[UP]
[1][TOP] >UniRef100_C1MMA9 Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MMA9_9CHLO Length = 676 Score = 87.0 bits (214), Expect = 7e-16 Identities = 67/167 (40%), Positives = 81/167 (48%), Gaps = 2/167 (1%) Frame = +2 Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196 L G VLFVSPERLL+ERF S +R PGG Sbjct: 111 LRAGKFKVLFVSPERLLNERFLSDLRTV---------------------------PGG-- 141 Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376 VSL V+DEAHC+SEWSHNFRPAY L R+ R P VLAL+AT Sbjct: 142 ----VSLAVVDEAHCVSEWSHNFRPAYHRL---------GRILRARLRADCP-VLALSAT 187 Query: 377 ASVATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLL 511 A+ T ++ + LR P V +DV R NL LS +R P+ + LL Sbjct: 188 ATARTEKSLRAQLRIPREGVHRNDVIRPNLILSAMRVPSNSREATLL 234 [2][TOP] >UniRef100_Q7X829 OJ991113_30.2 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7X829_ORYSJ Length = 927 Score = 85.5 bits (210), Expect = 2e-15 Identities = 63/172 (36%), Positives = 81/172 (47%), Gaps = 2/172 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 RL G + VLFVSPER L+E F R Sbjct: 370 RLRAGEIKVLFVSPERFLNEEFLLIFR--------------------------------- 396 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 +P+SLV +DEAHCISEWSHNFRP+YL L +L R + +LA+TA Sbjct: 397 -DTLPISLVAIDEAHCISEWSHNFRPSYLRLRASL----------LRRKLNVQCILAMTA 445 Query: 374 TASVATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 TA+ T I +AL P+ ++ + R NLQLSI T D +L L+ LL Sbjct: 446 TATTQTLEEIMNALEIPSDNLIQTSQIRENLQLSI---STSDNRLKDLMLLL 494 [3][TOP] >UniRef100_Q7FAH0 OJ000223_09.17 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7FAH0_ORYSJ Length = 874 Score = 85.5 bits (210), Expect = 2e-15 Identities = 63/172 (36%), Positives = 81/172 (47%), Gaps = 2/172 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 RL G + VLFVSPER L+E F R Sbjct: 369 RLRAGEIKVLFVSPERFLNEEFLLIFR--------------------------------- 395 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 +P+SLV +DEAHCISEWSHNFRP+YL L +L R + +LA+TA Sbjct: 396 -DTLPISLVAIDEAHCISEWSHNFRPSYLRLRASL----------LRRKLNVQCILAMTA 444 Query: 374 TASVATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 TA+ T I +AL P+ ++ + R NLQLSI T D +L L+ LL Sbjct: 445 TATTQTLEEIMNALEIPSDNLIQTSQIRENLQLSI---STSDNRLKDLMLLL 493 [4][TOP] >UniRef100_Q0JC83 Os04g0486800 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0JC83_ORYSJ Length = 873 Score = 85.5 bits (210), Expect = 2e-15 Identities = 63/172 (36%), Positives = 81/172 (47%), Gaps = 2/172 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 RL G + VLFVSPER L+E F R Sbjct: 369 RLRAGEIKVLFVSPERFLNEEFLLIFR--------------------------------- 395 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 +P+SLV +DEAHCISEWSHNFRP+YL L +L R + +LA+TA Sbjct: 396 -DTLPISLVAIDEAHCISEWSHNFRPSYLRLRASL----------LRRKLNVQCILAMTA 444 Query: 374 TASVATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 TA+ T I +AL P+ ++ + R NLQLSI T D +L L+ LL Sbjct: 445 TATTQTLEEIMNALEIPSDNLIQTSQIRENLQLSI---STSDNRLKDLMLLL 493 [5][TOP] >UniRef100_C5YAX5 Putative uncharacterized protein Sb06g020690 n=1 Tax=Sorghum bicolor RepID=C5YAX5_SORBI Length = 567 Score = 85.5 bits (210), Expect = 2e-15 Identities = 63/170 (37%), Positives = 81/170 (47%), Gaps = 2/170 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 RL G + VLFVSPER L+E F R DG Sbjct: 66 RLRGGEIKVLFVSPERFLNEEFLLIFR---------------------------DG---- 94 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 +P+SLV +DEAHCISEWSHNFRP+YL L +L R + +LA+TA Sbjct: 95 ---LPISLVAIDEAHCISEWSHNFRPSYLRLRASL----------LRRKLNVQCILAMTA 141 Query: 374 TASVATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 TA+ T I +AL P+ ++ + R NLQLSI + L LLL+ Sbjct: 142 TATTQTLEEIVTALEIPSDNLIKTSQIRDNLQLSISTSNNRLKDLLLLLK 191 [6][TOP] >UniRef100_B9FFT7 Putative uncharacterized protein n=2 Tax=Oryza sativa RepID=B9FFT7_ORYSJ Length = 926 Score = 85.5 bits (210), Expect = 2e-15 Identities = 63/172 (36%), Positives = 81/172 (47%), Gaps = 2/172 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 RL G + VLFVSPER L+E F R Sbjct: 369 RLRAGEIKVLFVSPERFLNEEFLLIFR--------------------------------- 395 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 +P+SLV +DEAHCISEWSHNFRP+YL L +L R + +LA+TA Sbjct: 396 -DTLPISLVAIDEAHCISEWSHNFRPSYLRLRASL----------LRRKLNVQCILAMTA 444 Query: 374 TASVATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 TA+ T I +AL P+ ++ + R NLQLSI T D +L L+ LL Sbjct: 445 TATTQTLEEIMNALEIPSDNLIQTSQIRENLQLSI---STSDNRLKDLMLLL 493 [7][TOP] >UniRef100_UPI0001982B7E PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001982B7E Length = 941 Score = 84.0 bits (206), Expect = 6e-15 Identities = 59/156 (37%), Positives = 76/156 (48%), Gaps = 3/156 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 +L EG + VLFVSPER L+ F S + A GP Sbjct: 387 QLREGTIKVLFVSPERFLNAEFLSIVSA---------------------------GP--- 416 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHL-ADALHGSPGSRLFPPRGSPHAPAVLALT 370 P+SLVV+DEAHC+SEWSHNFRP+Y+ L A LH +A +LA+T Sbjct: 417 ----PISLVVVDEAHCVSEWSHNFRPSYMRLRASLLH-----------AVLNAKCILAMT 461 Query: 371 ATASVATAAAITSALRTP--TVVASDVARTNLQLSI 472 ATA+ T A+ AL P ++ R NLQLS+ Sbjct: 462 ATATSRTLHAVMHALEIPAANLIQKAQLRDNLQLSV 497 [8][TOP] >UniRef100_A7QBR8 Chromosome chr1 scaffold_75, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7QBR8_VITVI Length = 682 Score = 84.0 bits (206), Expect = 6e-15 Identities = 59/156 (37%), Positives = 76/156 (48%), Gaps = 3/156 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 +L EG + VLFVSPER L+ F S + A GP Sbjct: 126 QLREGTIKVLFVSPERFLNAEFLSIVSA---------------------------GP--- 155 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHL-ADALHGSPGSRLFPPRGSPHAPAVLALT 370 P+SLVV+DEAHC+SEWSHNFRP+Y+ L A LH +A +LA+T Sbjct: 156 ----PISLVVVDEAHCVSEWSHNFRPSYMRLRASLLH-----------AVLNAKCILAMT 200 Query: 371 ATASVATAAAITSALRTP--TVVASDVARTNLQLSI 472 ATA+ T A+ AL P ++ R NLQLS+ Sbjct: 201 ATATSRTLHAVMHALEIPAANLIQKAQLRDNLQLSV 236 [9][TOP] >UniRef100_B9RMM3 Rothmund-thomson syndrome DNA helicase recq4, putative n=1 Tax=Ricinus communis RepID=B9RMM3_RICCO Length = 852 Score = 82.8 bits (203), Expect = 1e-14 Identities = 56/152 (36%), Positives = 75/152 (49%), Gaps = 2/152 (1%) Frame = +2 Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202 EGA+ VLFVSPER L+ F SF+ A + Sbjct: 347 EGAIKVLFVSPERFLNVEFLSFISATS--------------------------------- 373 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 +SL+V+DEAHCISEWSHNFRP+Y+ L +L R + ++A+TATA+ Sbjct: 374 --ISLLVVDEAHCISEWSHNFRPSYMRLRASL----------LRSTLKVGCIIAMTATAT 421 Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSI 472 T I SAL P+ +V + R NLQLS+ Sbjct: 422 TTTLNVIMSALDIPSSNLVQNSQLRDNLQLSV 453 [10][TOP] >UniRef100_C1E6F3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E6F3_9CHLO Length = 652 Score = 82.0 bits (201), Expect = 2e-14 Identities = 66/171 (38%), Positives = 82/171 (47%), Gaps = 2/171 (1%) Frame = +2 Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196 L G + VLFVSPERLL+ERF S +R PGG Sbjct: 49 LRAGRLKVLFVSPERLLNERFLSDLRCV---------------------------PGG-- 79 Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376 VSL V+DEAHC+SEWSHNFRPAY L R+ R P VLAL+AT Sbjct: 80 ----VSLAVVDEAHCVSEWSHNFRPAYHRL---------GRILQSRLQLQGP-VLALSAT 125 Query: 377 ASVATAAAITSALRTPTVVA--SDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 A+ T + S L P A +D R NL L+ +R P +++ P L +L Sbjct: 126 ATARTERHLRSQLCIPKEGAYRNDTIRPNLTLAAMRVP-ANSRDPTLFYML 175 [11][TOP] >UniRef100_Q8W028 Helicase n=2 Tax=Arabidopsis thaliana RepID=Q8W028_ARATH Length = 870 Score = 81.6 bits (200), Expect = 3e-14 Identities = 56/155 (36%), Positives = 74/155 (47%), Gaps = 2/155 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 +L EG + VLFVSPERLL+ F S R Sbjct: 312 KLKEGIIKVLFVSPERLLNVEFLSMFRMS------------------------------- 340 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 + VSLVV+DEAHC+SEWSHNFRP+Y+ L S LF A +LA+TA Sbjct: 341 ---LSVSLVVVDEAHCVSEWSHNFRPSYMRL-------KASMLF---SELKAECILAMTA 387 Query: 374 TASVATAAAITSALRTPT--VVASDVARTNLQLSI 472 TA+ T A+ S+L P+ ++ R N +LS+ Sbjct: 388 TATTMTLQAVMSSLEIPSTNLIQKSQLRDNFELSV 422 [12][TOP] >UniRef100_Q0WVW7 Putative ATP-dependent DNA helicase RecQ n=1 Tax=Arabidopsis thaliana RepID=Q0WVW7_ARATH Length = 911 Score = 81.6 bits (200), Expect = 3e-14 Identities = 56/155 (36%), Positives = 74/155 (47%), Gaps = 2/155 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 +L EG + VLFVSPERLL+ F S R Sbjct: 353 KLKEGIIKVLFVSPERLLNVEFLSMFRMS------------------------------- 381 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 + VSLVV+DEAHC+SEWSHNFRP+Y+ L S LF A +LA+TA Sbjct: 382 ---LSVSLVVVDEAHCVSEWSHNFRPSYMRL-------KASMLF---SELKAECILAMTA 428 Query: 374 TASVATAAAITSALRTPT--VVASDVARTNLQLSI 472 TA+ T A+ S+L P+ ++ R N +LS+ Sbjct: 429 TATTMTLQAVMSSLEIPSTNLIQKSQLRDNFELSV 463 [13][TOP] >UniRef100_B9HTB0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HTB0_POPTR Length = 901 Score = 81.6 bits (200), Expect = 3e-14 Identities = 56/154 (36%), Positives = 77/154 (50%), Gaps = 2/154 (1%) Frame = +2 Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196 L EG + VLFVSPER L+ F S + Sbjct: 337 LQEGGIKVLFVSPERFLNAEFLSILSP--------------------------------- 363 Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376 +P+SL+V+DEAHCISEWSHNFRP+Y+ L +L +RL + +LA+TAT Sbjct: 364 --IPISLLVVDEAHCISEWSHNFRPSYMRLRASL---LCTRL-------NIGCILAMTAT 411 Query: 377 ASVATAAAITSALRTPT--VVASDVARTNLQLSI 472 A+ T AI SAL P+ ++ + R N+QLS+ Sbjct: 412 ATTTTLNAIMSALEIPSTNLIQNAKLRDNMQLSV 445 [14][TOP] >UniRef100_A9THL2 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9THL2_PHYPA Length = 727 Score = 80.1 bits (196), Expect = 9e-14 Identities = 56/161 (34%), Positives = 77/161 (47%), Gaps = 2/161 (1%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 I +++ G + VLF+SPERL SE F + M + Sbjct: 185 IMSKVISGHIKVLFISPERLFSETFLTAMDSLP--------------------------- 217 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 +SL V+DEAHC+SEWSHNFRP+Y L L RL P +LA Sbjct: 218 -------EISLAVVDEAHCLSEWSHNFRPSYYRLGKILK----QRL-------SVPCLLA 259 Query: 365 LTATASVATAAAITSALRTPT--VVASDVARTNLQLSIVRA 481 LTATA+ T +IT AL P+ ++ + R NL+LS+ R+ Sbjct: 260 LTATATKDTECSITKALSIPSSGILEASCVRHNLRLSVSRS 300 [15][TOP] >UniRef100_A4RY08 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RY08_OSTLU Length = 685 Score = 79.3 bits (194), Expect = 1e-13 Identities = 59/161 (36%), Positives = 76/161 (47%), Gaps = 2/161 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 RL G + VLFVSPERLL+E F + ++ + PGG Sbjct: 113 RLRAGELKVLFVSPERLLNEHFVNDLQ---------------------------NVPGG- 144 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 VSL +DEAHC+SEWSHNFRPAY L L+ A LALTA Sbjct: 145 -----VSLACIDEAHCVSEWSHNFRPAYHRLGRILN-----------DRVQAQTTLALTA 188 Query: 374 TASVATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTV 490 TA+ T ++ L P+ V+ + R NL LS++R P V Sbjct: 189 TATKKTEVSLIKQLGIPSEGVMRNVRVRDNLILSVMRVPDV 229 [16][TOP] >UniRef100_Q018J1 ATP-dependent DNA helicase (ISS) (Fragment) n=1 Tax=Ostreococcus tauri RepID=Q018J1_OSTTA Length = 973 Score = 78.6 bits (192), Expect = 2e-13 Identities = 58/159 (36%), Positives = 74/159 (46%), Gaps = 2/159 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 RL G + VLFVSPERLL++ F + ++ D PGG Sbjct: 518 RLRAGKIKVLFVSPERLLNDNFINDLQ---------------------------DVPGG- 549 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 VSL +DEAHC+SEWSHNFRPAY L L+ A LALTA Sbjct: 550 -----VSLACVDEAHCVSEWSHNFRPAYHRLGRILN-----------DRVRAKTTLALTA 593 Query: 374 TASVATAAAITSALRTPT--VVASDVARTNLQLSIVRAP 484 TA+ T ++ L P V+ + R NL LS++R P Sbjct: 594 TATKKTELSLIRQLNIPNEGVLRNVRVRDNLILSVMRVP 632 [17][TOP] >UniRef100_Q03GM2 ATP-dependent DNA helicase RecQ n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03GM2_PEDPA Length = 584 Score = 78.2 bits (191), Expect = 3e-13 Identities = 53/166 (31%), Positives = 72/166 (43%) Frame = +2 Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202 +GAV +L++SPERL SE F R Sbjct: 103 QGAVKLLYISPERLDSEYF------------------------------------DRLAE 126 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 +P+ L+ +DEAHCIS+W H+FRP+YL L D +H P P ++ALTATA+ Sbjct: 127 LPIDLIAIDEAHCISQWGHDFRPSYLKLTDIIH-----------HLPTRPTIIALTATAT 175 Query: 383 VATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I L V + AR NL +V+ D L L+L Sbjct: 176 PRVAEDIKQRLAIQQEVQTGFARPNLSFKVVKDQDSDRFLIDYLKL 221 [18][TOP] >UniRef100_A9ALZ9 ATP-dependent DNA helicase n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9ALZ9_BURM1 Length = 607 Score = 76.3 bits (186), Expect = 1e-12 Identities = 55/155 (35%), Positives = 71/155 (45%), Gaps = 2/155 (1%) Frame = +2 Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196 L +G ++FV+PERL F + AGG Sbjct: 108 LRDGRTRIVFVTPERLAQPAFVDVL-------------------------AGGT------ 136 Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376 RVPV LVV+DEAHC+S+W H+FRPA+L +A A+ G P VLALTAT Sbjct: 137 -RVPVELVVVDEAHCVSKWGHDFRPAFLDIAHAVDTIGG------------PPVLALTAT 183 Query: 377 ASVATAAAITSA--LRTPTVVASDVARTNLQLSIV 475 A+ I A LR PT+V + R NL +V Sbjct: 184 ATPEVVDDIVHALRLRKPTIVRTGTYRPNLHYRVV 218 [19][TOP] >UniRef100_B9BJJ7 ATP-dependent DNA helicase RecQ n=2 Tax=Burkholderia multivorans RepID=B9BJJ7_9BURK Length = 609 Score = 76.3 bits (186), Expect = 1e-12 Identities = 55/155 (35%), Positives = 71/155 (45%), Gaps = 2/155 (1%) Frame = +2 Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196 L +G ++FV+PERL F + AGG Sbjct: 110 LRDGRTRIVFVTPERLAQPAFVDVL-------------------------AGGT------ 138 Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376 RVPV LVV+DEAHC+S+W H+FRPA+L +A A+ G P VLALTAT Sbjct: 139 -RVPVELVVVDEAHCVSKWGHDFRPAFLDIAHAVDTIGG------------PPVLALTAT 185 Query: 377 ASVATAAAITSA--LRTPTVVASDVARTNLQLSIV 475 A+ I A LR PT+V + R NL +V Sbjct: 186 ATPEVVDDIVHALRLRDPTIVRTGTYRPNLHYRVV 220 [20][TOP] >UniRef100_B9B7X0 ATP-dependent DNA helicase RecQ n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B7X0_9BURK Length = 607 Score = 76.3 bits (186), Expect = 1e-12 Identities = 55/155 (35%), Positives = 71/155 (45%), Gaps = 2/155 (1%) Frame = +2 Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196 