPQGAVLDGKVKR 298
Query: 178 VKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK 354
+ +GAFV++ GV GL+HISQISH H+ VL G E+K V++ D+ R++LS K
Sbjct: 299 LTSFGAFVEVFPGVEGLVHISQISHQHIATPNDVLKVGQEIKVKVLDVRPDEKRLALSIK 358
Query: 355 VLEAEP 372
LE +P
Sbjct: 359 ALEEKP 364
[164][TOP]
>UniRef100_C2ESD6 30S ribosomal protein S1 n=1 Tax=Lactobacillus vaginalis ATCC 49540
RepID=C2ESD6_9LACO
Length = 410
Score = 94.7 bits (234), Expect = 4e-18
Identities = 54/138 (39%), Positives = 76/138 (55%), Gaps = 7/138 (5%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLA-------AAASRMTSLETGTVVSGTVRSVKPYGAF 198
G EL K I+++ E +L++SH+ AA L+ G VV G V + +GAF
Sbjct: 159 GQELEFKIIEIEPSENRLILSHKEIVQAQHEEAAKEIFAKLQPGDVVEGKVARMTNFGAF 218
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
+D+GGV GL+H+S+IS+DHV VL G EVK V+N D ++ RISLS K P D
Sbjct: 219 IDLGGVDGLVHVSEISYDHVDKPSDVLEAGQEVKVKVLNVDPERERISLSIKQTLPGPWD 278
Query: 379 MMTDPAAVFAVAEDTAAR 432
+ + A +V T R
Sbjct: 279 DIEEKAPEGSVLTGTVKR 296
Score = 80.1 bits (196), Expect = 1e-13
Identities = 46/117 (39%), Positives = 68/117 (58%), Gaps = 4/117 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLET---GTVVSGTVRSVKPYGAFVDI- 207
G E+ +K + VD + +++ +S + E G+V++GTV+ + +GAFV++
Sbjct: 248 GQEVKVKVLNVDPERERISLSIKQTLPGPWDDIEEKAPEGSVLTGTVKRLTSFGAFVEVF 307
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
GV GL+HISQISH H+ VL PG EVK V+N D + R+ LS K LE P D
Sbjct: 308 PGVEGLVHISQISHKHIATPADVLKPGQEVKVKVLNVDPEHQRLGLSMKALEERPKD 364
[165][TOP]
>UniRef100_B1HT94 30S ribosomal protein S1-like protein n=1 Tax=Lysinibacillus
sphaericus C3-41 RepID=B1HT94_LYSSC
Length = 378
Score = 94.4 bits (233), Expect = 5e-18
Identities = 48/142 (33%), Positives = 79/142 (55%), Gaps = 7/142 (4%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKP 186
E G L K +++D+++ +L++SHR + + + ++ G V+ G V+ +
Sbjct: 140 EGYKGKSLSFKIVELDKEKNRLILSHRAVVESEKASQKKDVINQIKAGDVLDGKVQRLAS 199
Query: 187 YGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEA 366
+GAF+D+GG+ GL+HISQ+SH+HV D+ VLS G V V++ D + RISLS K
Sbjct: 200 FGAFIDLGGIDGLVHISQVSHEHVSDVSEVLSEGQGVTVKVLSVDPENERISLSIKETIP 259
Query: 367 EPGDMMTDPAAVFAVAEDTAAR 432
P + + AA + E R
Sbjct: 260 GPWSNIEERAAKGTILEGKVKR 281
Score = 63.5 bits (153), Expect = 9e-09
Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLET---GTVVSGTVRSVKPYGAFVDI- 207
G + +K + VD + +++ +S + E GT++ G V+ + +GAFV++
Sbjct: 233 GQGVTVKVLSVDPENERISLSIKETIPGPWSNIEERAAKGTILEGKVKRLTSFGAFVEVF 292
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEP 372
GV GL+HISQI+H H+ L G +V+ V++ + + GR++LS K L P
Sbjct: 293 PGVEGLVHISQIAHKHINTPHEALKEGQDVQVKVLDVNAEDGRLALSIKELLENP 347
[166][TOP]
>UniRef100_Q67NT8 30S ribosomal protein S1 n=1 Tax=Symbiobacterium thermophilum
RepID=Q67NT8_SYMTH
Length = 441
Score = 94.0 bits (232), Expect = 6e-18
Identities = 47/139 (33%), Positives = 84/139 (60%), Gaps = 7/139 (5%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRM-------TSLETGTVVSGTVRSVKPYGA 195
VG ++ +K I++D + ++++S + A R ++++ G V+ GTV+S+ +GA
Sbjct: 187 VGQKIRVKIIELDPYKGRVILSRKQVLEAERTAARERFWSTVQEGDVLEGTVKSITDFGA 246
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
F+D+GGV GLLHIS++S+ +K V+S G +K V+ D++KG++SL K + +P
Sbjct: 247 FIDLGGVDGLLHISEMSYGRIKHPSQVVSEGERIKVKVLRLDREKGKVSLGLKQVLPDPW 306
Query: 376 DMMTDPAAVFAVAEDTAAR 432
D + + A+ E T AR
Sbjct: 307 DSVEEKYPEGAIVEGTVAR 325
Score = 59.3 bits (142), Expect = 2e-07
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Frame = +1
Query: 10 VRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSV 180
++ +Q G + +K +++D+++ K+ + + S G +V GTV +
Sbjct: 267 IKHPSQVVSEGERIKVKVLRLDREKGKVSLGLKQVLPDPWDSVEEKYPEGAIVEGTVARL 326
Query: 181 KPYGAFVDIG-GVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKV 357
+GAFV++ GV GL+HISQ++ + + V+S G VK V+N D RISLS +
Sbjct: 327 TTFGAFVELEPGVDGLIHISQMADRRINNPGEVVSIGDVVKVKVINVDAQNRRISLSLRA 386
Query: 358 LEAEPGDMMTDPAAVFAVAEDTAARYLARVEEERAAASSVAD 483
E A A+A D A Y V E A S A+
Sbjct: 387 AIEE--------LAAEAIAADVATPYRDVVPAEAGEAPSGAE 420
[167][TOP]
>UniRef100_C2D4K4 30S ribosomal protein S1 n=1 Tax=Lactobacillus brevis subsp.
gravesensis ATCC 27305 RepID=C2D4K4_LACBR
Length = 413
Score = 94.0 bits (232), Expect = 6e-18
Identities = 53/136 (38%), Positives = 78/136 (57%), Gaps = 7/136 (5%)
Frame = +1
Query: 46 ELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPYGAFVD 204
EL LK I++D +L++SH+ A + M +L G +V G V + +GAFVD
Sbjct: 159 ELELKIIEIDPVANRLILSHKAILQAQKAEEREKLMDTLHEGDIVEGKVARLTNFGAFVD 218
Query: 205 IGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMM 384
+GG+ GL+H+SQI+++ V+ VL G EVK V++ D D+ RISLS K EP D +
Sbjct: 219 LGGMDGLVHVSQIAYERVEKPSDVLKVGQEVKVKVLSVDFDRNRISLSIKQTLPEPWDGI 278
Query: 385 TDPAAVFAVAEDTAAR 432
+ A +V E T R
Sbjct: 279 EEKAPAGSVLEGTVKR 294
Score = 72.0 bits (175), Expect = 3e-11
Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 4/116 (3%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI 207
VG E+ +K + VD D ++ +S + G+V+ GTV+ + +GAFV++
Sbjct: 245 VGQEVKVKVLSVDFDRNRISLSIKQTLPEPWDGIEEKAPAGSVLEGTVKRLVDFGAFVEV 304
Query: 208 -GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEP 372
GV GL+HISQI+H+H+ VL G ++K V++ D D+ R++LS K L +P
Sbjct: 305 FPGVEGLVHISQIAHEHIATPGDVLKVGEKIKVKVLDVDPDRKRLALSIKALTDKP 360
[168][TOP]
>UniRef100_C0WTI9 30S ribosomal protein S1 n=2 Tax=Lactobacillus RepID=C0WTI9_LACBU
Length = 413
Score = 94.0 bits (232), Expect = 6e-18
Identities = 53/136 (38%), Positives = 78/136 (57%), Gaps = 7/136 (5%)
Frame = +1
Query: 46 ELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPYGAFVD 204
EL LK I++D +L++SH+ A + M +L G +V G V + +GAFVD
Sbjct: 159 ELELKIIEIDPVANRLILSHKAILQAQKAEEREKLMDTLHEGDIVEGKVARLTNFGAFVD 218
Query: 205 IGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMM 384
+GG+ GL+H+SQI+++ V+ VL G EVK V++ D D+ RISLS K EP D +
Sbjct: 219 LGGMDGLVHVSQIAYERVEKPSDVLKVGQEVKVKVLSVDFDRNRISLSIKQTLPEPWDGI 278
Query: 385 TDPAAVFAVAEDTAAR 432
+ A +V E T R
Sbjct: 279 EEKAPAGSVLEGTVKR 294
Score = 72.0 bits (175), Expect = 3e-11
Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 4/116 (3%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI 207
VG E+ +K + VD D ++ +S + G+V+ GTV+ + +GAFV++
Sbjct: 245 VGQEVKVKVLSVDFDRNRISLSIKQTLPEPWDGIEEKAPAGSVLEGTVKRLVDFGAFVEV 304
Query: 208 -GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEP 372
GV GL+HISQI+H+H+ VL G ++K V++ D D+ R++LS K L +P
Sbjct: 305 FPGVEGLVHISQIAHEHIATPGDVLKVGEKIKVKVLDVDPDRKRLALSIKALTDKP 360
[169][TOP]
>UniRef100_A5VJK3 SSU ribosomal protein S1P n=7 Tax=Lactobacillus reuteri
RepID=A5VJK3_LACRD
Length = 416
Score = 94.0 bits (232), Expect = 6e-18
Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 7/138 (5%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLA-------AAASRMTSLETGTVVSGTVRSVKPYGAF 198
G EL K ++++ E +L++SH+ AA L+ G VV G V + +GAF
Sbjct: 159 GQELEFKIVEIEPSENRLILSHKEIIQAQHEKAAEKVFAELQPGDVVEGKVARMTNFGAF 218
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
+D+GGV GL+H+S+IS+DHV VL+ G +VK V++ D ++ RISLS K P D
Sbjct: 219 IDLGGVDGLVHVSEISYDHVDKPSDVLTAGQDVKVKVLSVDPERERISLSIKQTLPGPWD 278
Query: 379 MMTDPAAVFAVAEDTAAR 432
+ + A V +V T R
Sbjct: 279 DIEEKAPVDSVLTGTVKR 296
Score = 73.2 bits (178), Expect = 1e-11
Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETG---TVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD + +++ +S + E +V++GTV+ + +GAFV++
Sbjct: 248 GQDVKVKVLSVDPERERISLSIKQTLPGPWDDIEEKAPVDSVLTGTVKRLTSFGAFVEVF 307
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEP 372
GV GL+HISQISH H+ VL PG EV+ V+N D + R+ LS K LE P
Sbjct: 308 PGVEGLVHISQISHKHIATPADVLKPGQEVQVKVINVDPEHQRLGLSMKALEERP 362
[170][TOP]
>UniRef100_B8G954 RNA binding S1 domain protein n=1 Tax=Chloroflexus aggregans DSM
9485 RepID=B8G954_CHLAD
Length = 400
Score = 93.6 bits (231), Expect = 8e-18
Identities = 57/155 (36%), Positives = 87/155 (56%), Gaps = 12/155 (7%)
Frame = +1
Query: 4 ISVRREAQED-----LVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMT-------SLET 147
+S EAQ+ LV +ELPLK I+++++ +L++S R A +R T SL+
Sbjct: 170 VSRASEAQKQSEMARLVNVELPLKVIEINRNRNRLILSERQALVETRETKKDELLASLQE 229
Query: 148 GTVVSGTVRSVKPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKD 327
G V G V SV +G FVDIGG GL+H+S+IS VK VL G +VK ++N D +
Sbjct: 230 GDVREGVVSSVCDFGVFVDIGGADGLVHLSEISWSRVKHPSEVLKVGDKVKVSILNIDHE 289
Query: 328 KGRISLSTKVLEAEPGDMMTDPAAVFAVAEDTAAR 432
+ RI+LS K ++EP + + + + E T +
Sbjct: 290 RKRIALSIKRTQSEPWTRVAERYQLGQIVEGTVTQ 324
Score = 57.8 bits (138), Expect = 5e-07
Identities = 35/118 (29%), Positives = 67/118 (56%), Gaps = 4/118 (3%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAA--SRMTS-LETGTVVSGTVRSVKPYGAFVDI 207
VG ++ + + +D + K++ +S + + +R+ + G +V GTV + +GAFV I
Sbjct: 275 VGDKVKVSILNIDHERKRIALSIKRTQSEPWTRVAERYQLGQIVEGTVTQLASFGAFVRI 334
Query: 208 -GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
GV GL+H+S++ + ++ VLS G V+A ++ D + R+ LS + L+ EP +
Sbjct: 335 EDGVEGLIHVSEMGDERIQHPRDVLSEGQVVQARIIRIDPARKRMGLSLR-LQQEPSE 391
[171][TOP]
>UniRef100_A9WHZ0 RNA binding S1 domain protein n=2 Tax=Chloroflexus
RepID=A9WHZ0_CHLAA
Length = 399
Score = 93.6 bits (231), Expect = 8e-18
Identities = 56/152 (36%), Positives = 86/152 (56%), Gaps = 12/152 (7%)
Frame = +1
Query: 34 LVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPYG 192
LV +ELPLK I+++++ +L++S R A +R +TSL G V G V SV +G
Sbjct: 184 LVNVELPLKVIEINRNRNRLILSERQALVETRESKKDELLTSLREGDVRDGVVSSVCDFG 243
Query: 193 AFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEP 372
FVDIGG GL+H+S+IS VK VL G +VK ++N D ++ RI+LS K ++EP
Sbjct: 244 VFVDIGGADGLVHLSEISWSRVKHPGEVLKVGDKVKVAILNIDHERKRIALSIKRTQSEP 303
Query: 373 GDMMTDPAAVFAVAEDTAARY-----LARVEE 453
+ + + + E T + AR+E+
Sbjct: 304 WTRVAERYQLGQIVEGTITQLASFGAFARIED 335
Score = 56.6 bits (135), Expect = 1e-06
Identities = 35/116 (30%), Positives = 65/116 (56%), Gaps = 4/116 (3%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAA--SRMTS-LETGTVVSGTVRSVKPYGAFVDI 207
VG ++ + + +D + K++ +S + + +R+ + G +V GT+ + +GAF I
Sbjct: 274 VGDKVKVAILNIDHERKRIALSIKRTQSEPWTRVAERYQLGQIVEGTITQLASFGAFARI 333
Query: 208 -GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEP 372
GV GL+HIS++ + ++ VLS G V+A ++ D + R+ LS + L AEP
