AU196506 ( PFL090e09_r )

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[1][TOP]
>UniRef100_Q1L5B0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Platanus orientalis
           RepID=Q1L5B0_PLAOI
          Length = 923

 Score =  199 bits (506), Expect = 8e-50
 Identities = 98/152 (64%), Positives = 119/152 (78%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 182 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 241

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GKEV
Sbjct: 242 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKEV 301

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 302 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 332

[2][TOP]
>UniRef100_Q1L6D2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Euptelea polyandra
           RepID=Q1L6D2_9MAGN
          Length = 874

 Score =  198 bits (503), Expect = 2e-49
 Identities = 97/152 (63%), Positives = 119/152 (78%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 329

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360

[3][TOP]
>UniRef100_Q1L6C4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hibbertia scandens
           RepID=Q1L6C4_9MAGN
          Length = 873

 Score =  198 bits (503), Expect = 2e-49
 Identities = 97/152 (63%), Positives = 119/152 (78%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 329

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360

[4][TOP]
>UniRef100_Q1L5Z7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Berberidopsis
           corallina RepID=Q1L5Z7_9MAGN
          Length = 853

 Score =  198 bits (503), Expect = 2e-49
 Identities = 97/152 (63%), Positives = 119/152 (78%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 329

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360

[5][TOP]
>UniRef100_Q1L5Z6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Berberidopsis
           beckleri RepID=Q1L5Z6_9MAGN
          Length = 873

 Score =  198 bits (503), Expect = 2e-49
 Identities = 97/152 (63%), Positives = 119/152 (78%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 329

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360

[6][TOP]
>UniRef100_Q1L5A8 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Nymphaea colorata RepID=Q1L5A8_9MAGN
          Length = 431

 Score =  198 bits (503), Expect = 2e-49
 Identities = 97/152 (63%), Positives = 119/152 (78%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VT+ KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ K  +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKTYVQKCVDNGKDV 329

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360

[7][TOP]
>UniRef100_A7PJ31 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
           RepID=A7PJ31_VITVI
          Length = 1220

 Score =  198 bits (503), Expect = 2e-49
 Identities = 97/152 (63%), Positives = 119/152 (78%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 316 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 375

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 376 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 435

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 436 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 466

[8][TOP]
>UniRef100_A5C1N0 DNA-directed RNA polymerase n=2 Tax=Vitis RepID=A5C1N0_VITVI
          Length = 1193

 Score =  198 bits (503), Expect = 2e-49
 Identities = 97/152 (63%), Positives = 119/152 (78%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 316 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 375

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 376 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 435

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 436 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 466

[9][TOP]
>UniRef100_Q1L6B6 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Nepenthes maxima RepID=Q1L6B6_9CARY
          Length = 667

 Score =  197 bits (501), Expect = 3e-49
 Identities = 97/152 (63%), Positives = 118/152 (77%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG TV VTR KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 211 VIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 270

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 271 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDQGKDV 330

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 331 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 361

[10][TOP]
>UniRef100_Q1L6D6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dillenia
           suffruticosa RepID=Q1L6D6_9MAGN
          Length = 868

 Score =  196 bits (499), Expect = 5e-49
 Identities = 97/152 (63%), Positives = 119/152 (78%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 205 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 264

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 265 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDV 324

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 325 NLQFA-IKAKPITSGLKYSLATGNWGQANAAG 355

[11][TOP]
>UniRef100_Q1L6A5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetracentron sinense
           RepID=Q1L6A5_9MAGN
          Length = 951

 Score =  196 bits (499), Expect = 5e-49
 Identities = 96/152 (63%), Positives = 119/152 (78%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  A+GR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 270 HRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDV 329

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360

[12][TOP]
>UniRef100_Q1L5B2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Eschscholzia
           californica RepID=Q1L5B2_ESCCA
          Length = 951

 Score =  196 bits (499), Expect = 5e-49
 Identities = 96/152 (63%), Positives = 119/152 (78%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VTR KRI+YA++IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYII 269

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  A+GR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GKEV
Sbjct: 270 HRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKEV 329

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360

[13][TOP]
>UniRef100_Q1L6F0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Aextoxicon punctatum
           RepID=Q1L6F0_9MAGN
          Length = 873

 Score =  196 bits (498), Expect = 7e-49
 Identities = 96/152 (63%), Positives = 118/152 (77%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+  VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 210 VIQNHQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 329

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360

[14][TOP]
>UniRef100_Q1L6E0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coriaria sarmentosa
           RepID=Q1L6E0_9ROSI
          Length = 952

 Score =  196 bits (498), Expect = 7e-49
 Identities = 97/152 (63%), Positives = 118/152 (77%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG TV VTR KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYII 269

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDV 329

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360

[15][TOP]
>UniRef100_Q1L6C9 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Gunnera
           chilensis RepID=Q1L6C9_GUNCH
          Length = 453

 Score =  196 bits (498), Expect = 7e-49
 Identities = 95/152 (62%), Positives = 119/152 (78%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VT+ KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  A+GR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 270 HRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 329

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360

[16][TOP]
>UniRef100_Q1L5B1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Liriodendron
           tulipifera RepID=Q1L5B1_LIRTU
          Length = 942

 Score =  196 bits (497), Expect = 9e-49
 Identities = 96/152 (63%), Positives = 118/152 (77%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG TV VT+ KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 202 VIQNQQVALDYIGKRGQTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 261

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 262 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDV 321

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 322 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 352

[17][TOP]
>UniRef100_A4RQU3 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus
           CCE9901 RepID=A4RQU3_OSTLU
          Length = 1174

 Score =  196 bits (497), Expect = 9e-49
 Identities = 96/151 (63%), Positives = 119/151 (78%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQSQ+VALD+IGKRG+ V V+R KRI+YAK+IL KE LPHVGV E  E +K +F GY+I
Sbjct: 307 VIQSQEVALDFIGKRGSAVGVSREKRIKYAKEILQKELLPHVGVREDCETKKAYFLGYMI 366

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  +LGR+PEDDRDHYGNKR+DL GPLLA LFRQ FR++TK+ ++  QR +D+GKE+
Sbjct: 367 HRLLLCSLGRRPEDDRDHYGNKRLDLGGPLLAQLFRQLFRKLTKDVRLYCQRCIDSGKEI 426

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
            L    IK+  IT+GLK+ LATGNW S   A
Sbjct: 427 QLQLA-IKAKTITQGLKYSLATGNWGSQGAA 456

[18][TOP]
>UniRef100_P38420 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Arabidopsis
           thaliana RepID=RPB2_ARATH
          Length = 1188

 Score =  196 bits (497), Expect = 9e-49
 Identities = 96/152 (63%), Positives = 118/152 (77%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG TV VT+ KRI+YA+DIL KE LPHVG+GE  E +K ++FGY+I
Sbjct: 315 VIQNQLVALDYIGKRGATVGVTKEKRIKYARDILQKEMLPHVGIGEHCETKKAYYFGYII 374

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GKEV
Sbjct: 375 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEV 434

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 435 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 465

[19][TOP]
>UniRef100_Q01GR3 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri
           RepID=Q01GR3_OSTTA
          Length = 999

 Score =  195 bits (496), Expect = 1e-48
 Identities = 95/147 (64%), Positives = 118/147 (80%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQSQ+VALD+IGKRG+ V V+R KRI+YAK+IL KE LPHVGV E  E +K +F GY+I
Sbjct: 153 VIQSQEVALDFIGKRGSAVGVSREKRIKYAKEILQKELLPHVGVREDCETKKAYFLGYMI 212

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  +LGR+PEDDRDHYGNKR+DL GPLLA LFRQ FR++TK+ ++  QR +D+GKE+
Sbjct: 213 HRLLLCSLGRRPEDDRDHYGNKRLDLGGPLLAQLFRQLFRKLTKDVRLYCQRCIDSGKEI 272

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSS 441
            L    IK+  IT+GLK+ LATGNW S
Sbjct: 273 QLQLA-IKAKTITQGLKYSLATGNWGS 298

[20][TOP]
>UniRef100_Q1L6B7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nelumbo nucifera
           RepID=Q1L6B7_NELNU
          Length = 865

 Score =  195 bits (495), Expect = 1e-48
 Identities = 96/152 (63%), Positives = 118/152 (77%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 202 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 261

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+ EDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 262 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 321

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 322 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 352

[21][TOP]
>UniRef100_B9FA12 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
           RepID=B9FA12_ORYSJ
          Length = 1218

 Score =  195 bits (495), Expect = 1e-48
 Identities = 96/152 (63%), Positives = 118/152 (77%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG TV VT+ KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 344 VIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYII 403

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+ EDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GKEV
Sbjct: 404 HRLLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEV 463

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW    +AG
Sbjct: 464 NLQFA-IKAKTITSGLKYSLATGNWGQANQAG 494

[22][TOP]
>UniRef100_Q10G20 DNA-directed RNA polymerase n=2 Tax=Oryza sativa RepID=Q10G20_ORYSJ
          Length = 1222

 Score =  195 bits (495), Expect = 1e-48
 Identities = 96/152 (63%), Positives = 118/152 (77%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG TV VT+ KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 348 VIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYII 407

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+ EDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GKEV
Sbjct: 408 HRLLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEV 467

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW    +AG
Sbjct: 468 NLQFA-IKAKTITSGLKYSLATGNWGQANQAG 498

[23][TOP]
>UniRef100_Q1L6D7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dicentra formosa
           RepID=Q1L6D7_9MAGN
          Length = 873

 Score =  194 bits (494), Expect = 2e-48
 Identities = 94/152 (61%), Positives = 119/152 (78%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VT+ KRI+YA++IL KE LPHVG+GE  E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGIGEYCETKKAYYFGYII 269

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDV 329

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360

[24][TOP]
>UniRef100_Q1L6E4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Chimonanthus praecox
           RepID=Q1L6E4_9MAGN
          Length = 906

 Score =  194 bits (493), Expect = 3e-48
 Identities = 93/152 (61%), Positives = 118/152 (77%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VT+ KRI+YAK+IL KE LPHVG GE  E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGTGEYCETKKAYYFGYII 269

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  A+GR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 270 HRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 329

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  +T GLK+ LATGNW     AG
Sbjct: 330 NLQFA-IKAKTVTSGLKYSLATGNWGQANAAG 360

[25][TOP]
>UniRef100_Q1L6D4 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Embothrium coccineum RepID=Q1L6D4_EMBCO
          Length = 706

 Score =  194 bits (493), Expect = 3e-48
 Identities = 96/152 (63%), Positives = 118/152 (77%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+ EDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDV 329

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360

[26][TOP]
>UniRef100_Q1L6C3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Homalocladium
           platycladum RepID=Q1L6C3_9CARY
          Length = 875

 Score =  194 bits (492), Expect = 3e-48
 Identities = 94/152 (61%), Positives = 118/152 (77%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG TV VT+ KRI+YA++IL KE LPHVGVGE  E +K ++FGY++
Sbjct: 210 VIQNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIV 269

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDQGKDV 329

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360

[27][TOP]
>UniRef100_Q1L5A7 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Spinacia oleracea RepID=Q1L5A7_SPIOL
          Length = 495

 Score =  194 bits (492), Expect = 3e-48
 Identities = 94/152 (61%), Positives = 119/152 (78%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG TV VTR KRI+YA++IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 274 VIQNQQVALDYIGKRGATVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYII 333

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  A+GR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D+GK++
Sbjct: 334 HRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDSGKDL 393

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 394 NLSFA-IKAKTITSGLKYSLATGNWGQANAAG 424

[28][TOP]
>UniRef100_B9H2V2 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
           RepID=B9H2V2_POPTR
          Length = 690

 Score =  194 bits (492), Expect = 3e-48
 Identities = 96/152 (63%), Positives = 117/152 (76%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG TV VTR KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 314 VIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 373

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+ EDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 374 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDV 433

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 434 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 464

[29][TOP]
>UniRef100_Q1L6E1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cissus tuberosa
           RepID=Q1L6E1_9MAGN
          Length = 951

 Score =  193 bits (491), Expect = 4e-48
 Identities = 94/152 (61%), Positives = 117/152 (76%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+I  KE LPHVGVGE  E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEIFQKEMLPHVGVGEYCETKKAYYFGYII 269

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           H+LL  A GR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 270 HQLLLCAFGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 329

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360

[30][TOP]
>UniRef100_Q1L5Y8 DNA-directed RNA polymerase n=1 Tax=Antirrhinum majus
           RepID=Q1L5Y8_ANTMA
          Length = 1200

 Score =  193 bits (491), Expect = 4e-48
 Identities = 95/152 (62%), Positives = 118/152 (77%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VT+ KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 323 VIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 382

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+ EDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 383 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDV 442

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 443 NLQ-FXIKAKTITSGLKYSLATGNWGQANAAG 473

[31][TOP]
>UniRef100_Q1L5B4 DNA-directed RNA polymerase n=1 Tax=Rhododendron macrophyllum
           RepID=Q1L5B4_RHOMC
          Length = 1207

 Score =  193 bits (490), Expect = 6e-48
 Identities = 93/154 (60%), Positives = 118/154 (76%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VT+ KRI+YAK+IL +E LPHVG GE  E +K ++FGY+I
Sbjct: 332 VIQNQQVALDYIGKRGSTVGVTKEKRIRYAKEILQREMLPHVGTGEYCETKKAYYFGYII 391

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+PEDDRDHY NKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 392 HRLLLCALGRRPEDDRDHYANKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDV 451

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAGGK 462
           +L    IK+  IT GLK+ LATGNW     AG +
Sbjct: 452 NLQFA-IKAKTITSGLKYSLATGNWGQANSAGSR 484

[32][TOP]
>UniRef100_Q42877 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Solanum
           lycopersicum RepID=RPB2_SOLLC
          Length = 1191

 Score =  193 bits (490), Expect = 6e-48
 Identities = 96/152 (63%), Positives = 117/152 (76%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG TV VTR KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 314 VIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 373

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+ EDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 374 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDV 433

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 434 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 464

[33][TOP]
>UniRef100_Q1L5Y9 DNA-directed RNA polymerase n=1 Tax=Petunia x hybrida
           RepID=Q1L5Y9_PETHY
          Length = 1195

 Score =  192 bits (489), Expect = 7e-48
 Identities = 95/152 (62%), Positives = 117/152 (76%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG TV VT+ KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 318 VIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 377

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+ EDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 378 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDV 437

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 438 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 468

[34][TOP]
>UniRef100_B9RZ91 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
           RepID=B9RZ91_RICCO
          Length = 1194

 Score =  192 bits (489), Expect = 7e-48
 Identities = 95/152 (62%), Positives = 117/152 (76%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG TV VT+ KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 317 VIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 376

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+ EDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 377 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDV 436

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 437 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 467

[35][TOP]
>UniRef100_Q1L5B5 DNA-directed RNA polymerase n=1 Tax=Rhododendron macrophyllum
           RepID=Q1L5B5_RHOMC
          Length = 1191

 Score =  192 bits (487), Expect = 1e-47
 Identities = 95/152 (62%), Positives = 117/152 (76%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG TV VT+ KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 314 VIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 373

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+ EDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 374 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDV 433

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 434 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 464

[36][TOP]
>UniRef100_Q1L5B3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Astilbe sp.
           Yoshikawa s.n. RepID=Q1L5B3_9MAGN
          Length = 951

 Score =  191 bits (486), Expect = 2e-47
 Identities = 94/152 (61%), Positives = 118/152 (77%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VTR KRI+YA++IL KE LPHVG+ E  E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGMAEYCETKKAYYFGYII 269

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL VALGR+ EDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 270 HRLLLVALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDV 329

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360

[37][TOP]
>UniRef100_Q1L5Z0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nicotiana sylvestris
           RepID=Q1L5Z0_NICSY
          Length = 1087

 Score =  191 bits (485), Expect = 2e-47
 Identities = 94/152 (61%), Positives = 116/152 (76%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG TV VTR KRI+YAK+IL KE LPHVG+GE  E +K ++FGY+I
Sbjct: 217 VIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGIGEYCETKKAYYFGYII 276

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+ EDDRDHYGNKR+DLAGPLL   FR  FR++T++ +  +Q+ +D GK+V
Sbjct: 277 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGXFRMLFRKLTRDVRAYVQKXVDNGKDV 336

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 337 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 367

[38][TOP]
>UniRef100_Q1L6E5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Callistemon
           subulatus RepID=Q1L6E5_9MYRT
          Length = 952

 Score =  191 bits (484), Expect = 3e-47
 Identities = 95/152 (62%), Positives = 116/152 (76%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG TV VTR KRI+YAK+IL KE LPHVGV E  E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVEEYCETKKAYYFGYII 269

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+ EDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 329

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360

[39][TOP]
>UniRef100_C1E1U0 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
           RepID=C1E1U0_9CHLO
          Length = 1178

 Score =  191 bits (484), Expect = 3e-47
 Identities = 90/147 (61%), Positives = 118/147 (80%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQSQDVALD+IGKRG+ V VTR KRIQYA++IL KE LPHVGV E  E +K +F GY++
Sbjct: 314 VIQSQDVALDFIGKRGSAVGVTRPKRIQYAREILQKELLPHVGVNEGCETKKAYFLGYIV 373

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           +RLL  ALGR+ EDDRDH+GNKR+DL+GPL+A+LFRQ FR++TK+ ++  QR +D+GK++
Sbjct: 374 NRLLLCALGRKKEDDRDHFGNKRMDLSGPLIAMLFRQLFRKVTKDVRLYSQRCIDSGKDI 433

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSS 441
            L    +K+  IT GLK+ LATGNW +
Sbjct: 434 QLTLA-VKAKTITSGLKYSLATGNWGA 459

[40][TOP]
>UniRef100_Q1L5B7 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Camellia japonica RepID=Q1L5B7_9ERIC
          Length = 417

 Score =  190 bits (483), Expect = 4e-47
 Identities = 94/152 (61%), Positives = 117/152 (76%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG +V VT+ KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGASVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+ EDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDV 329

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360

[41][TOP]
>UniRef100_Q1L5B6 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Camellia japonica RepID=Q1L5B6_9ERIC
          Length = 431

 Score =  190 bits (483), Expect = 4e-47
 Identities = 93/152 (61%), Positives = 116/152 (76%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL +E LPHVG GE  E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTRDKRIRYAKEILQREMLPHVGTGEYCETKKAYYFGYII 269

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL   LGR+PEDDRDHY NKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 270 HRLLLCVLGRRPEDDRDHYANKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDV 329

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 330 NLQFA-IKAKSITSGLKYSLATGNWGQANAAG 360

[42][TOP]
>UniRef100_Q1L5A9 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Liquidambar acalycina RepID=Q1L5A9_9MAGN
          Length = 453

 Score =  189 bits (481), Expect = 6e-47
 Identities = 94/152 (61%), Positives = 116/152 (76%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG TV VT+ KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+ EDDR HYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRAEDDRAHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 329

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360

[43][TOP]
>UniRef100_C1ML14 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1ML14_9CHLO
          Length = 1172

 Score =  189 bits (480), Expect = 8e-47
 Identities = 90/146 (61%), Positives = 116/146 (79%)
 Frame = +1

Query: 4   IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
           IQS+ VALDYIGKRG+ V V+R KRI+YA+DIL KE LPHVGV E  E RK ++ GY++H
Sbjct: 308 IQSKKVALDYIGKRGSAVGVSREKRIKYAQDILQKELLPHVGVDEECETRKAYYLGYIVH 367

Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
           RLL  ALGR+ EDDRDH+GNKR+DLAGPL+A+LFRQ FR++TK+ ++  QR +D+GKE+ 
Sbjct: 368 RLLLCALGRRNEDDRDHFGNKRMDLAGPLIAILFRQLFRKLTKDVRLYCQRCVDSGKEIQ 427

Query: 364 LHGGHIKSDVITKGLKFPLATGNWSS 441
           L    +K+  IT GLK+ LATGNW +
Sbjct: 428 LTLA-VKAKTITSGLKYSLATGNWGA 452

[44][TOP]
>UniRef100_Q1L5Z4 DNA-directed RNA polymerase n=1 Tax=Nicotiana sylvestris
           RepID=Q1L5Z4_NICSY
          Length = 1203

 Score =  188 bits (477), Expect = 2e-46
 Identities = 90/152 (59%), Positives = 116/152 (76%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV  TR +RI+YAK+IL +E LPHVG  E  E +K ++FGY+I
Sbjct: 328 VIQNQQVALDYIGKRGSTVGFTRERRIKYAKEILQREMLPHVGTREYCETKKAYYFGYII 387

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL   LGR+PEDDRDHYG+KR+DLAGPLL  LFR  FR++T++ +  +Q+ +D+GK+V
Sbjct: 388 HRLLLCVLGRRPEDDRDHYGBKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDSGKDV 447

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 448 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 478

[45][TOP]
>UniRef100_A9SJE5 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
           patens RepID=A9SJE5_PHYPA
          Length = 1185