L +G ++FV+PERL F + AGG Sbjct: 108 LRDGRTRIVFVTPERLAQPAFVDVL-------------------------AGGT------ 136 Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376 RVPV LVV+DEAHC+S+W H+FRPA+L +A A+ G P VLALTAT Sbjct: 137 -RVPVELVVVDEAHCVSKWGHDFRPAFLDIAHAVDTIGG------------PPVLALTAT 183 Query: 377 ASVATAAAITSA--LRTPTVVASDVARTNLQLSIV 475 A+ I A LR PT+V + R NL +V Sbjct: 184 ATPEVVDDIVHALRLRDPTIVRTGTYRPNLHYRVV 218 [21][TOP] >UniRef100_C0WRJ3 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus buchneri ATCC 11577 RepID=C0WRJ3_LACBU Length = 587 Score = 74.7 bits (182), Expect = 4e-12 Identities = 54/166 (32%), Positives = 71/166 (42%) Frame = +2 Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202 EGAV +L+VSPERL S F+ Sbjct: 103 EGAVKLLYVSPERLDSGAFSQLAN------------------------------------ 126 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 +P+ LV +DEAHCIS+W H+FRP+YL L D LH P P ++ALTATA+ Sbjct: 127 LPIDLVAVDEAHCISQWGHDFRPSYLALTDRLH-----------ELPTRPTIVALTATAT 175 Query: 383 VATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I + L V + R NL +V+ D L L+L Sbjct: 176 PRVAEDIKARLDLVDEVKTGFERDNLSFKVVKDQDSDRYLLDYLKL 221 [22][TOP] >UniRef100_C2D2U3 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus brevis subsp. gravesensis ATCC 27305 RepID=C2D2U3_LACBR Length = 587 Score = 74.3 bits (181), Expect = 5e-12 Identities = 54/166 (32%), Positives = 71/166 (42%) Frame = +2 Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202 EGAV +L+VSPERL S F+ Sbjct: 103 EGAVKLLYVSPERLDSGAFSQLAS------------------------------------ 126 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 +P+ LV +DEAHCIS+W H+FRP+YL L D LH P P ++ALTATA+ Sbjct: 127 LPIDLVAVDEAHCISQWGHDFRPSYLALTDRLH-----------ELPTRPTIVALTATAT 175 Query: 383 VATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I + L V + R NL +V+ D L L+L Sbjct: 176 PRVAEDIKARLDLVDEVKTGFERDNLSFKVVKDQDSDRYLLDYLKL 221 [23][TOP] >UniRef100_A1A0P0 ATP-dependent DNA helicase RecQ n=1 Tax=Bifidobacterium adolescentis ATCC 15703 RepID=A1A0P0_BIFAA Length = 674 Score = 73.9 bits (180), Expect = 6e-12 Identities = 49/160 (30%), Positives = 70/160 (43%), Gaps = 2/160 (1%) Frame = +2 Query: 20 LEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAP 199 L G + +L+V+PERL +ERF +F A Sbjct: 137 LSGQIKLLYVAPERLETERFRNF-----------------------------------AV 161 Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379 RVP+SLV +DEAHC+S+W +FR +YL + + + G P P V A TATA Sbjct: 162 RVPISLVAVDEAHCVSQWGQDFRSSYLGIGEFI-----------AGLPTRPTVAAFTATA 210 Query: 380 SVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVD 493 + I S L TP++ + R NL ++ P D Sbjct: 211 TERVRRDIVSILGLHTPSITVTGFDRPNLYFDVISMPRKD 250 [24][TOP] >UniRef100_C8ZZN5 ATP-dependent DNA helicase RecQ n=1 Tax=Enterococcus gallinarum EG2 RepID=C8ZZN5_ENTGA Length = 588 Score = 73.9 bits (180), Expect = 6e-12 Identities = 50/154 (32%), Positives = 71/154 (46%), Gaps = 2/154 (1%) Frame = +2 Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202 +G + +L+V+PERL S+ F +R Sbjct: 104 KGEIKLLYVAPERLESDHFRELLRY----------------------------------- 128 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 VP+SL+ +DEAHCIS+W H+FRP+YL LA+ +H F R P V+ALTATA+ Sbjct: 129 VPISLLAVDEAHCISQWGHDFRPSYLRLAETIHS------FDQR-----PTVVALTATAT 177 Query: 383 VATAAAITSALRTP--TVVASDVARTNLQLSIVR 478 A I L P V + AR NL +++ Sbjct: 178 PKVAQDIERLLLIPPENQVKTGFARENLSFEVIK 211 [25][TOP] >UniRef100_A7A4M3 Putative uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4M3_BIFAD Length = 674 Score = 73.9 bits (180), Expect = 6e-12 Identities = 49/160 (30%), Positives = 70/160 (43%), Gaps = 2/160 (1%) Frame = +2 Query: 20 LEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAP 199 L G + +L+V+PERL +ERF +F A Sbjct: 137 LSGQIKLLYVAPERLETERFRNF-----------------------------------AV 161 Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379 RVP+SLV +DEAHC+S+W +FR +YL + + + G P P V A TATA Sbjct: 162 RVPISLVAVDEAHCVSQWGQDFRSSYLGIGEFI-----------AGLPTRPTVAAFTATA 210 Query: 380 SVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVD 493 + I S L TP++ + R NL ++ P D Sbjct: 211 TERVRRDIVSILGLHTPSITVTGFDRPNLYFDVISMPRKD 250 [26][TOP] >UniRef100_UPI0000E81D64 PREDICTED: similar to RecQ4 protein, partial n=1 Tax=Gallus gallus RepID=UPI0000E81D64 Length = 479 Score = 73.6 bits (179), Expect = 8e-12 Identities = 59/172 (34%), Positives = 71/172 (41%), Gaps = 4/172 (2%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 R+ EG+ VL +SPE L+ AH + Sbjct: 222 RVQEGSAQVLLLSPEALVGTGSCCLPPAHQLP---------------------------- 253 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 PV+ +DEAHCISEWSHNFRP+YL L L G R F LALTA Sbjct: 254 ----PVAFACIDEAHCISEWSHNFRPSYLRLCKVLRDRLGIRCF-----------LALTA 298 Query: 374 TASVATAAAITSALRTP----TVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 TA+VATA + + L P V NLQLS+ D L LLR Sbjct: 299 TATVATARDVAAHLGIPQQDGIAVQCAAVPPNLQLSVSVEWDRDRALVNLLR 350 [27][TOP] >UniRef100_C7JHF1 DNA helicase RecQ n=8 Tax=Acetobacter pasteurianus RepID=C7JHF1_ACEP3 Length = 626 Score = 73.6 bits (179), Expect = 8e-12 Identities = 53/159 (33%), Positives = 68/159 (42%), Gaps = 2/159 (1%) Frame = +2 Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181 +I L G +D+L++SPERLLS G Sbjct: 121 KIRSDLANGRIDLLYISPERLLSS-----------------------------------G 145 Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361 R R+P+S++ +DEAHCIS W H FRP Y L PR PH P + Sbjct: 146 TLDRLVRIPLSVIAIDEAHCISAWGHEFRPEYRALTAL-----------PRHFPHVPRI- 193 Query: 362 ALTATASVATAAAITSALRTP--TVVASDVARTNLQLSI 472 ALTATA T I +AL P V+ S R NL +S+ Sbjct: 194 ALTATADERTREDILAALDMPHAEVLVSSFHRPNLNISV 232 [28][TOP] >UniRef100_B6GD73 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GD73_9ACTN Length = 662 Score = 73.2 bits (178), Expect = 1e-11 Identities = 49/152 (32%), Positives = 67/152 (44%), Gaps = 2/152 (1%) Frame = +2 Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202 EG +++V+PERL RF +F +A A GG G Sbjct: 105 EGWYQIMYVAPERLADPRFLAFAQAAAAPGGIG--------------------------- 137 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 V LV +DEAHC+S+W +FRP+YL +AD + P P V A TATA+ Sbjct: 138 --VPLVAVDEAHCVSQWGQDFRPSYLQIADFID-----------ALPQRPVVAAFTATAT 184 Query: 383 VATAAAITSA--LRTPTVVASDVARTNLQLSI 472 A I LR+P V + R NL ++ Sbjct: 185 DRVRADIAGMLHLRSPETVVTGFDRANLSFNV 216 [29][TOP] >UniRef100_A2WE26 Superfamily II DNA helicase n=1 Tax=Burkholderia dolosa AUO158 RepID=A2WE26_9BURK Length = 654 Score = 73.2 bits (178), Expect = 1e-11 Identities = 52/155 (33%), Positives = 70/155 (45%), Gaps = 2/155 (1%) Frame = +2 Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196 L EG ++FV+PERL F + GR Sbjct: 159 LREGRTRIVFVTPERLAQPAFVDVL-------------------------------AGRM 187 Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376 ++PV LVV+DEAHC+S+W H+FRPA+L +A A+ G P VLALTAT Sbjct: 188 -QLPVELVVVDEAHCVSKWGHDFRPAFLDIAHAVETIGG------------PPVLALTAT 234 Query: 377 ASVATAAAITSA--LRTPTVVASDVARTNLQLSIV 475 A+ I A LR PT+V + R NL ++ Sbjct: 235 ATPEVVEDIVHALRLREPTIVRTGTYRPNLHYRVI 269 [30][TOP] >UniRef100_C5C8V2 ATP-dependent DNA helicase RecQ n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5C8V2_MICLC Length = 734 Score = 72.8 bits (177), Expect = 1e-11 Identities = 55/175 (31%), Positives = 76/175 (43%), Gaps = 5/175 (2%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 + RL VDVL +SPERL + RF + G Sbjct: 132 VRARLAADEVDVLLISPERLTNPRFRDEQLPDLVARMG---------------------- 169 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 L+V+DEAHCIS+W H+FRP Y + D + L P G P A VLA Sbjct: 170 ----------LLVVDEAHCISDWGHDFRPDYRRIRDLI------GLLPAEG-PRAVPVLA 212 Query: 365 LTATASVATAAAITSALRTPT-----VVASDVARTNLQLSIVRAPTVDAKLPLLL 514 TATA+ A + L + V+ +AR +L+L ++R P+ A+L LL Sbjct: 213 TTATANARVVADVVEQLGVASEQDVFVLRGPLARASLRLGVLRMPSPAARLAWLL 267 [31][TOP] >UniRef100_A1T017 ATP-dependent DNA helicase RecQ n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T017_PSYIN Length = 636 Score = 72.4 bits (176), Expect = 2e-11 Identities = 57/165 (34%), Positives = 77/165 (46%), Gaps = 2/165 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G V +LF+S ERL SERF F++ ++ Sbjct: 102 GQVKILFISVERLNSERFRLFLK-----------------------------------KI 126 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+SL+V+DEAHCISEW HNFRP YL LA L+ R + P VL LTATA+ Sbjct: 127 PISLLVVDEAHCISEWGHNFRPDYLKLA----------LY--RREFNIPQVLLLTATATQ 174 Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLL 514 A + + A+ + + R NL LS++ + D KL LL Sbjct: 175 KVIADMGNKFAIDADNITLTGSYRANLNLSVLGVGSFD-KLNTLL 218 [32][TOP] >UniRef100_C0BPW3 Putative uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 RepID=C0BPW3_9BIFI Length = 641 Score = 72.4 bits (176), Expect = 2e-11 Identities = 49/155 (31%), Positives = 68/155 (43%), Gaps = 2/155 (1%) Frame = +2 Query: 20 LEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAP 199 L G + +L+V+PERL +ERF +F A Sbjct: 106 LSGRIRLLYVAPERLETERFRTF-----------------------------------AS 130 Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379 RVP+SLV +DEAHC+S+W +FR +YL + D L + P P V A TATA Sbjct: 131 RVPISLVAVDEAHCVSQWGQDFRSSYLGIGDFL-----------KALPTRPTVAAFTATA 179 Query: 380 SVATAAAITS--ALRTPTVVASDVARTNLQLSIVR 478 + I LR P+V + R NL ++R Sbjct: 180 TERVRRDIIGILGLRDPSVTVTGFDRANLYFDVIR 214 [33][TOP] >UniRef100_B6XX87 Putative uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 RepID=B6XX87_9BIFI Length = 657 Score = 72.4 bits (176), Expect = 2e-11 Identities = 49/155 (31%), Positives = 68/155 (43%), Gaps = 2/155 (1%) Frame = +2 Query: 20 LEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAP 199 L G + +L+V+PERL +ERF +F A Sbjct: 122 LSGRIRLLYVAPERLETERFRTF-----------------------------------AS 146 Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379 RVP+SLV +DEAHC+S+W +FR +YL + D L + P P V A TATA Sbjct: 147 RVPISLVAVDEAHCVSQWGQDFRSSYLGIGDFL-----------KALPTRPTVAAFTATA 195 Query: 380 SVATAAAITS--ALRTPTVVASDVARTNLQLSIVR 478 + I LR P+V + R NL ++R Sbjct: 196 TERVRRDIIGILGLRDPSVTVTGFDRANLYFDVIR 230 [34][TOP] >UniRef100_B2TB59 ATP-dependent DNA helicase, RecQ family n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2TB59_BURPP Length = 588 Score = 72.0 bits (175), Expect = 2e-11 Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 2/164 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 R+ G ++FV+PERL F +R+HA Sbjct: 107 RIAGGEGGIVFVTPERLTQPAFIDILRSHADRR--------------------------- 139 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 + LVV+DEAHC+S W H+FRPA+L +A A+ + P VLALTA Sbjct: 140 -----IGLVVVDEAHCVSHWGHDFRPAFLEIASAVK------------AIGRPPVLALTA 182 Query: 374 TASVATAAAITSA--LRTPTVVASDVARTNLQLSIVRAPTVDAK 499 TA+ I + LR P +V + R NL+ +V+ T K Sbjct: 183 TATAEVLEDIVRSLGLREPRIVRTGTLRQNLRYRVVQVSTAGGK 226 [35][TOP] >UniRef100_C2M9T4 ATP-dependent DNA helicase RecQ n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2M9T4_9PORP Length = 714 Score = 72.0 bits (175), Expect = 2e-11 Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 2/107 (1%) Frame = +2 Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376 P +P+ L+V+DE HCIS+W ++FRP+YL +A+ R +P A +LALTAT Sbjct: 207 PELPIRLIVVDECHCISQWGYDFRPSYLKIAEI------RRYYP------AVPLLALTAT 254 Query: 377 ASVATAAAITSAL--RTPTVVASDVARTNLQLSIVRAPTVDAKLPLL 511 A+ A + + L R P V++S AR NLQ IVR PT+D LL Sbjct: 255 ATPEVVADVMARLSFRKPHVISSSFARDNLQY-IVR-PTMDKATELL 299 [36][TOP] >UniRef100_A3Y6N2 Putative helicase (RecQ-like) n=1 Tax=Marinomonas sp. MED121 RepID=A3Y6N2_9GAMM Length = 683 Score = 72.0 bits (175), Expect = 2e-11 Identities = 55/165 (33%), Positives = 73/165 (44%), Gaps = 2/165 (1%) Frame = +2 Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202 EG + +L VS ER +E F +F+ Sbjct: 103 EGQIKILMVSVERFNNESFRNFLHT----------------------------------- 127 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 + +SL+V+DEAHCISEW HNFRP YL L D R F + P VL LTATA+ Sbjct: 128 LSISLLVVDEAHCISEWGHNFRPDYLKLPDY------QRQF------NIPLVLLLTATAA 175 Query: 383 --VATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLL 511 V A A+ +V + R+NL L+++ P VD K LL Sbjct: 176 PKVKRDMAAKFAIDEQHIVQTGFYRSNLNLTVLSVPQVDKKAALL 220 [37][TOP] >UniRef100_C5EA42 ATP-dependent DNA helicase RecQ n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EA42_BIFLO Length = 549 Score = 71.2 bits (173), Expect = 4e-11 Identities = 49/161 (30%), Positives = 71/161 (44%), Gaps = 2/161 (1%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 + GR L G + +L+V+PERL + FA F Sbjct: 110 VYGRALSGELRILYVAPERLHAPDFADFSH------------------------------ 139 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 R+ +SL+ +DEAHC+ W +FRP+Y+ + + + PR P +A Sbjct: 140 -----RIRISLLAVDEAHCVLHWGSDFRPSYMRIGEFIDS------LSPR-----PVTMA 183 Query: 365 LTATASVATAAAITSALR--TPTVVASDVARTNLQLSIVRA 481 LTATAS A I L P V +D R NL+L++VRA Sbjct: 184 LTATASRTQAGEIRELLHLADPVTVTTDADRPNLRLTVVRA 224 [38][TOP] >UniRef100_C2GU55 Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 55813 RepID=C2GU55_BIFLO Length = 542 Score = 71.2 bits (173), Expect = 4e-11 Identities = 49/161 (30%), Positives = 71/161 (44%), Gaps = 2/161 (1%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 + GR L G + +L+V+PERL + FA F Sbjct: 102 VYGRALSGELRILYVAPERLHAPDFADFSH------------------------------ 131 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 R+ +SL+ +DEAHC+ W +FRP+Y+ + + + PR P +A Sbjct: 132 -----RIRISLLAVDEAHCVLHWGSDFRPSYMRIGEFIDS------LSPR-----PVTMA 175 Query: 365 LTATASVATAAAITSALR--TPTVVASDVARTNLQLSIVRA 481 LTATAS A I L P V +D R NL+L++VRA Sbjct: 176 LTATASRTQAGEIRELLHLADPVTVTTDADRPNLRLTVVRA 216 [39][TOP] >UniRef100_B1G0H5 ATP-dependent DNA helicase, RecQ family n=1 Tax=Burkholderia graminis C4D1M RepID=B1G0H5_9BURK Length = 577 Score = 70.9 bits (172), Expect = 5e-11 Identities = 53/164 (32%), Positives = 71/164 (43%), Gaps = 2/164 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 R+ G ++FV+PERL F +RA Sbjct: 98 RIAAGDSGIVFVTPERLAQPAFIETLRAR------------------------------- 126 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 P V LVV+DEAHC+S W H+FRPA+L +A A+ + P VLALTA Sbjct: 127 -PENRVGLVVVDEAHCVSHWGHDFRPAFLEIAAAVK------------ALGQPPVLALTA 173 Query: 