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[1][TOP] >UniRef100_A9T079 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T079_PHYPA Length = 750 Score = 184 bits (466), Expect = 4e-45 Identities = 89/140 (63%), Positives = 107/140 (76%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 YFPYEF+YPEQY YMVDLKRTLDARGH +LEMPTGTGKT+TLLSLI SY L P + KL+ Sbjct: 11 YFPYEFIYPEQYDYMVDLKRTLDARGHCLLEMPTGTGKTITLLSLITSYMLANPSVGKLI 70 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 YCTRTV EM+KVL ELR++ A+++K + A K LA+GL++R+NLC+HP VS Sbjct: 71 YCTRTVHEMEKVLEELRKLQAYQEKALGKAA--------KMLALGLSSRKNLCIHPQVSG 122 Query: 362 ASSREEADALCRSMTASWAR 421 SRE DA CR +TASW R Sbjct: 123 EGSRESVDAGCRKLTASWVR 142 [2][TOP] >UniRef100_C1DZL6 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1DZL6_9CHLO Length = 797 Score = 172 bits (436), Expect = 1e-41 Identities = 81/140 (57%), Positives = 103/140 (73%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 YFPYE++YPEQY YM++LKR LDA+GH LEMPTGTGKT+T LSLI SYQL PE KL+ Sbjct: 11 YFPYEYLYPEQYRYMLELKRALDAKGHGCLEMPTGTGKTITCLSLITSYQLQNPECGKLI 70 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 YCTRTV EM+KVL ELR + A+R+K + + +A+GL++R+N+C+HP V+ Sbjct: 71 YCTRTVPEMEKVLAELRNLQAYREK--------HVGKASQIMALGLSSRKNMCIHPKVAD 122 Query: 362 ASSREEADALCRSMTASWAR 421 SRE DA CR +TASW R Sbjct: 123 EGSRESVDANCRRLTASWVR 142 [3][TOP] >UniRef100_C1MJ87 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MJ87_9CHLO Length = 741 Score = 169 bits (429), Expect = 7e-41 Identities = 83/140 (59%), Positives = 102/140 (72%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 YFPYE++YPEQY YM +LKR LDA+GH LEMPTGTGKT+T L+LI SYQL PE KL+ Sbjct: 11 YFPYEYLYPEQYKYMQELKRGLDAKGHGCLEMPTGTGKTITCLALITSYQLAHPECGKLI 70 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 YCTRTV EM+KVL ELR + A+R+K E A LA+GL++R+N+C+HP V+ Sbjct: 71 YCTRTVPEMEKVLAELRVLQAYREKHVGEAA--------AMLALGLSSRKNMCVHPRVAE 122 Query: 362 ASSREEADALCRSMTASWAR 421 SRE DA CR +TASW R Sbjct: 123 EGSRESVDARCRQLTASWVR 142 [4][TOP] >UniRef100_Q6AUI3 Os05g0144800 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6AUI3_ORYSJ Length = 758 Score = 157 bits (396), Expect = 5e-37 Identities = 79/141 (56%), Positives = 100/141 (70%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPEL-AKL 178 +FPY +YPEQ+AYM +LKR LDARGH++LEMPTGTGKT L+SLI SY L P +L Sbjct: 11 HFPYAAIYPEQHAYMGELKRALDARGHALLEMPTGTGKTSALISLITSYSLASPSRPLRL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YCTRTV EM+K L ELR + AH AAASR LA+GL++R+NLC+HP S Sbjct: 71 IYCTRTVHEMEKTLAELRLLFAH----------LPAAASRSLLALGLSSRKNLCVHPQAS 120 Query: 359 SASSREEADALCRSMTASWAR 421 +A++R+ D CR +TASW R Sbjct: 121 AAAARDSVDTACRRLTASWVR 141 [5][TOP] >UniRef100_A8PT04 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PT04_MALGO Length = 837 Score = 156 bits (395), Expect = 6e-37 Identities = 80/162 (49%), Positives = 107/162 (66%), Gaps = 16/162 (9%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQY+YMVDLKRTLD +GH +LEMP+GTGKTV+LLSLI+SYQ + P KLVY Sbjct: 12 FPYPKIYPEQYSYMVDLKRTLDVKGHGVLEMPSGTGKTVSLLSLIISYQRFYPGSRKLVY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAE------------DAPARAAASRKTLAVGLTTR 328 C+RTV E++K L EL+R++A+R K + D+ LA+GL++R Sbjct: 72 CSRTVSEIEKALAELKRLMAYRAKYNTKKQLSDGIEPMDVDSEDIQGQMEDILALGLSSR 131 Query: 329 RNLCLHPAVSSASSREEADALCRSMTASWA----RGDPEDIE 442 +N+C+HP VS + DA CR MT++WA R DP +E Sbjct: 132 KNMCVHPTVSQERKGKVVDARCRDMTSAWACEKGRQDPGSVE 173 [6][TOP] >UniRef100_B6UCC8 DNA repair helicase UVH6 n=1 Tax=Zea mays RepID=B6UCC8_MAIZE Length = 758 Score = 156 bits (394), Expect = 8e-37 Identities = 78/141 (55%), Positives = 99/141 (70%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRP-ELAKL 178 +FPY +YPEQ+AYM +LKR LDARGH++LEMPTGTGKT L+SLI SY L P +L Sbjct: 11 HFPYAAIYPEQHAYMGELKRALDARGHALLEMPTGTGKTAALISLITSYSLANPARPLRL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YCTRTV EM+K L ELR + AH AASR LA+GL++R+NLC+HP S Sbjct: 71 IYCTRTVHEMEKTLAELRLLFAH----------LPPAASRSLLALGLSSRKNLCIHPQAS 120 Query: 359 SASSREEADALCRSMTASWAR 421 +A++R+ D CR +TASW R Sbjct: 121 AAAARDSVDTACRRLTASWVR 141 [7][TOP] >UniRef100_B0CSE7 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0CSE7_LACBS Length = 759 Score = 155 bits (393), Expect = 1e-36 Identities = 77/150 (51%), Positives = 101/150 (67%), Gaps = 4/150 (2%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY+ +YPEQYAYM DLKRTLDA GH +LEMP+GTGKTV+LLSLI+SYQ + P KLVY Sbjct: 12 FPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQFYPTRRKLVY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RTV E++K L EL+R++A+R + P R + +GLT+R+NLC+HP +S Sbjct: 72 CSRTVPEIEKALAELKRLMAYR--ISHAETPEEKEKERSFMGMGLTSRKNLCIHPEISKE 129 Query: 365 SSREEADALCRSMT----ASWARGDPEDIE 442 DA CR +T R DP+ +E Sbjct: 130 KKGRVVDARCRDLTNAAVCEKGRADPDSVE 159 [8][TOP] >UniRef100_UPI00016E32B0 UPI00016E32B0 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E32B0 Length = 760 Score = 154 bits (390), Expect = 2e-36 Identities = 80/167 (47%), Positives = 114/167 (68%), Gaps = 13/167 (7%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRP-ELAKL 178 YFPY+++YPEQY+YM++LKRTLDA+GH +LEMP+GTGKT++LLSLI++YQ P E+ KL Sbjct: 11 YFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQKAFPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L + K + S LA+ L++R+NLC+HP VS Sbjct: 71 IYCSRTVPEIEKVVEELRKLLEYHAK--------QTGQSNNFLALALSSRKNLCIHPEVS 122 Query: 359 SASSREEADALCRSMTASWAR----GDP--------EDIEDVGGRAP 463 + +E D C S+TAS+ R DP ED + VG + P Sbjct: 123 ALRFGKEVDGKCHSLTASYIRAQRHSDPNVPVCRYFEDFDAVGRQVP 169 [9][TOP] >UniRef100_C5Z000 Putative uncharacterized protein Sb09g003450 n=1 Tax=Sorghum bicolor RepID=C5Z000_SORBI Length = 758 Score = 154 bits (389), Expect = 3e-36 Identities = 79/149 (53%), Positives = 101/149 (67%), Gaps = 5/149 (3%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPEL-AKL 178 +FPY +YPEQ+AYM +LKR LDARGH++LEMPTGTGKT L+SLI SY L P +L Sbjct: 11 HFPYAAIYPEQHAYMGELKRALDARGHALLEMPTGTGKTAALISLITSYSLANPSRPLRL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YCTRTV EM+K L ELR + AH A+R LA+GL++R+NLC+HP S Sbjct: 71 IYCTRTVHEMEKTLAELRLLFAH----------LPPPAARSLLALGLSSRKNLCVHPQAS 120 Query: 359 SASSREEADALCRSMTASWAR----GDPE 433 +A++R+ D CR +TASW R DPE Sbjct: 121 AAAARDSVDTACRRLTASWVREKAASDPE 149 [10][TOP] >UniRef100_B9GSP7 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GSP7_POPTR Length = 758 Score = 154 bits (389), Expect = 3e-36 Identities = 76/141 (53%), Positives = 102/141 (72%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELA-KL 178 YFPY+ +YPEQY+YMV+LKR LDA+GH +LEMPTGTGKT+ LLSLI SY + +P+ A KL Sbjct: 11 YFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYTISKPQGAIKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YCTRTV EM+K L EL+ + ++ K + K LA+GL++R+NLC++P V Sbjct: 71 IYCTRTVHEMEKTLAELKLLHNYQVK--------HLGPAAKILAIGLSSRKNLCVNPNVL 122 Query: 359 SASSREEADALCRSMTASWAR 421 A++R+ DA CR TASW R Sbjct: 123 EANNRDSVDAACRKRTASWVR 143 [11][TOP] >UniRef100_A7PU96 Chromosome chr7 scaffold_31, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7PU96_VITVI Length = 758 Score = 154 bits (389), Expect = 3e-36 Identities = 79/141 (56%), Positives = 103/141 (73%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRP-ELAKL 178 YFPY+ +YPEQY+YMV+LKR LDA+GH++LEMPTGTGKT+ LLSLI SY L +P KL Sbjct: 11 YFPYDNIYPEQYSYMVELKRALDAKGHALLEMPTGTGKTIALLSLITSYALSKPSNPIKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YCTRTV EM+K L ELR L H+ + + + LA+GL++R+NLC++PAV Sbjct: 71 LYCTRTVHEMEKTLAELR--LLHQYQL------RHLGPAARILALGLSSRKNLCINPAVV 122 Query: 359 SASSREEADALCRSMTASWAR 421 SA +R+ DA CR +TASW R Sbjct: 123 SAENRDSVDAGCRKLTASWVR 143 [12][TOP] >UniRef100_B6HAC8 Pc16g12370 protein n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6HAC8_PENCW Length = 795 Score = 153 bits (386), Expect = 7e-36 Identities = 77/148 (52%), Positives = 101/148 (68%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM DLK+TLD GH +LEMP+GTGKTV+LLSLI++YQ + PE KL+Y Sbjct: 12 FPYPRIYPEQYAYMCDLKKTLDVGGHCVLEMPSGTGKTVSLLSLIVAYQQHYPEHRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL+ ++ HR K + R A+GLT+R+NLCLHP+V Sbjct: 72 CSRTMSEIEKALAELKALMEHRAKELGHEEEFR--------ALGLTSRKNLCLHPSVKRE 123 Query: 365 SSREEADALCRSMTASWARGDPEDIEDV 448 S DA CRS+TA + + E EDV Sbjct: 124 KSGTVVDARCRSLTAGFVKEKKERGEDV 151 [13][TOP] >UniRef100_B9S438 DNA repair helicase rad3/xp-d, putative n=1 Tax=Ricinus communis RepID=B9S438_RICCO Length = 758 Score = 152 bits (384), Expect = 1e-35 Identities = 74/141 (52%), Positives = 102/141 (72%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPEL-AKL 178 YFPY+ +YPEQY+YM++LKR LDA+GH +LEMPTGTGKT+ LLSLI SY L +P+ KL Sbjct: 11 YFPYDNIYPEQYSYMIELKRALDAKGHCLLEMPTGTGKTIALLSLITSYSLSKPQSPVKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YCTRTV EM+K L EL+ + ++ K + + LA+GL++R+NLC++P V Sbjct: 71 IYCTRTVHEMEKTLAELKLLHNYQIK--------HLGPAARILAIGLSSRKNLCVNPRVL 122 Query: 359 SASSREEADALCRSMTASWAR 421 +A +R+ DA CR +TASW R Sbjct: 123 AAENRDSVDAGCRKLTASWMR 143 [14][TOP] >UniRef100_B6AFA0 DNA repair helicase family protein n=1 Tax=Cryptosporidium muris RN66 RepID=B6AFA0_9CRYT Length = 835 Score = 152 bits (384), Expect = 1e-35 Identities = 77/153 (50%), Positives = 99/153 (64%), Gaps = 13/153 (8%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 +FPY++VYPEQ YM LK+ LDA H +LEMPTGTGKTVTL S I SYQL P L +L+ Sbjct: 12 FFPYDYVYPEQLEYMKYLKQILDAHSHGVLEMPTGTGKTVTLFSFITSYQLAHPNLGRLI 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASR-------------KTLAVGLT 322 YCTRTV EM+K L EL+ V+ +R K +D A + LA+G++ Sbjct: 72 YCTRTVAEMEKALLELKTVINYRIKELQKDKLALQETNNINISTSENQILNGSILAIGMS 131 Query: 323 TRRNLCLHPAVSSASSREEADALCRSMTASWAR 421 RRNLC++ +V S S R++ DA+CRSMTA W R Sbjct: 132 ARRNLCINSSVISNSDRDKIDAMCRSMTAPWVR 164 [15][TOP] >UniRef100_Q5AQJ4 Putative uncharacterized protein n=1 Tax=Emericella nidulans RepID=Q5AQJ4_EMENI Length = 797 Score = 152 bits (384), Expect = 1e-35 Identities = 78/148 (52%), Positives = 100/148 (67%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM DLK+TLDA GH +LEMP+GTGKTVTLLSLI++YQ + PE KL+Y Sbjct: 12 FPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVTLLSLIVAYQQHYPEHRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L ELR ++ R + R A+GLT+R+NLCLHP+V Sbjct: 72 CSRTMSEIEKALAELRELMKFRSEQLGYTEDFR--------ALGLTSRKNLCLHPSVKRE 123 Query: 365 SSREEADALCRSMTASWARGDPEDIEDV 448 S DA CRS+TA + + E EDV Sbjct: 124 KSGTVVDARCRSLTAGFVKEKKEKGEDV 151 [16][TOP] >UniRef100_C8VRA9 5' to 3' DNA helicase (Eurofung) n=1 Tax=Aspergillus nidulans FGSC A4 RepID=C8VRA9_EMENI Length = 791 Score = 152 bits (384), Expect = 1e-35 Identities = 78/148 (52%), Positives = 100/148 (67%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM DLK+TLDA GH +LEMP+GTGKTVTLLSLI++YQ + PE KL+Y Sbjct: 12 FPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVTLLSLIVAYQQHYPEHRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L ELR ++ R + R A+GLT+R+NLCLHP+V Sbjct: 72 CSRTMSEIEKALAELRELMKFRSEQLGYTEDFR--------ALGLTSRKNLCLHPSVKRE 123 Query: 365 SSREEADALCRSMTASWARGDPEDIEDV 448 S DA CRS+TA + + E EDV Sbjct: 124 KSGTVVDARCRSLTAGFVKEKKEKGEDV 151 [17][TOP] >UniRef100_UPI0001A2C3FA excision repair cross-complementing rodent repair deficiency, complementation group 2 n=1 Tax=Danio rerio RepID=UPI0001A2C3FA Length = 643 Score = 152 bits (383), Expect = 2e-35 Identities = 77/167 (46%), Positives = 112/167 (67%), Gaps = 13/167 (7%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQY+YM++LKRTLDA+GH +LEMP+GTGKT++LLSLI++YQ Y E+ KL Sbjct: 11 YFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQKTYPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 VYC+RTV E++KV+ ELR+++ + K + LA+ L++R+NLC+HP VS Sbjct: 71 VYCSRTVPEIEKVVEELRKLMDYYSK--------QTGVKNDFLALALSSRKNLCIHPEVS 122 Query: 359 SASSREEADALCRSMTASWARGDP------------EDIEDVGGRAP 463 S +E D C S+TAS+ R E+ ++VG + P Sbjct: 123 SLRFGKEVDGKCHSLTASYIRAQHQSNPNQPVCQFYEEFDNVGRQVP 169 [18][TOP] >UniRef100_Q7ZWH2 Excision repair cross-complementing rodent repair deficiency, complementation group 2 n=1 Tax=Danio rerio RepID=Q7ZWH2_DANRE Length = 643 Score = 152 bits (383), Expect = 2e-35 Identities = 77/167 (46%), Positives = 112/167 (67%), Gaps = 13/167 (7%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQY+YM++LKRTLDA+GH +LEMP+GTGKT++LLSLI++YQ Y E+ KL Sbjct: 11 YFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQKTYPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 VYC+RTV E++KV+ ELR+++ + K + LA+ L++R+NLC+HP VS Sbjct: 71 VYCSRTVPEIEKVVEELRKLMDYYSK--------QTGVKNDFLALALSSRKNLCIHPEVS 122 Query: 359 SASSREEADALCRSMTASWARGDP------------EDIEDVGGRAP 463 S +E D C S+TAS+ R E+ ++VG + P Sbjct: 123 SLRFGKEVDGKCHSLTASYIRAQHQSNPNQPVCQFYEEFDNVGRQVP 169 [19][TOP] >UniRef100_Q4P6W2 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4P6W2_USTMA Length = 850 Score = 152 bits (383), Expect = 2e-35 Identities = 80/176 (45%), Positives = 107/176 (60%), Gaps = 30/176 (17%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM DLKRTLDA GH +LEMP+GTGKTV+LLSLI+SYQ + P KL+Y Sbjct: 12 FPYPKIYPEQYAYMTDLKRTLDANGHCVLEMPSGTGKTVSLLSLIVSYQQFHPAKRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKT-------------------- 304 C+RTV E++K L EL+R++ +R + + A +++ Sbjct: 72 CSRTVPEIEKALAELKRLMEYRARYNVQQDQASGVLKKESQSSDRPGEHNIEMNGKGNTG 131 Query: 305 ------LAVGLTTRRNLCLHPAVSSASSREEADALCRSMTASWA----RGDPEDIE 442 LA+GL++R+NLC+HP VS + DA CR MT+SWA R DP +E Sbjct: 132 SQMEDILALGLSSRKNLCIHPDVSRERKGKVVDARCRDMTSSWACEKGRQDPGSVE 187 [20][TOP] >UniRef100_UPI00017B140B UPI00017B140B related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B140B Length = 759 Score = 151 bits (382), Expect = 2e-35 Identities = 77/167 (46%), Positives = 112/167 (67%), Gaps = 13/167 (7%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRP-ELAKL 178 YFPY+++YPEQY+YM++LKRTLDA+GH +LEMP+GTGKT++LLSLI++YQ P E+ KL Sbjct: 11 YFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQKAFPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L + K + + LA+ L++R+NLC+HP VS Sbjct: 71 IYCSRTVPEIEKVVEELRKLLEYYTK--------QTGENNNFLALALSSRKNLCIHPEVS 122 Query: 359 SASSREEADALCRSMTASWARGDP------------EDIEDVGGRAP 463 + +E D C S+TAS+ R ED + VG + P Sbjct: 123 ALRFGKEVDGKCHSLTASYIRAQRHSDSNVPACRFFEDFDAVGRQVP 169 [21][TOP] >UniRef100_Q0D0E0 DNA repair helicase RAD3 n=1 Tax=Aspergillus terreus NIH2624 RepID=Q0D0E0_ASPTN Length = 790 Score = 151 bits (382), Expect = 2e-35 Identities = 78/148 (52%), Positives = 101/148 (68%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM DLK+TLDA GH +LEMP+GTGKTV+LLSLI++YQL+ PE KL+Y Sbjct: 12 FPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQLHYPEHRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL+ ++ R K R A+GLT+R+NLCLHP+V Sbjct: 72 CSRTMSEIEKALAELKALMKFRAKELGYTEDFR--------ALGLTSRKNLCLHPSVKRE 123 Query: 365 SSREEADALCRSMTASWARGDPEDIEDV 448 S DA CRS+TA + + E EDV Sbjct: 124 KSGTVVDARCRSLTAGFVKEKKERGEDV 151 [22][TOP] >UniRef100_Q4RFX1 Chromosome 16 SCAF15113, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4RFX1_TETNG Length = 759 Score = 150 bits (380), Expect = 3e-35 Identities = 72/141 (51%), Positives = 105/141 (74%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRP-ELAKL 178 YFPY+++YPEQY+YM++LKRTLDA+GH +LEMP+GTGKT++LLSLI++YQ P E+ KL Sbjct: 10 YFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQKAFPLEVTKL 69 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L + K + + LA+ L++R+NLC+HP VS Sbjct: 70 IYCSRTVPEIEKVVEELRKLLEYYTK--------QTGENNNFLALALSSRKNLCIHPEVS 121 Query: 359 SASSREEADALCRSMTASWAR 421 + +E D C S+TAS+ R Sbjct: 122 ALRFGKEVDGKCHSLTASYIR 142 [23][TOP] >UniRef100_C1GUK1 DNA repair helicase RAD3 n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1GUK1_PARBA Length = 797 Score = 150 bits (380), Expect = 3e-35 Identities = 76/148 (51%), Positives = 101/148 (68%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM DLK+TLDA GH +LEMP+GTGKTV+LLSLI++YQ ++PE KL+Y Sbjct: 12 FPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQQHKPEQRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL+ ++ +R + R +GLT+R+NLCLHP+V Sbjct: 72 CSRTMSEIEKALAELKALMKYRAQQLGYTEDFR--------GLGLTSRKNLCLHPSVKRE 123 Query: 365 SSREEADALCRSMTASWARGDPEDIEDV 448 S DA CRSMTA + + E EDV Sbjct: 124 KSGTIVDARCRSMTAGFVKEKKERGEDV 151 [24][TOP] >UniRef100_Q9P609 Probable excision repair protein rhp3 n=1 Tax=Neurospora crassa RepID=Q9P609_NEUCR Length = 806 Score = 150 bits (379), Expect = 4e-35 Identities = 77/148 (52%), Positives = 101/148 (68%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYMVDLK+TLDA G+ +LEMP+GTGKTVTLLSLI++YQ Y PE KL+Y Sbjct: 12 FPYPRIYPEQYAYMVDLKKTLDAGGNCVLEMPSGTGKTVTLLSLIVAYQQYYPEHRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L ELR ++ R + + R +GLT+R+NLCLHP+V Sbjct: 72 CSRTMSEIEKALVELRALMKFRAERLGHEEEFR--------GLGLTSRKNLCLHPSVKRE 123 Query: 365 SSREEADALCRSMTASWARGDPEDIEDV 448 S DA CRS+TA + + E E+V Sbjct: 124 KSGAIVDARCRSLTAGFVKEKREKGENV 151 [25][TOP] >UniRef100_Q8W4M7 DNA repair helicase UVH6 n=1 Tax=Arabidopsis thaliana RepID=ERCC2_ARATH Length = 758 Score = 150 bits (379), Expect = 4e-35 Identities = 77/141 (54%), Positives = 100/141 (70%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPEL-AKL 178 YFPY+ +YPEQY YMV+LKR LDA+GH +LEMPTGTGKT+ LLSLI SY+L RP+ KL Sbjct: 11 YFPYDNIYPEQYEYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYRLSRPDSPIKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 VYCTRTV EM+K L EL+ + ++ + A K LA+GL++R+NLC++ V Sbjct: 71 VYCTRTVHEMEKTLGELKLLHDYQVRHLGTQA--------KILALGLSSRKNLCVNTKVL 122 Query: 359 SASSREEADALCRSMTASWAR 421 +A +R+ DA CR TASW R Sbjct: 123 AAENRDSVDAACRKRTASWVR 143 [26][TOP] >UniRef100_B5X1K2 TFIIH basal transcription factor complex helicase subunit n=1 Tax=Salmo salar RepID=B5X1K2_SALSA Length = 760 Score = 150 bits (378), Expect = 6e-35 Identities = 72/141 (51%), Positives = 102/141 (72%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRP-ELAKL 178 YFPY+++YPEQY+YM++LKRTLDA+GH +LEMP+GTGKT++LLSLI++YQ P E+ KL Sbjct: 11 YFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQREYPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR+++ K LA+ L++R+NLC+HP VS Sbjct: 71 IYCSRTVPEIEKVVEELRKLMEFYSK--------ETGEKNNILALALSSRKNLCVHPEVS 122 Query: 359 SASSREEADALCRSMTASWAR 421 S +E D C S+TAS+ R Sbjct: 123 SLRFGKEVDGKCHSLTASYIR 143 [27][TOP] >UniRef100_Q55G81 TFIIH basal transcription factor complex helicase repD subunit n=1 Tax=Dictyostelium discoideum RepID=ERCC2_DICDI Length = 776 Score = 150 bits (378), Expect = 6e-35 Identities = 75/143 (52%), Positives = 100/143 (69%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 YFPY ++YPEQY+YMV LKR+LD G ILEMP+GTGKTV+LLSLI SYQ+ P + KL+ Sbjct: 11 YFPYSYIYPEQYSYMVALKRSLDNGGPCILEMPSGTGKTVSLLSLISSYQVKNPSI-KLI 69 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 YC+RTV E+++ E RRVL +R+ E++P KTL + +++RRNLC+ P VS Sbjct: 70 YCSRTVPEIEQATEEARRVLQYRNSEMGEESP-------KTLCMSMSSRRNLCIQPRVSE 122 Query: 362 ASSREEADALCRSMTASWARGDP 430 + DALCR +T+SW R P Sbjct: 123 ERDGKVVDALCRELTSSWNRESP 145 [28][TOP] >UniRef100_UPI000069E0C0 TFIIH basal transcription factor complex helicase subunit (EC 3.6.1.