[UP]
[1][TOP]
>UniRef100_O04142 DNA-directed RNA polymerase (Fragment) n=1 Tax=Porphyra yezoensis
RepID=O04142_PORYE
Length = 1685
Score = 373 bits (957), Expect = e-102
Identities = 179/179 (100%), Positives = 179/179 (100%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY
Sbjct: 345 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 404
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD
Sbjct: 405 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 464
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDD 538
TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDD
Sbjct: 465 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDD 523
[2][TOP]
>UniRef100_O09451 DNA-directed RNA polymerase (Fragment) n=1 Tax=Bonnemaisonia
hamifera RepID=O09451_9FLOR
Length = 1732
Score = 313 bits (803), Expect = 4e-84
Identities = 144/179 (80%), Positives = 164/179 (91%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
RNR+++QLE+GYKV+RHI +GD+++FNRQPSLHKMSIMGHRI+V+PYSTFRLNLSVTSPY
Sbjct: 327 RNRSELQLELGYKVIRHIRDGDYVLFNRQPSLHKMSIMGHRIRVLPYSTFRLNLSVTSPY 386
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQTH TRAEV ELM+VP CIVSPQGNKPVMGIVQDTLLGCMLFT RD
Sbjct: 387 NADFDGDEMNLHVPQTHQTRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRD 446
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDD 538
TFL RD+ M+LL+HV WDGVIP PAI KP PLWTGKQ+FSL+LP VN++R+ THPDD
Sbjct: 447 TFLERDLMMNLLMHVGDWDGVIPKPAIYKPRPLWTGKQVFSLILPPVNIIRFNITHPDD 505
[3][TOP]
>UniRef100_Q9AXN1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Botryocladia
uvarioides RepID=Q9AXN1_9FLOR
Length = 1712
Score = 305 bits (782), Expect = 1e-81
Identities = 140/178 (78%), Positives = 159/178 (89%)
Frame = +2
Query: 5 NRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYN 184
+R LEIG+KV+RHI +GD+++FNRQPSLHKMSIMGHRI+V+PYSTFRLNLSVTSPYN
Sbjct: 329 DRTSTNLEIGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVLPYSTFRLNLSVTSPYN 388
Query: 185 ADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDT 364
ADFDGDEMNLHVPQ+H TRAEV ELM+VP CIVSPQGNKPVMGIVQDTLLGCMLFT RDT
Sbjct: 389 ADFDGDEMNLHVPQSHGTRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDT 448
Query: 365 FLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDD 538
F+ RDV M+LL+HV WDGV+P PAI KP PLWTGKQ+FSL+LP VNL+RY THPD+
Sbjct: 449 FIERDVMMNLLMHVGDWDGVVPEPAIYKPRPLWTGKQIFSLILPPVNLIRYNITHPDE 506
[4][TOP]
>UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata
RepID=Q9AXN0_9RHOD
Length = 1746
Score = 299 bits (766), Expect = 7e-80
Identities = 137/179 (76%), Positives = 159/179 (88%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+NR+D+ L G KV+RH+ +GD+++FNRQPSLHKMSIMGHR+KVM YS+FRLNLS TSPY
Sbjct: 405 KNRSDIHLNNGEKVIRHLLDGDYVIFNRQPSLHKMSIMGHRVKVMRYSSFRLNLSCTSPY 464
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ RAEVM+LMMVPRCIVSPQGNKPVMGIVQDTL+G MLFT RD
Sbjct: 465 NADFDGDEMNLHVPQSPQARAEVMQLMMVPRCIVSPQGNKPVMGIVQDTLVGTMLFTQRD 524
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDD 538
TF+ +D+ M+LLLH GWDGVIPPPAI+KP LWTGKQLFS++LPDVNLVR+ NTH DD
Sbjct: 525 TFMEKDLVMNLLLHFRGWDGVIPPPAILKPRQLWTGKQLFSMILPDVNLVRFSNTHDDD 583
[5][TOP]
>UniRef100_O61119 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dictyostelium
discoideum RepID=O61119_DICDI
Length = 757
Score = 278 bits (711), Expect = 2e-73
Identities = 128/175 (73%), Positives = 152/175 (86%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D LE GYKV RHI +GD ++FNRQPSLHKMS+MGHRIKVMPYSTFRLNLSVTSPYNAD
Sbjct: 353 SDTHLECGYKVERHINDGDVVIFNRQPSLHKMSMMGHRIKVMPYSTFRLNLSVTSPYNAD 412
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQT TRAEV+E+MMVPR IVSPQ N+PVMGIVQDTLLG LFT RD F+
Sbjct: 413 FDGDEMNLHVPQTLETRAEVIEIMMVPRQIVSPQSNRPVMGIVQDTLLGSRLFTKRDCFM 472
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPD 535
+D+ M++L+ + WDG +PPPAI+KP+ LWTGKQLFSL++PD+NL+R+ +TH D
Sbjct: 473 EKDLVMNILMWLPSWDGKVPPPAILKPKQLWTGKQLFSLIIPDINLIRFTSTHND 527
[6][TOP]
>UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium
discoideum RepID=RPB1_DICDI
Length = 1727
Score = 278 bits (711), Expect = 2e-73
Identities = 128/175 (73%), Positives = 152/175 (86%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D LE GYKV RHI +GD ++FNRQPSLHKMS+MGHRIKVMPYSTFRLNLSVTSPYNAD
Sbjct: 427 SDTHLECGYKVERHINDGDVVIFNRQPSLHKMSMMGHRIKVMPYSTFRLNLSVTSPYNAD 486
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQT TRAEV+E+MMVPR IVSPQ N+PVMGIVQDTLLG LFT RD F+
Sbjct: 487 FDGDEMNLHVPQTLETRAEVIEIMMVPRQIVSPQSNRPVMGIVQDTLLGSRLFTKRDCFM 546
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPD 535
+D+ M++L+ + WDG +PPPAI+KP+ LWTGKQLFSL++PD+NL+R+ +TH D
Sbjct: 547 EKDLVMNILMWLPSWDGKVPPPAILKPKQLWTGKQLFSLIIPDINLIRFTSTHND 601
[7][TOP]
>UniRef100_C5Y387 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5Y387_SORBI
Length = 1874
Score = 273 bits (699), Expect = 4e-72
Identities = 125/180 (69%), Positives = 154/180 (85%), Gaps = 1/180 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 432 KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 491
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ NKPVMGIVQDTLLGC T RD
Sbjct: 492 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNKPVMGIVQDTLLGCRKITKRD 551
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
T + +DV M++L+ E +DG IP PAI+KP P+WTGKQ+F+L++P +NL+R+C+ H D+
Sbjct: 552 TLIEKDVFMNILMWWEDFDGKIPAPAILKPRPIWTGKQVFNLIIPRQINLIRFCSWHSDE 611
[8][TOP]
>UniRef100_B7SNX1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nicotiana tabacum
RepID=B7SNX1_TOBAC
Length = 1010
Score = 270 bits (689), Expect = 6e-71
Identities = 125/179 (69%), Positives = 152/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 351 KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 410
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 411 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRD 470
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG +P PAI+KP PLWTGKQ+F+L++P +NL+RY H D
Sbjct: 471 TFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHND 529
[9][TOP]
>UniRef100_Q71ET5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nymphaea odorata
RepID=Q71ET5_NYMOD
Length = 1013
Score = 269 bits (687), Expect = 1e-70
Identities = 126/179 (70%), Positives = 151/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
R +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 354 RKSSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 413
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 414 NADFDGDEMNMHVPQCFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 473
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG IP PAI+KP PLWTGKQ+F+L++P +NL+RY H +
Sbjct: 474 TFIEKDVFMNILMWWEDFDGKIPAPAIMKPRPLWTGKQVFNLIIPKQINLIRYSAWHSE 532
[10][TOP]
>UniRef100_Q2PYQ2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharella sp.
M15 RepID=Q2PYQ2_9FUNG
Length = 547
Score = 269 bits (687), Expect = 1e-70
Identities = 121/176 (68%), Positives = 149/176 (84%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L +G +V RHI +GD+++FNRQPSLHKMS+MGHR++VMPYSTFRLNLSVTSPYNAD
Sbjct: 151 SDILLNVGDRVERHILDGDYVIFNRQPSLHKMSMMGHRVRVMPYSTFRLNLSVTSPYNAD 210
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH PQ++ TRAE+ E+M VPR I+SP+ N+PVMGIVQDTL G FT RD F+
Sbjct: 211 FDGDEMNLHAPQSYETRAEIQEIMQVPRQIISPKHNQPVMGIVQDTLCGIRKFTLRDNFM 270
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDD 538
RD+ M++L+ V+GWDGV+P PAIIKP PLWTGKQL S ++PDVNLV + THPDD
Sbjct: 271 TRDMVMNILMWVDGWDGVVPAPAIIKPTPLWTGKQLLSXIIPDVNLVGFAATHPDD 326
[11][TOP]
>UniRef100_Q71ET4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Amborella trichopoda
RepID=Q71ET4_AMBTC
Length = 1013
Score = 268 bits (685), Expect = 2e-70
Identities = 125/179 (69%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ D LE+GYKV RH+ +GDF+ FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 354 KKSGDHHLELGYKVERHLNDGDFVFFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 413
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 414 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 473
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG IP PAI+KP PLWTGKQ+F+L++P +NL+RY H +
Sbjct: 474 TFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLIRYSAWHSE 532
[12][TOP]
>UniRef100_Q2TUN7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Podocarpus
macrophyllus RepID=Q2TUN7_9CONI
Length = 1013
Score = 268 bits (685), Expect = 2e-70
Identities = 124/179 (69%), Positives = 152/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRI++MPYSTFRLNLSVTSPY
Sbjct: 354 KKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPY 413
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 414 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 473
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG IP PAI+KP PLWTGKQ+F+L++P +NL+RY H +
Sbjct: 474 TFIEKDVFMNILMWWEDFDGKIPSPAILKPRPLWTGKQVFNLIIPKQINLIRYSAWHAE 532
[13][TOP]
>UniRef100_Q1L5Y7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Antirrhinum majus
RepID=Q1L5Y7_ANTMA
Length = 780
Score = 268 bits (685), Expect = 2e-70
Identities = 123/179 (68%), Positives = 152/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D+ LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 109 KKSSDMHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 168
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 169 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRD 228
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG +P P I+KP PLWTGKQ+F+L++P +NL+RY H +
Sbjct: 229 TFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQE 287
[14][TOP]
>UniRef100_B7SNX4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pisum sativum
RepID=B7SNX4_PEA
Length = 1010
Score = 268 bits (685), Expect = 2e-70
Identities = 123/177 (69%), Positives = 152/177 (85%), Gaps = 1/177 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 351 KKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 410
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQD+LLGC T RD
Sbjct: 411 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDSLLGCRKITKRD 470
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTH 529
TF+ +DV M++L+ E +DG +P P I+KPEPLWTGKQ+F+L++P +NL+RY + H
Sbjct: 471 TFIAKDVFMNILMWWEDFDGKVPAPTILKPEPLWTGKQVFNLIIPKQINLIRYSSWH 527
[15][TOP]
>UniRef100_Q71EU1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Zamia muricata
RepID=Q71EU1_9SPER
Length = 1013
Score = 268 bits (684), Expect = 2e-70
Identities = 124/179 (69%), Positives = 151/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 354 KKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 413
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 414 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 473
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG IP P I+KP PLWTGKQ+F+L++P +NL+RY H +
Sbjct: 474 TFIEKDVFMNILMWWEDFDGKIPSPTILKPRPLWTGKQVFNLIIPRQINLIRYSAWHSE 532
[16][TOP]
>UniRef100_Q2TUN5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ephedra viridis
RepID=Q2TUN5_EPHVI
Length = 1013
Score = 268 bits (684), Expect = 2e-70
Identities = 123/177 (69%), Positives = 151/177 (85%), Gaps = 1/177 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 354 KRSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 413
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAE++ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 414 NADFDGDEMNMHVPQSFETRAEILELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 473
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTH 529
TF+ +DV M++L+ E +DG +P PAI+KP P+WTGKQ+F+L++P +NLVRY H
Sbjct: 474 TFIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKQINLVRYSAWH 530
[17][TOP]
>UniRef100_Q2PYP9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix sp.
GE13 RepID=Q2PYP9_9FUNG
Length = 813
Score = 268 bits (684), Expect = 2e-70
Identities = 122/174 (70%), Positives = 147/174 (84%)
Frame = +2
Query: 17 VQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFD 196
V L++GYKV RHI +GD ++FNRQPSLHKMS+MGH+IKVMPYSTFRLNLSVTSPYNADFD
Sbjct: 157 VHLQVGYKVERHINDGDLVIFNRQPSLHKMSMMGHKIKVMPYSTFRLNLSVTSPYNADFD 216
Query: 197 GDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRR 376
GDEMNLHVPQ++ T+AEV E+ MVP+ IVSPQ NKPVMGIVQDTL G FT RD FL R
Sbjct: 217 GDEMNLHVPQSYETKAEVQEICMVPKQIVSPQANKPVMGIVQDTLCGIRKFTKRDCFLTR 276
Query: 377 DVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDD 538
D M++++ V WDGV+PPP I+KP PLWTGKQ+ SL++P +N+V Y +THPD+
Sbjct: 277 DFVMNIIMWVPDWDGVVPPPCILKPIPLWTGKQIMSLIIPKINIVGYHSTHPDN 330
[18][TOP]
>UniRef100_A1YIC6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix
frontalis RepID=A1YIC6_NEOFR
Length = 1004
Score = 268 bits (684), Expect = 2e-70
Identities = 122/174 (70%), Positives = 147/174 (84%)
Frame = +2
Query: 17 VQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFD 196
V L++GYKV RHI +GD ++FNRQPSLHKMS+MGH+IKVMPYSTFRLNLSVTSPYNADFD
Sbjct: 343 VHLQVGYKVERHINDGDLVIFNRQPSLHKMSMMGHKIKVMPYSTFRLNLSVTSPYNADFD 402
Query: 197 GDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRR 376
GDEMNLHVPQ++ T+AEV E+ MVP+ IVSPQ NKPVMGIVQDTL G FT RD FL R
Sbjct: 403 GDEMNLHVPQSYETKAEVQEICMVPKQIVSPQANKPVMGIVQDTLCGIRKFTKRDCFLTR 462
Query: 377 DVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDD 538
D M++++ V WDGV+PPP I+KP PLWTGKQ+ SL++P +N+V Y +THPD+
Sbjct: 463 DFVMNIIMWVPDWDGVVPPPCILKPIPLWTGKQIMSLIIPKINIVGYHSTHPDN 516
[19][TOP]
>UniRef100_Q30BD9 DNA-directed RNA polymerase n=1 Tax=Glaucocystis nostochinearum
RepID=Q30BD9_9EUKA
Length = 1852
Score = 267 bits (683), Expect = 3e-70
Identities = 119/179 (66%), Positives = 152/179 (84%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D+ LE GY+V RHI +GD+++FNRQPSLHKMSIMGHR+KVMPYSTFRLNLSVT+PY
Sbjct: 425 KKASDLHLEPGYRVERHIQDGDYVLFNRQPSLHKMSIMGHRVKVMPYSTFRLNLSVTTPY 484
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HV QT TRAEV E+ +VPR I+SPQ N+PVMGIVQDTL+ T RD
Sbjct: 485 NADFDGDEMNMHVAQTFETRAEVQEICLVPRQIISPQSNRPVMGIVQDTLMASQKMTIRD 544
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDD 538
TF+ +DV M++L+H++ +DG +P PAI+KP PLWTGKQLF++ LP+VNL+R+C+ HPD+
Sbjct: 545 TFIEKDVVMNILMHLDSFDGRLPIPAILKPRPLWTGKQLFTMFLPNVNLIRFCSQHPDN 603
[20][TOP]
>UniRef100_Q2TUN6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba
RepID=Q2TUN6_GINBI
Length = 1013
Score = 267 bits (683), Expect = 3e-70
Identities = 124/179 (69%), Positives = 151/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 354 KKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 413
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 414 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKVTKRD 473
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG IP P I+KP PLWTGKQ+F+L++P +NL+RY H +
Sbjct: 474 TFIEKDVFMNILMWWEDFDGKIPSPTILKPRPLWTGKQVFNLIIPRQINLIRYSAWHSE 532
[21][TOP]
>UniRef100_Q1L5Y6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum lycopersicum
RepID=Q1L5Y6_SOLLC
Length = 773
Score = 267 bits (683), Expect = 3e-70
Identities = 124/179 (69%), Positives = 151/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 109 KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 168
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 169 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKVTKRD 228
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG +P P I+KP PLWTGKQ+F+L++P +NL+RY H D
Sbjct: 229 TFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQINLLRYSVWHND 287
[22][TOP]
>UniRef100_B9SXC0 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9SXC0_RICCO
Length = 1855
Score = 267 bits (683), Expect = 3e-70
Identities = 124/179 (69%), Positives = 151/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 432 KKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 491
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 492 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 551
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG +P PAI+KP PLWTGKQ+F+L++P +NL+R H D
Sbjct: 552 TFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLIRTAAWHSD 610
[23][TOP]
>UniRef100_P18616 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Arabidopsis
thaliana RepID=RPB1_ARATH
Length = 1840
Score = 267 bits (683), Expect = 3e-70
Identities = 124/179 (69%), Positives = 151/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRI++MPYSTFRLNLSVTSPY
Sbjct: 434 KKSSDQHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPY 493
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 494 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRD 553
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M+ L+ E +DG +P PAI+KP PLWTGKQ+F+L++P +NL+RY H D
Sbjct: 554 TFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHAD 612
[24][TOP]
>UniRef100_Q71EU0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cycas revoluta
RepID=Q71EU0_CYCRE
Length = 1013
Score = 266 bits (681), Expect = 5e-70
Identities = 123/179 (68%), Positives = 151/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRI++MPYSTFRLNLSVTSPY
Sbjct: 354 KKSSDHHLELGYKVERHLMDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPY 413
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 414 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 473
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG IP P I+KP PLWTGKQ+F+L++P +NL+RY H +
Sbjct: 474 TFIEKDVFMNILMWWENFDGKIPSPTILKPRPLWTGKQVFNLIIPRQINLIRYSAWHSE 532
[25][TOP]
>UniRef100_Q2TUN9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Thuja occidentalis
RepID=Q2TUN9_THUOC
Length = 1013
Score = 266 bits (681), Expect = 5e-70
Identities = 123/179 (68%), Positives = 151/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRI++MPYSTFRLNLSVTSPY
Sbjct: 354 KKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPY 413
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 414 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 473
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG IP P I+KP PLWTGKQ+F+L++P +NL+RY H +
Sbjct: 474 TFIEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLIRYSAWHAE 532
[26][TOP]
>UniRef100_B7SNW8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drimys winteri
RepID=B7SNW8_DRIWI
Length = 1010
Score = 266 bits (679), Expect = 9e-70
Identities = 123/179 (68%), Positives = 151/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 351 KKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 410
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 411 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 470
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG +P PAI+KP PLWTGKQ+F+L++P +NL+R H +
Sbjct: 471 TFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLIRQSAWHSE 529
[27][TOP]
>UniRef100_Q2PYR0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Boothiomyces
macroporosum RepID=Q2PYR0_9FUNG
Length = 999
Score = 266 bits (679), Expect = 9e-70
Identities = 120/175 (68%), Positives = 147/175 (84%)
Frame = +2
Query: 14 DVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADF 193
D+ L+ GYKV RH+ + D+I+FNRQPSLHKMS+MGHR+K+MPYSTFRLNLSVTSPYNADF
Sbjct: 343 DIHLQYGYKVERHLLDDDYIIFNRQPSLHKMSMMGHRVKIMPYSTFRLNLSVTSPYNADF 402
Query: 194 DGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLR 373
DGDEMNLHVPQ+H TRAE+ +L MVP+ IVSPQ N PVMGIVQDTL G FT RDTFL
Sbjct: 403 DGDEMNLHVPQSHETRAEIQQLCMVPKQIVSPQKNAPVMGIVQDTLCGIRKFTKRDTFLH 462
Query: 374 RDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDD 538
RD+ M+LL+ V WDG+IP PAI+KP PLWT KQ+ S+++P +N++ + +THPDD
Sbjct: 463 RDLLMNLLMWVPNWDGIIPMPAILKPIPLWTAKQVMSIIIPQINMIGFHSTHPDD 517
[28][TOP]
>UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000E12351
Length = 2085
Score = 265 bits (678), Expect = 1e-69
Identities = 121/179 (67%), Positives = 151/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 433 KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 492
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 493 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 552
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
T + +DV M++L+ E +DG +P PAI+KP P+WTGKQ+F+L++P +NL+R+ H +
Sbjct: 553 TLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKQINLIRFSGWHSE 611
[29][TOP]
>UniRef100_Q5WMZ9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q5WMZ9_ORYSJ
Length = 1741
Score = 265 bits (678), Expect = 1e-69
Identities = 121/179 (67%), Positives = 151/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 380 KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 439
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 440 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 499
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
T + +DV M++L+ E +DG +P PAI+KP P+WTGKQ+F+L++P +NL+R+ H +
Sbjct: 500 TLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKQINLIRFSGWHSE 558
[30][TOP]
>UniRef100_Q0DKN9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q0DKN9_ORYSJ
Length = 1834
Score = 265 bits (678), Expect = 1e-69
Identities = 121/179 (67%), Positives = 151/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 433 KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 492
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 493 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 552
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
T + +DV M++L+ E +DG +P PAI+KP P+WTGKQ+F+L++P +NL+R+ H +
Sbjct: 553 TLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKQINLIRFSGWHSE 611
[31][TOP]
>UniRef100_B7SNX0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Liriodendron
tulipifera RepID=B7SNX0_LIRTU
Length = 1010
Score = 265 bits (678), Expect = 1e-69
Identities = 123/179 (68%), Positives = 151/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 351 KKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 410
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 411 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 470
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG IP PA++KP PLWTGKQ+F+L++P +NL+R H +
Sbjct: 471 TFIEKDVFMNILMWWEDFDGKIPAPAVLKPRPLWTGKQVFNLIIPKQINLIRTSAWHSE 529
[32][TOP]
>UniRef100_UPI0001985649 PREDICTED: similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA
binding / DNA-directed RNA polymerase n=1 Tax=Vitis
vinifera RepID=UPI0001985649
Length = 1848
Score = 265 bits (677), Expect = 2e-69
Identities = 124/179 (69%), Positives = 151/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 432 KKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 491
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 492 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 551
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG IP PAI+KP PLWTGKQ+F+L++P +NL+R H +
Sbjct: 552 TFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSE 610
[33][TOP]
>UniRef100_C5YGY9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5YGY9_SORBI
Length = 1857
Score = 265 bits (676), Expect = 2e-69
Identities = 121/180 (67%), Positives = 152/180 (84%), Gaps = 1/180 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 431 KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 490
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 491 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 550
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
T + +DV M++L+ + +DG IP PAI+KP P+WTGKQ+F+L++P +NL+R+ H ++
Sbjct: 551 TLIEKDVFMNILMWWQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQINLIRFSAWHSEE 610
[34][TOP]
>UniRef100_B7SNW9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Illicium parviflorum
RepID=B7SNW9_ILLPA
Length = 1013
Score = 265 bits (676), Expect = 2e-69
Identities = 123/179 (68%), Positives = 151/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GD+++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 354 KKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 413
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 414 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 473
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG IP PAI+KP PLWTGKQ+F+L++P +NL+R H +
Sbjct: 474 TFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLIRTSAWHSE 532
[35][TOP]
>UniRef100_Q84KP6 DNA-directed RNA polymerase n=1 Tax=Cyanidioschyzon merolae
RepID=Q84KP6_CYAME
Length = 1819
Score = 264 bits (675), Expect = 3e-69
Identities = 126/179 (70%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
R AD+ LE G V RH+ NGD ++FNRQPSLH+MSIMGHR++++PYSTFR+NLS TSPY
Sbjct: 428 RRSADIVLEPGCVVERHLLNGDLVLFNRQPSLHRMSIMGHRVRILPYSTFRMNLSATSPY 487
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ RAE+ ELM VP+ IVSPQ N+PVMGIVQD+LLGCMLFT RD
Sbjct: 488 NADFDGDEMNLHVPQSEEVRAEIKELMAVPKNIVSPQANRPVMGIVQDSLLGCMLFTLRD 547
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPD-VNLVRYCNTHPD 535
TFL D +LLLH+ +DG IP PAI+KP PLWTGKQ+FSLLLPD VNL R N HPD
Sbjct: 548 TFLEEDTVFNLLLHLPHFDGRIPAPAILKPRPLWTGKQIFSLLLPDGVNLERLSNGHPD 606
[36][TOP]
>UniRef100_Q71ET6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Magnolia x
soulangeana RepID=Q71ET6_MAGSO
Length = 1010
Score = 264 bits (675), Expect = 3e-69
Identities = 123/179 (68%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 351 KKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 410
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 411 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 470
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG IP P I+KP PLWTGKQ+F+L++P +NL+R H +
Sbjct: 471 TFIEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLIRTSAWHSE 529
[37][TOP]
>UniRef100_B9FZ53 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FZ53_ORYSJ
Length = 804
Score = 264 bits (675), Expect = 3e-69
Identities = 121/179 (67%), Positives = 151/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 363 KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 422
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 423 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 482
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
T + +DV M++L+ E +DG +P PAI+KP P+WTGKQ+F+L++P +NL+R+ H +
Sbjct: 483 TLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKPINLIRFSAWHSE 541
[38][TOP]
>UniRef100_B8BAW1 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group
RepID=B8BAW1_ORYSI
Length = 1449
Score = 264 bits (675), Expect = 3e-69
Identities = 121/179 (67%), Positives = 151/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 402 KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 461
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 462 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 521
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
T + +DV M++L+ E +DG +P PAI+KP P+WTGKQ+F+L++P +NL+R+ H +
Sbjct: 522 TLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKPINLIRFSAWHSE 580
[39][TOP]
>UniRef100_B7SNW7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ceratophyllum
demersum RepID=B7SNW7_CERDE
Length = 1010
Score = 264 bits (675), Expect = 3e-69
Identities = 123/179 (68%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 351 KKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 410
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 411 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 470
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG IP P I+KP PLWTGKQ+F+L++P +NL+R H +
Sbjct: 471 TFIEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLIRTSAWHSE 529
[40][TOP]
>UniRef100_A4S3M0 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus
CCE9901 RepID=A4S3M0_OSTLU
Length = 1646
Score = 264 bits (675), Expect = 3e-69
Identities = 119/171 (69%), Positives = 148/171 (86%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ ++ +LE GYKV RH+ NGD ++FNRQPSLHKMSIMGHR+++MPYSTFRLNLSVT PY
Sbjct: 409 KKSSEKRLEYGYKVERHMVNGDVVLFNRQPSLHKMSIMGHRVRIMPYSTFRLNLSVTPPY 468
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+H+PQ++ TRAEV ELMMVP+ IVSPQ NKPVM IVQDTLLGC L T RD
Sbjct: 469 NADFDGDEMNMHLPQSYETRAEVKELMMVPKMIVSPQANKPVMAIVQDTLLGCRLITKRD 528
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVR 514
TF+ +DV M++++ +E WDG +P PAI+KP+PLWTGKQ+FS++LP VNL+R
Sbjct: 529 TFITKDVFMNIIMWLEDWDGKVPKPAILKPQPLWTGKQVFSMMLPKVNLLR 579
[41][TOP]
>UniRef100_Q2PYS9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhizoclosmatium sp.