374 TAS--VATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAK 499 TA+ V + ALR P VV + R NL+ +V+ T K Sbjct: 174 TATQRVIDDIVHSLALRDPLVVRTGTYRENLRYRVVQVSTAGGK 217 [40][TOP] >UniRef100_A8VRE3 Aldose 1-epimerase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRE3_9BACI Length = 591 Score = 70.9 bits (172), Expect = 5e-11 Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 4/105 (3%) Frame = +2 Query: 176 DGPGGRA--PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHA 349 + PG A ++PVSL+ +DEAHC+S+W H+FRP+YL + + + RLF P Sbjct: 119 ESPGFNAMFEQLPVSLIAVDEAHCLSQWGHDFRPSYLRIPELI-----GRLFEP------ 167 Query: 350 PAVLALTATASVATAAAITSALRTPTV--VASDVARTNLQLSIVR 478 P VLALTATA+ A I S L P V + AR NL + + Sbjct: 168 PPVLALTATATPEVADGIVSILGIPASNRVQTGFARENLAFHVAK 212 [41][TOP] >UniRef100_UPI000174595E superfamily II DNA and RNA helicases, RecQ-like protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174595E Length = 648 Score = 70.1 bits (170), Expect = 9e-11 Identities = 56/176 (31%), Positives = 78/176 (44%), Gaps = 2/176 (1%) Frame = +2 Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181 ++ G + G + +L+++PERL+SE F Sbjct: 98 QVLGDMRSGRLKLLYIAPERLMSESFME-------------------------------- 125 Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361 R RV +SL+ +DE+HCISEW HNFRP YL LA+ + +L P VL Sbjct: 126 ---RLSRVKISLLAIDESHCISEWGHNFRPEYLRLAEV---ARKLQLHP---------VL 170 Query: 362 ALTATASVATAAAITSALRTPTV--VASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 ALTATA+ A I R + + R NL + I AP V +L LL + L Sbjct: 171 ALTATATPGVAEDIRRTFRIAPEDHIQTTFLRRNLAIQITPAP-VKQRLALLTQKL 225 [42][TOP] >UniRef100_Q88Y35 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus plantarum RepID=Q88Y35_LACPL Length = 602 Score = 70.1 bits (170), Expect = 9e-11 Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 2/100 (2%) Frame = +2 Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379 R+P+ L+ +DEAHCIS+W H+FRP+YL L+ A+ P P VLALTATA Sbjct: 131 RLPIQLLAIDEAHCISQWGHDFRPSYLALSTAIEQLPTH-----------PQVLALTATA 179 Query: 380 SVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVD 493 + AA I A+ V + AR NL L++V+ D Sbjct: 180 TEQVAADICGRLAINPQHEVNTGFARDNLDLTVVKDQDTD 219 [43][TOP] >UniRef100_A3PZK0 ATP-dependent DNA helicase, RecQ family n=1 Tax=Mycobacterium sp. JLS RepID=A3PZK0_MYCSJ Length = 543 Score = 70.1 bits (170), Expect = 9e-11 Identities = 44/105 (41%), Positives = 54/105 (51%), Gaps = 6/105 (5%) Frame = +2 Query: 176 DGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADAL----HGSPGSRLFPPRGSP 343 D GR VSL+V+DEAHC+S W H+FRP YL LADA +G+P Sbjct: 128 DAVVGRLAEAAVSLIVVDEAHCVSAWGHDFRPDYLRLADAFAQFGNGAP----------- 176 Query: 344 HAPAVLALTATASVATAAAITS--ALRTPTVVASDVARTNLQLSI 472 V+ALTATASV I LR P +V + R NL L + Sbjct: 177 ----VVALTATASVVVRREIVERLGLRDPLMVVGNFDRPNLTLEV 217 [44][TOP] >UniRef100_A1UFZ0 ATP-dependent DNA helicase, RecQ family n=2 Tax=Mycobacterium RepID=A1UFZ0_MYCSK Length = 543 Score = 70.1 bits (170), Expect = 9e-11 Identities = 44/105 (41%), Positives = 54/105 (51%), Gaps = 6/105 (5%) Frame = +2 Query: 176 DGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADAL----HGSPGSRLFPPRGSP 343 D GR VSL+V+DEAHC+S W H+FRP YL LADA +G+P Sbjct: 128 DAVVGRLAEAAVSLIVVDEAHCVSAWGHDFRPDYLRLADAFAQFGNGAP----------- 176 Query: 344 HAPAVLALTATASVATAAAITS--ALRTPTVVASDVARTNLQLSI 472 V+ALTATASV I LR P +V + R NL L + Sbjct: 177 ----VVALTATASVVVRREIVERLGLRDPLMVVGNFDRPNLTLEV 217 [45][TOP] >UniRef100_A0KL03 DNA helicase n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KL03_AERHH Length = 642 Score = 70.1 bits (170), Expect = 9e-11 Identities = 50/163 (30%), Positives = 73/163 (44%), Gaps = 2/163 (1%) Frame = +2 Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181 R+ + +G + +L +S ERL +ERF F++ Sbjct: 95 RVMQQASDGQLKILMISVERLKNERFRRFIQ----------------------------- 125 Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361 +VP+S++V+DEAHCISEW HNFRP YL L D R P VL Sbjct: 126 ------QVPLSMLVVDEAHCISEWGHNFRPDYLKLPDY------------RRELQIPQVL 167 Query: 362 ALTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAP 484 LTATA+ A A + + + ++ + R NL L++V P Sbjct: 168 LLTATATPAVMADMQAKFEIEDEGLIVTGFYRANLDLAVVPLP 210 [46][TOP] >UniRef100_UPI000176083D PREDICTED: similar to RecQ protein-like 4 n=1 Tax=Danio rerio RepID=UPI000176083D Length = 1389 Score = 69.7 bits (169), Expect = 1e-10 Identities = 58/168 (34%), Positives = 70/168 (41%), Gaps = 4/168 (2%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G V VL +SPE L+ GGG G G P + P Sbjct: 753 GQVHVLLLSPEALV---------------GGGHSGSGCLP------------PADQLP-- 783 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 PV+ +DEAHC+SEWSHNFRP YL L L G R +L LTATA++ Sbjct: 784 PVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRDRLGVR-----------CLLGLTATATL 832 Query: 386 ATAAAITSAL----RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 +TA I L V S NLQLS+ D L LL+ Sbjct: 833 STALDIARHLDISDEDGIAVRSAAVPHNLQLSVSMDRDKDQALVSLLK 880 [47][TOP] >UniRef100_UPI00005A2A13 PREDICTED: similar to ATP-dependent DNA helicase Q4 (RecQ protein-like 4) (RecQ4) n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A13 Length = 1209 Score = 69.7 bits (169), Expect = 1e-10 Identities = 49/126 (38%), Positives = 58/126 (46%), Gaps = 8/126 (6%) Frame = +2 Query: 164 GAGGDGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSP 343 GAG PG PV+ +DEAHCIS+WSHNFRP YL + L G R F Sbjct: 584 GAGAGMPGHLPQLPPVAFACIDEAHCISQWSHNFRPCYLRVCKVLREHMGVRCF------ 637 Query: 344 HAPAVLALTATASVATAAAITS--------ALRTPTVVASDVARTNLQLSIVRAPTVDAK 499 L LTATA+ +TA + LR P V S NL LS+ R D Sbjct: 638 -----LGLTATATRSTARDVARHLGVAEELVLRGPATVPS-----NLHLSVSRDRDPDQA 687 Query: 500 LPLLLR 517 L LL+ Sbjct: 688 LVTLLQ 693 [48][TOP] >UniRef100_UPI0000EB247A ATP-dependent DNA helicase Q4 (EC 3.6.1.-) (RecQ protein-like 4) (RecQ4) (RTS). n=1 Tax=Canis lupus familiaris RepID=UPI0000EB247A Length = 1163 Score = 69.7 bits (169), Expect = 1e-10 Identities = 49/126 (38%), Positives = 58/126 (46%), Gaps = 8/126 (6%) Frame = +2 Query: 164 GAGGDGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSP 343 GAG PG PV+ +DEAHCIS+WSHNFRP YL + L G R F Sbjct: 599 GAGAGMPGHLPQLPPVAFACIDEAHCISQWSHNFRPCYLRVCKVLREHMGVRCF------ 652 Query: 344 HAPAVLALTATASVATAAAITS--------ALRTPTVVASDVARTNLQLSIVRAPTVDAK 499 L LTATA+ +TA + LR P V S NL LS+ R D Sbjct: 653 -----LGLTATATRSTARDVARHLGVAEELVLRGPATVPS-----NLHLSVSRDRDPDQA 702 Query: 500 LPLLLR 517 L LL+ Sbjct: 703 LVTLLQ 708 [49][TOP] >UniRef100_B2JRY6 ATP-dependent DNA helicase, RecQ family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JRY6_BURP8 Length = 590 Score = 69.7 bits (169), Expect = 1e-10 Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 2/90 (2%) Frame = +2 Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388 VSLVV+DEAHC+S+W H+FRPA+L + DA+ S P +LALTATA+ A Sbjct: 155 VSLVVVDEAHCVSQWGHDFRPAFLQIGDAVE------------SLGRPPILALTATATEA 202 Query: 389 TAAAI--TSALRTPTVVASDVARTNLQLSI 472 I T +R P V+ + V R NL S+ Sbjct: 203 VVDDIVRTLGMREPRVLQTGVYRPNLHYSV 232 [50][TOP] >UniRef100_UPI0001B43382 hypothetical protein LmonF_08890 n=1 Tax=Listeria monocytogenes FSL F2-515 RepID=UPI0001B43382 Length = 254 Score = 69.3 bits (168), Expect = 2e-10 Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 2/103 (1%) Frame = +2 Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379 +VP+SL +DEAHCIS+W H+FRP+YL L D+L P V+ALTATA Sbjct: 129 QVPISLFAIDEAHCISQWGHDFRPSYLTLCDSLD-----------KMTRRPLVIALTATA 177 Query: 380 SVATAAAITSAL--RTPTVVASDVARTNLQLSIVRAPTVDAKL 502 + A + I L R +VV + +R NL +V+ D L Sbjct: 178 TQAVSDDICRLLKIRADSVVKTGFSRDNLAFQVVKGQDKDKYL 220 [51][TOP] >UniRef100_UPI0000F3FF8E hypothetical protein Lmon1_05584 n=1 Tax=Listeria monocytogenes 10403S RepID=UPI0000F3FF8E Length = 590 Score = 69.3 bits (168), Expect = 2e-10 Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 2/103 (1%) Frame = +2 Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379 +VP+SL +DEAHCIS+W H+FRP+YL L D+L P V+ALTATA Sbjct: 129 QVPISLFAIDEAHCISQWGHDFRPSYLTLCDSLD-----------KMTRRPLVIALTATA 177 Query: 380 SVATAAAITSAL--RTPTVVASDVARTNLQLSIVRAPTVDAKL 502 + A + I L R +VV + +R NL +V+ D L Sbjct: 178 TQAVSDDICRLLKIRADSVVKTGFSRDNLAFQVVKGQDKDKYL 220 [52][TOP] >UniRef100_Q2Y6M6 ATP-dependent DNA helicase, RecQ family n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6M6_NITMU Length = 602 Score = 69.3 bits (168), Expect = 2e-10 Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 2/109 (1%) Frame = +2 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 +P++L V+DEAHCIS+W H+FRPAYL L DA+ + P VLALTATA+ Sbjct: 167 IPINLFVIDEAHCISQWGHDFRPAYLGLGDAIK------------ALGKPTVLALTATAT 214 Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 I L + VV + + R NL S+++ + KL L L+ Sbjct: 215 PEVIEDIAQQLGRSSMHVVNTGIYRPNLNYSVLQVTNPEEKLEKLQDLI 263 [53][TOP] >UniRef100_C9B1M5 ATP-dependent DNA helicase RecQ n=2 Tax=Enterococcus casseliflavus RepID=C9B1M5_ENTCA Length = 588 Score = 69.3 bits (168), Expect = 2e-10 Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 2/154 (1%) Frame = +2 Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202 +G + +L+VSPERL SE F +R + Sbjct: 104 QGRIKLLYVSPERLDSESFRYSLR-----------------------------------Q 128 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 +P++L+ +DEAHCIS+W H+FRP+YL LA+ + P ++ALTATA+ Sbjct: 129 MPIALLAVDEAHCISQWGHDFRPSYLRLAETID-----------NWEQKPTIVALTATAT 177 Query: 383 VATAAAITSALRTP--TVVASDVARTNLQLSIVR 478 A I + L P V + AR NL +V+ Sbjct: 178 PKVAEDIENLLSIPAENQVKTGFARENLAFQVVK 211 [54][TOP] >UniRef100_C9A4Z6 ATP-dependent DNA helicase RecQ n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9A4Z6_ENTCA Length = 588 Score = 69.3 bits (168), Expect = 2e-10 Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 2/154 (1%) Frame = +2 Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202 +G + +L+VSPERL SE F +R + Sbjct: 104 QGRIKLLYVSPERLDSEAFRYSLR-----------------------------------Q 128 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 +P++L+ +DEAHCIS+W H+FRP+YL LA+ + P ++ALTATA+ Sbjct: 129 MPIALLAVDEAHCISQWGHDFRPSYLRLAETID-----------NWEQKPTIVALTATAT 177 Query: 383 VATAAAITSALRTP--TVVASDVARTNLQLSIVR 478 A I + L P V + AR NL +V+ Sbjct: 178 PKVAEDIENLLSIPAENQVKTGFARENLAFQVVK 211 [55][TOP] >UniRef100_C8KDR2 ATP-dependent DNA helicase RecQ n=2 Tax=Listeria monocytogenes RepID=C8KDR2_LISMO Length = 590 Score = 69.3 bits (168), Expect = 2e-10 Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 2/103 (1%) Frame = +2 Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379 +VP+SL +DEAHCIS+W H+FRP+YL L D+L P V+ALTATA Sbjct: 129 QVPISLFAIDEAHCISQWGHDFRPSYLTLCDSLD-----------KMTRRPLVIALTATA 177 Query: 380 SVATAAAITSAL--RTPTVVASDVARTNLQLSIVRAPTVDAKL 502 + A + I L R +VV + +R NL +V+ D L Sbjct: 178 TQAVSDDICRLLKIRADSVVKTGFSRDNLAFQVVKGQDKDKYL 220 [56][TOP] >UniRef100_C8JS99 ATP-dependent DNA helicase RecQ n=2 Tax=Listeria monocytogenes RepID=C8JS99_LISMO Length = 590 Score = 69.3 bits (168), Expect = 2e-10 Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 2/103 (1%) Frame = +2 Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379 +VP+SL +DEAHCIS+W H+FRP+YL L D+L P V+ALTATA Sbjct: 129 QVPISLFAIDEAHCISQWGHDFRPSYLTLCDSLD-----------KMTRRPLVIALTATA 177 Query: 380 SVATAAAITSAL--RTPTVVASDVARTNLQLSIVRAPTVDAKL 502 + A + I L R +VV + +R NL +V+ D L Sbjct: 178 TQAVSDDICRLLKIRADSVVKTGFSRDNLAFQVVKGQDKDKYL 220 [57][TOP] >UniRef100_C6VN17 ATP-dependent DNA helicase RecQ n=2 Tax=Lactobacillus plantarum RepID=C6VN17_LACPJ Length = 602 Score = 69.3 bits (168), Expect = 2e-10 Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 2/100 (2%) Frame = +2 Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379 R+P+ L+ +DEAHCIS+W H+FRP+YL L+ A+ P P VLALTATA Sbjct: 131 RLPIQLLAIDEAHCISQWGHDFRPSYLALSTAIEQLPTH-----------PQVLALTATA 179 Query: 380 SVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVD 493 + AA I A+ V + AR NL L++V+ D Sbjct: 180 TEQVAADICGRLAIDPQHEVNTGFARDNLDLTVVKDQDTD 219 [58][TOP] >UniRef100_Q7UHG1 ATP-dependent DNA helicase RecQ n=1 Tax=Rhodopirellula baltica RepID=Q7UHG1_RHOBA Length = 560 Score = 68.9 bits (167), Expect = 2e-10 Identities = 43/109 (39%), Positives = 59/109 (54%), Gaps = 2/109 (1%) Frame = +2 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 V V L+V+DEAHC+S+W H+FRP YL L R P + ALTATAS Sbjct: 204 VGVGLMVVDEAHCVSQWGHDFRPDYLCLPSI------------RERLGNPPLAALTATAS 251 Query: 383 VATAAAITSALR--TPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 T + +LR PT+V + + R NL++ +VR + + KL L R L Sbjct: 252 ERTLDEVRCSLRLNDPTIVRTGIDRPNLRIEVVRCYSAEDKLKQLHRAL 300 [59][TOP] >UniRef100_Q2IMJ3 LigA n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IMJ3_ANADE Length = 808 Score = 68.9 bits (167), Expect = 2e-10 Identities = 70/190 (36%), Positives = 73/190 (38%), Gaps = 20/190 (10%) Frame = +1 Query: 10 GAAARGGGGRAVCVPRAAAE*AVCLVYARPRDDRRRRRSRRRHRRHRRR*RRGRRRRPGG 189 G AR GGR PRAAA ARPR RR R RR RRR RRR P Sbjct: 75 GGLARPAGGRERATPRAAAGGVRRGRRARPR---RRARRRRHPAARRRRAPSARRRAPPA 131 Query: 190 PRPPGARVPRCAGRGPLHL*VVP*LPPRVPAPGRRAARLAWQP--------------PLP 327 P AR P G G P P RRA RLA + P P Sbjct: 132 APAPAARRPARQGEGGQR--------HPTPRPRRRARRLAARSRAAEGHARGEARVLPRP 183 Query: 328 PPRVPSRAGGAGADRHRQ---RGHRGGHHVGAAHANSGGE---RRGADQPAAVHSPRAHR 489 PR R GAGA RHR+ RG R A A G RR A A P R Sbjct: 184 APRA-RRVPGAGARRHRRDEGRGGRARRRARPARARPRGRARPRRRARGAAGRGRPGRRR 242 Query: 490 GRQAPAPPPA 519 +AP PPA Sbjct: 243 AGRAPRGPPA 252 Score = 60.1 bits (144), Expect = 9e-08 Identities = 62/172 (36%), Positives = 66/172 (38%), Gaps = 4/172 (2%) Frame = +1 Query: 10 GAAARGGGGRAVCVPRAAAE*AVCLVYARPRDDRRRRRSRRRHRRHRRR*RRGRRRRPGG 189 G A R GGGR PR R RRRR+RRR R RR G R GG Sbjct: 403 GPARRRGGGRRA--PRRGGR-------GRGARPGRRRRARRRARADRRA---GGRAGRGG 450 Query: 190 --PRPPGARVPRCAGRGPLHL*VVP*LPPRVPAPGRRAARLAWQPPLPPPRVPSRAGGAG 363 R G P AGRGP RVP GRRA R +P PR +R G Sbjct: 451 RDARGAGGGAPAGAGRGPRVRPEGRRRRARVPGQGRRAGRR--RPAHRRPRGRARRGARL 508 Query: 364 ADRHRQRGHRGGHHVGAAHANSGGERRGADQPAAVHSPRA--HRGRQAPAPP 513 H +R GG G A RR A A RA RGR PP Sbjct: 509 GGGHARRAGAGGERAGRGRAEGRAGRRRARPARARGGDRAPGRRGRAGARPP 560 [60][TOP] >UniRef100_C5D1T8 