Sbjct: 334 EDGVEGLIHISEMGDERIQHPREVLSEGQVVQARIIRIDPARKRMGLSLR-LHAEP 388
[172][TOP]
>UniRef100_A7GN35 RNA binding S1 domain protein n=1 Tax=Bacillus cytotoxicus NVH
391-98 RepID=A7GN35_BACCN
Length = 382
Score = 93.6 bits (231), Expect = 8e-18
Identities = 51/138 (36%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPYGAF 198
G L +K +++D+++ ++++SH+ ++SL+ G +V GTV+ + +GAF
Sbjct: 146 GKTLAVKIVELDREKNRVILSHKAVVEQELDSKKKEAISSLKEGEIVEGTVQRLTDFGAF 205
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
V++GGV GL+HISQISH+ V VL G +VK V++ D D RISLS K P +
Sbjct: 206 VNVGGVDGLVHISQISHERVGQPSDVLEQGQKVKVKVLSVDADTQRISLSIKAAAPGPWE 265
Query: 379 MMTDPAAVFAVAEDTAAR 432
+ D V V E T R
Sbjct: 266 HVADEIKVGDVREGTVNR 283
Score = 68.9 bits (167), Expect = 2e-10
Identities = 42/109 (38%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASR---MTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + AA ++ G V GTV + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAAPGPWEHVADEIKVGDVREGTVNRIVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK 354
GV GL+H+SQI++ HVK+ VL G EVK V+ + + RISLS K
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEIGQEVKVKVLEVNAAEKRISLSIK 343
[173][TOP]
>UniRef100_C5YUI5 Putative uncharacterized protein Sb09g026760 n=1 Tax=Sorghum
bicolor RepID=C5YUI5_SORBI
Length = 496
Score = 93.6 bits (231), Expect = 8e-18
Identities = 60/156 (38%), Positives = 91/156 (58%), Gaps = 4/156 (2%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDIGGV 216
VG E+ + ++DQ +L++S + A A + L GT++ GTVR + PYGA + IG
Sbjct: 314 VGQEMRVCITRIDQGNNELIISEKEAWAVAY---LREGTLLQGTVRKLFPYGAQIRIGET 370
Query: 217 S--GLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMTD 390
+ GLLHIS +++ ++ + VL G VKA V+ D RI+LSTK LE+EPG ++T+
Sbjct: 371 NRGGLLHISNMTNGELRSVADVLKVGDTVKALVIKSTPD--RIALSTKELESEPGLLLTN 428
Query: 391 PAAVFAVAEDTAARYLARVEE--ERAAASSVADDIV 492
VF+ AE+ A RY ++ + AA DD V
Sbjct: 429 KEKVFSEAEEMAQRYREQIAKPPRSIAAEDSCDDAV 464
[174][TOP]
>UniRef100_Q1WTQ3 SSU ribosomal protein S1P n=2 Tax=Lactobacillus salivarius
RepID=Q1WTQ3_LACS1
Length = 399
Score = 93.2 bits (230), Expect = 1e-17
Identities = 52/138 (37%), Positives = 76/138 (55%), Gaps = 7/138 (5%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPYGAF 198
G EL LK ++++ + +L++S + A R M L G VV G V + +GAF
Sbjct: 158 GQELELKIVEIEPSDNRLILSRKELVQAEREAKRQAVMEKLVAGDVVEGKVARLTNFGAF 217
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
+D+GGV GL+H+S+IS++ V L G EVK V++ D +KGRISLS K EP +
Sbjct: 218 IDLGGVDGLVHVSEISYERVNKPADALKVGQEVKVKVLSVDAEKGRISLSIKQTLPEPWE 277
Query: 379 MMTDPAAVFAVAEDTAAR 432
+ + A V E T R
Sbjct: 278 QVPEQVAEGDVLEGTVKR 295
Score = 69.7 bits (169), Expect = 1e-10
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Frame = +1
Query: 10 VRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSV 180
V + A VG E+ +K + VD ++ ++ +S + + G V+ GTV+ +
Sbjct: 237 VNKPADALKVGQEVKVKVLSVDAEKGRISLSIKQTLPEPWEQVPEQVAEGDVLEGTVKRL 296
Query: 181 KPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKV 357
+GAFV++ GV GL+HISQISH H+ VL+ G +V+ V++ D R++LS K
Sbjct: 297 TSFGAFVEVLPGVEGLVHISQISHKHIATPNEVLTSGEKVQVKVLSVDAADHRLALSIKA 356
Query: 358 LEAEP 372
L+ +P
Sbjct: 357 LQEKP 361
[175][TOP]
>UniRef100_B8G765 RNA binding S1 domain protein n=1 Tax=Chloroflexus aggregans DSM
9485 RepID=B8G765_CHLAD
Length = 397
Score = 93.2 bits (230), Expect = 1e-17
Identities = 49/127 (38%), Positives = 74/127 (58%), Gaps = 7/127 (5%)
Frame = +1
Query: 13 RREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTV 171
R+ A + ++ E+PLK I+VD++ +LV+S R A R +T L+ G V+ G V
Sbjct: 162 RQYALQKMINQEIPLKVIEVDRERNRLVLSERAATQEWRKAQKHRLLTELQPGDVLVGKV 221
Query: 172 RSVKPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLST 351
+ +GAF+D+GG GL HIS++S V VL PG EVK V+ D+++ RI LS
Sbjct: 222 NQLTNFGAFIDLGGADGLAHISELSWQRVNHPREVLQPGQEVKVVVVEIDRERERIGLSI 281
Query: 352 KVLEAEP 372
+ L+ P
Sbjct: 282 RQLQDNP 288
[176][TOP]
>UniRef100_C8P858 30S ribosomal protein S1 n=1 Tax=Lactobacillus antri DSM 16041
RepID=C8P858_9LACO
Length = 413
Score = 93.2 bits (230), Expect = 1e-17
Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 7/138 (5%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLA-------AAASRMTSLETGTVVSGTVRSVKPYGAF 198
G +L K I+++ E +L++SH+ AA L+ G VV G V + +GAF
Sbjct: 159 GQKLEFKIIEIEPSENRLILSHKEIVKAEHEQAAEKIFAELQAGDVVEGKVARMTNFGAF 218
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
VD+GGV GL+H+S+IS+DHV VLS G +VK V++ D D+ RISLS K P D
Sbjct: 219 VDLGGVDGLVHVSEISYDHVDKPSDVLSAGQDVKVKVLSVDPDRERISLSIKQTLPGPWD 278
Query: 379 MMTDPAAVFAVAEDTAAR 432
+ + A + T R
Sbjct: 279 DIEEKAPAGSTLTGTVKR 296
Score = 79.3 bits (194), Expect = 2e-13
Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 4/153 (2%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLE---TGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + E G+ ++GTV+ + +GAFV++
Sbjct: 248 GQDVKVKVLSVDPDRERISLSIKQTLPGPWDDIEEKAPAGSTLTGTVKRLTSFGAFVEVF 307
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GV GL+HISQISH H+ VL PG EV+ V+N D ++ R+ LS K LE P +
Sbjct: 308 PGVEGLVHISQISHKHIATPADVLKPGQEVQVKVLNVDPERQRLGLSMKALEERPKGEES 367
Query: 388 DPAAVFAVAEDTAARYLARVEEERAAASSVADD 486
D E+ R +R R+A S+ ++
Sbjct: 368 DN------GENYRGRRRSRRNNNRSAMSNAPEE 394
[177][TOP]
>UniRef100_C2KJ42 Ribosomal protein S1 n=1 Tax=Leuconostoc mesenteroides subsp.
cremoris ATCC 19254 RepID=C2KJ42_LEUMC
Length = 396
Score = 93.2 bits (230), Expect = 1e-17
Identities = 52/136 (38%), Positives = 75/136 (55%), Gaps = 7/136 (5%)
Frame = +1
Query: 46 ELPLKFIQVDQDEKKLVVSHRLAAAASRMTSL-------ETGTVVSGTVRSVKPYGAFVD 204
++ + I++D + +L++S + AA R L G VV G V + +GAFVD
Sbjct: 156 DIKAQVIEIDAAKARLILSRKAVAAQERAAQLAEAFEKLSVGEVVEGKVARLTDFGAFVD 215
Query: 205 IGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMM 384
+GGV GL+HIS+ISHD VK+ VL+ G V ++ D +KGRISLS K + P D +
Sbjct: 216 LGGVDGLVHISEISHDRVKNPADVLTKGETVNVKILALDAEKGRISLSIKATQPGPWDKV 275
Query: 385 TDPAAVFAVAEDTAAR 432
+ A V E T R
Sbjct: 276 AEEAPAGTVLEGTVKR 291
Score = 70.1 bits (170), Expect = 1e-10
Identities = 44/128 (34%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLE---TGTVVSGTV 171
H V+ A G + +K + +D ++ ++ +S + E GTV+ GTV
Sbjct: 230 HDRVKNPADVLTKGETVNVKILALDAEKGRISLSIKATQPGPWDKVAEEAPAGTVLEGTV 289
Query: 172 RSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLS 348
+ VK +GAFV+I G+ GL+H+SQISH +++ VL G +V+ V++ + RISLS
Sbjct: 290 KRVKDFGAFVEIFPGIEGLVHVSQISHKRIENPSEVLKSGDKVQVQVLDVKPAEERISLS 349
Query: 349 TKVLEAEP 372
K LE +P
Sbjct: 350 MKALEEKP 357
[178][TOP]
>UniRef100_Q03WN3 SSU ribosomal protein S1P n=1 Tax=Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293 RepID=Q03WN3_LEUMM
Length = 396
Score = 92.8 bits (229), Expect = 1e-17
Identities = 51/136 (37%), Positives = 75/136 (55%), Gaps = 7/136 (5%)
Frame = +1
Query: 46 ELPLKFIQVDQDEKKLVVSHRLAAAASRMTSL-------ETGTVVSGTVRSVKPYGAFVD 204
++ + I++D + +L++S + AA R L G VV G V + +GAFVD
Sbjct: 156 DIKAQVIEIDAAKARLILSRKAVAAQERAAQLAEAFEKLSVGEVVEGKVARLTDFGAFVD 215
Query: 205 IGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMM 384
+GGV GL+H+S+ISHD VK+ VL+ G V ++ D +KGRISLS K + P D +
Sbjct: 216 LGGVDGLVHVSEISHDRVKNPADVLTKGETVNVKILALDAEKGRISLSIKATQPGPWDKV 275
Query: 385 TDPAAVFAVAEDTAAR 432
+ A V E T R
Sbjct: 276 AEEAPAGTVLEGTVKR 291
Score = 70.1 bits (170), Expect = 1e-10
Identities = 44/128 (34%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLE---TGTVVSGTV 171
H V+ A G + +K + +D ++ ++ +S + E GTV+ GTV
Sbjct: 230 HDRVKNPADVLTKGETVNVKILALDAEKGRISLSIKATQPGPWDKVAEEAPAGTVLEGTV 289
Query: 172 RSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLS 348
+ VK +GAFV+I G+ GL+H+SQISH +++ VL G +V+ V++ + RISLS
Sbjct: 290 KRVKDFGAFVEIFPGIEGLVHVSQISHKRIENPSEVLKSGDKVQVQVLDVKPAEERISLS 349
Query: 349 TKVLEAEP 372
K LE +P
Sbjct: 350 MKALEEKP 357
[179][TOP]
>UniRef100_A7Z639 YpfD n=1 Tax=Bacillus amyloliquefaciens FZB42 RepID=A7Z639_BACA2
Length = 382
Score = 92.8 bits (229), Expect = 1e-17
Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPY 189
D G L L +++D+D+ ++++SHR + + +LE G+V+ G V+ + +
Sbjct: 142 DYKGKTLSLIVVELDRDKNRVILSHRAVVEKEQTAKKHDFLQTLEVGSVLEGKVQRLTDF 201
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFVDIGG+ GL+HISQ+SH HV+ V+ G +VK V++ D+D RISLS K E
Sbjct: 202 GAFVDIGGIDGLVHISQLSHSHVEKPSDVVEEGQDVKVKVLSVDRDNERISLSIK--ETL 259
Query: 370 PG 375
PG
Sbjct: 260 PG 261
Score = 68.2 bits (165), Expect = 4e-10
Identities = 45/124 (36%), Positives = 74/124 (59%), Gaps = 6/124 (4%)
Frame = +1
Query: 19 EAQEDLV--GMELPLKFIQVDQDEKKLVVSHR--LAAAASRM-TSLETGTVVSGTVRSVK 183
E D+V G ++ +K + VD+D +++ +S + L S++ ++ G V+ G V+ +
Sbjct: 225 EKPSDVVEEGQDVKVKVLSVDRDNERISLSIKETLPGPWSQVGEKVKQGDVLEGKVQRLV 284
Query: 184 PYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
+GAFV+I GV GL+HISQIS+ H+ VL G VK V++ ++ + RISLS + L
Sbjct: 285 SFGAFVEILPGVEGLVHISQISNKHIGTPHEVLEEGQTVKVKVLDVNESEERISLSMREL 344
Query: 361 EAEP 372
E P
Sbjct: 345 EEAP 348
[180][TOP]
>UniRef100_C2W617 30S ribosomal protein S1 n=1 Tax=Bacillus cereus Rock3-44
RepID=C2W617_BACCE
Length = 382
Score = 92.8 bits (229), Expect = 1e-17
Identities = 50/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVEQELESKKKDAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISHD V+ VL+ G VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHDRVEQPADVLTQGQSVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 65.9 bits (159), Expect = 2e-09
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTV 171
H V + A G + +K + VD D +++ +S + A + ++ G + G V
Sbjct: 222 HDRVEQPADVLTQGQSVKVKVLSVDADTQRISLSIKAAQPGPWENVAAEVKPGDIREGLV 281
Query: 172 RSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLS 348
+ + +GAFV+I GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS
Sbjct: 282 KRIVTFGAFVEILPGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHAAEKRISLS 341
Query: 349 TK 354
K
Sbjct: 342 IK 343
[181][TOP]
>UniRef100_A3IEJ0 Ribosomal protein S1, putative n=1 Tax=Bacillus sp. B14905
RepID=A3IEJ0_9BACI
Length = 378
Score = 92.8 bits (229), Expect = 1e-17
Identities = 48/142 (33%), Positives = 79/142 (55%), Gaps = 7/142 (4%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKP 186
E G L K +++D+++ +L++SHR + + + ++ G V+ G V+ +
Sbjct: 140 EGYKGKTLSFKIVELDKEKNRLILSHRAVVESEKASQKQNVINQIKAGDVLDGKVQRLAS 199