JEL347-h RepID=Q2PYS9_9FUNG
Length = 573
Score = 264 bits (675), Expect = 3e-69
Identities = 124/175 (70%), Positives = 144/175 (82%)
Frame = +2
Query: 14 DVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADF 193
D+QL+ GYKV RH+ + D I+FNRQPSLHKMS+MGHR+KVMPYSTFRLNLSVT+PYNADF
Sbjct: 189 DLQLQYGYKVERHLVDDDLIIFNRQPSLHKMSMMGHRVKVMPYSTFRLNLSVTTPYNADF 248
Query: 194 DGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLR 373
DGDEMNLHVPQTH TRAEV EL MVPR IVSPQ N P MGIVQDTL G FT RD FL
Sbjct: 249 DGDEMNLHVPQTHETRAEVQELCMVPRQIVSPQKNAPCMGIVQDTLCGVRKFTKRDNFLP 308
Query: 374 RDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDD 538
RD+ M++L+ V WDGVIP PAI+KP PLWTGKQ+ SL++P +N+ + + HPDD
Sbjct: 309 RDLVMNILMWVPDWDGVIPTPAILKPVPLWTGKQMMSLIIPKINIEGFHSQHPDD 363
[42][TOP]
>UniRef100_Q71ET3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Psilotum nudum
RepID=Q71ET3_PSINU
Length = 1013
Score = 264 bits (674), Expect = 3e-69
Identities = 122/179 (68%), Positives = 152/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGH+I++MP+STFRLNLSVTSPY
Sbjct: 354 KKSSDRHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHKIRIMPFSTFRLNLSVTSPY 413
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PV+GIVQDTLLGC T RD
Sbjct: 414 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVIGIVQDTLLGCRKVTKRD 473
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG IP P I+KP+PLWTGKQLFSL++P +NL+R+ H D
Sbjct: 474 TFIEKDVFMNILMWWEDFDGKIPAPTILKPKPLWTGKQLFSLIIPKQINLIRFSAWHLD 532
[43][TOP]
>UniRef100_Q2TUN8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Taxus canadensis
RepID=Q2TUN8_TAXCA
Length = 1013
Score = 263 bits (673), Expect = 4e-69
Identities = 122/179 (68%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRI++MPYSTFRLNLSVTSPY
Sbjct: 354 KKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPY 413
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 414 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 473
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG IP P I+KP PLWTGKQ+F+L++P +NL+R H +
Sbjct: 474 TFIEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLIRQSAWHAE 532
[44][TOP]
>UniRef100_B7SNX5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Saruma henryi
RepID=B7SNX5_SARHE
Length = 1009
Score = 263 bits (673), Expect = 4e-69
Identities = 122/179 (68%), Positives = 151/179 (84%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GD+++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 350 KKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 409
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 410 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 469
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG IP PA++KP PLWTGKQ+F+L++P +NL+R H +
Sbjct: 470 TFIEKDVFMNILMWWEDFDGKIPAPAVLKPRPLWTGKQVFNLIIPKQINLLRTSAWHAE 528
[45][TOP]
>UniRef100_B7SNX3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Persea americana
RepID=B7SNX3_PERAE
Length = 1009
Score = 263 bits (673), Expect = 4e-69
Identities = 123/179 (68%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 350 KKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 409
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 410 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 469
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG IP PAI+KP PLWTGKQ+F+L++P +NL+ H +
Sbjct: 470 TFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLIXTSAWHSE 528
[46][TOP]
>UniRef100_B7SNX2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Papaver orientale
RepID=B7SNX2_PAPOR
Length = 1010
Score = 263 bits (673), Expect = 4e-69
Identities = 122/180 (67%), Positives = 151/180 (83%), Gaps = 1/180 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 351 KKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 410
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 411 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 470
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
TF+ +DV M++L+ E +DG +P P I+KP PLWTGKQ+F+L++P +NL+R H ++
Sbjct: 471 TFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSEN 530
[47][TOP]
>UniRef100_B7SNW5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Asparagus
officinalis RepID=B7SNW5_ASPOF
Length = 1009
Score = 263 bits (673), Expect = 4e-69
Identities = 123/179 (68%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 352 KKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 411
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 412 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 471
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG +P PAI+KP PLWTGKQ+F+L++P +NL R H +
Sbjct: 472 TFIEKDVFMNILMWWEDFDGKVPTPAILKPRPLWTGKQVFNLIIPKQINLSRASAWHSE 530
[48][TOP]
>UniRef100_Q71ET7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Zea mays
RepID=Q71ET7_MAIZE
Length = 1009
Score = 263 bits (672), Expect = 6e-69
Identities = 120/180 (66%), Positives = 151/180 (83%), Gaps = 1/180 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 350 KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 409
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 410 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 469
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
T + +DV M++L+ + +DG IP P I+KP P+WTGKQ+F+L++P +NL+R+ H ++
Sbjct: 470 TLIEKDVFMNILMWWQDFDGKIPAPTILKPRPIWTGKQVFNLIIPKQINLIRFSAWHSEE 529
[49][TOP]
>UniRef100_Q010D7 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri
RepID=Q010D7_OSTTA
Length = 1673
Score = 263 bits (672), Expect = 6e-69
Identities = 119/171 (69%), Positives = 148/171 (86%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ ++ +LE GYKV RH+ NGD ++FNRQPSLHKMSIMGHR+++MPYSTFRLNLSVT PY
Sbjct: 429 KKASEKRLEYGYKVERHMVNGDVVLFNRQPSLHKMSIMGHRVRIMPYSTFRLNLSVTPPY 488
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+H+PQ++ T+AEV ELMMVP+ IVSPQ NKPVM IVQDTLLGC L T RD
Sbjct: 489 NADFDGDEMNMHLPQSYETKAEVKELMMVPKMIVSPQANKPVMAIVQDTLLGCRLITKRD 548
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVR 514
TF+ +DV M++++ +E WDG IP PAI+KP+PLWTGKQ+FS++LP VNL+R
Sbjct: 549 TFIPKDVFMNIIMWLEDWDGKIPKPAILKPQPLWTGKQVFSMMLPKVNLLR 599
[50][TOP]
>UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U396_PHYPA
Length = 1742
Score = 263 bits (672), Expect = 6e-69
Identities = 123/179 (68%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRI++MPYSTFRLNLSVTSPY
Sbjct: 435 KKSSDRHLELGYKVERHMNDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPY 494
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PV+GIVQDTLLGC T RD
Sbjct: 495 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVIGIVQDTLLGCRKVTKRD 554
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV ++L+ E +DG IP P I+KP PLWTGKQ+FSL++P +NL+R HPD
Sbjct: 555 TFIEKDVFYNILMWWEEFDGKIPIPTILKPRPLWTGKQIFSLIIPKQINLMRQAFWHPD 613
[51][TOP]
>UniRef100_Q71ET9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pinus nigra
RepID=Q71ET9_9CONI
Length = 1013
Score = 262 bits (670), Expect = 1e-68
Identities = 122/179 (68%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 354 KKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 413
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 414 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 473
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG IP P I KP P+WTGKQ+F+L++P +NL+R H +
Sbjct: 474 TFIEKDVFMNILMWWEDFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQINLIRTSAWHSE 532
[52][TOP]
>UniRef100_Q9C428 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharis
macrandra RepID=Q9C428_9FUNG
Length = 1603
Score = 262 bits (670), Expect = 1e-68
Identities = 120/172 (69%), Positives = 146/172 (84%)
Frame = +2
Query: 23 LEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFDGD 202
L IG +V RH+ +GD+I+FNRQPSLHKMS+MGH+++VMP+STFRLNLSVTSPYNADFDGD
Sbjct: 362 LNIGDRVERHLVDGDYIIFNRQPSLHKMSMMGHKVRVMPFSTFRLNLSVTSPYNADFDGD 421
Query: 203 EMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRRDV 382
EMNLH PQ++ TRAE+ME+M VPR I+SP+ N+PVMGIVQDTL G FT RD FL RD+
Sbjct: 422 EMNLHAPQSYETRAEIMEIMRVPRQIISPKHNQPVMGIVQDTLCGIRKFTIRDNFLSRDM 481
Query: 383 TMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDD 538
M++L+ VE WDGVIP PAI+KP PLWTGKQ+ SL +PD+NLV + THPDD
Sbjct: 482 VMNILMWVEDWDGVIPLPAIVKPVPLWTGKQMMSLAIPDINLVGFSATHPDD 533
[53][TOP]
>UniRef100_Q8MX26 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cercomonas sp. ATCC
50319 RepID=Q8MX26_9EUKA
Length = 1014
Score = 262 bits (669), Expect = 1e-68
Identities = 118/178 (66%), Positives = 147/178 (82%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GY++ RHI +GD I+FNRQPSLHKMSIM H+I+VMP+STFRLNLS T+PY
Sbjct: 349 KKSSDQHLEVGYRIERHIHDGDVILFNRQPSLHKMSIMAHKIRVMPWSTFRLNLSCTTPY 408
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAE +E+M+ PR IVSPQ NKPV+GIVQDTLLGCM FTYRD
Sbjct: 409 NADFDGDEMNLHVPQSMMTRAEALEIMLCPRQIVSPQANKPVIGIVQDTLLGCMKFTYRD 468
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPD 535
FL + + ++L+H+E WDG +P P I+KP PLW+GKQ+FSL++P VN+ R N HPD
Sbjct: 469 NFLDKAMVFNILMHLENWDGTVPIPCILKPVPLWSGKQIFSLIIPRVNMERKANGHPD 526
[54][TOP]
>UniRef100_B7SNW6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Beta vulgaris
RepID=B7SNW6_BETVU
Length = 1012
Score = 261 bits (666), Expect = 3e-68
Identities = 122/179 (68%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 353 KKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 412
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ T AEV ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RD
Sbjct: 413 NADFDGDEMNMHVPQSFETXAEVXELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRD 472
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ E +DG IP P I+KP PLWTGKQ+F+L++P +NL+R H +
Sbjct: 473 TFIEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLIRTSAWHSE 531
[55][TOP]
>UniRef100_Q71ET8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Welwitschia
mirabilis RepID=Q71ET8_WELMI
Length = 1013
Score = 260 bits (665), Expect = 4e-68
Identities = 122/177 (68%), Positives = 148/177 (83%), Gaps = 1/177 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GD ++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPY
Sbjct: 354 KRSSDHHLELGYKVERHLNDGDLVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPY 413
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEVMELMMVP+CIVSPQ N+PVMGIVQDTLLGC T D
Sbjct: 414 NADFDGDEMNMHVPQSFETRAEVMELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKVTKGD 473
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTH 529
TF +DV M++L+ E ++G IP PAI+KP P+WTGKQ+F+L++P +NL+RY H
Sbjct: 474 TFTEKDVFMNILMWWEEFEGKIPNPAILKPRPIWTGKQVFNLIIPKQINLIRYSAWH 530
[56][TOP]
>UniRef100_A1YIC4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Chytriomyces
hyalinus RepID=A1YIC4_9FUNG
Length = 1003
Score = 260 bits (665), Expect = 4e-68
Identities = 120/175 (68%), Positives = 142/175 (81%)
Frame = +2
Query: 14 DVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADF 193
D+ L+ GYKV RH+ + D I+FNRQPSLHKMS+MGHR+KVMPYSTFRLNLSVT+PYNADF
Sbjct: 343 DIHLQTGYKVERHLVDDDLIIFNRQPSLHKMSMMGHRVKVMPYSTFRLNLSVTTPYNADF 402
Query: 194 DGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLR 373
DGDEMN+HVPQTH TRAEV EL MVPR IVSPQ N P MGIVQD+L G FT RD FL
Sbjct: 403 DGDEMNMHVPQTHETRAEVQELCMVPRQIVSPQKNAPCMGIVQDSLCGVRKFTKRDNFLP 462
Query: 374 RDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDD 538
+D M++L+ V WDGV+P PAI+KP PLWTGKQ+ SL++P +NL + + HPDD
Sbjct: 463 KDFVMNILMWVPDWDGVVPTPAIVKPVPLWTGKQMMSLIIPKINLENFHSQHPDD 517
[57][TOP]
>UniRef100_Q2PYT1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coelomomyces
stegomyiae RepID=Q2PYT1_9FUNG
Length = 542
Score = 260 bits (664), Expect = 5e-68
Identities = 120/178 (67%), Positives = 145/178 (81%)
Frame = +2
Query: 5 NRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYN 184
N+ D+ L+ G+ V RHI +GD I+FNRQPSLHKMS+MGH++KVMPYSTFRLNLSVTSPYN
Sbjct: 156 NKGDLNLQYGWIVERHINDGDIIIFNRQPSLHKMSMMGHKVKVMPYSTFRLNLSVTSPYN 215
Query: 185 ADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDT 364
ADFDGDEMNLHVPQ+ +AE+ +L MVP IVSPQGNKPVMGIVQDTL G FT RDT
Sbjct: 216 ADFDGDEMNLHVPQSVEAKAEIQQLCMVPLQIVSPQGNKPVMGIVQDTLCGIRKFTQRDT 275
Query: 365 FLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDD 538
FL + M +L+ V GWDG +P PAI+KP+PLWTGKQ+ SL++P VN + + +THPDD
Sbjct: 276 FLTKSTVMCILMWVPGWDGNVPIPAILKPKPLWTGKQILSLIIPKVNCIAFHSTHPDD 333
[58][TOP]
>UniRef100_Q2PYS3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cladochytrium
replicatum RepID=Q2PYS3_9FUNG
Length = 981
Score = 260 bits (664), Expect = 5e-68
Identities = 120/177 (67%), Positives = 145/177 (81%)
Frame = +2
Query: 5 NRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYN 184
NR++V L++GY+V RH+ + DF++FNRQPSLHKM +MGHR+KVMP+STFRLNLSVTSPYN
Sbjct: 325 NRSEVSLQVGYRVERHLMDDDFVIFNRQPSLHKMGMMGHRVKVMPFSTFRLNLSVTSPYN 384
Query: 185 ADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDT 364
ADFDGDEMNLHVPQ+H TRAE+MEL MVPR IVSPQ N PVMGIVQDTL G T RD
Sbjct: 385 ADFDGDEMNLHVPQSHETRAEIMELCMVPRQIVSPQKNAPVMGIVQDTLCGIRKLTRRDC 444
Query: 365 FLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPD 535
FL D+ ++L+ V WDGV+P PAI+KP PLWTGKQ SL+LP VN++ + + HPD
Sbjct: 445 FLTMDLMKNILMWVPNWDGVVPMPAILKPVPLWTGKQAISLVLPKVNMIGFHSQHPD 501
[59][TOP]
>UniRef100_A1YIC2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coelomomyces
stegomyiae RepID=A1YIC2_9FUNG
Length = 1014
Score = 260 bits (664), Expect = 5e-68
Identities = 120/178 (67%), Positives = 145/178 (81%)
Frame = +2
Query: 5 NRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYN 184
N+ D+ L+ G+ V RHI +GD I+FNRQPSLHKMS+MGH++KVMPYSTFRLNLSVTSPYN
Sbjct: 350 NKGDLNLQYGWIVERHINDGDIIIFNRQPSLHKMSMMGHKVKVMPYSTFRLNLSVTSPYN 409
Query: 185 ADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDT 364
ADFDGDEMNLHVPQ+ +AE+ +L MVP IVSPQGNKPVMGIVQDTL G FT RDT
Sbjct: 410 ADFDGDEMNLHVPQSVEAKAEIQQLCMVPLQIVSPQGNKPVMGIVQDTLCGIRKFTQRDT 469
Query: 365 FLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDD 538
FL + M +L+ V GWDG +P PAI+KP+PLWTGKQ+ SL++P VN + + +THPDD
Sbjct: 470 FLTKSTVMCILMWVPGWDGNVPIPAILKPKPLWTGKQILSLIIPKVNCIAFHSTHPDD 527
[60][TOP]
>UniRef100_C1EA31 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1EA31_9CHLO
Length = 1720
Score = 259 bits (662), Expect = 8e-68
Identities = 118/171 (69%), Positives = 143/171 (83%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D +LE GYKV RH+ NGD ++FNRQPSLHKMSIMGHR+++MPYSTFR+N+SVT PY
Sbjct: 410 KRESDKRLEYGYKVERHMINGDCVLFNRQPSLHKMSIMGHRVRIMPYSTFRMNISVTPPY 469
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+H+PQ+ TRAEV ELMMVP+ IVSPQ NKPVM IVQDTLL C L T RD
Sbjct: 470 NADFDGDEMNMHLPQSMETRAEVQELMMVPKMIVSPQANKPVMAIVQDTLLACRLITKRD 529
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVR 514
TF+ +DV M++L+ WDG +P PAIIKPEPLWTGKQ+FS+ PDVN++R
Sbjct: 530 TFITKDVFMNILMWHTNWDGKVPKPAIIKPEPLWTGKQVFSMFTPDVNVIR 580
[61][TOP]
>UniRef100_Q2PYS7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Batrachochytrium
dendrobatidis RepID=Q2PYS7_BATDE
Length = 985
Score = 259 bits (662), Expect = 8e-68
Identities = 120/175 (68%), Positives = 144/175 (82%)
Frame = +2
Query: 14 DVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADF 193
D+ L+ GYKV RH+ + D+I+FNRQPSLHKMS+MGHR+K+MPYSTFRLNLSVTSPYNADF
Sbjct: 337 DIHLQYGYKVERHLLDNDYIIFNRQPSLHKMSMMGHRVKIMPYSTFRLNLSVTSPYNADF 396
Query: 194 DGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLR 373
DGDEMN+HVPQ+H TRAE+ L MVP IVSPQ N PVMGIVQDTL G F+ RDTFL+
Sbjct: 397 DGDEMNMHVPQSHETRAEIQGLCMVPLQIVSPQKNAPVMGIVQDTLCGIRKFSKRDTFLK 456
Query: 374 RDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDD 538
RD+ M+LL+ V WDG+IP PAI+KP PLWT KQ+ SL+LP +NLV + HPD+
Sbjct: 457 RDLMMNLLMWVPDWDGIIPTPAILKPIPLWTAKQIISLILPKINLVGFHAAHPDN 511
[62][TOP]
>UniRef100_A9TK89 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TK89_PHYPA
Length = 1646
Score = 258 bits (660), Expect = 1e-67
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D LE+GYKV RH+ +GDF++FNRQPSLHKMSIMGHRI++MPYSTFRLNLSVTSPY
Sbjct: 435 KRSSDRHLELGYKVERHMNDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPY 494
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAEV+ELMMVP+C+VSPQ N+PV+GIVQDTLLGC T RD
Sbjct: 495 NADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVIGIVQDTLLGCRKVTKRD 554
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV ++L+ E + G IP P I+KP PLWTGKQ+F+L++P +NL+R HPD
Sbjct: 555 TFIEKDVFYNILMWWEEFAGKIPIPTILKPRPLWTGKQIFTLIIPKQINLMRQAFWHPD 613
[63][TOP]
>UniRef100_Q2PYT0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Physoderma maydis
RepID=Q2PYT0_9FUNG
Length = 748
Score = 257 bits (656), Expect = 4e-67
Identities = 121/180 (67%), Positives = 147/180 (81%), Gaps = 1/180 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
RN++D+ L+ G+ V RH+ +GD I+FNRQPSLHKMS+MGHRI+VMPYSTFRLNLSVTSPY
Sbjct: 348 RNKSDLTLQHGWIVERHVNDGDLIIFNRQPSLHKMSMMGHRIRVMPYSTFRLNLSVTSPY 407
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ RAEV E+ MVP+ IVSPQ NKP MGIVQDTL G FT RD
Sbjct: 408 NADFDGDEMNMHVPQSMEARAEVQEICMVPKQIVSPQANKPCMGIVQDTLCGIRKFTKRD 467
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPD-VNLVRYCNTHPDD 538
TFL + + M++LL V WDGVIPPPAI KP+PLWTGKQ+ SL++P N + + +THPD+
Sbjct: 468 TFLSKSLVMNILLWVPNWDGVIPPPAIFKPKPLWTGKQILSLIIPPRTNCITHHSTHPDN 527
[64][TOP]
>UniRef100_A1YIB2 DNA-directed RNA polymerase (Fragment) n=2 Tax=Smittium culisetae
RepID=A1YIB2_SMICU
Length = 1025
Score = 257 bits (656), Expect = 4e-67
Identities = 118/175 (67%), Positives = 145/175 (82%), Gaps = 1/175 (0%)
Frame = +2
Query: 14 DVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADF 193
D+ L+IGYKV R + + D ++FNRQPSLHKMS+MGHR+KVM YSTFRLNLSVTSPYNADF
Sbjct: 363 DIPLQIGYKVERSLMDNDVVIFNRQPSLHKMSMMGHRVKVMDYSTFRLNLSVTSPYNADF 422
Query: 194 DGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLR 373
DGDEMNLH+PQ+ TRAEV EL MVP+ IVSPQGN+P+MGIVQDTL ++FT RD ++
Sbjct: 423 DGDEMNLHLPQSEETRAEVRELCMVPKQIVSPQGNRPIMGIVQDTLCAMIMFTKRDNLMK 482
Query: 374 RDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPD-VNLVRYCNTHPD 535
+D+ M LLL V GWDG+IPPP I+KP+PLW+GKQL+SLL+PD +N + HPD
Sbjct: 483 QDLVMDLLLKVPGWDGMIPPPCILKPQPLWSGKQLYSLLIPDGINCYTFLKEHPD 537
[65][TOP]
>UniRef100_C1MI48 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MI48_9CHLO
Length = 1694
Score = 256 bits (653), Expect = 9e-67
Identities = 115/171 (67%), Positives = 145/171 (84%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D +LE GY+V RH+ NGD ++FNRQPSLHKMSIMGHR+++MPYSTFR+N+SVT PY
Sbjct: 413 KKESDKRLEYGYRVERHMINGDCVLFNRQPSLHKMSIMGHRVRIMPYSTFRMNISVTPPY 472
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+H+PQ+ TRAEV ELMMVP+ IVSPQ NKPVM IVQDTLL L T RD
Sbjct: 473 NADFDGDEMNMHLPQSLETRAEVQELMMVPKMIVSPQANKPVMAIVQDTLLASRLMTKRD 532
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVR 514
TF+++DV M++L+ +E WDG +P PAI+KPEPLWTGKQ+F++ LPDV+L +
Sbjct: 533 TFIKKDVFMNILMWLENWDGKVPKPAILKPEPLWTGKQVFTMFLPDVSLTK 583
[66][TOP]
>UniRef100_Q2PYR1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spiromyces aspiralis
RepID=Q2PYR1_9FUNG
Length = 1022
Score = 256 bits (653), Expect = 9e-67
Identities = 114/176 (64%), Positives = 146/176 (82%), Gaps = 1/176 (0%)
Frame = +2
Query: 14 DVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADF 193
D+ L IGY+V RHI +GD ++FNRQPSLHKMS+MGHR++V+PYSTFRLNLSVTSPYNADF
Sbjct: 365 DIPLAIGYRVERHIMDGDVVIFNRQPSLHKMSMMGHRVRVLPYSTFRLNLSVTSPYNADF 424
Query: 194 DGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLR 373
DGDEMN+HVPQ+ +RAE+ E+ MVPR I+SPQ N PVMGIVQDTL FT RD F+
Sbjct: 425 DGDEMNMHVPQSEESRAEIKEICMVPRQIISPQANSPVMGIVQDTLCAIRKFTRRDNFMA 484
Query: 374 RDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
+D+ M++L+H+ WDG +P PAIIKP+PLWTGKQ++SL +P +N +R+ +THPD+
Sbjct: 485 KDLVMNILMHIPDWDGTVPTPAIIKPKPLWTGKQIYSLAIPKGINCLRFHSTHPDN 540
[67][TOP]
>UniRef100_A1YIB3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Capniomyces
stellatus RepID=A1YIB3_9FUNG
Length = 1024
Score = 256 bits (653), Expect = 9e-67
Identities = 118/176 (67%), Positives = 146/176 (82%), Gaps = 1/176 (0%)
Frame = +2
Query: 14 DVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADF 193
D+ L+IGY+V R++ + D ++FNRQPSLHKMS+MGHR+KVMPYSTFRLNLSVTSPYNADF
Sbjct: 362 DIPLQIGYRVERNLMDDDVVIFNRQPSLHKMSMMGHRVKVMPYSTFRLNLSVTSPYNADF 421
Query: 194 DGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLR 373
DGDEMNLH+PQ+ TRAE+ EL MVP+ IVSPQ NKPVMGIVQDTL ++FT RDT +R
Sbjct: 422 DGDEMNLHLPQSEETRAEIRELCMVPKQIVSPQANKPVMGIVQDTLCALLMFTKRDTLMR 481
Query: 374 RDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
D+ MSLLL V GWDG+IP P I+KP+PLW+GKQ+FSL++P +N + HPD+
Sbjct: 482 LDMVMSLLLKVPGWDGLIPTPCILKPQPLWSGKQIFSLIIPKGINCYTFFKDHPDN 537
[68][TOP]
>UniRef100_Q2PYR5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mortierella
verticillata RepID=Q2PYR5_9FUNG
Length = 1016
Score = 255 bits (652), Expect = 1e-66
Identities = 117/179 (65%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Frame = +2
Query: 5 NRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYN 184
N+ +V L++G+KV RHI +GD ++FNRQPSLHKMS+MGH+I+VMPYSTFRLNLSVTSPYN
Sbjct: 347 NKREVPLQLGWKVERHINDGDVVIFNRQPSLHKMSMMGHKIRVMPYSTFRLNLSVTSPYN 406
Query: 185 ADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDT 364
ADFDGDEMNLHVPQ+ TRAE+ E+ MVPR IVSPQ NKPVMGIVQDTL G FT RD
Sbjct: 407 ADFDGDEMNLHVPQSVETRAEITEICMVPRQIVSPQSNKPVMGIVQDTLCGVRKFTKRDC 466
Query: 365 FLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
FL +++ M+L++ V GW+G +P PAI+KP+PLWTG+Q+ S+++P +N + Y +THPD+
Sbjct: 467 FLTKEMVMNLVMWVPGWEGFLPTPAILKPKPLWTGRQMLSMIIPKGINCICYHSTHPDN 525
[69][TOP]
>UniRef100_Q2PYS2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dimargaris