ATP-dependent DNA helicase, RecQ family n=1 Tax=Variovorax paradoxus S110 RepID=C5D1T8_VARPS Length = 590 Score = 68.9 bits (167), Expect = 2e-10 Identities = 54/174 (31%), Positives = 75/174 (43%), Gaps = 2/174 (1%) Frame = +2 Query: 8 EGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPG 187 + + +G+ V+F +PERL F + ++ H Sbjct: 129 QAAIADGSARVIFSTPERLADADFLALLQRH----------------------------- 159 Query: 188 GRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLAL 367 P SL+V+DEAHCIS+W H+FRPAYL L A+ R H P VLAL Sbjct: 160 ------PTSLLVVDEAHCISQWGHDFRPAYLELGAAV-----------RALNH-PVVLAL 201 Query: 368 TATASVATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 TATA+ A I L P +V + R NL ++ A + KL L L+ Sbjct: 202 TATANGEVAGEIMEKLGIPRAGLVDTGAYRPNLHYAVEPAMREEDKLRRALALV 255 [61][TOP] >UniRef100_Q2BM74 RecQ domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BM74_9GAMM Length = 653 Score = 68.9 bits (167), Expect = 2e-10 Identities = 53/165 (32%), Positives = 72/165 (43%), Gaps = 2/165 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L +S ER +ERF F+R+ V Sbjct: 104 GKIKILMISVERFKNERFREFIRS-----------------------------------V 128 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS- 382 PVS++V+DEAHCISEW HNFRP YL L R + P VL LTATA+ Sbjct: 129 PVSMLVVDEAHCISEWGHNFRPDYLKLPSY------------RNELNIPLVLLLTATATR 176 Query: 383 -VATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLL 514 V A A++ +VV + R+NL + ++ P D LL Sbjct: 177 KVKRDMAERFAIKPESVVQTGFYRSNLDIRVL--PVADKNRDQLL 219 [62][TOP] >UniRef100_B9TNI6 DNA helicase recq, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TNI6_RICCO Length = 266 Score = 68.9 bits (167), Expect = 2e-10 Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 2/156 (1%) Frame = +2 Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196 ++EG +++F +PERL F ++A Sbjct: 158 IVEGRCEIVFCTPERLTLPGFVDVLKA--------------------------------- 184 Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376 V ++LVV+DEAHCIS+W H+FRPAYL +A A+ + P VLALTAT Sbjct: 185 --VKIALVVVDEAHCISQWGHDFRPAYLEMAGAIE------------ALGRPPVLALTAT 230 Query: 377 ASVATAAAITSALRTP--TVVASDVARTNLQLSIVR 478 A+ I L P V+ + + R NLQ ++V+ Sbjct: 231 ATEDVVDDIGRQLNRPRMNVINTGIYRPNLQYAVVQ 266 [63][TOP] >UniRef100_C7YCE6 ATP-dependent DNA helicase RecQ n=1 Tax=Enterococcus faecalis T8 RepID=C7YCE6_ENTFA Length = 596 Score = 68.6 bits (166), Expect = 3e-10 Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Frame = +2 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+ Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177 Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I LR P+ + + AR NL +V+ D L L++ Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225 [64][TOP] >UniRef100_C7WZZ4 ATP-dependent DNA helicase n=1 Tax=Enterococcus faecalis Merz96 RepID=C7WZZ4_ENTFA Length = 589 Score = 68.6 bits (166), Expect = 3e-10 Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Frame = +2 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+ Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177 Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I LR P+ + + AR NL +V+ D L L++ Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225 [65][TOP] >UniRef100_C7WQV6 ATP-dependent DNA helicase n=1 Tax=Enterococcus faecalis AR01/DG RepID=C7WQV6_ENTFA Length = 589 Score = 68.6 bits (166), Expect = 3e-10 Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Frame = +2 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+ Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177 Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I LR P+ + + AR NL +V+ D L L++ Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225 [66][TOP] >UniRef100_C7W0X8 ATP-dependent DNA helicase n=1 Tax=Enterococcus faecalis E1Sol RepID=C7W0X8_ENTFA Length = 589 Score = 68.6 bits (166), Expect = 3e-10 Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Frame = +2 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+ Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177 Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I LR P+ + + AR NL +V+ D L L++ Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225 [67][TOP] >UniRef100_C7VTV3 ATP-dependent DNA helicase n=1 Tax=Enterococcus faecalis Fly1 RepID=C7VTV3_ENTFA Length = 589 Score = 68.6 bits (166), Expect = 3e-10 Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Frame = +2 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+ Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177 Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I LR P+ + + AR NL +V+ D L L++ Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225 [68][TOP] >UniRef100_C7VJ37 ATP-dependent DNA helicase n=1 Tax=Enterococcus faecalis HIP11704 RepID=C7VJ37_ENTFA Length = 589 Score = 68.6 bits (166), Expect = 3e-10 Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Frame = +2 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+ Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177 Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I LR P+ + + AR NL +V+ D L L++ Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225 [69][TOP] >UniRef100_C7UMW6 ATP-dependent DNA helicase recQ n=1 Tax=Enterococcus faecalis X98 RepID=C7UMW6_ENTFA Length = 589 Score = 68.6 bits (166), Expect = 3e-10 Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Frame = +2 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+ Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177 Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I LR P+ + + AR NL +V+ D L L++ Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225 [70][TOP] >UniRef100_C7UBF3 ATP-dependent DNA helicase (Fragment) n=1 Tax=Enterococcus faecalis ATCC 4200 RepID=C7UBF3_ENTFA Length = 492 Score = 68.6 bits (166), Expect = 3e-10 Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Frame = +2 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+ Sbjct: 32 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 80 Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I LR P+ + + AR NL +V+ D L L++ Sbjct: 81 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 128 [71][TOP] >UniRef100_C7U7U1 ATP-dependent DNA helicase n=1 Tax=Enterococcus faecalis T3 RepID=C7U7U1_ENTFA Length = 589 Score = 68.6 bits (166), Expect = 3e-10 Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Frame = +2 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+ Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177 Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I LR P+ + + AR NL +V+ D L L++ Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225 [72][TOP] >UniRef100_C7R3L1 ATP-dependent DNA helicase, RecQ family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R3L1_JONDD Length = 788 Score = 68.6 bits (166), Expect = 3e-10 Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 1/167 (0%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 I+ ++ G VD+L +SPERL + +F + G Sbjct: 183 IQEQIASGGVDLLLISPERLNNPQFVHDVLPSLAQSAG---------------------- 220 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHG-SPGSRLFPPRGSPHAPAVL 361 LVV+DEAHC+S+W H+FRP Y + D L PG + + + + Sbjct: 221 ----------LVVVDEAHCVSDWGHDFRPDYRRIRDVLASLPPGCPVLATTATANERVTV 270 Query: 362 ALTATASVATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKL 502 + A + A+AA S + TV+ ++ RT+L L++V PT +L Sbjct: 271 DVAAQLAEASAAPDGSDATSVTVIRGNLERTSLHLAVVTLPTAVDRL 317 [73][TOP] >UniRef100_C7D1J0 ATP-dependent DNA helicase n=1 Tax=Enterococcus faecalis T2 RepID=C7D1J0_ENTFA Length = 589 Score = 68.6 bits (166), Expect = 3e-10 Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Frame = +2 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+ Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177 Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I LR P+ + + AR NL +V+ D L L++ Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225 [74][TOP] >UniRef100_C2JP17 Possible ATP-dependent DNA helicase RecQ (Fragment) n=1 Tax=Enterococcus faecalis HH22 RepID=C2JP17_ENTFA Length = 271 Score = 68.6 bits (166), Expect = 3e-10 Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Frame = +2 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+ Sbjct: 62 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 110 Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I LR P+ + + AR NL +V+ D L L++ Sbjct: 111 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 158 [75][TOP] >UniRef100_C2H342 ATP-dependent DNA helicase RecQ n=9 Tax=Enterococcus faecalis RepID=C2H342_ENTFA Length = 589 Score = 68.6 bits (166), Expect = 3e-10 Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Frame = +2 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+ Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177 Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I LR P+ + + AR NL +V+ D L L++ Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225 [76][TOP] >UniRef100_C2DAS7 ATP-dependent DNA helicase RecQ n=1 Tax=Enterococcus faecalis TX1322 RepID=C2DAS7_ENTFA Length = 589 Score = 68.6 bits (166), Expect = 3e-10 Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Frame = +2 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+ Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177 Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I LR P+ + + AR NL +V+ D L L++ Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225 [77][TOP] >UniRef100_C0X8H1 ATP-dependent DNA helicase RecQ n=1 Tax=Enterococcus faecalis TX0104 RepID=C0X8H1_ENTFA Length = 589 Score = 68.6 bits (166), Expect = 3e-10 Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Frame = +2 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+ Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177 Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I LR P+ + + AR NL +V+ D L L++ Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225 [78][TOP] >UniRef100_UPI0001B43671 ATP-dependent DNA helicase n=1 Tax=Listeria monocytogenes FSL J1-175 RepID=UPI0001B43671 Length = 243 Score = 68.2 bits (165), Expect = 3e-10 Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 2/103 (1%) Frame = +2 Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379 +VP+SL +DEAHCIS+W H+FRP+YL L D+L P V+ALTATA Sbjct: 129 QVPISLFAIDEAHCISQWGHDFRPSYLTLCDSLD-----------KMTRRPLVIALTATA 177 Query: 380 SVATAAAITSALR--TPTVVASDVARTNLQLSIVRAPTVDAKL 502 + A + I L+ +VV + +R NL +V+ D L Sbjct: 178 TQAVSDDICRLLKIGADSVVKTGFSRDNLAFQVVKGQDKDKYL 220 [79][TOP] >UniRef100_UPI00016964BB ATP-dependent DNA helicase n=1 Tax=Listeria monocytogenes FSL N1-017 RepID=UPI00016964BB Length = 590 Score = 68.2 bits (165), Expect = 3e-10 Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 2/103 (1%) Frame = +2 Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379 +VP+SL +DEAHCIS+W H+FRP+YL L D+L P V+ALTATA Sbjct: 129 QVPISLFAIDEAHCISQWGHDFRPSYLTLCDSLD-----------KMTRRPLVIALTATA 177 Query: 380 SVATAAAITSALR--TPTVVASDVARTNLQLSIVRAPTVDAKL 502 + A + I L+ +VV + +R NL +V+ D L Sbjct: 178 TQAVSDDICRLLKIGADSVVKTGFSRDNLAFQVVKGQDKDKYL 220 [80][TOP] >UniRef100_Q03PQ4 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03PQ4_LACBA Length = 591 Score = 68.2 bits (165), Expect = 3e-10 Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 2/100 (2%) Frame = +2 Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379 R+P+ L+ +DEAHCIS+W H+FRP+YL L+ A+ P P VLALTATA Sbjct: 130 RLPIDLLAVDEAHCISQWGHDFRPSYLTLSHAIEQLPSQ-----------PQVLALTATA 178 Query: 380 SVATAAAITSAL--RTPTVVASDVARTNLQLSIVRAPTVD 493 + A I L V + AR NL L++V+ D Sbjct: 179 TTQVAHDICQQLWIDPQNEVNTGFARDNLNLTVVKDQDTD 218 [81][TOP] >UniRef100_B8DD57 ATP-dependent DNA helicase RecQ n=1 Tax=Listeria monocytogenes HCC23 RepID=B8DD57_LISMH Length = 590 Score = 68.2 bits (165), Expect = 3e-10 Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 2/103 (1%) Frame = +2 Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379 +VP+SL +DEAHCIS+W H+FRP+YL L D+L P V+ALTATA Sbjct: 129 QVPISLFAIDEAHCISQWGHDFRPSYLTLCDSLD-----------KMTRRPLVIALTATA 177 Query: 380 SVATAAAITSALR--TPTVVASDVARTNLQLSIVRAPTVDAKL 502 + A + I L+ +VV + +R NL +V+ D L Sbjct: 178 TQAVSDDICRLLKIGVDSVVKTGFSRDNLAFQVVKGQDKDKYL 220 [82][TOP] >UniRef100_Q1ZWZ5 Putative putative ATP-dependent DNA helicase RecQ n=1 Tax=Photobacterium angustum S14 RepID=Q1ZWZ5_PHOAS Length = 638 Score = 68.2 bits (165), Expect = 3e-10 Identities = 56/169 (33%), Positives = 75/169 (44%), Gaps = 2/169 (1%) Frame = +2 Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202 +G + VL +S ERL +ERF F+ + Sbjct: 102 QGEIKVLMISVERLKNERFRHFIS-----------------------------------Q 126 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 VP+SL+V+DEAHCISEW HNFRP YL L + S + P VL LTATA+ Sbjct: 127 VPISLLVVDEAHCISEWGHNFRPDYLKLPYY------------QQSLNIPQVLLLTATAT 174 Query: 383 VATAAAITSA--LRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 A + + +V + R NL LSI+ A D KL +L + L Sbjct: 175 PAVINDMQDKFNIAKDDIVVTGFYRKNLDLSILAAQD-DEKLDVLQQQL 222 [83][TOP] >UniRef100_Q71W06 ATP-dependent DNA helicase RecQ n=4 Tax=Listeria monocytogenes RepID=Q71W06_LISMF Length = 590 Score = 68.2 bits (165), Expect = 3e-10 Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 2/103 (1%) Frame = +2 Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379 +VP+SL +DEAHCIS+W H+FRP+YL L D+L P V+ALTATA Sbjct: 129 QVPISLFAIDEAHCISQWGHDFRPSYLTLCDSLD-----------KMTRRPLVIALTATA 177 Query: 380 SVATAAAITSALR--TPTVVASDVARTNLQLSIVRAPTVDAKL 502 + A + I L+ +VV + +R NL +V+ D L Sbjct: 178 TQAVSDDICRLLKIGADSVVKTGFSRDNLAFQVVKGQDKDKYL 220 [84][TOP] >UniRef100_C7MZP8 ATP-dependent DNA helicase RecQ n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MZP8_SACVD Length = 607 Score = 68.2 bits (165), Expect = 3e-10 Identities = 57/171 (33%), Positives = 75/171 (43%), Gaps = 2/171 (1%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 +E L G +D+L+++PERL SE + Sbjct: 100 VEAEFLAGELDLLYLAPERLRSEATMRLIE------------------------------ 129 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 R PVS+ +DEAHC+++W H+FRP YL L S+L R P P V A Sbjct: 130 -----RGPVSVFAIDEAHCVAQWGHDFRPDYLEL---------SKLSERR--PDVPRV-A 172 Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLL 511 LTATA+ AT A IT+ L V S R N+Q IV P D + LL Sbjct: 173 LTATATPATRAEITTRLGLENARVFVSSFDRPNIQYRIV--PKKDPRRQLL 221 [85][TOP] >UniRef100_C2GGN1 ATP-dependent DNA helicase n=1 Tax=Corynebacterium glucuronolyticum ATCC 51866 RepID=C2GGN1_9CORY Length = 694 Score = 68.2 bits (165), Expect = 3e-10 Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 1/173 (0%) Frame = +2 Query: 8 EGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPG 187 E + G VDVL +SPERL++ F + + + G G Sbjct: 110 EAAIRSGQVDVLLISPERLVNPDFREKILPYLIVGLG----------------------- 146 Query: 188 GRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLAL 367 +VV+DEAHCIS+W H+FRP Y + + L+ S L P G+P VLA Sbjct: 147 ---------MVVVDEAHCISDWGHDFRPDYRRIQELLN----SDLDP--GTP----VLAT 187 Query: 368 TATASVATAAAITSALRTPT-VVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 TATA+ A + S L T V+ + RT+L LS+V A+ + +L Sbjct: 188 TATANDRVVADVVSQLGPDTGVIRGGLDRTSLHLSVVHLDDPTARAAWIAGIL 240 [86][TOP] >UniRef100_C1ZPJ3 ATP-dependent DNA helicase, RecQ family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=C1ZPJ3_RHOMR Length = 505 Score = 68.2 bits (165), Expect = 3e-10 Identities = 52/166 (31%), Positives = 72/166 (43%), Gaps = 2/166 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 GA +L+V+PE+L + RF + RA R+ Sbjct: 34 GAYRLLYVTPEQLTTARFEA-----------------------------------RAGRL 58 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 V+L+ +DEAHC+SEW FRPAYLHL +A R P +LALTATA+ Sbjct: 59 RVALLAVDEAHCVSEWGPQFRPAYLHLPEA------------RRQLGDPPLLALTATATP 106 Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 I ALRTP ++ R NL S+ ++ +LR Sbjct: 107 RVRQDIVEKLALRTPRIIVRGFDRPNLVWSVFETADKAERVRAVLR 152 [87][TOP] >UniRef100_C0VQY9 ATP-dependent DNA helicase n=1 Tax=Corynebacterium glucuronolyticum ATCC 51867 RepID=C0VQY9_9CORY Length = 694 Score = 68.2 bits (165), Expect = 3e-10 Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 1/173 (0%) Frame = +2 Query: 8 EGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPG 187 E + G VDVL +SPERL++ F + + + G G Sbjct: 110 EAAIRSGQVDVLLISPERLVNPDFREKILPYLIVGLG----------------------- 146 Query: 188 GRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLAL 367 +VV+DEAHCIS+W H+FRP Y + + L+ S L P G+P VLA Sbjct: 147 ---------MVVVDEAHCISDWGHDFRPDYRRIQELLN----SDLDP--GTP----VLAT 187 Query: 368 TATASVATAAAITSALRTPT-VVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 TATA+ A + S L T V+ + RT+L LS+V A+ + +L Sbjct: 188 TATANDRVVADVVSQLGPDTGVIRGGLDRTSLHLSVVHLDDPTARAAWIAGIL 240 [88][TOP] >UniRef100_A6CHS6 ATP-dependent DNA helicase recQ n=1 Tax=Bacillus sp. SG-1 RepID=A6CHS6_9BACI Length = 707 Score = 68.2 bits (165), Expect = 3e-10 Identities = 48/163 (29%), Positives = 71/163 (43%), Gaps = 5/163 (3%) Frame = +2 Query: 5 IEGRLLE---GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGG 175 IE RL E G +++++PERL S F ++R Sbjct: 97 IERRLSEAELGVYKLIYIAPERLESPYFVQYLR--------------------------- 129 Query: 176 DGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPA 355 +P+ LV +DEAHCIS+W H+FRP+YL + D L G P + P Sbjct: 130 --------NLPIPLVAVDEAHCISQWGHDFRPSYLKIKDLLKGLPSN-----------PV 170 Query: 356 VLALTATASVATAAAITSAL--RTPTVVASDVARTNLQLSIVR 478 VLALTATA+ I ++L + +R NL +++ Sbjct: 171 VLALTATATPQVQNDICASLEIEEENTFITGFSRENLSFKVIK 213 [89][TOP] >UniRef100_UPI0001976EF0 ATP-dependent DNA helicase RecQ n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI0001976EF0 Length = 670 Score = 67.8 bits (164), Expect = 4e-10 Identities = 46/157 (29%), Positives = 67/157 (42%), Gaps = 2/157 (1%) Frame = +2 Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202 +G + +L+V+PERL +ERF +F A R Sbjct: 111 QGDIKLLYVAPERLETERFRNF-----------------------------------ATR 135 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 VP+SLV +DEAHC+S+W +FR +YL + + + G P P V A TATA+ Sbjct: 136 VPISLVAVDEAHCVSQWGQDFRSSYLGIGEFIAGLPA-----------RPTVAAFTATAT 184 Query: 383 VATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPT 487 I L P V + R NL +++ T Sbjct: 185 ERVRCDIIGILGLNAPQVTVTGFDRENLYFDVLKIET 221 [90][TOP] >UniRef100_UPI00016E7C7A UPI00016E7C7A related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E7C7A Length = 1231 Score = 67.8 bits (164), Expect = 4e-10 Identities = 56/172 (32%), Positives = 71/172 (41%), Gaps = 4/172 (2%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 ++ G V VL +SPE L+ GGGG G G + Sbjct: 594 KVKSGQVCVLLLSPEALV---------------GGGGSGSGCLPSAQ------------- 625 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 PV+ +DEAHC+SEWSHNFRP YL L L G + F L LTA Sbjct: 626 -ELPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRERLGVQCF-----------LGLTA 673 Query: 374 TASVATAAAITSAL----RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 TA+++TA I L + V S NL LS+ D L LL+ Sbjct: 674 TATLSTALDIARHLDIRNQDGIAVRSAAVPPNLHLSVSMDREKDQALVSLLK 725 [91][TOP] >UniRef100_UPI00016E7C64 UPI00016E7C64 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E7C64 Length = 1216 Score = 67.8 bits (164), Expect = 4e-10 Identities = 56/172 (32%), Positives = 71/172 (41%), Gaps = 4/172 (2%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 ++ G V VL +SPE L+ GGGG G G + Sbjct: 568 KVKSGQVCVLLLSPEALV---------------GGGGSGSGCLPSAQ------------- 599 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 PV+ +DEAHC+SEWSHNFRP YL L L G + F L LTA Sbjct: 600 -ELPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRERLGVQCF-----------LGLTA 647 Query: 374 TASVATAAAITSAL----RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 TA+++TA I L + V S NL LS+ D L LL+ Sbjct: 648 TATLSTALDIARHLDIRNQDGIAVRSAAVPPNLHLSVSMDREKDQALVSLLK 699 [92][TOP] >UniRef100_UPI00016E7C63 UPI00016E7C63 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E7C63 Length = 1484 Score = 67.8 bits (164), Expect = 4e-10 Identities = 56/172 (32%), Positives = 71/172 (41%), Gaps = 4/172 (2%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 ++ G V VL +SPE L+ GGGG G G + Sbjct: 772 KVKSGQVCVLLLSPEALV---------------GGGGSGSGCLPSAQ------------- 803 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 PV+ +DEAHC+SEWSHNFRP YL L L G + F L LTA Sbjct: 804 -ELPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRERLGVQCF-----------LGLTA 851 Query: 374 TASVATAAAITSAL----RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 TA+++TA I L + V S NL LS+ D L LL+ Sbjct: 852 TATLSTALDIARHLDIRNQDGIAVRSAAVPPNLHLSVSMDREKDQALVSLLK 903 [93][TOP] >UniRef100_Q9KCG4 ATP-dependent DNA helicase n=1 Tax=Bacillus halodurans RepID=Q9KCG4_BACHD Length = 491 Score = 67.8 bits (164), Expect = 4e-10 Identities = 41/109 (37%), Positives = 56/109 (51%), Gaps = 2/109 (1%) Frame = +2 Query: 191 RAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALT 370 R +V VS V+DEAHCIS+W H+FRP +L L+D H P LALT Sbjct: 123 RLKQVKVSYFVVDEAHCISQWGHDFRPDFLRLSDVKHQLGN------------PPCLALT 170 Query: 371 ATASVATAAAITSALR--TPTVVASDVARTNLQLSIVRAPTVDAKLPLL 511 ATA+ A I + L + V R N+ +S+ + PTV KL ++ Sbjct: 171 ATATPAVQQDILTQLSIDEAVTIVHSVDRPNISISVEQTPTVKDKLEVI 219 [94][TOP] >UniRef100_Q926Z0 Lin2900 protein n=1 Tax=Listeria innocua RepID=Q926Z0_LISIN Length = 590 Score = 67.8 bits (164), Expect = 4e-10 Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 2/103 (1%) Frame = +2 Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379 +VP+SL +DEAHCIS+W H+FRP+YL L D+L P V+ALTATA Sbjct: 129 QVPISLFAIDEAHCISQWGHDFRPSYLSLCDSLD-----------KMTRRPLVIALTATA 177 Query: 380 SVATAAAITSALRTP--TVVASDVARTNLQLSIVRAPTVDAKL 502 + A + I L+ +V+ + +R NL +V+ D L Sbjct: 178 TQAVSDDICRLLKIKPNSVIKTGFSRDNLAFQVVKGQDKDKYL 220 [95][TOP] >UniRef100_B4SD05 ATP-dependent DNA helicase RecQ n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SD05_PELPB Length = 599 Score = 67.8 bits (164), Expect = 4e-10 Identities = 54/170 (31%), Positives = 75/170 (44%), Gaps = 2/170 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 RLL G +D+L+++PER + F + Sbjct: 98 RLLSGKLDLLYLAPERFILSHFREILG--------------------------------- 124 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 +V +S+ V+DEAHCISEW H+FRP YL L+D + LF G P V A TA Sbjct: 125 --QVQLSMAVIDEAHCISEWGHDFRPDYLSLSDLV------TLF--AGIP----VAAFTA 170 Query: 374 TASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 TA+ I ALR P +V + R NL + V+A+L LL+ Sbjct: 171 TATTRVQQDILDKLALRNPLIVRASFDRPNLLYDVRFKDNVEAQLLSLLK 220 [96][TOP] >UniRef100_C0EDK9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDK9_9CLOT Length = 613 Score = 67.8 bits (164), Expect = 4e-10 Identities = 47/151 (31%), Positives = 65/151 (43%), Gaps = 2/151 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 GA +L+V+PERLL++ F SF A Sbjct: 111 GAYKILYVAPERLLTDEFLSF-----------------------------------ACSC 135 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 +SLV +DEAHC+S+W +FRP+YL + D + R P P V A TATA+ Sbjct: 136 EISLVSVDEAHCVSQWGQDFRPSYLKILDFI-----------RALPSRPVVAAFTATATA 184 Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSI 472 I LR+PT+V + R NL + Sbjct: 185 QVREDIVRILELRSPTLVTTGFDRKNLYFEV 215 [97][TOP] >UniRef100_UPI0000E5E124 RecQ protein-like 4 n=1 Tax=Homo sapiens RepID=UPI0000E5E124 Length = 1208 Score = 67.4 bits (163), Expect = 6e-10 Identities = 45/121 (37%), Positives = 57/121 (47%), Gaps = 3/121 (2%) Frame = +2 Query: 164 GAGGDGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSP 343 GAGG P + P PV+ +DEAHC+S+WSHNFRP YL + L G F Sbjct: 586 GAGGLPPAAQLP--PVAFACIDEAHCLSQWSHNFRPCYLRVCKVLRERMGVHCF------ 637 Query: 344 HAPAVLALTATASVATAAAITSAL---RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLL 514 L LTATA+ TA+ + L P + TNL LS+ D L LL Sbjct: 638 -----LGLTATATRRTASDVAQHLAVAEEPDLHGPAPVPTNLHLSVSMDRDTDQALLTLL 692 Query: 515 R 517 + Sbjct: 693 Q 693 [98][TOP] >UniRef100_Q8DBI6 DNA helicase n=1 Tax=Vibrio vulnificus RepID=Q8DBI6_VIBVU Length = 639 Score = 67.4 bits (163), Expect = 6e-10 Identities = 52/168 (30%), Positives = 73/168 (43%), Gaps = 2/168 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L +S ERL +ERF F+ +V Sbjct: 106 GEIKILMISVERLKNERFRQFIA-----------------------------------QV 130 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+SL+V+DEAHCISEW HNFRP YL L + + + P VL LTATA+ Sbjct: 131 PISLLVVDEAHCISEWGHNFRPDYLKLPSY------------QATLNIPQVLLLTATATE 178 Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 A + A++ VV + R NL L + D K LL+++ Sbjct: 179 NVIADMQRKFAIKKDNVVVTGFYRANLDLHVTPCRNED-KADALLKIV 225 [99][TOP] >UniRef100_Q7MID7 DNA helicase n=1 Tax=Vibrio vulnificus YJ016 RepID=Q7MID7_VIBVY Length = 704 Score = 67.4 bits (163), Expect = 6e-10 Identities = 52/168 (30%), Positives = 73/168 (43%), Gaps = 2/168 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L +S ERL +ERF F+ +V Sbjct: 171 GEIKILMISVERLKNERFRQFIA-----------------------------------QV 195 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+SL+V+DEAHCISEW HNFRP YL L + + + P VL LTATA+ Sbjct: 196 PISLLVVDEAHCISEWGHNFRPDYLKLPSY------------QATLNIPQVLLLTATATE 243 Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 A + A++ VV + R NL L + D K LL+++ Sbjct: 244 NVIADMQRKFAIKKDNVVVTGFYRANLDLHVTPCRNED-KADALLKIV 290 [100][TOP] >UniRef100_Q4KJZ8 ATP-dependent DNA helicase, RecQ family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KJZ8_PSEF5 Length = 644 Score = 67.4 bits (163), Expect = 6e-10 Identities = 51/158 (32%), Positives = 70/158 (44%), Gaps = 2/158 (1%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 + R G + +L +S ERL +ERF +F++ Sbjct: 95 VMARARSGELKILMISVERLKNERFRNFLQ------------------------------ 124 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 +VP+SL+V+DEAHCISEW HNFRP YL L D R F + P L Sbjct: 125 -----QVPISLLVVDEAHCISEWGHNFRPDYLKLPDY------QRQF------NIPQALL 167 Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSI 472 LTATA+ A + + A+ VV + R NL L + Sbjct: 168 LTATATPKVIADMQAKFAIAQQDVVTTGFYRPNLNLLV 205 [101][TOP] >UniRef100_C6D8B1 ATP-dependent DNA helicase RecQ n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8B1_PAESJ Length = 721 Score = 67.4 bits (163), Expect = 6e-10 Identities = 39/91 (42%), Positives = 52/91 (57%), Gaps = 2/91 (2%) Frame = +2 Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388 + ++ +DEAHC+S+W H+FRP+Y LA G G P+ P V A TATA+ Sbjct: 132 IPMIAIDEAHCVSQWGHDFRPSYRQLA----GWIGK-------MPNRPLVAAFTATATQE 180 Query: 389 TAAAITS--ALRTPTVVASDVARTNLQLSIV 475 AA IT+ LR P V + AR NL LS+V Sbjct: 181 VAADITAMLGLREPNVFVTGFARPNLSLSVV 211 [102][TOP] >UniRef100_C7N3V8 ATP-dependent DNA helicase RecQ n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N3V8_SLAHD Length = 626 Score = 67.4 bits (163), Expect = 6e-10 Identities = 51/171 (29%), Positives = 71/171 (41%), Gaps = 2/171 (1%) Frame = +2 Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196 +++G+V +L+VSPERL +E F Sbjct: 107 VMDGSVKLLYVSPERLETEEFRDL-----------------------------------C 131 Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376 P ++ +DEAHCIS+W H+FRP+Y+ L + P P V A TAT Sbjct: 132 ANFPPQMIAIDEAHCISQWGHDFRPSYMRLRRFI-----------ESLPQRPPVCAFTAT 180 Query: 377 ASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 A+ I ALR P V + R NL+ S++R P K LL LL Sbjct: 181 ATERVRQDILEQLALRDPFTVVASFDRPNLRFSVIR-PRERDKDKRLLELL 230 [103][TOP] >UniRef100_C1ZWP8 ATP-dependent DNA helicase, RecQ family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=C1ZWP8_RHOMR Length = 1263 Score = 67.4 bits (163), Expect = 6e-10 Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 4/112 (3%) Frame = +2 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 A R+P+SL V+DEAHC+SEW H+FRP+YLH+ L S + P ++ALT Sbjct: 625 AARLPISLAVVDEAHCVSEWGHDFRPSYLHMTHNLQKFCAS-------AASRPTLVALTG 677 Query: 374 TASVATAAAITSAL----RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 TAS A I + L + V+ R ++ + R P +AK+ L R Sbjct: 678 TASFAVLTDIQAELGITDESAIVLPRSFDRKEIRFHVERVPR-EAKMHALKR 728 [104][TOP] >UniRef100_C9JFV7 Putative uncharacterized protein RECQL4 n=1 Tax=Homo sapiens RepID=C9JFV7_HUMAN Length = 1207 Score = 67.4 bits (163), Expect = 6e-10 Identities = 45/121 (37%), Positives = 57/121 (47%), Gaps = 3/121 (2%) Frame = +2 Query: 164 GAGGDGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSP 343 GAGG P + P PV+ +DEAHC+S+WSHNFRP YL + L G F Sbjct: 586 