-) (DNA-repair protein complementing XP-D cells) (Xeroderma pigmentosum group D-complementing protein) (CXPD) (DNA excision repair protein ERCC-2). n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI000069E0C0 Length = 743 Score = 149 bits (377), Expect = 7e-35 Identities = 73/145 (50%), Positives = 106/145 (73%), Gaps = 1/145 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPYE++YPEQY+YM++LKRTLDA+GH +LEMP+GTGKTV+LLSLI++YQ Y E+ KL Sbjct: 10 YFPYEYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLSLIVAYQRAYPLEVTKL 69 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR+++ E A+ + +A+ L++RRNLC++P VS Sbjct: 70 IYCSRTVPEIEKVVEELRKLI--------EYTQAQTGGTLNFMALALSSRRNLCVNPEVS 121 Query: 359 SASSREEADALCRSMTASWARGDPE 433 + +E D C S+TAS+ R + Sbjct: 122 ALRFGKEIDGRCHSLTASFVRSQKQ 146 [29][TOP] >UniRef100_Q66II2 Ercc2 protein n=1 Tax=Xenopus (Silurana) tropicalis RepID=Q66II2_XENTR Length = 760 Score = 149 bits (377), Expect = 7e-35 Identities = 73/145 (50%), Positives = 106/145 (73%), Gaps = 1/145 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPYE++YPEQY+YM++LKRTLDA+GH +LEMP+GTGKTV+LLSLI++YQ Y E+ KL Sbjct: 11 YFPYEYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLSLIVAYQRAYPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR+++ E A+ + +A+ L++RRNLC++P VS Sbjct: 71 IYCSRTVPEIEKVVEELRKLI--------EYTQAQTGGTLNFMALALSSRRNLCVNPEVS 122 Query: 359 SASSREEADALCRSMTASWARGDPE 433 + +E D C S+TAS+ R + Sbjct: 123 ALRFGKEIDGRCHSLTASFVRSQKQ 147 [30][TOP] >UniRef100_B5XDZ4 TFIIH basal transcription factor complex helicase subunit n=1 Tax=Salmo salar RepID=B5XDZ4_SALSA Length = 319 Score = 149 bits (377), Expect = 7e-35 Identities = 72/141 (51%), Positives = 102/141 (72%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRP-ELAKL 178 YFPY+++YPEQY+YM++LKRTLDA+GH +LEMP+GTGKT++LLSLI++YQ P E+ KL Sbjct: 11 YFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQREYPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR+++ K LA+ L++R+NLC+HP VS Sbjct: 71 IYCSRTVPEIEKVVEELRKLVEFYSK--------ETGEKNNILALALSSRKNLCVHPEVS 122 Query: 359 SASSREEADALCRSMTASWAR 421 S +E D C S+TAS+ R Sbjct: 123 SLRFGKEVDGKCHSLTASYIR 143 [31][TOP] >UniRef100_Q6MYA3 DNA repair helicase, putative n=1 Tax=Aspergillus fumigatus RepID=Q6MYA3_ASPFU Length = 767 Score = 149 bits (377), Expect = 7e-35 Identities = 76/148 (51%), Positives = 100/148 (67%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM DLK+TLDA GH +LEMP+GTGKTV+LLSLI++YQ + PE KL+Y Sbjct: 12 FPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQQHYPEHRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL+ ++ R + R A+GLT+R+NLCLHP+V Sbjct: 72 CSRTMSEIEKALAELKELMKFRSQQLGYTEDFR--------ALGLTSRKNLCLHPSVKRE 123 Query: 365 SSREEADALCRSMTASWARGDPEDIEDV 448 S DA CRS+TA + + E EDV Sbjct: 124 KSGTVVDARCRSLTAGFVKEKKERGEDV 151 [32][TOP] >UniRef100_Q2UCR0 RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH n=1 Tax=Aspergillus oryzae RepID=Q2UCR0_ASPOR Length = 794 Score = 149 bits (377), Expect = 7e-35 Identities = 76/148 (51%), Positives = 101/148 (68%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM DLK+TLDA GH +LEMP+GTGKTV+LLSLI++YQ++ PE KL+Y Sbjct: 12 FPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQMHYPEHRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL+ ++ R + R A+GLT+R+NLCLHP+V Sbjct: 72 CSRTMSEIEKALAELKALMKFRTQQLGYTEDFR--------ALGLTSRKNLCLHPSVKRE 123 Query: 365 SSREEADALCRSMTASWARGDPEDIEDV 448 S DA CRS+TA + + E EDV Sbjct: 124 KSGTIVDARCRSLTAGFVKEKKERGEDV 151 [33][TOP] >UniRef100_B8N4P3 TFIIH complex helicase Rad3, putative n=1 Tax=Aspergillus flavus NRRL3357 RepID=B8N4P3_ASPFN Length = 794 Score = 149 bits (377), Expect = 7e-35 Identities = 76/148 (51%), Positives = 101/148 (68%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM DLK+TLDA GH +LEMP+GTGKTV+LLSLI++YQ++ PE KL+Y Sbjct: 12 FPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQMHYPEHRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL+ ++ R + R A+GLT+R+NLCLHP+V Sbjct: 72 CSRTMSEIEKALAELKALMKFRTQQLGYTEDFR--------ALGLTSRKNLCLHPSVKRE 123 Query: 365 SSREEADALCRSMTASWARGDPEDIEDV 448 S DA CRS+TA + + E EDV Sbjct: 124 KSGTIVDARCRSLTAGFVKEKKERGEDV 151 [34][TOP] >UniRef100_Q5CHW8 DNA repair protein-related n=1 Tax=Cryptosporidium hominis RepID=Q5CHW8_CRYHO Length = 841 Score = 149 bits (376), Expect = 1e-34 Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 19/159 (11%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 +FPY+ VYPEQ YM LK+ LDA H +LEMPTGTGKTVTLLS I SYQL P + KL+ Sbjct: 12 FFPYDNVYPEQLEYMKYLKQILDAHSHGVLEMPTGTGKTVTLLSFITSYQLVHPNMGKLI 71 Query: 182 YCTRTVGEMDKVLYELRRVL-------------------AHRDKCFAEDAPARAAASRKT 304 YCTRTV EM+K L EL+ V+ + + FA + +R +A+ Sbjct: 72 YCTRTVAEMEKALQELKTVVDYCKKEIENDKIKLELEIKSENNSSFASVSESRLSAA-SI 130 Query: 305 LAVGLTTRRNLCLHPAVSSASSREEADALCRSMTASWAR 421 L +G+T RRN+C++P VS + R++ D++CRSMTA W R Sbjct: 131 LGIGMTARRNMCINPRVSVHADRDKIDSMCRSMTAPWVR 169 [35][TOP] >UniRef100_A2QRS5 Phenotype: S. pombe rad15 gene is essential for viability n=1 Tax=Aspergillus niger CBS 513.88 RepID=A2QRS5_ASPNC Length = 801 Score = 149 bits (376), Expect = 1e-34 Identities = 77/148 (52%), Positives = 100/148 (67%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM DLK+TLDA GH +LEMP+GTGKTV+LLSLI++YQ + PE KL+Y Sbjct: 12 FPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHYPEHRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL+ ++ R K R A+GLT+R+NLCLHP+V Sbjct: 72 CSRTMSEIEKALAELKALMKFRAKELGYTEDFR--------ALGLTSRKNLCLHPSVKRE 123 Query: 365 SSREEADALCRSMTASWARGDPEDIEDV 448 S DA CRS+TA + + E EDV Sbjct: 124 KSGAVVDARCRSLTAGFVKEKKERGEDV 151 [36][TOP] >UniRef100_A1D225 TFIIH complex helicase Rad3, putative n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1D225_NEOFI Length = 794 Score = 149 bits (376), Expect = 1e-34 Identities = 76/148 (51%), Positives = 100/148 (67%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM DLK+TLDA GH +LEMP+GTGKTV+LLSLI++YQ + PE KL+Y Sbjct: 12 FPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQQHYPEHRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL+ ++ R + R A+GLT+R+NLCLHP+V Sbjct: 72 CSRTMSEIEKALAELKELMKFRTQQLGYTEDFR--------ALGLTSRKNLCLHPSVKRE 123 Query: 365 SSREEADALCRSMTASWARGDPEDIEDV 448 S DA CRS+TA + + E EDV Sbjct: 124 KSGTVVDARCRSLTAGFVKEKKERGEDV 151 [37][TOP] >UniRef100_B8C2D9 Nucleotide excision repair protein ERCC2 n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C2D9_THAPS Length = 770 Score = 149 bits (375), Expect = 1e-34 Identities = 79/139 (56%), Positives = 94/139 (67%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 +FPY+ +Y EQY YM LK+TLDA GH +LEMPTGTGKTV LLSLI SYQL P KLV Sbjct: 11 FFPYDRIYLEQYQYMRALKQTLDAGGHCLLEMPTGTGKTVCLLSLITSYQLANPNCGKLV 70 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 YCTRTV EM+ V+ EL VLA+R + + A LA+ L++RRN+C+H V Sbjct: 71 YCTRTVPEMNSVMEELGTVLAYRSE--------QLGAGSGVLALCLSSRRNMCIHERVLR 122 Query: 362 ASSREEADALCRSMTASWA 418 S RE DA CRSMTA WA Sbjct: 123 ESDREGIDAACRSMTAPWA 141 [38][TOP] >UniRef100_C5PA98 DNA repair helicase rad15 , putative n=1 Tax=Coccidioides posadasii C735 delta SOWgp RepID=C5PA98_COCP7 Length = 795 Score = 149 bits (375), Expect = 1e-34 Identities = 75/148 (50%), Positives = 101/148 (68%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAY+ DLK+TLD GH +LEMP+GTGKTV+LLSLI++YQ + P KL+Y Sbjct: 12 FPYPRIYPEQYAYICDLKKTLDVGGHCVLEMPSGTGKTVSLLSLIIAYQQHYPSHRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L ELR ++ +R++ R A+GLT+R+NLCLHP+V Sbjct: 72 CSRTMSEIEKALTELRELMKYREQQLGYTEDFR--------ALGLTSRKNLCLHPSVRRE 123 Query: 365 SSREEADALCRSMTASWARGDPEDIEDV 448 S DA CRS+TAS+ + E EDV Sbjct: 124 KSGTVVDARCRSLTASFVKERKEKGEDV 151 [39][TOP] >UniRef100_C5FC47 DNA repair helicase RAD3 n=1 Tax=Microsporum canis CBS 113480 RepID=C5FC47_NANOT Length = 792 Score = 149 bits (375), Expect = 1e-34 Identities = 74/148 (50%), Positives = 100/148 (67%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM DLK+ LDA GH +LEMP+GTGKT+TLL+LI++YQ + PE KL+Y Sbjct: 12 FPYPRIYPEQYAYMCDLKKVLDAGGHCVLEMPSGTGKTITLLALIVAYQQHYPEHRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL ++ +R + + A A+GLT+R+NLCLHP+V Sbjct: 72 CSRTMSEIEKALSELHALMKYRSQ--------KLGAVEDFRALGLTSRKNLCLHPSVKRE 123 Query: 365 SSREEADALCRSMTASWARGDPEDIEDV 448 S DA CRS+TA + + E EDV Sbjct: 124 KSGTVVDARCRSLTAGFVKEKKEKGEDV 151 [40][TOP] >UniRef100_UPI000180AF16 PREDICTED: similar to ERCC2/XPD gene product n=1 Tax=Ciona intestinalis RepID=UPI000180AF16 Length = 760 Score = 148 bits (373), Expect = 2e-34 Identities = 74/141 (52%), Positives = 102/141 (72%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPE-LAKL 178 YFPYEF+YPEQY+YM++LKRTLDA+GH +LEMP+GTGKT TLLSLI++YQ PE ++KL Sbjct: 11 YFPYEFIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTATLLSLIVAYQYEYPEIISKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KVL ELRR++ + +K E K A+ L++R+NLC++ +V Sbjct: 71 IYCSRTVPEIEKVLEELRRLMEYYEKEVGE--------VPKLCALALSSRKNLCINASVR 122 Query: 359 SASSREEADALCRSMTASWAR 421 A +E D C +TAS R Sbjct: 123 GARIGKEVDTKCHQLTASHVR 143 [41][TOP] >UniRef100_C1FYI3 DNA repair helicase RAD3 n=1 Tax=Paracoccidioides brasiliensis Pb18 RepID=C1FYI3_PARBD Length = 791 Score = 148 bits (373), Expect = 2e-34 Identities = 74/148 (50%), Positives = 100/148 (67%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM DLK+TLD GH +LEMP+GTGKTV+LLSLI++YQ ++PE KL+Y Sbjct: 60 FPYPRIYPEQYAYMCDLKKTLDTGGHCVLEMPSGTGKTVSLLSLIIAYQQHKPEQRKLIY 119 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL+ ++ +R + R +GLT+R+NLCLHP+V Sbjct: 120 CSRTMSEIEKALAELKALMKYRAQQLGYTEDFR--------GLGLTSRKNLCLHPSVKRE 171 Query: 365 SSREEADALCRSMTASWARGDPEDIEDV 448 S DA CRS+TA + + E EDV Sbjct: 172 KSGTIVDARCRSLTAGFVKEKKERGEDV 199 [42][TOP] >UniRef100_C5G7Q3 DNA repair helicase RAD3 n=1 Tax=Ajellomyces dermatitidis ER-3 RepID=C5G7Q3_AJEDR Length = 779 Score = 147 bits (372), Expect = 3e-34 Identities = 74/139 (53%), Positives = 99/139 (71%), Gaps = 2/139 (1%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM DLK+TLDA GH +LEMP+GTGKTV+LLSLI++YQ +RPE KL+Y Sbjct: 12 FPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQQHRPEQRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDK--CFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 C+RT+ E++K L EL+ ++ +R + +AED +GLT+R+NLCLHP+V Sbjct: 72 CSRTMSEIEKALAELKALMKYRTRQLGYAED----------FRGLGLTSRKNLCLHPSVK 121 Query: 359 SASSREEADALCRSMTASW 415 S DA CRS+TA + Sbjct: 122 REKSGAVVDARCRSLTAGF 140 [43][TOP] >UniRef100_UPI000179D7AE UPI000179D7AE related cluster n=1 Tax=Bos taurus RepID=UPI000179D7AE Length = 760 Score = 147 bits (371), Expect = 4e-34 Identities = 70/141 (49%), Positives = 104/141 (73%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQ++YM++LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL Sbjct: 11 YFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L+ +K E P L + L++R+NLC+HP V+ Sbjct: 71 IYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLP--------FLGLALSSRKNLCIHPEVT 122 Query: 359 SASSREEADALCRSMTASWAR 421 ++ D C S+TAS+ R Sbjct: 123 PLRFGKDVDGKCHSLTASYVR 143 [44][TOP] >UniRef100_UPI000179D7AD TFIIH basal transcription factor complex helicase subunit (EC 3.6.1.-) (DNA-repair protein complementing XP-D cells) (Xeroderma pigmentosum group D-complementing protein) (CXPD) (DNA excision repair protein ERCC-2). n=1 Tax=Bos taurus RepID=UPI000179D7AD Length = 764 Score = 147 bits (371), Expect = 4e-34 Identities = 70/141 (49%), Positives = 104/141 (73%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQ++YM++LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL Sbjct: 11 YFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L+ +K E P L + L++R+NLC+HP V+ Sbjct: 71 IYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLP--------FLGLALSSRKNLCIHPEVT 122 Query: 359 SASSREEADALCRSMTASWAR 421 ++ D C S+TAS+ R Sbjct: 123 PLRFGKDVDGKCHSLTASYVR 143 [45][TOP] >UniRef100_UPI000179D7AC TFIIH basal transcription factor complex helicase subunit (EC 3.6.1.-) (DNA-repair protein complementing XP-D cells) (Xeroderma pigmentosum group D-complementing protein) (CXPD) (DNA excision repair protein ERCC-2). n=1 Tax=Bos taurus RepID=UPI000179D7AC Length = 756 Score = 147 bits (371), Expect = 4e-34 Identities = 70/141 (49%), Positives = 104/141 (73%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQ++YM++LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL Sbjct: 10 YFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKL 69 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L+ +K E P L + L++R+NLC+HP V+ Sbjct: 70 IYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLP--------FLGLALSSRKNLCIHPEVT 121 Query: 359 SASSREEADALCRSMTASWAR 421 ++ D C S+TAS+ R Sbjct: 122 PLRFGKDVDGKCHSLTASYVR 142 [46][TOP] >UniRef100_A4S605 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S605_OSTLU Length = 788 Score = 147 bits (371), Expect = 4e-34 Identities = 78/161 (48%), Positives = 103/161 (63%), Gaps = 11/161 (6%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 +FPY +YPEQ A M + KR+LDARGH +EMPTGTGKT+T+LSL +SYQ+ PE KL+ Sbjct: 11 FFPYPQIYPEQLAMMTEFKRSLDARGHGAIEMPTGTGKTITVLSLCVSYQIAHPECGKLI 70 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 YCTRTV EM+KVL E R + ++ A A AA LA+GL++R+N+C++P V Sbjct: 71 YCTRTVPEMEKVLAECRTL----ERFIAARAGEDVAA---MLALGLSSRKNMCVNPRVVD 123 Query: 362 ASSREEADALCRSMTASWAR-----------GDPEDIEDVG 451 SRE D CR +TASW R + E++ED G Sbjct: 124 EGSRESVDGKCRRLTASWVREKRLEREARGASENENVEDGG 164 [47][TOP] >UniRef100_A5A791 DNA-repair protein complementing XP-D cells (Fragment) n=1 Tax=Sus scrofa RepID=A5A791_PIG Length = 756 Score = 147 bits (371), Expect = 4e-34 Identities = 70/141 (49%), Positives = 104/141 (73%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQ++YM++LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL Sbjct: 7 YFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKL 66 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L+ +K E P L + L++R+NLC+HP V+ Sbjct: 67 IYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLP--------FLGLALSSRKNLCIHPEVT 118 Query: 359 SASSREEADALCRSMTASWAR 421 ++ D C S+TAS+ R Sbjct: 119 PLRFGKDVDGKCHSLTASYVR 139 [48][TOP] >UniRef100_A1L590 Excision repair cross-complementing rodent repair deficiency, complementation group 2 protein (Fragment) n=1 Tax=Bos taurus RepID=A1L590_BOVIN Length = 773 Score = 147 bits (371), Expect = 4e-34 Identities = 70/141 (49%), Positives = 104/141 (73%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQ++YM++LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL Sbjct: 24 YFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKL 83 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L+ +K E P L + L++R+NLC+HP V+ Sbjct: 84 IYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLP--------FLGLALSSRKNLCIHPEVT 135 Query: 359 SASSREEADALCRSMTASWAR 421 ++ D C S+TAS+ R Sbjct: 136 PLRFGKDVDGKCHSLTASYVR 156 [49][TOP] >UniRef100_Q5CYV9 RAD3'DEXDc+HELICc protein' n=1 Tax=Cryptosporidium parvum Iowa II RepID=Q5CYV9_CRYPV Length = 841 Score = 147 bits (371), Expect = 4e-34 Identities = 77/158 (48%), Positives = 99/158 (62%), Gaps = 18/158 (11%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 +FPY+ VYPEQ YM LK+ LDA H +LEMPTGTGKTVTLLS I SYQL P + KL+ Sbjct: 12 FFPYDNVYPEQLEYMKYLKQILDAHSHGVLEMPTGTGKTVTLLSFITSYQLVHPNMGKLI 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAED--------------APARAAASR----KTL 307 YCTRTV EM+K L EL+ V+ + K D + A + SR L Sbjct: 72 YCTRTVAEMEKALQELKTVVDYCKKEIENDKIKLEQEIKSENNSSLASVSESRFSAASIL 131 Query: 308 AVGLTTRRNLCLHPAVSSASSREEADALCRSMTASWAR 421 +G+T RRN+C++P VS + R++ D++CRSMTA W R Sbjct: 132 GIGMTARRNMCINPRVSVHADRDKIDSMCRSMTAPWVR 169 [50][TOP] >UniRef100_Q5KNR6 General RNA polymerase II transcription factor, putative n=1 Tax=Filobasidiella neoformans RepID=Q5KNR6_CRYNE Length = 799 Score = 147 bits (371), Expect = 4e-34 Identities = 74/149 (49%), Positives = 101/149 (67%), Gaps = 4/149 (2%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY+ +YPEQY+YM DLK TLDA GH +LEMP+GTGKTV+LLSLI++Y + P KL+Y Sbjct: 12 FPYDRLYPEQYSYMADLKTTLDAGGHCVLEMPSGTGKTVSLLSLIIAYMQFYPNKRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RTV E++K L EL+R++ +R + A D R +GLT+RRNLCLHP VS Sbjct: 72 CSRTVPEIEKALAELKRLMMYRAEMGANDGDFR--------GLGLTSRRNLCLHPEVSKE 123 Query: 365 SSREEADALCRSMTASWA----RGDPEDI 439 + D+ CR +T+++A R DP + Sbjct: 124 KKGKIVDSRCRDLTSAFACEKGRADPGSV 152 [51][TOP] >UniRef100_A6QLJ0 TFIIH basal transcription factor complex helicase subunit n=1 Tax=Bos taurus RepID=ERCC2_BOVIN Length = 760 Score = 147 bits (371), Expect = 4e-34 Identities = 70/141 (49%), Positives = 104/141 (73%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQ++YM++LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL Sbjct: 11 YFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L+ +K E P L + L++R+NLC+HP V+ Sbjct: 71 IYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLP--------FLGLALSSRKNLCIHPEVT 122 Query: 359 SASSREEADALCRSMTASWAR 421 ++ D C S+TAS+ R Sbjct: 123 PLRFGKDVDGKCHSLTASYVR 143 [52][TOP] >UniRef100_Q91941 ERCC2/XPD protein n=1 Tax=Xiphophorus maculatus RepID=Q91941_XIPMA Length = 760 Score = 147 bits (370), Expect = 5e-34 Identities = 71/141 (50%), Positives = 102/141 (72%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRP-ELAKL 178 YFPY+++YPEQY+YM++LKRTLDA+GH +LEMP+GTGKT++LLSLI++YQ P ++ KL Sbjct: 11 YFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQRAFPLDVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR+++ K LA+ L++R+NLC+HP VS Sbjct: 71 IYCSRTVPEIEKVVEELRKLMEFYAK--------ETGEVNNFLALSLSSRKNLCIHPEVS 122 Query: 359 SASSREEADALCRSMTASWAR 421 S +E D C S+TAS+ R Sbjct: 123 SLRFGKEVDGKCHSLTASYIR 143 [53][TOP] >UniRef100_C0NL48 DNA repair helicase RAD3 n=1 Tax=Ajellomyces capsulatus G186AR RepID=C0NL48_AJECG Length = 797 Score = 147 bits (370), Expect = 5e-34 Identities = 76/150 (50%), Positives = 102/150 (68%), Gaps = 2/150 (1%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM DLK+TLDA GH +LEMP+GTGKTV+LLSLI++YQ ++PE KL+Y Sbjct: 12 FPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHQPEQRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDK--CFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 C+RT+ E++K L EL+ ++ +R + F ED +GLT+R+NLCLHP+V Sbjct: 72 CSRTMSEIEKALAELKALMKYRAQQLGFVED----------FRGLGLTSRKNLCLHPSVK 121 Query: 359 SASSREEADALCRSMTASWARGDPEDIEDV 448 S DA CRS+TA + + E DV Sbjct: 122 REKSGAVVDARCRSLTAGFVKEKKEKGGDV 151 [54][TOP] >UniRef100_A9VAM5 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9VAM5_MONBE Length = 798 Score = 146 bits (368), Expect = 8e-34 Identities = 73/146 (50%), Positives = 101/146 (69%), Gaps = 1/146 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQL-YRPELAKL 178 +FPY+ +YPEQY YM ++KR LDA+GH++LEMP+GTGKTV+LLSLI+SYQL Y L K Sbjct: 31 FFPYDLIYPEQYEYMQEIKRALDAKGHALLEMPSGTGKTVSLLSLIVSYQLGYPGRLGKF 90 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KVL EL+RV+A+ K + L +GL++RRN+C+HP VS Sbjct: 91 IYCSRTVPEIEKVLGELKRVIAYMSK--------EMGRNLDYLGLGLSSRRNMCIHPDVS 142 Query: 359 SASSREEADALCRSMTASWARGDPED 436 + D+ CR +TAS+ R D Sbjct: 143 QERTGAIVDSRCRQLTASFVREKTAD 168 [55][TOP] >UniRef100_B6JX67 DNA repair helicase RAD3 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JX67_SCHJY Length = 773 Score = 146 bits (368), Expect = 8e-34 Identities = 70/139 (50%), Positives = 98/139 (70%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQY YM DLK++LD G ++LEMP+GTGKT++LLSLI+SYQ + PE KL+Y Sbjct: 12 FPYPRIYPEQYQYMCDLKKSLDVGGVALLEMPSGTGKTISLLSLIISYQQFYPEQRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E+DK L EL+R++A+R+K P L +GLT+R+NLCLHP+V Sbjct: 72 CSRTMSEIDKALAELKRLMAYREKELGRREP--------FLGLGLTSRKNLCLHPSVRRE 123 Query: 365 SSREEADALCRSMTASWAR 421 + DA CR++TA + + Sbjct: 124 KNGNVVDARCRALTAGFVK 142 [56][TOP] >UniRef100_P26659 DNA repair helicase rad15 n=1 Tax=Schizosaccharomyces pombe RepID=RAD15_SCHPO Length = 772 Score = 146 bits (368), Expect = 8e-34 Identities = 72/139 (51%), Positives = 97/139 (69%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQY YM DLK +LDA G ++LEMP+GTGKT++LLSLI+SYQ + PE KL+Y Sbjct: 12 FPYPRIYPEQYQYMCDLKHSLDAGGIALLEMPSGTGKTISLLSLIVSYQQHYPEHRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E+DK L EL+R++A+R + P L +GLT+R+NLCLHP+V Sbjct: 72 CSRTMSEIDKALAELKRLMAYRTSQLGYEEP--------FLGLGLTSRKNLCLHPSVRRE 123 Query: 365 SSREEADALCRSMTASWAR 421 + DA CRS+TA + R Sbjct: 124 KNGNVVDARCRSLTAGFVR 142 [57][TOP] >UniRef100_UPI000059FF8C PREDICTED: similar to TFIIH basal transcription factor complex helicase subunit (DNA-repair protein complementing XP-D cells) (Xeroderma pigmentosum group D complementing protein) (CXPD) (DNA excision repair protein ERCC-2) n=1 Tax=Canis lupus familiaris RepID=UPI000059FF8C Length = 641 Score = 145 bits (366), Expect = 1e-33 Identities = 70/141 (49%), Positives = 102/141 (72%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQ++YM++LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL Sbjct: 11 YFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L +K E P L + L++R+NLC+HP V Sbjct: 71 IYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLP--------FLGLALSSRKNLCIHPEVM 122 Query: 359 SASSREEADALCRSMTASWAR 421 ++ D C S+TAS+ R Sbjct: 123 PLRFGKDVDGKCHSLTASYVR 143 [58][TOP] >UniRef100_UPI000154E26C excision repair cross-complementing rodent repair deficiency, complementation group 2 n=1 Tax=Rattus norvegicus RepID=UPI000154E26C Length = 760 Score = 145 bits (366), Expect = 1e-33 Identities = 69/141 (48%), Positives = 104/141 (73%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQ++YM++LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL Sbjct: 11 YFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQRAYPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L+ ++ E P L + L++R+NLC+HP V+ Sbjct: 71 IYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLP--------FLGLALSSRKNLCIHPEVT 122 Query: 359 SASSREEADALCRSMTASWAR 421 ++ D C S+TAS+ R Sbjct: 123 PLRFGKDVDGKCHSLTASYVR 143 [59][TOP] >UniRef100_UPI0000EB4558 Excision repair cross-complementing 2 n=1 Tax=Canis lupus familiaris RepID=UPI0000EB4558 Length = 759 Score = 145 bits (366), Expect = 1e-33 Identities = 70/141 (49%), Positives = 102/141 (72%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQ++YM++LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL Sbjct: 11 YFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L +K E P L + L++R+NLC+HP V Sbjct: 71 IYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLP--------FLGLALSSRKNLCIHPEVM 122 Query: 359 SASSREEADALCRSMTASWAR 421 ++ D C S+TAS+ R Sbjct: 123 PLRFGKDVDGKCHSLTASYVR 143 [60][TOP] >UniRef100_Q8C487 Putative uncharacterized protein n=1 Tax=Mus musculus RepID=Q8C487_MOUSE Length = 760 Score = 145 bits (366), Expect = 1e-33 Identities = 69/141 (48%), Positives = 104/141 (73%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQ++YM++LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL Sbjct: 11 YFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQRAYPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L+ ++ E P L + L++R+NLC+HP V+ Sbjct: 71 IYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLP--------FLGLALSSRKNLCIHPEVT 122 Query: 359 SASSREEADALCRSMTASWAR 421 ++ D C S+TAS+ R Sbjct: 123 PLRFGKDVDGKCHSLTASYVR 143 [61][TOP] >UniRef100_O08811 TFIIH basal transcription factor complex helicase subunit n=1 Tax=Mus musculus RepID=ERCC2_MOUSE Length = 760 Score = 145 bits (366), Expect = 1e-33 Identities = 69/141 (48%), Positives = 104/141 (73%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQ++YM++LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL Sbjct: 11 YFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQRAYPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L+ ++ E P L + L++R+NLC+HP V+ Sbjct: 71 IYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLP--------FLGLALSSRKNLCIHPEVT 122 Query: 359 SASSREEADALCRSMTASWAR 421 ++ D C S+TAS+ R Sbjct: 123 PLRFGKDVDGKCHSLTASYVR 143 [62][TOP] >UniRef100_Q00XL6 DNA repair/transcription factor protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00XL6_OSTTA Length = 792 Score = 145 bits (365), Expect = 2e-33 Identities = 73/160 (45%), Positives = 103/160 (64%), Gaps = 20/160 (12%) Frame = +2 Query: 2 YFPYEFVYPEQYA--------------------YMVDLKRTLDARGHSILEMPTGTGKTV 121 +FPY+ VYPEQ A YM ++KR LDARGH +EMPTGTGKT+ Sbjct: 16 FFPYDSVYPEQVALARTRRLTRSARVRSIAKVAYMREMKRALDARGHGAVEMPTGTGKTI 75 Query: 122 TLLSLILSYQLYRPELAKLVYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRK 301 T+LS+ +SYQL PE+ K++YCTRTV EM+KVL E++ + A+ +K A + + Sbjct: 76 TVLSMCVSYQLAHPEVGKIIYCTRTVPEMEKVLEEMKALQAYIEK-------ELGAETAR 128 Query: 302 TLAVGLTTRRNLCLHPAVSSASSREEADALCRSMTASWAR 421 L++GL++R+N+C++PAV+ SRE D CR +TASW R Sbjct: 129 MLSLGLSSRKNMCVNPAVADEGSRESVDGRCRRLTASWVR 168 [63][TOP] >UniRef100_Q60452 TFIIH basal transcription factor complex helicase subunit n=1 Tax=Cricetulus griseus RepID=ERCC2_CRIGR Length = 760 Score = 145 bits (365), Expect = 2e-33 Identities = 69/141 (48%), Positives = 104/141 (73%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRP-ELAKL 178 YFPY+++YPEQ++YM++LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ P E+ KL Sbjct: 11 YFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQRAFPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L+ ++ E P L + L++R+NLC+HP V+ Sbjct: 71 IYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLP--------FLGLALSSRKNLCIHPEVT 122 Query: 359 SASSREEADALCRSMTASWAR 421 ++ D C S+TAS+ R Sbjct: 123 PLRFGKDVDGKCHSLTASYVR 143 [64][TOP] >UniRef100_UPI0000E25263 PREDICTED: excision repair cross-complementing rodent repair deficiency, complementation group 2 protein isoform 4 n=1 Tax=Pan troglodytes RepID=UPI0000E25263 Length = 769 Score = 144 bits (364), Expect = 2e-33 Identities = 70/141 (49%), Positives = 102/141 (72%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQ++YM +LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL Sbjct: 20 YFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKL 79 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L +K E P L + L++R+NLC+HP V+ Sbjct: 80 IYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLP--------FLGLALSSRKNLCIHPEVT 131 Query: 359 SASSREEADALCRSMTASWAR 421 ++ D C S+TAS+ R Sbjct: 132 PLRFGKDVDGKCHSLTASYVR 152 [65][TOP] >UniRef100_UPI00004E7B69 PREDICTED: excision repair cross-complementing rodent repair deficiency, complementation group 2 protein isoform 5 n=2 Tax=Pan troglodytes RepID=UPI00004E7B69 Length = 760 Score = 144 bits (364), Expect = 2e-33 Identities = 70/141 (49%), Positives = 102/141 (72%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQ++YM +LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL Sbjct: 11 YFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L +K E P L + L++R+NLC+HP V+ Sbjct: 71 IYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLP--------FLGLALSSRKNLCIHPEVT 122 Query: 359 SASSREEADALCRSMTASWAR 421 ++ D C S+TAS+ R Sbjct: 123 PLRFGKDVDGKCHSLTASYVR 143 [66][TOP] >UniRef100_C5LPK7 DNA repair helicase, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LPK7_9ALVE Length = 887 Score = 144 bits (364), Expect = 2e-33 Identities = 69/138 (50%), Positives = 100/138 (72%), Gaps = 1/138 (0%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDA-RGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 FPY+ +YPEQ YM LK+ LDA G ++EMPTGTGKTVT++SLI SYQL P++ KLV Sbjct: 15 FPYDAIYPEQVQYMHYLKQALDASHGQGLIEMPTGTGKTVTIMSLITSYQLSHPQMGKLV 74 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 YCTRTV EM++ + EL+ V+ +R++ A + P A +K L +GL+ RRN+C+HP V++ Sbjct: 75 YCTRTVPEMNQAIRELKLVIEYRERVLASEKPDE--APQKFLGIGLSARRNMCIHPDVAN 132 Query: 362 ASSREEADALCRSMTASW 415 + R++ D CR MT+++ Sbjct: 133 QADRDKIDIKCREMTSNF 150 [67][TOP] >UniRef100_C3Y0H1 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3Y0H1_BRAFL Length = 763 Score = 144 bits (364), Expect = 2e-33 Identities = 72/149 (48%), Positives = 104/149 (69%), Gaps = 1/149 (0%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRP-ELAKLV 181 FPY+++YPEQY+YMV+LKR+LDA+GH +LEMP+GTGKTV+LLSLI++Y P ++ KL+ Sbjct: 12 FPYDYIYPEQYSYMVELKRSLDAKGHCVLEMPSGTGKTVSLLSLIVAYLKTSPKDVCKLI 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 YC+RTV E++KVL ELR+++ + +K E + + L++R+NLC+HP VS+ Sbjct: 72 YCSRTVPEIEKVLEELRKLMEYYEKETGEPP--------NLIGLALSSRKNLCIHPEVST 123 Query: 362 ASSREEADALCRSMTASWARGDPEDIEDV 448 +E D C MTAS+ R E DV Sbjct: 124 LQFGKEVDGRCHQMTASFVRSRHERDPDV 152 [68][TOP] >UniRef100_P18074 TFIIH basal transcription factor complex helicase subunit n=1 Tax=Homo sapiens RepID=ERCC2_HUMAN Length = 760 Score = 144 bits (364), Expect = 2e-33 Identities = 70/141 (49%), Positives = 102/141 (72%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQ++YM +LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL Sbjct: 11 YFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L +K E P L + L++R+NLC+HP V+ Sbjct: 71 IYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLP--------FLGLALSSRKNLCIHPEVT 122 Query: 359 SASSREEADALCRSMTASWAR 421 ++ D C S+TAS+ R Sbjct: 123 PLRFGKDVDGKCHSLTASYVR 143 [69][TOP] >UniRef100_UPI0001796818 PREDICTED: similar to TFIIH basal transcription factor complex helicase subunit (DNA-repair protein complementing XP-D cells) (Xeroderma pigmentosum group D-complementing protein) (CXPD) (DNA excision repair protein ERCC-2) n=1 Tax=Equus caballus RepID=UPI0001796818 Length = 766 Score = 144 bits (362), Expect = 4e-33 Identities = 68/141 (48%), Positives = 103/141 (73%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQ++YM++LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL Sbjct: 20 YFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKL 79 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L +K + + L + L++R+NLC+HP V+ Sbjct: 80 IYCSRTVPEIEKVIEELRKLLNFYEK--------QEGEKLQFLGLALSSRKNLCIHPEVT 131 Query: 359 SASSREEADALCRSMTASWAR 421 ++ D C S+TAS+ R Sbjct: 132 PLRFGKDVDGKCHSLTASYVR 152 [70][TOP] >UniRef100_UPI00015B5091 PREDICTED: similar to ENSANGP00000018237 n=1 Tax=Nasonia vitripennis RepID=UPI00015B5091 Length = 763 Score = 144 bits (362), Expect = 4e-33 Identities = 67/141 (47%), Positives = 102/141 (72%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRP-ELAKL 178 YFPY+++YPEQYAYM+DLKR LDA+GH +LEMP+GTGKT+TLLSLI++Y L P ++ KL Sbjct: 15 YFPYDYIYPEQYAYMLDLKRGLDAKGHCLLEMPSGTGKTITLLSLIVAYMLEHPHQVTKL 74 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ EL++++ + +K K + + L++R+N+C+HP VS Sbjct: 75 IYCSRTVPEIEKVIEELKKLIDYYEK--------ETKVLPKIIGLVLSSRKNMCIHPEVS 126 Query: 359 SASSREEADALCRSMTASWAR 421 + D+ C ++TAS+ R Sbjct: 127 KEREGKIVDSQCHALTASYVR 147 [71][TOP] >UniRef100_B2B235 Predicted CDS Pa_6_5400 n=1 Tax=Podospora anserina RepID=B2B235_PODAN Length = 802 Score = 143 bits (361), Expect = 5e-33 Identities = 74/148 (50%), Positives = 98/148 (66%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYMVDLK+TLDA G+ +LEMP+GTGKTVTLLSLI++YQ+ E L+Y Sbjct: 12 FPYPRIYPEQYAYMVDLKKTLDAGGNCVLEMPSGTGKTVTLLSLIVAYQMSSQEKRPLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL+ ++ R + + R A+GLT+R+NLCLHP V Sbjct: 72 CSRTMSEIEKALVELKALMKFRAERLGHEEDFR--------AMGLTSRKNLCLHPDVKRE 123 Query: 365 SSREEADALCRSMTASWARGDPEDIEDV 448 S DA CRS+TA + + EDV Sbjct: 124 KSGSVVDARCRSLTAGFIQEKKRKGEDV 151 [72][TOP] >UniRef100_Q3UKK7 Putative uncharacterized protein n=1 Tax=Mus musculus RepID=Q3UKK7_MOUSE Length = 760 Score = 143 bits (360), Expect = 7e-33 Identities = 68/141 (48%), Positives = 103/141 (73%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQ++YM++LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL Sbjct: 11 YFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQRAYPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ E R++L+ ++ E P L + L++R+NLC+HP V+ Sbjct: 71 IYCSRTVPEIEKVIEERRKLLSFYEQQEGEKLP--------FLGLALSSRKNLCIHPEVT 122 Query: 359 SASSREEADALCRSMTASWAR 421 ++ D C S+TAS+ R Sbjct: 123 PLRFGKDVDGKCHSLTASYVR 143 [73][TOP] >UniRef100_A8NFF8 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NFF8_COPC7 Length = 789 Score = 143 bits (360), Expect = 7e-33 Identities = 72/135 (53%), Positives = 96/135 (71%), Gaps = 1/135 (0%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY+ +YPEQYAYM DLKRTLDA GH +LEMP+GTGKTV+LLSLI+SYQ + P KLVY Sbjct: 12 FPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQFFPTRRKLVY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHR-DKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 C+RTV E++K L EL+R++ +R D E+ + R + +GLT+R+NLC++P V+ Sbjct: 72 CSRTVPEIEKALTELKRLMKYRIDYAETEEEKEK---ERNFMGLGLTSRKNLCINPDVAR 128 Query: 362 ASSREEADALCRSMT 406 DA CR +T Sbjct: 129 EKKGTVVDARCRDLT 143 [74][TOP] >UniRef100_UPI0000DB6D67 PREDICTED: similar to Xeroderma pigmentosum D CG9433-PA, isoform A n=1 Tax=Apis mellifera RepID=UPI0000DB6D67 Length = 772 Score = 142 bits (358), Expect = 1e-32 Identities = 68/141 (48%), Positives = 104/141 (73%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRP-ELAKL 178 YFPY+++YPEQYAYM++LKR LDA+GH +LEMP+GTGKT+TLLSLI++Y L P ++ KL Sbjct: 24 YFPYDYIYPEQYAYMLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAYMLENPLDVTKL 83 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ EL++++ + +K ++ P K + + L++R+N+C+HP VS Sbjct: 84 IYCSRTVPEIEKVIEELKKLMDYYEK-ETDNKP-------KIVGLVLSSRKNMCIHPEVS 135 Query: 359 SASSREEADALCRSMTASWAR 421 + D C S+TAS+ R Sbjct: 136 REREGKIVDGRCHSLTASYVR 156 [75][TOP] >UniRef100_B4J6Q4 GH20727 n=1 Tax=Drosophila grimshawi RepID=B4J6Q4_DROGR Length = 769 Score = 142 bits (357), Expect = 