bacillispora RepID=Q2PYS2_9FUNG
Length = 753
Score = 254 bits (650), Expect = 2e-66
Identities = 114/176 (64%), Positives = 146/176 (82%), Gaps = 1/176 (0%)
Frame = +2
Query: 14 DVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADF 193
++ L+ G++V RH+ +GD ++FNRQPSLHKMS+MGH+++VMPYSTFRLNLSVTSPYNADF
Sbjct: 357 EIPLQYGWRVERHLVSGDLVIFNRQPSLHKMSMMGHKVRVMPYSTFRLNLSVTSPYNADF 416
Query: 194 DGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLR 373
DGDEMN+HVPQ+ TRAE+ E+ MVP+ IVSPQ NKPVMGIVQDTL FT RDTFL
Sbjct: 417 DGDEMNMHVPQSEETRAEIREICMVPKNIVSPQANKPVMGIVQDTLCAVRRFTKRDTFLT 476
Query: 374 RDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPD-VNLVRYCNTHPDD 538
+D+ M+L+L + WDG IP P I+KP+PLWTGKQ+FS+++P +N +RY + HPDD
Sbjct: 477 KDMVMNLMLWLPNWDGQIPQPCILKPKPLWTGKQIFSMIIPSGINCIRYHSLHPDD 532
[70][TOP]
>UniRef100_Q2PYS1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum
RepID=Q2PYS1_9FUNG
Length = 1015
Score = 254 bits (649), Expect = 3e-66
Identities = 114/180 (63%), Positives = 147/180 (81%), Gaps = 1/180 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ D+ L+ GYKV RH+ NGD ++FNRQPSLHKMS+MGH+++VMPYSTFRLNLSVTSPY
Sbjct: 354 KRAGDIPLQYGYKVERHLNNGDVVIFNRQPSLHKMSMMGHKVRVMPYSTFRLNLSVTSPY 413
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ T+AE+ E+ MVP+ I+SPQ NKPVMGIVQDTL G FT RD
Sbjct: 414 NADFDGDEMNMHVPQSEETKAEIKEICMVPKQIISPQSNKPVMGIVQDTLCGIRKFTKRD 473
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
F+ + + M++L+ V WDGVIP PAI+KP+PLWTGKQL ++++P ++N + Y + HPDD
Sbjct: 474 CFVDKALVMNILMWVADWDGVIPTPAILKPQPLWTGKQLVTMIVPKNINCITYHSAHPDD 533
[71][TOP]
>UniRef100_O02452 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mastigoproctus
giganteus RepID=O02452_MASGI
Length = 887
Score = 253 bits (647), Expect = 5e-66
Identities = 118/177 (66%), Positives = 147/177 (83%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ NGD ++FNRQP+LHKMS+MGH+I+V+P+STFRLNLSVT+PYNAD
Sbjct: 75 SDLHLQCGYKVERHVKNGDVVIFNRQPTLHKMSMMGHKIRVLPWSTFRLNLSVTTPYNAD 134
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV EL +VPR I++PQ NKPVMGIVQDTL T RD FL
Sbjct: 135 FDGDEMNLHVPQSLETRAEVQELALVPRQIITPQSNKPVMGIVQDTLTAVRKMTKRDVFL 194
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPD-VNLVRYCNTHPDD 538
+D M+LL+ + WDG +P PA++KP+PLWTGKQLFSL++PD VNL+R +THPDD
Sbjct: 195 EKDQMMNLLMFLPIWDGKMPMPAVLKPKPLWTGKQLFSLIIPDNVNLIRTHSTHPDD 251
[72][TOP]
>UniRef100_Q2PYQ3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phycomyces
blakesleeanus RepID=Q2PYQ3_PHYBL
Length = 564
Score = 253 bits (647), Expect = 5e-66
Identities = 119/180 (66%), Positives = 148/180 (82%), Gaps = 2/180 (1%)
Frame = +2
Query: 2 RNRA-DVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSP 178
R RA ++ L+ GY+V RHI +GD ++FNRQPSLHKMS+MGHR++VMPYSTFRLNLSVTSP
Sbjct: 183 RKRAGEIPLQYGYRVERHINDGDVVIFNRQPSLHKMSMMGHRVRVMPYSTFRLNLSVTSP 242
Query: 179 YNADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYR 358
YNADFDGDEMNLHVPQ+ TRAEV E+ MVP+ IVSPQ NKPVMGIVQDTL G FT R
Sbjct: 243 YNADFDGDEMNLHVPQSLETRAEVTEICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTLR 302
Query: 359 DTFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
D F+ +DV M++++ V WDG IPPPAI+KP+P+WTGKQ+ S+++P +N + +THPD
Sbjct: 303 DCFITKDVVMNIVMWVPDWDGYIPPPAILKPKPMWTGKQIVSMVIPRGINCQTFHSTHPD 362
[73][TOP]
>UniRef100_Q30BD8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cyanophora paradoxa
RepID=Q30BD8_CYAPA
Length = 1000
Score = 253 bits (645), Expect = 8e-66
Identities = 120/180 (66%), Positives = 147/180 (81%), Gaps = 2/180 (1%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
R +D+ LE GY+V RHI +GD+++FNRQPSLHKMSIM HRIKVMPYSTFRLNLSVTSPY
Sbjct: 333 RKASDLHLEPGYRVERHIQDGDYVLFNRQPSLHKMSIMAHRIKVMPYSTFRLNLSVTSPY 392
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAE E++ VPR IVSPQ N+PVMGIVQDTL+ T RD
Sbjct: 393 NADFDGDEMNLHVPQSFETRAEASEIIAVPRQIVSPQSNRPVMGIVQDTLMASQKMTLRD 452
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPE--PLWTGKQLFSLLLPDVNLVRYCNTHPD 535
TF+ +DV M++++H++ +DG +P PAI+K P WTGKQLFS LP+VN+VR+ +THPD
Sbjct: 453 TFIEKDVIMNIVMHLDSFDGRLPIPAIVKSPKGPRWTGKQLFSTFLPNVNVVRFHSTHPD 512
[74][TOP]
>UniRef100_Q9NJK6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cypridopsis vidua
RepID=Q9NJK6_9CRUS
Length = 624
Score = 252 bits (644), Expect = 1e-65
Identities = 115/177 (64%), Positives = 145/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ LE+GYKV RH+ +GD ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 75 SDLHLEVGYKVERHVRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 134
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMN+HVPQ+ TRAE+ L + PR +++PQ NKPVMGIVQDTL T RD FL
Sbjct: 135 FDGDEMNMHVPQSMETRAEIENLHLTPRMVITPQANKPVMGIVQDTLCAVRKMTKRDVFL 194
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
+D M LL+H+ WDG +P PAI+KP+PLWTGKQLFSL++P +VNLVR +THPDD
Sbjct: 195 EKDQIMDLLMHLPRWDGRMPVPAILKPKPLWTGKQLFSLIIPGNVNLVRTHSTHPDD 251
[75][TOP]
>UniRef100_O00820 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acanthamoeba
castellanii RepID=O00820_ACACA
Length = 1569
Score = 252 bits (644), Expect = 1e-65
Identities = 118/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
R +D+ LE GYKV RHI +GD I+FNRQPSLHKMS+MGH++K+MPYSTFRLNLSVT+PY
Sbjct: 348 RKASDLHLEYGYKVERHIQDGDVIIFNRQPSLHKMSMMGHKVKIMPYSTFRLNLSVTTPY 407
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQT RAEV+ELMMVP+ IV+ Q NKPV+GIVQDTLLG L T RD
Sbjct: 408 NADFDGDEMNMHVPQTPGARAEVIELMMVPKQIVTAQSNKPVIGIVQDTLLGGCLLTQRD 467
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
TF+ +DV M++L+ +E WDG +P P I+KP+ LWTGKQ+FSL++P + N V + PD
Sbjct: 468 TFIEKDVMMNILMWLESWDGTVPTPTILKPKQLWTGKQVFSLIIPRNTNFVNADDEEPD 526
[76][TOP]
>UniRef100_Q2PYS6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Polychytrium
aggregatum RepID=Q2PYS6_9FUNG
Length = 1016
Score = 252 bits (644), Expect = 1e-65
Identities = 117/175 (66%), Positives = 140/175 (80%)
Frame = +2
Query: 14 DVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADF 193
D+ L+ GYKV RH+ + D ++FNRQPSLHKMS+MGHR+KVMPYSTFRLNLSVTSPYNADF
Sbjct: 360 DIHLQPGYKVERHLMDDDVVIFNRQPSLHKMSMMGHRVKVMPYSTFRLNLSVTSPYNADF 419
Query: 194 DGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLR 373
DGDEMNLHVPQ++ TRAE+ EL MVP+ IV+PQ N P MGIVQDTL FT RD FL
Sbjct: 420 DGDEMNLHVPQSYETRAEIQELCMVPKQIVTPQKNGPCMGIVQDTLCAIRKFTRRDCFLS 479
Query: 374 RDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDD 538
+D+ M+LL+ V WDG +P P IIKP PLWTGKQ+ SL++P +N+V Y HPDD
Sbjct: 480 KDMVMNLLMWVPDWDGTVPTPCIIKPIPLWTGKQMMSLIIPRINMVGYHMAHPDD 534
[77][TOP]
>UniRef100_B6JYP8 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JYP8_SCHJY
Length = 1748
Score = 252 bits (644), Expect = 1e-65
Identities = 117/172 (68%), Positives = 141/172 (81%), Gaps = 1/172 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ D+ L G++V RHI +GD ++FNRQPSLHKMS+MGHRI+VMPYSTFRLNLSVTSPY
Sbjct: 425 KRAGDIPLRYGWRVERHIRDGDVVIFNRQPSLHKMSMMGHRIRVMPYSTFRLNLSVTSPY 484
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAE+ E+ MVPR IVSPQ NKPVMGIVQDTL G F+ RD
Sbjct: 485 NADFDGDEMNMHVPQSEETRAEIQEIAMVPRQIVSPQSNKPVMGIVQDTLAGVRKFSLRD 544
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVR 514
FL RDV M+++L V WDGV+PPP I+KP+PLWTGKQ+ SL++P +NL R
Sbjct: 545 NFLSRDVVMNIMLWVPNWDGVVPPPVILKPKPLWTGKQILSLVIPKGINLTR 596
[78][TOP]
>UniRef100_A1YIB6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum
RepID=A1YIB6_9FUNG
Length = 1018
Score = 252 bits (644), Expect = 1e-65
Identities = 113/180 (62%), Positives = 147/180 (81%), Gaps = 1/180 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ D+ L+ GYKV RH+ +GD ++FNRQPSLHKMS+MGH+++VMPYSTFRLNLSVTSPY
Sbjct: 352 KRAGDIPLQYGYKVERHLNDGDVVIFNRQPSLHKMSMMGHKVRVMPYSTFRLNLSVTSPY 411
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ T AE+ E+ MVP+ I+SPQ NKPVMGIVQDTL G FT RD
Sbjct: 412 NADFDGDEMNMHVPQSEETNAEIKEICMVPKQIISPQSNKPVMGIVQDTLCGIRKFTKRD 471
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
+F+ + + M++L+ V WDGVIP PAI+KP+PLWTGKQL ++++P ++N + Y + HPDD
Sbjct: 472 SFVDKALVMNILMWVADWDGVIPTPAILKPQPLWTGKQLVTMIVPKNINCITYHSAHPDD 531
[79][TOP]
>UniRef100_A1YIB9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces macrogynus
RepID=A1YIB9_ALLMA
Length = 1008
Score = 251 bits (641), Expect = 2e-65
Identities = 114/177 (64%), Positives = 146/177 (82%)
Frame = +2
Query: 8 RADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNA 187
+ ++ L+ G+ V RH+ +GD I+FNRQPSLHKMS+MGH++KVMPYSTFRLNLSVTSPYNA
Sbjct: 345 KGNLGLQYGWIVERHLDDGDVIIFNRQPSLHKMSMMGHKVKVMPYSTFRLNLSVTSPYNA 404
Query: 188 DFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTF 367
DFDGDEMN+HVPQ+ +AE+ +L MVP I+SPQ NKPVMGIVQDTL G FT RDTF
Sbjct: 405 DFDGDEMNMHVPQSLEAKAEIQQLCMVPLQIISPQSNKPVMGIVQDTLCGITKFTRRDTF 464
Query: 368 LRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDD 538
+ +++ M+LL+ V WDG +PPPAI+KP+PLWTGKQ+ SL++P VN + + +THPDD
Sbjct: 465 MDKNMVMNLLMWVPNWDGNVPPPAIMKPKPLWTGKQILSLVIPKVNCITHHSTHPDD 521
[80][TOP]
>UniRef100_A1YIB5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mucor hiemalis
RepID=A1YIB5_9FUNG
Length = 1009
Score = 251 bits (641), Expect = 2e-65
Identities = 118/180 (65%), Positives = 147/180 (81%), Gaps = 2/180 (1%)
Frame = +2
Query: 2 RNRA-DVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSP 178
R RA ++ L+ GY+V RHI + D ++FNRQPSLHKMS+MGHR+KVMPYSTFRLNLSVTSP
Sbjct: 344 RKRAGEIPLQYGYRVERHINDDDVVIFNRQPSLHKMSMMGHRVKVMPYSTFRLNLSVTSP 403
Query: 179 YNADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYR 358
YNADFDGDEMNLHVPQ+ TRAEV E+ MVP+ IVSPQ NKPVMGIVQDTL G FT R
Sbjct: 404 YNADFDGDEMNLHVPQSLETRAEVTEICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTLR 463
Query: 359 DTFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
D F+ +D+ M++++ V WDG IPPPAI+KP+P+WTGKQ+ S+++P +N + +THPD
Sbjct: 464 DCFMTKDLVMNIVMWVPSWDGYIPPPAILKPKPMWTGKQIVSMVIPKGINCQTFHSTHPD 523
[81][TOP]
>UniRef100_A1YIC0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Catenaria
anguillulae RepID=A1YIC0_9FUNG
Length = 1020
Score = 251 bits (640), Expect = 3e-65
Identities = 118/171 (69%), Positives = 141/171 (82%)
Frame = +2
Query: 23 LEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFDGD 202
L+ G+ V RH+ + D I+FNRQPSLHKMS+MGHR+KVMPYSTFRLNLSVTSPYNADFDGD
Sbjct: 362 LQPGWIVERHLMDDDVIIFNRQPSLHKMSMMGHRVKVMPYSTFRLNLSVTSPYNADFDGD 421
Query: 203 EMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRRDV 382
EMNLHVPQ+ RAE+ +L MVP IVSPQ NKPVMGIVQDTL G FT RDTF+ R +
Sbjct: 422 EMNLHVPQSVEARAEIQQLCMVPLQIVSPQSNKPVMGIVQDTLCGITKFTRRDTFMDRAM 481
Query: 383 TMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPD 535
M+LL+ V GWDG +PPPAI+KP+P+WTGKQ+ SL++P VN V + +THPD
Sbjct: 482 VMNLLMWVPGWDGNMPPPAIVKPKPMWTGKQIMSLIIPKVNAVTFHSTHPD 532
[82][TOP]
>UniRef100_Q2PYQ4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Orphella haysii
RepID=Q2PYQ4_9FUNG
Length = 750
Score = 250 bits (639), Expect = 4e-65
Identities = 114/176 (64%), Positives = 144/176 (81%), Gaps = 1/176 (0%)
Frame = +2
Query: 14 DVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADF 193
D+ L+IGY+V RH+ + D ++FNRQPSLHKMS+MGHR++VMP+STFRLNLSVTSPYNADF
Sbjct: 366 DIPLQIGYRVERHLVDNDVVIFNRQPSLHKMSMMGHRVRVMPFSTFRLNLSVTSPYNADF 425
Query: 194 DGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLR 373
DGDEMN+HVPQ+ TRAE+ E+ MVPR IVSPQ NKPVMGIVQDTL FT RD FL
Sbjct: 426 DGDEMNMHVPQSEETRAEIKEICMVPRQIVSPQSNKPVMGIVQDTLAAIRKFTKRDCFLE 485
Query: 374 RDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
D+ M+LL+ + WDG++PPP I+KP+ LWTGKQ++SL++P N R+ +THPD+
Sbjct: 486 ADLVMNLLMTLPEWDGIVPPPCIMKPKMLWTGKQIYSLVIPKGTNCYRFHSTHPDE 541
[83][TOP]
>UniRef100_UPI0000546D90 PREDICTED: im:7136071 isoform 1 n=1 Tax=Danio rerio
RepID=UPI0000546D90
Length = 1972
Score = 250 bits (638), Expect = 5e-65
Identities = 115/177 (64%), Positives = 145/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+IGYKV RH+ +GD IVFNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 433 SDLHLQIGYKVERHMCDGDIIVFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 492
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 493 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 552
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPD+
Sbjct: 553 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINAIRTHSTHPDE 609
[84][TOP]
>UniRef100_A1YIB4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Furculomyces
boomerangus RepID=A1YIB4_9FUNG
Length = 1024
Score = 250 bits (638), Expect = 5e-65
Identities = 115/176 (65%), Positives = 144/176 (81%), Gaps = 1/176 (0%)
Frame = +2
Query: 14 DVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADF 193
D+ L IGY+V RH+ + D ++FNRQPSLHKMS+MGHR+KVMPYSTFRLNLSVTSPYNADF
Sbjct: 362 DIPLRIGYRVERHMLDDDVVIFNRQPSLHKMSMMGHRVKVMPYSTFRLNLSVTSPYNADF 421
Query: 194 DGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLR 373
DGDEMNLH+PQ+ TRAEV E+ MVP+ IVSPQ N PVMGIVQDTL +FT RDT L+
Sbjct: 422 DGDEMNLHLPQSEETRAEVTEICMVPKQIVSPQSNMPVMGIVQDTLCAINIFTKRDTLLQ 481
Query: 374 RDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
D M+LL+ + WDG++P P I+KP+PLW+GKQ++S+++P VN RY +THPD+
Sbjct: 482 YDFVMNLLMTIPDWDGIVPTPCILKPQPLWSGKQIYSMVIPKGVNCHRYNSTHPDN 537
[85][TOP]
>UniRef100_B7PJA3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis
RepID=B7PJA3_IXOSC
Length = 1937
Score = 249 bits (636), Expect = 9e-65
Identities = 117/177 (66%), Positives = 147/177 (83%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GY+V RH+ NGD IVFNRQP+LHKMS+MGHRIKV+P+STFR+NLSVT+PYNAD
Sbjct: 436 SDLHLQCGYRVERHVRNGDIIVFNRQPTLHKMSMMGHRIKVLPWSTFRMNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV +L MVPR I++PQ NKPVMGIVQDTL T RD FL
Sbjct: 496 FDGDEMNLHVPQSLETRAEVEQLAMVPRQIITPQSNKPVMGIVQDTLTAVRKMTKRDIFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
+D M++L+ + WDG +P PAI+KP+PLWTGKQ+FSL++P +VNL+R +THPD+
Sbjct: 556 EKDQMMTILMFLPIWDGKMPMPAILKPKPLWTGKQIFSLIIPGNVNLIRTHSTHPDE 612
[86][TOP]
>UniRef100_UPI0001796DD3 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase II subunit A) (DNA-directed RNA polymerase
III largest subunit) n=1 Tax=Equus caballus
RepID=UPI0001796DD3
Length = 1834
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 612
[87][TOP]
>UniRef100_UPI0000EBDCD2 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
isoform 4 n=1 Tax=Bos taurus RepID=UPI0000EBDCD2
Length = 1970
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 612
[88][TOP]
>UniRef100_UPI0000E24648 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) n=1 Tax=Pan troglodytes
RepID=UPI0000E24648
Length = 1913
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 612
[89][TOP]
>UniRef100_UPI0000D9E16B PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) n=1 Tax=Macaca mulatta
RepID=UPI0000D9E16B
Length = 1193
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 612
[90][TOP]
>UniRef100_UPI00005A0B2C PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 23 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2C
Length = 1888
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 612
[91][TOP]
>UniRef100_UPI00005A0B2B PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 22 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2B
Length = 1892
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 438 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 497
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 498 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 557
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 558 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 614
[92][TOP]
>UniRef100_UPI00005A0B2A PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 21 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2A
Length = 1896
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 438 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 497
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 498 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 557
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 558 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 614
[93][TOP]
>UniRef100_UPI00005A0B29 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 20 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B29
Length = 1891
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 405 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 464
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 465 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 524
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 525 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 581
[94][TOP]
>UniRef100_UPI00005A0B28 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 19 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B28
Length = 1908
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 422 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 481
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 482 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 541
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 542 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 598
[95][TOP]
>UniRef100_UPI00005A0B27 PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide A isoform 18 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B27
Length = 1831
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 612
[96][TOP]
>UniRef100_UPI00005A0B26 PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide A isoform 17 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B26
Length = 1684
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 426 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 485
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 486 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 545
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 546 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 602
[97][TOP]
>UniRef100_UPI00005A0B25 PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide A isoform 16 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B25
Length = 1752
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 426 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 485
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 486 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 545
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 546 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 602
[98][TOP]
>UniRef100_UPI00005A0B24 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 15 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B24
Length = 1924
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 438 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 497
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 498 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 557
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 558 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 614
[99][TOP]
>UniRef100_UPI00005A0B23 PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide A isoform 14 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B23
Length = 1653
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 409 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 468
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 469 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 528
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 529 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 585
[100][TOP]
>UniRef100_UPI00005A0B22 PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide A isoform 13 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B22
Length = 1722
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 409 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 468
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 469 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 528
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 529 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 585
[101][TOP]
>UniRef100_UPI00005A0B1D PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 1 n=2 Tax=Canis lupus familiaris
RepID=UPI00005A0B1D
Length = 1764
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 612
[102][TOP]
>UniRef100_UPI00005A0B1C PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide A isoform 8 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1C
Length = 1719
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 612
[103][TOP]
>UniRef100_UPI00005A0B1B PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide A isoform 7 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1B
Length = 1858
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 612
[104][TOP]
>UniRef100_UPI00005A0B1A PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 6 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1A
Length = 1767
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 422 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 481
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 482 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 541
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 542 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 598
[105][TOP]
>UniRef100_UPI00005A0B19 PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide A isoform 5 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B19
Length = 1693
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 612
[106][TOP]
>UniRef100_UPI00005A0B17 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 3 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B17