Query: 187 YGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEA 366
+GAF+D+GG+ GL+HISQ+SH+HV D+ VLS G V V++ D RISLS K
Sbjct: 200 FGAFIDLGGIDGLVHISQVSHEHVSDVSEVLSEGQGVTVKVLSVDPANERISLSIKETIP 259
Query: 367 EPGDMMTDPAAVFAVAEDTAAR 432
P + + AA A+ + R
Sbjct: 260 GPWSNIEERAAKGAILDGKVKR 281
Score = 61.2 bits (147), Expect = 5e-08
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = +1
Query: 148 GTVVSGTVRSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDK 324
G ++ G V+ + +GAFV++ GV GL+HISQI+H H+ L G EV+ V++ +
Sbjct: 272 GAILDGKVKRLTSFGAFVEVFPGVEGLVHISQIAHKHINTPHEALKEGQEVQVKVLDVNA 331
Query: 325 DKGRISLSTKVLEAEP 372
+ GR++LS K L P
Sbjct: 332 EDGRLALSIKELLENP 347
[182][TOP]
>UniRef100_C3HY35 30S ribosomal protein S1 n=1 Tax=Bacillus thuringiensis IBL 200
RepID=C3HY35_BACTU
Length = 382
Score = 92.4 bits (228), Expect = 2e-17
Identities = 50/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K I++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIIELDREKNRVILSHKAVVELELDSQKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVAGEIKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK 354
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHAAEKRISLSIK 343
[183][TOP]
>UniRef100_UPI0001B41599 30S ribosomal protein S1 n=1 Tax=Bacillus anthracis str. A1055
RepID=UPI0001B41599
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 64.3 bits (155), Expect = 5e-09
Identities = 46/144 (31%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASRMT---SLETGTVVSGTVRSVKPYGAFVDIG 210
G ++ +K + VD D +++ +S + A ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVGGEVKAGDIREGVVKRLVTFGAFVEIL 294
Query: 211 -GVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K EA + +T
Sbjct: 295 LGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK--EALEENNVT 352
Query: 388 DPAAVFAVAEDTAARYLARVEEER 459
+ + + D+A L+ + E+
Sbjct: 353 EDYSQYEPNADSATFQLSDIIGEQ 376
[184][TOP]
>UniRef100_Q65I09 Nucleic acid-binding protein n=1 Tax=Bacillus licheniformis ATCC
14580 RepID=Q65I09_BACLD
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 74/122 (60%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPY 189
D G L L +++D+D+ ++++SHR + + +LE G V+ G V+ + +
Sbjct: 142 DYKGKTLTLIVVELDRDKNRVILSHRAVVEKEQSERKQEFLQTLEAGQVLEGKVQRLTDF 201
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFVDIGG+ GL+HISQ+SH HV+ V+ G +VK V++ D+D RISLS K E
Sbjct: 202 GAFVDIGGIDGLVHISQLSHSHVEKPSDVVEEGQDVKVKVLSVDRDNERISLSIK--ETL 259
Query: 370 PG 375
PG
Sbjct: 260 PG 261
Score = 68.6 bits (166), Expect = 3e-10
Identities = 44/121 (36%), Positives = 74/121 (61%), Gaps = 6/121 (4%)
Frame = +1
Query: 19 EAQEDLV--GMELPLKFIQVDQDEKKLVVSHR--LAAAASRM-TSLETGTVVSGTVRSVK 183
E D+V G ++ +K + VD+D +++ +S + L S + ++ G V+ G V+ +
Sbjct: 225 EKPSDVVEEGQDVKVKVLSVDRDNERISLSIKETLPGPWSNIGEKVKPGDVLDGKVQRLV 284
Query: 184 PYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
+GAFV++ GV GL+HISQIS+ H+ VL G +VK V++ ++++ RISLS K L
Sbjct: 285 SFGAFVEVLPGVEGLVHISQISNKHIGTPHEVLEEGQDVKVKVLDVNEEEERISLSMKEL 344
Query: 361 E 363
E
Sbjct: 345 E 345
[185][TOP]
>UniRef100_Q63DN4 Ribosomal protein S1 (30S ribosomal protein S1) n=1 Tax=Bacillus
cereus E33L RepID=Q63DN4_BACCZ
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 65.5 bits (158), Expect = 2e-09
Identities = 46/144 (31%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASRMT---SLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENIGGEIKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K EA + +T
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK--EALEENNVT 352
Query: 388 DPAAVFAVAEDTAARYLARVEEER 459
+ + + D+A L+ + E+
Sbjct: 353 EDYSQYEPNADSATFQLSDIIGEQ 376
[186][TOP]
>UniRef100_B9IVM1 Ribosomal protein S1 (30S ribosomal protein S1) n=1 Tax=Bacillus
cereus Q1 RepID=B9IVM1_BACCQ
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 65.1 bits (157), Expect = 3e-09
Identities = 46/144 (31%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASRMT---SLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVGGEVKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K EA + +T
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK--EALEENNVT 352
Query: 388 DPAAVFAVAEDTAARYLARVEEER 459
+ + + D+A L+ + E+
Sbjct: 353 EDYSQYEPNADSATFQLSDIIGEQ 376
[187][TOP]
>UniRef100_Q4MSR0 Ribosomal protein S1 n=1 Tax=Bacillus cereus G9241
RepID=Q4MSR0_BACCE
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 64.3 bits (155), Expect = 5e-09
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVAGEIKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK 354
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK 343
[188][TOP]
>UniRef100_Q3ENL3 SSU ribosomal protein S1P n=1 Tax=Bacillus thuringiensis serovar
israelensis ATCC 35646 RepID=Q3ENL3_BACTI
Length = 313
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 74 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 133
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 134 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 191
Query: 370 PG 375
PG
Sbjct: 192 PG 193
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 166 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVAGEIKAGDIREGVVKRLVTFGAFVEIL 225
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK 354
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K
Sbjct: 226 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHAAEKRISLSIK 274
[189][TOP]
>UniRef100_B7IP76 Ribosomal protein S1 n=2 Tax=Bacillus cereus group
RepID=B7IP76_BACC2
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVAGEIKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK 354
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHAAEKRISLSIK 343
[190][TOP]
>UniRef100_C3EIH7 30S ribosomal protein S1 n=1 Tax=Bacillus thuringiensis serovar
kurstaki str. T03a001 RepID=C3EIH7_BACTK
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 66.2 bits (160), Expect = 1e-09
Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 4/144 (2%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVAGEIKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K EA + +T
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVQVAEKRISLSIK--EALEENNVT 352
Query: 388 DPAAVFAVAEDTAARYLARVEEER 459
+ + + D+A L+ + E+
Sbjct: 353 EDYSQYEPNADSATFQLSDIIGEQ 376
[191][TOP]
>UniRef100_C3DHJ2 30S ribosomal protein S1 n=1 Tax=Bacillus thuringiensis serovar
sotto str. T04001 RepID=C3DHJ2_BACTS
Length = 393
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVAGEIKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK 354
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHAAEKRISLSIK 343
[192][TOP]
>UniRef100_C3CGG6 30S ribosomal protein S1 n=3 Tax=Bacillus thuringiensis
RepID=C3CGG6_BACTU
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 64.3 bits (155), Expect = 5e-09
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVAGEIKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK 354
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK 343
[193][TOP]
>UniRef100_C3C003 30S ribosomal protein S1 n=1 Tax=Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1 RepID=C3C003_BACTU
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 64.3 bits (155), Expect = 5e-09
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVAGEIKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK 354
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK 343
[194][TOP]
>UniRef100_C2Z5K2 30S ribosomal protein S1 n=2 Tax=Bacillus cereus RepID=C2Z5K2_BACCE
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 64.3 bits (155), Expect = 5e-09
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVAGEIKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK 354
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK 343
[195][TOP]
>UniRef100_C2YPB9 30S ribosomal protein S1 n=1 Tax=Bacillus cereus AH1271
RepID=C2YPB9_BACCE
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + L+ G + G V+ + +GAFV++
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVAGELKAGDIREGVVKRLVTFGAFVEVL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK 354
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K
Sbjct: 295 PGVEGLVHVSQIANRHVKNPSEVLEMGQEVKVKVLEVHVAEKRISLSIK 343
[196][TOP]
>UniRef100_C2XRN3 30S ribosomal protein S1 n=1 Tax=Bacillus cereus AH603
RepID=C2XRN3_BACCE
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 64.3 bits (155), Expect = 5e-09
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVAGEIKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK 354
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK 343
[197][TOP]
>UniRef100_Q81FS1 SSU ribosomal protein S1P n=2 Tax=Bacillus cereus
RepID=Q81FS1_BACCR
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 65.9 bits (159), Expect = 2e-09
Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 4/144 (2%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVAGEIKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K EA + +T
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK--EALEENNVT 352
Query: 388 DPAAVFAVAEDTAARYLARVEEER 459
+ + + D+A L+ + E+
Sbjct: 353 EDYSQYEPNADSATFQLSDIIGEQ 376
[198][TOP]
>UniRef100_B7HL08 Ribosomal protein S1 n=2 Tax=Bacillus cereus RepID=B7HL08_BACC7
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 65.1 bits (157), Expect = 3e-09
Identities = 46/144 (31%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASRMT---SLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVGGEVKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K EA + +T
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK--EALEENNVT 352
Query: 388 DPAAVFAVAEDTAARYLARVEEER 459
+ + + D+A L+ + E+
Sbjct: 353 EDYSQYEPNADSATFQLSDIIGEQ 376
[199][TOP]
>UniRef100_C2QQP1 30S ribosomal protein S1 n=1 Tax=Bacillus cereus ATCC 4342
RepID=C2QQP1_BACCE
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 65.5 bits (158), Expect = 2e-09
Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 4/144 (2%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVAGEIKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K EA + +T
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEIGQEVKVKVLEVHVAEKRISLSIK--EALEENNVT 352
Query: 388 DPAAVFAVAEDTAARYLARVEEER 459
+ + + D+A L+ + E+