 Score =  188 bits (477), Expect = 2e-46
 Identities = 95/152 (62%), Positives = 116/152 (76%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE  E +K +FFGY+I
Sbjct: 309 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYFFGYII 368

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  A+G   EDDRDHYGNKR+DLAGPLL  LFR  FR++TK+ +  +Q+ +D GKE+
Sbjct: 369 HRLLLCAIG-GAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTKDVRGYLQKCVDNGKEI 427

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    +K+  IT GLK+ LATGNW     AG
Sbjct: 428 NL-AYAVKAKTITSGLKYSLATGNWGQANTAG 458

[46][TOP]
>UniRef100_Q1L5Z2 DNA-directed RNA polymerase n=1 Tax=Petunia x hybrida
           RepID=Q1L5Z2_PETHY
          Length = 1203

 Score =  187 bits (475), Expect = 3e-46
 Identities = 90/152 (59%), Positives = 116/152 (76%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV  +R +RI+YAK+IL +E LPHVG  E  E +K ++FGY+I
Sbjct: 328 VIQNQQVALDYIGKRGSTVGFSRERRIKYAKEILQREMLPHVGTREYCETKKAYYFGYII 387

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL   LGR+PEDDRDHYGNKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D+GK+V
Sbjct: 388 HRLLLCVLGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDSGKDV 447

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 448 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 478

[47][TOP]
>UniRef100_Q1L5Z1 DNA-directed RNA polymerase n=1 Tax=Solanum lycopersicum
           RepID=Q1L5Z1_SOLLC
          Length = 1205

 Score =  187 bits (475), Expect = 3e-46
 Identities = 91/152 (59%), Positives = 114/152 (75%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+TV  TR KRI+YAK+IL +E LPHVG  E  E +K ++FGY+I
Sbjct: 333 VIQNQQVALDYIGKRGSTVGFTREKRIKYAKEILQREMLPHVGTREYCETKKAYYFGYII 392

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL   LGR+PEDDRDHY NKR+DLAGPLL  LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 393 HRLLLCVLGRRPEDDRDHYANKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDGGKDV 452

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW     AG
Sbjct: 453 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 483

[48][TOP]
>UniRef100_Q1L5Z3 DNA-directed RNA polymerase n=1 Tax=Antirrhinum majus
           RepID=Q1L5Z3_ANTMA
          Length = 1198

 Score =  186 bits (472), Expect = 7e-46
 Identities = 90/152 (59%), Positives = 117/152 (76%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG+T+ VTR KRI+YA++IL +E LPHVG  E  E +K ++FGY+I
Sbjct: 323 VIQNQQVALDYIGKRGSTIGVTRDKRIKYAREILQREMLPHVGTEEYCETKKAYYFGYII 382

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           +RLL  ALGR+PEDDRDHY NKR+DLAGPLLA LFR  FR++T++ +  +Q+ +D GK+V
Sbjct: 383 NRLLLCALGRRPEDDRDHYANKRLDLAGPLLAGLFRMLFRKLTRDVRSYVQKCVDNGKDV 442

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ +ATGNW     AG
Sbjct: 443 NLQFA-IKAKTITSGLKYSIATGNWGQANAAG 473

[49][TOP]
>UniRef100_A1YIC9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Furculomyces
           boomerangus RepID=A1YIC9_9FUNG
          Length = 906

 Score =  180 bits (457), Expect = 4e-44
 Identities = 88/151 (58%), Positives = 113/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ +DVALD+IGKRG  V V++ KRI+Y  +IL KEFLPHVG    NE RK FFFGY++
Sbjct: 117 VIQDKDVALDFIGKRGTAVGVSKDKRIKYGAEILQKEFLPHVGTQAHNETRKSFFFGYMV 176

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+ +DDRDHYG KR+DLAGPLLA+LFR  FR++TK+    +Q+ +D+ +E 
Sbjct: 177 HRLLLCALERREQDDRDHYGKKRMDLAGPLLAMLFRNLFRKVTKDMTRYLQKCIDSKREF 236

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IKS+ IT GLK+ LATGNW   +K+
Sbjct: 237 NLTMA-IKSNTITAGLKYSLATGNWGDQKKS 266

[50][TOP]
>UniRef100_Q1L5X1 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
           RepID=Q1L5X1_CHLRE
          Length = 1607

 Score =  179 bits (454), Expect = 8e-44
 Identities = 85/151 (56%), Positives = 112/151 (74%)
 Frame = +1

Query: 4   IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
           +Q+Q+ AL+Y+GKRG     ++A RIQYA+++L KE LPH+G  E  E RKG+F GY++H
Sbjct: 305 VQTQEEALNYLGKRGTVTGASKADRIQYARNLLIKELLPHLGTEEFMETRKGYFVGYMVH 364

Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
           RL+ VALGR+PEDDRDHY NKR+DL GPL+A LFR  FR++ KE +M  QR +DAGKE++
Sbjct: 365 RLMLVALGRRPEDDRDHYANKRLDLGGPLMAGLFRLLFRKLCKELRMQAQRMVDAGKEIN 424

Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +    I   VIT+GLK+ LATGNW    K G
Sbjct: 425 VISA-INDKVITRGLKYSLATGNWGEQGKQG 454

[51][TOP]
>UniRef100_A1YIC8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Capniomyces
           stellatus RepID=A1YIC8_9FUNG
          Length = 924

 Score =  179 bits (454), Expect = 8e-44
 Identities = 86/151 (56%), Positives = 115/151 (76%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++V+LD+IGKRG TV V++ KR++YA++IL KEFLPHVG    NE RK +FFGY+I
Sbjct: 124 VIQDKEVSLDFIGKRGTTVGVSKEKRVKYAREILQKEFLPHVGTQAHNETRKTYFFGYMI 183

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL   L R+ +DDRDHYG KR+DLAGPLLA+LFR  FR++TK+    +Q+ +D+ +E 
Sbjct: 184 HRLLLCGLERREQDDRDHYGKKRMDLAGPLLAMLFRNLFRKVTKDMTRYLQKCIDSKREF 243

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +KS+ IT GLK+ LATGNW   +KA
Sbjct: 244 NLTMA-MKSNTITAGLKYSLATGNWGDQKKA 273

[52][TOP]
>UniRef100_C5WR62 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
           RepID=C5WR62_SORBI
          Length = 1218

 Score =  178 bits (451), Expect = 2e-43
 Identities = 94/152 (61%), Positives = 108/152 (71%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ+Q VALDYIGKRG TV VTR KRI+YAK+IL KE LPHVGVGE  E +K ++FGY+I
Sbjct: 359 VIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYII 418

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+ EDDRDHYGNKR+DLAGPLL  LFR C               +D GKEV
Sbjct: 419 HRLLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMC---------------VDNGKEV 463

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    IK+  IT GLK+ LATGNW    +AG
Sbjct: 464 NLQFA-IKAKTITSGLKYSLATGNWGQANQAG 494

[53][TOP]
>UniRef100_A1YIC7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Smittium culisetae
           RepID=A1YIC7_SMICU
          Length = 899

 Score =  177 bits (449), Expect = 3e-43
 Identities = 84/151 (55%), Positives = 114/151 (75%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++V+LD+IGKRG TV V R KRI+YA++IL KEFLPHVG    NE RK +F GY++
Sbjct: 102 VIQDREVSLDFIGKRGTTVGVNREKRIKYAREILQKEFLPHVGTQPHNETRKTYFLGYMV 161

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL+  L R+ +DDRDHYG KR+DLAGPLLA+LFR  F++MT++    +Q+ +++ +E 
Sbjct: 162 HRLLQCVLERRDQDDRDHYGRKRLDLAGPLLAMLFRNLFKKMTRDMTRYLQKCIESRREF 221

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +KS+ IT GLK+ LATGNW   +KA
Sbjct: 222 NLSMA-LKSNTITAGLKYSLATGNWGDQKKA 251

[54][TOP]
>UniRef100_A1YID1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum
           RepID=A1YID1_9FUNG
          Length = 883

 Score =  177 bits (448), Expect = 4e-43
 Identities = 86/151 (56%), Positives = 110/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q VALDYIGKRG TV + + KRI+YA +IL KEFLPHV      E +K +FFGY++
Sbjct: 115 VIQEQHVALDYIGKRGTTVGINKDKRIKYATEILQKEFLPHVATEAHTETKKAYFFGYMV 174

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDHYG KR+DLAGPLLA+LFR  FR++TK+    +Q+ +D+ +E 
Sbjct: 175 HRLLLAALERRDLDDRDHYGKKRMDLAGPLLAMLFRMLFRKLTKDVGRYLQKCIDSNREF 234

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +KS+ IT GLK+ LATGNW   +KA
Sbjct: 235 NLTLA-VKSNTITNGLKYSLATGNWGDQKKA 264

[55][TOP]
>UniRef100_Q9UV80 DNA-directed RNA polymerase (Fragment) n=1 Tax=Sclerotinia
           sclerotiorum RepID=Q9UV80_SCLSC
          Length = 938

 Score =  176 bits (447), Expect = 5e-43
 Identities = 85/151 (56%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IGKRGN  ++TR KRI+YA+DI+ KE LPH+   E +E RK FF GY++
Sbjct: 120 VIQDREVALDFIGKRGNGTSLTRDKRIKYARDIMQKELLPHISQKEGSETRKAFFLGYMV 179

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           H+LL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  FRR+T +    +QR ++  +E 
Sbjct: 180 HKLLQCALGRRETDDRDHFGKKRLDLAGPLLAKLFRNLFRRLTTDVYRYLQRCVENNREF 239

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L  G +KS  IT GLK+ LATGNW   +KA
Sbjct: 240 NLTLG-VKSTTITNGLKYSLATGNWGDQKKA 269

[56][TOP]
>UniRef100_A7E6G0 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980
           UF-70 RepID=A7E6G0_SCLS1
          Length = 1267

 Score =  176 bits (447), Expect = 5e-43
 Identities = 85/151 (56%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IGKRGN  ++TR KRI+YA+DI+ KE LPH+   E +E RK FF GY++
Sbjct: 346 VIQDREVALDFIGKRGNGTSLTRDKRIKYARDIMQKELLPHISQKEGSETRKAFFLGYMV 405

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           H+LL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  FRR+T +    +QR ++  +E 
Sbjct: 406 HKLLQCALGRRETDDRDHFGKKRLDLAGPLLAKLFRNLFRRLTTDVYRYLQRCVENNREF 465

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L  G +KS  IT GLK+ LATGNW   +KA
Sbjct: 466 NLTLG-VKSTTITNGLKYSLATGNWGDQKKA 495

[57][TOP]
>UniRef100_A6S7C1 DNA-directed RNA polymerase n=2 Tax=Botryotinia fuckeliana
           RepID=A6S7C1_BOTFB
          Length = 1207

 Score =  176 bits (447), Expect = 5e-43
 Identities = 85/151 (56%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IGKRGN  ++TR KRI+YA+DI+ KE LPH+   E +E RK FF GY++
Sbjct: 346 VIQDREVALDFIGKRGNGTSLTRDKRIKYARDIMQKELLPHISQKEGSETRKAFFLGYMV 405

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           H+LL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  FRR+T +    +QR ++  +E 
Sbjct: 406 HKLLQCALGRRETDDRDHFGKKRLDLAGPLLAKLFRNLFRRLTTDVYRYLQRCVENNREF 465

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L  G +KS  IT GLK+ LATGNW   +KA
Sbjct: 466 NLTLG-VKSTTITNGLKYSLATGNWGDQKKA 495

[58][TOP]
>UniRef100_Q54J75 DNA-directed RNA polymerase II subunit rpb2 n=1 Tax=Dictyostelium
           discoideum RepID=RPB2_DICDI
          Length = 1170

 Score =  176 bits (447), Expect = 5e-43
 Identities = 85/154 (55%), Positives = 114/154 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQSQ+VALDY+GKRG+T+  TR +RI++A+++L KE LPHV V E  E +K F+FGY+ 
Sbjct: 309 VIQSQEVALDYLGKRGSTMG-TREQRIKFAREVLQKEMLPHVSVAEFYETKKAFYFGYIT 367

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  +L R+P DDRDH+ NKR+DLAGPLL  LFRQ F+++TK+ ++ +QR +D  KE 
Sbjct: 368 HRLLLASLERRPLDDRDHFANKRLDLAGPLLGTLFRQLFKKLTKDVRLYLQRCIDKDKEF 427

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAGGK 462
            +    +KS  IT GLK+ LATGNW S +  G K
Sbjct: 428 -IASSAVKSKTITSGLKYSLATGNWGSSKSGGTK 460

[59][TOP]
>UniRef100_Q6RYG4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Thamnolia
           vermicularis RepID=Q6RYG4_9LECA
          Length = 893

 Score =  176 bits (446), Expect = 7e-43
 Identities = 82/151 (54%), Positives = 114/151 (75%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IGKRGN+  +TR KRI+YA+DI+ KE LPH+   E +E RK FF GY++
Sbjct: 110 VIQDREVALDFIGKRGNSQGITRDKRIKYARDIMQKELLPHISQVEGSETRKAFFLGYMV 169

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HR+L+VALGR+  DDRDH+G KR+DLAGPL+A LFR  F ++TK+    +Q+ +++ +E 
Sbjct: 170 HRMLQVALGRRDPDDRDHFGKKRLDLAGPLMAGLFRMLFNKLTKDVYKYLQKCVESNREF 229

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L  G +KS  +T GLK+ LATGNW   +KA
Sbjct: 230 NLTLG-VKSTTLTNGLKYSLATGNWGDQKKA 259

[60][TOP]
>UniRef100_A7XIF0 DNA-directed RNA polymerase n=1 Tax=Psilopezia deligata
           RepID=A7XIF0_9PEZI
          Length = 801

 Score =  176 bits (446), Expect = 7e-43
 Identities = 84/151 (55%), Positives = 114/151 (75%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ +++ALDYIGKRGN+    + KRI+YA+DIL KE LPH+   E NE RK FF GY++
Sbjct: 90  VIQDREIALDYIGKRGNSQGSNKEKRIRYARDILQKELLPHISQQEGNETRKAFFLGYMV 149

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL+ AL R+  DDRDH+G KR+DLAGPLLA LFR  ++++TKE    +++ ++ GKE 
Sbjct: 150 HRLLQCALERREVDDRDHFGKKRLDLAGPLLAQLFRTLWKQLTKEVYKYLEKCVEGGKEF 209

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L+   +KS+ IT GLK+ LATGNW+S +KA
Sbjct: 210 NLNLA-VKSNTITSGLKYSLATGNWASQKKA 239

[61][TOP]
>UniRef100_Q6RYG6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Sphaerophorus
           globosus RepID=Q6RYG6_9LECA
          Length = 903

 Score =  175 bits (444), Expect = 1e-42
 Identities = 85/151 (56%), Positives = 110/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IGKRGN+  VTR KRI+YA+DI+ KE LPH+   E  E RK FF GY++
Sbjct: 119 VIQDREVALDFIGKRGNSQGVTRDKRIKYARDIMQKELLPHISQSEGTETRKAFFLGYMV 178

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F ++TK+    +QR ++  KE 
Sbjct: 179 HRLLQCALGRREVDDRDHFGKKRLDLAGPLLAGLFRMLFNKLTKDVYKYLQRCVENNKEF 238

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +KS  +T GLK+ LATGNW   +KA
Sbjct: 239 NLTLA-VKSTTLTNGLKYSLATGNWGDQKKA 268

[62][TOP]
>UniRef100_C4Q1D7 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
           RepID=C4Q1D7_SCHMA
          Length = 1304

 Score =  175 bits (443), Expect = 2e-42
 Identities = 88/151 (58%), Positives = 110/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q VAL++IG RG    VT+ KRI+YAK+IL KE LPHVGV +  E RK +F GY++
Sbjct: 436 VIQEQKVALNFIGSRGARPGVTKEKRIKYAKEILQKETLPHVGVSDFCETRKAYFLGYMV 495

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDHYGNKR+DLAGPLLA LFR  FR +TKE ++  Q+ +D GK+ 
Sbjct: 496 HRLLLAALKRRDVDDRDHYGNKRLDLAGPLLAFLFRGLFRNLTKEIRLYAQKFIDKGKDF 555

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    I+S +IT GLK+ LATGNW   +KA
Sbjct: 556 NLELA-IRSQIITDGLKYSLATGNWGDQKKA 585

[63][TOP]
>UniRef100_UPI0001865901 hypothetical protein BRAFLDRAFT_125505 n=1 Tax=Branchiostoma
           floridae RepID=UPI0001865901
          Length = 1176

 Score =  174 bits (441), Expect = 3e-42
 Identities = 85/151 (56%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YA++IL KE LPHVG+ +  E +K +F GY++
Sbjct: 312 VIQEQNVALNFIGARGAKPGVTKDKRIKYAREILQKEMLPHVGISDYCETKKAYFLGYIV 371

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ +TKE ++  Q+ +D GK+ 
Sbjct: 372 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAYLFRGLFKNLTKEVRIYAQKFIDRGKDF 431

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +IT GLK+ LATGNW   +KA
Sbjct: 432 NLELA-IKTRIITDGLKYSLATGNWGDQKKA 461

[64][TOP]
>UniRef100_UPI000180B7B7 PREDICTED: similar to POLR2B protein n=1 Tax=Ciona intestinalis
           RepID=UPI000180B7B7
          Length = 1173

 Score =  174 bits (441), Expect = 3e-42
 Identities = 85/151 (56%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YA++IL KE LPHVG+ +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAREILQKEMLPHVGISDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  FR + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLSAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEVRLYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +IT GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIITDGLKYSLATGNWGDQKKA 459

[65][TOP]
>UniRef100_Q27670 DNA-directed RNA polymerase (Fragment) n=1 Tax=Helobdella stagnalis
           RepID=Q27670_9ANNE
          Length = 859

 Score =  174 bits (441), Expect = 3e-42
 Identities = 86/150 (57%), Positives = 110/150 (73%)
 Frame = +1

Query: 4   IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
           +Q Q VAL++IG RG+   VTR KRI+YAK+IL KE LPHVG+ +  E RK +F GY++H
Sbjct: 118 VQDQPVALNFIGGRGSRPGVTREKRIKYAKEILQKEMLPHVGISDFCETRKAYFLGYMVH 177

Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
           RLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  FR ++KE ++  Q+ +D GK+ +
Sbjct: 178 RLLLAALGRREVDDRDHYGNKRLDLAGPLLAYLFRGLFRNLSKEIRLYAQKFIDRGKDFN 237

Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           L    IK+  IT GLK+ LATGNW   +KA
Sbjct: 238 LELA-IKTRTITDGLKYSLATGNWGDQKKA 266

[66][TOP]
>UniRef100_C3Y5U9 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
           RepID=C3Y5U9_BRAFL
          Length = 1104

 Score =  174 bits (441), Expect = 3e-42
 Identities = 85/151 (56%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YA++IL KE LPHVG+ +  E +K +F GY++
Sbjct: 312 VIQEQNVALNFIGARGAKPGVTKDKRIKYAREILQKEMLPHVGISDYCETKKAYFLGYIV 371

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ +TKE ++  Q+ +D GK+ 
Sbjct: 372 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAYLFRGLFKNLTKEVRIYAQKFIDRGKDF 431

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +IT GLK+ LATGNW   +KA
Sbjct: 432 NLELA-IKTRIITDGLKYSLATGNWGDQKKA 461

[67][TOP]
>UniRef100_Q27548 DNA-directed RNA polymerase (Fragment) n=1 Tax=Crassostrea gigas
           RepID=Q27548_CRAGI
          Length = 859

 Score =  174 bits (440), Expect = 4e-42
 Identities = 85/151 (56%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YA++IL KE LPHVGV +  E +K +F GY++
Sbjct: 117 VIQEQNVALNFIGSRGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCETKKAYFLGYMV 176

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  A+GR+  DDRDHYGNKR+DLAGPLLA LFR  FR + KE ++  Q+ +D GK+ 
Sbjct: 177 HRLLLAAIGRREVDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEVRLYAQKFIDRGKDF 236

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +IT GLK+ LATGNW   +KA
Sbjct: 237 NLELA-IKTRIITDGLKYSLATGNWGDQKKA 266

[68][TOP]
>UniRef100_Q7QAK7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
           RepID=Q7QAK7_ANOGA
          Length = 1175

 Score =  173 bits (439), Expect = 5e-42
 Identities = 85/151 (56%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           V+Q Q+VAL++IG RG    VT+ KRI+YAK+IL KE LPHVGV +  E +K +F GY++
Sbjct: 310 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE +M  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +IT GL++ LATGNW   +KA
Sbjct: 430 NLELA-IKTKIITDGLRYSLATGNWGDQKKA 459

[69][TOP]
>UniRef100_B0WKE9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
           RepID=B0WKE9_CULQU
          Length = 1176

 Score =  173 bits (439), Expect = 5e-42
 Identities = 85/151 (56%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           V+Q Q+VAL++IG RG    VT+ KRI+YAK+IL KE LPHVGV +  E +K +F GY++
Sbjct: 311 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 370