Length = 1788
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 612
[107][TOP]
>UniRef100_UPI00005A0B16 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 2 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B16
Length = 1922
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 612
[108][TOP]
>UniRef100_UPI0001B7A25B UPI0001B7A25B related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25B
Length = 1932
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 612
[109][TOP]
>UniRef100_UPI0000DA33D8 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) n=1 Tax=Rattus norvegicus
RepID=UPI0000DA33D8
Length = 1970
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 612
[110][TOP]
>UniRef100_UPI0001951285 220 kDa DNA-directed RNA polymerase polypeptide A n=1 Tax=Canis
lupus familiaris RepID=UPI0001951285
Length = 1969
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 612
[111][TOP]
>UniRef100_O35559 DNA-directed RNA polymerase n=1 Tax=Cricetulus griseus
RepID=O35559_CRIGR
Length = 1970
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 612
[112][TOP]
>UniRef100_O08847 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=O08847_MOUSE
Length = 1966
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 612
[113][TOP]
>UniRef100_A6NN93 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=A6NN93_HUMAN
Length = 1970
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 612
[114][TOP]
>UniRef100_Q2PYR3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhizophlyctis rosea
RepID=Q2PYR3_9FUNG
Length = 1006
Score = 249 bits (635), Expect = 1e-64
Identities = 119/173 (68%), Positives = 142/173 (82%)
Frame = +2
Query: 17 VQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFD 196
V L+IG KV RH+ + D I+FNRQPSLHKMS+MGHR+KVMPYSTFRLNLSVTSPYNADFD
Sbjct: 349 VILKIGDKVERHLMDDDLIIFNRQPSLHKMSMMGHRVKVMPYSTFRLNLSVTSPYNADFD 408
Query: 197 GDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRR 376
GDEMNLHVPQ++ T+AE+ EL +VPR IVSPQ N PVMGIVQDTL G +FT RDTFLR+
Sbjct: 409 GDEMNLHVPQSYQTKAEIQELCVVPRQIVSPQKNGPVMGIVQDTLCGITMFTQRDTFLRK 468
Query: 377 DVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPD 535
D+ M++L+ V WDG IP PAI+KP PLWTGKQ+ SL++P +N+ HPD
Sbjct: 469 DMMMNILMWVPDWDGNIPEPAILKPVPLWTGKQMMSLIIPRINMEGKHFGHPD 521
[115][TOP]
>UniRef100_P08775 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Mus musculus
RepID=RPB1_MOUSE
Length = 1970
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 612
[116][TOP]
>UniRef100_P24928 DNA-directed RNA polymerase II subunit RPB1 n=2
Tax=Euarchontoglires RepID=RPB1_HUMAN
Length = 1970
Score = 249 bits (635), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 612
[117][TOP]
>UniRef100_UPI0000F2BF13 PREDICTED: similar to RNA polymerase II isoform 2 n=1
Tax=Monodelphis domestica RepID=UPI0000F2BF13
Length = 1932
Score = 248 bits (634), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIVPGHINCIRTHSTHPDD 612
[118][TOP]
>UniRef100_UPI0000F2BF12 PREDICTED: similar to RNA polymerase II isoform 1 n=1
Tax=Monodelphis domestica RepID=UPI0000F2BF12
Length = 1970
Score = 248 bits (634), Expect = 1e-64
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 496 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIVPGHINCIRTHSTHPDD 612
[119][TOP]
>UniRef100_A1YIC3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Entophlyctis
confervae-glomeratae RepID=A1YIC3_9FUNG
Length = 1013
Score = 248 bits (634), Expect = 1e-64
Identities = 116/165 (70%), Positives = 138/165 (83%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
R D+ L+ GY+V RH+ + D ++FNRQPSLHKMS+MGHR++VMPYSTFRLNLSVTSPY
Sbjct: 346 RRGGDIHLQPGYRVERHLMDDDIVIFNRQPSLHKMSMMGHRVRVMPYSTFRLNLSVTSPY 405
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ++ T+AE+MEL MVP+ IVSPQ N P+MGIVQDTL G FT RD
Sbjct: 406 NADFDGDEMNLHVPQSYETKAELMELCMVPKQIVSPQKNAPIMGIVQDTLCGIRKFTKRD 465
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP 496
TFLR+D+ M+LL+ V WDG IP PAIIKP PLWTGKQ+ SL+LP
Sbjct: 466 TFLRQDLVMNLLMWVPDWDGTIPQPAIIKPVPLWTGKQIVSLILP 510
[120][TOP]
>UniRef100_Q9NJN2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Semibalanus
balanoides RepID=Q9NJN2_SEMBA
Length = 624
Score = 248 bits (633), Expect = 2e-64
Identities = 116/177 (65%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RHI +GD ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLSVTSPYNAD
Sbjct: 75 SDLHLQCGYKVERHIIDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSVTSPYNAD 134
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAE+ + + PR IV+PQ NKPVMGIVQDTL T RD FL
Sbjct: 135 FDGDEMNLHVPQSMETRAEIENMHVTPRMIVTPQSNKPVMGIVQDTLTAVRKMTKRDVFL 194
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
++ M++L+ + WDG IP PAIIKP PLWTGKQLFSL++P +VN+VR +THPDD
Sbjct: 195 EKEEMMNMLMFLPTWDGKIPVPAIIKPRPLWTGKQLFSLIIPGNVNMVRTHSTHPDD 251
[121][TOP]
>UniRef100_Q2PYS4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spizellomyces
punctatus RepID=Q2PYS4_SPIPN
Length = 792
Score = 248 bits (633), Expect = 2e-64
Identities = 117/173 (67%), Positives = 140/173 (80%), Gaps = 1/173 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
R D+ L+ GY+V RH+ + D ++FNRQPSLHKMS+MGHR+KVMPYSTFR NLSVTSPY
Sbjct: 348 RRGGDIHLQNGYRVERHLMDNDIVIFNRQPSLHKMSMMGHRVKVMPYSTFRXNLSVTSPY 407
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ++ T+AE+MEL MVP+ IVSPQ N PVMGIVQDTL G FT RD
Sbjct: 408 NADFDGDEMNLHVPQSYETKAELMELCMVPKQIVSPQKNAPVMGIVQDTLCGIRKFTKRD 467
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLL-PDVNLVRY 517
TFLRRD M+LL+ V WDG +P PAI+KP PLWTGKQ+ SL++ P +N+ Y
Sbjct: 468 TFLRRDFVMNLLMWVPDWDGTVPQPAILKPVPLWTGKQIMSLVIPPKINVTGY 520
[122][TOP]
>UniRef100_UPI000186501C hypothetical protein BRAFLDRAFT_115025 n=1 Tax=Branchiostoma
floridae RepID=UPI000186501C
Length = 1956
Score = 248 bits (632), Expect = 3e-64
Identities = 114/177 (64%), Positives = 146/177 (82%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RHI + D ++FNRQP+LHKMS+MGHR+K++P+STFRLNLSVT+PYNAD
Sbjct: 432 SDLHLQCGYKVERHIRDDDIVIFNRQPTLHKMSMMGHRVKILPWSTFRLNLSVTTPYNAD 491
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMN+HVPQ+ TRAE+MEL MVPR I++PQ N+PVMGIVQDTL FT RD F+
Sbjct: 492 FDGDEMNMHVPQSVETRAEIMELAMVPRMIITPQSNRPVMGIVQDTLTAVRKFTKRDVFI 551
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R+ M+LL+ + WDG +P PAI+KP+PLWTGKQLFSL++P VN +R +THPD+
Sbjct: 552 DRNDMMNLLMWLPTWDGKMPQPAILKPKPLWTGKQLFSLIIPGHVNCIRMHSTHPDE 608
[123][TOP]
>UniRef100_C3ZES3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3ZES3_BRAFL
Length = 1934
Score = 248 bits (632), Expect = 3e-64
Identities = 114/177 (64%), Positives = 146/177 (82%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RHI + D ++FNRQP+LHKMS+MGHR+K++P+STFRLNLSVT+PYNAD
Sbjct: 432 SDLHLQCGYKVERHIRDDDIVIFNRQPTLHKMSMMGHRVKILPWSTFRLNLSVTTPYNAD 491
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMN+HVPQ+ TRAE+MEL MVPR I++PQ N+PVMGIVQDTL FT RD F+
Sbjct: 492 FDGDEMNMHVPQSVETRAEIMELAMVPRMIITPQSNRPVMGIVQDTLTAVRKFTKRDVFI 551
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R+ M+LL+ + WDG +P PAI+KP+PLWTGKQLFSL++P VN +R +THPD+
Sbjct: 552 DRNDMMNLLMWLPTWDGKMPQPAILKPKPLWTGKQLFSLIIPGHVNCIRMHSTHPDE 608
[124][TOP]
>UniRef100_A7S8F9 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7S8F9_NEMVE
Length = 1929
Score = 247 bits (631), Expect = 3e-64
Identities = 113/177 (63%), Positives = 146/177 (82%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RHI + D I+FNRQP+LHKMS+MGHR+K++P+STFRLNLSVT+PYNAD
Sbjct: 441 SDLHLQFGYKVERHIRDNDVIIFNRQPTLHKMSMMGHRVKILPWSTFRLNLSVTTPYNAD 500
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ ++AE+ E+MMVPR IV+PQ NKPVMGIVQD+L FT RD F+
Sbjct: 501 FDGDEMNLHVPQSLESKAEITEIMMVPRNIVTPQSNKPVMGIVQDSLTAVRKFTKRDVFI 560
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
+D M+LL+ + WDG IP PAI+KP PLWTGKQ+ S+++P +VN++R +THPDD
Sbjct: 561 EKDAMMNLLMWIPTWDGKIPQPAILKPRPLWTGKQICSMIIPGNVNVIRTHSTHPDD 617
[125][TOP]
>UniRef100_Q2PYT2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces arbuscula
RepID=Q2PYT2_ALLAR
Length = 739
Score = 247 bits (631), Expect = 3e-64
Identities = 113/177 (63%), Positives = 144/177 (81%)
Frame = +2
Query: 8 RADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNA 187
+ ++ L+ G+ V RH+ +GD I+FNRQPSLHKMS+MGH++KVMPYSTFRLNLSVTSPYNA
Sbjct: 341 KGNLGLQYGWIVERHLDDGDVIIFNRQPSLHKMSMMGHKVKVMPYSTFRLNLSVTSPYNA 400
Query: 188 DFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTF 367
DFDGDEMN+HVPQ +AE+ +L MVP I+SPQ NKPVMGIVQDTL G FT RDTF
Sbjct: 401 DFDGDEMNMHVPQPLEAKAEIQQLCMVPLQIISPQSNKPVMGIVQDTLCGITKFTRRDTF 460
Query: 368 LRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDD 538
+ +++ M+LL+ V WD +PPPAI+KP+PLWTGKQ+ SL++P VN + + +THPDD
Sbjct: 461 MDKNMVMNLLMWVPNWDRNVPPPAIMKPKPLWTGKQILSLVIPKVNCITHHSTHPDD 517
[126][TOP]
>UniRef100_Q2PYS5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hyaloraphidium
curvatum RepID=Q2PYS5_HYACU
Length = 1002
Score = 247 bits (631), Expect = 3e-64
Identities = 112/176 (63%), Positives = 142/176 (80%), Gaps = 1/176 (0%)
Frame = +2
Query: 14 DVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADF 193
D L+IG V RH+ +GD+++FNRQPSLHKMS+MGHR+K+MP+STFRLNLSVT+PYNADF
Sbjct: 346 DQPLQIGDTVERHLQDGDYVIFNRQPSLHKMSMMGHRVKIMPFSTFRLNLSVTTPYNADF 405
Query: 194 DGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLR 373
DGDEMNLH PQ++ TRAE+ E+MMVPR I+SPQ NKPVMGIVQDT G FT RD +
Sbjct: 406 DGDEMNLHAPQSYETRAEIKEIMMVPRQIISPQANKPVMGIVQDTFCGIRKFTLRDNMMT 465
Query: 374 RDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPD-VNLVRYCNTHPDD 538
RD+ M++ + + WDG PPPAI+KP+PLWTGKQL S+++P +N+ +THPDD
Sbjct: 466 RDMVMNICMWIPDWDGQPPPPAILKPQPLWTGKQLMSMVIPSRINVTGKHSTHPDD 521
[127][TOP]
>UniRef100_Q2PYR2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Umbelopsis
ramanniana RepID=Q2PYR2_UMBRA
Length = 571
Score = 247 bits (631), Expect = 3e-64
Identities = 114/179 (63%), Positives = 144/179 (80%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ ++ L+ GYKV RHI +GD ++FNRQPSLHKMS+MGHRI+VMPYSTFRLNLSVTSPY
Sbjct: 184 KRAGEIPLQYGYKVERHINDGDVVIFNRQPSLHKMSMMGHRIRVMPYSTFRLNLSVTSPY 243
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAE+ E+ MVP+ IVSPQ NKPVMGIVQDTL G FT RD
Sbjct: 244 NADFDGDEMNLHVPQSLETRAEITEICMVPKQIVSPQSNKPVMGIVQDTLAGVNKFTRRD 303
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
+FL +D+ M++++ V WDG +P PAI+KP+P+WTGKQ+ S+++P +N + HPD
Sbjct: 304 SFLSKDLVMNIVMWVPDWDGYLPTPAILKPKPMWTGKQILSMIIPKGINCQTFHFNHPD 362
[128][TOP]
>UniRef100_UPI00017B0A92 UPI00017B0A92 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B0A92
Length = 1714
Score = 247 bits (630), Expect = 4e-64
Identities = 113/177 (63%), Positives = 145/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+IGYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 414 SDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 473
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 474 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 533
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP LWTGKQ+FSL++P +N++R +THPDD
Sbjct: 534 DRGEVMNLLMFLSTWDGKMPQPAILKPRALWTGKQIFSLIIPGHINVIRTHSTHPDD 590
[129][TOP]
>UniRef100_UPI00016E658E UPI00016E658E related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E658E
Length = 1628
Score = 247 bits (630), Expect = 4e-64
Identities = 113/177 (63%), Positives = 145/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+IGYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 434 SDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 493
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 494 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 553
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP LWTGKQ+FSL++P +N++R +THPDD
Sbjct: 554 DRGEVMNLLMFLSTWDGKMPQPAILKPRALWTGKQIFSLIIPGHINVIRTHSTHPDD 610
[130][TOP]
>UniRef100_Q2PYQ5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Synchytrium
macrosporum RepID=Q2PYQ5_9FUNG
Length = 808
Score = 246 bits (629), Expect = 6e-64
Identities = 114/173 (65%), Positives = 139/173 (80%)
Frame = +2
Query: 17 VQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFD 196
+ L++GY V RH+ + D ++FNRQPSLHKMS+MGHR+KVMPYSTFRLNLSVT+PYNADFD
Sbjct: 354 IALQVGYIVERHMRDDDVVIFNRQPSLHKMSMMGHRVKVMPYSTFRLNLSVTTPYNADFD 413
Query: 197 GDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRR 376
GDEMNLH+PQ++ T AE++EL +VP+ IVSPQ N PVMGIVQDTL G FT RDTFL
Sbjct: 414 GDEMNLHLPQSYETAAEIVELCIVPKQIVSPQKNAPVMGIVQDTLCGVRKFTKRDTFLDM 473
Query: 377 DVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPD 535
D+ M+LL+ V WDG +P P IIKP PLWTGKQ SL++P++NL Y HPD
Sbjct: 474 DIMMNLLMWVPDWDGTLPTPCIIKPIPLWTGKQAMSLIIPNINLTAYHAAHPD 526
[131][TOP]
>UniRef100_UPI00005A0B1F PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide A isoform 10 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1F
Length = 1840
Score = 246 bits (628), Expect = 7e-64
Identities = 114/177 (64%), Positives = 145/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 433 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 492
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 493 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 552
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R V M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 553 ER-VFMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 608
[132][TOP]
>UniRef100_UPI00005A0B1E PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide A isoform 9 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1E
Length = 1851
Score = 246 bits (628), Expect = 7e-64
Identities = 114/177 (64%), Positives = 145/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 433 SDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 492
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 493 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 552
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R V M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 553 ER-VFMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 608
[133][TOP]
>UniRef100_B4E3V7 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4E3V7_HUMAN
Length = 1935
Score = 246 bits (627), Expect = 1e-63
Identities = 112/177 (63%), Positives = 143/177 (80%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+L KMS+MGHR++++P+STFRLNLSVT+PYNAD
Sbjct: 401 SDLHLQTGYKVERHMCDGDIVIFNRQPTLRKMSMMGHRVRILPWSTFRLNLSVTTPYNAD 460
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL
Sbjct: 461 FDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFL 520
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 521 ERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 577
[134][TOP]
>UniRef100_Q2PYR9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Conidiobolus
coronatus RepID=Q2PYR9_9FUNG
Length = 749
Score = 246 bits (627), Expect = 1e-63
Identities = 118/179 (65%), Positives = 142/179 (79%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
R A+V L +GY V RHI + D ++FNRQPSLHKMS+MGH IKVMPYSTFRLNLSVTSPY
Sbjct: 349 RRNAEVPLMVGYIVERHIIDNDVVIFNRQPSLHKMSMMGHLIKVMPYSTFRLNLSVTSPY 408
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ +RAEV+ + MVPR IVSPQ NKPVMGIVQDTL G FT RD
Sbjct: 409 NADFDGDEMNMHVPQSEESRAEVLNICMVPRQIVSPQSNKPVMGIVQDTLCGIRKFTQRD 468
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
FL R + M+LL+ V W+GV+P PA+I P+PLWTGKQ+ SL++P N++ +THPD
Sbjct: 469 AFLDRALVMNLLMWVPNWNGVLPTPAVIAPKPLWTGKQIVSLIIPKQTNMMTTHSTHPD 527
[135][TOP]
>UniRef100_A1YIC1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Blastocladiella
emersonii RepID=A1YIC1_BLAEM
Length = 1005
Score = 246 bits (627), Expect = 1e-63
Identities = 115/171 (67%), Positives = 140/171 (81%)
Frame = +2
Query: 23 LEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFDGD 202
L+ G+ V RH+++ D I+FNRQPSLHKMS+MGH++KVMPYSTFRLNLSVTSPYNADFDGD
Sbjct: 347 LQPGWVVERHLSDNDVIIFNRQPSLHKMSMMGHKVKVMPYSTFRLNLSVTSPYNADFDGD 406
Query: 203 EMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRRDV 382
EMNLHVPQ+ RAE+ +L MVP IVSPQ NKPVMGIVQDTL G FT RDTF+ + +
Sbjct: 407 EMNLHVPQSVEARAEIQQLCMVPLQIVSPQSNKPVMGIVQDTLCGITKFTRRDTFMDKAM 466
Query: 383 TMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPD 535
M+LL+ V GWDG +P PAI+KP+PLWTGKQ+ SL++P VN + +THPD
Sbjct: 467 VMNLLMWVPGWDGNVPVPAILKPKPLWTGKQILSLIIPKVNCITLHSTHPD 517
[136][TOP]
>UniRef100_Q9NJJ0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tanystylum
orbiculare RepID=Q9NJJ0_9CHEL
Length = 624
Score = 245 bits (626), Expect = 1e-63
Identities = 114/177 (64%), Positives = 145/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+DV L+ GY+V RH+ +GD ++FNRQP+LHKMS+MGHR++V+P+STFR+NLSVT+PYNAD
Sbjct: 75 SDVHLQYGYRVERHVRDGDVVIFNRQPTLHKMSMMGHRVRVLPWSTFRMNLSVTTPYNAD 134
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAE+ +L MVPR I++PQ NKPVMGIVQDTL+ T RD FL
Sbjct: 135 FDGDEMNLHVPQSLETRAEIEKLAMVPRNIITPQANKPVMGIVQDTLMAVRKMTKRDVFL 194
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
RD M+LL+ + WDG + PAI+KP+PLWTGKQLFSL++P VN +R +THPDD
Sbjct: 195 ERDQMMTLLMFLPTWDGRMMQPAILKPKPLWTGKQLFSLIIPGTVNCIRTHSTHPDD 251
[137][TOP]
>UniRef100_Q2PYQ0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Piptocephalis
corymbifera RepID=Q2PYQ0_9FUNG
Length = 565
Score = 245 bits (626), Expect = 1e-63
Identities = 117/175 (66%), Positives = 144/175 (82%), Gaps = 1/175 (0%)
Frame = +2
Query: 14 DVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADF 193
DV L++G++V RH+ +GD +VFNRQPSLHKMS+MGHR++VMPYSTFRLNLSVTSPYNADF
Sbjct: 157 DVPLQLGWRVERHLVDGDLVVFNRQPSLHKMSMMGHRVRVMPYSTFRLNLSVTSPYNADF 216
Query: 194 DGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLR 373
DGDEMNLHVPQ++ ++AE+ EL MVP+ I+SPQ N PVMGIVQDTL G LFT RDTFL
Sbjct: 217 DGDEMNLHVPQSYESKAEIRELCMVPKNIISPQKNAPVMGIVQDTLCGINLFTRRDTFLD 276
Query: 374 RDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
R M+L + + WDG IP PAI +P+PLWTGKQL SL++P +LV + +THPD
Sbjct: 277 RGQVMNLPMWLPRWDGHIPMPAICRPKPLWTGKQLVSLIIPRGTSLVTFHSTHPD 331
[138][TOP]
>UniRef100_A1YIA9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neolecta vitellina
RepID=A1YIA9_9ASCO
Length = 997
Score = 245 bits (626), Expect = 1e-63
Identities = 117/184 (63%), Positives = 146/184 (79%), Gaps = 5/184 (2%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ ++ L+ G++V RHI +GD I+FNRQPSLHKMS+MGHRI+VMPYSTFRLNLSVTSPY
Sbjct: 339 KRAGEIPLQYGWRVERHIVDGDVIIFNRQPSLHKMSMMGHRIRVMPYSTFRLNLSVTSPY 398
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAE+ E+ MVPR IVSPQGNKPVMGIVQDTL FT RD
Sbjct: 399 NADFDGDEMNLHVPQSEETRAEISEICMVPRQIVSPQGNKPVMGIVQDTLCAIRKFTKRD 458
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVR----YCNT 526
+FL +D+ M++L+ V WDG +P PAIIKP+PLW+GKQ+ S+++P +N+ R +
Sbjct: 459 SFLAQDMVMNILMWVPEWDGTVPMPAIIKPKPLWSGKQILSMVIPRGINITRNDEDQTHN 518
Query: 527 HPDD 538
PDD
Sbjct: 519 PPDD 522
[139][TOP]
>UniRef100_A7R1R1 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
RepID=A7R1R1_VITVI
Length = 708
Score = 245 bits (625), Expect = 2e-63
Identities = 115/167 (68%), Positives = 141/167 (84%), Gaps = 1/167 (0%)
Frame = +2
Query: 38 KVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFDGDEMNLH 217
+V RH+ +GD+++FNRQPSLHKMSIMGHRIK+MPYSTFRLNLSVTSPYNA FDGDEMN+H
Sbjct: 445 QVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNAAFDGDEMNMH 504
Query: 218 VPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRRDVTMSLL 397
VPQ+ TRAEV+ELMMV +CIVSPQ N+PVMGIVQDTLLGC T RDTF+ +DV M++L
Sbjct: 505 VPQSFETRAEVLELMMVTKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIAKDVFMNIL 564
Query: 398 LHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
+ E +DG IP PAI+KP PLWT KQ+F+L++P +NL+RY H +
Sbjct: 565 MWWEDFDGKIPAPAILKPRPLWTRKQVFNLIIPKQINLLRYSAWHSE 611
[140][TOP]
>UniRef100_Q8MX30 DNA-directed RNA polymerase (Fragment) n=1 Tax=Naegleria gruberi
RepID=Q8MX30_NAEGR
Length = 1590
Score = 245 bits (625), Expect = 2e-63
Identities = 114/173 (65%), Positives = 142/173 (82%)
Frame = +2
Query: 17 VQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFD 196
+QLE GYKV RH+ +GD I+FNRQPSLHKMS+MGHRIKVMPYSTFR+NLSVT+PYNADFD
Sbjct: 357 IQLEYGYKVERHLQDGDVILFNRQPSLHKMSMMGHRIKVMPYSTFRMNLSVTTPYNADFD 416
Query: 197 GDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRR 376
GDEMNLHVPQ+ T+AE++EL MVPR I++PQ N+PV+ +VQDTLL T RD F+ +
Sbjct: 417 GDEMNLHVPQSLQTKAELLELTMVPRNIITPQSNRPVIALVQDTLLAASKLTRRDVFIAK 476
Query: 377 DVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPD 535
D+ M+ L+H+ +DG +P PAI+KP+PLWTGKQLF+ LLP VNL +TH D
Sbjct: 477 DLMMNCLMHLIDFDGKLPVPAILKPKPLWTGKQLFTFLLPKVNLENTSSTHED 529
[141][TOP]
>UniRef100_P36594 DNA-directed RNA polymerase II subunit rpb1 n=1
Tax=Schizosaccharomyces pombe RepID=RPB1_SCHPO
Length = 1752
Score = 244 bits (624), Expect = 2e-63
Identities = 112/172 (65%), Positives = 140/172 (81%), Gaps = 1/172 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ D+ L G++V RHI +GD ++FNRQPSLHKMS+MGHRI+VMPYSTFRLNLSVTSPY
Sbjct: 425 KRAGDIPLRYGWRVERHIRDGDVVIFNRQPSLHKMSMMGHRIRVMPYSTFRLNLSVTSPY 484
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAE+ E+ MVP+ IVSPQ NKPVMGIVQDTL G F+ RD
Sbjct: 485 NADFDGDEMNMHVPQSEETRAEIQEITMVPKQIVSPQSNKPVMGIVQDTLAGVRKFSLRD 544
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVR 514
FL R+ M+++L V WDG++PPP I+KP+ LWTGKQ+ SL++P +NL+R
Sbjct: 545 NFLTRNAVMNIMLWVPDWDGILPPPVILKPKVLWTGKQILSLIIPKGINLIR 596
[142][TOP]
>UniRef100_Q9NJJ5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Speleonectes
tulumensis RepID=Q9NJJ5_9CRUS
Length = 636
Score = 244 bits (623), Expect = 3e-63
Identities = 112/177 (63%), Positives = 145/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RHI +GD ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLSVT+PYNAD