Sbjct: 353 EDYSQYEPNADSATFQLSDIIGEQ 376
[200][TOP]
>UniRef100_C2Q9N4 30S ribosomal protein S1 n=1 Tax=Bacillus cereus R309803
RepID=C2Q9N4_BACCE
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 63.5 bits (153), Expect = 9e-09
Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVAGEIKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GV GL+H+SQI++ HVK+ VL G EV V+ + RISLS K EA + +T
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVTVKVLEVHVAEKRISLSIK--EALDENNVT 352
Query: 388 DPAAVFAVAEDTAARYLARVEEER 459
+ + + D+A L+ + E+
Sbjct: 353 EDYSQYEPNADSATFQLSDIIGEQ 376
[201][TOP]
>UniRef100_C2PCL6 30S ribosomal protein S1 n=1 Tax=Bacillus cereus MM3
RepID=C2PCL6_BACCE
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 64.3 bits (155), Expect = 5e-09
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVAGEIKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK 354
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK 343
[202][TOP]
>UniRef100_B7HHQ1 Ribosomal protein S1 n=10 Tax=Bacillus cereus group
RepID=B7HHQ1_BACC4
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 65.9 bits (159), Expect = 2e-09
Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 4/144 (2%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVAGEIKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K EA + +T
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK--EALEENNVT 352
Query: 388 DPAAVFAVAEDTAARYLARVEEER 459
+ + + D+A L+ + E+
Sbjct: 353 EDYSQYEPNADSATFQLSDIIGEQ 376
[203][TOP]
>UniRef100_C2MYJ0 30S ribosomal protein S1 n=1 Tax=Bacillus cereus ATCC 10876
RepID=C2MYJ0_BACCE
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 65.5 bits (158), Expect = 2e-09
Identities = 45/144 (31%), Positives = 79/144 (54%), Gaps = 4/144 (2%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV++
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVAGEIKAGDIREGVVKRLVTFGAFVEVL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K EA + +T
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK--EALEENNVT 352
Query: 388 DPAAVFAVAEDTAARYLARVEEER 459
+ + + D+A L+ + E+
Sbjct: 353 EDYSQYEPNADSATFQLSDIIGEQ 376
[204][TOP]
>UniRef100_B5V2S0 Ribosomal protein S1 n=2 Tax=Bacillus cereus RepID=B5V2S0_BACCE
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 65.1 bits (157), Expect = 3e-09
Identities = 46/144 (31%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASRMT---SLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVGGEVKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K EA + +T
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK--EALEENNVT 352
Query: 388 DPAAVFAVAEDTAARYLARVEEER 459
+ + + D+A L+ + E+
Sbjct: 353 EDYSQYEPNADSATFQLSDIIGEQ 376
[205][TOP]
>UniRef100_B5URX2 Ribosomal protein S1 n=1 Tax=Bacillus cereus AH1134
RepID=B5URX2_BACCE
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 65.9 bits (159), Expect = 2e-09
Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 4/144 (2%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVAGEIKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K EA + +T
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK--EALEENNVT 352
Query: 388 DPAAVFAVAEDTAARYLARVEEER 459
+ + + D+A L+ + E+
Sbjct: 353 EDYSQYEPNADSATFQLSDIIGEQ 376
[206][TOP]
>UniRef100_A0RBV3 SSU ribosomal protein S1P n=23 Tax=Bacillus cereus group
RepID=A0RBV3_BACAH
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 65.1 bits (157), Expect = 3e-09
Identities = 46/144 (31%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASRMT---SLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVGGEVKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K EA + +T
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK--EALEENNVT 352
Query: 388 DPAAVFAVAEDTAARYLARVEEER 459
+ + + D+A L+ + E+
Sbjct: 353 EDYSQYEPNADSATFQLSDIIGEQ 376
[207][TOP]
>UniRef100_O06000 30S ribosomal protein S1 homolog n=1 Tax=Bacillus cereus ATCC 10987
RepID=RS1H_BACC1
Length = 382
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 65.1 bits (157), Expect = 3e-09
Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 4/144 (2%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENIAGEVKAGDIREGIVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K EA + +T
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK--EAFEENNVT 352
Query: 388 DPAAVFAVAEDTAARYLARVEEER 459
+ + + D+A L+ + E+
Sbjct: 353 EDYSQYEPNADSATFQLSDIIGEQ 376
[208][TOP]
>UniRef100_Q03SA2 SSU ribosomal protein S1P n=1 Tax=Lactobacillus brevis ATCC 367
RepID=Q03SA2_LACBA
Length = 434
Score = 91.7 bits (226), Expect = 3e-17
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Frame = +1
Query: 28 EDLV---GMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRS 177
EDL G L K ++++ E +L++SHR R M L G VV G V
Sbjct: 156 EDLAQFKGQTLEFKIVEIEPSENRLILSHRAIVEKQRAAQKEEIMAKLTAGDVVDGKVAR 215
Query: 178 VKPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKV 357
+ +GAFVD+GGV GL+H+S+I+ + V+ VL G +VK V++ D D+ RISLS K
Sbjct: 216 LTNFGAFVDLGGVDGLVHVSEIAFERVEKPSDVLKVGQDVKVKVLSVDADRDRISLSIKQ 275
Query: 358 LEAEPGDMMTDPAAVFAVAEDTAAR 432
EP D + D A + + T R
Sbjct: 276 TLPEPWDGIEDKAPQGSTLDGTVKR 300
Score = 69.7 bits (169), Expect = 1e-10
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI 207
VG ++ +K + VD D ++ +S + G+ + GTV+ + +GAFV++
Sbjct: 251 VGQDVKVKVLSVDADRDRISLSIKQTLPEPWDGIEDKAPQGSTLDGTVKRLTSFGAFVEV 310
Query: 208 -GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEP 372
GV GL+HISQISH H+ VL G E+K V++ + R++LS K LE +P
Sbjct: 311 FPGVEGLVHISQISHQHIATPADVLKVGQEIKVKVLDVRPEDHRLALSIKALEEKP 366
[209][TOP]
>UniRef100_D0BJA7 30S ribosomal protein S1 n=1 Tax=Granulicatella elegans ATCC 700633
RepID=D0BJA7_9LACT
Length = 407
Score = 91.7 bits (226), Expect = 3e-17
Identities = 46/119 (38%), Positives = 73/119 (61%)
Frame = +1
Query: 85 KKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDIGGVSGLLHISQISHDHVKD 264
K++V + + A AS + ++ G +V+G V + +GAF+D+GG+ GL+H+S+ISH+HV
Sbjct: 185 KEIVANEKAAKRASALEAVYEGAIVTGKVARLTNFGAFIDLGGIDGLVHVSEISHEHVSK 244
Query: 265 IEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMTDPAAVFAVAEDTAARYLA 441
L+ G V+A V+ D +KGR+SLS K P D +T+ AAV + T R+ A
Sbjct: 245 PSDFLAVGQTVEAKVIGLDAEKGRVSLSIKETVPGPWDNITERAAVDSTLVGTVKRFAA 303
Score = 64.7 bits (156), Expect = 4e-09
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVS---GTV 171
H V + + VG + K I +D ++ ++ +S + E V S GTV
Sbjct: 239 HEHVSKPSDFLAVGQTVEAKVIGLDAEKGRVSLSIKETVPGPWDNITERAAVDSTLVGTV 298
Query: 172 RSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLS 348
+ +GAFV++ GV GL+HISQI+H H+ + VL G EV V+ ++ + RISLS
Sbjct: 299 KRFAAFGAFVELFPGVEGLVHISQIAHKHIATPQEVLQVGQEVSVKVLEVNEAEKRISLS 358
Query: 349 TKVLEAEP 372
K LE P
Sbjct: 359 IKALEEAP 366
[210][TOP]
>UniRef100_C3A3P1 30S ribosomal protein S1 n=1 Tax=Bacillus mycoides DSM 2048
RepID=C3A3P1_BACMY
Length = 382
Score = 91.7 bits (226), Expect = 3e-17
Identities = 48/122 (39%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G +V GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDIVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 64.3 bits (155), Expect = 5e-09
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVAGEIKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK 354
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK 343
[211][TOP]
>UniRef100_C2TUZ6 30S ribosomal protein S1 n=3 Tax=Bacillus cereus RepID=C2TUZ6_BACCE
Length = 382
Score = 91.7 bits (226), Expect = 3e-17
Identities = 48/122 (39%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G +V GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDIVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 65.9 bits (159), Expect = 2e-09
Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 4/144 (2%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVAGEIKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K EA + +T
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK--EALEENNVT 352
Query: 388 DPAAVFAVAEDTAARYLARVEEER 459
+ + + D+A L+ + E+
Sbjct: 353 EDYSKYEPNADSATFQLSDIIGEQ 376
[212][TOP]
>UniRef100_A9VMA6 RNA binding S1 domain protein n=2 Tax=Bacillus cereus group
RepID=A9VMA6_BACWK
Length = 382
Score = 91.7 bits (226), Expect = 3e-17
Identities = 48/122 (39%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G +V GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDIVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 64.3 bits (155), Expect = 5e-09
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVAGEIKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK 354
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK 343
[213][TOP]
>UniRef100_B3Z7M0 Ribosomal protein S1 n=1 Tax=Bacillus cereus NVH0597-99
RepID=B3Z7M0_BACCE
Length = 382
Score = 91.7 bits (226), Expect = 3e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGETLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 65.1 bits (157), Expect = 3e-09
Identities = 46/144 (31%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASRMT---SLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVKVKVLSVDADTQRISLSIKAAQPGPWENVGGEVKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K EA + +T
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK--EALEENNVT 352
Query: 388 DPAAVFAVAEDTAARYLARVEEER 459
+ + + D+A L+ + E+
Sbjct: 353 EDYSQYEPNADSATFQLSDIIGEQ 376
[214][TOP]
>UniRef100_UPI0001695C78 30S ribosomal protein S1 n=1 Tax=Listeria monocytogenes FSL J2-003
RepID=UPI0001695C78
Length = 381
Score = 91.3 bits (225), Expect = 4e-17
Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 7/141 (4%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPY 189
D G L K ++ + + ++++SHR + ++ ++ G V+ GTV+ + +
Sbjct: 142 DYKGTTLTFKVVEFEPENNRVILSHRAVVETEKASQKQALLSEIKEGDVIEGTVQRLANF 201
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFVDIGGV GL+HISQIS+ H+ + VL G +V V+ D + RISLS K
Sbjct: 202 GAFVDIGGVDGLVHISQISYKHIATPQEVLEEGQKVTVKVIGIDPENERISLSIKATLPG 261
Query: 370 PGDMMTDPAAVFAVAEDTAAR 432
P D +T+ A V +V E R
Sbjct: 262 PWDGITEKAQVGSVLEGKVVR 282
Score = 68.6 bits (166), Expect = 3e-10
Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTV 171
HI+ +E E+ G ++ +K I +D + +++ +S + + G+V+ G V
Sbjct: 223 HIATPQEVLEE--GQKVTVKVIGIDPENERISLSIKATLPGPWDGITEKAQVGSVLEGKV 280