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE +M  Q+ +D GK+ 
Sbjct: 371 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLLKEVRMYAQKFIDRGKDF 430

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +IT GL++ LATGNW   +KA
Sbjct: 431 NLELA-IKTKIITDGLRYSLATGNWGDQKKA 460

[70][TOP]
>UniRef100_Q2I5S5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phycomyces
           blakesleeanus RepID=Q2I5S5_PHYBL
          Length = 801

 Score =  173 bits (439), Expect = 5e-42
 Identities = 85/151 (56%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ QDVALD+IGKRG TV  TR +R +YA +IL KE LPHVG     E RK +FFGY+I
Sbjct: 119 VIQDQDVALDFIGKRGTTVGATRERRTKYATEILQKELLPHVGTAYKTETRKSYFFGYMI 178

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDHYG KR+DLAGPL+A LFR  F+++TK+    +Q+ +++ +E 
Sbjct: 179 HRLLLAALERRELDDRDHYGKKRMDLAGPLMAGLFRLLFKKLTKDVAKYLQKCIESSREF 238

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +KS+ IT GLK+ LATGNW   +KA
Sbjct: 239 NLTLA-VKSNTITNGLKYSLATGNWGDQKKA 268

[71][TOP]
>UniRef100_UPI000186D6F3 DNA-directed RNA polymerase II 135 kDa polypeptide, putative n=1
           Tax=Pediculus humanus corporis RepID=UPI000186D6F3
          Length = 1175

 Score =  173 bits (438), Expect = 6e-42
 Identities = 85/151 (56%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ +RI+YAK+IL KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGARGARPGVTKERRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE +M  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMFAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +IT GL++ LATGNW   +KA
Sbjct: 430 NLELA-IKTKIITDGLRYSLATGNWGDQKKA 459

[72][TOP]
>UniRef100_B4R0H5 DNA-directed RNA polymerase n=1 Tax=Drosophila simulans
           RepID=B4R0H5_DROSI
          Length = 1176

 Score =  173 bits (438), Expect = 6e-42
 Identities = 84/151 (55%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           V+Q Q+VAL++IG RG    VT+ KRI+YAK+IL KE LPHVGV +  E +K +F GY++
Sbjct: 311 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 370

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  +LGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE +M  Q+ +D GK+ 
Sbjct: 371 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDF 430

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+++IT GL++ LATGNW   +KA
Sbjct: 431 NLELA-IKTNIITDGLRYSLATGNWGDQKKA 460

[73][TOP]
>UniRef100_B4PTC0 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
           RepID=B4PTC0_DROYA
          Length = 1176

 Score =  173 bits (438), Expect = 6e-42
 Identities = 84/151 (55%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           V+Q Q+VAL++IG RG    VT+ KRI+YAK+IL KE LPHVGV +  E +K +F GY++
Sbjct: 311 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 370

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  +LGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE +M  Q+ +D GK+ 
Sbjct: 371 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDF 430

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+++IT GL++ LATGNW   +KA
Sbjct: 431 NLELA-IKTNIITDGLRYSLATGNWGDQKKA 460

[74][TOP]
>UniRef100_B4N9I3 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
           RepID=B4N9I3_DROWI
          Length = 1176

 Score =  173 bits (438), Expect = 6e-42
 Identities = 84/151 (55%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           V+Q Q+VAL++IG RG    VT+ KRI+YAK+IL KE LPHVGV +  E +K +F GY++
Sbjct: 311 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 370

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  +LGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE +M  Q+ +D GK+ 
Sbjct: 371 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDF 430

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+++IT GL++ LATGNW   +KA
Sbjct: 431 NLELA-IKTNIITDGLRYSLATGNWGDQKKA 460

[75][TOP]
>UniRef100_B4M040 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
           RepID=B4M040_DROVI
          Length = 1176

 Score =  173 bits (438), Expect = 6e-42
 Identities = 84/151 (55%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           V+Q Q+VAL++IG RG    VT+ KRI+YAK+IL KE LPHVGV +  E +K +F GY++
Sbjct: 311 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 370

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  +LGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE +M  Q+ +D GK+ 
Sbjct: 371 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDF 430

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+++IT GL++ LATGNW   +KA
Sbjct: 431 NLELA-IKTNIITDGLRYSLATGNWGDQKKA 460

[76][TOP]
>UniRef100_B4KDW5 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
           RepID=B4KDW5_DROMO
          Length = 1176

 Score =  173 bits (438), Expect = 6e-42
 Identities = 84/151 (55%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           V+Q Q+VAL++IG RG    VT+ KRI+YAK+IL KE LPHVGV +  E +K +F GY++
Sbjct: 311 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 370

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  +LGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE +M  Q+ +D GK+ 
Sbjct: 371 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDF 430

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+++IT GL++ LATGNW   +KA
Sbjct: 431 NLELA-IKTNIITDGLRYSLATGNWGDQKKA 460

[77][TOP]
>UniRef100_B4K015 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
           RepID=B4K015_DROGR
          Length = 1175

 Score =  173 bits (438), Expect = 6e-42
 Identities = 84/151 (55%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           V+Q Q+VAL++IG RG    VT+ KRI+YAK+IL KE LPHVGV +  E +K +F GY++
Sbjct: 310 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  +LGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE +M  Q+ +D GK+ 
Sbjct: 370 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+++IT GL++ LATGNW   +KA
Sbjct: 430 NLELA-IKTNIITDGLRYSLATGNWGDQKKA 459

[78][TOP]
>UniRef100_Q298X6 DNA-directed RNA polymerase n=2 Tax=pseudoobscura subgroup
           RepID=Q298X6_DROPS
          Length = 1176

 Score =  173 bits (438), Expect = 6e-42
 Identities = 84/151 (55%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           V+Q Q+VAL++IG RG    VT+ KRI+YAK+IL KE LPHVGV +  E +K +F GY++
Sbjct: 311 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 370

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  +LGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE +M  Q+ +D GK+ 
Sbjct: 371 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDF 430

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+++IT GL++ LATGNW   +KA
Sbjct: 431 NLELA-IKTNIITDGLRYSLATGNWGDQKKA 460

[79][TOP]
>UniRef100_B3P0M0 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
           RepID=B3P0M0_DROER
          Length = 1176

 Score =  173 bits (438), Expect = 6e-42
 Identities = 84/151 (55%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           V+Q Q+VAL++IG RG    VT+ KRI+YAK+IL KE LPHVGV +  E +K +F GY++
Sbjct: 311 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 370

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  +LGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE +M  Q+ +D GK+ 
Sbjct: 371 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDF 430

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+++IT GL++ LATGNW   +KA
Sbjct: 431 NLELA-IKTNIITDGLRYSLATGNWGDQKKA 460

[80][TOP]
>UniRef100_B3LYR3 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
           RepID=B3LYR3_DROAN
          Length = 1176

 Score =  173 bits (438), Expect = 6e-42
 Identities = 84/151 (55%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           V+Q Q+VAL++IG RG    VT+ KRI+YAK+IL KE LPHVGV +  E +K +F GY++
Sbjct: 311 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 370

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  +LGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE +M  Q+ +D GK+ 
Sbjct: 371 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDF 430

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+++IT GL++ LATGNW   +KA
Sbjct: 431 NLELA-IKTNIITDGLRYSLATGNWGDQKKA 460

[81][TOP]
>UniRef100_Q6RYH6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dibaeis baeomyces
           RepID=Q6RYH6_9LECA
          Length = 893

 Score =  173 bits (438), Expect = 6e-42
 Identities = 80/151 (52%), Positives = 113/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IGKRGN+  +TR KRI+YA+DI+ KE LPH+   E +E RK FF GY++
Sbjct: 110 VIQDREVALDFIGKRGNSQGITRDKRIKYARDIMQKELLPHISQVEGSETRKAFFLGYMV 169

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HR+L+V LGR+  DDRDH+G KR+DLAGPL+A LFR  F ++TK+    +Q+ +++ +E 
Sbjct: 170 HRMLQVTLGRRDPDDRDHFGKKRLDLAGPLMAGLFRTLFNKLTKDVYKYLQKCVESNREF 229

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L  G +KS  +T GL++ LATGNW   +KA
Sbjct: 230 NLTLG-VKSTTLTNGLRYSLATGNWGEQKKA 259

[82][TOP]
>UniRef100_P08266 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=melanogaster
           subgroup RepID=RPB2_DROME
          Length = 1176

 Score =  173 bits (438), Expect = 6e-42
 Identities = 84/151 (55%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           V+Q Q+VAL++IG RG    VT+ KRI+YAK+IL KE LPHVGV +  E +K +F GY++
Sbjct: 311 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 370

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  +LGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE +M  Q+ +D GK+ 
Sbjct: 371 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDF 430

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+++IT GL++ LATGNW   +KA
Sbjct: 431 NLELA-IKTNIITDGLRYSLATGNWGDQKKA 460

[83][TOP]
>UniRef100_A7SHD8 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
           RepID=A7SHD8_NEMVE
          Length = 1182

 Score =  172 bits (437), Expect = 8e-42
 Identities = 85/151 (56%), Positives = 110/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ +RI+YAK+IL KE LPHVGV +  E +K +F GY++
Sbjct: 314 VIQEQNVALNFIGSRGARPGVTKERRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 373

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  FR + KE +M  Q+ +D GK+ 
Sbjct: 374 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEVRMYAQKFIDRGKDF 433

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           ++    +K  VIT GL++ LATGNW   +KA
Sbjct: 434 NIELA-LKPKVITDGLRYSLATGNWGDQKKA 463

[84][TOP]
>UniRef100_Q02061 DNA-directed RNA polymerase II subunit RPB2 n=1
           Tax=Schizosaccharomyces pombe RepID=RPB2_SCHPO
          Length = 1210

 Score =  172 bits (437), Expect = 8e-42
 Identities = 83/151 (54%), Positives = 110/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ +D+ALDYIGKRG+T  VTR KR++YA DIL KE LPH+   E  E RK FF GY+I
Sbjct: 309 VIQDKDIALDYIGKRGSTTGVTREKRLRYAHDILQKELLPHITTMEGFETRKAFFLGYMI 368

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HR+L  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR+MT++    MQ+ ++  +E 
Sbjct: 369 HRMLLCALERREPDDRDHFGKKRLDLAGPLLASLFRMLFRKMTRDVYKYMQKCVETNREF 428

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +KS++IT GL++ LATGNW   +++
Sbjct: 429 NLTLA-VKSNIITNGLRYSLATGNWGDQKRS 458

[85][TOP]
>UniRef100_Q9UV82 DNA-directed RNA polymerase (Fragment) n=1 Tax=Microglossum viride
           RepID=Q9UV82_9PEZI
          Length = 938

 Score =  172 bits (436), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALDYIGKRGN + +TR KRI+YA+DI+ KE LPH+   E +E RK FF GY++
Sbjct: 120 VIQDREVALDYIGKRGNAMGLTRDKRIKYARDIMQKELLPHISQKEGSETRKAFFLGYMV 179

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           H+LL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F+++T++     QR ++  KE 
Sbjct: 180 HKLLQCALGRRETDDRDHFGKKRLDLAGPLLAKLFRNLFKKLTQDLFKYTQRCVENRKEF 239

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +   G IKS  +T GLK+ LATGNW   +KA
Sbjct: 240 NPALG-IKSTTLTAGLKYSLATGNWGDQKKA 269

[86][TOP]
>UniRef100_Q9UV81 DNA-directed RNA polymerase (Fragment) n=1 Tax=Leotia viscosa
           RepID=Q9UV81_9HELO
          Length = 938

 Score =  172 bits (436), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALDYIGKRGN + +TR KRI+YA+DI+ KE LPH+   E +E RK FF GY++
Sbjct: 120 VIQDREVALDYIGKRGNAMGLTRDKRIKYARDIMQKELLPHISQKEGSETRKAFFLGYMV 179

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           H+LL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F+++T++     QR ++  KE 
Sbjct: 180 HKLLQCALGRRETDDRDHFGKKRLDLAGPLLAKLFRNLFKKLTQDLFKYTQRCVENRKEF 239

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +   G IKS  +T GLK+ LATGNW   +KA
Sbjct: 240 NPALG-IKSTTLTAGLKYSLATGNWGDQKKA 269

[87][TOP]
>UniRef100_UPI000194C2A3 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide B, 140kDa
           n=1 Tax=Taeniopygia guttata RepID=UPI000194C2A3
          Length = 1174

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459

[88][TOP]
>UniRef100_UPI0001795E58 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB2
           (RNA polymerase II subunit B2) (DNA-directed RNA
           polymerase II subunit B) (RNA polymerase II subunit 2)
           (DNA-directed RNA polymerase II 140 kDa polypeptide) n=1
           Tax=Equus caballus RepID=UPI0001795E58
          Length = 1174

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLQLA-IKTRIISDGLKYSLATGNWGDQKKA 459

[89][TOP]
>UniRef100_UPI000155BCC7 PREDICTED: similar to RNA polymerase II 140 kDa subunit, partial
           n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BCC7
          Length = 951

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459

[90][TOP]
>UniRef100_UPI0000F2D75F PREDICTED: similar to RNA polymerase II 140 kDa subunit n=1
           Tax=Monodelphis domestica RepID=UPI0000F2D75F
          Length = 1174

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459

[91][TOP]
>UniRef100_UPI0000E20419 PREDICTED: DNA directed RNA polymerase II polypeptide B isoform 1
           n=1 Tax=Pan troglodytes RepID=UPI0000E20419
          Length = 1099

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 235 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 294

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 295 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 354

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 355 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 384

[92][TOP]
>UniRef100_P30876 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=Catarrhini
           RepID=RPB2_HUMAN
          Length = 1174

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459

[93][TOP]
>UniRef100_UPI00005A2A5D PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           17 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5D
          Length = 1099

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 235 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 294

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 295 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 354

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 355 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 384

[94][TOP]
>UniRef100_UPI00005A2A5C PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           16 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5C
          Length = 1173

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459

[95][TOP]
>UniRef100_UPI00005A2A5B PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           15 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5B
          Length = 1179

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459

[96][TOP]
>UniRef100_UPI00005A2A5A PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           14 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5A
          Length = 1175

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459

[97][TOP]
>UniRef100_UPI00005A2A59 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           13 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A59
          Length = 1180

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459

[98][TOP]
>UniRef100_UPI00005A2A58 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           12 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A58
          Length = 1174

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 311 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 370

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 371 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 430

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 431 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 460

[99][TOP]
>UniRef100_UPI00005A2A57 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           11 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A57
          Length = 1180

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459

[100][TOP]
>UniRef100_UPI00005A2A56 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           10 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A56
          Length = 1166

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 305 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 364

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 365 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 424

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 425 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 454

[101][TOP]
>UniRef100_UPI00005A2A55 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           9 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A55
          Length = 1182

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 306 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 365

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 366 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 425

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 426 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 455

[102][TOP]
>UniRef100_UPI00005A2A54 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           8 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A54
          Length = 1173

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459

[103][TOP]
>UniRef100_UPI00005A2A52 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           6 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A52
          Length = 1162

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459

[104][TOP]
>UniRef100_UPI00005A2A51 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           5 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A51
          Length = 932

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459

[105][TOP]
>UniRef100_UPI00006A01AA DNA-directed RNA polymerase II subunit RPB2 (EC 2.7.7.6) (RNA
           polymerase II subunit B2) (DNA-directed RNA polymerase
           II subunit B) (RNA polymerase II subunit 2)
           (DNA-directed RNA polymerase II 140 kDa polypeptide).
           n=1 Tax=Xenopus (Silurana) tropicalis
           RepID=UPI00006A01AA
          Length = 927

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459

[106][TOP]
>UniRef100_UPI0000EB23D9 DNA-directed RNA polymerase II subunit RPB2 (EC 2.7.7.6) (RNA
           polymerase II subunit B2) (DNA-directed RNA polymerase
           II subunit B) (RNA polymerase II subunit 2)
           (DNA-directed RNA polymerase II 140 kDa polypeptide).
           n=1 Tax=Canis lupus familiaris RepID=UPI0000EB23D9
          Length = 1176

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459

[107][TOP]
>UniRef100_UPI0000F3357E UPI0000F3357E related cluster n=1 Tax=Bos taurus
           RepID=UPI0000F3357E
          Length = 1177

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 311 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 370

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 371 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 430

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 431 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 460

[108][TOP]
>UniRef100_UPI00003AD7E4 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1
           Tax=Gallus gallus RepID=UPI00003AD7E4
          Length = 1174

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459

[109][TOP]
>UniRef100_Q6PA46 MGC68569 protein n=1 Tax=Xenopus laevis RepID=Q6PA46_XENLA
          Length = 949

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459

[110][TOP]
>UniRef100_Q5ZMN9 DNA-directed RNA polymerase n=1 Tax=Gallus gallus
           RepID=Q5ZMN9_CHICK
          Length = 1174

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459

[111][TOP]
>UniRef100_A5PJW8 DNA-directed RNA polymerase n=1 Tax=Bos taurus RepID=A5PJW8_BOVIN
          Length = 1174

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459

[112][TOP]
>UniRef100_Q27446 DNA-directed RNA polymerase (Fragment) n=1 Tax=Artemia salina
           RepID=Q27446_ARTSA
          Length = 862

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YA++IL KE LPHVG+ +  E +K +F GY++
Sbjct: 117 VIQEQNVALNFIGARGARPGVTKDKRIKYAREILQKEMLPHVGISDFCETKKAYFLGYMV 176

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPL++LLFR  F+ +TKE +M  Q+ +D GK+ 
Sbjct: 177 HRLLLAALGRRELDDRDHYGNKRLDLAGPLMSLLFRGLFKTLTKEVRMYAQKFIDRGKDF 236

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           ++    IK   IT GLK+ LATGNW   +KA
Sbjct: 237 NIELA-IKPKFITDGLKYSLATGNWGDQKKA 266

[113][TOP]
>UniRef100_B4DR40 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DR40_HUMAN
          Length = 1083

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 219 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 278

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 279 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 338

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 339 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 368

[114][TOP]
>UniRef100_B4DHJ3 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DHJ3_HUMAN
          Length = 1167

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 303 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 362

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 363 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 422

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 423 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 452

[115][TOP]
>UniRef100_B4DH29 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DH29_HUMAN
          Length = 1099

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 235 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 294

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 295 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 354

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 355 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 384

[116][TOP]
>UniRef100_A8MW88 DNA-directed RNA polymerase (Fragment) n=1 Tax=Homo sapiens
           RepID=A8MW88_HUMAN
          Length = 1173

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 309 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 368

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 369 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 428

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 429 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 458

[117][TOP]
>UniRef100_Q8CFI7 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Mus musculus
           RepID=RPB2_MOUSE
          Length = 1174

 Score =  172 bits (435), Expect = 1e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459

[118][TOP]
>UniRef100_UPI0000D5712C PREDICTED: similar to AGAP003648-PA n=1 Tax=Tribolium castaneum
           RepID=UPI0000D5712C
          Length = 1175

 Score =  171 bits (434), Expect = 2e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q++AL++IG RG    VT+ KRI+YA++IL KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNIALNFIGTRGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE +M  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +IT GL++ LATGNW   +KA
Sbjct: 430 NLDLA-IKTKLITDGLRYSLATGNWGDQKKA 459

[119][TOP]
>UniRef100_B7QNH8 DNA-directed RNA polymerase n=1 Tax=Ixodes scapularis
           RepID=B7QNH8_IXOSC
          Length = 1142

 Score =  171 bits (434), Expect = 2e-41
 Identities = 83/151 (54%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ +RI+Y+++IL KE LPHVGV +  E +K ++ GY++
Sbjct: 310 VIQEQNVALNFIGARGAHPGVTKERRIKYSREILQKEMLPHVGVSDFCETKKAYYLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPL+A LFR  FR +TKE +M  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLMAFLFRGLFRNLTKEVRMYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +IT GL++ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIITDGLRYSLATGNWGDQKKA 459

[120][TOP]
>UniRef100_Q9UVA0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pichia kudriavzevii
           RepID=Q9UVA0_ISSOR
          Length = 905

 Score =  171 bits (434), Expect = 2e-41
 Identities = 82/151 (54%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           +IQSQ+VALDYIG+RGN V + R +RIQ+AKDIL +EFLPH+     +E  K +FFGY+I
Sbjct: 116 LIQSQEVALDYIGRRGNAVGIKRERRIQFAKDILQREFLPHISQDGGHETNKAYFFGYII 175

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           +RLL  AL R+ +DDRDH+G KR+DLAGPLLA LFR  FR+++++    MQR ++ G++ 
Sbjct: 176 NRLLLCALERKEQDDRDHFGKKRLDLAGPLLANLFRILFRKLSRDIYRYMQRCIEHGEDF 235

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           ++    +KS  IT GLK+ LATGNW   +KA
Sbjct: 236 NIVSA-VKSTTITSGLKYSLATGNWGEQKKA 265

[121][TOP]
>UniRef100_A7XIE3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phymatotrichopsis
           omnivora RepID=A7XIE3_9PEZI
          Length = 884