Sbjct: 87 SDLHLQCGYKVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSVTTPYNAD 146
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAE+ + + PR I++PQ NKPVMGIVQDTL T RD FL
Sbjct: 147 FDGDEMNLHVPQSMETRAEIENIHVTPRQIITPQANKPVMGIVQDTLCAVRKMTKRDVFL 206
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
+D M+LL+ + WDG +P PAI+KP+PLWTGKQLFSL++P +VN++R +THPD+
Sbjct: 207 EKDQMMNLLMFLPIWDGKMPQPAILKPKPLWTGKQLFSLIIPGNVNMIRTHSTHPDE 263
[143][TOP]
>UniRef100_UPI00019270E9 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 2 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270E9
Length = 2014
Score = 244 bits (622), Expect = 4e-63
Identities = 114/177 (64%), Positives = 142/177 (80%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RHI + D +VFNRQP+LHKMS+MGHR+KV+P+STFRLNLSVT+PYNAD
Sbjct: 434 SDLHLQFGYKVERHIIDNDVVVFNRQPTLHKMSMMGHRVKVLPWSTFRLNLSVTTPYNAD 493
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMN+HVPQ+ TRAE+ E++MVPR I++PQ NKP MGIVQD+L FT RD FL
Sbjct: 494 FDGDEMNMHVPQSMETRAEITEILMVPRQIITPQSNKPCMGIVQDSLCAVYKFTKRDVFL 553
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLL-PDVNLVRYCNTHPDD 538
+DV M+LLL + WDG P PAI+KP+PLWTGKQ+FSLL+ P +N + HPDD
Sbjct: 554 EKDVVMNLLLWIRKWDGKFPIPAILKPKPLWTGKQIFSLLIPPGINHSGEHSAHPDD 610
[144][TOP]
>UniRef100_UPI00019270BB PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 1 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270BB
Length = 2041
Score = 244 bits (622), Expect = 4e-63
Identities = 114/177 (64%), Positives = 142/177 (80%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RHI + D +VFNRQP+LHKMS+MGHR+KV+P+STFRLNLSVT+PYNAD
Sbjct: 434 SDLHLQFGYKVERHIIDNDVVVFNRQPTLHKMSMMGHRVKVLPWSTFRLNLSVTTPYNAD 493
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMN+HVPQ+ TRAE+ E++MVPR I++PQ NKP MGIVQD+L FT RD FL
Sbjct: 494 FDGDEMNMHVPQSMETRAEITEILMVPRQIITPQSNKPCMGIVQDSLCAVYKFTKRDVFL 553
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLL-PDVNLVRYCNTHPDD 538
+DV M+LLL + WDG P PAI+KP+PLWTGKQ+FSLL+ P +N + HPDD
Sbjct: 554 EKDVVMNLLLWIRKWDGKFPIPAILKPKPLWTGKQIFSLLIPPGINHSGEHSAHPDD 610
[145][TOP]
>UniRef100_UPI0001B7A25C UPI0001B7A25C related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25C
Length = 1968
Score = 244 bits (622), Expect = 4e-63
Identities = 113/179 (63%), Positives = 144/179 (80%), Gaps = 3/179 (1%)
Frame = +2
Query: 11 ADVQLEIGYK--VVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYN 184
+D+ L+ GYK V RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYN
Sbjct: 436 SDLHLQTGYKAFVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYN 495
Query: 185 ADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDT 364
ADFDGDEMNLH+PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD
Sbjct: 496 ADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDV 555
Query: 365 FLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
FL R M+LL+ + WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 556 FLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 614
[146][TOP]
>UniRef100_Q9NJN0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ctenolepisma lineata
RepID=Q9NJN0_CTELI
Length = 624
Score = 244 bits (622), Expect = 4e-63
Identities = 112/177 (63%), Positives = 145/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RHI +GD ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLSVTSPYNAD
Sbjct: 75 SDLHLQCGYKVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSVTSPYNAD 134
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV + + PR I++PQ NKPVMGIVQDTL T RD FL
Sbjct: 135 FDGDEMNLHVPQSMETRAEVENIHVTPRQIITPQSNKPVMGIVQDTLTAVRKMTKRDVFL 194
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
++ M++L+H+ WDG +P P+I+KP+PLWTGKQ+FSL++P +VN+ R +THPDD
Sbjct: 195 EKEQMMNILMHLPIWDGKMPYPSILKPKPLWTGKQVFSLIIPGNVNVTRTHSTHPDD 251
[147][TOP]
>UniRef100_UPI000179338A PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179338A
Length = 1862
Score = 243 bits (621), Expect = 5e-63
Identities = 112/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RHI +GD +VFNRQP+LHKMS+MGHR++V+P+STFR+NLS TSPYNAD
Sbjct: 429 SDLHLQCGYKVERHIKDGDLVVFNRQPTLHKMSMMGHRVRVLPWSTFRMNLSCTSPYNAD 488
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV + + PR I++PQ NKPVMGIVQDTL T RD FL
Sbjct: 489 FDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAIRKMTKRDVFL 548
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
++ M+LL+H+ WDG +P P I+KP+P+WTGKQLFSL++P +VNL+R +THPD+
Sbjct: 549 EKEQMMNLLMHLPIWDGKMPTPCILKPKPMWTGKQLFSLIIPGNVNLIRTHSTHPDE 605
[148][TOP]
>UniRef100_Q6JU17 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neogonodactylus
oerstedii RepID=Q6JU17_9CRUS
Length = 624
Score = 243 bits (621), Expect = 5e-63
Identities = 112/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RHIT+GD ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLSVTSPYNAD
Sbjct: 75 SDLHLQCGYKVERHITDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSVTSPYNAD 134
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAE+ L + PR I++PQ NKPVMGIVQDTL T RD FL
Sbjct: 135 FDGDEMNLHVPQSMETRAEIENLHVTPRMIITPQANKPVMGIVQDTLTAVRKMTKRDVFL 194
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
+ M+LL+ + WDG +P PAI+KP+P WTGKQ+FSL++P ++NL++ +THPDD
Sbjct: 195 EKHEMMTLLMFLPIWDGRMPQPAILKPKPYWTGKQIFSLIIPGNLNLIKTHSTHPDD 251
[149][TOP]
>UniRef100_O02462 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pedetontus saltator
RepID=O02462_9INSE
Length = 722
Score = 243 bits (621), Expect = 5e-63
Identities = 112/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RHI GD I+FNRQP+LHKMS+MGHR+KV+P+STFR+NLSVTSPYNAD
Sbjct: 75 SDLHLQCGYKVERHIREGDLIIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSVTSPYNAD 134
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV + + R I++PQ NKPVMGIVQDTL T RD FL
Sbjct: 135 FDGDEMNLHVPQSMETRAEVENIHITXRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFL 194
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
++ M++L+H+ WDG +P PAI+KP+P+WTGKQ+FSL++P +VN++R +THPDD
Sbjct: 195 EKEQMMNILMHLPIWDGKMPQPAILKPKPMWTGKQVFSLIIPGNVNMIRTHSTHPDD 251
[150][TOP]
>UniRef100_Q9NJL4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Limnadia
lenticularis RepID=Q9NJL4_9CRUS
Length = 624
Score = 243 bits (620), Expect = 6e-63
Identities = 112/177 (63%), Positives = 143/177 (80%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD +VFNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 75 SDLHLQCGYKVERHVHDGDLVVFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 134
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAE+ + + PR I++PQ NKPVMGIVQDTL T RD FL
Sbjct: 135 FDGDEMNLHVPQSMETRAEIENIHVTPRQIITPQANKPVMGIVQDTLCAVRKMTKRDVFL 194
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
++ M+LL+ + WDG +P PAIIKP PLWTGKQLF+L++P +VN++R +THPDD
Sbjct: 195 EKEQMMNLLMFLPTWDGKMPQPAIIKPRPLWTGKQLFTLIIPGNVNMIRTHSTHPDD 251
[151][TOP]
>UniRef100_Q9NJJ7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Scolopendra
polymorpha RepID=Q9NJJ7_SCOPO
Length = 734
Score = 243 bits (620), Expect = 6e-63
Identities = 113/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGH I+V+P+STFR+NLSVT+PYNAD
Sbjct: 87 SDLHLQCGYKVERHVRDGDVVIFNRQPTLHKMSMMGHHIRVLPWSTFRMNLSVTTPYNAD 146
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAE+ EL +VPR I++PQ N+PVMGIVQDTL T RD FL
Sbjct: 147 FDGDEMNLHVPQSMETRAEIEELAIVPRQIITPQSNRPVMGIVQDTLTAVRKMTKRDVFL 206
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPD-VNLVRYCNTHPDD 538
+D M+LL+ + WDG +P PAI+KP+PLWTGKQLFSL++P VN++R THPDD
Sbjct: 207 EKDQMMNLLMFLPIWDGKMPMPAILKPKPLWTGKQLFSLIIPGAVNVIRTHYTHPDD 263
[152][TOP]
>UniRef100_B3RM26 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3RM26_TRIAD
Length = 1784
Score = 243 bits (620), Expect = 6e-63
Identities = 114/179 (63%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Frame = +2
Query: 5 NRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYN 184
+R D+ L G KV RHI N D IVFNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYN
Sbjct: 422 SRDDLTLHFGDKVERHIQNDDIIVFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYN 481
Query: 185 ADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDT 364
ADFDGDEMNLHVPQ+ +RAE+ E+ MVPR IV+PQ NKPVMGIVQD+L FT RD
Sbjct: 482 ADFDGDEMNLHVPQSLESRAEITEICMVPRQIVTPQSNKPVMGIVQDSLTAVRKFTMRDV 541
Query: 365 FLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
FL ++V M+LL+ + W+G +P PAI++P+ LWTGKQ+FSL++P +VNL+R +THPDD
Sbjct: 542 FLEKEVVMNLLMWLPNWNGKMPQPAILRPKELWTGKQIFSLIIPGNVNLIRTHSTHPDD 600
[153][TOP]
>UniRef100_Q2PYS0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Entomophthora muscae
RepID=Q2PYS0_9FUNG
Length = 1007
Score = 243 bits (620), Expect = 6e-63
Identities = 114/180 (63%), Positives = 141/180 (78%), Gaps = 1/180 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
R D+ L++G+ V RHI NGD ++FNRQPSLHKMS+MGH ++V+P+STFRLNLSVTSPY
Sbjct: 344 RATGDMALQVGFCVERHIDNGDVVIFNRQPSLHKMSMMGHHVRVLPFSTFRLNLSVTSPY 403
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+H R+EV+ELMMV + IVSPQGNKPVMGIVQD+L G FT RD
Sbjct: 404 NADFDGDEMNMHVPQSHEARSEVLELMMVSKQIVSPQGNKPVMGIVQDSLCGVRKFTKRD 463
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
FL ++ +L+L + W+G IPPP I P PLWTGKQL SLL+P +N+ + HPDD
Sbjct: 464 CFLSKEFVQNLVLWIPDWNGYIPPPCIQFPVPLWTGKQLLSLLIPTGINMTTFHAAHPDD 523
[154][TOP]
>UniRef100_A1YIB1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phragmidium sp. MB
RepID=A1YIB1_9BASI
Length = 1013
Score = 243 bits (620), Expect = 6e-63
Identities = 115/170 (67%), Positives = 138/170 (81%), Gaps = 1/170 (0%)
Frame = +2
Query: 8 RADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNA 187
RAD L+ G+ V RH+ +GD+++FNRQPSLHKMS+M HRIK+MPYSTFRLNLSVT PYNA
Sbjct: 357 RADTFLQYGWIVERHLKDGDYVLFNRQPSLHKMSMMAHRIKLMPYSTFRLNLSVTPPYNA 416
Query: 188 DFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTF 367
DFDGDEMNLHVPQ+ TRAE+ ++ VPR IVSPQ NKPVMGIVQDTL G FT RD F
Sbjct: 417 DFDGDEMNLHVPQSEETRAELAQIAWVPRNIVSPQANKPVMGIVQDTLCGVRKFTLRDCF 476
Query: 368 LRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVR 514
+ RD ++LL V GWDGV+PPPAI+KP+PLWTGKQ+ S+ +P +NL R
Sbjct: 477 MDRDFVQNILLWVPGWDGVVPPPAILKPKPLWTGKQILSMCIPKGINLFR 526
[155][TOP]
>UniRef100_UPI0000D5670C PREDICTED: similar to GA13798-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D5670C
Length = 2007
Score = 243 bits (619), Expect = 8e-63
Identities = 112/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RHI +GD ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 432 SDLHLQCGYKVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 491
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV L + PR I++PQ NKPVMGIVQDTL T RD F+
Sbjct: 492 FDGDEMNLHVPQSMETRAEVENLHITPRQIITPQANKPVMGIVQDTLTAIRKMTKRDVFI 551
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
++ M+LL+ + WDG +P PAI+KP+PLWTGKQ+FSL++P +VN++R +THPDD
Sbjct: 552 EKEQMMNLLMFLPIWDGKMPRPAILKPKPLWTGKQIFSLIIPGNVNMIRTHSTHPDD 608
[156][TOP]
>UniRef100_A6GVG1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus proliferum
RepID=A6GVG1_9GLOM
Length = 478
Score = 243 bits (619), Expect = 8e-63
Identities = 115/176 (65%), Positives = 146/176 (82%), Gaps = 3/176 (1%)
Frame = +2
Query: 17 VQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFD 196
V+L+ G+KV RHI NGD I+FNRQPSLHKMS+MGH+++VMP+STFRLNLSVTSPYNADFD
Sbjct: 171 VRLQNGWKVERHINNGDIIIFNRQPSLHKMSMMGHKVRVMPFSTFRLNLSVTSPYNADFD 230
Query: 197 GDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRR 376
GDEMN+HVPQ+ T+AE+ E+ MVP+ IVSPQ NKPVMGIVQDTL G FT RDTFL +
Sbjct: 231 GDEMNMHVPQSVETKAEIKEICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSK 290
Query: 377 DVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP---DVNLVRYCNTHPD 535
D+ M++L+ V+ WDG IP P I+KP PLWTGKQ+ S+++P + + +R+ +THPD
Sbjct: 291 DLVMNILMWVKDWDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRH-STHPD 345
[157][TOP]
>UniRef100_A6GVG0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus proliferum
RepID=A6GVG0_9GLOM
Length = 477
Score = 243 bits (619), Expect = 8e-63
Identities = 115/176 (65%), Positives = 146/176 (82%), Gaps = 3/176 (1%)
Frame = +2
Query: 17 VQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFD 196
V+L+ G+KV RHI NGD I+FNRQPSLHKMS+MGH+++VMP+STFRLNLSVTSPYNADFD
Sbjct: 171 VRLQNGWKVERHINNGDIIIFNRQPSLHKMSMMGHKVRVMPFSTFRLNLSVTSPYNADFD 230
Query: 197 GDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRR 376
GDEMN+HVPQ+ T+AE+ E+ MVP+ IVSPQ NKPVMGIVQDTL G FT RDTFL +
Sbjct: 231 GDEMNMHVPQSVETKAEIKEICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSK 290
Query: 377 DVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP---DVNLVRYCNTHPD 535
D+ M++L+ V+ WDG IP P I+KP PLWTGKQ+ S+++P + + +R+ +THPD
Sbjct: 291 DLVMNILMWVKDWDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRH-STHPD 345
[158][TOP]
>UniRef100_A6GVF9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus proliferum
RepID=A6GVF9_9GLOM
Length = 498
Score = 243 bits (619), Expect = 8e-63
Identities = 115/176 (65%), Positives = 146/176 (82%), Gaps = 3/176 (1%)
Frame = +2
Query: 17 VQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFD 196
V+L+ G+KV RHI NGD I+FNRQPSLHKMS+MGH+++VMP+STFRLNLSVTSPYNADFD
Sbjct: 180 VRLQNGWKVERHINNGDIIIFNRQPSLHKMSMMGHKVRVMPFSTFRLNLSVTSPYNADFD 239
Query: 197 GDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRR 376
GDEMN+HVPQ+ T+AE+ E+ MVP+ IVSPQ NKPVMGIVQDTL G FT RDTFL +
Sbjct: 240 GDEMNMHVPQSVETKAEIKEICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSK 299
Query: 377 DVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP---DVNLVRYCNTHPD 535
D+ M++L+ V+ WDG IP P I+KP PLWTGKQ+ S+++P + + +R+ +THPD
Sbjct: 300 DLVMNILMWVKDWDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRH-STHPD 354
[159][TOP]
>UniRef100_B9PMD7 DNA-directed RNA polymerase n=2 Tax=Toxoplasma gondii
RepID=B9PMD7_TOXGO
Length = 1892
Score = 242 bits (618), Expect = 1e-62
Identities = 113/160 (70%), Positives = 135/160 (84%)
Frame = +2
Query: 14 DVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADF 193
+V LE+GY+V RH+ +GDF++FNRQPSLHKMSIMGH++K++PYSTFRLNLSVTSPYNADF
Sbjct: 430 EVVLEVGYRVERHMRDGDFVLFNRQPSLHKMSIMGHQVKILPYSTFRLNLSVTSPYNADF 489
Query: 194 DGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLR 373
DGDEMNLH+ Q+ TRAE+ LM VP+ IVSPQGNKPVMGIVQD+LL FT RDTFL
Sbjct: 490 DGDEMNLHLAQSEETRAEIKHLMKVPKQIVSPQGNKPVMGIVQDSLLAVSKFTRRDTFLT 549
Query: 374 RDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLL 493
+ + +LLL + W GV+PPPAI+ P PLWTGKQLFSLLL
Sbjct: 550 KPMVYNLLLQIPYWSGVVPPPAILHPVPLWTGKQLFSLLL 589
[160][TOP]
>UniRef100_B6KEC6 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49
RepID=B6KEC6_TOXGO
Length = 1892
Score = 242 bits (618), Expect = 1e-62
Identities = 113/160 (70%), Positives = 135/160 (84%)
Frame = +2
Query: 14 DVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADF 193
+V LE+GY+V RH+ +GDF++FNRQPSLHKMSIMGH++K++PYSTFRLNLSVTSPYNADF
Sbjct: 430 EVVLEVGYRVERHMRDGDFVLFNRQPSLHKMSIMGHQVKILPYSTFRLNLSVTSPYNADF 489
Query: 194 DGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLR 373
DGDEMNLH+ Q+ TRAE+ LM VP+ IVSPQGNKPVMGIVQD+LL FT RDTFL
Sbjct: 490 DGDEMNLHLAQSEETRAEIKHLMKVPKQIVSPQGNKPVMGIVQDSLLAVSKFTRRDTFLT 549
Query: 374 RDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLL 493
+ + +LLL + W GV+PPPAI+ P PLWTGKQLFSLLL
Sbjct: 550 KPMVYNLLLQIPYWSGVVPPPAILHPVPLWTGKQLFSLLL 589
[161][TOP]
>UniRef100_Q9BNQ2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Abacion magnum
RepID=Q9BNQ2_9MYRI
Length = 624
Score = 242 bits (617), Expect = 1e-62
Identities = 111/177 (62%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGH I+V P+STFR+NLSVT+PYNAD
Sbjct: 75 SDLHLQCGYKVERHVRDGDVVIFNRQPTLHKMSMMGHHIRVFPWSTFRMNLSVTTPYNAD 134
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAE+ EL +VPR I++PQ N+PVMGIVQDTL T RD F+
Sbjct: 135 FDGDEMNLHVPQSMETRAEIEELAIVPRQIITPQSNRPVMGIVQDTLTAVRKMTKRDVFI 194
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
++ M+LL+ + WDG +P PAI+KP+PLWTGKQLFSL++P +VN +R +THPDD
Sbjct: 195 EKEHMMNLLMFLPIWDGKVPQPAILKPKPLWTGKQLFSLIIPGNVNCIRTHSTHPDD 251
[162][TOP]
>UniRef100_Q9BMP2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Stylonychia mytilus
RepID=Q9BMP2_STYMT
Length = 1678
Score = 242 bits (617), Expect = 1e-62
Identities = 108/169 (63%), Positives = 140/169 (82%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
RNR++ + G+KV RH+ + D+++FNRQPSLHKMS+MGHR+KV+P+STFRLNLSVT+PY
Sbjct: 320 RNRSEATIHPGFKVERHLRDNDYVIFNRQPSLHKMSLMGHRVKVLPFSTFRLNLSVTTPY 379
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ++ T AE+ E+M VP IVSPQ NKPVMGIVQD+LLG MLFT +D
Sbjct: 380 NADFDGDEMNMHVPQSYETMAEIKEIMAVPNQIVSPQSNKPVMGIVQDSLLGVMLFTLKD 439
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNL 508
TF+ +++ M LL+ + D P P I+KP PLWTGKQ+FSL++PD+NL
Sbjct: 440 TFIEKELVMQLLMWAKYEDDKFPMPTILKPRPLWTGKQIFSLIIPDINL 488
[163][TOP]
>UniRef100_Q2PYQ9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Endogone pisiformis
RepID=Q2PYQ9_9FUNG
Length = 845
Score = 242 bits (617), Expect = 1e-62
Identities = 112/179 (62%), Positives = 143/179 (79%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ D+ L GYKV RHI +GD ++FNRQPSLHKMS+MGHRI+VMPYSTFRLNLSVTSPY
Sbjct: 184 KRAGDIPLSYGYKVERHINDGDVVIFNRQPSLHKMSMMGHRIRVMPYSTFRLNLSVTSPY 243
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAE+ E+ VP+ IVSPQ N PVMGIVQDTL G FT RD
Sbjct: 244 NADFDGDEMNLHVPQSVETRAEITEICRVPKQIVSPQSNXPVMGIVQDTLCGIRKFTKRD 303
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPD-VNLVRYCNTHPD 535
FL +++ M+++L+V WDG IP AI+KP+P+WTGKQ+ S+++P+ +N + ++HP+
Sbjct: 304 CFLTKEMVMNIVLYVPAWDGQIPAXAILKPKPMWTGKQIVSMVIPEXINCDTFHSSHPE 362
[164][TOP]
>UniRef100_Q2PYQ8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Paraglomus occultum
RepID=Q2PYQ8_9GLOM
Length = 847
Score = 242 bits (617), Expect = 1e-62
Identities = 113/182 (62%), Positives = 148/182 (81%), Gaps = 3/182 (1%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +V+L+IG+KV RHI +GD ++FNRQPSLHKMS+MGHR++VMPYSTFRLNLSVT+PY
Sbjct: 184 KRAGEVRLQIGWKVERHIDDGDIVIFNRQPSLHKMSMMGHRVRVMPYSTFRLNLSVTTPY 243
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+H+PQ+ T+AE+ME+ MVP+ IVSPQ NKPVMGIVQDTL FT RD
Sbjct: 244 NADFDGDEMNMHIPQSVETKAEIMEICMVPKQIVSPQSNKPVMGIVQDTLCAIRKFTKRD 303
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP---DVNLVRYCNTHP 532
FL RD+ M++L+ V WDG IP P I+KP P+WTGKQ+ S+++P + + +R+ +THP
Sbjct: 304 CFLTRDLVMNILMWVPDWDGHIPIPCILKPVPMWTGKQILSIIIPKGVNSDNLRH-STHP 362
Query: 533 DD 538
D+
Sbjct: 363 DN 364
[165][TOP]
>UniRef100_P16356 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
elegans RepID=RPB1_CAEEL
Length = 1852
Score = 242 bits (617), Expect = 1e-62
Identities = 111/176 (63%), Positives = 145/176 (82%), Gaps = 1/176 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
AD+ L+ GY+V RH+ +GD IVFNRQP+LHKMS+MGHR+K++P+STFR+NLSVTSPYNAD
Sbjct: 426 ADLHLQPGYRVERHMKDGDIIVFNRQPTLHKMSMMGHRVKILPWSTFRMNLSVTSPYNAD 485
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ E+ MVPR +++PQ NKPVMGIVQDTL + T RD F+
Sbjct: 486 FDGDEMNLHLPQSLETRAEIEEIAMVPRQLITPQANKPVMGIVQDTLCAVRMMTKRDVFI 545
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
M LL+++ WDG +P PAI+KP+PLWTGKQ+FSL++P +VN++R +THPD
Sbjct: 546 DWPFMMDLLMYLPTWDGKVPQPAILKPKPLWTGKQVFSLIIPGNVNVLRTHSTHPD 601
[166][TOP]
>UniRef100_Q9BNP9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Bothropolys
multidentatus RepID=Q9BNP9_9MYRI
Length = 624
Score = 241 bits (616), Expect = 2e-62
Identities = 112/177 (63%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ +GD ++FNRQP+LHKMS+MGH I+V+P+STFR+NLSVT+PYNAD
Sbjct: 75 SDLHLQCGYKVERHVRDGDVVIFNRQPTLHKMSMMGHHIRVLPWSTFRMNLSVTTPYNAD 134
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAE+ EL +VPR I++PQ N+PVMGIVQDTL T RD FL
Sbjct: 135 FDGDEMNLHVPQSMETRAEIEELAIVPRQIITPQSNRPVMGIVQDTLTAVRKMTKRDVFL 194
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
+D M+LL+ + WDG +P PAI+KP+PLWTGKQLFSL++P +VN +R +HPDD
Sbjct: 195 EKDQMMNLLMFLPIWDGKMPMPAILKPKPLWTGKQLFSLIIPGNVNCIRAHYSHPDD 251
[167][TOP]
>UniRef100_A8PU11 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8PU11_BRUMA
Length = 1943
Score = 241 bits (616), Expect = 2e-62
Identities = 110/177 (62%), Positives = 145/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
AD+ L+ GY+V RH+ +GD IVFNRQP+LHKMS+MGH++K++P+STFRLNLSVT+PYNAD
Sbjct: 501 ADLHLQPGYRVERHMKDGDIIVFNRQPTLHKMSMMGHKVKILPWSTFRLNLSVTTPYNAD 560
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ T+AEV E+ MVPR +++PQ NKPVMGIVQDTL + T RD F+
Sbjct: 561 FDGDEMNLHLPQSLETKAEVSEIAMVPRQLITPQANKPVMGIVQDTLTAVRMMTKRDVFI 620
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
M LL+ + WDG +P PAI+KP+PLWTGKQ+F+L++P +VN++R +THPDD
Sbjct: 621 ELPRMMDLLMQMPNWDGKVPQPAILKPKPLWTGKQVFTLIIPGNVNVLRTHSTHPDD 677
[168][TOP]
>UniRef100_A7AWJ0 DNA-directed RNA polymerase n=1 Tax=Babesia bovis
RepID=A7AWJ0_BABBO
Length = 1746
Score = 241 bits (616), Expect = 2e-62
Identities = 113/164 (68%), Positives = 136/164 (82%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +D+QLE GY+V RH+ +GD+I+FNRQPSLHKMSIMGHR KV+PYSTFRLNLSVTSPY
Sbjct: 420 KRASDLQLEYGYRVERHLQDGDYILFNRQPSLHKMSIMGHRCKVLPYSTFRLNLSVTSPY 479
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLH+ QTH TRAEV LM+VP+ IVSPQGN+PVMGIVQD+LLG FT RD
Sbjct: 480 NADFDGDEMNLHLAQTHETRAEVKHLMLVPKQIVSPQGNRPVMGIVQDSLLGISKFTRRD 539
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLL 493
FL +D+ M+LL+ + WDG +P P I P PLWTGKQ+ S++L
Sbjct: 540 CFLTKDMLMNLLMWIPYWDGKLPQPCIFHPVPLWTGKQVVSIML 583
[169][TOP]
>UniRef100_Q0PQ07 DNA-directed RNA polymerase (Fragment) n=1 Tax=Trypethelium sp.