2e-32 Identities = 69/141 (48%), Positives = 99/141 (70%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPE-LAKL 178 YFPYE++YPEQYAYM++LKR+LDA+GH +LEMP+GTGKT TLLSLI++Y + PE + KL Sbjct: 11 YFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYMIEHPERIRKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ EL+ ++ + DK A P + L++R+N+C+HP VS Sbjct: 71 IYCSRTVPEIEKVIAELQNLMVYYDK-HAHTPPGMT-------GLVLSSRKNMCIHPEVS 122 Query: 359 SASSREEADALCRSMTASWAR 421 + D C +TAS+ R Sbjct: 123 KEREGKAVDGKCYGLTASYIR 143 [76][TOP] >UniRef100_B4MQM8 GK21904 n=1 Tax=Drosophila willistoni RepID=B4MQM8_DROWI Length = 769 Score = 141 bits (356), Expect = 2e-32 Identities = 67/141 (47%), Positives = 102/141 (72%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPE-LAKL 178 YFPYE++YPEQYAYM++LKR+LDA+GH +LEMP+GTGKT TLLSLI++Y + PE + KL Sbjct: 11 YFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYMIEHPETIRKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ EL+ ++ + ++ +++ PA + L++R+N+C+HP VS Sbjct: 71 IYCSRTVPEIEKVIAELQNLMVYYER-HSDNPPAMT-------GLVLSSRKNMCIHPEVS 122 Query: 359 SASSREEADALCRSMTASWAR 421 + D C +TAS+ R Sbjct: 123 KEREGKAVDGKCYGLTASYVR 143 [77][TOP] >UniRef100_B6QC92 TFIIH complex helicase Rad3, putative n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QC92_PENMQ Length = 794 Score = 141 bits (356), Expect = 2e-32 Identities = 71/148 (47%), Positives = 99/148 (66%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQ+ YM DLK+ LDA GH +LEMP+GTGKTVTLLSLI++YQ + + KL+Y Sbjct: 12 FPYPKIYPEQWQYMCDLKKALDASGHCVLEMPSGTGKTVTLLSLIVAYQQHHGDSRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E+DK L+EL+ ++ +R ++ + +GL++R+NLCLHP+V Sbjct: 72 CSRTMSEIDKALHELKALMKYR--------ASQLGYTEDFRGLGLSSRKNLCLHPSVKRE 123 Query: 365 SSREEADALCRSMTASWARGDPEDIEDV 448 S DA CRS+TAS+ E EDV Sbjct: 124 KSGAVVDARCRSLTASFVVQKKERGEDV 151 [78][TOP] >UniRef100_Q7QD77 AGAP002988-PA (Fragment) n=1 Tax=Anopheles gambiae RepID=Q7QD77_ANOGA Length = 759 Score = 141 bits (355), Expect = 3e-32 Identities = 69/141 (48%), Positives = 98/141 (69%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELA-KL 178 YFPYE++YPEQYAYM++LKRT DA+GH +LEMP+GTGKT TLLSLI++Y L P + KL Sbjct: 10 YFPYEYIYPEQYAYMLELKRTFDAKGHCLLEMPSGTGKTTTLLSLIVAYILENPHVVRKL 69 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ EL+ ++ + +K + A + L++R+N+C+HP VS Sbjct: 70 IYCSRTVPEIEKVIAELKHLMNYYEK--------QTGAMPNITGLVLSSRKNMCIHPEVS 121 Query: 359 SASSREEADALCRSMTASWAR 421 + DA C MTAS+ R Sbjct: 122 REREGKIVDARCYGMTASYVR 142 [79][TOP] >UniRef100_B9Q0C5 Excision repair protein Rad15, putative n=1 Tax=Toxoplasma gondii GT1 RepID=B9Q0C5_TOXGO Length = 1065 Score = 141 bits (355), Expect = 3e-32 Identities = 81/194 (41%), Positives = 103/194 (53%), Gaps = 54/194 (27%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 YFPY+F+YPEQYAY+ LK TLDA+GH++LEMPTGTGKTV LLSL+ SYQL P L K++ Sbjct: 12 YFPYDFIYPEQYAYIRALKHTLDAKGHAVLEMPTGTGKTVALLSLLTSYQLAHPRLGKIL 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHR---------DKCFAEDAPAR-----AAASRKTL---- 307 YCTRTV EM+K L EL+ V+ +R K E +P +AS +L Sbjct: 72 YCTRTVPEMEKALLELKGVIDYRIEEIRKARETKARQEQSPCEEKEQTTSASGDSLGRMR 131 Query: 308 ------------------------------------AVGLTTRRNLCLHPAVSSASSREE 379 VGL+ RRN+C++PAV + RE Sbjct: 132 ELGTPGAAPLQPISKTTESEDPPYIGKDMARDGYILGVGLSARRNMCINPAVYNQPDRER 191 Query: 380 ADALCRSMTASWAR 421 D CR +TA W R Sbjct: 192 IDEACRQLTAPWVR 205 [80][TOP] >UniRef100_B6KSU0 Excision repair protein rad15, putative n=2 Tax=Toxoplasma gondii RepID=B6KSU0_TOXGO Length = 1065 Score = 141 bits (355), Expect = 3e-32 Identities = 81/194 (41%), Positives = 103/194 (53%), Gaps = 54/194 (27%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 YFPY+F+YPEQYAY+ LK TLDA+GH++LEMPTGTGKTV LLSL+ SYQL P L K++ Sbjct: 12 YFPYDFIYPEQYAYIRALKHTLDAKGHAVLEMPTGTGKTVALLSLLTSYQLAHPRLGKIL 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHR---------DKCFAEDAPAR-----AAASRKTL---- 307 YCTRTV EM+K L EL+ V+ +R K E +P +AS +L Sbjct: 72 YCTRTVPEMEKALLELKGVIDYRIEEIRKARETKARQEQSPCEEKEQTTSASGDSLGRKR 131 Query: 308 ------------------------------------AVGLTTRRNLCLHPAVSSASSREE 379 VGL+ RRN+C++PAV + RE Sbjct: 132 ELGTPGAAPLQPISKTTESEDPPYIGKDMARDGYILGVGLSARRNMCINPAVYNQPDRER 191 Query: 380 ADALCRSMTASWAR 421 D CR +TA W R Sbjct: 192 IDEACRQLTAPWVR 205 [81][TOP] >UniRef100_B5E1L9 GA25100 n=2 Tax=pseudoobscura subgroup RepID=B5E1L9_DROPS Length = 769 Score = 141 bits (355), Expect = 3e-32 Identities = 70/146 (47%), Positives = 100/146 (68%), Gaps = 2/146 (1%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPE-LAKL 178 YFPYE++YPEQYAYM++LKRTLDA+GH +LEMP+GTGKT TLLSLI++Y + PE + KL Sbjct: 11 YFPYEYIYPEQYAYMLELKRTLDAKGHCLLEMPSGTGKTATLLSLIVAYMIEHPETIRKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDK-CFAEDAPARAAASRKTLAVGLTTRRNLCLHPAV 355 +YC+RTV E++KV+ EL+ ++ + ++ C A + L++R+NLC+HP V Sbjct: 71 IYCSRTVPEIEKVIAELQNLMVYYERECVKPPA---------MTGLVLSSRKNLCIHPEV 121 Query: 356 SSASSREEADALCRSMTASWARGDPE 433 S + D C +TAS+ R E Sbjct: 122 SKEREGKAVDGKCYGLTASYIRDKHE 147 [82][TOP] >UniRef100_B8M0T2 TFIIH complex helicase Rad3, putative n=1 Tax=Talaromyces stipitatus ATCC 10500 RepID=B8M0T2_TALSN Length = 795 Score = 141 bits (355), Expect = 3e-32 Identities = 72/148 (48%), Positives = 97/148 (65%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQ+ YM DLK+ LDA GH +LEMP+GTGKTVTLLSLI++YQ + + KL+Y Sbjct: 12 FPYPKIYPEQWQYMCDLKKALDAGGHCVLEMPSGTGKTVTLLSLIVAYQQHHGDSRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E+DK L+EL+ ++ +R R +GL++R+NLCLHP+V Sbjct: 72 CSRTMSEIDKALHELKALMKYRALELGHTEDFR--------GLGLSSRKNLCLHPSVKRE 123 Query: 365 SSREEADALCRSMTASWARGDPEDIEDV 448 S DA CRS+TAS+ E EDV Sbjct: 124 KSGTVVDARCRSLTASFVAQKKERGEDV 151 [83][TOP] >UniRef100_B3RYU5 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RYU5_TRIAD Length = 720 Score = 140 bits (354), Expect = 3e-32 Identities = 66/141 (46%), Positives = 98/141 (69%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQY+YM +LKR LDA+GH LEMP+GTGKT++LLSLI++YQ +Y + KL Sbjct: 11 YFPYDYIYPEQYSYMCELKRALDAKGHCALEMPSGTGKTISLLSLIIAYQKVYPLHITKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++K L E++ +L + +K + +K L +GL+ R+NLC+HP +S Sbjct: 71 IYCSRTVPEIEKALEEMKILLEYYEK--------QTGEKQKFLGLGLSARKNLCIHPEIS 122 Query: 359 SASSREEADALCRSMTASWAR 421 + D C +TAS+ R Sbjct: 123 KERDGKVVDGRCLGLTASYVR 143 [84][TOP] >UniRef100_UPI0000D55A83 PREDICTED: similar to Xeroderma pigmentosum D CG9433-PA n=1 Tax=Tribolium castaneum RepID=UPI0000D55A83 Length = 759 Score = 140 bits (353), Expect = 5e-32 Identities = 67/141 (47%), Positives = 100/141 (70%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRP-ELAKL 178 YFPY+++YPEQYAYM +LKR LDA+GH +LEMP+GTGKT T+LSL+++Y L P ++ KL Sbjct: 11 YFPYDYIYPEQYAYMCELKRALDAKGHCLLEMPSGTGKTTTILSLVVAYMLEHPHDVRKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ EL+++L + +K E L + L++R+NLC+HP VS Sbjct: 71 IYCSRTVPEIEKVMEELKKLLEYYEKLDGE--------YPHLLGLVLSSRKNLCIHPEVS 122 Query: 359 SASSREEADALCRSMTASWAR 421 + + D C ++TAS+ R Sbjct: 123 TEREGKIVDGKCHALTASYIR 143 [85][TOP] >UniRef100_B3MDT0 GF11940 n=1 Tax=Drosophila ananassae RepID=B3MDT0_DROAN Length = 770 Score = 139 bits (351), Expect = 8e-32 Identities = 67/141 (47%), Positives = 98/141 (69%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPE-LAKL 178 YFPYE++YPEQYAYM++LKR+LDA+GH +LEMP+GTGKT TLLSLI++Y + PE + KL Sbjct: 11 YFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYMVEYPETVRKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ EL+ ++A+ ++ P L++R+N+C+HP VS Sbjct: 71 IYCSRTVPEIEKVIAELQNLMAYYERNCPNPPPFTGLV--------LSSRKNMCIHPEVS 122 Query: 359 SASSREEADALCRSMTASWAR 421 + D C +TAS+ R Sbjct: 123 KEREGKAVDGKCYGLTASYIR 143 [86][TOP] >UniRef100_B7P2J8 DNA repair helicase rad3/xp-D, putative n=1 Tax=Ixodes scapularis RepID=B7P2J8_IXOSC Length = 758 Score = 139 bits (350), Expect = 1e-31 Identities = 70/137 (51%), Positives = 95/137 (69%), Gaps = 1/137 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPEL-AKL 178 +FPYE++YPEQY+YM++LK+ LDA+GH +LEMP+GTGKTVTLLSLILSY P + +KL Sbjct: 12 FFPYEYIYPEQYSYMLELKQCLDAKGHGVLEMPSGTGKTVTLLSLILSYIKANPAMVSKL 71 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RT+ E++KV+ ELRR+L H K ED L + L++R+NLC+HP VS Sbjct: 72 IYCSRTLPEIEKVVEELRRLLKHYHKETGED--------MNVLGLCLSSRKNLCIHPEVS 123 Query: 359 SASSREEADALCRSMTA 409 D C +TA Sbjct: 124 KERDGHVVDGKCYLLTA 140 [87][TOP] >UniRef100_B4P9G5 GE12176 n=1 Tax=Drosophila yakuba RepID=B4P9G5_DROYA Length = 769 Score = 139 bits (350), Expect = 1e-31 Identities = 66/141 (46%), Positives = 97/141 (68%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPE-LAKL 178 YFPYE++YPEQYAYM++LKR+LDA+GH +LEMP+GTGKT TLLSLI++Y + PE + KL Sbjct: 11 YFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYMVEHPETVRKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ EL+ ++ + ++ P L++R+N+C+HP VS Sbjct: 71 IYCSRTVPEIEKVIAELQNLMVYYERNCPNPPPLTGLV--------LSSRKNMCIHPEVS 122 Query: 359 SASSREEADALCRSMTASWAR 421 + D C +TAS+ R Sbjct: 123 KEREGKAVDGKCYGLTASYIR 143 [88][TOP] >UniRef100_B3NJP2 GG22096 n=1 Tax=Drosophila erecta RepID=B3NJP2_DROER Length = 769 Score = 139 bits (350), Expect = 1e-31 Identities = 66/141 (46%), Positives = 97/141 (68%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPE-LAKL 178 YFPYE++YPEQYAYM++LKR+LDA+GH +LEMP+GTGKT TLLSLI++Y + PE + KL Sbjct: 11 YFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYMVEHPETVRKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ EL+ ++ + ++ P L++R+N+C+HP VS Sbjct: 71 IYCSRTVPEIEKVIAELQNLMVYYERQCPNPPPLTGLV--------LSSRKNMCIHPEVS 122 Query: 359 SASSREEADALCRSMTASWAR 421 + D C +TAS+ R Sbjct: 123 KEREGKAVDGKCYGLTASYIR 143 [89][TOP] >UniRef100_Q6CSU5 KLLA0C17776p n=1 Tax=Kluyveromyces lactis RepID=Q6CSU5_KLULA Length = 778 Score = 139 bits (350), Expect = 1e-31 Identities = 73/149 (48%), Positives = 96/149 (64%), Gaps = 2/149 (1%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQY YM D+K+TLDA G+SILEMP+GTGKTV+LLSL ++YQ++ PE K++Y Sbjct: 12 FPYPKIYPEQYQYMCDIKKTLDAGGNSILEMPSGTGKTVSLLSLTVAYQMHYPEHRKIIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDK--CFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 C+RT+ E++K L EL ++ +R K F ED +GLT+R+NLCLHP VS Sbjct: 72 CSRTMSEIEKALVELESLMDYRSKELGFVED----------FRGLGLTSRKNLCLHPRVS 121 Query: 359 SASSREEADALCRSMTASWARGDPEDIED 445 D CR MT AR E+ D Sbjct: 122 KERKGNVVDEKCRRMTNGQARKKKEENPD 150 [90][TOP] >UniRef100_Q7KVP9 Xeroderma pigmentosum D, isoform A n=3 Tax=Drosophila melanogaster RepID=Q7KVP9_DROME Length = 769 Score = 139 bits (349), Expect = 1e-31 Identities = 66/141 (46%), Positives = 97/141 (68%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPE-LAKL 178 YFPYE++YPEQYAYM++LKR+LDA+GH +LEMP+GTGKT TLLSLI++Y + PE + KL Sbjct: 11 YFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYMVEHPETVRKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ EL+ ++ + ++ P L++R+N+C+HP VS Sbjct: 71 IYCSRTVPEIEKVIAELQNLMVYYERHCPNPPPFTGLV--------LSSRKNMCIHPEVS 122 Query: 359 SASSREEADALCRSMTASWAR 421 + D C +TAS+ R Sbjct: 123 KEREGKAVDGKCYGLTASYIR 143 [91][TOP] >UniRef100_B4QFN4 GD11571 n=1 Tax=Drosophila simulans RepID=B4QFN4_DROSI Length = 769 Score = 139 bits (349), Expect = 1e-31 Identities = 66/141 (46%), Positives = 97/141 (68%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPE-LAKL 178 YFPYE++YPEQYAYM++LKR+LDA+GH +LEMP+GTGKT TLLSLI++Y + PE + KL Sbjct: 11 YFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYMVEHPETVRKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ EL+ ++ + ++ P L++R+N+C+HP VS Sbjct: 71 IYCSRTVPEIEKVIAELQNLMVYYERHCPNPPPFTGLV--------LSSRKNMCIHPEVS 122 Query: 359 SASSREEADALCRSMTASWAR 421 + D C +TAS+ R Sbjct: 123 KEREGKAVDGKCYGLTASYIR 143 [92][TOP] >UniRef100_B4LMQ6 GJ20544 n=1 Tax=Drosophila virilis RepID=B4LMQ6_DROVI Length = 769 Score = 139 bits (349), Expect = 1e-31 Identities = 66/141 (46%), Positives = 97/141 (68%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPE-LAKL 178 YFPYE++YPEQYAYM++LKR+LDA+GH +LEMP+GTGKT TLLSLI++Y + PE + KL Sbjct: 11 YFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYMIEHPETVRKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ EL+ ++ + D+ + L++R+N+C+HP VS Sbjct: 71 IYCSRTVPEIEKVIAELQNLMVYYDR--------HCPVPPGLTGLVLSSRKNMCIHPEVS 122 Query: 359 SASSREEADALCRSMTASWAR 421 + D C +TAS+ R Sbjct: 123 KEREGKAVDGKCYGLTASYIR 143 [93][TOP] >UniRef100_B4I7L3 GM15813 n=1 Tax=Drosophila sechellia RepID=B4I7L3_DROSE Length = 769 Score = 139 bits (349), Expect = 1e-31 Identities = 66/141 (46%), Positives = 97/141 (68%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPE-LAKL 178 YFPYE++YPEQYAYM++LKR+LDA+GH +LEMP+GTGKT TLLSLI++Y + PE + KL Sbjct: 11 YFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYMVEHPETVRKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ EL+ ++ + ++ P L++R+N+C+HP VS Sbjct: 71 IYCSRTVPEIEKVIAELQNLMVYYERHCPNPPPFTGLV--------LSSRKNMCIHPEVS 122 Query: 359 SASSREEADALCRSMTASWAR 421 + D C +TAS+ R Sbjct: 123 KEREGKAVDGKCYGLTASYIR 143 [94][TOP] >UniRef100_Q6FKF8 Similar to uniprot|P06839 Saccharomyces cerevisiae YER171w DNA helicase/ATPase n=1 Tax=Candida glabrata RepID=Q6FKF8_CANGA Length = 775 Score = 137 bits (345), Expect = 4e-31 Identities = 72/147 (48%), Positives = 95/147 (64%), Gaps = 4/147 (2%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQY YM D+KRTLDA G+SILEMP+GTGKTV+LLSL ++YQ++ PE K++Y Sbjct: 12 FPYPKIYPEQYQYMRDIKRTLDAGGNSILEMPSGTGKTVSLLSLTIAYQMHYPEHRKIIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL ++ +R K + +GLT+R+NLCLHP VS Sbjct: 72 CSRTMSEIEKALVELENLMDYRAK--------ELGFKEEFRGLGLTSRKNLCLHPEVSKE 123 Query: 365 SSREEADALCRSMTASWAR----GDPE 433 S D CR MT A+ DPE Sbjct: 124 RSGTIVDEKCRRMTNGQAKKKLEEDPE 150 [95][TOP] >UniRef100_Q5BXU3 SJCHGC01374 protein (Fragment) n=1 Tax=Schistosoma japonicum RepID=Q5BXU3_SCHJA Length = 226 Score = 137 bits (344), Expect = 5e-31 Identities = 69/141 (48%), Positives = 98/141 (69%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELA-KL 178 YFPYE++YPEQY YM++LKRTLDA+GH +LEMP+GTGKTV+LLSLI++Y RP + K Sbjct: 11 YFPYEYIYPEQYHYMIELKRTLDAKGHGVLEMPSGTGKTVSLLSLIVAYMKARPGIVEKF 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 VYC+RTV E++KV+ EL+ + DK +A++ + L + L++R+NLC+H V Sbjct: 71 VYCSRTVPELEKVIDELKVL----DKYYADETNEKGCG---LLGIILSSRKNLCIHRDVK 123 Query: 359 SASSREEADALCRSMTASWAR 421 A D+ C +TAS+ R Sbjct: 124 HAGDGAAVDSACFRLTASFVR 144 [96][TOP] >UniRef100_Q0IGE4 DNA repair helicase rad3/xp-d n=1 Tax=Aedes aegypti RepID=Q0IGE4_AEDAE Length = 760 Score = 136 bits (343), Expect = 7e-31 Identities = 66/141 (46%), Positives = 96/141 (68%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELA-KL 178 YFPYE++YPEQYAYM++LKRT DA+GH +LEMP+GTGKT TLLSLI++Y + P + KL Sbjct: 11 YFPYEYIYPEQYAYMLELKRTFDAKGHCLLEMPSGTGKTTTLLSLIVAYIMENPHIVRKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ EL+ ++ + +K + + L++R+N+C+H VS Sbjct: 71 IYCSRTVPEIEKVIAELKHLMNYYEK--------QTGVMPNITGLVLSSRKNMCIHSEVS 122 Query: 359 SASSREEADALCRSMTASWAR 421 + DA C MTAS+ R Sbjct: 123 KERDGKIVDAKCYGMTASYVR 143 [97][TOP] >UniRef100_B0XHE1 TFIIH basal transcription factor complex helicase subunit n=1 Tax=Culex quinquefasciatus RepID=B0XHE1_CULQU Length = 542 Score = 136 bits (343), Expect = 7e-31 Identities = 66/141 (46%), Positives = 96/141 (68%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELA-KL 178 YFPYE++YPEQYAYM++LKRT DA+GH +LEMP+GTGKT TLLSLI++Y + P + KL Sbjct: 56 YFPYEYIYPEQYAYMLELKRTFDAKGHCLLEMPSGTGKTTTLLSLIVAYIMENPHIVRKL 115 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ EL+ ++ + +K + + L++R+N+C+H VS Sbjct: 116 IYCSRTVPEIEKVIAELKHLMNYYEK--------QTGVMPNITGLVLSSRKNMCIHSEVS 167 Query: 359 SASSREEADALCRSMTASWAR 421 + DA C MTAS+ R Sbjct: 168 KERDGKIVDAKCYGMTASYVR 188 [98][TOP] >UniRef100_B7FRR5 Xeroderma pigmentosum group D complementing protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FRR5_PHATR Length = 782 Score = 136 bits (342), Expect = 9e-31 Identities = 74/147 (50%), Positives = 93/147 (63%), Gaps = 9/147 (6%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 +FPY+ +Y EQ+ YM LK++LDA GH +LEMPTGTGKTV LLSLI SYQ P KLV Sbjct: 11 FFPYDRIYLEQHQYMRALKQSLDAGGHCLLEMPTGTGKTVCLLSLITSYQFANPSAGKLV 70 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAED-----APARAAASRKTLAVG----LTTRRN 334 YCTRTV EM+ V+ EL VLA+R + P + + V L++RRN Sbjct: 71 YCTRTVPEMNHVMEELATVLAYRSQELQRHQEENILPMDTDGDIENVPVAGTLCLSSRRN 130 Query: 335 LCLHPAVSSASSREEADALCRSMTASW 415 +C+H V + S RE DA CRS+TASW Sbjct: 131 MCVHERVMAESDREAVDAACRSLTASW 157 [99][TOP] >UniRef100_C5DRW3 ZYRO0B11836p n=1 Tax=Zygosaccharomyces rouxii CBS 732 RepID=C5DRW3_ZYGRC Length = 770 Score = 136 bits (342), Expect = 9e-31 Identities = 70/143 (48%), Positives = 93/143 (65%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQY YM DLKRTLD+ G+SILEMP+GTGKTV+LLSL ++YQ++ PE K++Y Sbjct: 12 FPYPKIYPEQYHYMCDLKRTLDSGGNSILEMPSGTGKTVSLLSLTIAYQMHYPEHRKIIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL ++ +R K R +GLT+R+NLCLHP VS Sbjct: 72 CSRTMSEIEKALVELENLMDYRTKELGYREDFR--------GLGLTSRKNLCLHPQVSKE 123 Query: 365 SSREEADALCRSMTASWARGDPE 433 + D CR MT A+ E Sbjct: 124 RNGTLVDEKCRRMTNGQAKHKQE 146 [100][TOP] >UniRef100_A7TH08 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TH08_VANPO Length = 776 Score = 136 bits (342), Expect = 9e-31 Identities = 72/149 (48%), Positives = 97/149 (65%), Gaps = 6/149 (4%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQY YM D+K+TLDA G+SILEMP+GTGKTV+LLSL ++YQ++ PE K++Y Sbjct: 12 FPYPKIYPEQYHYMCDMKKTLDAGGNSILEMPSGTGKTVSLLSLTVAYQMHYPEHRKIIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDK--CFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 C+RT+ E++K L EL ++ +R + +AED +GLT+R+NLCLHP VS Sbjct: 72 CSRTMSEIEKALIELENLMDYRSRELGYAED----------FRGLGLTSRKNLCLHPQVS 121 Query: 359 SASSREEADALCRSMTASWAR----GDPE 433 D CR MT A+ DPE Sbjct: 122 KERKGTVVDEKCRRMTNGQAKRKLESDPE 150 [101][TOP] >UniRef100_A2Y0B7 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=A2Y0B7_ORYSI Length = 734 Score = 135 bits (339), Expect = 2e-30 Identities = 70/127 (55%), Positives = 88/127 (69%), Gaps = 1/127 (0%) Frame = +2 Query: 44 MVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELA-KLVYCTRTVGEMDKVL 220 M +LKR LDARGH++LEMPTGTGKT L+SLI SY L P +L+YCTRTV EM+K L Sbjct: 1 MGELKRALDARGHALLEMPTGTGKTAALISLITSYSLASPSRPLRLIYCTRTVHEMEKTL 60 Query: 221 YELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSASSREEADALCRS 400 ELR + AH AAASR LA+GL++R+NLC+HP S+A++R+ D CR Sbjct: 61 AELRLLFAHLP----------AAASRSLLALGLSSRKNLCVHPQASAAAARDSVDTACRR 110 Query: 401 MTASWAR 421 +TASW R Sbjct: 111 LTASWVR 117 [102][TOP] >UniRef100_B4E0F6 cDNA FLJ57462, highly similar to TFIIH basal transcription factor complex helicase subunit (EC 3.6.1.