 Score =  171 bits (434), Expect = 2e-41
 Identities = 81/151 (53%), Positives = 114/151 (75%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IGKRGN+  V + KRI+YA+DI+ KE LPH+   E +E RK FF GY++
Sbjct: 113 VIQDREVALDFIGKRGNSQGVNKEKRIRYARDIMQKELLPHISQKEGSETRKAFFLGYMV 172

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HR+L+ AL R+  DDRDH+G KR+DLAGPLLA LFR  ++++TKE    +++ ++  KE 
Sbjct: 173 HRMLQCALERREVDDRDHFGKKRLDLAGPLLAQLFRNLWKQLTKEVYKYLEKCVEGSKEF 232

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L+   +KS+ IT GLK+ LATGNW+S +KA
Sbjct: 233 NLNLA-VKSNTITTGLKYSLATGNWASQKKA 262

[122][TOP]
>UniRef100_A1YID4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Gigaspora gigantea
           RepID=A1YID4_9GLOM
          Length = 894

 Score =  171 bits (434), Expect = 2e-41
 Identities = 83/150 (55%), Positives = 107/150 (71%)
 Frame = +1

Query: 4   IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
           +QS +VA D+IG+RG T   TR KRI+YAK+IL KE LPHV      E RK FF GY++H
Sbjct: 112 VQSTEVAADWIGRRGTTTGATRDKRIKYAKEILQKELLPHVSTEYGCEKRKAFFLGYMVH 171

Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
           RLL  ALGR+  DDRDHYG KR+DLAGPLLA LFR  F+++TK+  + +++ +D  +E +
Sbjct: 172 RLLLAALGRRELDDRDHYGKKRMDLAGPLLASLFRMLFKKLTKDISIYLRKCIDTSREFN 231

Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           LH   IK+  IT GLK+ LATGNW   +KA
Sbjct: 232 LHLA-IKAQTITNGLKYSLATGNWGDQKKA 260

[123][TOP]
>UniRef100_A1YID3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus mosseae
           RepID=A1YID3_GLOMO
          Length = 883

 Score =  171 bits (434), Expect = 2e-41
 Identities = 83/150 (55%), Positives = 108/150 (72%)
 Frame = +1

Query: 4   IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
           +QS +VA D+IG+RG T   TR KRI+YAKDIL KE LPHV      E RK FF GY++H
Sbjct: 112 VQSMEVAADWIGRRGTTTGATRDKRIKYAKDILQKELLPHVSTEYGCEKRKAFFLGYMVH 171

Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
           RLL  ALGR+  DDRDHYG KR+DLAGPLLA LFR  F+++TK+  + +++ +D+ +E +
Sbjct: 172 RLLLAALGRRELDDRDHYGKKRMDLAGPLLASLFRMLFKKLTKDVSIYLRKCIDSNREFN 231

Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           L+   IK+  IT GLK+ LATGNW   +KA
Sbjct: 232 LNLA-IKAQTITNGLKYSLATGNWGDQKKA 260

[124][TOP]
>UniRef100_A1YID2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus mosseae
           RepID=A1YID2_GLOMO
          Length = 883

 Score =  171 bits (434), Expect = 2e-41
 Identities = 83/150 (55%), Positives = 108/150 (72%)
 Frame = +1

Query: 4   IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
           +QS +VA D+IG+RG T   TR KRI+YAKDIL KE LPHV      E RK FF GY++H
Sbjct: 112 VQSMEVAADWIGRRGTTTGATRDKRIKYAKDILQKELLPHVSTEYGCEKRKAFFLGYMVH 171

Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
           RLL  ALGR+  DDRDHYG KR+DLAGPLLA LFR  F+++TK+  + +++ +D+ +E +
Sbjct: 172 RLLLAALGRRELDDRDHYGKKRMDLAGPLLASLFRMLFKKLTKDVSIYLRKCIDSNREFN 231

Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           L+   IK+  IT GLK+ LATGNW   +KA
Sbjct: 232 LNLA-IKAQTITNGLKYSLATGNWGDQKKA 260

[125][TOP]
>UniRef100_A1YID0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mucor hiemalis
           RepID=A1YID0_9FUNG
          Length = 884

 Score =  171 bits (433), Expect = 2e-41
 Identities = 84/151 (55%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ QDVALD+IGKRG TV  TR +RI+YA +IL KE LPHVG     E RK +FFGY+I
Sbjct: 119 VIQDQDVALDFIGKRGTTVGATRERRIKYASEILQKELLPHVGTAYKTETRKSYFFGYMI 178

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDHYG KR+DLAG L++ LFR  F+++TK+    +Q+ +++ +E 
Sbjct: 179 HRLLLAALERRELDDRDHYGKKRMDLAGVLMSGLFRLLFKKLTKDVAKYLQKCIESSREF 238

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +KS+ IT GLK+ LATGNW   +KA
Sbjct: 239 NLTLA-VKSNTITNGLKYSLATGNWGDQKKA 268

[126][TOP]
>UniRef100_UPI00017937B7 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide n=1 Tax=Acyrthosiphon pisum
           RepID=UPI00017937B7
          Length = 1101

 Score =  171 bits (432), Expect = 3e-41
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ KRI+YA++IL KE LPHVGV +  E +K +F GY++
Sbjct: 311 VIQEQNVALNFIGSRGARPGVTKDKRIKYAREILQKEMLPHVGVSDFCETKKAYFLGYMV 370

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  +LGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE +M  Q+ +D GK+ 
Sbjct: 371 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQKFIDRGKDF 430

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +IT GL++ LATGNW   +KA
Sbjct: 431 NLDLA-IKTKLITDGLRYSLATGNWGDQKKA 460

[127][TOP]
>UniRef100_UPI00015B44D8 PREDICTED: similar to ENSANGP00000011389 n=1 Tax=Nasonia
           vitripennis RepID=UPI00015B44D8
          Length = 1175

 Score =  171 bits (432), Expect = 3e-41
 Identities = 83/151 (54%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ +RI+YA++IL KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGARPGVTKERRIKYAREILQKETLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  +LGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE +M  Q+ +D GK+ 
Sbjct: 370 HRLLSASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +IT GL++ LATGNW   +KA
Sbjct: 430 NLELA-IKTKIITDGLRYSLATGNWGDQKKA 459

[128][TOP]
>UniRef100_Q6RYG3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Usnea cornuta
           RepID=Q6RYG3_9LECA
          Length = 903

 Score =  170 bits (431), Expect = 4e-41
 Identities = 82/151 (54%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IGKRGN+  VTR KRI+YA+DI+ KE LPH+   E +E RK FF GY++
Sbjct: 119 VIQDREVALDFIGKRGNSQGVTRDKRIKYARDIMQKELLPHISQVEGSETRKAFFLGYMV 178

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F ++TK+    +Q+ ++  KE 
Sbjct: 179 HRLLQCALGRREVDDRDHFGKKRLDLAGPLLASLFRGTFNKLTKDVYKYLQKCVENNKEF 238

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           ++    +KS  +T GL++ LATGNW   +KA
Sbjct: 239 NMTLA-VKSTHLTNGLRYSLATGNWGDQKKA 268

[129][TOP]
>UniRef100_Q5CY45 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium parvum Iowa II
           RepID=Q5CY45_CRYPV
          Length = 1177

 Score =  170 bits (430), Expect = 5e-41
 Identities = 80/146 (54%), Positives = 103/146 (70%)
 Frame = +1

Query: 10  SQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIHRL 189
           SQDV LD+IGKRG TV   R KRIQYAK++  KE LPHVGV   +E RK +F GY++H+L
Sbjct: 307 SQDVCLDFIGKRGPTVGAAREKRIQYAKELFEKELLPHVGVTSGSESRKAYFIGYMVHKL 366

Query: 190 LRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVSLH 369
              ALGR PEDDRDH+G KR+DLAGPL+A  F QCFR+M K+ +  +QR +D GKE  + 
Sbjct: 367 CLGALGRVPEDDRDHFGKKRLDLAGPLVAASFGQCFRKMMKDVRRLLQRNIDNGKEFDVA 426

Query: 370 GGHIKSDVITKGLKFPLATGNWSSDR 447
           G    +  IT+ +++  ATGNW  D+
Sbjct: 427 GVIRSASYITQTIQYQFATGNWGKDK 452

[130][TOP]
>UniRef100_Q5CN11 DNA-directed RNA polymerase II second largest chain n=1
           Tax=Cryptosporidium hominis RepID=Q5CN11_CRYHO
          Length = 733

 Score =  170 bits (430), Expect = 5e-41
 Identities = 80/146 (54%), Positives = 103/146 (70%)
 Frame = +1

Query: 10  SQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIHRL 189
           SQDV LD+IGKRG TV   R KRIQYAK++  KE LPHVGV   +E RK +F GY++H+L
Sbjct: 307 SQDVCLDFIGKRGPTVGAAREKRIQYAKELFEKELLPHVGVTSGSESRKAYFIGYMVHKL 366

Query: 190 LRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVSLH 369
              ALGR PEDDRDH+G KR+DLAGPL+A  F QCFR+M K+ +  +QR +D GKE  + 
Sbjct: 367 CLGALGRVPEDDRDHFGKKRLDLAGPLVAASFGQCFRKMMKDVRRLLQRNIDNGKEFDVA 426

Query: 370 GGHIKSDVITKGLKFPLATGNWSSDR 447
           G    +  IT+ +++  ATGNW  D+
Sbjct: 427 GVIRSASYITQTIQYQFATGNWGKDK 452

[131][TOP]
>UniRef100_Q6RYI7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Baeomyces sp. SLJ472
           RepID=Q6RYI7_9LECA
          Length = 894

 Score =  170 bits (430), Expect = 5e-41
 Identities = 79/151 (52%), Positives = 113/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IGKRGN+ ++TR KRI+YA+DI+ KE LPH+   E +E RK FF GY++
Sbjct: 110 VIQDREVALDFIGKRGNSNSITRDKRIKYARDIVVKELLPHISQTEGSETRKAFFLGYMV 169

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HR+L+V LGR+  DDRDH+G KR+DLAGPL+A LFR  F ++ K+    +++ +++ +E 
Sbjct: 170 HRMLQVVLGRREPDDRDHFGKKRLDLAGPLMAGLFRMLFNKLVKDVYNYLKKCVESNREF 229

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L  G +KS  +T GLK+ LATGNW   +KA
Sbjct: 230 NLSLG-VKSTTLTNGLKYSLATGNWGDQKKA 259

[132][TOP]
>UniRef100_Q6RYH5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Diploschistes
           muscorum RepID=Q6RYH5_9LECA
          Length = 901

 Score =  170 bits (430), Expect = 5e-41
 Identities = 78/151 (51%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           V+Q ++VALD+IGKR N +   R KRI++A+DI+ KE LPH+   E +E RK FF GY++
Sbjct: 118 VVQDREVALDHIGKRSNALGQPRDKRIRHARDIMQKELLPHISQSEGSETRKAFFLGYMV 177

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HR+L+VALGR+  DDRDH+G KR+DLAGPL+A LFR  F R+TK+    +Q+ ++  ++ 
Sbjct: 178 HRMLQVALGRREPDDRDHFGKKRLDLAGPLMASLFRSLFNRLTKDVLKYLQKCIEGNRDF 237

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           ++  G +KS  +T GLK+ LATGNWS  +KA
Sbjct: 238 NIALG-VKSTTLTNGLKYSLATGNWSEQKKA 267

[133][TOP]
>UniRef100_Q6RYH4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hydnum repandum
           RepID=Q6RYH4_9HOMO
          Length = 887

 Score =  170 bits (430), Expect = 5e-41
 Identities = 81/151 (53%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD IGKRG T  +++ KR++YA++IL KE LPHV +GE +E +K FFFGY+I
Sbjct: 120 VIQEREVALDLIGKRGTTTGLSKDKRLRYAQEILQKEMLPHVSMGEGSESKKAFFFGYMI 179

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  K+ 
Sbjct: 180 HRLLLAALERRELDDRDHFGKKRLDLAGPLLASLFRMLFRKLTKDVYRHLQKCVETHKDF 239

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           ++    +KS+ IT GLK+ LATGNW   +K+
Sbjct: 240 NISIA-VKSNTITNGLKYSLATGNWGDQKKS 269

[134][TOP]
>UniRef100_B6K5Q5 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
           yFS275 RepID=B6K5Q5_SCHJY
          Length = 1210

 Score =  170 bits (430), Expect = 5e-41
 Identities = 85/152 (55%), Positives = 110/152 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ +DVALDYIGKRG+T  VTR KR++YA DIL KE LPH+   E  E RK FF GY++
Sbjct: 309 VIQDKDVALDYIGKRGSTTGVTREKRLRYAHDILQKEMLPHITTLEGFETRKAFFLGYMV 368

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HR+L  AL R+  DDRDH+G KR+DLAGPLLA LFR  F++MT++    MQ+ ++  +E 
Sbjct: 369 HRMLLCALERREPDDRDHFGKKRLDLAGPLLASLFRMLFKKMTRDVYKYMQKCVETNREF 428

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
           +L    +KS+ IT GL++ LATGNW  D+K G
Sbjct: 429 NLTLA-VKSNTITNGLRYSLATGNW-GDQKRG 458

[135][TOP]
>UniRef100_B7FVG3 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP
           1055/1 RepID=B7FVG3_PHATR
          Length = 1212

 Score =  169 bits (429), Expect = 7e-41
 Identities = 84/145 (57%), Positives = 106/145 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ QDVALD+IG+RG+   VT+  R++YA+ IL KE LPHVG  E  E +KGFF GY +
Sbjct: 336 VIQRQDVALDFIGRRGSARDVTKEDRMRYAQAILQKEVLPHVGTEEHCETKKGFFIGYAV 395

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           H+LL   LGR  EDDRDH+G KR+DLAGPLL  LFR  FR++TK+ +  +QR +D GK  
Sbjct: 396 HKLLMCRLGRAEEDDRDHFGKKRLDLAGPLLGGLFRVLFRKLTKDVRKHLQRCLDEGKHF 455

Query: 361 SLHGGHIKSDVITKGLKFPLATGNW 435
           ++ G  IKS+ IT GLK+ LATGNW
Sbjct: 456 NI-GAAIKSNHITDGLKYSLATGNW 479

[136][TOP]
>UniRef100_Q6RYG5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Taphrina deformans
           RepID=Q6RYG5_9ASCO
          Length = 936

 Score =  169 bits (429), Expect = 7e-41
 Identities = 81/150 (54%), Positives = 108/150 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IGKRG+ + VT+ KR++YA+DIL KE LPH+   E  E RK FF GY++
Sbjct: 117 VIQDREVALDFIGKRGSAIGVTKEKRLRYAQDILQKEMLPHITTSEGFETRKAFFLGYMV 176

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  F+R+TK+ +  M + +D+GKE 
Sbjct: 177 HRLLLCALERRDPDDRDHFGKKRIDLAGPLLAGLFRMLFKRLTKDIRQYMTKCVDSGKEF 236

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRK 450
           +L    +K   IT GL++ LATG W   +K
Sbjct: 237 NLPLA-VKHTTITNGLRYSLATGTWGDQKK 265

[137][TOP]
>UniRef100_UPI00017B4CC9 UPI00017B4CC9 related cluster n=1 Tax=Tetraodon nigroviridis
           RepID=UPI00017B4CC9
          Length = 1147

 Score =  169 bits (428), Expect = 9e-41
 Identities = 83/151 (54%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ +RI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 283 VIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 342

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 343 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQKFIDRGKDF 402

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 403 NLELA-IKTRIISDGLKYSLATGNWGDVKKA 432

[138][TOP]
>UniRef100_UPI00016DFC9D UPI00016DFC9D related cluster n=1 Tax=Takifugu rubripes
           RepID=UPI00016DFC9D
          Length = 1045

 Score =  169 bits (428), Expect = 9e-41
 Identities = 83/151 (54%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ +RI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 119 VIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 178

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 179 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQKFIDRGKDF 238

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 239 NLELA-IKTRIISDGLKYSLATGNWGDVKKA 268

[139][TOP]
>UniRef100_Q4T1Y4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon
           nigroviridis RepID=Q4T1Y4_TETNG
          Length = 1217

 Score =  169 bits (428), Expect = 9e-41
 Identities = 83/151 (54%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ +RI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 283 VIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 342

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 343 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQKFIDRGKDF 402

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 403 NLELA-IKTRIISDGLKYSLATGNWGDVKKA 432

[140][TOP]
>UniRef100_UPI0001B09250 DNA directed RNA polymerase II polypeptide B n=1 Tax=Danio rerio
           RepID=UPI0001B09250
          Length = 1174

 Score =  169 bits (427), Expect = 1e-40
 Identities = 83/151 (54%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ +RI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEVLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDVKKA 459

[141][TOP]
>UniRef100_Q6DRH1 RNA polymerase II subunit B (Fragment) n=1 Tax=Danio rerio
           RepID=Q6DRH1_DANRE
          Length = 562

 Score =  169 bits (427), Expect = 1e-40
 Identities = 83/151 (54%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ +RI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEVLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDVKKA 459

[142][TOP]
>UniRef100_C0HA74 DNA-directed RNA polymerase n=1 Tax=Salmo salar RepID=C0HA74_SALSA
          Length = 1174

 Score =  169 bits (427), Expect = 1e-40
 Identities = 83/151 (54%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VT+ +RI+YAK++L KE LPHVGV +  E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEVLPHVGVSDFCETKKAYFLGYMV 369

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQKFIDRGKDF 429

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDVKKA 459

[143][TOP]
>UniRef100_Q873V3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Echinodontium
           tinctorium RepID=Q873V3_9HOMO
          Length = 871

 Score =  169 bits (427), Expect = 1e-40
 Identities = 81/151 (53%), Positives = 110/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ +D+ALD+IG RG T  ++R +RI+YA++IL KE LPHV + E +E RK +FFGY+I
Sbjct: 93  VIQDRDIALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMSEGSESRKAYFFGYMI 152

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  A+ R+  DDRDH+G KR+DLAGPLLA LFR  FR++T++    +Q+ ++  KE 
Sbjct: 153 HRLLLAAMERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTRDVYRHLQKCVETHKEF 212

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L+   IK   IT GLK+ LATGNW   +KA
Sbjct: 213 NLNLA-IKHTTITNGLKYSLATGNWGDQKKA 242

[144][TOP]
>UniRef100_Q207G5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Sparassis crispa
           RepID=Q207G5_9APHY
          Length = 900

 Score =  168 bits (425), Expect = 2e-40
 Identities = 79/151 (52%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  + R +R++YA++IL KE LPH+ + E +E +K +FFGY+I
Sbjct: 102 VIQDREVALDFIGNRGTTTGLNRERRLRYAQEILQKEMLPHISMAEGSESKKAYFFGYMI 161

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ +++ KE 
Sbjct: 162 HRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVESHKEF 221

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L+   +KS+ IT GLK+ LATGNW   +K+
Sbjct: 222 NLNLA-VKSNTITNGLKYSLATGNWGDQKKS 251

[145][TOP]
>UniRef100_C5FJF0 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
           RepID=C5FJF0_NANOT
          Length = 1258

 Score =  168 bits (425), Expect = 2e-40
 Identities = 80/152 (52%), Positives = 115/152 (75%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++ +++ + KR++YA+DI+ KEFLPH+   E +E RK FF GY+
Sbjct: 344 VIQDREVALDFISKRGSSPMSMNQEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 403

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +HRLL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+TK+    +QR ++ G++
Sbjct: 404 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETGRQ 463

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           + L+ G +K+  +T GLK+ LATGNW   +KA
Sbjct: 464 LYLNIG-VKASTLTGGLKYALATGNWGEQKKA 494

[146][TOP]
>UniRef100_A1YIE3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix
           frontalis RepID=A1YIE3_NEOFR
          Length = 915

 Score =  168 bits (425), Expect = 2e-40
 Identities = 80/150 (53%), Positives = 108/150 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ +++ALD+IGKRG TV VT+ KRI+YA +IL KE LPH+G     E +K +FFGY+I
Sbjct: 122 VIQDKEIALDFIGKRGTTVGVTKEKRIRYAAEILQKELLPHIGTRAHTETKKAYFFGYMI 181

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLL  LFR  FR++TK+   ++Q  +D  +E 
Sbjct: 182 HRLLLAALERRECDDRDHFGKKRLDLAGPLLGSLFRMLFRKLTKDVSKTLQMCIDRNREF 241

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRK 450
           +L+   I+ + I+ GLK+ LATGNW +  K
Sbjct: 242 NLNSA-IRPNTISDGLKYSLATGNWGAQSK 270

[147][TOP]
>UniRef100_A1YIE4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix
           frontalis RepID=A1YIE4_NEOFR
          Length = 915

 Score =  167 bits (424), Expect = 3e-40
 Identities = 80/150 (53%), Positives = 108/150 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ +++ALD+IGKRG TV VT+ KR++YA +IL KE LPH+G     E +K +FFGY+I
Sbjct: 122 VIQDKEIALDFIGKRGTTVGVTKEKRMRYAAEILQKELLPHIGTKAHTETKKAYFFGYMI 181