DUKE 0000007 RepID=Q0PQ07_9PEZI
Length = 1021
Score = 241 bits (616), Expect = 2e-62
Identities = 112/177 (63%), Positives = 140/177 (79%), Gaps = 1/177 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +++ L+ G+KV RH+ +GDFI+FNRQPSLHK S+MGHR+KVMPYSTFRLNLSVTSPY
Sbjct: 357 KRASEITLQYGWKVERHLMDGDFIIFNRQPSLHKESMMGHRVKVMPYSTFRLNLSVTSPY 416
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAEVM L MVP IVSPQGNKP+MGI+QDTL G +D
Sbjct: 417 NADFDGDEMNLHVPQSEETRAEVMNLCMVPLNIVSPQGNKPLMGIIQDTLCGIYKICRKD 476
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTH 529
F+ ++ M+ LL V WDGV+PPP I++P P+WTG+Q+ S+ LP +NL R +TH
Sbjct: 477 VFITKEQVMNTLLWVPDWDGVVPPPTIVRPRPMWTGEQIISMALPAGLNLFRKASTH 533
[170][TOP]
>UniRef100_A6GVF7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus intraradices
RepID=A6GVF7_GLOIN
Length = 487
Score = 241 bits (616), Expect = 2e-62
Identities = 113/176 (64%), Positives = 146/176 (82%), Gaps = 3/176 (1%)
Frame = +2
Query: 17 VQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFD 196
V+L+ G+KV RHI NGD I+FNRQPSLHKMS+MGH+++VMP+STFRLNLSVTSPYNADFD
Sbjct: 180 VRLQNGWKVERHINNGDIIIFNRQPSLHKMSMMGHKVRVMPFSTFRLNLSVTSPYNADFD 239
Query: 197 GDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRR 376
GDEMN+H+PQ+ T+AE+ E+ MVP+ IVSPQ NKPVMGIVQDTL G FT RDTFL +
Sbjct: 240 GDEMNMHIPQSVETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSK 299
Query: 377 DVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP---DVNLVRYCNTHPD 535
D+ M++++ V+ WDG IP P I+KP PLWTGKQ+ S+++P + + +R+ +THPD
Sbjct: 300 DLVMNIIMWVKDWDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRH-STHPD 354
[171][TOP]
>UniRef100_P35074 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
briggsae RepID=RPB1_CAEBR
Length = 1853
Score = 241 bits (616), Expect = 2e-62
Identities = 111/176 (63%), Positives = 145/176 (82%), Gaps = 1/176 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
AD+ L+ GY+V RH+ +GD IVFNRQP+LHKMS+MGHR+K++P+STFR+NLSVTSPYNAD
Sbjct: 430 ADLHLQPGYRVERHMKDGDIIVFNRQPTLHKMSMMGHRVKILPWSTFRMNLSVTSPYNAD 489
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+ E+ MVPR +++PQ NKPVMGIVQDTL + T RD F+
Sbjct: 490 FDGDEMNLHLPQSLETRAEIEEIAMVPRQLITPQANKPVMGIVQDTLCAVRMMTKRDIFI 549
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
M LL+++ WDG +P PAI+KP+PLWTGKQ+FSL++P +VN++R +THPD
Sbjct: 550 DWPFMMDLLMYLPTWDGKVPQPAILKPKPLWTGKQVFSLIIPGNVNVLRTHSTHPD 605
[172][TOP]
>UniRef100_UPI000186D846 predicted protein n=1 Tax=Pediculus humanus corporis
RepID=UPI000186D846
Length = 1885
Score = 241 bits (615), Expect = 2e-62
Identities = 111/177 (62%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RHI +GD ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 430 SDLHLQCGYKVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 489
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV L + PR I++PQ NKPVMGIVQDTL T RD FL
Sbjct: 490 FDGDEMNLHVPQSMETRAEVENLHVTPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFL 549
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
++ M++L+ + WDG +P PAI+KP+PLWTGKQ+FSL++P +VN++R +THPD+
Sbjct: 550 EKEQMMNILMFLPIWDGKMPQPAILKPKPLWTGKQVFSLIIPGNVNMIRTHSTHPDE 606
[173][TOP]
>UniRef100_UPI000179348F PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179348F
Length = 1862
Score = 241 bits (614), Expect = 3e-62
Identities = 109/177 (61%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RHI +GD +VFNRQP+LHKMS+MGHR++V+P+STFR+NLS TSPYNAD
Sbjct: 429 SDLHLQCGYKVERHIKDGDLVVFNRQPTLHKMSMMGHRVRVLPWSTFRMNLSCTSPYNAD 488
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV + + PR I++PQ NKPVMGIVQDTL T RD F+
Sbjct: 489 FDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAIRKMTKRDVFI 548
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
++ M+LL+H+ WDG +P P I+KP+P+WTGKQ+FSL++P +VN++R +THPD+
Sbjct: 549 EKEQMMNLLMHLPIWDGKMPTPCILKPKPMWTGKQVFSLIIPGNVNMIRTHSTHPDE 605
[174][TOP]
>UniRef100_A1YIA8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Taphrina deformans
RepID=A1YIA8_9ASCO
Length = 1001
Score = 241 bits (614), Expect = 3e-62
Identities = 107/165 (64%), Positives = 135/165 (81%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+N D L+ G+ V RH+ NGD ++FNRQPSLHKMS+MGHR++VMPYSTFRLNLSVTSPY
Sbjct: 342 KNAGDTPLQYGWTVERHLQNGDVVIFNRQPSLHKMSMMGHRVRVMPYSTFRLNLSVTSPY 401
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAE+ E+ MVPR I++PQ NKP MGIVQD L G FT RD
Sbjct: 402 NADFDGDEMNLHVPQSEETRAEITEICMVPRQILAPQANKPCMGIVQDALCGIRKFTIRD 461
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP 496
TF+ + M++L+ V GW+G++PPPAI+KP+ LWTGKQ+ S+++P
Sbjct: 462 TFMAKSHVMNILMWVPGWNGIVPPPAILKPQQLWTGKQILSMVIP 506
[175][TOP]
>UniRef100_Q9NJK7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nebalia hessleri
RepID=Q9NJK7_9CRUS
Length = 624
Score = 240 bits (613), Expect = 4e-62
Identities = 110/177 (62%), Positives = 143/177 (80%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RHIT+GD ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLSVTSPYNAD
Sbjct: 75 SDLHLQCGYKVERHITDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSVTSPYNAD 134
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAE+ + + PR I++PQ NKPVMGIVQDTL T RD FL
Sbjct: 135 FDGDEMNLHVPQSMETRAEIENMHVTPRMIITPQSNKPVMGIVQDTLTAVRKMTKRDVFL 194
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
M+ L+ + WDG +P PAI+KP+PLWTGKQLF++++P ++N+V+ +THPDD
Sbjct: 195 EMHEMMNCLMFLPIWDGKMPQPAILKPKPLWTGKQLFTMIIPGNLNMVKTHSTHPDD 251
[176][TOP]
>UniRef100_Q9NJK2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Polyxenus
fasciculatus RepID=Q9NJK2_9MYRI
Length = 751
Score = 240 bits (612), Expect = 5e-62
Identities = 109/177 (61%), Positives = 145/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GY+V RH+ +GD ++FNRQP+LHKMS+MGH I+V P+STFR+NLSVT+PYNAD
Sbjct: 87 SDLHLQCGYRVERHVRDGDVVIFNRQPTLHKMSMMGHHIRVFPWSTFRMNLSVTTPYNAD 146
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAE+ EL +VPR I++PQ N+PVMGIVQDTL T RD FL
Sbjct: 147 FDGDEMNLHVPQSMETRAEIEELAIVPRQIITPQSNRPVMGIVQDTLTAVRKMTKRDVFL 206
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
+D M++L+ + WDG +P PAI+KP+P+WTGKQ+FSL++P +VN++R +THPDD
Sbjct: 207 DKDQMMNILMFLPIWDGKMPQPAILKPKPVWTGKQVFSLIIPGNVNMIRTHSTHPDD 263
[177][TOP]
>UniRef100_Q4UCP5 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
RepID=Q4UCP5_THEAN
Length = 1678
Score = 240 bits (612), Expect = 5e-62
Identities = 117/179 (65%), Positives = 142/179 (79%), Gaps = 8/179 (4%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +++QLE GYKV RH+ +GD+I+FNRQPSLHKMSIMGHR K++PYSTFRLNLSVT+PY
Sbjct: 420 KKSSELQLEYGYKVERHMQDGDYILFNRQPSLHKMSIMGHRAKILPYSTFRLNLSVTTPY 479
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLH+ QTH TRAEV LM+VP+ IVSPQGN+PVMGIVQD+LL FT RD
Sbjct: 480 NADFDGDEMNLHLVQTHETRAEVKHLMLVPKQIVSPQGNRPVMGIVQDSLLAVSKFTKRD 539
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLL--------PDVNLVR 514
TFL RD MSLL+ + WDG +P PAI P+ LWTGKQ+ S+LL ++NL+R
Sbjct: 540 TFLTRDELMSLLIWIPYWDGKLPQPAIFFPKNLWTGKQVISVLLTFNQSQGITNINLIR 598
[178][TOP]
>UniRef100_Q4N0F9 DNA-directed RNA polymerase n=1 Tax=Theileria parva
RepID=Q4N0F9_THEPA
Length = 1681
Score = 240 bits (612), Expect = 5e-62
Identities = 117/179 (65%), Positives = 142/179 (79%), Gaps = 8/179 (4%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +++QLE GYKV RH+ +GD+I+FNRQPSLHKMSIMGHR K++PYSTFRLNLSVT+PY
Sbjct: 420 KKSSELQLEYGYKVERHMQDGDYILFNRQPSLHKMSIMGHRAKILPYSTFRLNLSVTTPY 479
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLH+ QTH TRAEV LM+VP+ IVSPQGN+PVMGIVQD+LL FT RD
Sbjct: 480 NADFDGDEMNLHLVQTHETRAEVKHLMLVPKQIVSPQGNRPVMGIVQDSLLAVSKFTKRD 539
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLL--------PDVNLVR 514
TFL RD MSLL+ + WDG +P PAI P+ LWTGKQ+ S+LL ++NL+R
Sbjct: 540 TFLTRDELMSLLIWIPYWDGKLPQPAIFFPKNLWTGKQVISVLLTFNQSQGITNINLIR 598
[179][TOP]
>UniRef100_Q2PYQ7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus intraradices
RepID=Q2PYQ7_GLOIN
Length = 585
Score = 240 bits (612), Expect = 5e-62
Identities = 113/176 (64%), Positives = 145/176 (82%), Gaps = 3/176 (1%)
Frame = +2
Query: 17 VQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFD 196
V+L+ G+KV RHI NGD I+FNRQPSLHKMS+MGH+++VMP+STFRLNL VTSPYNADFD
Sbjct: 189 VRLQNGWKVERHINNGDIIIFNRQPSLHKMSMMGHKVRVMPFSTFRLNLFVTSPYNADFD 248
Query: 197 GDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRR 376
GDEMN+H+PQ+ T+AE+ E+ MVP+ IVSPQ NKPVMGIVQDTL G FT RDTFL +
Sbjct: 249 GDEMNMHIPQSVETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSK 308
Query: 377 DVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP---DVNLVRYCNTHPD 535
D+ M++L+ V+ WDG IP P I+KP PLWTGKQ+ S+++P + + +R+ +THPD
Sbjct: 309 DLVMNILMWVKDWDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRH-STHPD 363
[180][TOP]
>UniRef100_A8IRZ2 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IRZ2_CHLRE
Length = 1789
Score = 239 bits (611), Expect = 7e-62
Identities = 107/156 (68%), Positives = 131/156 (83%)
Frame = +2
Query: 41 VVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFDGDEMNLHV 220
V RH+ NGD ++FNRQPSLHKMS+MGHR++++PYSTFRLNLSVT+PYNADFDGDEMN+HV
Sbjct: 442 VERHLINGDLVLFNRQPSLHKMSMMGHRVRILPYSTFRLNLSVTTPYNADFDGDEMNMHV 501
Query: 221 PQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRRDVTMSLLL 400
QTH TRAE+ LMMVPR IVSPQ NKPVMGIVQD LLG + T RD F+ +D M+ ++
Sbjct: 502 AQTHETRAEMANLMMVPRNIVSPQANKPVMGIVQDALLGTRMMTKRDIFIEKDNFMNCVM 561
Query: 401 HVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNL 508
+E WDG +P PA++KP PLWTGKQ+FS+ +PDVNL
Sbjct: 562 GIEDWDGTVPMPAVLKPRPLWTGKQIFSMFVPDVNL 597
[181][TOP]
>UniRef100_Q6JTZ3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Scutigerella sp.
Scu3 RepID=Q6JTZ3_9MYRI
Length = 624
Score = 239 bits (611), Expect = 7e-62
Identities = 111/177 (62%), Positives = 144/177 (81%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+IGYKV RH+ +GD IVFNRQP+LHKMS+MGH +V+P+STFR+NLSVT+PYNAD
Sbjct: 75 SDLHLQIGYKVERHVRDGDVIVFNRQPTLHKMSMMGHHXRVLPWSTFRMNLSVTTPYNAD 134
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ++ TRAEV EL +VPR I++PQ N+PVMGIVQDTL T RD FL
Sbjct: 135 FDGDEMNLHVPQSNETRAEVEELAIVPRQIITPQSNRPVMGIVQDTLTAVRKMTKRDVFL 194
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
+D M+LL+ + W+G +P P I+KP+P WTGKQ+FSL++P +VN +R +THPD+
Sbjct: 195 DKDQMMNLLMFLPTWNGKVPQPCILKPKPQWTGKQIFSLIIPGNVNCIRTHSTHPDE 251
[182][TOP]
>UniRef100_A0AAR2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Geosiphon pyriformis
RepID=A0AAR2_9GLOM
Length = 649
Score = 239 bits (611), Expect = 7e-62
Identities = 112/180 (62%), Positives = 143/180 (79%), Gaps = 1/180 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ +V+L+ G+KV RH+ +GD ++FNRQPSLHKMS+MGH+++VMPYSTFRLNLSVTSPY
Sbjct: 190 KRAGEVRLQYGWKVERHLNDGDVVIFNRQPSLHKMSMMGHKVRVMPYSTFRLNLSVTSPY 249
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ TRAE+ E+ MVP+ IVSPQ NKPVMGIVQDTL FT RD
Sbjct: 250 NADFDGDEMNMHVPQSVETRAEITEICMVPKQIVSPQSNKPVMGIVQDTLCAVRKFTKRD 309
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
FL RD+ M++L+ V WDG IP P IIKP P+WTGKQ+ SL++P +N + + HP++
Sbjct: 310 CFLSRDLVMNILMWVPEWDGRIPRPCIIKPIPMWTGKQILSLIIPKGINCDGFHSGHPEN 369
[183][TOP]
>UniRef100_A7J591 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anaptychia palmatula
RepID=A7J591_9LECA
Length = 1020
Score = 239 bits (610), Expect = 9e-62
Identities = 118/180 (65%), Positives = 140/180 (77%), Gaps = 1/180 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
R D+ L+ G+KV RHI +GDFI+FNRQPSLHK S+MGHR++VMPYSTFRLNLSVTSPY
Sbjct: 359 RRAGDLVLQYGWKVERHIVDGDFIIFNRQPSLHKESMMGHRVRVMPYSTFRLNLSVTSPY 418
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAEV +L MVP IVSPQ N P+MGIVQDTL G RD
Sbjct: 419 NADFDGDEMNLHVPQSEETRAEVNQLCMVPLNIVSPQRNSPLMGIVQDTLCGIYKICRRD 478
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
FL + M++LL V WDG+IP PAI+KP P+WTGKQ+ SL++P +NLVR N +P D
Sbjct: 479 VFLNQGQVMNILLWVPDWDGIIPQPAILKPTPVWTGKQIVSLIIPAGLNLVRDKNHNPLD 538
[184][TOP]
>UniRef100_Q2PYR6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coemansia reversa
RepID=Q2PYR6_9FUNG
Length = 1013
Score = 238 bits (608), Expect = 2e-61
Identities = 111/179 (62%), Positives = 138/179 (77%), Gaps = 1/179 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ R D L+IGY+V R++ + D I+FNRQPSLHKMS+MGHR+KVMPYSTFRLNLSVTSPY
Sbjct: 351 KQRGDFPLQIGYRVERNLIDDDVIIFNRQPSLHKMSMMGHRVKVMPYSTFRLNLSVTSPY 410
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ +RAE+ E+ MVP+ +SPQ NKPVMGIVQDTL FT RD
Sbjct: 411 NADFDGDEMNLHVPQSEESRAEIKEICMVPKQFISPQSNKPVMGIVQDTLCAIRKFTRRD 470
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
FL D+ M L++ + WDG +P P I+KP+PLWTGKQ++S+++P N R HPD
Sbjct: 471 NFLDTDMIMLLMMWLPDWDGTLPTPCILKPKPLWTGKQIYSMVIPKGTNCYRESEGHPD 529
[185][TOP]
>UniRef100_UPI0000E48673 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 1 n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI0000E48673
Length = 1880
Score = 238 bits (607), Expect = 2e-61
Identities = 110/176 (62%), Positives = 143/176 (81%), Gaps = 1/176 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+K++ +STFRLNLSVT+PYNAD
Sbjct: 430 SDLHLQCGYKVERHLRDDDVVIFNRQPTLHKMSMMGHRVKILTWSTFRLNLSVTTPYNAD 489
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV E++MV R +++PQ N+PVMGIVQD+L FT RD F+
Sbjct: 490 FDGDEMNLHVPQSMETRAEVSEMIMVSRNMITPQSNRPVMGIVQDSLCAIRKFTKRDVFV 549
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPD-VNLVRYCNTHPD 535
+ M+LLL + WDG IP PAI+KP PLWTGKQL +L++PD VN+VR+ +THPD
Sbjct: 550 TKPNVMNLLLFLPNWDGKIPKPAILKPRPLWTGKQLLTLVIPDNVNVVRFHSTHPD 605
[186][TOP]
>UniRef100_UPI0000E48672 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 2 n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI0000E48672
Length = 1913
Score = 238 bits (607), Expect = 2e-61
Identities = 110/176 (62%), Positives = 143/176 (81%), Gaps = 1/176 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+K++ +STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQCGYKVERHLRDDDVVIFNRQPTLHKMSMMGHRVKILTWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV E++MV R +++PQ N+PVMGIVQD+L FT RD F+
Sbjct: 496 FDGDEMNLHVPQSMETRAEVSEMIMVSRNMITPQSNRPVMGIVQDSLCAIRKFTKRDVFV 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPD-VNLVRYCNTHPD 535
+ M+LLL + WDG IP PAI+KP PLWTGKQL +L++PD VN+VR+ +THPD
Sbjct: 556 TKPNVMNLLLFLPNWDGKIPKPAILKPRPLWTGKQLLTLVIPDNVNVVRFHSTHPD 611
[187][TOP]
>UniRef100_UPI0000E48671 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 3 n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI0000E48671
Length = 1921
Score = 238 bits (607), Expect = 2e-61
Identities = 110/176 (62%), Positives = 143/176 (81%), Gaps = 1/176 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+K++ +STFRLNLSVT+PYNAD
Sbjct: 436 SDLHLQCGYKVERHLRDDDVVIFNRQPTLHKMSMMGHRVKILTWSTFRLNLSVTTPYNAD 495
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV E++MV R +++PQ N+PVMGIVQD+L FT RD F+
Sbjct: 496 FDGDEMNLHVPQSMETRAEVSEMIMVSRNMITPQSNRPVMGIVQDSLCAIRKFTKRDVFV 555
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPD-VNLVRYCNTHPD 535
+ M+LLL + WDG IP PAI+KP PLWTGKQL +L++PD VN+VR+ +THPD
Sbjct: 556 TKPNVMNLLLFLPNWDGKIPKPAILKPRPLWTGKQLLTLVIPDNVNVVRFHSTHPD 611
[188][TOP]
>UniRef100_Q25203 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ilyanassa obsoleta
RepID=Q25203_9CAEN
Length = 1343
Score = 238 bits (607), Expect = 2e-61
Identities = 112/176 (63%), Positives = 141/176 (80%), Gaps = 1/176 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+IGYKV RH+ + D ++FNRQP+LHKMS+M HR+KV+P+STFR+NLSVT+PYNAD
Sbjct: 350 SDLHLQIGYKVERHMQDNDVVIFNRQPTLHKMSMMCHRVKVLPWSTFRMNLSVTTPYNAD 409
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ TRAE+M L VPR I++PQ N+PVMGIVQDTL T RD FL
Sbjct: 410 FDGDEMNLHLPQSLETRAEIMNLCAVPRMIITPQANRPVMGIVQDTLTAVRKMTKRDVFL 469
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPD-VNLVRYCNTHPD 535
R M LL+ + WDG +P PAIIKPEPLWTGKQ+FSL++P VN++R +THPD
Sbjct: 470 TRAQMMHLLMFLPTWDGRMPQPAIIKPEPLWTGKQIFSLVIPGRVNVIRTHSTHPD 525
[189][TOP]
>UniRef100_Q5CH45 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium hominis
RepID=Q5CH45_CRYHO
Length = 1895
Score = 238 bits (606), Expect = 3e-61
Identities = 110/163 (67%), Positives = 136/163 (83%)
Frame = +2
Query: 5 NRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYN 184
N ++ L+ G+KV RH+ N D ++FNRQPSLHKMSIMGHR+K++PYSTFRLNLSVTSPYN
Sbjct: 416 NNSNNMLQYGWKVERHMKNDDLVLFNRQPSLHKMSIMGHRVKILPYSTFRLNLSVTSPYN 475
Query: 185 ADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDT 364
ADFDGDEMNLH+ Q+H TR+E+ LMMVPR IVSPQGNKPV+GIVQD+LLG L T + T
Sbjct: 476 ADFDGDEMNLHLAQSHETRSEIKNLMMVPRQIVSPQGNKPVIGIVQDSLLGIFLLTRKST 535
Query: 365 FLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLL 493
FL RD + LLL + W+G IPPPAI++P+PLWTGKQ+ ++LL
Sbjct: 536 FLTRDKFLQLLLCIPYWNGNIPPPAILRPQPLWTGKQIITVLL 578
[190][TOP]
>UniRef100_UPI000051A77E PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit isoform 2 n=1 Tax=Apis mellifera
RepID=UPI000051A77E
Length = 1422
Score = 237 bits (605), Expect = 3e-61
Identities = 106/177 (59%), Positives = 142/177 (80%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GY+V RHI +GD ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 428 SDLHLQCGYRVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 487
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH PQ+ TRAEV + + PR I++PQ NKPVMGIVQDTL T RD F+
Sbjct: 488 FDGDEMNLHAPQSMETRAEVENIHVTPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFI 547
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
++ M++L+ + WDG +P P I+KP+PLWTGKQ+FSL++P +VN++R +THPD+
Sbjct: 548 EKEQMMNILMFLPSWDGKMPQPCILKPKPLWTGKQIFSLIIPGNVNMIRTHSTHPDE 604
[191][TOP]
>UniRef100_A5BJX4 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
RepID=A5BJX4_VITVI
Length = 305
Score = 237 bits (605), Expect = 3e-61
Identities = 110/162 (67%), Positives = 135/162 (83%), Gaps = 1/162 (0%)
Frame = +2
Query: 53 ITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQTH 232
+ +GD+++FNRQPSLHKMS MGHRI +MPYSTFRLNLSV SPYNADFDGDEMN+HVPQ+
Sbjct: 48 MNDGDYVLFNRQPSLHKMSFMGHRINIMPYSTFRLNLSVASPYNADFDGDEMNMHVPQSF 107
Query: 233 ATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRRDVTMSLLLHVEG 412
TRAEV+ELMMVP+CIVSPQ N+PVMGIVQDTLLGC T RDTF+ +DV M++L+ E
Sbjct: 108 ETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITRRDTFIEKDVFMNILMWWED 167
Query: 413 WDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPD 535
+DG IP PAI+KP PLW KQ+F+L++P +NL+RY H +
Sbjct: 168 FDGKIPAPAILKPRPLWIRKQVFNLIIPKQINLLRYSAWHSE 209
[192][TOP]
>UniRef100_Q9XZU9 DNA-directed RNA polymerase n=1 Tax=Drosophila subobscura
RepID=Q9XZU9_DROSU
Length = 1889
Score = 237 bits (605), Expect = 3e-61
Identities = 108/177 (61%), Positives = 141/177 (79%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 428 SDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 487
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV + + PR I++PQ NKPVMGIVQDTL T RD F+
Sbjct: 488 FDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFI 547
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R+ M+LL+ + WDG +P P I+KP PLWTGKQ+FSL++P +VN++R +THPD+
Sbjct: 548 TREQVMNLLMFLPTWDGKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHSTHPDE 604
[193][TOP]
>UniRef100_Q9XZU8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drosophila
pseudoobscura pseudoobscura RepID=Q9XZU8_DROPS
Length = 1811
Score = 237 bits (605), Expect = 3e-61
Identities = 108/177 (61%), Positives = 141/177 (79%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 350 SDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 409
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV + + PR I++PQ NKPVMGIVQDTL T RD F+
Sbjct: 410 FDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFI 469
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R+ M+LL+ + WDG +P P I+KP PLWTGKQ+FSL++P +VN++R +THPD+
Sbjct: 470 TREQVMNLLMFLPTWDGKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHSTHPDE 526
[194][TOP]
>UniRef100_Q9XZS2 DNA-directed RNA polymerase n=1 Tax=Drosophila madeirensis
RepID=Q9XZS2_DROMD
Length = 1889
Score = 237 bits (605), Expect = 3e-61
Identities = 108/177 (61%), Positives = 141/177 (79%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 428 SDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 487
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV + + PR I++PQ NKPVMGIVQDTL T RD F+
Sbjct: 488 FDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFI 547
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R+ M+LL+ + WDG +P P I+KP PLWTGKQ+FSL++P +VN++R +THPD+
Sbjct: 548 TREQVMNLLMFLPTWDGKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHSTHPDE 604
[195][TOP]
>UniRef100_Q9XZS1 DNA-directed RNA polymerase n=1 Tax=Drosophila guanche
RepID=Q9XZS1_DROGU
Length = 1889
Score = 237 bits (605), Expect = 3e-61
Identities = 108/177 (61%), Positives = 141/177 (79%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 428 SDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 487
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV + + PR I++PQ NKPVMGIVQDTL T RD F+
Sbjct: 488 FDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFI 547
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R+ M+LL+ + WDG +P P I+KP PLWTGKQ+FSL++P +VN++R +THPD+
Sbjct: 548 TREQVMNLLMFLPTWDGKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHSTHPDE 604
[196][TOP]
>UniRef100_Q29IN2 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
pseudoobscura RepID=Q29IN2_DROPS
Length = 1889
Score = 237 bits (605), Expect = 3e-61