Query: 172 RSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLS 348
+ +GAFV+I GV GL+HISQISH+H+ + VLS G V+ V+ ++ R+SLS
Sbjct: 281 VRLVTFGAFVEIFPGVEGLVHISQISHEHIGTPQEVLSEGQTVEVKVLEVNEADKRLSLS 340
Query: 349 TKVLEAEP 372
K L+ P
Sbjct: 341 IKELQDAP 348
[215][TOP]
>UniRef100_Q8EQA5 30S ribosomal protein S1 n=1 Tax=Oceanobacillus iheyensis
RepID=Q8EQA5_OCEIH
Length = 376
Score = 91.3 bits (225), Expect = 4e-17
Identities = 50/144 (34%), Positives = 80/144 (55%), Gaps = 7/144 (4%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPY 189
D + L +K +D+ + ++++SHR + SLE G V+ GTV+ + +
Sbjct: 139 DYLNKTLKVKIADLDRSQNRVILSHRAIVEDEEKNRKNDVLQSLEPGQVIEGTVQRITNF 198
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFVD+GGV GL+HISQ++H+HV+ V+S G ++K V++ D D RISLS K
Sbjct: 199 GAFVDLGGVDGLVHISQLAHEHVEKTSDVVSEGDKIKVEVLSVDLDNERISLSHKNTLPG 258
Query: 370 PGDMMTDPAAVFAVAEDTAARYLA 441
P + + V + E T R ++
Sbjct: 259 PWANVEEQVKVGSTIEGTVKRLVS 282
Score = 67.8 bits (164), Expect = 5e-10
Identities = 42/123 (34%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Frame = +1
Query: 19 EAQEDLV--GMELPLKFIQVDQDEKKLVVSHRLAAA---ASRMTSLETGTVVSGTVRSVK 183
E D+V G ++ ++ + VD D +++ +SH+ A+ ++ G+ + GTV+ +
Sbjct: 222 EKTSDVVSEGDKIKVEVLSVDLDNERISLSHKNTLPGPWANVEEQVKVGSTIEGTVKRLV 281
Query: 184 PYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
+GAFV++ GV GL+HISQI++ H+ + VL G V+ V++ + RISLS K L
Sbjct: 282 SFGAFVELLPGVEGLVHISQIANRHIGTPQEVLEIGQTVQVKVLDVSEQDQRISLSIKEL 341
Query: 361 EAE 369
E E
Sbjct: 342 EEE 344
[216][TOP]
>UniRef100_A2RLX0 30S ribosomal protein S1 n=3 Tax=Lactococcus lactis
RepID=A2RLX0_LACLM
Length = 408
Score = 91.3 bits (225), Expect = 4e-17
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 7/139 (5%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRM-------TSLETGTVVSGTVRSVKPYGA 195
VG E+ K I+V+ E + ++S R A + L+ G +V GTV V +GA
Sbjct: 151 VGEEIEAKIIEVNASENRFILSRRAVVEAEAIEMRKEAFAQLQEGDIVEGTVSRVTNFGA 210
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
FVD+GG+ GL+H+S++SH +K + PG V ++ D + GR+SLS K + P
Sbjct: 211 FVDLGGIDGLVHVSELSHSRIKRPSDAVKPGDVVNVKILKLDPEAGRLSLSLKATQPGPW 270
Query: 376 DMMTDPAAVFAVAEDTAAR 432
+ + + A V + E T R
Sbjct: 271 EQVEEKAPVGSTVEGTVKR 289
Score = 61.2 bits (147), Expect = 5e-08
Identities = 42/129 (32%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLE----TGTVVSGT 168
H ++R + G + +K +++D + +L +S + A +E G+ V GT
Sbjct: 228 HSRIKRPSDAVKPGDVVNVKILKLDPEAGRLSLSLK-ATQPGPWEQVEEKAPVGSTVEGT 286
Query: 169 VRSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISL 345
V+ + +GAFV++ GV GL+H+SQIS + V++ + VL G V V++ + RISL
Sbjct: 287 VKRLTDFGAFVELYPGVEGLVHVSQISWERVENPKDVLKVGQVVNVKVLDVKPAEERISL 346
Query: 346 STKVLEAEP 372
S K LE P
Sbjct: 347 SIKALEEAP 355
[217][TOP]
>UniRef100_Q4EP69 Ribosomal protein S1, putative (Fragment) n=1 Tax=Listeria
monocytogenes str. 1/2a F6854 RepID=Q4EP69_LISMO
Length = 355
Score = 91.3 bits (225), Expect = 4e-17
Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 7/141 (4%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPY 189
D G L K ++ + + ++++SHR + ++ ++ G V+ GTV+ + +
Sbjct: 204 DYKGTTLTFKVVEFEPENNRVILSHRAVVETEKASQKQALLSEIKEGDVIEGTVQRLANF 263
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFVDIGGV GL+HISQIS+ H+ + VL G +V V+ D + RISLS K
Sbjct: 264 GAFVDIGGVDGLVHISQISYKHIATPQEVLEEGQKVTVKVIGIDPENERISLSIKATLPG 323
Query: 370 PGDMMTDPAAVFAVAEDTAAR 432
P D +T+ A V +V E R
Sbjct: 324 PWDGITEKAQVGSVLEGKVVR 344
[218][TOP]
>UniRef100_C8JRV5 30S ribosomal protein S1 n=3 Tax=Listeria monocytogenes
RepID=C8JRV5_LISMO
Length = 381
Score = 91.3 bits (225), Expect = 4e-17
Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 7/141 (4%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPY 189
D G L K ++ + + ++++SHR + ++ ++ G V+ GTV+ + +
Sbjct: 142 DYKGTTLTFKVVEFEPENNRVILSHRAVVETEKASQKQALLSEIKEGDVIEGTVQRLANF 201
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFVDIGGV GL+HISQIS+ H+ + VL G +V V+ D + RISLS K
Sbjct: 202 GAFVDIGGVDGLVHISQISYKHIATPQEVLEEGQKVTVKVIGIDPENERISLSIKATLPG 261
Query: 370 PGDMMTDPAAVFAVAEDTAAR 432
P D +T+ A V +V E R
Sbjct: 262 PWDGITEKAQVGSVLEGKVVR 282
Score = 68.6 bits (166), Expect = 3e-10
Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTV 171
HI+ +E E+ G ++ +K I +D + +++ +S + + G+V+ G V
Sbjct: 223 HIATPQEVLEE--GQKVTVKVIGIDPENERISLSIKATLPGPWDGITEKAQVGSVLEGKV 280
Query: 172 RSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLS 348
+ +GAFV+I GV GL+HISQISH+H+ + VLS G V+ V+ ++ R+SLS
Sbjct: 281 VRLVTFGAFVEIFPGVEGLVHISQISHEHIGTPQEVLSEGQTVEVKVLEVNEADKRLSLS 340
Query: 349 TKVLEAEP 372
K L+ P
Sbjct: 341 IKELQDAP 348
[219][TOP]
>UniRef100_Q1IQQ4 SSU ribosomal protein S1P n=1 Tax=Candidatus Koribacter versatilis
Ellin345 RepID=Q1IQQ4_ACIBL
Length = 539
Score = 90.9 bits (224), Expect = 5e-17
Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRL-------AAAASRMTSLETGTVVSGTVRSVKP 186
E LVG E+ + ++D ++ +VV R A R L+ G V GTVRS+
Sbjct: 139 EKLVGSEIRCRITKIDVADEDVVVDRRAVLEEETRAQEGRRYEELQEGATVHGTVRSLAD 198
Query: 187 YGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEA 366
YGAFVDIGGV LLH+++IS V VL+ G EV+A V+ D +K RISLS K L+
Sbjct: 199 YGAFVDIGGVDALLHVAEISWSRVNSPADVLTVGQEVEAKVIKVDPEKRRISLSMKQLQP 258
Query: 367 EPGDMMTDPAAVFAVAEDTAARYL 438
P D + V T +R +
Sbjct: 259 HPWDSVPSKYKVGDRVRGTVSRLM 282
Score = 54.7 bits (130), Expect = 4e-06
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +1
Query: 148 GTVVSGTVRSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDK 324
GTV+ G V SV+ +GAFV + GV G++H+S++S V + V+ G V+A V+ D
Sbjct: 358 GTVIEGPVTSVQKFGAFVQLTEGVEGMVHVSELSDKRVDHPQDVVKLGQRVQAMVLAIDP 417
Query: 325 DKGRISLSTKVL 360
+K +I LS K L
Sbjct: 418 EKRQIKLSMKQL 429
[220][TOP]
>UniRef100_A8FEM4 Ribosomal protein S1 n=1 Tax=Bacillus pumilus SAFR-032
RepID=A8FEM4_BACP2
Length = 383
Score = 90.9 bits (224), Expect = 5e-17
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTS-------LETGTVVSGTVRSVKPY 189
D G L L +++D+++ ++++SHR ++ LE G+V+ G V+ + +
Sbjct: 142 DYKGKTLSLVVVELDREKNRVILSHRAVVEQEQLDKKQDFLQKLEVGSVIDGKVQRLTDF 201
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFVDIGG+ GL+HISQ+SH HV+ V+ G EV+ V+ D+D RISLS K
Sbjct: 202 GAFVDIGGIDGLVHISQLSHAHVEKPSDVVEEGQEVQVKVLAVDRDNERISLSIKETLPG 261
Query: 370 PGDMMTDPAAVFAVAEDTAARYLA 441
P + + V E T R ++
Sbjct: 262 PWSQIGEKVKQGDVLEGTVQRLVS 285
Score = 77.4 bits (189), Expect = 6e-13
Identities = 49/149 (32%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHR--LAAAASRM-TSLETGTVVSGTV 171
H V + + G E+ +K + VD+D +++ +S + L S++ ++ G V+ GTV
Sbjct: 221 HAHVEKPSDVVEEGQEVQVKVLAVDRDNERISLSIKETLPGPWSQIGEKVKQGDVLEGTV 280
Query: 172 RSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLS 348
+ + +GAFV+I GV GL+HISQISH H+ VL G VK V++ ++D+ RISLS
Sbjct: 281 QRLVSFGAFVEILPGVEGLVHISQISHKHIGTPHEVLEEGQTVKVKVLDVNEDEERISLS 340
Query: 349 TKVLEAEPGDMMTDPAAVFAVAEDTAARY 435
+ LE P + + + E+ + +
Sbjct: 341 IRDLEENPEKQIEENYRQYQAKEENTSGF 369
[221][TOP]
>UniRef100_C3BI75 30S ribosomal protein S1 n=1 Tax=Bacillus pseudomycoides DSM 12442
RepID=C3BI75_9BACI
Length = 382
Score = 90.9 bits (224), Expect = 5e-17
Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVEQELESKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++G V GL+HISQISHD V+ VL+ G VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGNVDGLVHISQISHDRVEQPSDVLTQGQSVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 65.1 bits (157), Expect = 3e-09
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G + +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQSVKVKVLSVDADTQRISLSIKAAQPGPWENVSAEVKAGDIREGIVKRIVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK 354
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHAAEKRISLSIK 343
[222][TOP]
>UniRef100_B4AKH1 Putative 30S ribosomal protein S1 homolog n=1 Tax=Bacillus pumilus
ATCC 7061 RepID=B4AKH1_BACPU
Length = 383
Score = 90.9 bits (224), Expect = 5e-17
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTS-------LETGTVVSGTVRSVKPY 189
D G L L +++D+++ ++++SHR ++ LE G+V+ G V+ + +
Sbjct: 142 DYKGKTLSLVVVELDREKNRVILSHRAVVEQEQLDKKQDFLQKLEVGSVIDGKVQRLTDF 201
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFVDIGG+ GL+HISQ+SH HV+ V+ G EV+ V+ D+D RISLS K
Sbjct: 202 GAFVDIGGIDGLVHISQLSHAHVEKPSDVVEEGQEVQVKVLAVDRDNERISLSIKETLPG 261
Query: 370 PGDMMTDPAAVFAVAEDTAARYLA 441
P + + V E T R ++
Sbjct: 262 PWSQIGEKVKQGDVLEGTVQRLVS 285
Score = 77.4 bits (189), Expect = 6e-13
Identities = 49/149 (32%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHR--LAAAASRM-TSLETGTVVSGTV 171
H V + + G E+ +K + VD+D +++ +S + L S++ ++ G V+ GTV
Sbjct: 221 HAHVEKPSDVVEEGQEVQVKVLAVDRDNERISLSIKETLPGPWSQIGEKVKQGDVLEGTV 280
Query: 172 RSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLS 348
+ + +GAFV+I GV GL+HISQISH H+ VL G VK V++ ++D+ RISLS
Sbjct: 281 QRLVSFGAFVEILPGVEGLVHISQISHKHIGTPHEVLEEGQTVKVKVLDVNEDEERISLS 340
Query: 349 TKVLEAEPGDMMTDPAAVFAVAEDTAARY 435
+ LE P + + + E+ + +
Sbjct: 341 IRDLEENPEKQIEENYRQYQAKEENTSGF 369
[223][TOP]
>UniRef100_C3B1G6 30S ribosomal protein S1 n=1 Tax=Bacillus mycoides Rock3-17
RepID=C3B1G6_BACMY
Length = 382
Score = 90.5 bits (223), Expect = 7e-17
Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G VV GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVEQELESKKKEAISSLKEGDVVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++G V GL+HISQISHD V+ VL+ G VK V++ D D RISLS K A+
Sbjct: 203 GAFVNVGDVDGLVHISQISHDRVEQPSDVLTQGQSVKVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 65.1 bits (157), Expect = 3e-09
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G + +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQSVKVKVLSVDADTQRISLSIKAAQPGPWENVSAEVKAGDIREGIVKRIVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK 354
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHAAEKRISLSIK 343
[224][TOP]
>UniRef100_C2E8P6 30S ribosomal protein S1 n=1 Tax=Lactobacillus ruminis ATCC 25644
RepID=C2E8P6_9LACO
Length = 395
Score = 90.5 bits (223), Expect = 7e-17
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 7/138 (5%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPYGAF 198
G EL LK ++++ E +L++SH+ R + L G VV G V + +GAF
Sbjct: 154 GQELELKIVELEPSENRLILSHKEIVQQEREANKKAVLDKLVVGDVVEGKVARLTNFGAF 213