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLL  LFR  FR++T +   S+Q+ +D  +E 
Sbjct: 182 HRLLLAALERRECDDRDHFGKKRLDLAGPLLGSLFRMLFRKLTSDVSKSLQKCIDRNREF 241

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRK 450
           +L+   I+ + IT GLK+ LATGNW +  K
Sbjct: 242 NLNVA-IRPNTITDGLKYSLATGNWGAQSK 270

[148][TOP]
>UniRef100_UPI0000ECC4A8 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1
           Tax=Gallus gallus RepID=UPI0000ECC4A8
          Length = 1176

 Score =  167 bits (423), Expect = 3e-40
 Identities = 84/152 (55%), Positives = 111/152 (73%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGY-V 177
           VIQ Q+VAL++IG RG    VT+ KRI+YAK++L KE LPHVGV +  E +K +F GY +
Sbjct: 311 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYYM 370

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +HRLL  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+
Sbjct: 371 VHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKD 430

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
            +L    IK+ +I+ GLK+ LATGNW   +KA
Sbjct: 431 FNLELA-IKTRIISDGLKYSLATGNWGDQKKA 461

[149][TOP]
>UniRef100_B8C598 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana
           CCMP1335 RepID=B8C598_THAPS
          Length = 1196

 Score =  167 bits (423), Expect = 3e-40
 Identities = 83/145 (57%), Positives = 105/145 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VALD+IG+RG+   VT+  RI+YA  IL KE LPHVG  E  E +KGFF GY +
Sbjct: 318 VIQKQEVALDFIGRRGSARDVTKDDRIRYAAGILQKEVLPHVGTEEHCETKKGFFLGYAV 377

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           H+LL   LGR  EDDRDH+G KR+DLAGPLL  LFR  FR++TK+ +  +QR +D GK  
Sbjct: 378 HKLLMCKLGRADEDDRDHFGKKRLDLAGPLLGGLFRVLFRKLTKDVRKHLQRCLDEGKHF 437

Query: 361 SLHGGHIKSDVITKGLKFPLATGNW 435
           ++ G  IKS+ I+ GLK+ LATGNW
Sbjct: 438 NI-GAAIKSNHISDGLKYSLATGNW 461

[150][TOP]
>UniRef100_Q9UV93 DNA-directed RNA polymerase (Fragment) n=1 Tax=Trichophyton rubrum
           RepID=Q9UV93_TRIRU
          Length = 1109

 Score =  167 bits (423), Expect = 3e-40
 Identities = 80/152 (52%), Positives = 115/152 (75%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++ +++ + KR++YA+DI+ KEFLPH+   E +E RK FF GY+
Sbjct: 291 VIQDREVALDFISKRGSSPMSMNQEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 350

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +HRLL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+TK+    +QR ++ G++
Sbjct: 351 VHRLLQCALGRRYVDDRDHFGKKRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETGRQ 410

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           + L+ G +K+  +T GLK+ LATGNW   +KA
Sbjct: 411 LYLNIG-VKASTLTGGLKYALATGNWGEQKKA 441

[151][TOP]
>UniRef100_Q873V5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dacrymyces
           chrysospermus RepID=Q873V5_9BASI
          Length = 870

 Score =  167 bits (423), Expect = 3e-40
 Identities = 78/150 (52%), Positives = 108/150 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALDYIG+RG T  ++R KR++YA++IL KE LPH+   E  E +K +FFGY++
Sbjct: 100 VIQDREVALDYIGRRGTTTGLSREKRLRYAQEILQKEMLPHISTQEGAESKKAYFFGYMV 159

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRL+  AL R+  DDRDH+G KR+DLAGPLLA LFR  FRR+TK+    MQ+ ++  +E 
Sbjct: 160 HRLVLAALDRRELDDRDHFGKKRLDLAGPLLATLFRMLFRRLTKDVYRYMQKCVETHREF 219

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRK 450
           +++   +K   IT GLK+ LATGNW   +K
Sbjct: 220 NINAA-VKPATITNGLKYSLATGNWGDQKK 248

[152][TOP]
>UniRef100_Q873V0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Gautieria otthii
           RepID=Q873V0_9HOMO
          Length = 856

 Score =  167 bits (423), Expect = 3e-40
 Identities = 78/151 (51%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ +DVALD+IG RG T+ ++R +R++YA++IL KE LPH+ + E  E +K +FFGY++
Sbjct: 96  VIQDRDVALDFIGNRGTTIGLSRDRRLRYAQEILQKEMLPHIAMSEGAESKKAYFFGYMV 155

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 156 HRLLLAALERRELDDRDHFGKKRLDLAGPLLASLFRMLFRKLTKDVYRYLQKCVETHKEF 215

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L+   +K + IT GLK+ LATGNW   +K+
Sbjct: 216 NLNLA-VKPNTITNGLKYSLATGNWGDQKKS 245

[153][TOP]
>UniRef100_Q6RYG7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pneumocystis carinii
           RepID=Q6RYG7_PNECA
          Length = 898

 Score =  167 bits (423), Expect = 3e-40
 Identities = 81/150 (54%), Positives = 108/150 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IGKRG+ V + R KR++YA+DIL KE LPH+   E  E RK FF GY+I
Sbjct: 118 VIQEREVALDFIGKRGSAVGINREKRLRYAQDILQKELLPHITTTEGYETRKAFFLGYMI 177

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  F+++TK+    MQ+ ++  +E 
Sbjct: 178 HRLLLCALERRDPDDRDHFGKKRLDLAGPLLANLFRMLFKKLTKDVYKYMQKCVETNREF 237

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRK 450
           +L    +KS+ IT GL++ LATGNW   +K
Sbjct: 238 NLTLA-VKSNTITHGLRYSLATGNWGDQKK 266

[154][TOP]
>UniRef100_Q6CAD6 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
           RepID=Q6CAD6_YARLI
          Length = 1229

 Score =  167 bits (423), Expect = 3e-40
 Identities = 79/151 (52%), Positives = 110/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALDYIG+RG+ V V R +R++YA+DIL KE LPH+   E  E RK +F GY++
Sbjct: 315 VIQDREVALDYIGRRGSAVGVNRERRVRYARDILQKELLPHITQEEGFETRKAYFLGYMV 374

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HR+L VALGR+  DDRDH+G KR+DLAGPL+A +FR  F+++TK+    M + ++  K+ 
Sbjct: 375 HRMLLVALGRKEPDDRDHFGKKRLDLAGPLMAGIFRMLFKKLTKDIYRYMLKCVETNKDF 434

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +KS+ IT GLK+ LATGNW   +KA
Sbjct: 435 NLTLA-VKSNTITNGLKYSLATGNWGDQKKA 464

[155][TOP]
>UniRef100_UPI0001926137 PREDICTED: similar to predicted protein n=1 Tax=Hydra
           magnipapillata RepID=UPI0001926137
          Length = 1426

 Score =  167 bits (422), Expect = 4e-40
 Identities = 80/151 (52%), Positives = 108/151 (71%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           V+Q Q+VAL++IG RG    VT+ KRI+YA++IL KE LPHVG  +  E +K +F GY++
Sbjct: 315 VVQEQNVALNFIGTRGARPGVTKEKRIKYAREILQKEMLPHVGTSDFCETKKAYFLGYMV 374

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HR+L  ALGR+  DDRDHYGNKR+DLAGPLLA LFR  F+ + KE ++  Q+ +D GK+ 
Sbjct: 375 HRILLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRLYAQKFIDKGKDF 434

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
            +    IK+  IT GL++ LATGNW   +KA
Sbjct: 435 KIELA-IKTKTITDGLRYSLATGNWGDQKKA 464

[156][TOP]
>UniRef100_Q6RYG9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Peltigera
           membranacea RepID=Q6RYG9_9LECA
          Length = 895

 Score =  167 bits (422), Expect = 4e-40
 Identities = 77/151 (50%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RGN+ +++R KR++YA+DI+ KE LPH+   + +E +K FF GY++
Sbjct: 111 VIQDREVALDWIGSRGNSQSLSRPKRVKYARDIMQKELLPHISQTDGSETKKAFFLGYMV 170

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HR+L+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F ++TK+    +Q+ ++  +E 
Sbjct: 171 HRMLQCALGRREVDDRDHFGKKRLDLAGPLLAGLFRMLFNKLTKDVFKYLQKCVENNREF 230

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L  G +KS  +T GLK+ LATGNW   +KA
Sbjct: 231 NLTLG-VKSTTLTNGLKYSLATGNWGDQKKA 260

[157][TOP]
>UniRef100_Q207G7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Polyporus squamosus
           RepID=Q207G7_9APHY
          Length = 898

 Score =  167 bits (422), Expect = 4e-40
 Identities = 78/151 (51%), Positives = 110/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ +++ALD+IG RG T+ + R +R++YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 103 VIQDREIALDFIGNRGTTIGLNRERRLRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 162

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 163 HRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRHLQKCVEMNKEF 222

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K + IT GLK+ LATGNW   +K+
Sbjct: 223 NLSLA-VKHNTITNGLKYSLATGNWGDQKKS 252

[158][TOP]
>UniRef100_Q9UV78 DNA-directed RNA polymerase (Fragment) n=1 Tax=Morchella elata
           RepID=Q9UV78_9PEZI
          Length = 927

 Score =  166 bits (421), Expect = 6e-40
 Identities = 77/151 (50%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IGKRG++  + + KRI+YA+DI+ KE LPH+   E +E RK FF GY++
Sbjct: 119 VIQDREVALDFIGKRGSSQGINKEKRIRYARDIMQKELLPHISQSEGSETRKAFFLGYMV 178

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HR+L+ AL R+  DDRDH+G KR+DLAGPLLA LFR  ++++TK+    +++ ++ GK+ 
Sbjct: 179 HRMLQCALERREVDDRDHFGKKRLDLAGPLLAGLFRTLWKKLTKDVYKYLEKCVETGKDF 238

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +KS+ IT GLK+ LATGNW   +KA
Sbjct: 239 NLTLA-VKSNTITNGLKYSLATGNWGEQKKA 268

[159][TOP]
>UniRef100_Q873T6 RNA polymerase II subunit RPB2 (Fragment) n=1 Tax=Polyporus
           arcularius RepID=Q873T6_9APHY
          Length = 750

 Score =  166 bits (421), Expect = 6e-40
 Identities = 79/151 (52%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ +++ALDYIG RG T  + R +R++YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 95  VIQDREIALDYIGNRGTTTGLNRERRLRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 154

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 155 HRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 214

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K + IT GLK+ LATGNW   +K+
Sbjct: 215 NLSLA-VKHNTITNGLKYSLATGNWGDQKKS 244

[160][TOP]
>UniRef100_Q207G6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pycnoporus sp.
           ZW02.30 RepID=Q207G6_9APHY
          Length = 896

 Score =  166 bits (421), Expect = 6e-40
 Identities = 79/151 (52%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ +++ALDYIG RG T  + R +R++YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 103 VIQDREIALDYIGNRGTTTGLNRERRLRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 162

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 163 HRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 222

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K + IT GLK+ LATGNW   +K+
Sbjct: 223 NLSLA-VKHNTITNGLKYSLATGNWGDQKKS 252

[161][TOP]
>UniRef100_Q873S3 RNA polymerase II subunit RPB2 (Fragment) n=1 Tax=Coltricia
           perennis RepID=Q873S3_9HOMO
          Length = 803

 Score =  166 bits (420), Expect = 7e-40
 Identities = 78/151 (51%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ +++ALD+IG RG    ++R KRI+YA++IL KE LPH+ + E +E +K +F GY+I
Sbjct: 111 VIQDREIALDFIGNRGTATGLSREKRIRYAQEILQKEMLPHISMSEGSESKKAYFLGYMI 170

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR+MTK+    +Q+ +++ +E 
Sbjct: 171 HRLLLAALERRELDDRDHFGKKRLDLAGPLLAGLFRMLFRKMTKDVYRYLQKCVESHREF 230

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +++   +K++VIT GLK+ LATGNW   +KA
Sbjct: 231 NINLA-VKTNVITNGLKYSLATGNWGDQKKA 260

[162][TOP]
>UniRef100_Q6RYG8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phragmidium sp. MB
           RepID=Q6RYG8_9BASI
          Length = 931

 Score =  166 bits (420), Expect = 7e-40
 Identities = 77/150 (51%), Positives = 110/150 (73%)
 Frame = +1

Query: 4   IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
           IQ Q+VALD+IG+RG +  ++R +R+QYA++IL KE LPH+ + E  + +K +FFGY++H
Sbjct: 121 IQEQEVALDFIGRRGTSTGLSRERRLQYAEEILQKEMLPHISMSEGQQGKKAYFFGYMVH 180

Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
           RLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  K  +
Sbjct: 181 RLLLAALDRRDLDDRDHFGKKRLDLAGPLLASLFRILFRKLTKDVYRHLQKCVEMQKPFN 240

Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           L+   +KS+ IT GLK+ LATGNW   +KA
Sbjct: 241 LNAA-VKSNTITNGLKYSLATGNWGDQKKA 269

[163][TOP]
>UniRef100_Q207G2 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Trametes versicolor RepID=Q207G2_TRAVE
          Length = 518

 Score =  166 bits (420), Expect = 7e-40
 Identities = 79/150 (52%), Positives = 107/150 (71%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ +++ALDYIG RG T  + R +R++YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 92  VIQDREIALDYIGNRGTTTGLNRERRLRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 151

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  A  R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 152 HRLLLAAFERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 211

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRK 450
            L G  +K + IT GLK+ LATGNW   +K
Sbjct: 212 QL-GLAVKHNTITNGLKYSLATGNWGDQKK 240

[164][TOP]
>UniRef100_Q10578 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Caenorhabditis
           elegans RepID=RPB2_CAEEL
          Length = 1193

 Score =  166 bits (420), Expect = 7e-40
 Identities = 83/151 (54%), Positives = 108/151 (71%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VTR +RI+YA++IL KE LPHVGV E  E +K FF GY++
Sbjct: 316 VIQEQNVALNFIGARGAKPGVTREQRIKYAREILQKELLPHVGVSEHCETKKAFFIGYMV 375

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDH GNKR+DLAGPLLA LFR  FR + KE +M+ Q+ ++   + 
Sbjct: 376 HRLLLAALGRRELDDRDHIGNKRLDLAGPLLAFLFRSLFRNLLKEMRMTAQKYINKNDDF 435

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K+  IT+GL + LATGNW   +KA
Sbjct: 436 AL-DVCVKTSTITRGLTYSLATGNWGDQKKA 465

[165][TOP]
>UniRef100_UPI0000221AC5 hypothetical protein CBG18197 n=1 Tax=Caenorhabditis briggsae AF16
           RepID=UPI0000221AC5
          Length = 1194

 Score =  166 bits (419), Expect = 1e-39
 Identities = 83/151 (54%), Positives = 108/151 (71%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VTR +RI+YA++IL KE LPHVGV E  E +K FF GY++
Sbjct: 317 VIQEQNVALNFIGARGAKPGVTREQRIKYAREILQKELLPHVGVSEHCETKKAFFIGYMV 376

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDH GNKR+DLAGPLLA LFR  FR + KE +M+ Q+ ++   + 
Sbjct: 377 HRLLLAALGRRELDDRDHIGNKRLDLAGPLLAFLFRALFRNLLKEMRMTAQKYINKNDDF 436

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K+  IT+GL + LATGNW   +KA
Sbjct: 437 AL-DVCVKTSTITRGLAYSLATGNWGDQKKA 466

[166][TOP]
>UniRef100_A8XS50 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae
           RepID=A8XS50_CAEBR
          Length = 1215

 Score =  166 bits (419), Expect = 1e-39
 Identities = 83/151 (54%), Positives = 108/151 (71%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ Q+VAL++IG RG    VTR +RI+YA++IL KE LPHVGV E  E +K FF GY++
Sbjct: 338 VIQEQNVALNFIGARGAKPGVTREQRIKYAREILQKELLPHVGVSEHCETKKAFFIGYMV 397

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  ALGR+  DDRDH GNKR+DLAGPLLA LFR  FR + KE +M+ Q+ ++   + 
Sbjct: 398 HRLLLAALGRRELDDRDHIGNKRLDLAGPLLAFLFRALFRNLLKEMRMTAQKYINKNDDF 457

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K+  IT+GL + LATGNW   +KA
Sbjct: 458 AL-DVCVKTSTITRGLAYSLATGNWGDQKKA 487

[167][TOP]
>UniRef100_Q9UVA3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Agaricus bisporus
           RepID=Q9UVA3_AGABI
          Length = 914

 Score =  166 bits (419), Expect = 1e-39
 Identities = 80/151 (52%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 115 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 174

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 175 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 234

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K   IT GLK+ LATGNW   +K+
Sbjct: 235 NL-ALAVKHQTITNGLKYSLATGNWGDQKKS 264

[168][TOP]
>UniRef100_Q873V7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Chondrostereum
           purpureum RepID=Q873V7_9AGAR
          Length = 770

 Score =  166 bits (419), Expect = 1e-39
 Identities = 80/151 (52%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 106 VIQDREVALDFIGNRGTTTGLSRDRRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 165

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 166 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 225

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K   IT GLK+ LATGNW   +K+
Sbjct: 226 NLSLA-VKHQTITNGLKYSLATGNWGDQKKS 255

[169][TOP]
>UniRef100_Q873U3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Lycoperdon pyriforme
           RepID=Q873U3_9AGAR
          Length = 849

 Score =  166 bits (419), Expect = 1e-39
 Identities = 80/151 (52%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 90  VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 149

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 150 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 209

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K   IT GLK+ LATGNW   +K+
Sbjct: 210 NL-ALAVKHQTITNGLKYSLATGNWGDQKKS 239

[170][TOP]
>UniRef100_Q873T2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Henningsomyces
           candidus RepID=Q873T2_9AGAR
          Length = 848

 Score =  166 bits (419), Expect = 1e-39
 Identities = 80/151 (52%), Positives = 110/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  ++R KRI+YA++IL KE +PHV + E +E +K +FFGY+I
Sbjct: 91  VIQDREVALDFIGNRGTTTGLSRDKRIRYAQEILQKEMIPHVSMAEGSESKKAYFFGYMI 150

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR+++K+    +Q+ ++A KE 
Sbjct: 151 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLSKDVYRYLQKCVEAQKEF 210

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K   IT GLK+ LATGNW   +K+
Sbjct: 211 NL-ALAVKHQTITNGLKYSLATGNWGDQKKS 240

[171][TOP]
>UniRef100_Q5S3M2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phyllotopsis sp.
           MB35 RepID=Q5S3M2_9APHY
          Length = 889

 Score =  166 bits (419), Expect = 1e-39
 Identities = 80/151 (52%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 97  VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 156

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 157 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 216

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K   IT GLK+ LATGNW   +K+
Sbjct: 217 NL-ALAVKHQTITNGLKYSLATGNWGDQKKS 246

[172][TOP]
>UniRef100_Q27S75 DNA-directed RNA polymerase (Fragment) n=1 Tax=Macrolepiota
           dolichaula RepID=Q27S75_9AGAR
          Length = 882

 Score =  166 bits (419), Expect = 1e-39
 Identities = 80/151 (52%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 98  VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 157

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 158 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 217

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K   IT GLK+ LATGNW   +K+
Sbjct: 218 NL-ALAVKHQTITNGLKYSLATGNWGDQKKS 247

[173][TOP]
>UniRef100_Q207H1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ganoderma tsugae
           RepID=Q207H1_GANTS
          Length = 883

 Score =  166 bits (419), Expect = 1e-39
 Identities = 78/151 (51%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ +++ALDYIG RG T  + R +R++YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 97  VIQDREIALDYIGNRGTTTGLNRERRLRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 156

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 157 HRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 216

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           ++    +K + IT GLK+ LATGNW   +K+
Sbjct: 217 NISLA-VKHNTITNGLKYSLATGNWGDQKKS 246

[174][TOP]
>UniRef100_B0CRB3 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
           RepID=B0CRB3_LACBS
          Length = 942

 Score =  166 bits (419), Expect = 1e-39
 Identities = 80/151 (52%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 108 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 167

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 168 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 227

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K   IT GLK+ LATGNW   +K+
Sbjct: 228 NL-ALAVKHQTITNGLKYSLATGNWGDQKKS 257

[175][TOP]
>UniRef100_Q5U7W8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Albatrellus
           higanensis RepID=Q5U7W8_9HOMO
          Length = 913

 Score =  165 bits (418), Expect = 1e-39
 Identities = 79/151 (52%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  + R +R++YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 102 VIQDREVALDFIGNRGTTTGLNRERRLRYAQEILQKEMLPHVSMNEGSESKKAYFFGYMI 161

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 162 HRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 221

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K + IT GLK+ LATGNW   +K+
Sbjct: 222 NLSLA-VKHNTITNGLKYSLATGNWGDQKKS 251