Identities = 108/177 (61%), Positives = 141/177 (79%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 428 SDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 487
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV + + PR I++PQ NKPVMGIVQDTL T RD F+
Sbjct: 488 FDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFI 547
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R+ M+LL+ + WDG +P P I+KP PLWTGKQ+FSL++P +VN++R +THPD+
Sbjct: 548 TREQVMNLLMFLPTWDGKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHSTHPDE 604
[197][TOP]
>UniRef100_B4PY98 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4PY98_DROYA
Length = 1889
Score = 237 bits (605), Expect = 3e-61
Identities = 108/177 (61%), Positives = 141/177 (79%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 428 SDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 487
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV + + PR I++PQ NKPVMGIVQDTL T RD F+
Sbjct: 488 FDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFI 547
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R+ M+LL+ + WDG +P P I+KP PLWTGKQ+FSL++P +VN++R +THPD+
Sbjct: 548 TREQVMNLLMFLPTWDGKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHSTHPDE 604
[198][TOP]
>UniRef100_B4L732 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4L732_DROMO
Length = 1889
Score = 237 bits (605), Expect = 3e-61
Identities = 108/177 (61%), Positives = 141/177 (79%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 428 SDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 487
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV + + PR I++PQ NKPVMGIVQDTL T RD F+
Sbjct: 488 FDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFI 547
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R+ M+LL+ + WDG +P P I+KP PLWTGKQ+FSL++P +VN++R +THPD+
Sbjct: 548 TREQVMNLLMFLPTWDGKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHSTHPDE 604
[199][TOP]
>UniRef100_B4JXA6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4JXA6_DROGR
Length = 1889
Score = 237 bits (605), Expect = 3e-61
Identities = 108/177 (61%), Positives = 141/177 (79%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 428 SDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 487
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV + + PR I++PQ NKPVMGIVQDTL T RD F+
Sbjct: 488 FDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFI 547
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R+ M+LL+ + WDG +P P I+KP PLWTGKQ+FSL++P +VN++R +THPD+
Sbjct: 548 TREQVMNLLMFLPTWDGKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHSTHPDE 604
[200][TOP]
>UniRef100_B4H2R8 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
RepID=B4H2R8_DROPE
Length = 1804
Score = 237 bits (605), Expect = 3e-61
Identities = 108/177 (61%), Positives = 141/177 (79%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 428 SDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 487
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV + + PR I++PQ NKPVMGIVQDTL T RD F+
Sbjct: 488 FDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFI 547
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R+ M+LL+ + WDG +P P I+KP PLWTGKQ+FSL++P +VN++R +THPD+
Sbjct: 548 TREQVMNLLMFLPTWDGKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHSTHPDE 604
[201][TOP]
>UniRef100_B3NUC1 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3NUC1_DROER
Length = 1889
Score = 237 bits (605), Expect = 3e-61
Identities = 108/177 (61%), Positives = 141/177 (79%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 428 SDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 487
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV + + PR I++PQ NKPVMGIVQDTL T RD F+
Sbjct: 488 FDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFI 547
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R+ M+LL+ + WDG +P P I+KP PLWTGKQ+FSL++P +VN++R +THPD+
Sbjct: 548 TREQVMNLLMFLPTWDGKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHSTHPDE 604
[202][TOP]
>UniRef100_Q2PYS8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rozella allomycis
RepID=Q2PYS8_9FUNG
Length = 809
Score = 237 bits (605), Expect = 3e-61
Identities = 111/180 (61%), Positives = 144/180 (80%), Gaps = 1/180 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
R + DV L+ GY V RHI +GD ++FNRQPSLHKMS+MGHRIKVMPYSTFRLNLSVT+PY
Sbjct: 150 RFKTDVVLQPGYLVERHINDGDVVLFNRQPSLHKMSMMGHRIKVMPYSTFRLNLSVTTPY 209
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLH+PQ+ +AE++EL +VP IVSPQ NKP MGIVQDTL G FT R+
Sbjct: 210 NADFDGDEMNLHIPQSVEAKAELVELALVPTQIVSPQSNKPCMGIVQDTLCGVRKFTRRE 269
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
+FL + + M++++ + W+G +P P I+KP PLW+GKQ+FS+++P VN V + +THPD+
Sbjct: 270 SFLNKAMVMNIVMWLPSWEGKLPRPCILKPVPLWSGKQIFSMIIPKGVNCVTFHSTHPDN 329
[203][TOP]
>UniRef100_A6GVG2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus proliferum
RepID=A6GVG2_9GLOM
Length = 478
Score = 237 bits (605), Expect = 3e-61
Identities = 113/176 (64%), Positives = 144/176 (81%), Gaps = 3/176 (1%)
Frame = +2
Query: 17 VQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFD 196
V+L+ G+KV RHI NGD I+FNRQ SLHKMS+MGH+++VMP+STFRLNLSVTSPYNADFD
Sbjct: 171 VRLQNGWKVERHINNGDIIIFNRQSSLHKMSMMGHKVRVMPFSTFRLNLSVTSPYNADFD 230
Query: 197 GDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRR 376
GDEMN+HVPQ+ T+AE+ E+ VP+ IVSPQ NKPVMGIVQDTL G FT RDTFL +
Sbjct: 231 GDEMNMHVPQSVETKAEIKEICTVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSK 290
Query: 377 DVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP---DVNLVRYCNTHPD 535
D+ M++L+ V+ WDG IP P I+KP PLWTGKQ+ S+++P + + +R+ +THPD
Sbjct: 291 DLVMNILMWVKDWDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRH-STHPD 345
[204][TOP]
>UniRef100_UPI00005A0B21 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 12 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B21
Length = 1922
Score = 237 bits (604), Expect = 5e-61
Identities = 108/167 (64%), Positives = 136/167 (81%), Gaps = 1/167 (0%)
Frame = +2
Query: 41 VVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFDGDEMNLHV 220
V RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNADFDGDEMNLH+
Sbjct: 446 VERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNADFDGDEMNLHL 505
Query: 221 PQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRRDVTMSLLL 400
PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL R M+LL+
Sbjct: 506 PQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLM 565
Query: 401 HVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
+ WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 566 FLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 612
[205][TOP]
>UniRef100_UPI00005A0B20 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 11 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B20
Length = 1923
Score = 237 bits (604), Expect = 5e-61
Identities = 108/167 (64%), Positives = 136/167 (81%), Gaps = 1/167 (0%)
Frame = +2
Query: 41 VVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFDGDEMNLHV 220
V RH+ +GD ++FNRQP+LHKMS+MGHR++++P+STFRLNLSVT+PYNADFDGDEMNLH+
Sbjct: 447 VERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNADFDGDEMNLHL 506
Query: 221 PQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRRDVTMSLLL 400
PQ+ TRAE+ EL MVPR IV+PQ N+PVMGIVQDTL FT RD FL R M+LL+
Sbjct: 507 PQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLM 566
Query: 401 HVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
+ WDG +P PAI+KP PLWTGKQ+FSL++P +N +R +THPDD
Sbjct: 567 FLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDD 613
[206][TOP]
>UniRef100_B4MAN9 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4MAN9_DROVI
Length = 1889
Score = 237 bits (604), Expect = 5e-61
Identities = 108/177 (61%), Positives = 140/177 (79%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 428 SDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 487
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV + + PR I++PQ NKPVMGIVQDTL T RD F+
Sbjct: 488 FDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFI 547
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R+ M+LL+ + WDG +P P I+KP PLWTGKQ+FSL++P +VN++R THPD+
Sbjct: 548 TREQVMNLLMFLPTWDGKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRAHETHPDE 604
[207][TOP]
>UniRef100_B3MQ29 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3MQ29_DROAN
Length = 1889
Score = 237 bits (604), Expect = 5e-61
Identities = 108/177 (61%), Positives = 141/177 (79%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 428 SDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 487
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV + + PR I++PQ NKPVMGIVQDTL T RD F+
Sbjct: 488 FDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFI 547
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R+ M+LL+ + WDG +P P I+KP PLWTGKQ+FSL++P +VN++R +THPD+
Sbjct: 548 TREQMMNLLMFLPTWDGKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHSTHPDE 604
[208][TOP]
>UniRef100_A5H2F1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tornabea
scutellifera RepID=A5H2F1_9LECA
Length = 993
Score = 237 bits (604), Expect = 5e-61
Identities = 114/172 (66%), Positives = 137/172 (79%), Gaps = 1/172 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
R D+ L+ G+KV RHI +GDFI+FNRQPSLHK S+MGHR++VMPYSTFRLNLSVTSPY
Sbjct: 334 RRAGDLVLQYGWKVERHIVDGDFIIFNRQPSLHKESMMGHRVRVMPYSTFRLNLSVTSPY 393
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAEV +L MVP IVSPQ N P+MGIVQDTL G RD
Sbjct: 394 NADFDGDEMNLHVPQSEETRAEVNQLCMVPLNIVSPQRNSPLMGIVQDTLCGIYKICRRD 453
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPD-VNLVR 514
FL + M++LL V WDG+IP PA++KP+PLWTGKQ+ SL++P +NLV+
Sbjct: 454 VFLNHEQVMNILLWVPEWDGIIPQPAVLKPKPLWTGKQIVSLVIPSGLNLVK 505
[209][TOP]
>UniRef100_Q7Q3C6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7Q3C6_ANOGA
Length = 1878
Score = 236 bits (603), Expect = 6e-61
Identities = 106/177 (59%), Positives = 143/177 (80%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 426 SDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 485
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAE+ + + PR I++PQ NKPVMGIVQDTL T RD F+
Sbjct: 486 FDGDEMNLHVPQSMETRAEIENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFI 545
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
++ M+LL+ + WDG +P PAI+KP+PLWTGKQ+F+L++P +VN++R +THPD+
Sbjct: 546 EKEQMMNLLMFLPTWDGKMPQPAILKPKPLWTGKQIFTLIIPGNVNMIRTHSTHPDE 602
[210][TOP]
>UniRef100_Q5CUJ2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cryptosporidium
parvum Iowa II RepID=Q5CUJ2_CRYPV
Length = 1902
Score = 236 bits (603), Expect = 6e-61
Identities = 110/163 (67%), Positives = 136/163 (83%)
Frame = +2
Query: 5 NRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYN 184
N ++ L+ G+KV RH+ N D ++FNRQPSLHKMSIMGHR+K++PYSTFRLNLSVTSPYN
Sbjct: 423 NNSNNILQYGWKVERHMKNDDLVLFNRQPSLHKMSIMGHRVKILPYSTFRLNLSVTSPYN 482
Query: 185 ADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDT 364
ADFDGDEMNLH+ Q+H TR+E+ LMMVPR IVSPQGNKPV+GIVQD+LLG L T + T
Sbjct: 483 ADFDGDEMNLHLAQSHETRSEIKNLMMVPRQIVSPQGNKPVIGIVQDSLLGIFLLTRKST 542
Query: 365 FLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLL 493
FL RD + LLL + W+G IPPPAI++P+PLWTGKQ+ ++LL
Sbjct: 543 FLTRDKFLQLLLCIPYWNGNIPPPAILRPQPLWTGKQIITVLL 585
[211][TOP]
>UniRef100_Q23699 DNA-directed RNA polymerase (Fragment) n=1 Tax=Crassostrea gigas
RepID=Q23699_CRAGI
Length = 1340
Score = 236 bits (603), Expect = 6e-61
Identities = 110/177 (62%), Positives = 142/177 (80%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+IGYKV RH+ + D+IVFNRQP+LHKMS+M H++KV+P+STFRLNLSVT+PYNAD
Sbjct: 347 SDLHLQIGYKVERHMQDNDYIVFNRQPTLHKMSMMCHKVKVLPWSTFRLNLSVTTPYNAD 406
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLH+PQ+ T+AE+ L +VPR I++PQ N+PVMGIVQDTL T RD FL
Sbjct: 407 FDGDEMNLHLPQSLETKAEISNLALVPRMIITPQANRPVMGIVQDTLTAVRKMTKRDVFL 466
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPD-VNLVRYCNTHPDD 538
R M+LL+ + WDG +P PAI+KP+PLWTGKQLFSL++P N +R +THPD+
Sbjct: 467 DRGQVMNLLMFLPRWDGHVPQPAILKPKPLWTGKQLFSLVIPGRTNCIRTHSTHPDE 523
[212][TOP]
>UniRef100_Q2PYR4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhopalomyces elegans
RepID=Q2PYR4_9FUNG
Length = 792
Score = 236 bits (603), Expect = 6e-61
Identities = 107/165 (64%), Positives = 136/165 (82%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
R D+ L+ G++V RH+ +GD ++FNRQPSLHKMS+MGHR++VMP+ TFRLNLSVT+PY
Sbjct: 350 RRGGDIPLQYGWRVERHLVDGDLVIFNRQPSLHKMSMMGHRVRVMPHHTFRLNLSVTTPY 409
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMN+HVPQ+ ++AE+ E+ MVPR IVSPQ N PVMGIVQDTL G +FT RD
Sbjct: 410 NADFDGDEMNMHVPQSLESKAEIQEICMVPRQIVSPQKNAPVMGIVQDTLCGVNIFTRRD 469
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP 496
TFL R TM++L+ V WDG IP PAI+KP+PLWTGKQ+ +L++P
Sbjct: 470 TFLSRQQTMNILMWVPNWDGRIPAPAILKPKPLWTGKQMLTLIIP 514
[213][TOP]
>UniRef100_Q2HDK0 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2HDK0_CHAGB
Length = 1756
Score = 236 bits (603), Expect = 6e-61
Identities = 112/178 (62%), Positives = 136/178 (76%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
R +QLE G+KV RH+ +GD+I+FNRQPSLHK S+MGHR++VMPYSTFRLNLSVTSPY
Sbjct: 432 RRATGIQLEYGWKVERHLLDGDYIIFNRQPSLHKESMMGHRVRVMPYSTFRLNLSVTSPY 491
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQT TRAEV EL MVP IVSPQ N P+MGIVQDTL G RD
Sbjct: 492 NADFDGDEMNLHVPQTEETRAEVKELCMVPLNIVSPQRNGPLMGIVQDTLAGVYKLCRRD 551
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPD 535
FL ++ M+++L V WDG+IP PAI KP P WTGKQ+ S+++P++ + + PD
Sbjct: 552 VFLTKEEVMNIMLWVPDWDGIIPLPAIFKPRPRWTGKQIISMVIPNIINIHMPSDQPD 609
[214][TOP]
>UniRef100_A1YIB7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus mosseae
RepID=A1YIB7_GLOMO
Length = 1054
Score = 236 bits (603), Expect = 6e-61
Identities = 114/177 (64%), Positives = 141/177 (79%), Gaps = 4/177 (2%)
Frame = +2
Query: 17 VQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFD 196
V+L+ G+KV RHI NGD I+FNRQPSLHKMS+MGH+++VMP+STFRLNLSVTSPYNADFD
Sbjct: 375 VRLQNGWKVERHINNGDVIIFNRQPSLHKMSMMGHKVRVMPFSTFRLNLSVTSPYNADFD 434
Query: 197 GDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRR 376
GDEMN+HVPQ+ T+AE+ E+ MVP+ IVSPQ NKPVMGIVQDTL FT RD FL +
Sbjct: 435 GDEMNMHVPQSVETKAEIKEICMVPKQIVSPQSNKPVMGIVQDTLCAIRKFTKRDCFLSK 494
Query: 377 DVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP----DVNLVRYCNTHPD 535
D+ M++L+ V+ WDG IP P I+KP PLWTGKQ+ S+++P NL +THPD
Sbjct: 495 DLVMNILMWVKDWDGKIPIPCILKPIPLWTGKQILSMIIPKGINSXNLRH--STHPD 549
[215][TOP]
>UniRef100_B4NDK9 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4NDK9_DROWI
Length = 1890
Score = 236 bits (602), Expect = 8e-61
Identities = 107/177 (60%), Positives = 141/177 (79%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 428 SDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 487
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV + + PR I++PQ NKPVMGIVQDTL T RD F+
Sbjct: 488 FDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFI 547
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R+ M+LL+ + WDG +P P I+KP P+WTGKQ+FSL++P +VN++R +THPD+
Sbjct: 548 TREQMMNLLMFLPTWDGKMPQPCILKPRPMWTGKQIFSLIIPGNVNMIRTHSTHPDE 604
[216][TOP]
>UniRef100_Q0PQ14 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cladonia caroliniana
RepID=Q0PQ14_9LECA
Length = 1016
Score = 236 bits (602), Expect = 8e-61
Identities = 114/175 (65%), Positives = 137/175 (78%), Gaps = 1/175 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ ++ L+ G+KV RHI +GDFI+FNRQPSLHK S+MGHR++VMPYSTFRLNLSVTSPY
Sbjct: 354 KRAGEIPLQYGWKVERHIVDGDFIIFNRQPSLHKESMMGHRVRVMPYSTFRLNLSVTSPY 413
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAEV +L MVP IV PQ N P+MGIVQDTL G RD
Sbjct: 414 NADFDGDEMNLHVPQSEETRAEVSQLCMVPLNIVPPQRNGPLMGIVQDTLCGIYKMCRRD 473
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCN 523
FL ++ M++LL V WDGVIP PAI+KP PLWTGKQ+ SL++P +NL+R N
Sbjct: 474 VFLTKEQVMNILLWVPDWDGVIPQPAIVKPRPLWTGKQILSLVMPVGLNLLRVSN 528
[217][TOP]
>UniRef100_Q0PQ06 DNA-directed RNA polymerase (Fragment) n=1 Tax=Roccella fuciformis
RepID=Q0PQ06_9PEZI
Length = 1017
Score = 236 bits (602), Expect = 8e-61
Identities = 114/168 (67%), Positives = 136/168 (80%), Gaps = 1/168 (0%)
Frame = +2
Query: 14 DVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADF 193
++QL++G+KV RHI +GD+I+FNRQPSLHK S MGHR++VMPYSTFRLNLSVTSPYNADF
Sbjct: 362 NIQLQVGWKVERHIVDGDYIIFNRQPSLHKESRMGHRVRVMPYSTFRLNLSVTSPYNADF 421
Query: 194 DGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLR 373
DGDEMNLHVPQ+ TRAEVM L MVP IVSPQ N P+MGIVQDTL G RD FL
Sbjct: 422 DGDEMNLHVPQSEETRAEVMNLCMVPLNIVSPQRNGPLMGIVQDTLCGIYKICRRDVFLT 481
Query: 374 RDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSL-LLPDVNLVR 514
++ M++LL V WDGV+P PAI+KP P WTGKQ+ S+ L+P +NLVR
Sbjct: 482 QEQVMNVLLWVPSWDGVLPQPAIVKPSPRWTGKQIISMALVPGLNLVR 529
[218][TOP]
>UniRef100_A4RMP1 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
RepID=A4RMP1_MAGGR
Length = 1757
Score = 236 bits (602), Expect = 8e-61
Identities = 110/166 (66%), Positives = 130/166 (78%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+NR QLE G KV RH+ GD+I+FNRQPSLHK S+MGH+++VMPYSTFRLNLSVTSPY
Sbjct: 433 KNRGSTQLEYGQKVERHLLTGDYIIFNRQPSLHKESMMGHQVRVMPYSTFRLNLSVTSPY 492
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQT TRAEV EL MVP IVSPQ N P+MGIVQDTL G RD
Sbjct: 493 NADFDGDEMNLHVPQTEETRAEVKELCMVPLNIVSPQRNSPLMGIVQDTLAGTYKLCRRD 552
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPD 499
FL ++ M ++L V WDG+IP PAI++P P WTGKQ+ S+++PD
Sbjct: 553 VFLTKEAVMDIMLWVPDWDGIIPQPAILRPRPRWTGKQIISMVIPD 598
[219][TOP]
>UniRef100_O77375 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
RepID=O77375_PLAF7
Length = 2457
Score = 236 bits (601), Expect = 1e-60
Identities = 114/171 (66%), Positives = 139/171 (81%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
R ++ +LE GYKV RH+T+ D+I+FNRQPSLHKMSIMGH+ K++PYSTFRLNLSVTSPY
Sbjct: 452 RRNSEKELEYGYKVERHMTDEDYILFNRQPSLHKMSIMGHKAKILPYSTFRLNLSVTSPY 511
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLH+ Q+H TR+E+ LM+V R IVSPQGNKPVMGIVQD+LL FT RD
Sbjct: 512 NADFDGDEMNLHLAQSHETRSEIKHLMIVQRQIVSPQGNKPVMGIVQDSLLAIRKFTRRD 571
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLL--PDVNL 508
FL ++ MSLL+ + W+ VIP PAIIKP LWTGKQ+FS+LL D+N+
Sbjct: 572 NFLTKEEVMSLLIWIPYWNHVIPTPAIIKPRALWTGKQIFSMLLQFDDMNI 622
[220][TOP]
>UniRef100_B0XAQ9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
RepID=B0XAQ9_CULQU
Length = 1874
Score = 236 bits (601), Expect = 1e-60
Identities = 106/177 (59%), Positives = 142/177 (80%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 426 SDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 485
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAE+ + + PR I++PQ NKPVMGIVQDTL T RD FL
Sbjct: 486 FDGDEMNLHVPQSMETRAEIENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFL 545
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
++ M+LL+ + WDG +P P I+KP+PLWTGKQ+F+L++P +VN++R +THPD+
Sbjct: 546 EKEQMMNLLMFLPTWDGKMPQPCILKPKPLWTGKQIFTLIIPGNVNMIRTHSTHPDE 602
[221][TOP]
>UniRef100_A7EKT1 DNA-directed RNA polymerase n=2 Tax=Sclerotinia sclerotiorum
RepID=A7EKT1_SCLS1
Length = 1746
Score = 236 bits (601), Expect = 1e-60
Identities = 112/162 (69%), Positives = 131/162 (80%)
Frame = +2
Query: 17 VQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFD 196
+ LE G+KV RHI +GDFI+FNRQPSLHK S+MGHR++VMPYSTFRLNLSVTSPYNADFD
Sbjct: 437 ISLEYGWKVERHIVDGDFIIFNRQPSLHKESMMGHRVRVMPYSTFRLNLSVTSPYNADFD 496
Query: 197 GDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRR 376
GDEMNLHVPQT+ TRAEVM L MVP IVSPQ N P+MGIVQDTL G RD F+ +
Sbjct: 497 GDEMNLHVPQTYETRAEVMNLCMVPLNIVSPQRNGPLMGIVQDTLAGVYKICRRDVFITK 556
Query: 377 DVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDV 502
+ M++LL V WDGVIP PAI+KP P WTGKQ+ SL++P +
Sbjct: 557 EHLMNILLWVPDWDGVIPQPAILKPRPRWTGKQIVSLIIPKI 598
[222][TOP]
>UniRef100_A6SI63 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10
RepID=A6SI63_BOTFB
Length = 1742
Score = 236 bits (601), Expect = 1e-60
Identities = 112/162 (69%), Positives = 131/162 (80%)
Frame = +2
Query: 17 VQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFD 196
+ LE G+KV RHI +GDFI+FNRQPSLHK S+MGHR++VMPYSTFRLNLSVTSPYNADFD
Sbjct: 437 ISLEYGWKVERHIVDGDFIIFNRQPSLHKESMMGHRVRVMPYSTFRLNLSVTSPYNADFD 496
Query: 197 GDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRR 376
GDEMNLHVPQT+ TRAEVM L MVP IVSPQ N P+MGIVQDTL G RD F+ +
Sbjct: 497 GDEMNLHVPQTYETRAEVMNLCMVPLNIVSPQRNGPLMGIVQDTLAGVYKICRRDVFITK 556
Query: 377 DVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDV 502
+ M++LL V WDGVIP PAI+KP P WTGKQ+ SL++P +
Sbjct: 557 EHLMNILLWVPDWDGVIPQPAILKPRPRWTGKQIVSLIIPKI 598
[223][TOP]
>UniRef100_P14248 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Plasmodium
falciparum CDC/Honduras RepID=RPB1_PLAFD
Length = 2452
Score = 236 bits (601), Expect = 1e-60
Identities = 114/171 (66%), Positives = 139/171 (81%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
R ++ +LE GYKV RH+T+ D+I+FNRQPSLHKMSIMGH+ K++PYSTFRLNLSVTSPY
Sbjct: 452 RRNSEKELEYGYKVERHMTDEDYILFNRQPSLHKMSIMGHKAKILPYSTFRLNLSVTSPY 511
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLH+ Q+H TR+E+ LM+V R IVSPQGNKPVMGIVQD+LL FT RD
Sbjct: 512 NADFDGDEMNLHLAQSHETRSEIKHLMIVQRQIVSPQGNKPVMGIVQDSLLAIRKFTRRD 571
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLL--PDVNL 508
FL ++ MSLL+ + W+ VIP PAIIKP LWTGKQ+FS+LL D+N+
Sbjct: 572 NFLTKEEVMSLLIWIPYWNHVIPTPAIIKPRALWTGKQIFSMLLQFDDMNI 622