-) n=1 Tax=Homo sapiens RepID=B4E0F6_HUMAN Length = 127 Score = 134 bits (338), Expect = 2e-30 Identities = 65/124 (52%), Positives = 94/124 (75%), Gaps = 1/124 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQ++YM +LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL Sbjct: 11 YFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L +K E P L + L++R+NLC+HP + Sbjct: 71 IYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLP--------FLGLALSSRKNLCIHPETT 122 Query: 359 SASS 370 SAS+ Sbjct: 123 SAST 126 [103][TOP] >UniRef100_B3LRT0 DNA repair helicase RAD3 n=2 Tax=Saccharomyces cerevisiae RepID=B3LRT0_YEAS1 Length = 780 Score = 134 bits (338), Expect = 2e-30 Identities = 70/147 (47%), Positives = 93/147 (63%), Gaps = 4/147 (2%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQY YM D+K+TLD G+SILEMP+GTGKTV+LLSL ++YQ++ PE K++Y Sbjct: 12 FPYPKIYPEQYNYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQMHYPEHRKIIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL ++ +R K R +GLT+R+NLCLHP VS Sbjct: 72 CSRTMSEIEKALVELENLMDYRTKELGYQEDFR--------GLGLTSRKNLCLHPEVSKE 123 Query: 365 SSREEADALCRSMTASWAR----GDPE 433 D CR MT A+ DPE Sbjct: 124 RKGTVVDEKCRRMTNGQAKRKLEEDPE 150 [104][TOP] >UniRef100_P06839 DNA repair helicase RAD3 n=4 Tax=Saccharomyces cerevisiae RepID=RAD3_YEAST Length = 778 Score = 134 bits (338), Expect = 2e-30 Identities = 70/147 (47%), Positives = 93/147 (63%), Gaps = 4/147 (2%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQY YM D+K+TLD G+SILEMP+GTGKTV+LLSL ++YQ++ PE K++Y Sbjct: 12 FPYPKIYPEQYNYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQMHYPEHRKIIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL ++ +R K R +GLT+R+NLCLHP VS Sbjct: 72 CSRTMSEIEKALVELENLMDYRTKELGYQEDFR--------GLGLTSRKNLCLHPEVSKE 123 Query: 365 SSREEADALCRSMTASWAR----GDPE 433 D CR MT A+ DPE Sbjct: 124 RKGTVVDEKCRRMTNGQAKRKLEEDPE 150 [105][TOP] >UniRef100_UPI0000E4A853 PREDICTED: similar to TFIIH basal transcription factor complex helicase subunit (DNA-repair protein complementing XP-D cells) (Xeroderma pigmentosum group D-complementing protein) (CXPD) (DNA excision repair protein ERCC-2) n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A853 Length = 668 Score = 133 bits (335), Expect = 6e-30 Identities = 64/141 (45%), Positives = 99/141 (70%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRP-ELAKL 178 +FPY+++YPEQ+ YM++LK+ LDA+GH +LEMP+GTGKTV+LL+LI++Y P EL KL Sbjct: 11 HFPYDYIYPEQFMYMMELKKLLDAKGHGVLEMPSGTGKTVSLLALIVAYIQANPHELTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++K + ELRR+L + ++ + + + L++R+NLC+HP VS Sbjct: 71 IYCSRTVPEIEKAVEELRRLLDYIEE--------QTGEKPNFVGLALSSRKNLCIHPEVS 122 Query: 359 SASSREEADALCRSMTASWAR 421 + D+ C S+TAS+ R Sbjct: 123 KERIGKVVDSKCHSLTASYIR 143 [106][TOP] >UniRef100_UPI0000E487BC PREDICTED: similar to TFIIH basal transcription factor complex helicase subunit (DNA-repair protein complementing XP-D cells) (Xeroderma pigmentosum group D-complementing protein) (CXPD) (DNA excision repair protein ERCC-2), partial n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E487BC Length = 683 Score = 133 bits (335), Expect = 6e-30 Identities = 64/141 (45%), Positives = 99/141 (70%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRP-ELAKL 178 +FPY+++YPEQ+ YM++LK+ LDA+GH +LEMP+GTGKTV+LL+LI++Y P EL KL Sbjct: 11 HFPYDYIYPEQFMYMMELKKLLDAKGHGVLEMPSGTGKTVSLLALIVAYIQANPHELTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++K + ELRR+L + ++ + + + L++R+NLC+HP VS Sbjct: 71 IYCSRTVPEIEKAVEELRRLLDYIEE--------QTGEKPNFVGLALSSRKNLCIHPEVS 122 Query: 359 SASSREEADALCRSMTASWAR 421 + D+ C S+TAS+ R Sbjct: 123 KERIGKVVDSKCHSLTASYIR 143 [107][TOP] >UniRef100_UPI0000584833 PREDICTED: similar to Excision repair cross-complementing rodent repair deficiency, complementation group 2, partial n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000584833 Length = 274 Score = 133 bits (335), Expect = 6e-30 Identities = 64/141 (45%), Positives = 99/141 (70%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRP-ELAKL 178 +FPY+++YPEQ+ YM++LK+ LDA+GH +LEMP+GTGKTV+LL+LI++Y P EL KL Sbjct: 13 HFPYDYIYPEQFMYMMELKKLLDAKGHGVLEMPSGTGKTVSLLALIVAYIQANPHELTKL 72 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++K + ELRR+L + ++ + + + L++R+NLC+HP VS Sbjct: 73 IYCSRTVPEIEKAVEELRRLLDYIEE--------QTGEKPNFVGLALSSRKNLCIHPEVS 124 Query: 359 SASSREEADALCRSMTASWAR 421 + D+ C S+TAS+ R Sbjct: 125 KERIGKVVDSKCHSLTASYIR 145 [108][TOP] >UniRef100_Q74ZT4 AGR114Cp n=1 Tax=Eremothecium gossypii RepID=Q74ZT4_ASHGO Length = 774 Score = 132 bits (333), Expect = 9e-30 Identities = 70/147 (47%), Positives = 93/147 (63%), Gaps = 4/147 (2%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQY YM D+K+TLDA G+SILEMP+GTGKTV+LL+L ++YQ++ E K++Y Sbjct: 12 FPYPKIYPEQYQYMCDIKKTLDAGGNSILEMPSGTGKTVSLLALTVAYQMHYKEHRKIIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL ++ +R K R +GLT+R+NLCLHP VS Sbjct: 72 CSRTMSEIEKALVELESLMDYRAKELQYQEEFR--------GLGLTSRKNLCLHPRVSKE 123 Query: 365 SSREEADALCRSMTASWARG----DPE 433 D CR MT AR DPE Sbjct: 124 RKGTVVDEKCRRMTNGQARARKQQDPE 150 [109][TOP] >UniRef100_C5MFW3 DNA repair helicase RAD3 n=1 Tax=Candida tropicalis MYA-3404 RepID=C5MFW3_CANTT Length = 781 Score = 132 bits (332), Expect = 1e-29 Identities = 65/134 (48%), Positives = 89/134 (66%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM D+K+TLD G+ ILEMP+GTGKTV+LLSL ++YQ++ PE K+VY Sbjct: 12 FPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQMHYPEHRKIVY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL +++ +R E R +GLT+R+NLCLHP +S Sbjct: 72 CSRTMSEIEKALIELHKLMEYRANELGEVEDFR--------GLGLTSRKNLCLHPTISKE 123 Query: 365 SSREEADALCRSMT 406 D CR +T Sbjct: 124 RKGVVVDEKCRRIT 137 [110][TOP] >UniRef100_Q57YJ9 TFIIH basal transcription factor complex helicase subunit, putative n=1 Tax=Trypanosoma brucei RepID=Q57YJ9_9TRYP Length = 819 Score = 131 bits (330), Expect = 2e-29 Identities = 67/138 (48%), Positives = 89/138 (64%), Gaps = 1/138 (0%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSY-QLYRPELAKLV 181 FPYE++YPEQ YM +LK+ LD GH +LEMP+GTGKT TLLSL+++Y + E K+V Sbjct: 28 FPYEYIYPEQLEYMTELKKGLDQGGHMVLEMPSGTGKTTTLLSLLIAYLHHHADEKRKVV 87 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 YCTRTVGE+DK ELR++L + SR V LT ++NLC+ P+V S Sbjct: 88 YCTRTVGEVDKTASELRKILGLWE--------TEEVGSRPLRGVCLTAKKNLCIEPSVVS 139 Query: 362 ASSREEADALCRSMTASW 415 ++ DA CRS+TA W Sbjct: 140 RRHLDDVDAGCRSLTAPW 157 [111][TOP] >UniRef100_C9ZW71 TFIIH basal transcription factor complex helicase subunit, putative n=1 Tax=Trypanosoma brucei gambiense DAL972 RepID=C9ZW71_TRYBG Length = 819 Score = 131 bits (330), Expect = 2e-29 Identities = 67/138 (48%), Positives = 89/138 (64%), Gaps = 1/138 (0%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSY-QLYRPELAKLV 181 FPYE++YPEQ YM +LK+ LD GH +LEMP+GTGKT TLLSL+++Y + E K+V Sbjct: 28 FPYEYIYPEQLEYMTELKKGLDQGGHMVLEMPSGTGKTTTLLSLLIAYLHHHADEKRKVV 87 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 YCTRTVGE+DK ELR++L + SR V LT ++NLC+ P+V S Sbjct: 88 YCTRTVGEVDKTASELRKILGLWE--------TEEVGSRPLRGVCLTAKKNLCIEPSVVS 139 Query: 362 ASSREEADALCRSMTASW 415 ++ DA CRS+TA W Sbjct: 140 RRHLDDVDAGCRSLTAPW 157 [112][TOP] >UniRef100_UPI0000E25266 PREDICTED: excision repair cross-complementing rodent repair deficiency, complementation group 2 protein isoform 3 n=1 Tax=Pan troglodytes RepID=UPI0000E25266 Length = 691 Score = 131 bits (329), Expect = 3e-29 Identities = 63/123 (51%), Positives = 92/123 (74%), Gaps = 1/123 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQ++YM +LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL Sbjct: 20 YFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKL 79 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L +K E P L + L++R+NLC+HP + Sbjct: 80 IYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLP--------FLGLALSSRKNLCIHPEIL 131 Query: 359 SAS 367 A+ Sbjct: 132 HAN 134 [113][TOP] >UniRef100_UPI0000E25265 PREDICTED: excision repair cross-complementing rodent repair deficiency, complementation group 2 protein isoform 2 n=1 Tax=Pan troglodytes RepID=UPI0000E25265 Length = 682 Score = 131 bits (329), Expect = 3e-29 Identities = 63/123 (51%), Positives = 92/123 (74%), Gaps = 1/123 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQ++YM +LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL Sbjct: 11 YFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L +K E P L + L++R+NLC+HP + Sbjct: 71 IYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLP--------FLGLALSSRKNLCIHPEIL 122 Query: 359 SAS 367 A+ Sbjct: 123 HAN 125 [114][TOP] >UniRef100_UPI00015DF9D6 TFIIH basal transcription factor complex helicase subunit (EC 3.6.1.-) (DNA-repair protein complementing XP-D cells) (Xeroderma pigmentosum group D-complementing protein) (CXPD) (DNA excision repair protein ERCC-2). n=1 Tax=Homo sapiens RepID=UPI00015DF9D6 Length = 682 Score = 131 bits (329), Expect = 3e-29 Identities = 63/123 (51%), Positives = 92/123 (74%), Gaps = 1/123 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQ++YM +LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL Sbjct: 11 YFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L +K E P L + L++R+NLC+HP + Sbjct: 71 IYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLP--------FLGLALSSRKNLCIHPEIL 122 Query: 359 SAS 367 A+ Sbjct: 123 HAN 125 [115][TOP] >UniRef100_Q2TB79 ERCC2 protein n=1 Tax=Homo sapiens RepID=Q2TB79_HUMAN Length = 682 Score = 131 bits (329), Expect = 3e-29 Identities = 63/123 (51%), Positives = 92/123 (74%), Gaps = 1/123 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKL 178 YFPY+++YPEQ++YM +LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL Sbjct: 11 YFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR++L +K E P L + L++R+NLC+HP + Sbjct: 71 IYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLP--------FLGLALSSRKNLCIHPEIL 122 Query: 359 SAS 367 A+ Sbjct: 123 HAN 125 [116][TOP] >UniRef100_C4YT76 DNA repair helicase RAD3 n=1 Tax=Candida albicans RepID=C4YT76_CANAL Length = 701 Score = 131 bits (329), Expect = 3e-29 Identities = 65/134 (48%), Positives = 88/134 (65%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM D+K+TLD G+ ILEMP+GTGKTV+LLSL ++YQ++ PE K+VY Sbjct: 12 FPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQMHYPEHRKIVY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL +++ R E R +GLT+R+NLCLHP +S Sbjct: 72 CSRTMSEIEKALIELHKLMEFRANELGEVEDFR--------GLGLTSRKNLCLHPTISKE 123 Query: 365 SSREEADALCRSMT 406 D CR +T Sbjct: 124 RKGVVVDEKCRRIT 137 [117][TOP] >UniRef100_B9WJN1 DNA repair helicase Rad3 homologue, putative (5' to 3' dna helicase, putative) (Transcription initiation factor tfiih subunit, putative) n=1 Tax=Candida dubliniensis CD36 RepID=B9WJN1_CANDC Length = 781 Score = 131 bits (329), Expect = 3e-29 Identities = 65/134 (48%), Positives = 88/134 (65%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM D+K+TLD G+ ILEMP+GTGKTV+LLSL ++YQ++ PE K+VY Sbjct: 12 FPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQMHYPEHRKIVY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL +++ R E R +GLT+R+NLCLHP +S Sbjct: 72 CSRTMSEIEKALIELHKLMEFRANELGEVEDFR--------GLGLTSRKNLCLHPTISKE 123 Query: 365 SSREEADALCRSMT 406 D CR +T Sbjct: 124 RKGVVVDEKCRRIT 137 [118][TOP] >UniRef100_A8Q7Q2 Probable DNA helicase ERCC2/XPD-southern platyfish, putative n=1 Tax=Brugia malayi RepID=A8Q7Q2_BRUMA Length = 763 Score = 130 bits (327), Expect = 5e-29 Identities = 64/140 (45%), Positives = 95/140 (67%), Gaps = 1/140 (0%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPE-LAKLV 181 FPY+++YPEQ YM +LK+TLDA+GH +LEMP+GTGKTV+LLSL+++Y L P+ L KLV Sbjct: 7 FPYDYIYPEQILYMSELKKTLDAKGHCLLEMPSGTGKTVSLLSLVIAYMLRFPDHLDKLV 66 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 YC+RT+ E++K + ELR + + ++C + AV L+ R+NLC++ +VSS Sbjct: 67 YCSRTIPEIEKCVEELRNLFKYYEQCDGKPP--------SLFAVALSARKNLCINESVSS 118 Query: 362 ASSREEADALCRSMTASWAR 421 D C+ +TAS+ R Sbjct: 119 LRQGSLVDGACQKLTASFVR 138 [119][TOP] >UniRef100_C4YAD8 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4YAD8_CLAL4 Length = 439 Score = 130 bits (327), Expect = 5e-29 Identities = 64/134 (47%), Positives = 88/134 (65%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM D+K+TLD G+ ILEMP+GTGKTV+LLSL ++YQ++ PE K+VY Sbjct: 12 FPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQMHYPEHRKIVY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL ++ +R + + +GLT+R+NLCLHP VS Sbjct: 72 CSRTMSEIEKALVELHSLMEYR--------ASELGYVEEFRGLGLTSRKNLCLHPTVSKE 123 Query: 365 SSREEADALCRSMT 406 D CR +T Sbjct: 124 RKGAVVDEKCRRLT 137 [120][TOP] >UniRef100_UPI000179185E PREDICTED: similar to DNA repair helicase rad3/xp-d n=1 Tax=Acyrthosiphon pisum RepID=UPI000179185E Length = 756 Score = 130 bits (326), Expect = 6e-29 Identities = 69/149 (46%), Positives = 99/149 (66%), Gaps = 1/149 (0%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQL-YRPELAKLV 181 FPYE++YPEQYAYMV+LK+ +DA+GH +LEMP+GTGKT+T+LSLI++Y + Y +L KL+ Sbjct: 12 FPYEYIYPEQYAYMVELKKAIDAKGHCLLEMPSGTGKTITILSLIVAYMIKYPAKLGKLL 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 Y TRT+ E++K EL RVL K DA L V L++R+NLC++P+++ Sbjct: 72 YSTRTLSEIEKAAEEL-RVLCDYYKSNKYDA--------NVLGVVLSSRKNLCVNPSIAG 122 Query: 362 ASSREEADALCRSMTASWARGDPEDIEDV 448 + DA C ++TA + R D E V Sbjct: 123 EHNGRVVDARCHALTAPFVRARHADGEAV 151 [121][TOP] >UniRef100_Q5AFE9 Putative uncharacterized protein CaJ7.0007 n=1 Tax=Candida albicans RepID=Q5AFE9_CANAL Length = 765 Score = 130 bits (326), Expect = 6e-29 Identities = 64/134 (47%), Positives = 88/134 (65%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQY+YM D+K+TLD G+ ILEMP+GTGKTV+LLSL ++YQ++ PE K+VY Sbjct: 12 FPYPRIYPEQYSYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQMHYPEHRKIVY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL +++ R E R +GLT+R+NLCLHP +S Sbjct: 72 CSRTMSEIEKALIELHKLMEFRANELGEVEDFR--------GLGLTSRKNLCLHPTISKE 123 Query: 365 SSREEADALCRSMT 406 D CR +T Sbjct: 124 RKGVVVDEKCRRIT 137 [122][TOP] >UniRef100_Q1E236 Putative uncharacterized protein n=1 Tax=Coccidioides immitis RepID=Q1E236_COCIM Length = 757 Score = 130 bits (326), Expect = 6e-29 Identities = 63/122 (51%), Positives = 86/122 (70%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAY+ DLK+TLD GH +LEMP+GTGKTV+LLSLI++YQ + P KL+Y Sbjct: 12 FPYPRIYPEQYAYICDLKKTLDVGGHCVLEMPSGTGKTVSLLSLIIAYQQHYPSHRKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L ELR ++ +R++ R A+GLT+R+NLCLHP+V Sbjct: 72 CSRTMSEIEKALTELRELMKYREQQLGYTEDFR--------ALGLTSRKNLCLHPSVRRE 123 Query: 365 SS 370 S Sbjct: 124 KS 125 [123][TOP] >UniRef100_UPI000151B059 conserved hypothetical protein n=1 Tax=Pichia guilliermondii ATCC 6260 RepID=UPI000151B059 Length = 843 Score = 129 bits (325), Expect = 8e-29 Identities = 63/136 (46%), Positives = 91/136 (66%), Gaps = 2/136 (1%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM D+K+TLD G+ ILEMP+GTGKT++LLSL ++YQ++ PE K+VY Sbjct: 65 FPYPRIYPEQYAYMSDIKKTLDVGGNCILEMPSGTGKTISLLSLTVAYQMHYPEHRKIVY 124 Query: 185 CTRTVGEMDKVLYELRRVLAHR--DKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 C+RT+ E++K L EL +++ +R + + ED +GLT+R+NLC+HP +S Sbjct: 125 CSRTMSEIEKALIELHKLMEYRAEELGYVED----------FRGLGLTSRKNLCIHPTIS 174 Query: 359 SASSREEADALCRSMT 406 D CR +T Sbjct: 175 KERKGNVVDEKCRRIT 190 [124][TOP] >UniRef100_Q2GP16 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2GP16_CHAGB Length = 732 Score = 129 bits (325), Expect = 8e-29 Identities = 67/136 (49%), Positives = 90/136 (66%) Frame = +2 Query: 41 YMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVYCTRTVGEMDKVL 220 YMVDLK+TLDA G+ +LEMP+GTGKTVTLLSLI++YQ Y P KL+YC+RT+ E++K L Sbjct: 7 YMVDLKKTLDAGGNCVLEMPSGTGKTVTLLSLIVAYQQYYPSHRKLIYCSRTMSEIEKAL 66 Query: 221 YELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSASSREEADALCRS 400 EL+ ++ R + + R +GLT+R+NLCLHP+V S DA CRS Sbjct: 67 VELKALMKFRTERLGHEEEFR--------GLGLTSRKNLCLHPSVRREKSGNVVDARCRS 118 Query: 401 MTASWARGDPEDIEDV 448 +TA + + E EDV Sbjct: 119 LTAGFVKEKKEKGEDV 134 [125][TOP] >UniRef100_A5DM02 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii RepID=A5DM02_PICGU Length = 843 Score = 129 bits (325), Expect = 8e-29 Identities = 63/136 (46%), Positives = 91/136 (66%), Gaps = 2/136 (1%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM D+K+TLD G+ ILEMP+GTGKT++LLSL ++YQ++ PE K+VY Sbjct: 65 FPYPRIYPEQYAYMSDIKKTLDVGGNCILEMPSGTGKTISLLSLTVAYQMHYPEHRKIVY 