GAGGLPPAAQLP--PVAFACIDEAHCLSQWSHNFRPCYLRVCKVLRERMGVHCF------ 637 Query: 344 HAPAVLALTATASVATAAAITSAL---RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLL 514 L LTATA+ TA+ + L P + TNL LS+ D L LL Sbjct: 638 -----LGLTATATRRTASDVAQHLAVAEEPDLHGPAPVPTNLHLSVSMDRDTDQALLTLL 692 Query: 515 R 517 + Sbjct: 693 Q 693 [105][TOP] >UniRef100_O94761 ATP-dependent DNA helicase Q4 n=1 Tax=Homo sapiens RepID=RECQ4_HUMAN Length = 1208 Score = 67.4 bits (163), Expect = 6e-10 Identities = 45/121 (37%), Positives = 57/121 (47%), Gaps = 3/121 (2%) Frame = +2 Query: 164 GAGGDGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSP 343 GAGG P + P PV+ +DEAHC+S+WSHNFRP YL + L G F Sbjct: 586 GAGGLPPAAQLP--PVAFACIDEAHCLSQWSHNFRPCYLRVCKVLRERMGVHCF------ 637 Query: 344 HAPAVLALTATASVATAAAITSAL---RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLL 514 L LTATA+ TA+ + L P + TNL LS+ D L LL Sbjct: 638 -----LGLTATATRRTASDVAQHLAVAEEPDLHGPAPVPTNLHLSVSMDRDTDQALLTLL 692 Query: 515 R 517 + Sbjct: 693 Q 693 [106][TOP] >UniRef100_Q39S39 ATP-dependent DNA helicase RecQ n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39S39_GEOMG Length = 601 Score = 67.0 bits (162), Expect = 7e-10 Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 2/160 (1%) Frame = +2 Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181 ++ RL G +D+L+V+PERL+++ F +R Sbjct: 99 QVLARLHAGELDLLYVAPERLMTDAFLERLR----------------------------- 129 Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361 +PV+L +DEAHC+S+W H+FRP Y+ L L G LFP G P V+ Sbjct: 130 ------EIPVALFAIDEAHCVSQWGHDFRPEYVGLG-RLRG-----LFP--GVP----VI 171 Query: 362 ALTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIV 475 ALTATA V T + I LR V + R N++ ++V Sbjct: 172 ALTATADVQTRSDIIDRLGLRDAQVYVTGFDRPNIRYTVV 211 [107][TOP] >UniRef100_B7GUC2 ATP-dependent DNA helicase RecQ n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GUC2_BIFLI Length = 651 Score = 67.0 bits (162), Expect = 7e-10 Identities = 46/156 (29%), Positives = 65/156 (41%), Gaps = 2/156 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L+V+PERL + RF F A R Sbjct: 108 GQIKLLYVAPERLETGRFRDF-----------------------------------AART 132 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+SL+ +DEAHC+S+W +FR +YL + D + G P P V A TATA+ Sbjct: 133 PISLIAVDEAHCVSQWGQDFRSSYLGIGDFI-----------AGLPQRPPVGAFTATATE 181 Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPT 487 I LR P V + R+NL +V+ T Sbjct: 182 RVRRDIVGLLGLRNPAVTVTGFDRSNLYFDVVKLET 217 [108][TOP] >UniRef100_C1YVB1 ATP-dependent DNA helicase RecQ n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YVB1_NOCDA Length = 723 Score = 67.0 bits (162), Expect = 7e-10 Identities = 52/168 (30%), Positives = 69/168 (41%), Gaps = 6/168 (3%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G VDVL VSPERL + F + G G Sbjct: 129 GRVDVLLVSPERLNNPEFRDRVLPELAAGAG----------------------------- 159 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 LVV+DEAHC+S+W H+FRP Y + LH P G P VLA TATA+ Sbjct: 160 ---LVVIDEAHCVSDWGHDFRPDYRRIRSLLHDL-------PEGVP----VLATTATANE 205 Query: 386 ATAAAITSALRT------PTVVASDVARTNLQLSIVRAPTVDAKLPLL 511 + L+ V+ + R +L+L++VR P A+L L Sbjct: 206 RVTRDVAEQLQAGGERADTLVLRGSLERESLRLAVVRLPDPTARLSWL 253 [109][TOP] >UniRef100_C1WNZ0 Superfamily II DNA helicase n=1 Tax=Kribbella flavida DSM 17836 RepID=C1WNZ0_9ACTO Length = 706 Score = 67.0 bits (162), Expect = 7e-10 Identities = 53/160 (33%), Positives = 74/160 (46%), Gaps = 1/160 (0%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 IE L GA+DVL VSPERL + F + DG AG Sbjct: 114 IENDLRTGAIDVLLVSPERLANPGFGRRVL---------------------DGLAG---- 148 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 + L+V+DEAH +S+W H+FRP Y ++D L + +P P VLA Sbjct: 149 -------QIGLLVIDEAHAVSDWGHDFRPDYRRVSDVLQ----------KLNPQTP-VLA 190 Query: 365 LTATASVATAAAITSALRTPT-VVASDVARTNLQLSIVRA 481 TATA+ + L T V+ +AR++LQL++V A Sbjct: 191 TTATANARVTDDVAHQLGASTLVLRGPLARSSLQLAVVDA 230 [110][TOP] >UniRef100_C0V1H2 ATP-dependent DNA helicase, RecQ family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=C0V1H2_9BACT Length = 532 Score = 67.0 bits (162), Expect = 7e-10 Identities = 45/108 (41%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Frame = +2 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS- 382 PVSL V+DEAHCISEW ++FRP+YL L + + P VLALTATA+ Sbjct: 100 PVSLFVVDEAHCISEWGYDFRPSYLQLGEVVE------------EVGRPPVLALTATATP 147 Query: 383 -VATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 V A T +R P VVA R NL L + R + + +L LL Sbjct: 148 WVRQDIARTLGMRDPLVVAHGFDRPNLFLQVHRLEQHEDERQVLEALL 195 [111][TOP] >UniRef100_Q2H7F2 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2H7F2_CHAGB Length = 747 Score = 67.0 bits (162), Expect = 7e-10 Identities = 55/171 (32%), Positives = 70/171 (40%), Gaps = 2/171 (1%) Frame = +2 Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196 L EG + +L+ +PERL +E F + MR H G Sbjct: 196 LREGKLRILYCAPERLNNEGFVAMMR-HVRGG---------------------------- 226 Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376 V L+ +DEAHCISEW H+FRP YL +A R V+ LTAT Sbjct: 227 ----VRLLAVDEAHCISEWGHSFRPEYLKVARFADEIAAER------------VICLTAT 270 Query: 377 ASVATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 A+ I SA + PT V + R NL L T K PLL + L Sbjct: 271 ATPKVVDDICSAFKIPTEGVFRTSAYRPNLNLHARAVKTKHDKYPLLFQFL 321 [112][TOP] >UniRef100_UPI0001792BCB PREDICTED: similar to rothmund-thomson syndrome DNA helicase recq4 n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792BCB Length = 1219 Score = 66.6 bits (161), Expect = 1e-09 Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 4/107 (3%) Frame = +2 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P++ V LDEAHC+S+WSHNFRP+YL + L G + F L LTATA++ Sbjct: 652 PIAFVCLDEAHCLSQWSHNFRPSYLMICQVLREKFGVKTF-----------LGLTATATI 700 Query: 386 ATAAAITSALRTP----TVVASDVARTNLQLSIVRAPTVDAKLPLLL 514 +T ++I S L +++ NL LS+ R D L LL Sbjct: 701 STVSSIASELMLDDDPNSIIKDTPLPDNLMLSVSRDKDRDKALINLL 747 [113][TOP] >UniRef100_UPI0000E21CFA PREDICTED: RecQ protein-like 4 n=1 Tax=Pan troglodytes RepID=UPI0000E21CFA Length = 1208 Score = 66.6 bits (161), Expect = 1e-09 Identities = 45/121 (37%), Positives = 57/121 (47%), Gaps = 3/121 (2%) Frame = +2 Query: 164 GAGGDGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSP 343 GAGG P + P PV+ +DEAHC+S+WSHNFRP YL + L G F Sbjct: 586 GAGGLPPATQLP--PVAFACIDEAHCLSQWSHNFRPCYLRVCKVLRERMGVHCF------ 637 Query: 344 HAPAVLALTATASVATAAAITSAL---RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLL 514 L LTATA+ TA+ + L P + TNL LS+ D L LL Sbjct: 638 -----LGLTATATRRTASDVAQHLAVAEEPDLHGPAPVPTNLHLSVSMDRDTDQALLTLL 692 Query: 515 R 517 + Sbjct: 693 Q 693 [114][TOP] >UniRef100_UPI00017B0A06 UPI00017B0A06 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A06 Length = 1453 Score = 66.6 bits (161), Expect = 1e-09 Identities = 55/172 (31%), Positives = 70/172 (40%), Gaps = 4/172 (2%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 ++ G V VL +SPE L+ GGGG G G + Sbjct: 770 KVKSGQVCVLLLSPEALV---------------GGGGSGSGCLPSAQ------------- 801 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 PV+ +DEAHC+SEWSHNFRP YL L L G +L LTA Sbjct: 802 -ELPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRDRLG-----------VQCLLGLTA 849 Query: 374 TASVATAAAITSAL----RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 TA+++TA I L + V S NL LS+ D L LL+ Sbjct: 850 TATLSTALDIARHLDINDQDGIAVRSAAVPPNLHLSVSTDREKDQALVSLLK 901 [115][TOP] >UniRef100_UPI00017B0A05 UPI00017B0A05 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A05 Length = 1465 Score = 66.6 bits (161), Expect = 1e-09 Identities = 55/172 (31%), Positives = 70/172 (40%), Gaps = 4/172 (2%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 ++ G V VL +SPE L+ GGGG G G + Sbjct: 782 KVKSGQVCVLLLSPEALV---------------GGGGSGSGCLPSAQ------------- 813 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 PV+ +DEAHC+SEWSHNFRP YL L L G +L LTA Sbjct: 814 -ELPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRDRLG-----------VQCLLGLTA 861 Query: 374 TASVATAAAITSAL----RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 TA+++TA I L + V S NL LS+ D L LL+ Sbjct: 862 TATLSTALDIARHLDINDQDGIAVRSAAVPPNLHLSVSTDREKDQALVSLLK 913 [116][TOP] >UniRef100_Q4RLC3 Chromosome 21 SCAF15022, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4RLC3_TETNG Length = 910 Score = 66.6 bits (161), Expect = 1e-09 Identities = 55/172 (31%), Positives = 70/172 (40%), Gaps = 4/172 (2%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 ++ G V VL +SPE L+ GGGG G G + Sbjct: 278 KVKSGQVCVLLLSPEALV---------------GGGGSGSGCLPSAQ------------- 309 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 PV+ +DEAHC+SEWSHNFRP YL L L G +L LTA Sbjct: 310 -ELPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRDRLG-----------VQCLLGLTA 357 Query: 374 TASVATAAAITSAL----RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 TA+++TA I L + V S NL LS+ D L LL+ Sbjct: 358 TATLSTALDIARHLDINDQDGIAVRSAAVPPNLHLSVSTDREKDQALVSLLK 409 [117][TOP] >UniRef100_Q3A2W5 ATP-dependent DNA helicase RecQ n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2W5_PELCD Length = 637 Score = 66.6 bits (161), Expect = 1e-09 Identities = 52/170 (30%), Positives = 73/170 (42%), Gaps = 2/170 (1%) Frame = +2 Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196 L +G++ +L+++PERL +ERF H + G Sbjct: 104 LADGSLKILYIAPERLSNERFL-----HRLQGR--------------------------- 131 Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376 P++L+ +DEAHCISEW HNFRP YL +A R VLALTAT Sbjct: 132 ---PIALLAVDEAHCISEWGHNFRPEYLKIARMAEELKVGR------------VLALTAT 176 Query: 377 ASVATAAAITSA--LRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A+ A I A + + + R NL L++ P + LL RL Sbjct: 177 ATPDVADDIRRAFHIADNDQIQTSFHRPNLHLTVSPCPAPQRRQQLLQRL 226 [118][TOP] >UniRef100_B5ZD27 ATP-dependent DNA helicase RecQ n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZD27_GLUDA Length = 620 Score = 66.6 bits (161), Expect = 1e-09 Identities = 53/159 (33%), Positives = 68/159 (42%), Gaps = 2/159 (1%) Frame = +2 Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181 RI L+ G +D+L+VSPERLLS G Sbjct: 112 RIRADLVAGRLDILYVSPERLLSP-----------------------------------G 136 Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361 R R+ +S++ +DEAHCIS W H FRP Y LA PG PR + Sbjct: 137 MLDRLSRLTLSVIAIDEAHCISAWGHEFRPEYRALARLPEHFPG----VPR--------I 184 Query: 362 ALTATASVATAAAITSALRTP--TVVASDVARTNLQLSI 472 ALTATA T A I AL P V+ + R NL +++ Sbjct: 185 ALTATADPRTQADILDALAMPDARVLRASFHRPNLDIAV 223 [119][TOP] >UniRef100_A9B0G6 ATP-dependent DNA helicase, RecQ family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B0G6_HERA2 Length = 864 Score = 66.6 bits (161), Expect = 1e-09 Identities = 41/107 (38%), Positives = 55/107 (51%) Frame = +2 Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379 +V +SL V+DEAHC+S W +FRP YL + +AL P VL LTATA Sbjct: 152 QVGISLFVVDEAHCVSLWGFSFRPDYLFIREALRELGN------------PLVLGLTATA 199 Query: 380 SVATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 S AT AI L V ++V R NL +++A + K +L L Sbjct: 200 SPATEKAICEQLGDLETVRTNVFRPNLHFELIKASNKEKKQAAILSL 246 [120][TOP] >UniRef100_A4SN75 ATP-dependent DNA helicase RecQ n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SN75_AERS4 Length = 641 Score = 66.6 bits (161), Expect = 1e-09 Identities = 49/163 (30%), Positives = 73/163 (44%), Gaps = 2/163 (1%) Frame = +2 Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181 R+ + +G + +L +S ERL +ERF F++ Sbjct: 95 RVMQQASDGQLKILMISVERLKNERFRRFIQ----------------------------- 125 Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361 +VP+S++V+DEAHCISEW HNFRP YL +L R P VL Sbjct: 126 ------QVPLSMLVVDEAHCISEWGHNFRPDYL------------KLPAYRRELKIPQVL 167 Query: 362 ALTATASVATAAAITSA--LRTPTVVASDVARTNLQLSIVRAP 484 LTATA+ A A + + + ++ + R NL L++V P Sbjct: 168 LLTATATPAVMADMQAKFDIEDEGLIVTGFYRANLDLAVVPQP 210 [121][TOP] >UniRef100_A4SG55 ATP-dependent DNA helicase RecQ n=1 Tax=Chlorobium phaeovibrioides DSM 265 RepID=A4SG55_PROVI Length = 622 Score = 66.6 bits (161), Expect = 1e-09 Identities = 53/172 (30%), Positives = 74/172 (43%) Frame = +2 Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181 ++ L G++D+L+V+PER + F + Sbjct: 110 KVLDELESGSLDLLYVAPERFALDSFRKLIG----------------------------- 140 Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361 +VPVS+ V+DEAHCISEW H+FRP YL L+ + +F R P A Sbjct: 141 ------KVPVSMAVIDEAHCISEWGHDFRPDYLQLSSLV------TMF--RDVP--VAGF 184 Query: 362 ALTATASVATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 TAT V ALR P V + R NL S++ VDA++ LLR Sbjct: 185 TATATQRVQLDTLRRLALREPFTVRASFDRPNLTYSVLFKDGVDAQIVSLLR 236 [122][TOP] >UniRef100_Q2C8E2 Putative putative ATP-dependent DNA helicase RecQ n=1 Tax=Photobacterium sp. SKA34 RepID=Q2C8E2_9GAMM Length = 638 Score = 66.6 bits (161), Expect = 1e-09 Identities = 55/169 (32%), Positives = 74/169 (43%), Gaps = 2/169 (1%) Frame = +2 Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202 +G + VL +S ERL +ERF F+ + Sbjct: 102 QGEIKVLMISVERLKNERFRHFIS-----------------------------------Q 126 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 VP+SL+V+DEAHCISEW HNFRP YL L + S + P VL LTATA+ Sbjct: 127 VPISLLVVDEAHCISEWGHNFRPDYLKLPYY------------QQSLNIPQVLLLTATAT 174 Query: 383 VATAAAITSA--LRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 + + +V + R NL LSI+ A D KL +L + L Sbjct: 175 PTVINDMQDKFNIAKDDIVVTGFYRKNLDLSILAAQD-DEKLDVLQQQL 222 [123][TOP] >UniRef100_C6MFV5 ATP-dependent DNA helicase RecQ n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MFV5_9PROT Length = 635 Score = 66.6 bits (161), Expect = 1e-09 Identities = 50/160 (31%), Positives = 71/160 (44%), Gaps = 2/160 (1%) Frame = +2 Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181 R+E +LL D+L+V+PERLL+ RF + M Sbjct: 132 RVEQKLLADEYDLLYVAPERLLTARFLNLMT----------------------------- 162 Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361 R+P++L +DEAHC+S+W H+FRP Y+ L+ LH FP A + Sbjct: 163 ------RIPIALFAIDEAHCVSQWGHDFRPEYIQLS-ILH-----ERFP------AIPRI 204 Query: 362 ALTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIV 475 ALTATA + T I L V S R N++ I+ Sbjct: 205 ALTATADMDTRKEIIERLGLDLAKVFVSSFDRPNIRYQII 