[224][TOP]
>UniRef100_Q0PQ03 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pertusaria dactylina
RepID=Q0PQ03_9LECA
Length = 1015
Score = 235 bits (600), Expect = 1e-60
Identities = 113/172 (65%), Positives = 137/172 (79%), Gaps = 1/172 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ ++ L+ G+KV RHI +GD+I+FNRQPSLHK S+MGHR++VMPYSTFRLNLSVTSPY
Sbjct: 354 KRAGEISLQYGWKVERHIVDGDYIIFNRQPSLHKESMMGHRVRVMPYSTFRLNLSVTSPY 413
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAEV +L MVP IVSPQ N P+MGIVQDTL G RD
Sbjct: 414 NADFDGDEMNLHVPQSEETRAEVSQLCMVPLNIVSPQRNAPLMGIVQDTLCGIYKICRRD 473
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPD-VNLVR 514
FL ++ M++LL V WDGVIP PAIIKP P WTGKQ+ SL++P+ +NL+R
Sbjct: 474 VFLTKEQIMNVLLWVPDWDGVIPQPAIIKPRPKWTGKQIISLVIPEGLNLIR 525
[225][TOP]
>UniRef100_Q0PQ01 DNA-directed RNA polymerase (Fragment) n=1 Tax=Bacidia schweinitzii
RepID=Q0PQ01_9LECA
Length = 1016
Score = 235 bits (600), Expect = 1e-60
Identities = 115/172 (66%), Positives = 136/172 (79%), Gaps = 1/172 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ ++ L+ G+KV RHI +GD+I+FNRQPSLHK S+MGHR++VMPYSTFRLNLSVTSPY
Sbjct: 354 KRAGEISLQYGWKVERHIIDGDYIIFNRQPSLHKESMMGHRVRVMPYSTFRLNLSVTSPY 413
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAEV +L MVP +VSPQ N P+MGIVQDTL G RD
Sbjct: 414 NADFDGDEMNLHVPQSEETRAEVNQLCMVPLNVVSPQRNGPLMGIVQDTLCGIYKICRRD 473
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVR 514
FL RD M++LL V WDGVIP PAIIKP +WTGKQL SL++P +NLVR
Sbjct: 474 VFLSRDQVMNILLWVPDWDGVIPQPAIIKPRAMWTGKQLISLVVPTGLNLVR 525
[226][TOP]
>UniRef100_A7J592 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pyxine subcinerea
RepID=A7J592_9LECA
Length = 1015
Score = 235 bits (600), Expect = 1e-60
Identities = 110/165 (66%), Positives = 132/165 (80%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ D+ L+ G+KV RHI +GD+I+FNRQPSLHK S+MGHR++VMPYSTFRLNLSVTSPY
Sbjct: 353 KRAGDISLQYGWKVERHIVDGDYIIFNRQPSLHKESMMGHRVRVMPYSTFRLNLSVTSPY 412
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAEV +L MVP IVSPQ N P+MGIVQDTL G RD
Sbjct: 413 NADFDGDEMNLHVPQSEETRAEVNQLCMVPLNIVSPQRNGPLMGIVQDTLCGIYKICRRD 472
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP 496
FL +D M++LL V WDG+IP PAI+KP P+WTGKQ+ SL++P
Sbjct: 473 VFLNQDQVMNILLWVPDWDGIIPQPAILKPSPMWTGKQIISLVIP 517
[227][TOP]
>UniRef100_B6AG69 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AG69_9CRYT
Length = 1927
Score = 235 bits (599), Expect = 2e-60
Identities = 107/163 (65%), Positives = 137/163 (84%)
Frame = +2
Query: 5 NRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYN 184
N A+ L+ G+KV RH+ N D ++FNRQPSLHKMSIMGHR+K++PYSTFRLNLSVTSPYN
Sbjct: 416 NNANCVLQYGWKVERHMKNDDLVLFNRQPSLHKMSIMGHRVKILPYSTFRLNLSVTSPYN 475
Query: 185 ADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDT 364
ADFDGDEMNLH+ Q++ TR+E+ LMMVP+ IVSPQGN+PV+GIVQD+LLG L T + T
Sbjct: 476 ADFDGDEMNLHLAQSYETRSEIKHLMMVPKQIVSPQGNRPVIGIVQDSLLGLFLLTRKST 535
Query: 365 FLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLL 493
FL +D + LLL + W+G+IPPPAI++P+PLWTGKQ+ ++LL
Sbjct: 536 FLTKDRFLQLLLCIPYWNGIIPPPAILRPQPLWTGKQIITVLL 578
[228][TOP]
>UniRef100_B4R348 DNA-directed RNA polymerase n=1 Tax=Drosophila simulans
RepID=B4R348_DROSI
Length = 1150
Score = 235 bits (599), Expect = 2e-60
Identities = 107/177 (60%), Positives = 140/177 (79%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 428 SDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 487
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV + + PR I++PQ NKPVMGIVQDTL T RD F+
Sbjct: 488 FDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFI 547
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R+ M+LL+ + WD +P P I+KP PLWTGKQ+FSL++P +VN++R +THPD+
Sbjct: 548 TREQVMNLLMFLPTWDAKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHSTHPDE 604
[229][TOP]
>UniRef100_B4IK28 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia
RepID=B4IK28_DROSE
Length = 1887
Score = 235 bits (599), Expect = 2e-60
Identities = 107/177 (60%), Positives = 140/177 (79%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 428 SDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 487
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV + + PR I++PQ NKPVMGIVQDTL T RD F+
Sbjct: 488 FDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFI 547
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R+ M+LL+ + WD +P P I+KP PLWTGKQ+FSL++P +VN++R +THPD+
Sbjct: 548 TREQVMNLLMFLPTWDAKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHSTHPDE 604
[230][TOP]
>UniRef100_A9UNH9 DNA-directed RNA polymerase n=1 Tax=Drosophila melanogaster
RepID=A9UNH9_DROME
Length = 1887
Score = 235 bits (599), Expect = 2e-60
Identities = 107/177 (60%), Positives = 140/177 (79%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 428 SDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 487
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV + + PR I++PQ NKPVMGIVQDTL T RD F+
Sbjct: 488 FDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFI 547
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R+ M+LL+ + WD +P P I+KP PLWTGKQ+FSL++P +VN++R +THPD+
Sbjct: 548 TREQVMNLLMFLPTWDAKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHSTHPDE 604
[231][TOP]
>UniRef100_Q7SDN0 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
RepID=Q7SDN0_NEUCR
Length = 1752
Score = 235 bits (599), Expect = 2e-60
Identities = 114/179 (63%), Positives = 136/179 (75%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
R +QLE G+KV RH+ +GD+I+FNRQPSLHK S+MGHR+KVMPYSTFRLNLSVTSPY
Sbjct: 433 RRTGPLQLEYGWKVERHLIDGDYIIFNRQPSLHKESMMGHRVKVMPYSTFRLNLSVTSPY 492
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQT TRAEV EL MVP IVSPQ N P+MGIVQDTL G RD
Sbjct: 493 NADFDGDEMNLHVPQTEETRAEVKELCMVPLNIVSPQRNGPLMGIVQDTLAGAYKLCRRD 552
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDD 538
FL ++ M+++L V WDG+IP PAI+KP P WTGKQ+ S+++P ++ N DD
Sbjct: 553 VFLTKEEVMNIMLWVPEWDGIIPVPAILKPRPRWTGKQIISMVVP--KIINLKNIDEDD 609
[232][TOP]
>UniRef100_Q2PYR8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus mosseae
RepID=Q2PYR8_GLOMO
Length = 585
Score = 235 bits (599), Expect = 2e-60
Identities = 112/176 (63%), Positives = 143/176 (81%), Gaps = 3/176 (1%)
Frame = +2
Query: 17 VQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFD 196
V+L+ G+KV RHI NGD I+FNRQPSLHKMS+MGH+++VMP+STFRLNLSVTSPYNADFD
Sbjct: 189 VRLQNGWKVERHINNGDVIIFNRQPSLHKMSMMGHKVRVMPFSTFRLNLSVTSPYNADFD 248
Query: 197 GDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRR 376
GDEMN+HVPQ+ T+AE+ E+ MVP+ IVSPQ NKPVMGIVQDTL FT RD F +
Sbjct: 249 GDEMNMHVPQSVETKAEIKEICMVPKQIVSPQSNKPVMGIVQDTLCAIRKFTKRDCFXSK 308
Query: 377 DVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP---DVNLVRYCNTHPD 535
D+ M++L+ V+ WDG IP P I+KP PLWTGKQ+ S+++P + + +R+ +THPD
Sbjct: 309 DLVMNILMWVKDWDGKIPIPCILKPIPLWTGKQILSMIIPKGINSDNLRH-STHPD 363
[233][TOP]
>UniRef100_B2AA31 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
RepID=B2AA31_PODAN
Length = 1748
Score = 235 bits (599), Expect = 2e-60
Identities = 112/162 (69%), Positives = 131/162 (80%)
Frame = +2
Query: 17 VQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFD 196
+QLE G+KV RH+ +GDFI+FNRQPSLHK S+MGHR++VMPYSTFRLNLSVTSPYNADFD
Sbjct: 436 LQLEYGWKVERHLIDGDFIIFNRQPSLHKESMMGHRVRVMPYSTFRLNLSVTSPYNADFD 495
Query: 197 GDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRR 376
GDEMNLHVPQT TRAEV EL MVP IVSPQ N P+MGIVQDTL G T RDTFL +
Sbjct: 496 GDEMNLHVPQTEETRAEVKELCMVPLNIVSPQRNGPLMGIVQDTLAGVYKLTRRDTFLTK 555
Query: 377 DVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDV 502
+ M +++ V WDGVIP PAI KP P WTGKQ+ S+++P +
Sbjct: 556 EQVMDVMMWVPDWDGVIPLPAIWKPRPRWTGKQIISMVIPSI 597
[234][TOP]
>UniRef100_P04052 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Drosophila
melanogaster RepID=RPB1_DROME
Length = 1887
Score = 235 bits (599), Expect = 2e-60
Identities = 107/177 (60%), Positives = 140/177 (79%), Gaps = 1/177 (0%)
Frame = +2
Query: 11 ADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNAD 190
+D+ L+ GYKV RH+ + D ++FNRQP+LHKMS+MGHR+KV+P+STFR+NLS TSPYNAD
Sbjct: 428 SDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSPYNAD 487
Query: 191 FDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFL 370
FDGDEMNLHVPQ+ TRAEV + + PR I++PQ NKPVMGIVQDTL T RD F+
Sbjct: 488 FDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFI 547
Query: 371 RRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
R+ M+LL+ + WD +P P I+KP PLWTGKQ+FSL++P +VN++R +THPD+
Sbjct: 548 TREQVMNLLMFLPTWDAKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHSTHPDE 604
[235][TOP]
>UniRef100_A6GVF8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus mosseae
RepID=A6GVF8_GLOMO
Length = 496
Score = 234 bits (598), Expect = 2e-60
Identities = 112/176 (63%), Positives = 143/176 (81%), Gaps = 3/176 (1%)
Frame = +2
Query: 17 VQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFD 196
V+L+ G+KV RHI NGD I+FNRQPSLHKMS+MGH+++VMP+STFRLNLSVTSPYNADFD
Sbjct: 180 VRLQNGWKVERHINNGDVIIFNRQPSLHKMSMMGHKVRVMPFSTFRLNLSVTSPYNADFD 239
Query: 197 GDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRR 376
GDEMN+HVPQ+ T+AE+ E+ MVP+ IVSPQ NKPVMGIVQDTL FT RD FL +
Sbjct: 240 GDEMNMHVPQSVETKAEIKEICMVPKQIVSPQSNKPVMGIVQDTLCAIRKFTKRDCFLSK 299
Query: 377 DVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP---DVNLVRYCNTHPD 535
D+ ++L+ V+ WDG IP P I+KP PLWTGKQ+ S+++P + + +R+ +THPD
Sbjct: 300 DLVTNILMWVKDWDGKIPIPCILKPIPLWTGKQILSMIIPKGINSDNLRH-STHPD 354
[236][TOP]
>UniRef100_Q17085 DNA-directed RNA polymerase (Fragment) n=1 Tax=Artemia salina
RepID=Q17085_ARTSA
Length = 1341
Score = 234 bits (597), Expect = 3e-60
Identities = 106/176 (60%), Positives = 142/176 (80%), Gaps = 1/176 (0%)
Frame = +2
Query: 14 DVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADF 193
D+ L+ GYKV RHI +GD ++FNRQP+LHKMS+MGHR++V+P+STFR+NLS T+PYNADF
Sbjct: 349 DLHLQFGYKVERHIRDGDLVIFNRQPTLHKMSMMGHRVRVLPWSTFRMNLSCTTPYNADF 408
Query: 194 DGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLR 373
DGDEMNLHV Q+ TRAE+ + + PR I++PQ N+PVMGIVQDTL T RD FL
Sbjct: 409 DGDEMNLHVAQSLETRAELENIHITPRQIITPQANRPVMGIVQDTLCAVRKMTKRDVFLE 468
Query: 374 RDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHPDD 538
++ M+LL+++ WDG +P PAI+KP+PLWTGKQLF+L++P VN+++ +THPDD
Sbjct: 469 KEQMMTLLMYLPTWDGKLPQPAILKPKPLWTGKQLFTLIIPGKVNMMKTHSTHPDD 524
[237][TOP]
>UniRef100_Q0PQ02 DNA-directed RNA polymerase (Fragment) n=1 Tax=Lecanora hybocarpa
RepID=Q0PQ02_9LECA
Length = 1016
Score = 234 bits (597), Expect = 3e-60
Identities = 112/172 (65%), Positives = 137/172 (79%), Gaps = 1/172 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ ++ L+ G+KV RHI +GD+I+FNRQPSLHK S+MGHR++VMPYSTFRLNLSVTSPY
Sbjct: 354 KRAGEISLQYGWKVERHIVDGDYIIFNRQPSLHKESMMGHRVRVMPYSTFRLNLSVTSPY 413
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAEV +L MVP IVSPQ N P+MGIVQDTL G RD
Sbjct: 414 NADFDGDEMNLHVPQSEETRAEVNQLCMVPLNIVSPQRNGPLMGIVQDTLCGIYKMCRRD 473
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVR 514
FL ++ M++LL V WDGVIP PAI+KP P+WTGKQ+ SL++P +NL+R
Sbjct: 474 VFLTKEQVMNILLWVPDWDGVIPQPAILKPRPMWTGKQILSLVIPAGLNLLR 525
[238][TOP]
>UniRef100_A7J5B2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Gyalideopsis
vulgaris RepID=A7J5B2_9LECA
Length = 1015
Score = 234 bits (597), Expect = 3e-60
Identities = 114/172 (66%), Positives = 135/172 (78%), Gaps = 1/172 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ D+ L G+KV RHI +GDFI+FNRQPSLHK S+MGHR++VMPYSTFRLNLSVTSPY
Sbjct: 353 KRAGDINLAYGWKVERHIVDGDFIIFNRQPSLHKESMMGHRVRVMPYSTFRLNLSVTSPY 412
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAEV +L MVP IVSPQ N P+MGIVQDTL G RD
Sbjct: 413 NADFDGDEMNLHVPQSEETRAEVNQLCMVPLNIVSPQRNGPLMGIVQDTLCGIYKMCRRD 472
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLL-PDVNLVR 514
FL ++ M++LL V WDGVIP PAI KP+PLWTGKQ+ L++ P +NL+R
Sbjct: 473 VFLTKERVMNILLWVPDWDGVIPQPAIFKPKPLWTGKQILGLVIPPGLNLLR 524
[239][TOP]
>UniRef100_Q67GI4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Gregarina
niphandrodes RepID=Q67GI4_GRENI
Length = 1020
Score = 234 bits (596), Expect = 4e-60
Identities = 109/163 (66%), Positives = 133/163 (81%)
Frame = +2
Query: 5 NRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYN 184
N A +QLE GYKV RH+ +GD+++FNRQPSLHKMSIMGHR+KV+P+STFR NLSVT+PYN
Sbjct: 345 NPAVLQLEPGYKVERHVRDGDYVLFNRQPSLHKMSIMGHRVKVLPWSTFRCNLSVTAPYN 404
Query: 185 ADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDT 364
ADFDGDEMNLH+ Q+ TRAE+ +L +VP+ IVSPQGNKPVMGIVQD+LLG T RDT
Sbjct: 405 ADFDGDEMNLHLAQSQETRAEIKQLCLVPKQIVSPQGNKPVMGIVQDSLLGLAKMTSRDT 464
Query: 365 FLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLL 493
F+ R + M L L V WDG++P P I KPE LWTGKQL +++L
Sbjct: 465 FIDRPIMMGLCLWVRDWDGILPAPVIYKPEKLWTGKQLITMIL 507
[240][TOP]
>UniRef100_Q0PQ00 DNA-directed RNA polymerase (Fragment) n=1 Tax=Umbilicaria
mammulata RepID=Q0PQ00_9LECA
Length = 1014
Score = 234 bits (596), Expect = 4e-60
Identities = 112/172 (65%), Positives = 136/172 (79%), Gaps = 1/172 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ ++ L+ G+KV RHI +GD+I+FNRQPSLHK S+MGHR++V+PYSTFRLNLSVTSPY
Sbjct: 354 KRAGEISLQYGWKVERHIVDGDYIIFNRQPSLHKESMMGHRVRVVPYSTFRLNLSVTSPY 413
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAE+ +L MVP IVSPQ N P+MGIVQDTL G RD
Sbjct: 414 NADFDGDEMNLHVPQSEETRAEINQLCMVPLNIVSPQRNGPLMGIVQDTLCGIYKMCRRD 473
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVR 514
FL +D M++LL V WDGVIP PAI+KP P WTGKQL SL++P +NL+R
Sbjct: 474 VFLTKDQVMNILLWVPDWDGVIPQPAILKPRPKWTGKQLISLVIPAGLNLIR 525
[241][TOP]
>UniRef100_Q6CBQ3 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CBQ3_YARLI
Length = 1750
Score = 233 bits (595), Expect = 5e-60
Identities = 109/178 (61%), Positives = 140/178 (78%), Gaps = 1/178 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ D+ L+ G+KV RH+ + D ++FNRQPSLHKMS+M HR++VMPYSTFRLNLSVTSPY
Sbjct: 424 KRAGDIALQYGWKVERHLMDNDPVLFNRQPSLHKMSMMAHRVRVMPYSTFRLNLSVTSPY 483
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAE+ +L MVP IVSPQ NKPVMGIVQDTL G T RD
Sbjct: 484 NADFDGDEMNLHVPQSEETRAELSQLCMVPLQIVSPQSNKPVMGIVQDTLCGVRKMTIRD 543
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVRYCNTHP 532
+F+ D+ M++L + WDGV+P PAI+KP+PLWTGKQ+ S+ +P ++L R+ + +P
Sbjct: 544 SFIDYDMVMNILFWIPNWDGVVPTPAILKPKPLWTGKQMVSMCIPKGIHLQRFDDQNP 601
[242][TOP]
>UniRef100_C6F1F7 DNA-directed RNA polymerase n=1 Tax=Plasmodium gallinaceum
RepID=C6F1F7_PLAGA
Length = 2200
Score = 233 bits (594), Expect = 6e-60
Identities = 113/170 (66%), Positives = 139/170 (81%), Gaps = 2/170 (1%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
R ++ +LE GYKV RH+T+ D+I+FNRQPSLHKMSIMGH+ K++PYSTFRLNL+VTSPY
Sbjct: 452 RKSSEKELEYGYKVERHMTDEDYILFNRQPSLHKMSIMGHKAKILPYSTFRLNLAVTSPY 511
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLH+ Q+H TR+E+ LM+V + IVSPQGNKPVMGIVQD+LL FT RD
Sbjct: 512 NADFDGDEMNLHLAQSHETRSEIKHLMIVQKQIVSPQGNKPVMGIVQDSLLAIRKFTRRD 571
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLL--PDVN 505
FL ++ MSLL+ + W+ VIP PAIIKP+ LWTGKQ+FS+LL DVN
Sbjct: 572 NFLCKEEVMSLLIWIPYWNHVIPTPAIIKPKALWTGKQIFSMLLQFDDVN 621
[243][TOP]
>UniRef100_A7J5B1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Teloschistes exilis
RepID=A7J5B1_9LECA
Length = 1003
Score = 233 bits (594), Expect = 6e-60
Identities = 111/172 (64%), Positives = 136/172 (79%), Gaps = 1/172 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ ++ L+ G+KV RHI +GDFI+FNRQPS HK S+MGHR++VMPYSTFRLNLSVTSPY
Sbjct: 343 KRAGEISLQYGWKVERHIVDGDFIIFNRQPSXHKESMMGHRVRVMPYSTFRLNLSVTSPY 402
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAEV +L MVP IVSPQ N P+MGIVQDTL G RD
Sbjct: 403 NADFDGDEMNLHVPQSEETRAEVNQLCMVPLNIVSPQRNSPLMGIVQDTLCGIYKICRRD 462
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVR 514
FL ++ M++LL V WDG+IP PA++KP PLWTGKQ+ SL++P +NLV+
Sbjct: 463 VFLNQEQVMNILLWVPEWDGIIPQPAVLKPTPLWTGKQIVSLVIPAGLNLVK 514
[244][TOP]
>UniRef100_A7J593 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pleopsidium gobiense
RepID=A7J593_9LECA
Length = 1017
Score = 233 bits (594), Expect = 6e-60
Identities = 111/172 (64%), Positives = 136/172 (79%), Gaps = 1/172 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ ++ L+ G+KV RHI +GD+I+FNRQPSLHK S+MGHR++VMPYSTFRLNLSVTSPY
Sbjct: 357 KRAGEISLQYGWKVERHIVDGDYIIFNRQPSLHKESMMGHRVRVMPYSTFRLNLSVTSPY 416
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAE+ +L MVP IVSPQ N P+MGIVQDTL G RD
Sbjct: 417 NADFDGDEMNLHVPQSEETRAEINQLCMVPLNIVSPQRNGPLMGIVQDTLCGIYKMCRRD 476
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVR 514
FL ++ M++LL V WDGVIP PAI+KP P WTGKQ+ SL++P +NL+R
Sbjct: 477 VFLTKEQVMNILLWVPDWDGVIPQPAILKPRPTWTGKQIVSLVIPKGLNLIR 528
[245][TOP]
>UniRef100_B3L428 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
RepID=B3L428_PLAKH
Length = 2353
Score = 233 bits (593), Expect = 8e-60
Identities = 111/171 (64%), Positives = 139/171 (81%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
R ++ +LE GYKV RH+T+ D+I+FNRQPSLHKMSIMGH+ K++PYSTFRLNL+VTSPY
Sbjct: 454 RKNSERELEYGYKVERHMTDEDYILFNRQPSLHKMSIMGHKAKILPYSTFRLNLAVTSPY 513
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLH+ Q+H TR+E+ LM+V + IVSPQGNKPVMGIVQD+LL FT RD
Sbjct: 514 NADFDGDEMNLHLAQSHETRSEIKHLMIVQKQIVSPQGNKPVMGIVQDSLLAIRKFTRRD 573
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVR 514
FL ++ MSLL+ + W+ VIP PAI+KP+ LWTGKQ+FS+LL +L R
Sbjct: 574 NFLTKEEVMSLLIWIPYWNHVIPTPAIMKPKALWTGKQIFSMLLQFEDLER 624
[246][TOP]
>UniRef100_A5K7P4 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
RepID=A5K7P4_PLAVI
Length = 2379
Score = 233 bits (593), Expect = 8e-60
Identities = 111/171 (64%), Positives = 139/171 (81%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
R ++ +LE GYKV RH+T+ D+I+FNRQPSLHKMSIMGH+ K++PYSTFRLNL+VTSPY
Sbjct: 454 RKNSERELEYGYKVERHMTDEDYILFNRQPSLHKMSIMGHKAKILPYSTFRLNLAVTSPY 513
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLH+ Q+H TR+E+ LM+V + IVSPQGNKPVMGIVQD+LL FT RD
Sbjct: 514 NADFDGDEMNLHLAQSHETRSEIKHLMIVQKQIVSPQGNKPVMGIVQDSLLAIRKFTRRD 573
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVR 514
FL ++ MSLL+ + W+ VIP PAI+KP+ LWTGKQ+FS+LL +L R
Sbjct: 574 NFLTKEEVMSLLIWIPYWNHVIPTPAIMKPKALWTGKQIFSMLLQFEDLER 624
[247][TOP]
>UniRef100_Q2PYQ6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Scutellospora
heterogama RepID=Q2PYQ6_9GLOM
Length = 639
Score = 233 bits (593), Expect = 8e-60
Identities = 105/160 (65%), Positives = 134/160 (83%)
Frame = +2
Query: 17 VQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFD 196
V+L++G+KV RH+ +GD I+FNRQPSLHKMS+MGHR++VMPYSTFRLNLSVT+PYNADFD
Sbjct: 190 VRLQLGWKVERHLNDGDIIIFNRQPSLHKMSMMGHRVRVMPYSTFRLNLSVTTPYNADFD 249
Query: 197 GDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRR 376
GDEMN+HVPQ+ T+AE+ E+ MVP+ +VSPQ NKPVMGIVQDTL FT RD FL +
Sbjct: 250 GDEMNMHVPQSVETKAEISEICMVPKQVVSPQSNKPVMGIVQDTLCAVRKFTKRDCFLTK 309
Query: 377 DVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP 496
D+ M++L+ V WDG +P P I+KP PLWTGKQ+ S+++P
Sbjct: 310 DLVMNILMWVLDWDGRLPIPCILKPIPLWTGKQILSMIIP 349
[248][TOP]
>UniRef100_Q0PPZ8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hypocenomyce
scalaris RepID=Q0PPZ8_9LECA
Length = 1027
Score = 233 bits (593), Expect = 8e-60
Identities = 112/172 (65%), Positives = 136/172 (79%), Gaps = 1/172 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ ++ L+ G+KV RHI +GDFI+FNRQPSL+K S+MGHR++VMPYSTFRLNLSVTSPY
Sbjct: 367 KRAGEIMLQYGWKVERHIVDGDFIIFNRQPSLYKESMMGHRVRVMPYSTFRLNLSVTSPY 426
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAEV +L MVP IVSPQ N P+MGIVQDTL G RD
Sbjct: 427 NADFDGDEMNLHVPQSEETRAEVSQLCMVPLNIVSPQRNGPLMGIVQDTLCGVYKMCRRD 486
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVR 514
FL ++ M++LL V WDGVIP PAI+KP P WTGKQ+ SL++P +NL+R
Sbjct: 487 VFLTKEQVMNILLWVPDWDGVIPQPAILKPRPKWTGKQIISLVIPAGLNLIR 538
[249][TOP]
>UniRef100_Q0PPZ3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acarospora laqueata
RepID=Q0PPZ3_9LECA
Length = 1016
Score = 233 bits (593), Expect = 8e-60
Identities = 112/172 (65%), Positives = 135/172 (78%), Gaps = 1/172 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ ++ L+ G+KV RHI +GDFI+ NRQPSLHK S+MGHR++VMPYSTFRLNLSVTSPY
Sbjct: 356 KRAGEISLQYGWKVERHIVDGDFIILNRQPSLHKESMMGHRVRVMPYSTFRLNLSVTSPY 415
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAE+ +L MVP IVSPQ N P+MGIVQDTL G RD
Sbjct: 416 NADFDGDEMNLHVPQSEETRAEINQLCMVPLNIVSPQRNGPLMGIVQDTLCGVYKMCRRD 475
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLP-DVNLVR 514
FL ++ M++LL V WDGVIP PAIIKP P WTGKQ+ SL++P +NL+R
Sbjct: 476 VFLTKEQVMNILLWVPDWDGVIPQPAIIKPRPKWTGKQIISLVIPKGLNLIR 527
[250][TOP]
>UniRef100_A5H275 DNA-directed RNA polymerase (Fragment) n=1 Tax=Lecidea fuscoatra
RepID=A5H275_9LECA
Length = 1016
Score = 233 bits (593), Expect = 8e-60
Identities = 111/173 (64%), Positives = 136/173 (78%), Gaps = 1/173 (0%)
Frame = +2
Query: 2 RNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPY 181
+ ++ L+ G+KV RHI +GD+I+FNRQPSLHK S+MGHR++VMPYSTFRLNLSVTSPY
Sbjct: 354 KRAGEISLQYGWKVERHIVDGDYIIFNRQPSLHKESMMGHRVRVMPYSTFRLNLSVTSPY 413
Query: 182 NADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRD 361
NADFDGDEMNLHVPQ+ TRAE+ +L MVP IVSPQ N P+MGIVQDTL G RD
Sbjct: 414 NADFDGDEMNLHVPQSEETRAEINQLCMVPLNIVSPQRNGPLMGIVQDTLAGIYKMCRRD 473
Query: 362 TFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLL-PDVNLVRY 517
FL ++ M++LL V WDGVIP PAI+KP P WTGKQ+ SL++ P +NL R+
Sbjct: 474 VFLTKEQVMNILLWVPDWDGVIPQPAILKPRPKWTGKQIISLVVPPGLNLTRF 526