[176][TOP]
>UniRef100_Q207G9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Laetiporus
           sulphureus RepID=Q207G9_9APHY
          Length = 897

 Score =  165 bits (418), Expect = 1e-39
 Identities = 78/151 (51%), Positives = 110/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  + R +R++YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 102 VIQDREVALDFIGNRGTTTGLNRERRLRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 161

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  A+ R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 162 HRLLLAAMERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 221

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L+   +K + IT GLK+ LATGNW   +K+
Sbjct: 222 NLNLA-VKHNTITNGLKYSLATGNWGDQKKS 251

[177][TOP]
>UniRef100_Q9UVA2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neolecta vitellina
           RepID=Q9UVA2_9ASCO
          Length = 930

 Score =  165 bits (417), Expect = 2e-39
 Identities = 80/151 (52%), Positives = 110/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ +D+ALDYIGKRG T  ++R +RI++A++I+ KE LPHV   E  E RK FF GY++
Sbjct: 120 VIQEKDLALDYIGKRGQTTGLSRDRRIRHAREIMQKELLPHVSQTEGYESRKAFFLGYMV 179

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL VAL R+ +DDRDH+G KR+DLAGPLLA LFR  F+++ K+    MQ+ ++  +E 
Sbjct: 180 HRLLLVALERREQDDRDHFGKKRLDLAGPLLANLFRMLFKKLYKDVYRYMQKCVENNREF 239

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K+  IT+GLK+ LATGNW   +KA
Sbjct: 240 NLTLA-VKAPTITQGLKYSLATGNWGEQKKA 269

[178][TOP]
>UniRef100_Q9UV94 DNA-directed RNA polymerase (Fragment) n=1 Tax=Byssochlamys nivea
           RepID=Q9UV94_9EURO
          Length = 905

 Score =  165 bits (417), Expect = 2e-39
 Identities = 77/152 (50%), Positives = 113/152 (74%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++  ++   +R++YA++I+ KEFLPH+   E +E RK FF GY+
Sbjct: 120 VIQDREVALDFISKRGSSQTSMNHERRVRYAREIMQKEFLPHISQSEGSETRKAFFLGYM 179

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +HRLL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+T++ +  +QR ++  +E
Sbjct: 180 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLATLFRTLFTRVTRDLQRYVQRCVETNRE 239

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           + L+ G +K+  +T GLK+ LATGNW   +KA
Sbjct: 240 IYLNIG-VKASTLTGGLKYALATGNWGEQKKA 270

[179][TOP]
>UniRef100_Q5S3L8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Strobilomyces
           floccopus RepID=Q5S3L8_9HOMO
          Length = 908

 Score =  165 bits (417), Expect = 2e-39
 Identities = 79/151 (52%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 102 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 161

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  F+++TK+    +Q+ ++  KE 
Sbjct: 162 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFKKLTKDVYRYLQKCVETHKEF 221

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K   IT GLK+ LATGNW   +K+
Sbjct: 222 NLSLA-VKHQTITNGLKYSLATGNWGDQKKS 251

[180][TOP]
>UniRef100_Q5S2C2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Boletellus
           projectellus RepID=Q5S2C2_9HOMO
          Length = 899

 Score =  165 bits (417), Expect = 2e-39
 Identities = 79/151 (52%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 111 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 170

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  F+++TK+    +Q+ ++  KE 
Sbjct: 171 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFKKLTKDVYRYLQKCVETHKEF 230

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K   IT GLK+ LATGNW   +K+
Sbjct: 231 NLSLA-VKHQTITNGLKYSLATGNWGDQKKS 260

[181][TOP]
>UniRef100_Q2ERY8 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Serpula
           himantioides RepID=Q2ERY8_9HOMO
          Length = 526

 Score =  165 bits (417), Expect = 2e-39
 Identities = 79/151 (52%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 93  VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 152

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++T++    +Q+ ++  KE 
Sbjct: 153 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTRDVYRYLQKCVETHKEF 212

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K   IT GLK+ LATGNW   +K+
Sbjct: 213 NLSLA-VKHQTITNGLKYSLATGNWGDQKKS 242

[182][TOP]
>UniRef100_Q207G4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spongipellis
           pachyodon RepID=Q207G4_9APHY
          Length = 901

 Score =  165 bits (417), Expect = 2e-39
 Identities = 78/151 (51%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  + R +R++YA++IL KE LPH+ + E +E +K +FFGY+I
Sbjct: 106 VIQDREVALDFIGNRGTTTGLNRERRLRYAQEILQKEMLPHISMAEGSESKKAYFFGYMI 165

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 166 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 225

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K + IT GLK+ LATGNW   +K+
Sbjct: 226 NLSLA-VKHNTITNGLKYSLATGNWGDQKKS 255

[183][TOP]
>UniRef100_Q1WMR3 DNA-directed RNA polymerase n=1 Tax=Coprinellus disseminatus
           RepID=Q1WMR3_COPDI
          Length = 1241

 Score =  165 bits (417), Expect = 2e-39
 Identities = 79/150 (52%), Positives = 108/150 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  ++R +RI+YA++IL KE LPH+ + E +E +K +FFGY+I
Sbjct: 347 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHISMAEGSESKKAYFFGYMI 406

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 407 HRLLLAALERRELDDRDHFGKKRLDLAGPLLAGLFRMLFRKLTKDVYRYLQKCVETHKEF 466

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRK 450
           +L    +K   IT GLK+ LATGNW   +K
Sbjct: 467 NLTLA-VKQQTITNGLKYSLATGNWGDQKK 495

[184][TOP]
>UniRef100_C5DLS0 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS
           6340 RepID=C5DLS0_LACTC
          Length = 1220

 Score =  165 bits (417), Expect = 2e-39
 Identities = 81/151 (53%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++ ALD+IG+RG  + + + KRIQYAKDIL KEFLPH+   E  E RK FF GY+I
Sbjct: 318 VIQDRETALDFIGRRGTALGIKKEKRIQYAKDILQKEFLPHITQLEGFESRKAFFLGYMI 377

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           +RLL  AL R+ +DDRDH+G KR+DLAGPLLA LF+  FR++T++    MQR+++  K+ 
Sbjct: 378 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTRDILRFMQRSVEEAKDF 437

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K+  IT GLK+ LATGNW   +KA
Sbjct: 438 NLKLA-VKATTITAGLKYALATGNWGEQKKA 467

[185][TOP]
>UniRef100_Q753Q4 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Eremothecium
           gossypii RepID=RPB2_ASHGO
          Length = 1222

 Score =  165 bits (417), Expect = 2e-39
 Identities = 81/151 (53%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++ ALD+IG+RG  + + + KRIQYAKDIL KEFLPH+   E  E RK FF GY+I
Sbjct: 318 VIQDRETALDFIGRRGTALGIKKEKRIQYAKDILQKEFLPHITQLEGFESRKAFFLGYMI 377

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           +RLL  AL R+ +DDRDH+G KR+DLAGPLLA LF+  FR++T++    MQR+++  K+ 
Sbjct: 378 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTRDILRFMQRSVEEAKDF 437

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K+  IT GLK+ LATGNW   +KA
Sbjct: 438 NLKLA-VKATTITAGLKYALATGNWGEQKKA 467

[186][TOP]
>UniRef100_Q6RYG2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ustilago maydis
           RepID=Q6RYG2_USTMA
          Length = 887

 Score =  164 bits (416), Expect = 2e-39
 Identities = 76/151 (50%), Positives = 106/151 (70%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ +DVALD+IG+RG T  ++RAKR  YA++IL KE LPH+   E +  +K +FFGY+I
Sbjct: 118 VIQDRDVALDFIGRRGTTTGLSRAKRTVYAQEILQKEMLPHISTSEGSNTKKAYFFGYMI 177

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DL GPL+A LFR  FR++T++    +Q+ ++  +E 
Sbjct: 178 HRLLLAALDRREIDDRDHFGKKRIDLGGPLMANLFRMLFRKVTRDVYRHLQKCVEEHREF 237

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
            +    +KS  IT GL++ LATGNW   +KA
Sbjct: 238 HIQAA-VKSSTITNGLRYSLATGNWGDQKKA 267

[187][TOP]
>UniRef100_Q5S3L7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Suillus pictus
           RepID=Q5S3L7_9HOMO
          Length = 899

 Score =  164 bits (416), Expect = 2e-39
 Identities = 79/151 (52%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 111 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMSEGSESKKAYFFGYMI 170

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  F+++T++    +Q+ ++  KE 
Sbjct: 171 HRLLLAALERRELDDRDHFGKKRLDLAGPLLAGLFRMLFKKLTRDVYRYLQKCVETHKEF 230

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K   IT GLK+ LATGNW   +KA
Sbjct: 231 NLSLA-VKHQTITNGLKYSLATGNWGDQKKA 260

[188][TOP]
>UniRef100_A8N2R8 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea
           okayama7#130 RepID=A8N2R8_COPC7
          Length = 1222

 Score =  164 bits (416), Expect = 2e-39
 Identities = 79/151 (52%), Positives = 108/151 (71%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  + R +RI+YA++IL KE LPH+ + E +E +K +FFGY+I
Sbjct: 329 VIQDREVALDFIGNRGTTTGLPRDRRIRYAQEILQKEMLPHISMAEGSESKKAYFFGYMI 388

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 389 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 448

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K   IT GLK+ LATGNW   +K+
Sbjct: 449 NLSLA-VKHQTITNGLKYSLATGNWGDQKKS 478

[189][TOP]
>UniRef100_B6AET6 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
           RepID=B6AET6_9CRYT
          Length = 1184

 Score =  164 bits (415), Expect = 3e-39
 Identities = 80/146 (54%), Positives = 102/146 (69%)
 Frame = +1

Query: 10  SQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIHRL 189
           SQ+V LD+IGKRG TV   R KRIQYA+++L +E LPHVGV    E RK +F GY++HRL
Sbjct: 299 SQEVCLDFIGKRGPTVGAIREKRIQYARELLEREVLPHVGVTIGCEFRKAYFIGYMVHRL 358

Query: 190 LRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVSLH 369
              ALGR PEDDRDH+G KR+DLAGPL+A  F Q FR+M K+ +  +QR +D GKE  + 
Sbjct: 359 CMGALGRVPEDDRDHFGKKRLDLAGPLVAASFGQSFRKMMKDMRRLLQRNIDNGKEFDVA 418

Query: 370 GGHIKSDVITKGLKFPLATGNWSSDR 447
           G    +  IT+ L++  ATGNW  DR
Sbjct: 419 GVIRSASYITQTLQYQFATGNWGKDR 444

[190][TOP]
>UniRef100_Q2ERZ0 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Boletinellus merulioides RepID=Q2ERZ0_9HOMO
          Length = 315

 Score =  164 bits (415), Expect = 3e-39
 Identities = 78/151 (51%), Positives = 110/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 113 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 172

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  F+++T++    +Q+ +++ KE 
Sbjct: 173 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFKKLTRDVYRYLQKCVESHKEF 232

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K   IT GLK+ LATGNW   +K+
Sbjct: 233 NLSLA-VKHQTITNGLKYSLATGNWGDQKKS 262

[191][TOP]
>UniRef100_Q27S79 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Cylindrobasidium evolvens RepID=Q27S79_9HOMO
          Length = 763

 Score =  164 bits (415), Expect = 3e-39
 Identities = 79/151 (52%), Positives = 108/151 (71%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG    ++R KRI+YA++IL KE LPH+ + E +E +K +FFGY+I
Sbjct: 89  VIQDREVALDFIGNRGTQTGLSREKRIRYAQEILQKEMLPHISMSEGSESKKAYFFGYMI 148

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++T++    +Q+ ++  KE 
Sbjct: 149 HRLLMAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTRDVYRHLQKCVETRKEF 208

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
             + G IK   IT GLK+ LATGNW   +K+
Sbjct: 209 IPNQG-IKHHTITNGLKYSLATGNWGDQKKS 238

[192][TOP]
>UniRef100_Q207H6 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Nia
           vibrissa RepID=Q207H6_9AGAR
          Length = 524

 Score =  164 bits (415), Expect = 3e-39
 Identities = 78/151 (51%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  ++R +RI+YA++IL KE LPH+ + E +E +K +FFGY++
Sbjct: 97  VIQDREVALDFIGNRGTTTGLSRDRRIRYAQEILQKEMLPHISMTEGSESKKAYFFGYMV 156

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 157 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETRKEF 216

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K   IT GLK+ LATGNW   +K+
Sbjct: 217 NLSLA-VKHQTITNGLKYSLATGNWGDQKKS 246

[193][TOP]
>UniRef100_B6HM08 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum
           Wisconsin 54-1255 RepID=B6HM08_PENCW
          Length = 1255

 Score =  164 bits (415), Expect = 3e-39
 Identities = 79/152 (51%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVA-VTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++ + +   +R++YA+DI+ KE LPH+   E +E RK FF GY+
Sbjct: 341 VIQDREVALDFIAKRGSSQSNLNHDRRVRYARDIMQKELLPHISQNEGSETRKAFFLGYM 400

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +HRLL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+TK+ +  +QR ++  +E
Sbjct: 401 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLASLFRTLFTRVTKDLQRYVQRCVETNRE 460

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           + L+ G IK+  +T GLK+ LATGNW   +KA
Sbjct: 461 IYLNIG-IKASTLTGGLKYALATGNWGEQKKA 491

[194][TOP]
>UniRef100_Q6CWA5 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
           RepID=Q6CWA5_KLULA
          Length = 1221

 Score =  164 bits (414), Expect = 4e-39
 Identities = 80/151 (52%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++ ALD+IG+RG  + + + KRIQYAKDIL KEFLPH+   E  E RK FF GY+I
Sbjct: 317 VIQDRETALDFIGRRGTALGIKKEKRIQYAKDILQKEFLPHITQLEGFESRKAFFLGYMI 376

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           +RLL  AL R+ +DDRDH+G KR+DLAGPLLA LF+  FR++T++    MQR+++  K+ 
Sbjct: 377 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTRDILRFMQRSVEEAKDF 436

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K+  IT GLK+ LATGNW   +K+
Sbjct: 437 NLKLA-VKATTITAGLKYALATGNWGEQKKS 466

[195][TOP]
>UniRef100_Q5S3M4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hygrophoropsis
           aurantiaca RepID=Q5S3M4_9HOMO
          Length = 863

 Score =  164 bits (414), Expect = 4e-39
 Identities = 78/151 (51%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 67  VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 126

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  F+++T++    +Q+ ++  KE 
Sbjct: 127 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFKKLTRDVYRYLQKCVETHKEF 186

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K   IT GLK+ LATGNW   +K+
Sbjct: 187 NLSLA-VKHQTITNGLKYSLATGNWGDQKKS 216

[196][TOP]
>UniRef100_Q1DPF0 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis
           RepID=Q1DPF0_COCIM
          Length = 1152

 Score =  164 bits (414), Expect = 4e-39
 Identities = 78/152 (51%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++  ++   KR++YA+DI+ KEFLPH+   E +E RK FF GY+
Sbjct: 292 VIQDREVALDFISKRGSSPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 351

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +H+LL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+TK+    +QR ++  ++
Sbjct: 352 VHKLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETNRQ 411

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           + L+ G +K+  +T GLK+ LATGNW   +KA
Sbjct: 412 LYLNIG-VKASTLTGGLKYALATGNWGEQKKA 442

[197][TOP]
>UniRef100_C5PAW2 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735
           delta SOWgp RepID=C5PAW2_COCP7
          Length = 1258

 Score =  164 bits (414), Expect = 4e-39
 Identities = 78/152 (51%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++  ++   KR++YA+DI+ KEFLPH+   E +E RK FF GY+
Sbjct: 345 VIQDREVALDFISKRGSSPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 404

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +H+LL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+TK+    +QR ++  ++
Sbjct: 405 VHKLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETNRQ 464

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           + L+ G +K+  +T GLK+ LATGNW   +KA
Sbjct: 465 LYLNIG-VKASTLTGGLKYALATGNWGEQKKA 495

[198][TOP]
>UniRef100_Q9UV79 DNA-directed RNA polymerase (Fragment) n=1 Tax=Peziza quelepidotia
           RepID=Q9UV79_9PEZI
          Length = 927

 Score =  163 bits (413), Expect = 5e-39
 Identities = 76/151 (50%), Positives = 111/151 (73%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ +++ALD+IG+RG++  V + KR++YA++IL KEFLPH+   E +E RK FF GY++
Sbjct: 119 VIQKREIALDFIGRRGSSSGVAKDKRVRYAREILQKEFLPHISQKEGSETRKAFFLGYMV 178

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           H++L  AL R+  DDRDH+G KR+DLAGPLLA LFR  F+++TK+    +Q+ +++ +E 
Sbjct: 179 HQMLLCALERKEPDDRDHFGKKRLDLAGPLLAGLFRTLFKKLTKDVYKYLQKCVESSREF 238

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +KS  IT GLK+ LATGNW   +KA
Sbjct: 239 NLTLA-VKSTTITNGLKYSLATGNWGEQKKA 268

[199][TOP]
>UniRef100_Q6RYI9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Amanita phalloides
           RepID=Q6RYI9_AMAPH
          Length = 917

 Score =  163 bits (413), Expect = 5e-39
 Identities = 79/151 (52%), Positives = 108/151 (71%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 118 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMSEGSESKKAYFFGYMI 177

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    + + ++  KE 
Sbjct: 178 HRLLVAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLSKCVETHKEF 237

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K   IT GLK+ LATGNW   +K+
Sbjct: 238 NL-ALAVKHQTITNGLKYSLATGNWGDQKKS 267

[200][TOP]
>UniRef100_Q5RM00 DNA-directed RNA polymerase (Fragment) n=1 Tax=Fomitiporia
           mediterranea RepID=Q5RM00_9HOMO
          Length = 898

 Score =  163 bits (413), Expect = 5e-39
 Identities = 77/151 (50%), Positives = 108/151 (71%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG    + R KR++YA++IL KE LPH+ + E +E +K +FFGY+I
Sbjct: 88  VIQDREVALDFIGNRGTATGLNRDKRLRYAQEILQKEMLPHISMAEGSESKKAYFFGYMI 147

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLL  LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 148 HRLLLAALERRELDDRDHFGKKRLDLAGPLLTGLFRMLFRKLTKDVYRYLQKCVETHKEF 207

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +++   IK+  +T GLK+ LATGNW   +KA
Sbjct: 208 NINMA-IKTQTLTNGLKYSLATGNWGDQKKA 237

[201][TOP]
>UniRef100_Q207G3 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Steccherinum laeticolor RepID=Q207G3_9APHY
          Length = 556

 Score =  163 bits (413), Expect = 5e-39
 Identities = 78/151 (51%), Positives = 109/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  + R +R++YA++IL KE LPH+ + E +E +K +FFGY+I
Sbjct: 105 VIQDREVALDFIGNRGTTTGLNRERRLRYAQEILQKEMLPHISMKEGSESKKAYFFGYMI 164

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 165 HRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVEMHKEF 224

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K + IT GLK+ LATGNW   +K+
Sbjct: 225 NL-ALAVKHNTITNGLKYSLATGNWGDQKKS 254

[202][TOP]
>UniRef100_A2QYC2 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
           RepID=A2QYC2_ASPNC
          Length = 1256

 Score =  163 bits (413), Expect = 5e-39
 Identities = 78/152 (51%), Positives = 113/152 (74%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVA-VTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++ + +   +R++YA++I+ KEFLPH+   E +E RK FF GY+
Sbjct: 342 VIQDREVALDFIAKRGSSQSSMNHERRVRYAREIMQKEFLPHISQSEGSETRKAFFLGYM 401

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +HRLL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+T++ +  +QR ++  +E
Sbjct: 402 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNRE 461

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           + L+ G IK+  +T GLK+ LATGNW   +KA
Sbjct: 462 IYLNIG-IKASTLTGGLKYALATGNWGEQKKA 492

[203][TOP]
>UniRef100_Q6RYG1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Xanthoria polycarpa
           RepID=Q6RYG1_9LECA
          Length = 893

 Score =  163 bits (412), Expect = 6e-39
 Identities = 75/151 (49%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           +IQ ++VALD++GKRG    ++R +RI++A+D+L KE LPH+   E +E RK FF GY+I
Sbjct: 109 LIQDREVALDFLGKRGKNQKMSRNERIKFARDVLQKELLPHISQTEGSETRKAFFLGYMI 168

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HR+L+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F+++TK+    +Q+ +++ +E 
Sbjct: 169 HRMLQCALGRRDVDDRDHFGKKRLDLAGPLLAGLFRMLFQKLTKDIYKYLQKCVESNREF 228

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L  G +K + ++ GLK+ LATGNW   +KA
Sbjct: 229 NLALG-VKQNTLSSGLKYSLATGNWGDQKKA 258

[204][TOP]
>UniRef100_C4JKI6 DNA-directed RNA polymerase II 138 kDa polypeptide n=1
           Tax=Uncinocarpus reesii 1704 RepID=C4JKI6_UNCRE
          Length = 884