244 [124][TOP] >UniRef100_B1S4T9 Putative uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S4T9_9BIFI Length = 653 Score = 66.6 bits (161), Expect = 1e-09 Identities = 46/156 (29%), Positives = 66/156 (42%), Gaps = 2/156 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L+V+PERL +ERF +F A R Sbjct: 110 GFIKLLYVAPERLETERFRNF-----------------------------------ASRT 134 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+SLV +DEAHC+S+W +FR +YL + + + P P V A TATA+ Sbjct: 135 PISLVAVDEAHCVSQWGQDFRSSYLGIGEFIANLPA-----------RPTVAAFTATATE 183 Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPT 487 I S LR P V + R NL +++ T Sbjct: 184 RVRHDIVSMLGLRDPDVTVTGFDRPNLYFDVIKLET 219 [125][TOP] >UniRef100_A7SUT5 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SUT5_NEMVE Length = 714 Score = 66.6 bits (161), Expect = 1e-09 Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 4/123 (3%) Frame = +2 Query: 161 GGAGGDGPGGRAPRVP-VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRG 337 GG GG G + ++P ++ +DEAHC+SEWSHNFRP+YL + L G + F Sbjct: 98 GGMGGSGCLPSSTKMPPIAFACIDEAHCLSEWSHNFRPSYLRVCKILRDRYGVQCF---- 153 Query: 338 SPHAPAVLALTATASVATAAAITSAL---RTPTVVASDVARTNLQLSIVRAPTVDAKLPL 508 L LTATA+ +TA ++ L V+ NL+LS+ R D L Sbjct: 154 -------LGLTATATQSTADSVAQHLGIADAGAVIRGAAVPPNLRLSVSRDRDKDKALIE 206 Query: 509 LLR 517 LL+ Sbjct: 207 LLQ 209 [126][TOP] >UniRef100_Q8G567 ATP-dependent DNA helicase RecQ n=1 Tax=Bifidobacterium longum RepID=Q8G567_BIFLO Length = 651 Score = 66.2 bits (160), Expect = 1e-09 Identities = 46/156 (29%), Positives = 64/156 (41%), Gaps = 2/156 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L+V+PERL + RF F A R Sbjct: 108 GQIKLLYVAPERLETGRFRDF-----------------------------------AART 132 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+SL+ +DEAHC+S+W +FR +YL + D + G P P V A TATA+ Sbjct: 133 PISLIAVDEAHCVSQWGQDFRSSYLGIGDFI-----------AGLPQRPPVGAFTATATE 181 Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPT 487 I LR P V + R NL +V+ T Sbjct: 182 RVRRDIVGLLGLRNPAVTVTGFDRPNLYFDVVKLET 217 [127][TOP] >UniRef100_Q3ICY6 Putative helicase (RecQ-like) n=1 Tax=Pseudoalteromonas haloplanktis TAC125 RepID=Q3ICY6_PSEHT Length = 648 Score = 66.2 bits (160), Expect = 1e-09 Identities = 53/163 (32%), Positives = 67/163 (41%), Gaps = 2/163 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G V VL VS ER +ERF F+ ++ Sbjct: 106 GKVKVLMVSVERFKNERFREFIN-----------------------------------QI 130 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS- 382 VS++V+DEAHCISEW HNFRP YL L R + P VL LTATA+ Sbjct: 131 AVSMLVVDEAHCISEWGHNFRPDYLKLPRY------------REELNIPLVLLLTATATK 178 Query: 383 -VATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPL 508 V A A+ +V + R NL LS++ T D L Sbjct: 179 KVKRDMAERFAIAPECIVQTGFYRANLDLSVLSVKTADKNTEL 221 [128][TOP] >UniRef100_B3DT88 Superfamily II DNA helicase n=1 Tax=Bifidobacterium longum DJO10A RepID=B3DT88_BIFLD Length = 621 Score = 66.2 bits (160), Expect = 1e-09 Identities = 46/156 (29%), Positives = 64/156 (41%), Gaps = 2/156 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L+V+PERL + RF F A R Sbjct: 78 GQIKLLYVAPERLETGRFRDF-----------------------------------AART 102 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+SL+ +DEAHC+S+W +FR +YL + D + G P P V A TATA+ Sbjct: 103 PISLIAVDEAHCVSQWGQDFRSSYLGIGDFI-----------AGLPQRPPVGAFTATATE 151 Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPT 487 I LR P V + R NL +V+ T Sbjct: 152 RVRRDIVGLLGLRNPAVTVTGFDRPNLYFDVVKLET 187 [129][TOP] >UniRef100_C5E8I0 ATP-dependent DNA helicase RecQ n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E8I0_BIFLO Length = 651 Score = 66.2 bits (160), Expect = 1e-09 Identities = 46/156 (29%), Positives = 64/156 (41%), Gaps = 2/156 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L+V+PERL + RF F A R Sbjct: 108 GQIKLLYVAPERLETGRFRDF-----------------------------------AART 132 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+SL+ +DEAHC+S+W +FR +YL + D + G P P V A TATA+ Sbjct: 133 PISLIAVDEAHCVSQWGQDFRSSYLGIGDFI-----------AGLPQRPPVGAFTATATE 181 Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPT 487 I LR P V + R NL +V+ T Sbjct: 182 RVRRDIVGLLGLRNPAVTVTGFDRPNLYFDVVKLET 217 [130][TOP] >UniRef100_C2GUQ6 ATP-dependent DNA helicase RecQ n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 55813 RepID=C2GUQ6_BIFLO Length = 651 Score = 66.2 bits (160), Expect = 1e-09 Identities = 46/156 (29%), Positives = 64/156 (41%), Gaps = 2/156 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L+V+PERL + RF F A R Sbjct: 108 GQIKLLYVAPERLETGRFRDF-----------------------------------AART 132 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+SL+ +DEAHC+S+W +FR +YL + D + G P P V A TATA+ Sbjct: 133 PISLIAVDEAHCVSQWGQDFRSSYLGIGDFI-----------AGLPQRPPVGAFTATATE 181 Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPT 487 I LR P V + R NL +V+ T Sbjct: 182 RVRRDIVGLLGLRNPAVTVTGFDRPNLYFDVVKLET 217 [131][TOP] >UniRef100_B0MTL7 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MTL7_9BACT Length = 641 Score = 66.2 bits (160), Expect = 1e-09 Identities = 54/168 (32%), Positives = 74/168 (44%), Gaps = 2/168 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G V L+V+PERL SE F R R+ Sbjct: 113 GDVKFLYVAPERLASEAFRL-----------------------------------RVQRM 137 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 VSL+ +DEAHCIS+W ++FRP+YL +A+ PG VLALTA+A+ Sbjct: 138 NVSLLAVDEAHCISQWGYDFRPSYLRIAELRERIPG------------VPVLALTASATP 185 Query: 386 ATAAAITSALR--TPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 A I LR P ++ SD +R NL ++ D K LLR++ Sbjct: 186 RVADDIMEKLRFAEPHLLRSDFSRPNLSYAVRH---TDDKNEQLLRII 230 [132][TOP] >UniRef100_A4E9T7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T7_9ACTN Length = 659 Score = 66.2 bits (160), Expect = 1e-09 Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 2/151 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 R EG +++V+PERLL RF +F + A + G G Sbjct: 106 RAREGRYQLMYVAPERLLEPRFLAFAQEAAGSAGIG------------------------ 141 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 V LV +DEAHC+S+W +FRPAYL + + + P P V A TA Sbjct: 142 -----VPLVAIDEAHCVSQWGQDFRPAYLQIREFID-----------SLPQRPIVAAFTA 185 Query: 374 TASVATAAAITS--ALRTPTVVASDVARTNL 460 TA+ A I L+ P V + R NL Sbjct: 186 TATERVRADIQQMLGLQNPATVVTGFDRKNL 216 [133][TOP] >UniRef100_C7GA56 ATP-dependent DNA helicase RecQ n=2 Tax=Roseburia intestinalis L1-82 RepID=C7GA56_9FIRM Length = 639 Score = 65.9 bits (159), Expect = 2e-09 Identities = 48/154 (31%), Positives = 68/154 (44%), Gaps = 2/154 (1%) Frame = +2 Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202 +G +++V+PERL + RF F A R Sbjct: 80 QGQYKIIYVAPERLNTMRFLDF-----------------------------------ACR 104 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 +S+V +DEAHCIS+W +FRP+YL +AD L +RL P P V A TATA+ Sbjct: 105 ADISMVTVDEAHCISQWGQDFRPSYLEIADFL-----ARL------PRRPVVSAFTATAT 153 Query: 383 VATAAAITSA--LRTPTVVASDVARTNLQLSIVR 478 IT + L+ P V + R NL +V+ Sbjct: 154 ERVKQDITGSLHLQNPVTVVTGFDRPNLFFRVVK 187 [134][TOP] >UniRef100_UPI0000F2C84B PREDICTED: similar to DNA helicase n=1 Tax=Monodelphis domestica RepID=UPI0000F2C84B Length = 1465 Score = 65.9 bits (159), Expect = 2e-09 Identities = 49/125 (39%), Positives = 60/125 (48%), Gaps = 7/125 (5%) Frame = +2 Query: 164 GAGGDG---PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPR 334 GAGG P R P PV+ +DEAHC+S+WSHNFRP YL L L G R F Sbjct: 837 GAGGFSCLPPAARLP--PVAFACIDEAHCLSQWSHNFRPCYLRLCKVLRERLGVRCF--- 891 Query: 335 GSPHAPAVLALTATASVATAAAITSALRTP--TVVASDVAR--TNLQLSIVRAPTVDAKL 502 L LTATA+ ATA + L P + + +A NL LS+ D L Sbjct: 892 --------LGLTATATCATARDVGEHLGIPEEAIFGTHLAAIPPNLHLSVSLDRDKDQAL 943 Query: 503 PLLLR 517 LL+ Sbjct: 944 VSLLQ 948 [135][TOP] >UniRef100_Q47WD5 RecQ domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47WD5_COLP3 Length = 690 Score = 65.9 bits (159), Expect = 2e-09 Identities = 48/151 (31%), Positives = 64/151 (42%) Frame = +2 Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202 +G + VL VS ER +ERF F+ + Sbjct: 113 DGDIKVLMVSVERFKNERFRQFIES----------------------------------- 137 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 VPVS++V+DEAHCISEW HNFRP YL L S + +L TAT Sbjct: 138 VPVSMLVVDEAHCISEWGHNFRPDYLKLPSYCQALNISLVL----------LLTATATRK 187 Query: 383 VATAAAITSALRTPTVVASDVARTNLQLSIV 475 V A A+R +V + R+NL LS++ Sbjct: 188 VKQDMAAKFAIRDEHIVQTGFYRSNLDLSVL 218 [136][TOP] >UniRef100_Q15Y92 ATP-dependent DNA helicase, RecQ family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15Y92_PSEA6 Length = 681 Score = 65.9 bits (159), Expect = 2e-09 Identities = 52/159 (32%), Positives = 66/159 (41%), Gaps = 2/159 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 R+ G + +L VS ER +ERF F+ + Sbjct: 112 RVRSGEIKILMVSVERFKNERFRQFIDS-------------------------------- 139 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 V VS++V+DEAHCISEW HNFRP YL L D R + P VL LTA Sbjct: 140 ---VAVSMLVVDEAHCISEWGHNFRPDYLKLPDY------------RAQLNIPLVLLLTA 184 Query: 374 TAS--VATAAAITSALRTPTVVASDVARTNLQLSIVRAP 484 TA+ V A A+ VV + R NL L + P Sbjct: 185 TATKKVKLDMAKRFAIEPQHVVQTGFYRKNLDLHVSATP 223 [137][TOP] >UniRef100_A4VGA1 ATP-dependent DNA helicase domain protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VGA1_PSEU5 Length = 641 Score = 65.9 bits (159), Expect = 2e-09 Identities = 51/155 (32%), Positives = 68/155 (43%), Gaps = 2/155 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 R G + +L +S ERL +ERF F+ Sbjct: 99 RAKSGELKILMISVERLKNERFRHFIS--------------------------------- 125 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 +VP+SL+V+DEAHCISEW HNFRP YL L D R F + P VL LTA Sbjct: 126 --QVPISLLVVDEAHCISEWGHNFRPDYLKLPDY------QRQF------NIPQVLLLTA 171 Query: 374 TASVATAAAITS--ALRTPTVVASDVARTNLQLSI 472 TA+ A + + ++ VV + R NL L + Sbjct: 172 TATPPVIADMQAKFSIAADDVVTTGFYRPNLNLLV 206 [138][TOP] >UniRef100_A3D4D4 ATP-dependent DNA helicase, RecQ family n=1 Tax=Shewanella baltica OS155 RepID=A3D4D4_SHEB5 Length = 662 Score = 65.9 bits (159), Expect = 2e-09 Identities = 50/156 (32%), Positives = 67/156 (42%), Gaps = 2/156 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L VS ER +ERF F+++ V Sbjct: 112 GKLKILMVSVERFKNERFRQFIQS-----------------------------------V 136 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS- 382 P+S++V+DEAHCISEW HNFRP YL L D RG P VL LTATA+ Sbjct: 137 PLSMLVVDEAHCISEWGHNFRPDYLKLPDY------------RGELEIPLVLLLTATATR 184 Query: 383 -VATAAAITSALRTPTVVASDVARTNLQLSIVRAPT 487 V A + +V + R NL L+++ T Sbjct: 185 KVKLDMAKRFDIAPEHIVQTGFYRPNLDLTVLPVST 220 [139][TOP] >UniRef100_A0AM90 RecQ protein n=1 Tax=Listeria welshimeri serovar 6b str. SLCC5334 RepID=A0AM90_LISW6 Length = 590 Score = 65.9 bits (159), Expect = 2e-09 Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 2/103 (1%) Frame = +2 Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379 +VP+SL +DEAHCIS+W H+FRP+YL L ++L P V+ALTATA Sbjct: 129 QVPISLFAIDEAHCISQWGHDFRPSYLTLCNSLD-----------KMTRRPLVIALTATA 177 Query: 380 SVATAAAITSALRTP--TVVASDVARTNLQLSIVRAPTVDAKL 502 + A + I L+ +VV + +R NL +V+ D L Sbjct: 178 TQAVSDDICRLLKIKPNSVVKTGFSRDNLAFQVVKGQDKDKYL 220 [140][TOP] >UniRef100_C9BJH6 ATP-dependent DNA helicase RecQ n=7 Tax=Enterococcus faecium RepID=C9BJH6_ENTFC Length = 590 Score = 65.9 bits (159), Expect = 2e-09 Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 2/92 (2%) Frame = +2 Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388 V ++ +DEAHCIS+W H+FRP+YL +A+ L P+ P ++ALTATA+V Sbjct: 128 VRMIAIDEAHCISQWGHDFRPSYLQMANQLD-----------QLPNRPVIVALTATATVQ 176 Query: 389 TAAAITSALRTP--TVVASDVARTNLQLSIVR 478 AA I L+ P + + R NL+ +++ Sbjct: 177 VAADIKRLLKIPENNHIQTGFERENLRFQVIK 208 [141][TOP] >UniRef100_C9BC97 ATP-dependent DNA helicase RecQ n=1 Tax=Enterococcus faecium 1,141,733 RepID=C9BC97_ENTFC Length = 599 Score = 65.9 bits (159), Expect = 2e-09 Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 2/92 (2%) Frame = +2 Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388 V ++ +DEAHCIS+W H+FRP+YL +A L+ P+ P ++ALTATA++ Sbjct: 128 VCMIAIDEAHCISQWGHDFRPSYLQMAKQLN-----------QLPNRPVIVALTATATIQ 176 Query: 389 TAAAITSALRTP--TVVASDVARTNLQLSIVR 478 AA I L+ P + + R NL+ +V+ Sbjct: 177 VAADIKRLLKIPDGNHIQTGFERENLRFQVVK 208 [142][TOP] >UniRef100_C9B624 ATP-dependent DNA helicase RecQ n=1 Tax=Enterococcus faecium 1,231,501 RepID=C9B624_ENTFC Length = 590 Score = 65.9 bits (159), Expect = 2e-09 Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 2/92 (2%) Frame = +2 Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388 V ++ +DEAHCIS+W H+FRP+YL +A+ L P+ P ++ALTATA+V Sbjct: 128 VRMIAIDEAHCISQWGHDFRPSYLQMANQLD-----------QLPNRPVIVALTATATVQ 176 Query: 389 TAAAITSALRTP--TVVASDVARTNLQLSIVR 478 AA I L+ P + + R NL+ +++ Sbjct: 177 VAADIKRLLKIPENNHIQTGFERENLRFQVIK 208 [143][TOP] >UniRef100_C9AF45 ATP-dependent DNA helicase RecQ n=2 Tax=Enterococcus faecium RepID=C9AF45_ENTFC Length = 655 Score = 65.9 bits (159), Expect = 2e-09 Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 2/92 (2%) Frame = +2 Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388 V ++ +DEAHCIS+W H+FRP+YL +A L+ P+ P ++ALTATA++ Sbjct: 184 VCMIAIDEAHCISQWGHDFRPSYLQMAKQLN-----------QLPNRPVIVALTATATIQ 232 Query: 389 TAAAITSALRTP--TVVASDVARTNLQLSIVR 478 AA I L+ P + + R NL+ +V+ Sbjct: 233 VAADIKRLLKIPDGNHIQTGFERENLRFQVVK 264 [144][TOP] >UniRef100_C8WPE9 ATP-dependent DNA helicase RecQ n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WPE9_9ACTN Length = 681 Score = 65.9 bits (159), Expect = 2e-09 Identities = 47/157 (29%), Positives = 63/157 (40%), Gaps = 2/157 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 R L+GA +++V+PERL RF F Sbjct: 104 RALDGAYQIMYVAPERLADPRFLEF----------------------------------- 128 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 A R + LV +DEAHC+S+W +FRP+YL + D + P P V A TA Sbjct: 129 AQRAAIPLVAVDEAHCVSQWGQDFRPSYLTIGDFI-----------AQLPSRPVVAAFTA 177 Query: 374 TASVATAAAITSA--LRTPTVVASDVARTNLQLSIVR 478 TA+ A I LR P V + R NL + R Sbjct: 178 TATARVRADIVRLLDLRDPYEVVTGFDRPNLYFGVER 214 [145][TOP] >UniRef100_C2ADA1 ATP-dependent DNA helicase RecQ n=1 