124 Query: 185 CTRTVGEMDKVLYELRRVLAHR--DKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 C+RT+ E++K L EL +++ +R + + ED +GLT+R+NLC+HP +S Sbjct: 125 CSRTMSEIEKALIELHKLMEYRAEELGYVED----------FRGLGLTSRKNLCIHPTIS 174 Query: 359 SASSREEADALCRSMT 406 D CR +T Sbjct: 175 KERKGNVVDEKCRRIT 190 [126][TOP] >UniRef100_Q4UGA8 Rad3-like DNA helicase-related, putative n=1 Tax=Theileria annulata RepID=Q4UGA8_THEAN Length = 894 Score = 129 bits (324), Expect = 1e-28 Identities = 75/176 (42%), Positives = 94/176 (53%), Gaps = 45/176 (25%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 YFPY +YPEQ AYM LK LD++GH++LEMPTGTGKTV L S + SYQL +PEL KLV Sbjct: 12 YFPYPKIYPEQIAYMKSLKNVLDSKGHAVLEMPTGTGKTVALFSFVSSYQLAKPELGKLV 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAED--APARAAASRKT----------------- 304 YCTRT+ EM+K L EL V+++R+ D + + S KT Sbjct: 72 YCTRTIHEMEKALNELSVVISYRNSQLNIDHSSTYEGSNSYKTSNNMNETNQNYIKNINS 131 Query: 305 --------------------------LAVGLTTRRNLCLHPAVSSASSREEADALC 394 LAVGL +RRNLC+HP VSS + R + D C Sbjct: 132 VKHMKEEKNVKIKVEQDVETPQNDHFLAVGLCSRRNLCIHPEVSSQADRTKIDEKC 187 [127][TOP] >UniRef100_C4R1T2 5' to 3' DNA helicase, involved in nucleotide excision repair and transcription n=1 Tax=Pichia pastoris GS115 RepID=C4R1T2_PICPG Length = 773 Score = 129 bits (324), Expect = 1e-28 Identities = 65/134 (48%), Positives = 87/134 (64%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM D+KRTLD G+ ILEMP+GTGKT++LLSL +SYQ++ PE K++Y Sbjct: 12 FPYPKIYPEQYAYMCDIKRTLDIGGNCILEMPSGTGKTISLLSLTVSYQMFYPEHRKIIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL +++ R K +GLT+R+NLCLHP +S Sbjct: 72 CSRTMSEIEKALIELTKLMDFRTK--------ELGVKENFRGLGLTSRKNLCLHP-ISQE 122 Query: 365 SSREEADALCRSMT 406 D CR MT Sbjct: 123 RKGIVVDEKCRRMT 136 [128][TOP] >UniRef100_C5JKG1 DNA repair helicase RAD3 n=1 Tax=Ajellomyces dermatitidis SLH14081 RepID=C5JKG1_AJEDS Length = 773 Score = 129 bits (323), Expect = 1e-28 Identities = 68/137 (49%), Positives = 93/137 (67%), Gaps = 2/137 (1%) Frame = +2 Query: 44 MVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVYCTRTVGEMDKVLY 223 M DLK+TLDA GH +LEMP+GTGKTV+LLSLI++YQ +RPE KL+YC+RT+ E++K L Sbjct: 1 MCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQQHRPEQRKLIYCSRTMSEIEKALA 60 Query: 224 ELRRVLAHRDK--CFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSASSREEADALCR 397 EL+ ++ +R + +AED +GLT+R+NLCLHP+V S DA CR Sbjct: 61 ELKALMKYRTRQLGYAED----------FRGLGLTSRKNLCLHPSVKREKSGAVVDARCR 110 Query: 398 SMTASWARGDPEDIEDV 448 S+TA + + E EDV Sbjct: 111 SLTAGFVKEKKERGEDV 127 [129][TOP] >UniRef100_C5DN55 KLTH0G14300p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DN55_LACTC Length = 782 Score = 129 bits (323), Expect = 1e-28 Identities = 65/134 (48%), Positives = 86/134 (64%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQY YM D+K+TLDA G+SILEMP+GTGKTV+LLSL ++YQ + E K++Y Sbjct: 12 FPYPKIYPEQYQYMCDIKKTLDAGGNSILEMPSGTGKTVSLLSLAVAYQTHYAEHRKIIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL ++ +R K R +GLT+R+NLCLHP V Sbjct: 72 CSRTMSEIEKALVELESLMDYRSKELGHKEHFR--------GLGLTSRKNLCLHPRVRKE 123 Query: 365 SSREEADALCRSMT 406 D CR MT Sbjct: 124 RKGTVVDEKCRRMT 137 [130][TOP] >UniRef100_A3M0P3 DNA helicase component of transcription factor b n=1 Tax=Pichia stipitis RepID=A3M0P3_PICST Length = 793 Score = 129 bits (323), Expect = 1e-28 Identities = 62/134 (46%), Positives = 87/134 (64%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM D+K+TLD G+ ILEMP+GTGKTV+LLSL ++YQ++ PE K+VY Sbjct: 12 FPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQMHYPEHRKIVY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL +++ R + +GLT+R+NLC+HP +S Sbjct: 72 CSRTMSEIEKALIELHKLMEFRS--------TELGYVEEFRGLGLTSRKNLCVHPTISQE 123 Query: 365 SSREEADALCRSMT 406 D CR +T Sbjct: 124 RKGNVVDEKCRRIT 137 [131][TOP] >UniRef100_A5DY73 Putative uncharacterized protein (Fragment) n=1 Tax=Lodderomyces elongisporus RepID=A5DY73_LODEL Length = 325 Score = 128 bits (322), Expect = 2e-28 Identities = 63/134 (47%), Positives = 88/134 (65%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM D+K+TLD G+ ILEMP+GTGKTV+LLSL ++YQ++ PE K+VY Sbjct: 12 FPYPKIYPEQYAYMSDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQMHYPEHRKIVY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL +++ R R +GLT+R+NLCL+P +S Sbjct: 72 CSRTMSEIEKALIELHKLMEFRASALGYVEDFR--------GLGLTSRKNLCLNPLISRE 123 Query: 365 SSREEADALCRSMT 406 D +CR +T Sbjct: 124 RKGNVVDEMCRRVT 137 [132][TOP] >UniRef100_A0CAB5 Chromosome undetermined scaffold_161, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0CAB5_PARTE Length = 722 Score = 128 bits (321), Expect = 2e-28 Identities = 70/140 (50%), Positives = 91/140 (65%), Gaps = 1/140 (0%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPE-LAKLV 181 FPY+F+Y EQ YM LK+TLD +GH ILEMPTGTGKTV+LL+LI++Y RP + KL+ Sbjct: 12 FPYKFLYKEQLEYMQALKQTLDEKGHGILEMPTGTGKTVSLLALIIAYLAQRPNTVKKLI 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 YCTRTV EM+K L E+R VL R D AVGL++R+NLC++P V Sbjct: 72 YCTRTVVEMEKTLEEVRLVLKARKAEGLND---------NFTAVGLSSRKNLCINPDV-- 120 Query: 362 ASSREEADALCRSMTASWAR 421 + ++ DA CR TA W + Sbjct: 121 INQKDRVDAECRKRTAEWVK 140 [133][TOP] >UniRef100_A0C5Z5 Chromosome undetermined scaffold_151, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0C5Z5_PARTE Length = 702 Score = 128 bits (321), Expect = 2e-28 Identities = 70/146 (47%), Positives = 92/146 (63%), Gaps = 1/146 (0%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPE-LAKLV 181 FPY+F+Y EQ YM LK+TLD +GH ILEMPTGTGKTV+LL+ IL+Y RP + KL+ Sbjct: 12 FPYKFLYKEQLEYMQALKQTLDEKGHGILEMPTGTGKTVSLLAFILAYLAQRPNTIKKLI 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 YCTRTV EM+K L E+R V+ R D AVGL++RRNLC++P V Sbjct: 72 YCTRTVVEMEKTLEEVRLVMKARKAEGLND---------NFTAVGLSSRRNLCINPDV-- 120 Query: 362 ASSREEADALCRSMTASWARGDPEDI 439 + ++ D+ CR TA W + +I Sbjct: 121 VNQKDRVDSECRKRTAEWVKRGQSEI 146 [134][TOP] >UniRef100_C6HCI5 DNA repair helicase RAD3 n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HCI5_AJECH Length = 773 Score = 127 bits (320), Expect = 3e-28 Identities = 68/137 (49%), Positives = 93/137 (67%), Gaps = 2/137 (1%) Frame = +2 Query: 44 MVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVYCTRTVGEMDKVLY 223 M DLK+TLDA GH +LEMP+GTGKTV+LLSLI++YQ ++PE KL+YC+RT+ E++K L Sbjct: 1 MCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHQPEQRKLIYCSRTMSEIEKALA 60 Query: 224 ELRRVLAHRDK--CFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSASSREEADALCR 397 EL+ ++ +R + FAED +GLT+R+NLCLHP+V S DA CR Sbjct: 61 ELKALMKYRAQQLGFAED----------FRGLGLTSRKNLCLHPSVKREKSGAVVDARCR 110 Query: 398 SMTASWARGDPEDIEDV 448 S+TA + + E EDV Sbjct: 111 SLTAGFVKEKKEKGEDV 127 [135][TOP] >UniRef100_Q6C0Y5 YALI0F20746p n=1 Tax=Yarrowia lipolytica RepID=Q6C0Y5_YARLI Length = 785 Score = 126 bits (317), Expect = 7e-28 Identities = 66/148 (44%), Positives = 94/148 (63%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 +PY +YPEQYAYM D+K+TLD G+ ILEMP+GTGKTV+LLSL ++YQ + PE K++Y Sbjct: 12 WPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQQHYPEHRKIIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL+ ++ R + + R +GLT+R+NLCL+P V Sbjct: 72 CSRTMSEIEKALAELKNLMKFRTETLGFEEDFR--------GLGLTSRKNLCLNPNVRYE 123 Query: 365 SSREEADALCRSMTASWARGDPEDIEDV 448 D CR+MT+ A+ EDV Sbjct: 124 KKGYIVDEKCRAMTSGIAKQKLAAGEDV 151 [136][TOP] >UniRef100_A1CP70 TFIIH complex helicase Rad3, putative n=1 Tax=Aspergillus clavatus RepID=A1CP70_ASPCL Length = 771 Score = 126 bits (317), Expect = 7e-28 Identities = 66/135 (48%), Positives = 91/135 (67%) Frame = +2 Query: 44 MVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVYCTRTVGEMDKVLY 223 M DLK+TLDA+G+ +LEMP+GTGKTVTLLSLI++YQ + PE KL+YC+RT+ E++K L Sbjct: 1 MCDLKKTLDAQGNCVLEMPSGTGKTVTLLSLIVAYQQHYPEHRKLIYCSRTMSEIEKALA 60 Query: 224 ELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSASSREEADALCRSM 403 EL+ ++ +R + R A+GLT+R+NLCLHP+V S DA CRS+ Sbjct: 61 ELKELMKYRTQQLGYTEDFR--------ALGLTSRKNLCLHPSVKREKSGAVVDARCRSL 112 Query: 404 TASWARGDPEDIEDV 448 TA + + E EDV Sbjct: 113 TAGFVKEKKERGEDV 127 [137][TOP] >UniRef100_UPI00016E32B1 UPI00016E32B1 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E32B1 Length = 739 Score = 126 bits (316), Expect = 9e-28 Identities = 70/166 (42%), Positives = 99/166 (59%), Gaps = 12/166 (7%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 YFPY+++YPEQY+YM++LKRTLDA+GH +LEMP+GTGKT++LLSLI++YQ Sbjct: 11 YFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ---------- 60 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 KV+ ELR++L + K + S LA+ L++R+NLC+HP VS+ Sbjct: 61 ----------KVVEELRKLLEYHAK--------QTGQSNNFLALALSSRKNLCIHPEVSA 102 Query: 362 ASSREEADALCRSMTASWAR----GDP--------EDIEDVGGRAP 463 +E D C S+TAS+ R DP ED + VG + P Sbjct: 103 LRFGKEVDGKCHSLTASYIRAQRHSDPNVPVCRYFEDFDAVGRQVP 148 [138][TOP] >UniRef100_C0S420 TFIIH basal transcription factor complex helicase subunit n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0S420_PARBP Length = 773 Score = 126 bits (316), Expect = 9e-28 Identities = 65/135 (48%), Positives = 90/135 (66%) Frame = +2 Query: 44 MVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVYCTRTVGEMDKVLY 223 M DLK+TLDA GH +LEMP+GTGKTV+LLSLI++YQ ++PE KL+YC+RT+ E++K L Sbjct: 1 MCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQQHKPEQRKLIYCSRTMSEIEKALA 60 Query: 224 ELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSASSREEADALCRSM 403 EL+ ++ +R + R +GLT+R+NLCLHP+V S DA CRS+ Sbjct: 61 ELKALMKYRAQQLGYTEDFR--------GLGLTSRKNLCLHPSVKREKSGTIVDARCRSL 112 Query: 404 TASWARGDPEDIEDV 448 TA + + E EDV Sbjct: 113 TAGFVKEKKERGEDV 127 [139][TOP] >UniRef100_B0XRP4 TFIIH complex helicase Rad3, putative n=2 Tax=Aspergillus fumigatus RepID=B0XRP4_ASPFC Length = 770 Score = 126 bits (316), Expect = 9e-28 Identities = 66/135 (48%), Positives = 89/135 (65%) Frame = +2 Query: 44 MVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVYCTRTVGEMDKVLY 223 M DLK+TLDA GH +LEMP+GTGKTV+LLSLI++YQ + PE KL+YC+RT+ E++K L Sbjct: 1 MCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQQHYPEHRKLIYCSRTMSEIEKALA 60 Query: 224 ELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSASSREEADALCRSM 403 EL+ ++ R + R A+GLT+R+NLCLHP+V S DA CRS+ Sbjct: 61 ELKELMKFRSQQLGYTEDFR--------ALGLTSRKNLCLHPSVKREKSGTVVDARCRSL 112 Query: 404 TASWARGDPEDIEDV 448 TA + + E EDV Sbjct: 113 TAGFVKEKKERGEDV 127 [140][TOP] >UniRef100_UPI00003BE676 hypothetical protein DEHA0G12815g n=1 Tax=Debaryomyces hansenii CBS767 RepID=UPI00003BE676 Length = 794 Score = 125 bits (313), Expect = 2e-27 Identities = 60/134 (44%), Positives = 88/134 (65%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM D+K+TLD G+ ILEMP+GTGKT++LLS+ ++YQ++ PE K+VY Sbjct: 12 FPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTISLLSITVAYQMHYPEHRKVVY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL ++ R + + + +GL++R+NLCLHP +S Sbjct: 72 CSRTMSEIEKALIELHNLMKFRAE--------QLGYVEEFRGLGLSSRKNLCLHPTISKE 123 Query: 365 SSREEADALCRSMT 406 D CR +T Sbjct: 124 RKGIVVDEKCRRVT 137 [141][TOP] >UniRef100_Q6BIB6 DEHA2G12056p n=1 Tax=Debaryomyces hansenii RepID=Q6BIB6_DEBHA Length = 794 Score = 125 bits (313), Expect = 2e-27 Identities = 60/134 (44%), Positives = 88/134 (65%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPEQYAYM D+K+TLD G+ ILEMP+GTGKT++LLS+ ++YQ++ PE K+VY Sbjct: 12 FPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTISLLSITVAYQMHYPEHRKVVY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L EL ++ R + + + +GL++R+NLCLHP +S Sbjct: 72 CSRTMSEIEKALIELHNLMKFRAE--------QLGYVEEFRGLGLSSRKNLCLHPTISKE 123 Query: 365 SSREEADALCRSMT 406 D CR +T Sbjct: 124 RKGIVVDEKCRRVT 137 [142][TOP] >UniRef100_A4HDT9 TFIIH basal transcription factor complex helicase subunit, putative (Rad3/xpd protein, putative) (Dna excision repair protein, putative) n=1 Tax=Leishmania braziliensis RepID=A4HDT9_LEIBR Length = 813 Score = 124 bits (312), Expect = 3e-27 Identities = 63/138 (45%), Positives = 91/138 (65%), Gaps = 1/138 (0%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSY-QLYRPELAKLV 181 FPYE++YPEQ Y+ +LKR LD GH +LEMP+GTGKT++LLS++++Y + E K+V Sbjct: 12 FPYEYIYPEQLDYITELKRGLDKGGHMVLEMPSGTGKTISLLSILVAYLHHHAHEKRKVV 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 YCTRTV EM K + E+R++L H + A R + LT ++NLC+ P+V+S Sbjct: 72 YCTRTVEEMVKTMGEMRKLLKHWE--------AEGEQLRPLRGLCLTAKKNLCIEPSVTS 123 Query: 362 ASSREEADALCRSMTASW 415 ++ DA CRS+TA W Sbjct: 124 LIHPDKVDAGCRSITAPW 141 [143][TOP] >UniRef100_Q4YW37 Putative uncharacterized protein (Fragment) n=1 Tax=Plasmodium berghei RepID=Q4YW37_PLABE Length = 363 Score = 124 bits (311), Expect = 3e-27 Identities = 67/178 (37%), Positives = 99/178 (55%), Gaps = 38/178 (21%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 +FPY+++YPEQYAYM LK+TLD+ GH +LEMPTGTGKTV + SLI SYQ Y+ + +K + Sbjct: 12 FFPYDYIYPEQYAYMKYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSYQYYKNDNSKFI 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHR----DKC------------------------------ 259 +CTRTV EM+K L EL++V+ +R KC Sbjct: 72 FCTRTVAEMEKSLIELKKVINYRINIIKKCNELSKKISKSNIKEDNDVIKNENNDEKETN 131 Query: 260 ----FAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSASSREEADALCRSMTASWAR 421 ++ + + LA+G++ RR +C++ V RE+ D CR +TA++ R Sbjct: 132 IINEEVDNISNGFGNNSEILAIGISARRCMCVNEKVLLKHEREKIDEECRKLTATFIR 189 [144][TOP] >UniRef100_Q4XY88 DNA excision-repair helicase, putative n=1 Tax=Plasmodium chabaudi RepID=Q4XY88_PLACH Length = 970 Score = 123 bits (309), Expect = 6e-27 Identities = 67/170 (39%), Positives = 98/170 (57%), Gaps = 30/170 (17%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 +FPY+++YPEQYAYM LK TLD+ GH +LEMPTGTGKTV + SLI SYQ Y+ + +K + Sbjct: 12 FFPYDYIYPEQYAYMKYLK-TLDSEGHCVLEMPTGTGKTVAIFSLITSYQYYKNDDSKFI 70 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFA------------------------------ED 271 +CTRTV EM+K L EL++V+ +R ++ Sbjct: 71 FCTRTVAEMEKSLIELKKVINYRINIIKKRNEISEQIVKTDIKEDSDMIRNEYKNEEDDN 130 Query: 272 APARAAASRKTLAVGLTTRRNLCLHPAVSSASSREEADALCRSMTASWAR 421 A R + + LA+G++ RR +C++ V RE+ D CR +TA++ R Sbjct: 131 AWNRFGRNSEILAMGISARRCMCVNEKVLLKHEREKIDEECRKLTATFVR 180 [145][TOP] >UniRef100_Q4CZ36 TFIIH basal transcription factor complex helicase subunit, putative n=1 Tax=Trypanosoma cruzi RepID=Q4CZ36_TRYCR Length = 804 Score = 123 bits (309), Expect = 6e-27 Identities = 65/138 (47%), Positives = 90/138 (65%), Gaps = 1/138 (0%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYR-PELAKLV 181 FPYE++YPEQ YM +LK+ LD GH +LEMP+GTGKT TLLSL+++Y Y E K++ Sbjct: 12 FPYEYIYPEQLEYMTELKKGLDQGGHIVLEMPSGTGKTTTLLSLLIAYIHYHADEKRKVI 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 YCTRTV EM K + ELR++L + + D ++R + LT ++NLC+ V+S Sbjct: 72 YCTRTVEEMTKTMGELRKLL----ELWNTD---ELGSNRPLRGLCLTAKKNLCIESTVAS 124 Query: 362 ASSREEADALCRSMTASW 415 E+ DA CRS+TA W Sbjct: 125 QRYPEDVDAGCRSLTAPW 142 [146][TOP] >UniRef100_Q7RXF5 DNA repair helicase RAD3 n=1 Tax=Neurospora crassa RepID=Q7RXF5_NEUCR Length = 796 Score = 123 bits (309), Expect = 6e-27 Identities = 68/148 (45%), Positives = 91/148 (61%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +YPE TLDA G+ +LEMP+GTGKTVTLLSLI++YQ Y PE KL+Y Sbjct: 12 FPYPRIYPE----------TLDAGGNCVLEMPSGTGKTVTLLSLIVAYQQYYPEHRKLIY 61 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C+RT+ E++K L ELR ++ R + + R +GLT+R+NLCLHP+V Sbjct: 62 CSRTMSEIEKALVELRALMKFRAERLGHEEEFR--------GLGLTSRKNLCLHPSVKRE 113 Query: 365 SSREEADALCRSMTASWARGDPEDIEDV 448 S DA CRS+TA + + E E+V Sbjct: 114 KSGAIVDARCRSLTAGFVKEKREKGENV 141 [147][TOP] >UniRef100_A4I136 TFIIH basal transcription factor complex helicase subunit, putative (Rad3/xpd protein, putative) (Dna excision repair protein, putative) n=1 Tax=Leishmania infantum RepID=A4I136_LEIIN Length = 813 Score = 123 bits (308), Expect = 7e-27 Identities = 63/138 (45%), Positives = 90/138 (65%), Gaps = 1/138 (0%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSY-QLYRPELAKLV 181 FPYE++YPEQ Y+ +LKR LD GH +LEMP+GTGKT++LLS++++Y + E K+V Sbjct: 12 FPYEYIYPEQLDYITELKRGLDKGGHMVLEMPSGTGKTISLLSILVAYLHHHAHEKRKVV 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 YCTRTV EM K + E+R++L H + A R + LT ++NLC+ +V+S Sbjct: 72 YCTRTVEEMVKTMGEMRKLLKHWE--------AEGEQLRPLRGLCLTAKKNLCIETSVAS 123 Query: 362 ASSREEADALCRSMTASW 415 +E DA CRS+TA W Sbjct: 124 LIHPDEVDAGCRSITAPW 141 [148][TOP] >UniRef100_A7AVA1 DNA excision repair helicase n=1 Tax=Babesia bovis RepID=A7AVA1_BABBO Length = 822 Score = 122 bits (307), Expect = 1e-26 Identities = 58/98 (59%), Positives = 74/98 (75%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 +FPY +YPEQ AY+ LK TLDA+GH++LEMPTGTGKTV L SLI SYQL RPE+ +L+ Sbjct: 12 FFPYPQIYPEQLAYLRSLKSTLDAQGHAVLEMPTGTGKTVALFSLITSYQLARPEMGRLI 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAAS 295 YCTRT+ EM+K L EL+ V+ +RD +D A A+S Sbjct: 72 YCTRTIPEMEKSLLELKEVIKYRDAELEKDRVAMEASS 109 [149][TOP] >UniRef100_B2VS13 TFIIH basal transcription factor complex helicase subunit n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2VS13_PYRTR Length = 772 Score = 122 bits (305), Expect = 2e-26 Identities = 64/137 (46%), Positives = 89/137 (64%), Gaps = 5/137 (3%) Frame = +2 Query: 44 MVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVYCTRTVGEMDKVLY 223 M DLKRTLD GH +LEMP+GTGKTV+LLSLI++YQ + PE KL+YC+RT+ E++K L Sbjct: 1 MCDLKRTLDQGGHCVLEMPSGTGKTVSLLSLIVAYQQHYPEKRKLIYCSRTMSEIEKALA 60 Query: 224 ELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSASSREEADALCRSM 403 EL+ ++ +R + R +GLT+R+NLCLHP+V S DA CRS+ Sbjct: 61 