 Score =  163 bits (412), Expect = 6e-39
 Identities = 78/152 (51%), Positives = 111/152 (73%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++  ++   KR++YA+DI+ KEFLPH+   E +E RK FF GY+
Sbjct: 344 VIQDREVALDFISKRGSSPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 403

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +H+LL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+TK+    +QR ++  ++
Sbjct: 404 VHKLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETNRQ 463

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           + L  G +K+  +T GLK+ LATGNW   +KA
Sbjct: 464 LYLKIG-VKASTLTGGLKYALATGNWGEQKKA 494

[205][TOP]
>UniRef100_Q9UV97 DNA-directed RNA polymerase (Fragment) n=1 Tax=Chaetomium elatum
           RepID=Q9UV97_9PEZI
          Length = 934

 Score =  162 bits (411), Expect = 8e-39
 Identities = 82/151 (54%), Positives = 103/151 (68%), Gaps = 1/151 (0%)
 Frame = +1

Query: 4   IQSQDVALDYIGKRGN-TVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           IQ +++ALD+IGKRGN      R  R++ AKD+L KE LPH+   E  E RK FF GY++
Sbjct: 121 IQDREIALDFIGKRGNGNAGQNRMNRVRAAKDLLQKEMLPHISQTEGCETRKAFFLGYMV 180

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR   RRMT++    M+R +D  K  
Sbjct: 181 HRLLQCALGRRDPDDRDHFGKKRLDLAGPLLAKLFRNVIRRMTQDLMSYMKRCIDTNKNF 240

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           SL  G IK   +T GLK+ LATGNW   +KA
Sbjct: 241 SLALG-IKHSTLTNGLKYSLATGNWGDQKKA 270

[206][TOP]
>UniRef100_Q5U7W2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Climacodon
           septentrionalis RepID=Q5U7W2_9HOMO
          Length = 886

 Score =  162 bits (411), Expect = 8e-39
 Identities = 77/150 (51%), Positives = 107/150 (71%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ +++ALD+IG RG T  + R +R++YA++IL KE LPH+ + E +E +K +FFGY I
Sbjct: 101 VIQDREIALDFIGNRGTTTGLNRERRLRYAQEILQKEMLPHISMAEGSESKKAYFFGYRI 160

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 161 HRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 220

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRK 450
           +L    +K + IT GLK+ LATGNW   +K
Sbjct: 221 NLSLA-VKHNTITNGLKYSLATGNWGDQKK 249

[207][TOP]
>UniRef100_Q5C8E1 RNA polymerase II subunit (Fragment) n=1 Tax=Cercophora macrocarpa
           RepID=Q5C8E1_9PEZI
          Length = 595

 Score =  162 bits (411), Expect = 8e-39
 Identities = 84/152 (55%), Positives = 106/152 (69%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGN-TVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+IGKRGN      R+ RI+ AKD+L KE LPH+   E  E RK FF GY+
Sbjct: 118 VIQDREVALDFIGKRGNGNAGQNRSNRIRAAKDLLQKEMLPHISQTEGCETRKAFFLGYM 177

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +H+LL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR   RRMT++    M+R +D  K+
Sbjct: 178 VHKLLQCALGRRDTDDRDHFGKKRLDLAGPLLAKLFRGVVRRMTQDLMSYMKRCIDTNKQ 237

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
            SL  G IKS  +T  LK+ LATGNW   +KA
Sbjct: 238 FSLALG-IKSCTLTNALKYSLATGNWGDQKKA 268

[208][TOP]
>UniRef100_C5JQR0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis
           SLH14081 RepID=C5JQR0_AJEDS
          Length = 1258

 Score =  162 bits (411), Expect = 8e-39
 Identities = 78/152 (51%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++  ++   KR++YA+DI+ KEFLPH+   E +E RK FF GY+
Sbjct: 344 VIQDREVALDFISKRGSSPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 403

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +HRLL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+TK+    +QR ++  ++
Sbjct: 404 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRILFMRVTKDLYKYVQRCVETNRQ 463

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           + L+ G +K+  ++ GLK+ LATGNW   +KA
Sbjct: 464 LYLNIG-VKASTLSGGLKYALATGNWGEQKKA 494

[209][TOP]
>UniRef100_C5GBN2 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3
           RepID=C5GBN2_AJEDR
          Length = 1258

 Score =  162 bits (411), Expect = 8e-39
 Identities = 78/152 (51%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++  ++   KR++YA+DI+ KEFLPH+   E +E RK FF GY+
Sbjct: 344 VIQDREVALDFISKRGSSPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 403

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +HRLL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+TK+    +QR ++  ++
Sbjct: 404 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRILFMRVTKDLYKYVQRCVETNRQ 463

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           + L+ G +K+  ++ GLK+ LATGNW   +KA
Sbjct: 464 LYLNIG-VKASTLSGGLKYALATGNWGEQKKA 494

[210][TOP]
>UniRef100_C4QZQ7 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
           RepID=C4QZQ7_PICPG
          Length = 1227

 Score =  162 bits (411), Expect = 8e-39
 Identities = 83/152 (54%), Positives = 110/152 (72%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+IG+RG+  + + R KRIQYAKDIL KE LPH+   E  E RK FF GY+
Sbjct: 315 VIQDKEVALDFIGRRGSAALGIRREKRIQYAKDILQKELLPHITQEEGFETRKTFFLGYM 374

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           ++RLL  AL R+ +DDRDH+G KR+DLAGPLLA LFR  FR++T+E    MQR ++  ++
Sbjct: 375 VNRLLLCALERKDQDDRDHFGKKRLDLAGPLLANLFRILFRKLTREIYRYMQRCIETDRD 434

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
            +L+   +KS  IT GLK+ LATGNW   +KA
Sbjct: 435 FNLNLA-VKSTTITSGLKYSLATGNWGEQKKA 465

[211][TOP]
>UniRef100_C1H7W3 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
           Pb01 RepID=C1H7W3_PARBA
          Length = 1258

 Score =  162 bits (411), Expect = 8e-39
 Identities = 78/152 (51%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++  ++   KR++YA+DI+ KEFLPH+   E +E RK FF GY+
Sbjct: 344 VIQDREVALDFISKRGSSPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 403

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +HRLL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+TK+    +QR ++  ++
Sbjct: 404 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRILFMRVTKDLYKYVQRCVETNRQ 463

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           + L+ G +K+  ++ GLK+ LATGNW   +KA
Sbjct: 464 LYLNIG-VKASTLSGGLKYALATGNWGEQKKA 494

[212][TOP]
>UniRef100_C0S0L5 DNA-directed RNA polymerase n=2 Tax=Paracoccidioides brasiliensis
           RepID=C0S0L5_PARBP
          Length = 1258

 Score =  162 bits (411), Expect = 8e-39
 Identities = 78/152 (51%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++  ++   KR++YA+DI+ KEFLPH+   E +E RK FF GY+
Sbjct: 344 VIQDREVALDFISKRGSSPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 403

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +HRLL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+TK+    +QR ++  ++
Sbjct: 404 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRILFMRVTKDLYKYVQRCVETNRQ 463

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           + L+ G +K+  ++ GLK+ LATGNW   +KA
Sbjct: 464 LYLNIG-VKASTLSGGLKYALATGNWGEQKKA 494

[213][TOP]
>UniRef100_C0NB61 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
           RepID=C0NB61_AJECG
          Length = 1307

 Score =  162 bits (411), Expect = 8e-39
 Identities = 78/152 (51%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++  ++   KR++YA+DI+ KEFLPH+   E +E RK FF GY+
Sbjct: 446 VIQDREVALDFISKRGSSPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 505

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +HRLL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+TK+    +QR ++  ++
Sbjct: 506 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRILFMRVTKDLYKYVQRCVETNRQ 565

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           + L+ G +K+  ++ GLK+ LATGNW   +KA
Sbjct: 566 LYLNIG-VKASTLSGGLKYALATGNWGEQKKA 596

[214][TOP]
>UniRef100_A6R483 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
            RepID=A6R483_AJECN
          Length = 1743

 Score =  162 bits (411), Expect = 8e-39
 Identities = 78/152 (51%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1    VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
            VIQ ++VALD+I KRG++  ++   KR++YA+DI+ KEFLPH+   E +E RK FF GY+
Sbjct: 829  VIQDREVALDFISKRGSSPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 888

Query: 178  IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
            +HRLL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+TK+    +QR ++  ++
Sbjct: 889  VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRILFMRVTKDLYKYVQRCVETNRQ 948

Query: 358  VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
            + L+ G +K+  ++ GLK+ LATGNW   +KA
Sbjct: 949  LYLNIG-VKASTLSGGLKYALATGNWGEQKKA 979

[215][TOP]
>UniRef100_Q6QJD4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cortinarius iodes
           RepID=Q6QJD4_CORIO
          Length = 878

 Score =  162 bits (410), Expect = 1e-38
 Identities = 79/151 (52%), Positives = 108/151 (71%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  ++R +RI+YA++IL KE LPHV + E +E +K  FFGY+I
Sbjct: 106 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVAMKEGSEYQKAHFFGYMI 165

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH+G KR+DLAGPLL+ LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 166 HRLLLAALERRELDDRDHFGKKRLDLAGPLLSNLFRMLFRKLTKDVYRYLQKCVETHKEF 225

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K   IT GLK+ LATGNW   +K+
Sbjct: 226 NL-ALAVKHQTITNGLKYSLATGNWGDQKKS 255

[216][TOP]
>UniRef100_Q207G8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeolus
           schweinitzii RepID=Q207G8_9HOMO
          Length = 887

 Score =  162 bits (410), Expect = 1e-38
 Identities = 74/150 (49%), Positives = 109/150 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  + R +R++YA++IL KE LPH+ + E +E +K +FFGY++
Sbjct: 97  VIQDREVALDFIGNRGTTTGLNRERRLRYAQEILQKEMLPHISMAEGSESKKAYFFGYMV 156

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  A+ R+  DDRDH+G KR+DLAGPLL+ LFR  FR++TK+    +Q+ ++  KE 
Sbjct: 157 HRLLLAAMEREDLDDRDHFGKKRLDLAGPLLSNLFRMLFRKLTKDVYRYLQKCVETHKEF 216

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRK 450
           +L+   +K + IT GLK+ LATGNW   ++
Sbjct: 217 NLNLA-VKHNTITNGLKYSLATGNWGDQKR 245

[217][TOP]
>UniRef100_Q5C8E5 RNA polymerase II subunit (Fragment) n=1 Tax=Cercophora
           atropurpurea RepID=Q5C8E5_9PEZI
          Length = 595

 Score =  162 bits (409), Expect = 1e-38
 Identities = 82/152 (53%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGN-TVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALDYIGKRGN  +   R  RI+ AKD+L KE LPH+   E  E RK FF GY+
Sbjct: 118 VIQDREVALDYIGKRGNGNMGQNRVNRIRAAKDLLQKEMLPHISQSEGCETRKAFFLGYM 177

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +H+LL+  LGR+  DDRDH+G KR+DLAGPLLA LFR   RR+T++    M+R +D  K+
Sbjct: 178 VHKLLQCVLGRRDTDDRDHFGKKRLDLAGPLLAKLFRGIIRRVTQDLMSYMKRCIDGNKQ 237

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
            SL  G IK+  +T  LK+ LATGNW   +KA
Sbjct: 238 FSLALG-IKAGTLTNALKYSLATGNWGDQKKA 268

[218][TOP]
>UniRef100_Q27T04 DNA-directed RNA polymerase (Fragment) n=1 Tax=Vuilleminia comedens
           RepID=Q27T04_9HOMO
          Length = 880

 Score =  162 bits (409), Expect = 1e-38
 Identities = 75/150 (50%), Positives = 107/150 (71%)
 Frame = +1

Query: 4   IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
           +Q ++V LDYIG RG T  ++R +R+ YA++IL KE LPHV + E +E +K +FFGY+IH
Sbjct: 112 VQDREVCLDYIGNRGTTTGLSRERRLXYAQEILQKEMLPHVSMAEGSESKKAYFFGYMIH 171

Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
           RLL  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++T++    +Q+ ++  KE +
Sbjct: 172 RLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTRDVYRYLQKCVETSKEFN 231

Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +    +K + IT GLK+ LATGNW   +K+
Sbjct: 232 ISLA-VKHNTITNGLKYSLATGNWGDQKKS 260

[219][TOP]
>UniRef100_Q207H0 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Irpex
           lacteus RepID=Q207H0_IRPLA
          Length = 548

 Score =  162 bits (409), Expect = 1e-38
 Identities = 76/151 (50%), Positives = 108/151 (71%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  + R +R++YA++IL KE LPH+ + E  E +K +FFGY+I
Sbjct: 98  VIQDREVALDFIGNRGTTTGLNRERRLRYAQEILQKEMLPHISMAEGAESKKAYFFGYMI 157

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRL+  AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++T++    +Q+ ++  KE 
Sbjct: 158 HRLMLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTRDVYRYLQKCVETHKEF 217

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K + IT GLK+ LATGNW   +K+
Sbjct: 218 NLSLA-VKHNTITNGLKYSLATGNWGDQKKS 247

[220][TOP]
>UniRef100_B8MU25 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC
           10500 RepID=B8MU25_TALSN
          Length = 1256

 Score =  162 bits (409), Expect = 1e-38
 Identities = 77/152 (50%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++  +++  +R++YA++I+ KEFLPH+   E +E RK FF GY+
Sbjct: 342 VIQDREVALDFISKRGSSQTSMSHDRRVRYAREIMQKEFLPHISQSEGSETRKAFFLGYM 401

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +H+LL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+T++    +QR ++  +E
Sbjct: 402 VHKLLQCALGRRDVDDRDHFGKKRLDLAGPLLATLFRTLFTRVTRDLTRYVQRCVETNRE 461

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           V L+ G +K   +T GLK+ LATGNW   +KA
Sbjct: 462 VVLNVG-LKPATLTGGLKYALATGNWGEQKKA 492

[221][TOP]
>UniRef100_B6QUV1 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC
           18224 RepID=B6QUV1_PENMQ
          Length = 1254

 Score =  162 bits (409), Expect = 1e-38
 Identities = 77/152 (50%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++  +++  +R++YA++I+ KEFLPH+   E +E RK FF GY+
Sbjct: 340 VIQDREVALDFISKRGSSQTSMSHDRRVRYAREIMQKEFLPHISQSEGSETRKAFFLGYM 399

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +H+LL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+T++    +QR ++  +E
Sbjct: 400 VHKLLQCALGRRDVDDRDHFGKKRLDLAGPLLATLFRTLFTRVTRDLTRYVQRCVETNRE 459

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           V L+ G +K   +T GLK+ LATGNW   +KA
Sbjct: 460 VVLNVG-LKPATLTGGLKYALATGNWGEQKKA 490

[222][TOP]
>UniRef100_A1YID9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Entophlyctis
           confervae-glomeratae RepID=A1YID9_9FUNG
          Length = 886

 Score =  162 bits (409), Expect = 1e-38
 Identities = 80/150 (53%), Positives = 107/150 (71%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG  + V++ KRI+YA DIL KE LPHV +   ++ RK FFFGY+I
Sbjct: 119 VIQDKEVALDFIGVRGTQMGVSKDKRIRYATDILTKEMLPHVSMESHHQTRKAFFFGYMI 178

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+P DDRDH+G KR+DLAGPLL+ LFR  FR++T +     ++ ++ G E 
Sbjct: 179 HRLLLAALERRPLDDRDHFGRKRLDLAGPLLSSLFRTLFRKLTTDVSRYTKKIVETGGEF 238

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRK 450
           +L    +KS  ITKGL++ LATGNW   +K
Sbjct: 239 NL-AMALKSATITKGLQYSLATGNWGDQKK 267

[223][TOP]
>UniRef100_A1YID6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces macrogynus
           RepID=A1YID6_ALLMA
          Length = 896

 Score =  162 bits (409), Expect = 1e-38
 Identities = 76/149 (51%), Positives = 106/149 (71%)
 Frame = +1

Query: 4   IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
           IQ ++VALD+IGKRG  + +TR KRI+YA D+L +E LPH+G+    + RK +F GY++H
Sbjct: 112 IQEREVALDFIGKRGRNIGLTRDKRIRYAHDLLERELLPHIGITPGCQTRKSYFIGYMVH 171

Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
           RLL  ALGR+  DDRDH+G KR+DLAGPLLA LFR  F+++TK+        ++ G+E +
Sbjct: 172 RLLLAALGRRQVDDRDHFGKKRLDLAGPLLASLFRTFFQKLTKDVSRYFTVCIERGREFN 231

Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDRK 450
           L+   I S+ IT GL++ LATGNW   +K
Sbjct: 232 LNMA-INSNTITNGLRYALATGNWGDQKK 259

[224][TOP]
>UniRef100_A1YID5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces macrogynus
           RepID=A1YID5_ALLMA
          Length = 867

 Score =  161 bits (408), Expect = 2e-38
 Identities = 75/149 (50%), Positives = 106/149 (71%)
 Frame = +1

Query: 4   IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
           IQ +++ALD+IGKRG  + +TR KRI+YA D+L +E LPH+G+    + RK +F GY++H
Sbjct: 112 IQEREIALDFIGKRGRNIGLTRDKRIRYAHDLLERELLPHIGITPGCQTRKSYFIGYMVH 171

Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
           RLL  ALGR+  DDRDH+G KR+DLAGPLLA LFR  F+++TK+        ++ G+E +
Sbjct: 172 RLLLAALGRRQVDDRDHFGKKRLDLAGPLLASLFRTFFQKLTKDVSRYFTVCIERGREFN 231

Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDRK 450
           L+   I S+ IT GL++ LATGNW   +K
Sbjct: 232 LNMA-INSNTITNGLRYALATGNWGDQKK 259

[225][TOP]
>UniRef100_Q6FLD5 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Candida
           glabrata RepID=RPB2_CANGA
          Length = 1223

 Score =  161 bits (408), Expect = 2e-38
 Identities = 80/151 (52%), Positives = 106/151 (70%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++ ALD+IG+RG  + + + KRIQYAKDIL KEFLPH+   E  E RK FF GY+I
Sbjct: 321 VIQDRETALDFIGRRGTALGIKKEKRIQYAKDILQKEFLPHITQLEGFESRKAFFLGYMI 380

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           +RLL  AL R+ +DDRDH+G KR+DLAGPLLA LF+  FR++TK+    MQR ++   + 
Sbjct: 381 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTKDIFRYMQRTVEEANDF 440

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           ++    I +  IT GLK+ LATGNW   +KA
Sbjct: 441 NMKLA-INAKTITSGLKYALATGNWGEQKKA 470

[226][TOP]
>UniRef100_C5LU72 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
           RepID=C5LU72_9ALVE
          Length = 1171

 Score =  161 bits (407), Expect = 2e-38
 Identities = 75/148 (50%), Positives = 106/148 (71%)
 Frame = +1

Query: 4   IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
           I SQ+VALD+I KRG T+  +++ RIQYAK++L KE LPH+GV +  E RK +F GY++H
Sbjct: 298 IMSQEVALDFIAKRGPTIGTSKSGRIQYAKELLQKELLPHLGVKQYCEPRKAYFIGYMVH 357

Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
           RLL   LGR  EDDRDH+G KR+D+AGPL+A  F Q FR++ +++K  +QR +D+G+   
Sbjct: 358 RLLLGQLGRIAEDDRDHFGKKRMDMAGPLMAASFAQLFRKLVQDSKRILQRQVDSGRHFD 417

Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDR 447
           L+     +  IT GL++ LATGNW  D+
Sbjct: 418 LNSAIRSASSITDGLRYQLATGNWGIDK 445

[227][TOP]
>UniRef100_Q873S8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Stereum hirsutum
           RepID=Q873S8_9HOMO
          Length = 801

 Score =  161 bits (407), Expect = 2e-38
 Identities = 73/151 (48%), Positives = 110/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ +++ALD+IG RG T  ++R +R++YA++IL KE LPH+ + E +E +K +FFGY+I
Sbjct: 91  VIQDREIALDFIGNRGTTTGLSRERRLRYAQEILQKEMLPHISMSEGSESKKAYFFGYMI 150

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL   + R+  DDRDH+G KR+DLAGPLLA LFR  FR++T++    +Q+ ++  K+ 
Sbjct: 151 HRLLLAGMERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTRDVYRYLQKCVETHKDF 210

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L+   +K + IT GLK+ LATGNW   +K+
Sbjct: 211 NLNLA-VKHNTITNGLKYSLATGNWGDQKKS 240

[228][TOP]
>UniRef100_Q6QF59 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Heterobasidion annosum RepID=Q6QF59_HETAN
          Length = 515

 Score =  161 bits (407), Expect = 2e-38
 Identities = 74/151 (49%), Positives = 110/151 (72%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  ++R +R++YA++IL KE LPH+ + E +E +K +FFGY+I
Sbjct: 89  VIQDREVALDFIGNRGTTTGLSRDRRVRYAQEILQKEMLPHISMSEGSESKKAYFFGYMI 148