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
+D+GGV GL+H+S+IS + V VL G +VK V+ D +K RISLS K +P D
Sbjct: 214 IDLGGVDGLVHVSEISFERVGKPSDVLKVGQDVKVKVLAVDPEKDRISLSIKQTLPQPWD 273
Query: 379 MMTDPAAVFAVAEDTAAR 432
+T+ A V E T R
Sbjct: 274 NITEKVAEGDVLEGTVKR 291
Score = 73.6 bits (179), Expect = 9e-12
Identities = 43/116 (37%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
Frame = +1
Query: 37 VGMELPLKFIQVD--QDEKKLVVSHRLAAAASRMTS-LETGTVVSGTVRSVKPYGAFVDI 207
VG ++ +K + VD +D L + L +T + G V+ GTV+ + +GAFV++
Sbjct: 242 VGQDVKVKVLAVDPEKDRISLSIKQTLPQPWDNITEKVAEGDVLEGTVKRLTSFGAFVEV 301
Query: 208 -GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEP 372
GV GL+HISQISH H+ VL+ G +VK V+N + ++ R++LS K L+ +P
Sbjct: 302 FPGVEGLVHISQISHKHIATPNEVLASGEKVKVKVLNVNAEEHRLALSIKALQEKP 357
[225][TOP]
>UniRef100_A9WBG5 RNA binding S1 domain protein n=2 Tax=Chloroflexus
RepID=A9WBG5_CHLAA
Length = 520
Score = 90.1 bits (222), Expect = 9e-17
Identities = 61/160 (38%), Positives = 89/160 (55%), Gaps = 4/160 (2%)
Frame = +1
Query: 13 RREAQEDLV--GMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKP 186
R E ED V G K +++D + ++ +S R A RM LETG ++ GTV + P
Sbjct: 246 RVEKPEDAVKVGERYQFKILEIDGEAARISLSLRRALRTQRMQQLETGQILEGTVSGIAP 305
Query: 187 YGAFVDIG-GVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLE 363
+GAFVDIG G GL+HIS ++ V+ +E V+ G +VK V+ D+ RISL+ ++ E
Sbjct: 306 FGAFVDIGVGRDGLVHISALAPHRVEKVEDVVKVGDKVKVKVLGVDQQSKRISLTMRLEE 365
Query: 364 AEP-GDMMTDPAAVFAVAEDTAARYLARVEEERAAASSVA 480
+P + T+PA AE AR R ER AA++ A
Sbjct: 366 EQPASETTTEPAT--TPAEPAPAR-AGRSNMERFAAAAQA 402
[226][TOP]
>UniRef100_C9AAP2 Ribosomal protein S1 n=3 Tax=Enterococcus casseliflavus
RepID=C9AAP2_ENTCA
Length = 404
Score = 90.1 bits (222), Expect = 9e-17
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 7/142 (4%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKP 186
ED G L K ++++ E +L++SH+ A + + L G V G V +
Sbjct: 159 EDYKGKTLTFKIVEIEPSENRLILSHKAVVEAEKAKQKEALLADLYEGQEVEGKVARLTD 218
Query: 187 YGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEA 366
+GAFVD+GG+ GL+H+S+ISH HV VLS G V +++ D DK R+SLS K
Sbjct: 219 FGAFVDLGGIDGLVHVSEISHGHVGKPSDVLSVGDTVNVRILSVDADKERVSLSIKDTLP 278
Query: 367 EPGDMMTDPAAVFAVAEDTAAR 432
P + + AAV +V T R
Sbjct: 279 GPWTNIEEQAAVGSVLTGTVKR 300
Score = 69.3 bits (168), Expect = 2e-10
Identities = 42/114 (36%), Positives = 69/114 (60%), Gaps = 5/114 (4%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLE----TGTVVSGTVRSVKPYGAFVD 204
VG + ++ + VD D++++ +S + T++E G+V++GTV+ + +GAFV+
Sbjct: 251 VGDTVNVRILSVDADKERVSLSIK-DTLPGPWTNIEEQAAVGSVLTGTVKRLTSFGAFVE 309
Query: 205 I-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLE 363
+ GV GL+HISQISH H+ VL G EV+ V+ + + RI+LS K LE
Sbjct: 310 VFPGVEGLIHISQISHKHIATPHEVLQEGDEVQVKVLEVNPSEHRIALSIKALE 363
[227][TOP]
>UniRef100_C0FW69 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans
DSM 16841 RepID=C0FW69_9FIRM
Length = 300
Score = 90.1 bits (222), Expect = 9e-17
Identities = 57/134 (42%), Positives = 83/134 (61%), Gaps = 8/134 (5%)
Frame = +1
Query: 19 EAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRS 177
E E+ +G E+ K I VD +++KLV+S + A + +++ + GTV+ GTV S
Sbjct: 145 ENTEEWIGKEVEAKVITVDPEKEKLVLSAKQVAKEAAIEERNHKISMIVPGTVMEGTVES 204
Query: 178 VKPYGAFVDIG-GVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK 354
+ PYGAF+++G G+SGL+HISQI +K VL G +VKA V+N + +K ISLS K
Sbjct: 205 LMPYGAFINLGNGLSGLVHISQICERRIKKPSEVLKEGQKVKAKVLNTNDNK--ISLSMK 262
Query: 355 VLEAEPGDMMTDPA 396
LE E D T+PA
Sbjct: 263 ALEEEMVD--TEPA 274
[228][TOP]
>UniRef100_Q2B629 30S ribosomal protein S1 n=1 Tax=Bacillus sp. NRRL B-14911
RepID=Q2B629_9BACI
Length = 385
Score = 89.7 bits (221), Expect = 1e-16
Identities = 45/122 (36%), Positives = 75/122 (61%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPY 189
D G L K +++D+++ +L++SHR + + +L+ V+ GT++ + +
Sbjct: 148 DYKGRTLSFKIVELDKEKNRLILSHRAVVEEEKGRQKQDILANLQADQVLDGTIQRITDF 207
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFVDIGG+ GL+HISQ+S++HV+ V+ G +V+ V++ D+D RISLS K E
Sbjct: 208 GAFVDIGGIDGLVHISQLSYEHVEKPSDVVEEGQKVQVKVLSVDRDNERISLSIK--ETL 265
Query: 370 PG 375
PG
Sbjct: 266 PG 267
Score = 69.3 bits (168), Expect = 2e-10
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 6/129 (4%)
Frame = +1
Query: 19 EAQEDLV--GMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLET---GTVVSGTVRSVK 183
E D+V G ++ +K + VD+D +++ +S + E G+ + G VR +
Sbjct: 231 EKPSDVVEEGQKVQVKVLSVDRDNERISLSIKETLPGPWSDIAEKAPKGSTLDGVVRRLV 290
Query: 184 PYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVL 360
YGAFV++ GV GL+HISQISH H+ VL G +V+ V++ +++ R+SLS K L
Sbjct: 291 SYGAFVEVFPGVEGLVHISQISHKHIGTPHEVLEEGQQVQVKVLDVNENDQRLSLSIKDL 350
Query: 361 EAEPGDMMT 387
E + + T
Sbjct: 351 EEKEAEYDT 359
[229][TOP]
>UniRef100_C5RC60 Ribosomal protein S1 n=1 Tax=Weissella paramesenteroides ATCC 33313
RepID=C5RC60_WEIPA
Length = 405
Score = 89.7 bits (221), Expect = 1e-16
Identities = 51/138 (36%), Positives = 73/138 (52%), Gaps = 7/138 (5%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHR-------LAAAASRMTSLETGTVVSGTVRSVKPYGAF 198
G + K I+++ + +L++S R AA A L G V+ G V + +GAF
Sbjct: 157 GQTIRAKIIEINAADSRLILSRRDVLNEERSAALARIFDELSVGDVIEGKVARMTNFGAF 216
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
+D+GGV GL+H+S+ISH+ V VLS G EVK V+ D ++ RISLS K + P D
Sbjct: 217 IDLGGVDGLVHVSEISHERVSQPSDVLSVGEEVKVKVLGLDPERERISLSIKATQPGPWD 276
Query: 379 MMTDPAAVFAVAEDTAAR 432
+ A V E T R
Sbjct: 277 AAAEKAPAGTVLEGTVKR 294
Score = 76.3 bits (186), Expect = 1e-12
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLE---TGTVVSGTVRSVKPYGAFVDI 207
VG E+ +K + +D + +++ +S + + E GTV+ GTV+ V +GAFV++
Sbjct: 245 VGEEVKVKVLGLDPERERISLSIKATQPGPWDAAAEKAPAGTVLEGTVKRVVDFGAFVEV 304
Query: 208 -GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMM 384
GV GL+H+SQISH H+ + VL G +V+ V++ + ++ R+SLS K LE P
Sbjct: 305 FPGVEGLVHVSQISHKHIANPSDVLKAGDKVQVKVLDVNPERQRLSLSIKALEEAPAHEE 364
Query: 385 TD-PAAVFAVAEDTAARYLARVEEERAAASSVADDI 489
D P + Y EE A DI
Sbjct: 365 NDRPRRSRRPRQSAPTNYSTSEEEGSATLGDAFGDI 400
[230][TOP]
>UniRef100_C2PTN4 30S ribosomal protein S1 n=1 Tax=Bacillus cereus AH621
RepID=C2PTN4_BACCE
Length = 382
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAAS-------RMTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SH+ ++SL+ G +V GTV+ + +
Sbjct: 143 DYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGDIVEGTVQRLTDF 202
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFV++GGV GL+HISQISH+ V+ VL G +V V++ D D RISLS K A+
Sbjct: 203 GAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVNVKVLSVDADTQRISLSIKA--AQ 260
Query: 370 PG 375
PG
Sbjct: 261 PG 262
Score = 63.9 bits (154), Expect = 7e-09
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G ++ +K + VD D +++ +S + A + ++ G + G V+ + +GAFV+I
Sbjct: 235 GQKVNVKVLSVDADTQRISLSIKAAQPGPWENVAGEIKAGDIREGVVKRLVTFGAFVEIL 294
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK 354
GV GL+H+SQI++ HVK+ VL G EVK V+ + RISLS K
Sbjct: 295 PGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIK 343
[231][TOP]
>UniRef100_Q92A70 Lin2052 protein n=1 Tax=Listeria innocua RepID=Q92A70_LISIN
Length = 381
Score = 89.4 bits (220), Expect = 2e-16
Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPY 189
D G L K ++ + + ++++SHR + + ++ G V+ GTV+ + +
Sbjct: 142 DYKGTTLTFKVVEFEPENNRVILSHRAVVENEKANQKQALLNEIKEGDVIEGTVQRLANF 201
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFVDIGGV GL+HISQIS+ H+ + L G +VK V+ D + RISLS K
Sbjct: 202 GAFVDIGGVDGLVHISQISYKHIATPQEALEEGQKVKVKVIGIDPENERISLSIKATLPG 261
Query: 370 PGDMMTDPAAVFAVAEDTAAR 432
P D +++ A V +V E R
Sbjct: 262 PWDGISEKAPVGSVLEGKVVR 282
Score = 71.6 bits (174), Expect = 3e-11
Identities = 45/128 (35%), Positives = 73/128 (57%), Gaps = 4/128 (3%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTV 171
HI+ +EA E+ G ++ +K I +D + +++ +S + G+V+ G V
Sbjct: 223 HIATPQEALEE--GQKVKVKVIGIDPENERISLSIKATLPGPWDGISEKAPVGSVLEGKV 280
Query: 172 RSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLS 348
+ +GAFV+I GV GL+HISQISH+H+ + VLS G V+ V+ ++D R+SLS
Sbjct: 281 VRLVTFGAFVEIFPGVEGLVHISQISHEHIGTPQEVLSEGQTVEVKVLEVNEDDKRLSLS 340
Query: 349 TKVLEAEP 372
K L+ P
Sbjct: 341 IKDLQDAP 348
[232][TOP]
>UniRef100_Q027A8 SSU ribosomal protein S1P n=1 Tax=Candidatus Solibacter usitatus
Ellin6076 RepID=Q027A8_SOLUE
Length = 572
Score = 89.4 bits (220), Expect = 2e-16
Identities = 51/128 (39%), Positives = 74/128 (57%), Gaps = 7/128 (5%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRL-------AAAASRMTSLETGTVVSGTVRSVKP 186
E LVG E+ + I++D ++ LVV R A+ R + ++ G +V GT+RS+
Sbjct: 167 EKLVGQEIRCRIIKLDVADEDLVVDRRAVLEEEERASKEQRYSQVKEGEIVHGTIRSLTD 226
Query: 187 YGAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEA 366
YGAFVDIGGV LLH++ IS V VL+ G +V+A ++ D K RISL K L+
Sbjct: 227 YGAFVDIGGVDALLHVADISWGRVNKPADVLNVGDKVEAKILKVDPAKKRISLGLKQLQP 286
Query: 367 EPGDMMTD 390
P D++ D
Sbjct: 287 HPWDLVAD 294
Score = 54.7 bits (130), Expect = 4e-06
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Frame = +1
Query: 10 VRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAA---ASRMTSLETGTVVSGTVRSV 180
+RR A G ++ + + V+ ++++ + + A A L GTV+ G V S+
Sbjct: 337 IRRPADMVKPGDQVEVVVLGVNAADRRISLGLKQALGDPWADAAQKLAVGTVIEGPVTSI 396
Query: 181 KPYGAFVDIG-GVSGLLHISQISHD-HVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK 354
+ +GAFV + GV G++H+ IS + + + V+ G VKA V+ D +K R+ L K
Sbjct: 397 QKFGAFVQVAEGVEGMVHVGDISAEKRINHPQDVVKVGQVVKAQVLELDVEKRRLRLGMK 456
Query: 355 ----------VLEAEPGDMMT 387
+ E + GD++T
Sbjct: 457 QLIPTSLDEYIAEHKEGDVVT 477
[233][TOP]
>UniRef100_A7NKT3 RNA binding S1 domain protein n=1 Tax=Roseiflexus castenholzii DSM
13941 RepID=A7NKT3_ROSCS
Length = 411
Score = 89.4 bits (220), Expect = 2e-16
Identities = 48/120 (40%), Positives = 75/120 (62%), Gaps = 7/120 (5%)
Frame = +1
Query: 34 LVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPYG 192
+VG L LK I+++++ +L++S R AA R +++L+ G V G V SV +G
Sbjct: 190 MVGQTLALKVIEINRNRNRLILSERQAAMDVREGRKGELLSALKEGDVREGVVTSVCDFG 249
Query: 193 AFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEP 372
AFVDIGG GL+H+S++S VK +L PG +V+ YV++ D ++ RI+LS K + EP