ELKALMKYRTTELGYEEDFR--------GLGLTSRKNLCLHPSVKREKSGTVVDARCRSL 112 Query: 404 TASWA-----RGDPEDI 439 TA + RG+P ++ Sbjct: 113 TAGFVKEKKERGEPVEL 129 [150][TOP] >UniRef100_Q4QAA2 TFIIH basal transcription factor complex helicase subunit, putative (Rad3/xpd protein, putative) (Dna excision repair protein, putative) n=1 Tax=Leishmania major RepID=Q4QAA2_LEIMA Length = 813 Score = 121 bits (304), Expect = 2e-26 Identities = 62/138 (44%), Positives = 90/138 (65%), Gaps = 1/138 (0%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSY-QLYRPELAKLV 181 FPYE++YPEQ Y+ +LKR LD GH +LEMP+GTGKT++LLS++++Y + E K+V Sbjct: 12 FPYEYIYPEQLDYITELKRGLDKGGHMVLEMPSGTGKTISLLSILVAYLHHHAHEKRKVV 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 YCTRTV EM K + E+R++L H + A R + L+ ++NLC+ +V+S Sbjct: 72 YCTRTVEEMVKTMGEMRKLLKHWE--------AEGEQLRPLRGLCLSAKKNLCIETSVAS 123 Query: 362 ASSREEADALCRSMTASW 415 +E DA CRS+TA W Sbjct: 124 RIHPDEVDAGCRSITAPW 141 [151][TOP] >UniRef100_A7EW97 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7EW97_SCLS1 Length = 616 Score = 120 bits (302), Expect = 4e-26 Identities = 62/130 (47%), Positives = 85/130 (65%) Frame = +2 Query: 59 RTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVYCTRTVGEMDKVLYELRRV 238 RTLDA GH +LEMP+GTGKT++LLSLI++YQ Y PE KL+YC+RT+ E++K L EL+ + Sbjct: 2 RTLDAGGHCVLEMPSGTGKTISLLSLIVAYQQYYPEHRKLIYCSRTMSEIEKALAELKAL 61 Query: 239 LAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSASSREEADALCRSMTASWA 418 + +R + R +GLT+R+NLCLHP+V S DA CRS+TA + Sbjct: 62 MKYRAEQLGHQEDFR--------GLGLTSRKNLCLHPSVKREKSGAVVDARCRSLTAGFV 113 Query: 419 RGDPEDIEDV 448 + E EDV Sbjct: 114 KEKKERGEDV 123 [152][TOP] >UniRef100_A6SJ71 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6SJ71_BOTFB Length = 764 Score = 120 bits (302), Expect = 4e-26 Identities = 62/130 (47%), Positives = 85/130 (65%) Frame = +2 Query: 59 RTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVYCTRTVGEMDKVLYELRRV 238 RTLDA GH +LEMP+GTGKT++LLSLI++YQ Y PE KL+YC+RT+ E++K L EL+ + Sbjct: 2 RTLDAGGHCVLEMPSGTGKTISLLSLIVAYQQYYPEHRKLIYCSRTMSEIEKALAELKAL 61 Query: 239 LAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSASSREEADALCRSMTASWA 418 + +R + R +GLT+R+NLCLHP+V S DA CRS+TA + Sbjct: 62 MKYRAEQLGHQEDFR--------GLGLTSRKNLCLHPSVKREKSGAVVDARCRSLTAGFV 113 Query: 419 RGDPEDIEDV 448 + E EDV Sbjct: 114 KEKKERGEDV 123 [153][TOP] >UniRef100_A5KEA4 DNA excision-repair helicase, putative n=1 Tax=Plasmodium vivax RepID=A5KEA4_PLAVI Length = 1041 Score = 119 bits (299), Expect = 8e-26 Identities = 70/196 (35%), Positives = 99/196 (50%), Gaps = 56/196 (28%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 +FPY+++YPEQYAYM LK+TLD+ GH +LEMPTGTGKTV + SLI SYQ + + K + Sbjct: 12 FFPYDYIYPEQYAYMRYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSYQHGKNDEGKFI 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHR------------------------------------- 250 +CTRTV EM+K L EL++V+ +R Sbjct: 72 FCTRTVAEMEKSLIELKKVIQYRVDTLRRRVVSGEVKGERADERAEDEMKDQTGEQTTAN 131 Query: 251 ------------DKCFAEDAPARAAASRKT-------LAVGLTTRRNLCLHPAVSSASSR 373 D A A AA R++ LA+G++ RR +C++ V R Sbjct: 132 DANDANDANQANDATTANHANDATAAQRRSGDLQGDILAIGISARRCMCVNERVLRKHER 191 Query: 374 EEADALCRSMTASWAR 421 E+ D CR +TA++ R Sbjct: 192 EKIDEECRKLTATFVR 207 [154][TOP] >UniRef100_UPI000023E198 hypothetical protein FG04295.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023E198 Length = 761 Score = 118 bits (295), Expect = 2e-25 Identities = 61/130 (46%), Positives = 86/130 (66%) Frame = +2 Query: 59 RTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVYCTRTVGEMDKVLYELRRV 238 +TLDA GH +LEMP+GTGKTV+LLSLI++YQ Y PE KL+YC+RT+ E++K L EL+ + Sbjct: 2 QTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQYMPEKRKLIYCSRTMSEIEKALVELKSL 61 Query: 239 LAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSASSREEADALCRSMTASWA 418 + +R + + R +GLT+R+NLCLHP+V S DA CRS+TA + Sbjct: 62 MKYRAEELGYEEEFR--------GLGLTSRKNLCLHPSVKREKSGAIVDARCRSLTAGFV 113 Query: 419 RGDPEDIEDV 448 + E E+V Sbjct: 114 KEKKERGENV 123 [155][TOP] >UniRef100_Q7YZG6 Putative uncharacterized protein n=1 Tax=Caenorhabditis elegans RepID=Q7YZG6_CAEEL Length = 197 Score = 118 bits (295), Expect = 2e-25 Identities = 59/140 (42%), Positives = 92/140 (65%), Gaps = 1/140 (0%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQL-YRPELAKLV 181 FPY++VYPEQ YM ++K+ LDARGH +LEMP+GTGKTV+LLSL+L+Y + Y +L KLV Sbjct: 12 FPYDYVYPEQVLYMKEVKKALDARGHGLLEMPSGTGKTVSLLSLVLAYMISYPDKLDKLV 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 YC+RT+ E++K + E++ + + +K + V ++ R+NLC++ V++ Sbjct: 72 YCSRTIPEIEKCVEEMKVLYDYWEK--------ETGQPVAKITVAMSARKNLCVNEPVAA 123 Query: 362 ASSREEADALCRSMTASWAR 421 D+ C+ +TAS AR Sbjct: 124 LRFGNTVDSACQKLTASSAR 143 [156][TOP] >UniRef100_A8XML3 Putative uncharacterized protein n=1 Tax=Caenorhabditis briggsae RepID=A8XML3_CAEBR Length = 755 Score = 118 bits (295), Expect = 2e-25 Identities = 58/151 (38%), Positives = 95/151 (62%), Gaps = 1/151 (0%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPE-LAKLV 181 FPY++VYPEQ YM ++K+ LDA GH +LEMP+GTGKTV+LLSL+LSY + P+ L KLV Sbjct: 12 FPYDYVYPEQVLYMKEVKKALDANGHGLLEMPSGTGKTVSLLSLVLSYMISYPDRLDKLV 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 YC+RT+ E++K + E++ + + +K + V ++ R+NLC++ V++ Sbjct: 72 YCSRTIPEIEKCVEEMKVLYDYWEK--------ETGVPVAKITVAMSARKNLCINEKVAA 123 Query: 362 ASSREEADALCRSMTASWARGDPEDIEDVGG 454 D+ C+ +T+S R ++ ++ G Sbjct: 124 LRFGNTVDSACQKLTSSSVRAKRQENSEIEG 154 [157][TOP] >UniRef100_Q7KZU6 Excision repair cross-complementing rodent repair deficiency, complementation group 2 (Xeroderma pigmentosum D) n=1 Tax=Homo sapiens RepID=Q7KZU6_HUMAN Length = 405 Score = 117 bits (294), Expect = 3e-25 Identities = 61/127 (48%), Positives = 88/127 (69%), Gaps = 1/127 (0%) Frame = +2 Query: 44 MVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ-LYRPELAKLVYCTRTVGEMDKVL 220 M +LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Y E+ KL+YC+RTV E++KV+ Sbjct: 1 MRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVI 60 Query: 221 YELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSASSREEADALCRS 400 ELR++L +K E P L + L++R+NLC+HP V+ ++ D C S Sbjct: 61 EELRKLLNFYEKQEGEKLP--------FLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHS 112 Query: 401 MTASWAR 421 +TAS+ R Sbjct: 113 LTASYVR 119 [158][TOP] >UniRef100_C7YZ83 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7YZ83_NECH7 Length = 761 Score = 117 bits (294), Expect = 3e-25 Identities = 60/130 (46%), Positives = 86/130 (66%) Frame = +2 Query: 59 RTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVYCTRTVGEMDKVLYELRRV 238 +TLDA GH +LEMP+GTGKTV+LLSLI++YQ Y PE KL+YC+RT+ E++K L EL+ + Sbjct: 2 QTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQYMPEKRKLIYCSRTMSEIEKALVELKSL 61 Query: 239 LAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSASSREEADALCRSMTASWA 418 + +R + + R +GLT+R+NLCLHP+V S DA CRS+TA + Sbjct: 62 MKYRAEELGYEEEFR--------GLGLTSRKNLCLHPSVKREKSGSVVDARCRSLTAGFV 113 Query: 419 RGDPEDIEDV 448 + + E+V Sbjct: 114 KEKKDRGENV 123 [159][TOP] >UniRef100_UPI000186EF8D TFIIH basal transcription factor complex helicase subunit, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186EF8D Length = 747 Score = 117 bits (292), Expect = 5e-25 Identities = 62/141 (43%), Positives = 89/141 (63%), Gaps = 1/141 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRP-ELAKL 178 YFPY+++YPEQYAYM++LK+ LDA+GH +LEMP+GTGKT TLLSL++SY L P ++ KL Sbjct: 11 YFPYDYIYPEQYAYMIELKKGLDAKGHCLLEMPSGTGKTTTLLSLVVSYMLTYPLDVTKL 70 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +YC+RTV E++KV+ ELR + + ++ + T +GL VS Sbjct: 71 IYCSRTVPEIEKVVEELRLLFKYIEQ----------ETGKATKMLGL-----------VS 109 Query: 359 SASSREEADALCRSMTASWAR 421 + D C S+TAS+ R Sbjct: 110 KEREGKVVDGRCHSLTASYIR 130 [160][TOP] >UniRef100_Q4N9F9 DNA repair protein rad3, putative n=1 Tax=Theileria parva RepID=Q4N9F9_THEPA Length = 894 Score = 116 bits (291), Expect = 7e-25 Identities = 53/84 (63%), Positives = 66/84 (78%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 +FPY +YPEQ AYM LK LD++GH++LEMPTGTGKTV L S + SYQL RPEL KLV Sbjct: 12 FFPYPKIYPEQIAYMKSLKTALDSKGHAVLEMPTGTGKTVALFSFVSSYQLARPELGKLV 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHRD 253 YCTRT+ EM+K L EL V+++R+ Sbjct: 72 YCTRTIHEMEKALLELSEVISYRN 95 Score = 54.3 bits (129), Expect = 4e-06 Identities = 25/47 (53%), Positives = 32/47 (68%) Frame = +2 Query: 305 LAVGLTTRRNLCLHPAVSSASSREEADALCRSMTASWARGDPEDIED 445 LAVGL +RRNLC+HP VSS + R + D C +T+ W R ED+ED Sbjct: 167 LAVGLCSRRNLCIHPEVSSHADRTKIDEKCCDLTSVWRRMQFEDLED 213 [161][TOP] >UniRef100_A7RNX6 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RNX6_NEMVE Length = 735 Score = 116 bits (290), Expect = 9e-25 Identities = 59/127 (46%), Positives = 88/127 (69%), Gaps = 1/127 (0%) Frame = +2 Query: 44 MVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRP-ELAKLVYCTRTVGEMDKVL 220 M++LKRTLDA+GH +LEMP+GTGKTV+LLSLI++Y +P EL KL+YC+RTV E++KV+ Sbjct: 1 MLELKRTLDAKGHCLLEMPSGTGKTVSLLSLIVAYLKNKPLELTKLIYCSRTVPEIEKVM 60 Query: 221 YELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSASSREEADALCRS 400 EL+++ + + + LA+ L++R+NLC+HP V+ ++ D C S Sbjct: 61 EELKKLTEYYE--------SETGEKPNILALALSSRKNLCIHPEVAGEREGKKVDGKCLS 112 Query: 401 MTASWAR 421 MTAS+ R Sbjct: 113 MTASFVR 119 [162][TOP] >UniRef100_Q7RRI1 RAD3-like DNA helicase-related n=1 Tax=Plasmodium yoelii yoelii RepID=Q7RRI1_PLAYO Length = 1032 Score = 115 bits (289), Expect = 1e-24 Identities = 50/83 (60%), Positives = 68/83 (81%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 +FPY+++YPEQYAYM LK+TLD+ GH +LEMPTGTGKTV + SLI SYQ Y+ + +K + Sbjct: 12 FFPYDYIYPEQYAYMKYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSYQYYKNDNSKFI 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHR 250 +CTRTV EM+K L EL++V+ +R Sbjct: 72 FCTRTVAEMEKSLIELKKVINYR 94 [163][TOP] >UniRef100_UPI00015AA496 excision repair cross-complementing rodent repair deficiency, complementation group 2 n=1 Tax=Mus musculus RepID=UPI00015AA496 Length = 739 Score = 115 bits (288), Expect = 2e-24 Identities = 58/140 (41%), Positives = 89/140 (63%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 YFPY+++YPEQ++YM++LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Sbjct: 11 YFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQ---------- 60 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 +V+ ELR++L+ ++ E P L + L++R+NLC+HP V+ Sbjct: 61 ----------RVIEELRKLLSFYEQQEGEKLP--------FLGLALSSRKNLCIHPEVTP 102 Query: 362 ASSREEADALCRSMTASWAR 421 ++ D C S+TAS+ R Sbjct: 103 LRFGKDVDGKCHSLTASYVR 122 [164][TOP] >UniRef100_Q8K223 Ercc2 protein n=1 Tax=Mus musculus RepID=Q8K223_MOUSE Length = 739 Score = 115 bits (288), Expect = 2e-24 Identities = 58/140 (41%), Positives = 89/140 (63%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 YFPY+++YPEQ++YM++LKRTLDA+GH +LEMP+GTGKTV+LL+LI++YQ Sbjct: 11 YFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQ---------- 60 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 +V+ ELR++L+ ++ E P L + L++R+NLC+HP V+ Sbjct: 61 ----------RVIEELRKLLSFYEQQEGEKLP--------FLGLALSSRKNLCIHPEVTP 102 Query: 362 ASSREEADALCRSMTASWAR 421 ++ D C S+TAS+ R Sbjct: 103 LRFGKDVDGKCHSLTASYVR 122 [165][TOP] >UniRef100_Q8WSK4 RAD3-like DNA helicase n=1 Tax=Plasmodium falciparum RepID=Q8WSK4_PLAFA Length = 1056 Score = 114 bits (285), Expect = 3e-24 Identities = 49/83 (59%), Positives = 67/83 (80%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 +FPY+++YPEQYAYM LK+TLD+ GH +LEMPTGTGKTV + SLI SYQ ++ + K + Sbjct: 12 FFPYDYIYPEQYAYMKYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSYQYHKKDEGKFI 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHR 250 +CTRTV EM+K L EL++V+ +R Sbjct: 72 FCTRTVAEMEKSLIELKKVIQYR 94 [166][TOP] >UniRef100_Q8I2H7 DNA excision-repair helicase, putative n=1 Tax=Plasmodium falciparum 3D7 RepID=Q8I2H7_PLAF7 Length = 1056 Score = 114 bits (285), Expect = 3e-24 Identities = 49/83 (59%), Positives = 67/83 (80%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 +FPY+++YPEQYAYM LK+TLD+ GH +LEMPTGTGKTV + SLI SYQ ++ + K + Sbjct: 12 FFPYDYIYPEQYAYMKYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSYQYHKKDEGKFI 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHR 250 +CTRTV EM+K L EL++V+ +R Sbjct: 72 FCTRTVAEMEKSLIELKKVIQYR 94 [167][TOP] >UniRef100_B3L315 Dna excision-repair helicase, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3L315_PLAKH Length = 1017 Score = 111 bits (278), Expect = 2e-23 Identities = 49/83 (59%), Positives = 66/83 (79%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 +FPY+++YPEQYAYM LK+TLD+ GH +LEMPTGTGKTV + SLI SYQ + + K + Sbjct: 12 FFPYDYIYPEQYAYMRYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSYQYKKNDDGKFI 71 Query: 182 YCTRTVGEMDKVLYELRRVLAHR 250 +CTRTV EM+K L EL++V+ +R Sbjct: 72 FCTRTVAEMEKSLIELKKVIQYR 94 [168][TOP] >UniRef100_B4KNC2 GI20811 n=1 Tax=Drosophila mojavensis RepID=B4KNC2_DROMO Length = 745 Score = 111 bits (277), Expect = 3e-23 Identities = 59/135 (43%), Positives = 90/135 (66%), Gaps = 5/135 (3%) Frame = +2 Query: 44 MVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPE-LAKLVYCTRTVGEMDKVL 220 M++LKR+LDA+GH +LEMP+GTGKT TLLSL+++Y + PE + KL+YC+RTV E++KV+ Sbjct: 1 MLELKRSLDAKGHCLLEMPSGTGKTATLLSLVVAYMIEHPETVRKLIYCSRTVPEIEKVI 60 Query: 221 YELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSASSREEADALCRS 400 EL+ ++A+ + +AP + + L++R+NLC+HP VS + D C Sbjct: 61 AELQNLMAY----YERNAPVAPGFT----GLVLSSRKNLCIHPEVSKEREGKAVDGKCYG 112 Query: 401 MTASWARG----DPE 433 +TAS+ R DPE Sbjct: 113 LTASYIRERHELDPE 127 [169][TOP] >UniRef100_Q8SRT4 DNA REPAIR HELICASE OF THE RAD3/XPD SUBFAMILY n=1 Tax=Encephalitozoon cuniculi RepID=Q8SRT4_ENCCU Length = 742 Score = 107 bits (266), Expect = 6e-22 Identities = 63/152 (41%), Positives = 88/152 (57%), Gaps = 3/152 (1%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPEL---A 172 YFPY VYPEQ YM ++KR+LD +GH ++EMP+GTGKTV LLS+ +SYQL+ Sbjct: 11 YFPYSSVYPEQLKYMREVKRSLDNKGHCLIEMPSGTGKTVALLSMTISYQLHMKSKNVHF 70 Query: 173 KLVYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPA 352 K+VYC+RTV E++K L EL RV+ + K + L +GLT R+NLC++ A Sbjct: 71 KVVYCSRTVPEVEKALKELDRVVEYIKK----------HRPIEFLGLGLTGRKNLCINKA 120 Query: 353 VSSASSREEADALCRSMTASWARGDPEDIEDV 448 A D CR + A + E++ Sbjct: 121 ---ALKSFNVDVACRRLVNKLAESKCDFYENL 149 [170][TOP] >UniRef100_UPI00006CBDC2 DNA repair helicase n=1 Tax=Tetrahymena thermophila RepID=UPI00006CBDC2 Length = 807 Score = 105 bits (261), Expect = 2e-21 Identities = 55/117 (47%), Positives = 76/117 (64%), Gaps = 1/117 (0%) Frame = +2 Query: 74 RGHSILEMPTGTGKTVTLLSLILSY-QLYRPELAKLVYCTRTVGEMDKVLYELRRVLAHR 250 +GH I+EMPTGTGKTV+LL+LI SY + + + KL+YCTRTV EM+K + E++ +L +R Sbjct: 2 KGHGIIEMPTGTGKTVSLLALITSYLESNQDKFKKLIYCTRTVVEMEKTIEEVKFILDNR 61 Query: 251 DKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSASSREEADALCRSMTASWAR 421 + E+ K L GL+ R NLC+HP VS SR+ DA C+ +TA W R Sbjct: 62 KQEKPEE-------QFKFLCTGLSARSNLCIHPNVSRQQSRDRVDAECKKLTAPWVR 111 [171][TOP] >UniRef100_C4QMI5 DNA repair helicase rad3/xp-d, putative n=1 Tax=Schistosoma mansoni RepID=C4QMI5_SCHMA Length = 764 Score = 104 bits (259), Expect = 4e-21 Identities = 55/127 (43%), Positives = 83/127 (65%), Gaps = 1/127 (0%) Frame = +2 Query: 44 MVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELA-KLVYCTRTVGEMDKVL 220 M++LKRT+DA+GH +LEMP+GTGKTV+LLSLI++Y RP + K +YC+RTV E++KV+ Sbjct: 1 MIELKRTIDAKGHGVLEMPSGTGKTVSLLSLIVAYMKARPGIVEKFIYCSRTVPELEKVI 60 Query: 221 YELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSASSREEADALCRS 400 EL+ + DK +A + + L + L++R+NLC+ V A D+ C Sbjct: 61 EELKVL----DKYYATETNEKGCG---LLGIVLSSRKNLCIQRDVKQAGDGAAVDSACFR 113 Query: 401 MTASWAR 421 +TAS+ R Sbjct: 114 LTASFVR 120 [172][TOP] >UniRef100_C9SE89 DNA repair helicase RAD3 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SE89_9PEZI Length = 756 Score = 102 bits (254), Expect = 1e-20 Identities = 52/118 (44%), Positives = 77/118 (65%) Frame = +2 Query: 95 MPTGTGKTVTLLSLILSYQLYRPELAKLVYCTRTVGEMDKVLYELRRVLAHRDKCFAEDA 274 MP+GTGKTV+LLSLI++YQ + PE KL+YC+RT+ E++K L ELR ++ +R + ++ Sbjct: 1 MPSGTGKTVSLLSLIVAYQQHYPEHRKLIYCSRTMSEIEKALAELRELMKYRTEQLGQEE 60 Query: 275 PARAAASRKTLAVGLTTRRNLCLHPAVSSASSREEADALCRSMTASWARGDPEDIEDV 448 R +GLT+R+NLCLHP+V S DA CRS+TA + + + E+V Sbjct: 61 EFR--------GLGLTSRKNLCLHPSVKREKSGSVVDARCRSLTAGFVKEKKDKGENV 110 [173][TOP] >UniRef100_C4V9P9 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4V9P9_NOSCE Length = 476 Score = 100 bits (250), Expect = 4e-20 Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 4/138 (2%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPEL---- 169 YFPY +YPEQ Y+ +LK +D GH ++EMP+GTGKTV LLS+ +SY ++ Sbjct: 11 YFPYSQIYPEQLQYIKELKSNIDTNGHILIEMPSGTGKTVALLSITVSYIIHMKRFFNKK 70 Query: 170 AKLVYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHP 349 KLVYC+RTV E+DK LYEL ++ + + D L VGLT ++ LC++ Sbjct: 71 VKLVYCSRTVSEIDKALYELENLINYIKQYINFD----------FLGVGLTAKKILCVN- 119 Query: 350 AVSSASSREEADALCRSM 403 A S D C+ + Sbjct: 120 --DEALSSRNIDITCKKL 135 [174][TOP] >UniRef100_A2G2G9 Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis G3 RepID=A2G2G9_TRIVA Length = 84 Score = 79.3 bits (194), Expect = 1e-13 Identities = 37/69 (53%), Positives = 47/69 (68%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FP+ YPEQ YM LK +LDA G +LEMP+GTGKTV +SLIL+Y R L+Y Sbjct: 13 FPFPQAYPEQIEYMTQLKLSLDAGGPCVLEMPSGTGKTVLFVSLILAYMSQRKNACPLIY 72 Query: 185 CTRTVGEMD 211 CTRT+ +M+ Sbjct: 73 CTRTIPKMN 81 [175][TOP] >UniRef100_A8MX75 Putative uncharacterized protein