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRL+  A+ R+  DDRDH+G KR+DLAGPLLA LFR  FR++T++    +Q+ ++  K+ 
Sbjct: 149 HRLVLAAMERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTRDVYRYLQKCVETHKDF 208

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K + IT GLK+ LATGNW   +K+
Sbjct: 209 NLXLA-VKHNTITNGLKYSLATGNWGDQKKS 238

[229][TOP]
>UniRef100_Q5ARG0 DNA-directed RNA polymerase n=1 Tax=Emericella nidulans
           RepID=Q5ARG0_EMENI
          Length = 1028

 Score =  161 bits (407), Expect = 2e-38
 Identities = 75/152 (49%), Positives = 114/152 (75%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVA-VTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++ + +   +R++YA++I+ KE LPH+   E +E RK FF GY+
Sbjct: 116 VIQDREVALDFIAKRGSSQSSMNHERRVRYAREIMQKELLPHISQSEGSETRKAFFLGYM 175

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +HRLL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+T++ +  +QR +++ +E
Sbjct: 176 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVESDRE 235

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           + L+ G +K+  +T+GL++ LATGNW   +KA
Sbjct: 236 IYLNVG-LKASTVTQGLRYALATGNWGEQKKA 266

[230][TOP]
>UniRef100_Q0CWW4 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
           RepID=Q0CWW4_ASPTN
          Length = 1256

 Score =  161 bits (407), Expect = 2e-38
 Identities = 77/152 (50%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVA-VTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++ + +   +R++YA++I+ KE LPH+   E +E RK FF GY+
Sbjct: 342 VIQDREVALDFIAKRGSSQSSMNHERRVRYAREIMQKELLPHISQSEGSETRKAFFLGYM 401

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +HRLL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+T++ +  +QR ++  +E
Sbjct: 402 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNRE 461

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           + L+ G IK+  +T GLK+ LATGNW   +KA
Sbjct: 462 IYLNIG-IKASTLTGGLKYALATGNWGEQKKA 492

[231][TOP]
>UniRef100_C8VK81 DNA-directed RNA polymerase (EC 2.7.7.6)
           [Source:UniProtKB/TrEMBL;Acc:Q9UV95] n=2 Tax=Emericella
           nidulans RepID=C8VK81_EMENI
          Length = 1252

 Score =  161 bits (407), Expect = 2e-38
 Identities = 75/152 (49%), Positives = 114/152 (75%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVA-VTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++ + +   +R++YA++I+ KE LPH+   E +E RK FF GY+
Sbjct: 340 VIQDREVALDFIAKRGSSQSSMNHERRVRYAREIMQKELLPHISQSEGSETRKAFFLGYM 399

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +HRLL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+T++ +  +QR +++ +E
Sbjct: 400 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVESDRE 459

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           + L+ G +K+  +T+GL++ LATGNW   +KA
Sbjct: 460 IYLNVG-LKASTVTQGLRYALATGNWGEQKKA 490

[232][TOP]
>UniRef100_C5DW43 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS
           732 RepID=C5DW43_ZYGRC
          Length = 1224

 Score =  161 bits (407), Expect = 2e-38
 Identities = 79/151 (52%), Positives = 107/151 (70%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++ ALD+IG+RG  + + + KRIQYA+DIL KEFLPH+   E  E RK FF GY+I
Sbjct: 323 VIQDRETALDFIGRRGTALGIKKEKRIQYARDILQKEFLPHITQLEGFESRKAFFLGYMI 382

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           +RLL  AL R+ +DDRDH+G KR+DLAGPLLA LF+  FR++T++    MQR ++  K+ 
Sbjct: 383 NRLLLCALDRRDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTRDIFRYMQRTVEEAKDF 442

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           ++    I +  IT GLK+ LATGNW   +KA
Sbjct: 443 NMKLA-INAKTITSGLKYALATGNWGEQKKA 472

[233][TOP]
>UniRef100_B8NK59 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=B8NK59_ASPFN
          Length = 1254

 Score =  161 bits (407), Expect = 2e-38
 Identities = 77/152 (50%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVA-VTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++ + +   +R++YA++I+ KE LPH+   E +E RK FF GY+
Sbjct: 341 VIQDREVALDFIAKRGSSQSSMNHERRVRYAREIMQKELLPHISQSEGSETRKAFFLGYM 400

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +HRLL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+T++ +  +QR ++  +E
Sbjct: 401 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNRE 460

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           + L+ G IK+  +T GLK+ LATGNW   +KA
Sbjct: 461 IYLNIG-IKASTLTGGLKYALATGNWGEQKKA 491

[234][TOP]
>UniRef100_B0YC08 DNA-directed RNA polymerase n=3 Tax=Aspergillus fumigatus
           RepID=B0YC08_ASPFC
          Length = 1255

 Score =  161 bits (407), Expect = 2e-38
 Identities = 77/152 (50%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVA-VTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++ + +   +R++YA++I+ KE LPH+   E +E RK FF GY+
Sbjct: 343 VIQDREVALDFIAKRGSSQSSMNHERRVRYAREIMQKELLPHISQSEGSETRKAFFLGYM 402

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +HRLL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+T++ +  +QR ++  +E
Sbjct: 403 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNRE 462

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           + L+ G IK+  +T GLK+ LATGNW   +KA
Sbjct: 463 IYLNIG-IKASTLTGGLKYALATGNWGEQKKA 493

[235][TOP]
>UniRef100_A1D971 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
           RepID=A1D971_NEOFI
          Length = 1255

 Score =  161 bits (407), Expect = 2e-38
 Identities = 77/152 (50%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVA-VTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++ + +   +R++YA++I+ KE LPH+   E +E RK FF GY+
Sbjct: 343 VIQDREVALDFIAKRGSSQSSMNHERRVRYAREIMQKELLPHISQSEGSETRKAFFLGYM 402

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +HRLL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+T++ +  +QR ++  +E
Sbjct: 403 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNRE 462

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           + L+ G IK+  +T GLK+ LATGNW   +KA
Sbjct: 463 IYLNIG-IKASTLTGGLKYALATGNWGEQKKA 493

[236][TOP]
>UniRef100_A1CG49 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
           RepID=A1CG49_ASPCL
          Length = 1257

 Score =  161 bits (407), Expect = 2e-38
 Identities = 77/152 (50%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVA-VTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
           VIQ ++VALD+I KRG++ + +   +R++YA++I+ KE LPH+   E +E RK FF GY+
Sbjct: 343 VIQDREVALDFIAKRGSSQSSMNHERRVRYAREIMQKELLPHISQSEGSETRKAFFLGYM 402

Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
           +HRLL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR  F R+T++ +  +QR ++  +E
Sbjct: 403 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNRE 462

Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           + L+ G IK+  +T GLK+ LATGNW   +KA
Sbjct: 463 IYLNIG-IKASTLTGGLKYALATGNWGEQKKA 493

[237][TOP]
>UniRef100_Q5C8C0 RNA polymerase II subunit (Fragment) n=1 Tax=Neurospora pannonica
           RepID=Q5C8C0_9PEZI
          Length = 597

 Score =  160 bits (406), Expect = 3e-38
 Identities = 82/151 (54%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
 Frame = +1

Query: 4   IQSQDVALDYIGKRGN-TVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           IQ ++VALDYIGKRGN    V R  RI+ AK++L KE LPH+   E  E RK FF GY++
Sbjct: 119 IQDREVALDYIGKRGNGNTGVNRNSRIKAAKEMLQKELLPHISQAEGCETRKAFFLGYMV 178

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           H+LL+  LGR+  DDRDH+G KR+DLAGPLLA LFR   RR+T++    M+R +D  K  
Sbjct: 179 HKLLQCVLGRRDTDDRDHFGKKRLDLAGPLLAKLFRGIVRRLTQDLMGYMKRCVDTNKHF 238

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           SL  G IK+  +T GLK+ LATGNW   +KA
Sbjct: 239 SLALG-IKASTLTNGLKYSLATGNWGDQKKA 268

[238][TOP]
>UniRef100_Q2GU47 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
           RepID=Q2GU47_CHAGB
          Length = 1182

 Score =  160 bits (406), Expect = 3e-38
 Identities = 81/151 (53%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
 Frame = +1

Query: 4   IQSQDVALDYIGKRGN-TVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           IQ +++ALD+IGKRGN      R  R++ AKD+L KE LPH+   E  E RK FF GY++
Sbjct: 307 IQDREIALDFIGKRGNGNAGQNRMNRVRAAKDLLQKEMLPHISQTEGCETRKAFFLGYMV 366

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL+ ALGR+  DDRDH+G KR+DL GPLLA LFR   RRMT++    M+R +D  K  
Sbjct: 367 HRLLQCALGRRDPDDRDHFGKKRLDLPGPLLAKLFRNVIRRMTQDLMSYMKRCIDTNKNF 426

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           SL  G IK   +T GLK+ LATGNW   +KA
Sbjct: 427 SLPLG-IKHSTLTNGLKYSLATGNWGDQKKA 456

[239][TOP]
>UniRef100_B6RQS5 RNA polymerase II subunit 2 (Fragment) n=1 Tax=Agaricus sp. JB-101
           RepID=B6RQS5_9AGAR
          Length = 410

 Score =  160 bits (406), Expect = 3e-38
 Identities = 77/147 (52%), Positives = 106/147 (72%)
 Frame = +1

Query: 13  QDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIHRLL 192
           ++VALD+IG RG T  ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+IHRLL
Sbjct: 1   REVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMIHRLL 60

Query: 193 RVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVSLHG 372
             AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE +L  
Sbjct: 61  LAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEFNL-A 119

Query: 373 GHIKSDVITKGLKFPLATGNWSSDRKA 453
             +K   IT GLK+ LATGNW   +K+
Sbjct: 120 LAVKHQTITNGLKYSLATGNWGDQKKS 146

[240][TOP]
>UniRef100_B6RQS4 RNA polymerase II subunit 2 (Fragment) n=1 Tax=Agaricus sp. JB-101
           RepID=B6RQS4_9AGAR
          Length = 368

 Score =  160 bits (406), Expect = 3e-38
 Identities = 77/147 (52%), Positives = 106/147 (72%)
 Frame = +1

Query: 13  QDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIHRLL 192
           ++VALD+IG RG T  ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+IHRLL
Sbjct: 1   REVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMIHRLL 60

Query: 193 RVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVSLHG 372
             AL R+  DDRDH+G KR+DLAGPLLA LFR  FR++TK+    +Q+ ++  KE +L  
Sbjct: 61  LAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEFNL-A 119

Query: 373 GHIKSDVITKGLKFPLATGNWSSDRKA 453
             +K   IT GLK+ LATGNW   +K+
Sbjct: 120 LAVKHQTITNGLKYSLATGNWGDQKKS 146

[241][TOP]
>UniRef100_Q5U7W5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Armillaria mellea
           RepID=Q5U7W5_ARMME
          Length = 884

 Score =  160 bits (405), Expect = 4e-38
 Identities = 77/151 (50%), Positives = 106/151 (70%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IG RG T  ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 111 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMSEGSESKKAYFFGYMI 170

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           HRLL  AL R+  DDRDH G  R+DLAGPLLA LFR  FR+  ++    +Q+ ++  KE 
Sbjct: 171 HRLLLAALERRELDDRDHLGKNRLDLAGPLLANLFRMLFRKFNRDVYRYLQKCVETHKEF 230

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           ++  G +K   IT GLK+ LATGNW   +K+
Sbjct: 231 NVSVG-VKHQTITNGLKYSLATGNWGDQKKS 260

[242][TOP]
>UniRef100_Q9UV99 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neurospora crassa
           RepID=Q9UV99_NEUCR
          Length = 903

 Score =  160 bits (404), Expect = 5e-38
 Identities = 81/151 (53%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
 Frame = +1

Query: 4   IQSQDVALDYIGKRGN-TVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           IQ ++VALDYIGKRGN +  + R  RI+ AK++L KE LPH+   E  E RK FF GY++
Sbjct: 121 IQDREVALDYIGKRGNGSTGINRNGRIKAAKEMLQKELLPHISQAEGCETRKAFFLGYMV 180

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           H+LL+  LGR+  DDRDH+G KR+DLAGPLLA LFR   RR+T++    M+R +D  K  
Sbjct: 181 HKLLQCVLGRRDTDDRDHFGKKRLDLAGPLLAKLFRGIVRRLTQDLMGYMKRCVDTNKHF 240

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           SL  G IK+  +T GLK+ LATGNW   +KA
Sbjct: 241 SLALG-IKASTLTNGLKYSLATGNWGDQKKA 270

[243][TOP]
>UniRef100_Q9UV88 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dothidea insculpta
           RepID=Q9UV88_9PEZI
          Length = 936

 Score =  160 bits (404), Expect = 5e-38
 Identities = 76/151 (50%), Positives = 112/151 (74%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++VALD+IGKRG  +  TR  RI+YA+D++ KEFLPH+   E +E RK FF GY+I
Sbjct: 119 VIQDREVALDFIGKRGQQMG-TREXRIRYARDVMQKEFLPHISQKEGSETRKAFFLGYMI 177

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           +RLL+ ALGR  EDDRDH+G KR+DLAGPL+A +FR  F ++ ++ ++ + R ++ GKE 
Sbjct: 178 NRLLQCALGRVEEDDRDHFGKKRLDLAGPLMAQVFRLKFTQLIRDTRVYLSRCVEGGKEF 237

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           +L    +K+++++ GL++ LATGNW   +KA
Sbjct: 238 NLTLA-VKANILSSGLRYCLATGNWGDQKKA 267

[244][TOP]
>UniRef100_Q872W7 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
           RepID=Q872W7_NEUCR
          Length = 1287

 Score =  160 bits (404), Expect = 5e-38
 Identities = 81/151 (53%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
 Frame = +1

Query: 4   IQSQDVALDYIGKRGN-TVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           IQ ++VALDYIGKRGN +  + R  RI+ AK++L KE LPH+   E  E RK FF GY++
Sbjct: 376 IQDREVALDYIGKRGNGSTGINRNGRIKAAKEMLQKELLPHISQAEGCETRKAFFLGYMV 435

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           H+LL+  LGR+  DDRDH+G KR+DLAGPLLA LFR   RR+T++    M+R +D  K  
Sbjct: 436 HKLLQCVLGRRDTDDRDHFGKKRLDLAGPLLAKLFRGIVRRLTQDLMGYMKRCVDTNKHF 495

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           SL  G IK+  +T GLK+ LATGNW   +KA
Sbjct: 496 SLALG-IKASTLTNGLKYSLATGNWGDQKKA 525

[245][TOP]
>UniRef100_Q7RYF4 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
           RepID=Q7RYF4_NEUCR
          Length = 1005

 Score =  160 bits (404), Expect = 5e-38
 Identities = 81/151 (53%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
 Frame = +1

Query: 4   IQSQDVALDYIGKRGN-TVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           IQ ++VALDYIGKRGN +  + R  RI+ AK++L KE LPH+   E  E RK FF GY++
Sbjct: 140 IQDREVALDYIGKRGNGSTGINRNGRIKAAKEMLQKELLPHISQAEGCETRKAFFLGYMV 199

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           H+LL+  LGR+  DDRDH+G KR+DLAGPLLA LFR   RR+T++    M+R +D  K  
Sbjct: 200 HKLLQCVLGRRDTDDRDHFGKKRLDLAGPLLAKLFRGIVRRLTQDLMGYMKRCVDTNKHF 259

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           SL  G IK+  +T GLK+ LATGNW   +KA
Sbjct: 260 SLALG-IKASTLTNGLKYSLATGNWGDQKKA 289

[246][TOP]
>UniRef100_Q5C8D2 RNA polymerase II subunit (Fragment) n=1 Tax=Zignoella ovoidea
           RepID=Q5C8D2_9PEZI
          Length = 595

 Score =  160 bits (404), Expect = 5e-38
 Identities = 79/150 (52%), Positives = 104/150 (69%)
 Frame = +1

Query: 4   IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
           IQ ++VALD+IGKRGNT  + R  RI+ A+D+L KE LPH+   E  E RK FF GY++H
Sbjct: 119 IQDREVALDFIGKRGNTHGLARGNRIKAARDVLQKEMLPHISQSEGCETRKAFFLGYMVH 178

Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
           +LL+ ALGR+  DDRDH+G KR+DLAGPLLA LFR   R+MT + +  ++R ++  K  S
Sbjct: 179 KLLQCALGRRDTDDRDHFGKKRLDLAGPLLAKLFRGIVRKMTTDLQAYVKRCVNENKHFS 238

Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           L  G IK   +T  LK+ LATGNW   +KA
Sbjct: 239 LALG-IKPSQLTNALKYSLATGNWGDQKKA 267

[247][TOP]
>UniRef100_Q5C8C8 RNA polymerase II subunit (Fragment) n=1 Tax=Gelasinospora
           tetrasperma RepID=Q5C8C8_9PEZI
          Length = 590

 Score =  160 bits (404), Expect = 5e-38
 Identities = 82/151 (54%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
 Frame = +1

Query: 4   IQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           IQ ++VALDYIGKRGN    V R  RI+ AK++L KE LPH+   E  E RK FF GY++
Sbjct: 112 IQDREVALDYIGKRGNGHTGVNRNSRIKAAKEMLQKELLPHISQAEGCETRKAFFLGYMV 171

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           H+LL+  LGR+  DDRDH+G KR+DLAGPLLA LFR   RR+T++    M+R +D  K  
Sbjct: 172 HKLLQCVLGRRDTDDRDHFGKKRLDLAGPLLAKLFRGIVRRLTQDLMGYMKRCVDTNKHF 231

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           SL  G IK+  +T GLK+ LATGNW   +KA
Sbjct: 232 SLALG-IKASTLTNGLKYSLATGNWGDQKKA 261

[248][TOP]
>UniRef100_Q5C8C5 RNA polymerase II subunit (Fragment) n=1 Tax=Lasiosphaeria hispida
           RepID=Q5C8C5_9PEZI
          Length = 600

 Score =  160 bits (404), Expect = 5e-38
 Identities = 81/151 (53%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
 Frame = +1

Query: 4   IQSQDVALDYIGKRGN-TVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           IQ +++ALDYIGKRGN      R  RI+ AKD+L KE LPH+   E  E RK FF GY++
Sbjct: 119 IQDREIALDYIGKRGNGNTGQNRMNRIRAAKDLLQKEMLPHISQTEGCETRKAFFLGYMV 178

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           H+LL+  LGR+  DDRDH+G KR+DLAGPL+A LFR   RR+T+E    M+R +D  K  
Sbjct: 179 HKLLQCVLGRRDTDDRDHFGKKRLDLAGPLMAKLFRGLVRRITQELMQHMKRCIDGNKHF 238

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           SL  G IK   +T GLK+ LATGNW   +KA
Sbjct: 239 SLALG-IKPGTLTNGLKYSLATGNWGDQKKA 268

[249][TOP]
>UniRef100_Q207G1 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Gloeocystidiellum porosum RepID=Q207G1_9HOMO
          Length = 429

 Score =  160 bits (404), Expect = 5e-38
 Identities = 74/145 (51%), Positives = 108/145 (74%)
 Frame = +1

Query: 19  VALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIHRLLRV 198
           +ALD+IG RG TV ++R +R++YA++IL KE LPH+ + E +E +K +FFGY+IHRLL  
Sbjct: 1   IALDFIGNRGTTVGLSRERRLRYAQEILQKEMLPHISMSEGSESKKAYFFGYMIHRLLLA 60

Query: 199 ALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVSLHGGH 378
           A+ R+  DDRDH+G KR+DLAGPLLA LFR  FR++T++    +Q+ +++ KE +L+   
Sbjct: 61  AMERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTRDVYRYLQKCVESHKEFNLNLA- 119

Query: 379 IKSDVITKGLKFPLATGNWSSDRKA 453
           IK + IT GLK+ LATGNW   +K+
Sbjct: 120 IKHNTITNGLKYSLATGNWGDQKKS 144

[250][TOP]
>UniRef100_P08518 DNA-directed RNA polymerase II subunit RPB2 n=4 Tax=Saccharomyces
           cerevisiae RepID=RPB2_YEAST
          Length = 1224

 Score =  160 bits (404), Expect = 5e-38
 Identities = 79/151 (52%), Positives = 106/151 (70%)
 Frame = +1

Query: 1   VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
           VIQ ++ ALD+IG+RG  + + + KRIQYAKDIL KEFLPH+   E  E RK FF GY+I
Sbjct: 323 VIQDRETALDFIGRRGTALGIKKEKRIQYAKDILQKEFLPHITQLEGFESRKAFFLGYMI 382

Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
           +RLL  AL R+ +DDRDH+G KR+DLAGPLLA LF+  F+++TK+    MQR ++   + 
Sbjct: 383 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFKKLTKDIFRYMQRTVEEAHDF 442

Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
           ++    I +  IT GLK+ LATGNW   +KA
Sbjct: 443 NMKLA-INAKTITSGLKYALATGNWGEQKKA 472