Sbjct: 250 AFVDIGGADGLVHLSELSWSRVKHPSEILKPGDKVQVYVLSIDNERKRIALSLKRTQHEP 309
[234][TOP]
>UniRef100_C2E215 30S ribosomal protein S1 n=1 Tax=Lactobacillus jensenii JV-V16
RepID=C2E215_9LACO
Length = 402
Score = 89.4 bits (220), Expect = 2e-16
Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 7/134 (5%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLET-------GTVVSGTVRSVKPYGA 195
+G + +K ++D ++ +L++SH+ R + ET G +V G V + +GA
Sbjct: 154 IGKSIKVKITEIDPNKNRLIISHKELIEEEREEAFETVASQLVAGDIVEGKVSRLTNFGA 213
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
FVD+GGV GL+HIS+IS+ H+ VL G +VK V+ D D+ RISLS K E P
Sbjct: 214 FVDVGGVDGLVHISEISYKHIDKPSDVLKTGQDVKVKVIGIDDDRHRISLSIKQTEPSPF 273
Query: 376 DMMTDPAAVFAVAE 417
+ T + V E
Sbjct: 274 EQATSELSEGEVVE 287
Score = 65.9 bits (159), Expect = 2e-09
Identities = 40/115 (34%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDIG 210
G ++ +K I +D D ++ +S + + + L G VV G V+S+ +GAFV++
Sbjct: 244 GQDVKVKVIGIDDDRHRISLSIKQTEPSPFEQATSELSEGEVVEGEVKSLTSFGAFVEVA 303
Query: 211 -GVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEP 372
G+ GL+H+S+IS+ V+ VL G VK V++ + D+ RISLS K +A+P
Sbjct: 304 DGIQGLVHVSEISNKRVEKPSDVLKVGETVKVKVLSINPDEKRISLSIK--QAQP 356
[235][TOP]
>UniRef100_A5UU17 SSU ribosomal protein S1P n=1 Tax=Roseiflexus sp. RS-1
RepID=A5UU17_ROSS1
Length = 403
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 7/120 (5%)
Frame = +1
Query: 34 LVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPYG 192
+VG L LK I+++++ +L++S R AA R +++L+ G V G V SV +G
Sbjct: 192 MVGQTLMLKVIEINRNRNRLILSERQAAMDMREGRKGELLSALKEGDVREGIVTSVCDFG 251
Query: 193 AFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEP 372
AFVDIGG GL+H+S+IS +K VL PG +V+ YV++ D ++ RI+LS K + EP
Sbjct: 252 AFVDIGGADGLVHLSEISWSRIKHPGEVLKPGDKVQVYVLSIDNERKRIALSLKRTQHEP 311
[236][TOP]
>UniRef100_C2H502 30S ribosomal protein S1 n=3 Tax=Enterococcus faecalis
RepID=C2H502_ENTFA
Length = 403
Score = 89.0 bits (219), Expect = 2e-16
Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 7/138 (5%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPYGAF 198
G L K I+++ E +L++SH+ A + ++SL G VV G V + +GAF
Sbjct: 162 GQTLAFKIIEIEPSENRLILSHKAVVEAEKESKKEELLSSLHDGDVVEGKVARLTDFGAF 221
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
+D+GGV GL+H+S+I+H HV L+ G +V+ +++ + D+GRISLS K P
Sbjct: 222 IDLGGVDGLVHVSEIAHQHVGKPSDALTVGEDVQVKILSINPDEGRISLSIKETLPGPWT 281
Query: 379 MMTDPAAVFAVAEDTAAR 432
+ AA V + T R
Sbjct: 282 DIETKAAAGTVLDGTVKR 299
Score = 76.3 bits (186), Expect = 1e-12
Identities = 46/129 (35%), Positives = 75/129 (58%), Gaps = 5/129 (3%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLET----GTVVSGT 168
H V + + VG ++ +K + ++ DE ++ +S + T +ET GTV+ GT
Sbjct: 238 HQHVGKPSDALTVGEDVQVKILSINPDEGRISLSIK-ETLPGPWTDIETKAAAGTVLDGT 296
Query: 169 VRSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISL 345
V+ + +GAFV++ GV GL+HISQISH H+ VL G +V+ V+ + ++ RI+L
Sbjct: 297 VKRLTSFGAFVEVFPGVEGLVHISQISHKHIATPHEVLHEGDQVQVKVLEVNPEEHRIAL 356
Query: 346 STKVLEAEP 372
S K LE +P
Sbjct: 357 SIKALEPKP 365
[237][TOP]
>UniRef100_Q03F88 SSU ribosomal protein S1P n=1 Tax=Pediococcus pentosaceus ATCC
25745 RepID=Q03F88_PEDPA
Length = 402
Score = 88.6 bits (218), Expect = 3e-16
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 7/138 (5%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPYGAF 198
G L +K I+V ++ +L++SH+ A R + S++ G VV+G V + +GAF
Sbjct: 160 GQTLKVKIIEVKPEDNRLILSHKAVLNAEREAKRGEVLASIKEGDVVTGKVARLTNFGAF 219
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
VD+GG+ GL+HIS+IS+ V VL G EV+ V++ D +K R+SLS K + P D
Sbjct: 220 VDLGGIDGLVHISEISYQRVDKPSDVLKAGEEVQVKVLSVDAEKERVSLSIKQTQPGPWD 279
Query: 379 MMTDPAAVFAVAEDTAAR 432
+ + A AV + R
Sbjct: 280 NIEENAPEGAVLDGKVKR 297
Score = 66.6 bits (161), Expect = 1e-09
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLET---GTVVSGTVRSVKPYGAFVDI- 207
G E+ +K + VD +++++ +S + E G V+ G V+ + +GAFV++
Sbjct: 249 GEEVQVKVLSVDAEKERVSLSIKQTQPGPWDNIEENAPEGAVLDGKVKRLTDFGAFVEVF 308
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GV GL+HISQISH H+ VL G ++K V+ + R++LS K LE P +
Sbjct: 309 PGVEGLVHISQISHKHIATPADVLKEGQDIKVKVLEVHPAEHRLALSIKALEEAPKNEKK 368
Query: 388 DPAAVFAVAEDTAARYLARVEEERAAASSVADDIVSSLD 504
A ++D E A ++ D I SLD
Sbjct: 369 TEAPAADFSKDM---------PEEATGFTLGDIIGKSLD 398
[238][TOP]
>UniRef100_Q0DGF0 Os05g0535800 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q0DGF0_ORYSJ
Length = 592
Score = 88.6 bits (218), Expect = 3e-16
Identities = 63/178 (35%), Positives = 99/178 (55%), Gaps = 13/178 (7%)
Frame = +1
Query: 28 EDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
++ VG ++ + ++D+ +L++S + A A MT L GT++ GTVR + PYGA + I
Sbjct: 329 KNTVGQQIHVCITRIDEKANELIISEKEAWA---MTYLREGTLLQGTVRKLFPYGAQITI 385
Query: 208 GGVS--GLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDM 381
G + GLLH+S I+ + + VL G EVKA V+ + GRI+LSTK LE+EPG
Sbjct: 386 GDTNRGGLLHVSNITRGQLTSVGDVLKVGEEVKAIVI-KSTAPGRIALSTKDLESEPGLF 444
Query: 382 MTDPA----------AVFAVAEDTAARYLARVEEERAAASSVADDIVSSLD-IASLDD 522
+++ VF+ AE+ A RY ++ E+ A ++ SS D +A DD
Sbjct: 445 LSNKEWDGEYTDVNNKVFSEAEEMAQRYRDQISEKHQPA-----ELDSSFDEVAPFDD 497
[239][TOP]
>UniRef100_C7XZA5 Ribosomal protein S1 n=2 Tax=Lactobacillus jensenii
RepID=C7XZA5_9LACO
Length = 402
Score = 88.2 bits (217), Expect = 4e-16
Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 7/134 (5%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLET-------GTVVSGTVRSVKPYGA 195
+G + +K ++D ++ +L++SH+ R + ET G +V G V + +GA
Sbjct: 154 IGKTIKVKITEIDPNKNRLILSHKELIEEEREEAFETVASQLVAGDIVEGKVSRLTNFGA 213
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
FVD+GGV GL+HIS+IS+ H+ VL G +VK V+ D D+ RISLS K E P
Sbjct: 214 FVDVGGVDGLVHISEISYKHIDKPSDVLKTGQDVKVKVIGIDDDRHRISLSIKQTEPSPF 273
Query: 376 DMMTDPAAVFAVAE 417
+ T + V E
Sbjct: 274 EQATSELSEGEVVE 287
Score = 65.9 bits (159), Expect = 2e-09
Identities = 40/115 (34%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDIG 210
G ++ +K I +D D ++ +S + + + L G VV G V+S+ +GAFV++
Sbjct: 244 GQDVKVKVIGIDDDRHRISLSIKQTEPSPFEQATSELSEGEVVEGEVKSLTSFGAFVEVA 303
Query: 211 -GVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEP 372
G+ GL+H+S+IS+ V+ VL G VK V++ + D+ RISLS K +A+P
Sbjct: 304 DGIQGLVHVSEISNKRVEKPSDVLKVGETVKVKVLSINPDEKRISLSIK--QAQP 356
[240][TOP]
>UniRef100_C7HCZ9 RNA binding S1 domain protein n=1 Tax=Clostridium thermocellum DSM
2360 RepID=C7HCZ9_CLOTM
Length = 419
Score = 88.2 bits (217), Expect = 4e-16
Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Frame = +1
Query: 49 LPLKFIQVDQDEKKLVVSHRL-------AAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
+ ++ +++++ +K+V S R+ A A S+E G V GTV+S+ +GAFVDI
Sbjct: 169 ITVRILELNEKRRKVVGSARVIIEEEKEALANRTWNSMEVGKVFKGTVKSLTDFGAFVDI 228
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GGV GL+HIS++S VK VL G EV+ V+ DK+K ++SL + +E P +
Sbjct: 229 GGVDGLIHISELSWTRVKHPSEVLKVGDEVEVTVLEFDKEKKKVSLGYRKMEDNPWYKIE 288
Query: 388 DPAAVFAVAEDTAARYL---ARVEEERAAASSVADDIVSSLDIASLDD-LXLGVDV 543
+ V V + T R+ A VE E+ V +SS +A ++D L +G+ V
Sbjct: 289 EKYKVGDVVKVTVLRFAPFGAFVELEKGVDGLVHISQISSKRLAKVEDALEIGMKV 344
Score = 64.7 bits (156), Expect = 4e-09
Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 8/161 (4%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLE---TGTVVSGTVRSVKPYGAFVDI 207
VG E+ + ++ D+++KK+ + +R E G VV TV P+GAFV++
Sbjct: 254 VGDEVEVTVLEFDKEKKKVSLGYRKMEDNPWYKIEEKYKVGDVVKVTVLRFAPFGAFVEL 313
Query: 208 G-GVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK-VLEAEPGDM 381
GV GL+HISQIS + +E L GM+V A ++ D + +ISLS K V+ +P
Sbjct: 314 EKGVDGLVHISQISSKRLAKVEDALEIGMKVDAKIIEVDGENKKISLSIKEVMPIDPPSS 373
Query: 382 MTDPAAV-FAVAEDTAARYLARVE--EERAAASSVADDIVS 495
++ A + A++T+A E E R + +D+VS
Sbjct: 374 KSESKAKDGSEAKETSANTEEEAEPTEHREDMNVTVEDLVS 414
[241][TOP]
>UniRef100_C5G380 30S ribosomal protein S1 n=3 Tax=Lactobacillus jensenii
RepID=C5G380_9LACO
Length = 402
Score = 88.2 bits (217), Expect = 4e-16
Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 7/134 (5%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLET-------GTVVSGTVRSVKPYGA 195
+G + +K ++D ++ +L++SH+ R + ET G +V G V + +GA
Sbjct: 154 IGKTIKVKITEIDPNKNRLILSHKELIEEEREEAFETVASQLVAGDIVEGKVSRLTNFGA 213
Query: 196 FVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPG 375
FVD+GGV GL+HIS+IS+ H+ VL G +VK V+ D D+ RISLS K E P
Sbjct: 214 FVDVGGVDGLVHISEISYKHIDKPSDVLKTGQDVKVKVIGIDDDRHRISLSIKQTEPSPF 273
Query: 376 DMMTDPAAVFAVAE 417
+ T + V E
Sbjct: 274 EQATSELSEGEVVE 287
Score = 67.8 bits (164), Expect = 5e-10
Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDIG 210
G ++ +K I +D D ++ +S + + + L G VV G V+S+ +GAFV++
Sbjct: 244 GQDVKVKVIGIDDDRHRISLSIKQTEPSPFEQATSELSEGEVVEGEVKSLTSFGAFVEVA 303
Query: 211 -GVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEP 372
G+ GL+H+S+IS+ V+ VL G VK V+N + D+ RISLS K +A+P
Sbjct: 304 DGIQGLVHVSEISNKRVEKPSDVLKVGETVKVKVLNINPDEKRISLSIK--QAQP 356
[242][TOP]
>UniRef100_C4GJZ2 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147
RepID=C4GJZ2_9NEIS
Length = 557
Score = 88.2 bits (217), Expect = 4e-16
Identities = 48/118 (40%), Positives = 70/118 (59%), Gaps = 7/118 (5%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPYGAF 198
G E+ K I++D+ +VVS R A+ M +L+ GT+V G V+++ YGAF
Sbjct: 148 GKEVEFKVIKLDRKRNNVVVSRRAVLEATLGEERKALMETLQEGTIVKGIVKNITDYGAF 207
Query: 199 VDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEP 372
VD+GG+ GLLHI+ ++ VK VL G EV+A V+ D+DK R+SL K L +P
Sbjct: 208 VDLGGIDGLLHITDLAWRRVKHPSEVLEVGKEVEAKVLRFDQDKQRVSLGLKQLGEDP 265
Score = 56.2 bits (134), Expect = 1e-06
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 8/163 (4%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRM---TSLETGTVVSGTVRSVKPYGAFVDI 207
+G E+ + + +D+D++++ + + A + + G + GTV+S+ +G FV +
Sbjct: 323 LGDEVEVMILDIDEDKRRISLGMKQCQANPWLEFEANYNKGDKLKGTVKSITDFGVFVGL 382
Query: 208 -GGVSGLLHISQISHDHVKDIEAV--LSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGD 378
G + GL+H+S +S + EAV G EV+ V+ D +K RISL K LE
Sbjct: 383 PGNIDGLVHLSDLSWTESGE-EAVRKYKKGEEVETVVLAIDVEKERISLGIKQLEG---- 437
Query: 379 MMTDPAAVFAVAEDTAARYLARVE--EERAAASSVADDIVSSL 501
DP F D A V+ E + A ++AD++ + L
Sbjct: 438 ---DPFNNFLSVNDKGALVKGTVKSVEAKGAVVALADEVEAYL 477
[243][TOP]