ERCC2 n=1 Tax=Homo sapiens RepID=A8MX75_HUMAN Length = 710 Score = 69.7 bits (169), Expect = 1e-10 Identities = 42/126 (33%), Positives = 65/126 (51%) Frame = +2 Query: 44 MVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVYCTRTVGEMDKVLY 223 M +LKRTLDA+ + + E+ KL+YC+RTV E++KV+ Sbjct: 1 MRELKRTLDAKAYPL-------------------------EVTKLIYCSRTVPEIEKVIE 35 Query: 224 ELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSASSREEADALCRSM 403 ELR++L +K E P L + L++R+NLC+HP V+ ++ D C S+ Sbjct: 36 ELRKLLNFYEKQEGEKLP--------FLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSL 87 Query: 404 TASWAR 421 TAS+ R Sbjct: 88 TASYVR 93 [176][TOP] >UniRef100_A2F1W2 Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis G3 RepID=A2F1W2_TRIVA Length = 752 Score = 68.2 bits (165), Expect = 3e-10 Identities = 41/139 (29%), Positives = 68/139 (48%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPY +Y EQ + M +K +LDARG + E P G GK + + S+ L Y P++ +VY Sbjct: 20 FPYRMIYSEQKSLMEQIKLSLDARGPFVFETPPGIGKLIAVFSIYLEYLSKHPDIGPIVY 79 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 T T + + V+ R+ A+ P ++ A+ L ++ C++ V + Sbjct: 80 STDTYQSYLRAFEAFQIVVKARE---ADPDP----FNKSITAISLGSKHFQCINKTVKES 132 Query: 365 SSREEADALCRSMTASWAR 421 E+ LC + T SW+R Sbjct: 133 DDIED---LCFNNTCSWSR 148 [177][TOP] >UniRef100_A2E1B9 Helicase, putative n=1 Tax=Trichomonas vaginalis G3 RepID=A2E1B9_TRIVA Length = 747 Score = 63.2 bits (152), Expect = 9e-09 Identities = 31/78 (39%), Positives = 51/78 (65%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 +FPY+ YP Q YM + + D ++ILE PTGTGKT++LL +LS++ R ++++ Sbjct: 11 HFPYK-PYPLQETYMSKVIESCDTGNYAILESPTGTGKTLSLLCSVLSWRQQRNTSSRII 69 Query: 182 YCTRTVGEMDKVLYELRR 235 Y +RT ++ V+ EL+R Sbjct: 70 YSSRTHSQLSNVIKELKR 87 [178][TOP] >UniRef100_Q676B6 Helicase-like protein NHL-like protein n=1 Tax=Oikopleura dioica RepID=Q676B6_OIKDI Length = 1016 Score = 62.8 bits (151), Expect = 1e-08 Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 25/154 (16%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ----------- 151 FPY+ YP Q Y+ L R H++LE PTGTGKT+ LL+ +++Y+ Sbjct: 16 FPYD-PYPAQEEYIKKCVEALVKRNHAVLESPTGTGKTLCLLASVIAYREWAKRNPPKNK 74 Query: 152 ----LYRPELAKLVYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGL 319 L + K++Y +RT ++ +V+ ELR++ RD C + R +L V L Sbjct: 75 YGGSLGTESIPKIIYASRTHSQLTQVVSELRKL---RDVC-GYNVDMTVVGGRSSLCVDL 130 Query: 320 TTRR--------NLC--LHPAVSSASSREEADAL 391 T ++ N C L + + ++EAD L Sbjct: 131 TVKKITNNSEQQNACRALRNGKTGCAHKKEADKL 164 [179][TOP] >UniRef100_A2DDD4 Helicase, putative n=1 Tax=Trichomonas vaginalis G3 RepID=A2DDD4_TRIVA Length = 1428 Score = 59.3 bits (142), Expect = 1e-07 Identities = 29/78 (37%), Positives = 48/78 (61%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FPYE Y Q M + + + ++++E PTGTGKT+ LLS L+YQ P+L ++Y Sbjct: 14 FPYEKPYKSQEVVMEKTIKGIASNHNALIESPTGTGKTLALLSASLAYQHVDPKLDSIIY 73 Query: 185 CTRTVGEMDKVLYELRRV 238 +RT ++ +V+ E +R+ Sbjct: 74 TSRTHTQLKQVISEYKRL 91 [180][TOP] >UniRef100_O58428 Putative uncharacterized protein PH0697 n=1 Tax=Pyrococcus horikoshii RepID=O58428_PYRHO Length = 641 Score = 58.9 bits (141), Expect = 2e-07 Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 1/135 (0%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 YFPYE P Q ++ +K + + I+E PTG GKT+++L+ +L Y + K+V Sbjct: 6 YFPYEKFRPNQREFIEIVKEAVKRGENLIVEAPTGFGKTISVLAGVLPYAISLG--YKVV 63 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 Y RT +MD+V+ ELR++ + + +R++LCLH + + Sbjct: 64 YLARTHKQMDRVIEELRKI----------------GEKSEVSGIEFRSRKDLCLHAYIQT 107 Query: 362 -ASSREEADALCRSM 403 A + +C+S+ Sbjct: 108 FAQDAYTSMIVCKSL 122 [181][TOP] >UniRef100_B6YWR5 ERCC2/XPD/Rad3-related DNA repair helicase n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YWR5_THEON Length = 666 Score = 58.9 bits (141), Expect = 2e-07 Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 4/138 (2%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELA-KL 178 YFPYE + P Q ++ + + ++I+E PTG GKTV++L+ IL Y + E+ K+ Sbjct: 29 YFPYESLRPHQREFIELVNEAVKNGENAIIEAPTGFGKTVSVLAGILPYAI---EMGYKV 85 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKT--LAVGLTTRRNLCLHPA 352 +Y RT +MD+V+ EL+ A +RKT V L +R++LCLH Sbjct: 86 LYLARTHRQMDRVIEELK------------------AINRKTPISGVELRSRKDLCLHSY 127 Query: 353 VSS-ASSREEADALCRSM 403 ++ + A +C+++ Sbjct: 128 LTQFTTDAYNAMVVCKNL 145 [182][TOP] >UniRef100_Q8U2A6 DNA repair helicase rad3, putative n=1 Tax=Pyrococcus furiosus RepID=Q8U2A6_PYRFU Length = 631 Score = 58.5 bits (140), Expect = 2e-07 Identities = 36/120 (30%), Positives = 64/120 (53%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 YFPYE + P Q ++ +K + + I+E PTG GKT+++L+ +L Y + K+V Sbjct: 6 YFPYERLRPNQREFIEIVKEAVKRGENLIVEAPTGFGKTISVLAGVLPYAISLG--YKVV 63 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSS 361 Y RT +MD+V+ EL+++ R++ + + +RR+LCLH + + Sbjct: 64 YLARTHKQMDRVIEELKKI---RER-------------NEVSGIEFRSRRDLCLHSYIQT 107 [183][TOP] >UniRef100_A9BK43 Rad3 n=1 Tax=Cryptophyta RepID=A9BK43_9CRYP Length = 756 Score = 57.0 bits (136), Expect = 7e-07 Identities = 32/135 (23%), Positives = 63/135 (46%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLVY 184 FP+ ++PEQ M LK+ D + H I+ +P G G ++ + +SY KL+Y Sbjct: 12 FPFNIIFPEQIQLMYILKKLFDNKSHGIMGIPPGIGFSMVTICFFISYNFSTKLKKKLIY 71 Query: 185 CTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSA 364 C R + ++ + R L ++ F+ + + T+ G ++ LC+ + Sbjct: 72 CLRKEVDSISLIEQFRTYLGESNEKFS--IKNFEISPQITVPFG---KKTLCIEERLKPL 126 Query: 365 SSREEADALCRSMTA 409 + +E + C+S+ A Sbjct: 127 TKIDEIEDFCKSLLA 141 [184][TOP] >UniRef100_A4HHR4 Helicase, putative n=1 Tax=Leishmania braziliensis RepID=A4HHR4_LEIBR Length = 954 Score = 57.0 bits (136), Expect = 7e-07 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 18/148 (12%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSY-------QLYRP 163 FP++ YP Q +M + L + +LE PTGTGKT+ LL L++ ++RP Sbjct: 14 FPFD-PYPAQVEFMRSVVECLQHGFNGLLESPTGTGKTLCLLCSTLAWIAATSQDAIFRP 72 Query: 164 -----------ELAKLVYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLA 310 K+VYC+RT ++ +V+ ELRR + A R T+A Sbjct: 73 TSGREQKGRGMHTHKVVYCSRTHAQLTQVVRELRRT---------------SYAQRFTMA 117 Query: 311 VGLTTRRNLCLHPAVSSASSREEADALC 394 V L +R ++CL+ V+ S + + +C Sbjct: 118 V-LGSREHMCLNKEVTRLPSSQAQNTMC 144 [185][TOP] >UniRef100_A9CTC2 DNA repair helicase n=1 Tax=Enterocytozoon bieneusi H348 RepID=A9CTC2_ENTBH Length = 579 Score = 55.8 bits (133), Expect = 1e-06 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 10/143 (6%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQ----------L 154 FPYE +Y Q ++ D + + I PTGTGKT++LLS+ ++ L Sbjct: 6 FPYE-LYDIQNQFIDDAIKVISDGKIGIFSSPTGTGKTISLLSVCTNFAYHDNDNLYNLL 64 Query: 155 YRPELAKLVYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRN 334 + K+ YC+RT ++ +VL+EL + H + V L +R+ Sbjct: 65 FSANKTKIYYCSRTHTQLAQVLHELDTNIHHYN------------------TVILGSRKL 106 Query: 335 LCLHPAVSSASSREEADALCRSM 403 C+HP S+ + EE ++ C + Sbjct: 107 YCIHPIQSTCNDIEELNSKCHEL 129 [186][TOP] >UniRef100_Q9UZ12 ERCC2/XPD/rad3 DNA repair helicase, TFIIH helicase beta subunit homolog n=1 Tax=Pyrococcus abyssi RepID=Q9UZ12_PYRAB Length = 637 Score = 55.8 bits (133), Expect = 1e-06 Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 2/136 (1%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHS-ILEMPTGTGKTVTLLSLILSYQLYRPELAKL 178 YFPY+ + P Q + ++L R + RG I+E PTG GKT+++L+ +L + + K+ Sbjct: 4 YFPYKTLRPHQDEF-IELVRDVVKRGEKVIIEAPTGFGKTISVLAGVLPHAISFG--YKV 60 Query: 179 VYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVS 358 +Y RT +MD+V+ EL+R+ R A K + +R++LCLH + Sbjct: 61 IYLARTHKQMDRVIEELKRI--------------REIA--KVSGIEFRSRKDLCLHSYIR 104 Query: 359 S-ASSREEADALCRSM 403 + A + +C+S+ Sbjct: 105 TFAQDAYTSMIVCKSL 120 [187][TOP] >UniRef100_UPI0001B7B482 Rtel1 protein n=1 Tax=Rattus norvegicus RepID=UPI0001B7B482 Length = 1165 Score = 55.1 bits (131), Expect = 3e-06 Identities = 51/159 (32%), Positives = 71/159 (44%), Gaps = 23/159 (14%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLY-RPELAKLV 181 FP++ YP Q YM + L + + ILE PTGTGKT+ LL L+++ + R ++ L Sbjct: 13 FPFQ-PYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLRDAVSSLK 71 Query: 182 YCTRTVGEM--DKVLYELRRVL-AHRDK--CFAEDAPARAAASRK----TLAVG------ 316 R GE+ + L R A+ D C+ D P ASR T +G Sbjct: 72 IAERVQGELFASRTLSSWRSAADANGDSIDCYT-DIPKIIYASRTHSQLTQVIGELRNTS 130 Query: 317 -------LTTRRNLCLHPAVSSASSREEADALCRSMTAS 412 L +R LC+HP V S +LCR AS Sbjct: 131 YRPKVCVLGSREQLCIHPEVKKQESNHMQISLCRKKVAS 169 [188][TOP] >UniRef100_UPI0001B7B481 Rtel1 protein n=1 Tax=Rattus norvegicus RepID=UPI0001B7B481 Length = 1203 Score = 55.1 bits (131), Expect = 3e-06 Identities = 51/159 (32%), Positives = 71/159 (44%), Gaps = 23/159 (14%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLY-RPELAKLV 181 FP++ YP Q YM + L + + ILE PTGTGKT+ LL L+++ + R ++ L Sbjct: 13 FPFQ-PYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLRDAVSSLK 71 Query: 182 YCTRTVGEM--DKVLYELRRVL-AHRDK--CFAEDAPARAAASRK----TLAVG------ 316 R GE+ + L R A+ D C+ D P ASR T +G Sbjct: 72 IAERVQGELFASRTLSSWRSAADANGDSIDCYT-DIPKIIYASRTHSQLTQVIGELRNTS 130 Query: 317 -------LTTRRNLCLHPAVSSASSREEADALCRSMTAS 412 L +R LC+HP V S +LCR AS Sbjct: 131 YRPKVCVLGSREQLCIHPEVKKQESNHMQISLCRKKVAS 169 [189][TOP] >UniRef100_UPI0001B7B480 Rtel1 protein n=1 Tax=Rattus norvegicus RepID=UPI0001B7B480 Length = 488 Score = 55.1 bits (131), Expect = 3e-06 Identities = 51/159 (32%), Positives = 71/159 (44%), Gaps = 23/159 (14%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLY-RPELAKLV 181 FP++ YP Q YM + L + + ILE PTGTGKT+ LL L+++ + R ++ L Sbjct: 13 FPFQ-PYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLRDAVSSLK 71 Query: 182 YCTRTVGEM--DKVLYELRRVL-AHRDK--CFAEDAPARAAASRK----TLAVG------ 316 R GE+ + L R A+ D C+ D P ASR T +G Sbjct: 72 IAERVQGELFASRTLSSWRSAADANGDSIDCYT-DIPKIIYASRTHSQLTQVIGELRNTS 130 Query: 317 -------LTTRRNLCLHPAVSSASSREEADALCRSMTAS 412 L +R LC+HP V S +LCR AS Sbjct: 131 YRPKVCVLGSREQLCIHPEVKKQESNHMQISLCRKKVAS 169 [190][TOP] >UniRef100_Q5RJZ1-2 Isoform 2 of Regulator of telomere elongation helicase 1 n=1 Tax=Rattus norvegicus RepID=Q5RJZ1-2 Length = 1244 Score = 55.1 bits (131), Expect = 3e-06 Identities = 51/159 (32%), Positives = 71/159 (44%), Gaps = 23/159 (14%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLY-RPELAKLV 181 FP++ YP Q YM + L + + ILE PTGTGKT+ LL L+++ + R ++ L Sbjct: 13 FPFQ-PYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLRDAVSSLK 71 Query: 182 YCTRTVGEM--DKVLYELRRVL-AHRDK--CFAEDAPARAAASRK----TLAVG------ 316 R GE+ + L R A+ D C+ D P ASR T +G Sbjct: 72 IAERVQGELFASRTLSSWRSAADANGDSIDCYT-DIPKIIYASRTHSQLTQVIGELRNTS 130 Query: 317 -------LTTRRNLCLHPAVSSASSREEADALCRSMTAS 412 L +R LC+HP V S +LCR AS Sbjct: 131 YRPKVCVLGSREQLCIHPEVKKQESNHMQISLCRKKVAS 169 [191][TOP] >UniRef100_Q5RJZ1 Regulator of telomere elongation helicase 1 n=1 Tax=Rattus norvegicus RepID=RTEL1_RAT Length = 1274 Score = 55.1 bits (131), Expect = 3e-06 Identities = 51/159 (32%), Positives = 71/159 (44%), Gaps = 23/159 (14%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLY-RPELAKLV 181 FP++ YP Q YM + L + + ILE PTGTGKT+ LL L+++ + R ++ L Sbjct: 13 FPFQ-PYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLRDAVSSLK 71 Query: 182 YCTRTVGEM--DKVLYELRRVL-AHRDK--CFAEDAPARAAASRK----TLAVG------ 316 R GE+ + L R A+ D C+ D P ASR T +G Sbjct: 72 IAERVQGELFASRTLSSWRSAADANGDSIDCYT-DIPKIIYASRTHSQLTQVIGELRNTS 130 Query: 317 -------LTTRRNLCLHPAVSSASSREEADALCRSMTAS 412 L +R LC+HP V S +LCR AS Sbjct: 131 YRPKVCVLGSREQLCIHPEVKKQESNHMQISLCRKKVAS 169 [192][TOP] >UniRef100_Q4FXD6 Helicase, putative n=1 Tax=Leishmania major strain Friedlin RepID=Q4FXD6_LEIMA Length = 953 Score = 54.7 bits (130), Expect = 3e-06 Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 18/151 (11%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELA---- 172 FP++ YP Q +M + + L + +LE PTGTGKT+ LL L + + A Sbjct: 14 FPFD-PYPAQVEFMRSVVKCLQNGFNGLLESPTGTGKTLCLLCSTLGWLSATSQGAVLRH 72 Query: 173 --------------KLVYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLA 310 K+VYC+RT ++ +V+ EL+R + A R T+A Sbjct: 73 ASDQDQKGRGKHNHKVVYCSRTHAQLTQVVRELKRT---------------SYAQRFTMA 117 Query: 311 VGLTTRRNLCLHPAVSSASSREEADALCRSM 403 V L +R ++CL+ V+ S + A+C ++ Sbjct: 118 V-LGSREHMCLNKEVTRLPSSQAQHAMCSAL 147 [193][TOP] >UniRef100_Q5JH96 ERCC2/XPD/Rad3-related DNA repair helicase n=1 Tax=Thermococcus kodakarensis RepID=Q5JH96_PYRKO Length = 637 Score = 54.7 bits (130), Expect = 3e-06 Identities = 36/115 (31%), Positives = 60/115 (52%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELAKLV 181 YFPYE + P Q ++ + + ++I+E PTG GKT+++L+ +L + + K++ Sbjct: 4 YFPYENLRPNQREFIELIGEAVKNGENAIVEAPTGFGKTISVLAGVLPFA--KEYGYKVL 61 Query: 182 YCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLH 346 Y RT +MD+V+ EL+ + HR K V L +R+ LCLH Sbjct: 62 YLARTHRQMDRVIEELKAI--HRKK--------------PVSGVELRSRKELCLH 100 [194][TOP] >UniRef100_C4M8K7 DNA repair helicase, putative n=1 Tax=Entamoeba histolytica HM-1:IMSS RepID=C4M8K7_ENTHI Length = 770 Score = 54.3 bits (129), Expect = 4e-06 Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDL-----KRTLDARGHSILEMPTGTGKTVTLLSL---ILSYQLY 157 +FPY+F+YPEQY ++ + I+EM TGTGKTV++++ +L Q Sbjct: 22 HFPYQFIYPEQYQFIKTVTSGVTNNKKPPHKQIIIEMGTGTGKTVSIITAAKGLLDNQ-- 79 Query: 158 RPELAKLVYCTRTVGEMDKVLYELRRV 238 ++ +YCTRT+ E+ ++ EL ++ Sbjct: 80 GSNISHTIYCTRTIDEIKQIFNELTKL 106 [195][TOP] >UniRef100_B4MHZ2 GK23573 n=1 Tax=Drosophila willistoni RepID=B4MHZ2_DROWI Length = 216 Score = 54.3 bits (129), Expect = 4e-06 Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 4/136 (2%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSY----QLYRPEL 169 +FP+E Y Q A+M + L + +LE PTGTGKT++LL L L++ Q + + Sbjct: 12 HFPFE-PYEVQRAFMEKVIICLRDGTNGVLESPTGTGKTLSLLCLSLAWIRTRQSEQQGV 70 Query: 170 AKLVYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHP 349 K++Y +RT ++ + + EL+R A A +++ +G +R LC+HP Sbjct: 71 PKVIYASRTHSQLTQAMRELKR---------------SAYAGMRSVVLG--SRDQLCIHP 113 Query: 350 AVSSASSREEADALCR 397 V +C+ Sbjct: 114 EVMREQGNSNKVNMCK 129 [196][TOP] >UniRef100_A4I4X4 Helicase, putative n=1 Tax=Leishmania infantum RepID=A4I4X4_LEIIN Length = 953 Score = 54.3 bits (129), Expect = 4e-06 Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 18/151 (11%) Frame = +2 Query: 5 FPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELA---- 172 FP+E YP Q +M + + L + +LE PTGTGKT+ LL L + + A Sbjct: 14 FPFE-PYPAQVEFMRSVVKCLQHGFNGLLESPTGTGKTLCLLCSTLGWLAATSQGAVLRH 72 Query: 173 --------------KLVYCTRTVGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLA 310 K+VYC+RT ++ +V+ EL+R +CF T+A Sbjct: 73 TSDQDQKGRGKYNHKVVYCSRTHAQLTQVVRELKR--TSYAQCF-------------TMA 117 Query: 311 VGLTTRRNLCLHPAVSSASSREEADALCRSM 403 V L +R ++CL+ V+ S + A+C ++ Sbjct: 118 V-LGSREHMCLNKEVTRLPSSQAQHAMCSAL 147 [197][TOP] >UniRef100_A6R8S4 DNA repair helicase RAD3 n=1 Tax=Ajellomyces capsulatus NAm1 RepID=A6R8S4_AJECN Length = 683 Score = 54.3 bits (129), Expect = 4e-06 Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 2/86 (2%) Frame = +2 Query: 197 VGEMDKVLYELRRVLAHRDKC--FAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSASS 370 + E++K L EL+ ++ +R + FAED +GLT+R+NLCLHP+V S Sbjct: 1 MSEIEKALAELKALMKYRAQQLGFAEDFRG----------LGLTSRKNLCLHPSVKREKS 50 Query: 371 REEADALCRSMTASWARGDPEDIEDV 448 DA CRS+TA + + E EDV Sbjct: 51 GAVVDARCRSLTAGFVKEKKEKGEDV 76 [198][TOP] >UniRef100_Q0UFI9 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UFI9_PHANO Length = 724 Score = 53.9 bits (128), Expect = 6e-06 Identities = 30/84 (35%), Positives = 45/84 (53%) Frame = +2 Query: 197 VGEMDKVLYELRRVLAHRDKCFAEDAPARAAASRKTLAVGLTTRRNLCLHPAVSSASSRE 376 + E++K L EL+ ++ +R K + R +GLT+R+NLCLHP V S Sbjct: 1 MSEIEKALAELKNLMKYRTKELGYEEEFRG--------LGLTSRKNLCLHPTVKREKSGT 52 Query: 377 EADALCRSMTASWARGDPEDIEDV 448 D+ CRS+TA + + E EDV Sbjct: 53 VVDSKCRSLTAGFVKEKKERGEDV 76 [199][TOP] >UniRef100_UPI00006CAF08 DNA repair helicase (rad3) n=1 Tax=Tetrahymena thermophila RepID=UPI00006CAF08 Length = 1032 Score = 53.5 bits (127), Expect = 7e-06 Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 9/86 (10%) Frame = +2 Query: 2 YFPYEFVYPEQYAYMVDLKRTLDARGHSILEMPTGTGKTVTLLSLILSYQLYRPELA--- 172 YFP++ Y Q YM + + L R H +LE PTGTGKT+++L L + R E Sbjct: 74 YFPHK-PYDVQVVYMESVIKCLQERTHGLLESPTGTGKTLSMLCACLGWLQQRREQQQGI 132 Query: 173 ------KLVYCTRTVGEMDKVLYELR 232 +++YC+RT ++ +V+ E++ Sbjct: 133 KDIIPNRIIYCSRTHSQIQQVVKEIK 158 [200][TOP] >UniRef100_B0ETH3 DNA repair helicase rad3/xp-D, putative n=1 Tax=Entamoeba dispar SAW760 RepID=B0ETH3_ENTDI Length = 788 Score = 53.5 bits (127), Expect = 7e-06 Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 10/89 (11%) Frame = +2 Query: 2 YFPYEFVYPEQYAY-------MVDLKRTLDARGHSILEMPTGTGKTVTLLSL---ILSYQ 151 +FPY+F+YPEQY + + D K+ I+EM +GTGKTV++++ +L Q Sbjct: 21 HFPYQFIYPEQYQFIKTVTSGVTDNKK--PPHKQIIIEMGSGTGKTVSIITAAKGLLDNQ 78 Query: 152 LYRPELAKLVYCTRTVGEMDKVLYELRRV 238 ++ +YCTRT+ E+ +V EL ++ Sbjct: 79 --GSNISHTIYCTRTIDEIKRVFNELTKL 105 [201][TOP] >UniRef100_C4M8Q4 DNA repair helicase, putative n=1 Tax=Entamoeba histolytica HM-1:IMSS RepID=C4M8Q4_ENTHI Length = 788 Score = 53.1 bits (126), Expect = 1e-05 Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 10/89 (11%) Frame = +2 Query: 2 YFPYEFVYPEQYAY-------MVDLKRTLDARGHSILEMPTGTGKTVTLLSL---ILSYQ 151 +FPY+F+YPEQY + + D K+ I+EM TG+GKTV++++ +L Q Sbjct: 21 HFPYQFIYPEQYQFIKTVTSGVTDNKK--PPHKQIIIEMGTGSGKTVSIITAAKGLLDNQ 78 Query: 152 LYRPELAKLVYCTRTVGEMDKVLYELRRV 238 ++ +YCTRT+ E+ ++ EL ++ Sbjct: 79 --GSNISHTIYCTRTIDEIKRIFNELTKL 105