>UniRef100_A3DDC0 Hydroxymethylbutenyl pyrophosphate reductase n=2 Tax=Clostridium
thermocellum RepID=A3DDC0_CLOTH
Length = 694
Score = 88.2 bits (217), Expect = 4e-16
Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Frame = +1
Query: 49 LPLKFIQVDQDEKKLVVSHRL-------AAAASRMTSLETGTVVSGTVRSVKPYGAFVDI 207
+ ++ +++++ +K+V S R+ A A S+E G V GTV+S+ +GAFVDI
Sbjct: 444 ITVRILELNEKRRKVVGSARVIIEEEKEALANRTWNSMEVGKVFKGTVKSLTDFGAFVDI 503
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMT 387
GGV GL+HIS++S VK VL G EV+ V+ DK+K ++SL + +E P +
Sbjct: 504 GGVDGLIHISELSWTRVKHPSEVLKVGDEVEVTVLEFDKEKKKVSLGYRKMEDNPWYKIE 563
Query: 388 DPAAVFAVAEDTAARYL---ARVEEERAAASSVADDIVSSLDIASLDD-LXLGVDV 543
+ V V + T R+ A VE E+ V +SS +A ++D L +G+ V
Sbjct: 564 EKYKVGDVVKVTVLRFAPFGAFVELEKGVDGLVHISQISSKRLAKVEDALEIGMKV 619
Score = 64.7 bits (156), Expect = 4e-09
Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 8/161 (4%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLE---TGTVVSGTVRSVKPYGAFVDI 207
VG E+ + ++ D+++KK+ + +R E G VV TV P+GAFV++
Sbjct: 529 VGDEVEVTVLEFDKEKKKVSLGYRKMEDNPWYKIEEKYKVGDVVKVTVLRFAPFGAFVEL 588
Query: 208 G-GVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTK-VLEAEPGDM 381
GV GL+HISQIS + +E L GM+V A ++ D + +ISLS K V+ +P
Sbjct: 589 EKGVDGLVHISQISSKRLAKVEDALEIGMKVDAKIIEVDGENKKISLSIKEVMPIDPPSS 648
Query: 382 MTDPAAV-FAVAEDTAARYLARVE--EERAAASSVADDIVS 495
++ A + A++T+A E E R + +D+VS
Sbjct: 649 KSESKAKDGSEAKETSANTEEEAEPTEHREDMNVTVEDLVS 689
[244][TOP]
>UniRef100_UPI0001B430B6 30S ribosomal protein S1 n=1 Tax=Listeria monocytogenes FSL N1-017
RepID=UPI0001B430B6
Length = 381
Score = 87.8 bits (216), Expect = 5e-16
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 7/141 (4%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPY 189
D G L K ++ + + ++++SHR + ++ ++ G V+ GTV+ + +
Sbjct: 142 DYKGTTLTFKVVEFEPENNRVILSHRAVVETEKASQKQALLSEIKEGDVIEGTVQRLANF 201
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFVDIGGV GL+HISQIS+ H+ + L G +V V+ D + RISLS K
Sbjct: 202 GAFVDIGGVDGLVHISQISYKHIATPQEALEEGQKVTVKVIGIDPENERISLSIKATLPG 261
Query: 370 PGDMMTDPAAVFAVAEDTAAR 432
P D + + A V +V E R
Sbjct: 262 PWDGIAEKAPVGSVLEGKVVR 282
Score = 68.2 bits (165), Expect = 4e-10
Identities = 45/128 (35%), Positives = 73/128 (57%), Gaps = 4/128 (3%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLE---TGTVVSGTV 171
HI+ +EA E+ G ++ +K I +D + +++ +S + E G+V+ G V
Sbjct: 223 HIATPQEALEE--GQKVTVKVIGIDPENERISLSIKATLPGPWDGIAEKAPVGSVLEGKV 280
Query: 172 RSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLS 348
+ +GAFV+I GV GL+HISQISH+H+ + VLS G V+ V+ ++ R+SLS
Sbjct: 281 VRLVTFGAFVEIFEGVEGLVHISQISHEHIGTPQEVLSEGQTVEVKVLEVNEVDKRLSLS 340
Query: 349 TKVLEAEP 372
K L+ P
Sbjct: 341 IKELKDAP 348
[245][TOP]
>UniRef100_UPI000169626A 30S ribosomal protein S1 n=1 Tax=Listeria monocytogenes FSL J2-064
RepID=UPI000169626A
Length = 381
Score = 87.8 bits (216), Expect = 5e-16
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 7/141 (4%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPY 189
D G L K ++ + + ++++SHR + ++ ++ G V+ GTV+ + +
Sbjct: 142 DYKGTTLTFKVVEFEPENNRVILSHRAVVETEKASQKQALLSEIKEGDVIEGTVQRLANF 201
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFVDIGGV GL+HISQIS+ H+ + L G +V V+ D + RISLS K
Sbjct: 202 GAFVDIGGVDGLVHISQISYKHIATPQEALEEGQKVTVKVIGIDPENERISLSIKATLPG 261
Query: 370 PGDMMTDPAAVFAVAEDTAAR 432
P D + + A V +V E R
Sbjct: 262 PWDGIAEKAPVGSVLEGKVVR 282
Score = 68.6 bits (166), Expect = 3e-10
Identities = 45/128 (35%), Positives = 73/128 (57%), Gaps = 4/128 (3%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLE---TGTVVSGTV 171
HI+ +EA E+ G ++ +K I +D + +++ +S + E G+V+ G V
Sbjct: 223 HIATPQEALEE--GQKVTVKVIGIDPENERISLSIKATLPGPWDGIAEKAPVGSVLEGKV 280
Query: 172 RSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLS 348
+ +GAFV+I GV GL+HISQISH+H+ + VLS G V+ V+ ++ R+SLS
Sbjct: 281 VRLVTFGAFVEIFPGVEGLVHISQISHEHIGTPQEVLSEGQTVEVKVLEVNEADKRLSLS 340
Query: 349 TKVLEAEP 372
K L+ P
Sbjct: 341 IKELKDAP 348
[246][TOP]
>UniRef100_C5D3G4 RNA binding S1 domain protein n=1 Tax=Geobacillus sp. WCH70
RepID=C5D3G4_GEOSW
Length = 387
Score = 87.8 bits (216), Expect = 5e-16
Identities = 47/122 (38%), Positives = 72/122 (59%), Gaps = 7/122 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPY 189
D G L +K +++++++ ++++SHR + ++ LE G V+ GTVR V +
Sbjct: 147 DYKGKTLAVKVVELNREKNRIILSHRAVVEEEQERKHKEALSRLEPGQVLEGTVRRVTDF 206
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
G FVD+GG GL+HISQ+SH V V+ G VK V+ D++ GR+SLS K EA
Sbjct: 207 GVFVDVGGFDGLVHISQLSHTRVAHPSEVVKEGETVKVKVLAVDEENGRVSLSIK--EAM 264
Query: 370 PG 375
PG
Sbjct: 265 PG 266
Score = 63.5 bits (153), Expect = 9e-09
Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 4/127 (3%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTV 171
H V ++ G + +K + VD++ ++ +S + A + G +V+G V
Sbjct: 226 HTRVAHPSEVVKEGETVKVKVLAVDEENGRVSLSIKEAMPGPWEGIAEKVAPGDIVTGKV 285
Query: 172 RSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLS 348
+ + P+GAFV+I GV GL+HISQIS+ + VL G EVKA V++ ++ + RISLS
Sbjct: 286 KRLVPFGAFVEIFPGVEGLVHISQISNKRIGTPHEVLKEGEEVKAKVLDVNEAERRISLS 345
Query: 349 TKVLEAE 369
+ L E
Sbjct: 346 MRELIEE 352
[247][TOP]
>UniRef100_B8DBY8 Putative 30S ribosomal protein S1-like protein n=1 Tax=Listeria
monocytogenes HCC23 RepID=B8DBY8_LISMH
Length = 381
Score = 87.8 bits (216), Expect = 5e-16
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 7/141 (4%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPY 189
D G L K ++ + + ++++SHR + ++ ++ G V+ GTV+ + +
Sbjct: 142 DYKGTTLTFKVVEFEPENNRVILSHRAVVETEKASQKQALLSEIKEGDVIEGTVQRLANF 201
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFVDIGGV GL+HISQIS+ H+ + L G +V V+ D + RISLS K
Sbjct: 202 GAFVDIGGVDGLVHISQISYKHIATPQEALEEGQKVTVKVIGIDPENERISLSIKATLPG 261
Query: 370 PGDMMTDPAAVFAVAEDTAAR 432
P D + + A V +V E R
Sbjct: 262 PWDGIAEKAPVGSVLEGKVVR 282
Score = 68.6 bits (166), Expect = 3e-10
Identities = 45/128 (35%), Positives = 73/128 (57%), Gaps = 4/128 (3%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLE---TGTVVSGTV 171
HI+ +EA E+ G ++ +K I +D + +++ +S + E G+V+ G V
Sbjct: 223 HIATPQEALEE--GQKVTVKVIGIDPENERISLSIKATLPGPWDGIAEKAPVGSVLEGKV 280
Query: 172 RSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLS 348
+ +GAFV+I GV GL+HISQISH+H+ + VLS G V+ V+ ++ R+SLS
Sbjct: 281 VRLVTFGAFVEIFEGVEGLVHISQISHEHIGTPQEVLSEGQTVEVKVLEVNEADKRLSLS 340
Query: 349 TKVLEAEP 372
K L+ P
Sbjct: 341 IKELKDAP 348
[248][TOP]
>UniRef100_A5I0Z9 30S ribosomal protein S1 n=1 Tax=Clostridium botulinum A str. Hall
RepID=A5I0Z9_CLOBH
Length = 381
Score = 87.8 bits (216), Expect = 5e-16
Identities = 49/134 (36%), Positives = 80/134 (59%), Gaps = 7/134 (5%)
Frame = +1
Query: 58 KFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPYGAFVDIGGV 216
+ I++D+ ++K+V+S R+ + SLE G + G VR ++ +GAFVDIGG+
Sbjct: 155 RLIELDKQKRKIVLSSRVVKEEEEAKRKEELLNSLEKGQKIEGVVRRLEKFGAFVDIGGM 214
Query: 217 SGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEPGDMMTDPA 396
GL+H SQ+S V V+S G +V+ YV++ DKD +I+LS K ++ +P + + D
Sbjct: 215 DGLVHNSQLSWGRVNHPSEVVSIGDKVEVYVLDFDKDTKKIALSLKDVKKDPWNTVKDKY 274
Query: 397 AVFAVAEDTAARYL 438
AV +V E T + L
Sbjct: 275 AVGSVIEGTIVKLL 288
Score = 59.3 bits (142), Expect = 2e-07
Identities = 35/116 (30%), Positives = 65/116 (56%), Gaps = 4/116 (3%)
Frame = +1
Query: 37 VGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLE---TGTVVSGTVRSVKPYGAFVDI 207
+G ++ + + D+D KK+ +S + T + G+V+ GT+ + +GAFV++
Sbjct: 237 IGDKVEVYVLDFDKDTKKIALSLKDVKKDPWNTVKDKYAVGSVIEGTIVKLLNFGAFVEV 296
Query: 208 -GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAEP 372
G+ GL+HIS+I+ +H+ L+ G +VK V+ + D+ R+SLS K +P
Sbjct: 297 ENGIEGLVHISEITDEHIAKPSEKLNIGDKVKVKVLEVNSDEKRMSLSIKEATEKP 352
[249][TOP]
>UniRef100_C8K2C4 30S ribosomal protein S1 n=3 Tax=Listeria monocytogenes
RepID=C8K2C4_LISMO
Length = 381
Score = 87.8 bits (216), Expect = 5e-16
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 7/141 (4%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPY 189
D G L K ++ + + ++++SHR + ++ ++ G V+ GTV+ + +
Sbjct: 142 DYKGTTLTFKVVEFEPENNRVILSHRAVVETEKASQKQALLSEIKEGDVIEGTVQRLANF 201
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
GAFVDIGGV GL+HISQIS+ H+ + L G +V V+ D + RISLS K
Sbjct: 202 GAFVDIGGVDGLVHISQISYKHIATPQEALEEGQKVTVKVIGIDPENERISLSIKATLPG 261
Query: 370 PGDMMTDPAAVFAVAEDTAAR 432
P D + + A V +V E R
Sbjct: 262 PWDGIAEKAPVGSVLEGKVVR 282
Score = 68.6 bits (166), Expect = 3e-10
Identities = 45/128 (35%), Positives = 73/128 (57%), Gaps = 4/128 (3%)
Frame = +1
Query: 1 HISVRREAQEDLVGMELPLKFIQVDQDEKKLVVSHRLAAAASRMTSLE---TGTVVSGTV 171
HI+ +EA E+ G ++ +K I +D + +++ +S + E G+V+ G V
Sbjct: 223 HIATPQEALEE--GQKVTVKVIGIDPENERISLSIKATLPGPWDGIAEKAPVGSVLEGKV 280
Query: 172 RSVKPYGAFVDI-GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLS 348
+ +GAFV+I GV GL+HISQISH+H+ + VLS G V+ V+ ++ R+SLS
Sbjct: 281 VRLVTFGAFVEIFPGVEGLVHISQISHEHIGTPQEVLSEGQTVEVKVLEVNEADKRLSLS 340
Query: 349 TKVLEAEP 372
K L+ P
Sbjct: 341 IKELKDAP 348
[250][TOP]
>UniRef100_C6QPH8 RNA binding S1 domain protein n=1 Tax=Geobacillus sp. Y4.1MC1
RepID=C6QPH8_9BACI
Length = 387
Score = 87.8 bits (216), Expect = 5e-16
Identities = 45/130 (34%), Positives = 74/130 (56%), Gaps = 7/130 (5%)
Frame = +1
Query: 31 DLVGMELPLKFIQVDQDEKKLVVSHRLAAAASR-------MTSLETGTVVSGTVRSVKPY 189
D G L +K +++D+++ ++++SHR + ++ LETG V+ G VR + +
Sbjct: 147 DYKGKPLAVKVVELDREKNRVILSHRAVVEEEQERQRKEALSRLETGQVLEGIVRRITDF 206
Query: 190 GAFVDIGGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
G FVD+GG GL+HISQ+SH V V+ G VK V++ D++ GR+SLS K
Sbjct: 207 GVFVDVGGFDGLVHISQLSHTRVAHPSDVVQEGETVKVKVLSVDEENGRVSLSIKEALPS 266
Query: 370 PGDMMTDPAA 399
P + + + A
Sbjct: 267 PWEGIAEKIA 276
Score = 61.6 bits (148), Expect = 4e-08
Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Frame = +1
Query: 40 GMELPLKFIQVDQDEKKLVVSHRLAAAA---SRMTSLETGTVVSGTVRSVKPYGAFVDI- 207
G + +K + VD++ ++ +S + A + + G +V+G V+ + P+GAFV+I
Sbjct: 239 GETVKVKVLSVDEENGRVSLSIKEALPSPWEGIAEKIAPGDIVTGKVKRLVPFGAFVEIF 298
Query: 208 GGVSGLLHISQISHDHVKDIEAVLSPGMEVKAYVMNQDKDKGRISLSTKVLEAE 369
G+ GL+HISQIS + VL G EVKA V++ + + RISLS + L E
Sbjct: 299 PGIEGLVHISQISTKRIGTPHEVLKEGEEVKAKVLDVSEAERRISLSIRDLIEE 352