Tax=Thermomonospora curvata DSM 43183 RepID=C2ADA1_THECU Length = 706 Score = 65.9 bits (159), Expect = 2e-09 Identities = 57/176 (32%), Positives = 73/176 (41%), Gaps = 10/176 (5%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G VDVL VSPERL + F + G G Sbjct: 118 GVVDVLLVSPERLNNPAFRDAVLPKLAAGAG----------------------------- 148 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS- 382 +VV+DEAHCIS+W H+FRP Y L L P G P VLA TATA+ Sbjct: 149 ---MVVVDEAHCISDWGHDFRPDYRRLRTLLADL-------PEGVP----VLATTATANA 194 Query: 383 ---------VATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 +A+ AA A P V+ + R +L L++VR PT + +L L L Sbjct: 195 RVVQDVREQLASGAAAGPAGEVP-VLRGSLERASLHLAVVRLPTAEHRLAWLAERL 249 [146][TOP] >UniRef100_C1UU04 ATP-dependent DNA helicase, RecQ family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=C1UU04_9DELT Length = 646 Score = 65.9 bits (159), Expect = 2e-09 Identities = 55/173 (31%), Positives = 75/173 (43%), Gaps = 3/173 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 RL EG + +V+PERL RF +R GGR Sbjct: 121 RLSEGRPCIAYVTPERLGEPRFRKRLR------------------------------GGR 150 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 V L V+DEAHCIS+W H+FRPAYL L +A+ + P VLALTA Sbjct: 151 -----VGLFVVDEAHCISQWGHDFRPAYLGLGEAVK------------ALGRPPVLALTA 193 Query: 374 TASVATAAAITSAL---RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 TA + I + L +++ + R NL + +A + K LLRL+ Sbjct: 194 TAPPRVKSDILAQLGMDEDASIIDVGLQRPNLNYHVFKAHSEHKKRQHLLRLI 246 [147][TOP] >UniRef100_C0U7B1 ATP-dependent DNA helicase RecQ n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=C0U7B1_9ACTO Length = 741 Score = 65.9 bits (159), Expect = 2e-09 Identities = 53/164 (32%), Positives = 70/164 (42%), Gaps = 4/164 (2%) Frame = +2 Query: 32 VDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRVPV 211 VDVL VSPERL + RF + G Sbjct: 123 VDVLLVSPERLTNPRFREEQLPDLVARCG------------------------------- 151 Query: 212 SLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVAT 391 L+V+DEAHC+S+W H+FRP Y + D L P G+P VLA TATA+ Sbjct: 152 -LLVVDEAHCVSDWGHDFRPDYRRIRDLLGTLPA-------GTP----VLATTATANERV 199 Query: 392 AAAITSALRT----PTVVASDVARTNLQLSIVRAPTVDAKLPLL 511 A + L T V +AR +L+L ++R PT A+L L Sbjct: 200 VADVAEQLGAGGVGVTTVRGPLARDSLRLGVLRLPTDRARLAWL 243 [148][TOP] >UniRef100_Q9C6N0 ATP-dependent DNA helicase RecQ, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C6N0_ARATH Length = 941 Score = 65.9 bits (159), Expect = 2e-09 Identities = 56/174 (32%), Positives = 74/174 (42%), Gaps = 21/174 (12%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 +L EG + VLFVSPERLL+ F S R Sbjct: 353 KLKEGIIKVLFVSPERLLNVEFLSMFRMS------------------------------- 381 Query: 194 APRVPVSLVVLDEAHCISE-----------W--------SHNFRPAYLHLADALHGSPGS 316 + VSLVV+DEAHC+SE W SHNFRP+Y+ L S Sbjct: 382 ---LSVSLVVVDEAHCVSECIYCLSLFCLSWLLRAILNRSHNFRPSYMRL-------KAS 431 Query: 317 RLFPPRGSPHAPAVLALTATASVATAAAITSALRTPT--VVASDVARTNLQLSI 472 LF A +LA+TATA+ T A+ S+L P+ ++ R N +LS+ Sbjct: 432 MLF---SELKAECILAMTATATTMTLQAVMSSLEIPSTNLIQKSQLRDNFELSV 482 [149][TOP] >UniRef100_C8NND3 ATP-dependent DNA helicase n=2 Tax=Corynebacterium efficiens RepID=C8NND3_COREF Length = 683 Score = 65.5 bits (158), Expect = 2e-09 Identities = 55/169 (32%), Positives = 75/169 (44%), Gaps = 3/169 (1%) Frame = +2 Query: 2 RIEGRLLEGAVDVLFVSPERLLSERF--ASFMRAHAMTGGGGGRGDGTAATDDGDGGAGG 175 +I+ + GAVDVL +SPERL + F A R A TG Sbjct: 106 QIQAEVTAGAVDVLLISPERLNNPDFRDAVLPRLAAETG--------------------- 144 Query: 176 DGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPA 355 LVV+DEAHCIS+W H+FRP Y + D L G +P AP Sbjct: 145 -------------LVVVDEAHCISDWGHDFRPDYRRIRDLLAGL----------APGAP- 180 Query: 356 VLALTATASVATAAAITSALRTPT-VVASDVARTNLQLSIVRAPTVDAK 499 VLA TATA+ + + L T ++ + R +L L++V P A+ Sbjct: 181 VLATTATANDRVVEDVRAQLGEDTGLLRGGLDRESLHLAVVNIPDSTAR 229 [150][TOP] >UniRef100_Q03A98 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus casei ATCC 334 RepID=Q03A98_LACC3 Length = 592 Score = 65.5 bits (158), Expect = 2e-09 Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 2/106 (1%) Frame = +2 Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388 +SL +DEAHCIS+W H+FRP+YL+LA+ ++L P P V+ALTATA+ Sbjct: 133 ISLFAIDEAHCISQWGHDFRPSYLNLANV-----AAQL------PSQPPVIALTATATPR 181 Query: 389 TAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I L P ++ + R+NL +VR D L L+L Sbjct: 182 VAQDICQRLAIPADGMINTGFERSNLSFKVVRDQDEDRYLLDYLKL 227 [151][TOP] >UniRef100_B3WD78 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus casei BL23 RepID=B3WD78_LACCB Length = 592 Score = 65.5 bits (158), Expect = 2e-09 Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 2/106 (1%) Frame = +2 Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388 +SL +DEAHCIS+W H+FRP+YL+LA+ ++L P P V+ALTATA+ Sbjct: 133 ISLFAIDEAHCISQWGHDFRPSYLNLANV-----AAQL------PSQPPVIALTATATPR 181 Query: 389 TAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I L P ++ + R+NL +VR D L L+L Sbjct: 182 VAQDICQRLAIPADGMINTGFERSNLSFKVVRDQDEDRYLLDYLKL 227 [152][TOP] >UniRef100_A7HXG7 ATP-dependent DNA helicase RecQ n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HXG7_PARL1 Length = 633 Score = 65.5 bits (158), Expect = 2e-09 Identities = 51/168 (30%), Positives = 72/168 (42%), Gaps = 2/168 (1%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 I L G +D+L+V+PERL S+ F SF+ Sbjct: 132 IREALTAGELDLLYVTPERLASDGFISFLA------------------------------ 161 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 RVP++L +DEAHCIS+W H+FRP YL L P PR LA Sbjct: 162 -----RVPLALFAIDEAHCISQWGHDFRPEYLQLGRLKERFPD----VPR--------LA 204 Query: 365 LTATASVATAAAITSALR--TPTVVASDVARTNLQLSIVRAPTVDAKL 502 LTATA T + L+ + ++ R N++ +IVR ++L Sbjct: 205 LTATADPQTRDDLVHRLQLDDARIFSASFDRPNIRYTIVRKDNAKSQL 252 [153][TOP] >UniRef100_Q1N3I0 RecQ domain protein n=1 Tax=Bermanella marisrubri RepID=Q1N3I0_9GAMM Length = 658 Score = 65.5 bits (158), Expect = 2e-09 Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 2/165 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G++ +L +S ER +ERF F++ V Sbjct: 117 GSIKILMISVERFKNERFRQFIQT-----------------------------------V 141 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+S++V+DEAHCISEW HNFRP YL L R + P L LTATA+ Sbjct: 142 PISMLVVDEAHCISEWGHNFRPDYLKLPSY------------RKDLNIPLTLLLTATATK 189 Query: 386 ATAAAITSA--LRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLL 514 A + ++ +V + R NL LS++ + KLP L+ Sbjct: 190 AVKRDMAEKFDIQPEHIVQTGFYRPNLDLSVLPVKQAE-KLPTLV 233 [154][TOP] >UniRef100_C8UT24 DNA helicase RecQ n=1 Tax=Lactobacillus rhamnosus GG RepID=C8UT24_LACRG Length = 593 Score = 65.5 bits (158), Expect = 2e-09 Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 2/106 (1%) Frame = +2 Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388 +SL +DEAHCIS+W H+FRP+YL+LA+ ++L P P V+ALTATA+ Sbjct: 133 ISLFAIDEAHCISQWGHDFRPSYLNLANV-----AAQL------PSQPPVIALTATATPR 181 Query: 389 TAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I L P V+ + R NL +VR D L L+L Sbjct: 182 VAQDICQRLMIPDDGVINTGFERDNLSFKVVRDQDEDRYLLDYLKL 227 [155][TOP] >UniRef100_C7TIC6 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus rhamnosus Lc 705 RepID=C7TIC6_LACRL Length = 591 Score = 65.5 bits (158), Expect = 2e-09 Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 2/106 (1%) Frame = +2 Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388 +SL +DEAHCIS+W H+FRP+YL+LA+ ++L P P V+ALTATA+ Sbjct: 131 ISLFAIDEAHCISQWGHDFRPSYLNLANV-----AAQL------PSQPPVIALTATATPR 179 Query: 389 TAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I L P V+ + R NL +VR D L L+L Sbjct: 180 VAQDICQRLMIPDDGVINTGFERDNLSFKVVRDQDEDRYLLDYLKL 225 [156][TOP] >UniRef100_C7TBF1 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus rhamnosus GG RepID=C7TBF1_LACRG Length = 591 Score = 65.5 bits (158), Expect = 2e-09 Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 2/106 (1%) Frame = +2 Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388 +SL +DEAHCIS+W H+FRP+YL+LA+ ++L P P V+ALTATA+ Sbjct: 131 ISLFAIDEAHCISQWGHDFRPSYLNLANV-----AAQL------PSQPPVIALTATATPR 179 Query: 389 TAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I L P V+ + R NL +VR D L L+L Sbjct: 180 VAQDICQRLMIPDDGVINTGFERDNLSFKVVRDQDEDRYLLDYLKL 225 [157][TOP] >UniRef100_C5F3C1 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus paracasei subsp. paracasei 8700:2 RepID=C5F3C1_LACPA Length = 592 Score = 65.5 bits (158), Expect = 2e-09 Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 2/106 (1%) Frame = +2 Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388 +SL +DEAHCIS+W H+FRP+YL+LA+ ++L P P V+ALTATA+ Sbjct: 133 ISLFAIDEAHCISQWGHDFRPSYLNLANV-----AAQL------PSQPPVIALTATATPR 181 Query: 389 TAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I L P ++ + R+NL +VR D L L+L Sbjct: 182 VAQDICQRLAIPADGMINTGFERSNLSFKVVRDQDEDRYLLDYLKL 227 [158][TOP] >UniRef100_C2KGQ7 ATP-dependent helicase n=4 Tax=Lactobacillus crispatus RepID=C2KGQ7_9LACO Length = 589 Score = 65.5 bits (158), Expect = 2e-09 Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 2/94 (2%) Frame = +2 Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388 + LV +DEAHCIS+W H+FRPAY L D ++ S SR P +LALTATA+ A Sbjct: 130 IDLVAVDEAHCISQWGHDFRPAYRQLLDGIN-SLKSR----------PNILALTATATPA 178 Query: 389 TAAAITSALRTP--TVVASDVARTNLQLSIVRAP 484 I L P ++ + AR N+ +V +P Sbjct: 179 VQDDICEQLNIPKENMIVTSFARPNISFKVVNSP 212 [159][TOP] >UniRef100_C2JW62 ATP-dependent helicase n=1 Tax=Lactobacillus rhamnosus LMS2-1 RepID=C2JW62_LACRH Length = 593 Score = 65.5 bits (158), Expect = 2e-09 Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 2/106 (1%) Frame = +2 Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388 +SL +DEAHCIS+W H+FRP+YL+LA+ ++L P P V+ALTATA+ Sbjct: 133 ISLFAIDEAHCISQWGHDFRPSYLNLANV-----AAQL------PSQPPVIALTATATPR 181 Query: 389 TAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I L P V+ + R NL +VR D L L+L Sbjct: 182 VAQDICQRLMIPDDGVINTGFERDNLSFKVVRDQDEDRYLLDYLKL 227 [160][TOP] >UniRef100_C2FGL8 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus paracasei subsp. paracasei ATCC 25302 RepID=C2FGL8_LACPA Length = 592 Score = 65.5 bits (158), Expect = 2e-09 Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 2/106 (1%) Frame = +2 Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388 +SL +DEAHCIS+W H+FRP+YL+LA+ ++L P P V+ALTATA+ Sbjct: 133 ISLFAIDEAHCISQWGHDFRPSYLNLANV-----AAQL------PSQPPVIALTATATPR 181 Query: 389 TAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I L P ++ + R+NL +VR D L L+L Sbjct: 182 VAQDICQRLAIPADGMINTGFERSNLSFKVVRDQDEDRYLLDYLKL 227 [161][TOP] >UniRef100_B5QN93 Superfamily II DNA helicase n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QN93_LACRH Length = 593 Score = 65.5 bits (158), Expect = 2e-09 Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 2/106 (1%) Frame = +2 Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388 +SL +DEAHCIS+W H+FRP+YL+LA+ ++L P P V+ALTATA+ Sbjct: 133 ISLFAIDEAHCISQWGHDFRPSYLNLANV-----AAQL------PSQPPVIALTATATPR 181 Query: 389 TAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A I L P V+ + R NL +VR D L L+L Sbjct: 182 VAQDICQRLMIPDDGVINTGFERDNLSFKVVRDQDEDRYLLDYLKL 227 [162][TOP] >UniRef100_Q0VQD9 ATP-dependent DNA helicase RecQ n=1 Tax=Alcanivorax borkumensis SK2 RepID=Q0VQD9_ALCBS Length = 636 Score = 65.1 bits (157), Expect = 3e-09 Identities = 55/171 (32%), Positives = 75/171 (43%), Gaps = 2/171 (1%) Frame = +2 Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196 L +G++ +L+V+PERL +ERF + R Sbjct: 102 LEDGSIKLLYVAPERLANERFLA-----------------------------------RL 126 Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376 R+ +S++ +DEAHC+SEW HNFRP YL LA R VLALTAT Sbjct: 127 KRLSISMMAVDEAHCVSEWGHNFRPDYLKLAQLAKELEVGR------------VLALTAT 174 Query: 377 ASVATAAAI--TSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 A+ A I + A+ V + R NL LS VR V+ + LL L Sbjct: 175 ATPQVAQQICDSFAIAPADHVQTGFFRPNLALS-VRPYNVEERGRALLEAL 224 [163][TOP] >UniRef100_Q02X49 ATP-dependent DNA helicase RecQ n=1 Tax=Lactococcus lactis subsp. cremoris SK11 RepID=Q02X49_LACLS Length = 593 Score = 65.1 bits (157), Expect = 3e-09 Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 2/153 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +LFV+PER + F +F++ ++ Sbjct: 104 GEIKLLFVAPERFSLDYFNNFLQ-----------------------------------KL 128 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+ LV +DEAHCIS+W H+FRP+Y+ A L + P P VLALTATA+ Sbjct: 129 PIDLVAIDEAHCISQWGHDFRPSYVDFAAHL-----------KDLPTRPTVLALTATATP 177 Query: 386 ATAAAITSALR-TPT-VVASDVARTNLQLSIVR 478 A I S L +P+ + + R NL+ +V+ Sbjct: 178 KVADDIQSLLSISPSHTIKTGFLRENLRFEVVK 210 [164][TOP] >UniRef100_A7HKC6 ATP-dependent DNA helicase, RecQ family n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HKC6_FERNB Length = 448 Score = 65.1 bits (157), Expect = 3e-09 Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 9/183 (4%) Frame = +2 Query: 2 RIEGRLLEGAVD----VLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGA 169 +I ++LE AV+ +L+++PER+ +E + ++ Sbjct: 101 KINKKILEDAVNGKYKILYIAPERIDNETWKKYL-------------------------- 134 Query: 170 GGDGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHA 349 P + +S VV+DEAHCIS W H+FRP Y + + + R P + Sbjct: 135 ---------PNLKISFVVVDEAHCISVWGHDFRPDYRKIREII-----------RAVPKS 174 Query: 350 PAVLALTATASVATAAAITSALRT-----PTVVASDVARTNLQLSIVRAPTVDAKLPLLL 514 VLA+TATA A I +++ +V +D+ R NL++ ++ + KL LL Sbjct: 175 IPVLAVTATADDFIAEDIKEQMQSYIGEDIEIVRNDLFRENLRIRVIEVNGEEEKLAFLL 234 Query: 515 RLL 523 R L Sbjct: 235 RYL 237 [165][TOP] >UniRef100_A2RMM8 ATP-dependent DNA helicase RecQ n=1 Tax=Lactococcus lactis subsp. cremoris MG1363 RepID=A2RMM8_LACLM Length = 592 Score = 65.1 bits (157), Expect = 3e-09 Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 2/153 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +LFV+PER + F +F++ ++ Sbjct: 104 GEIKLLFVAPERFSLDYFNNFLQ-----------------------------------KL 128 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+ LV +DEAHCIS+W H+FRP+Y+ A L + P P VLALTATA+ Sbjct: 129 PIDLVAIDEAHCISQWGHDFRPSYVDFAAHL-----------KDLPTRPTVLALTATATP 177 Query: 386 ATAAAITSALR-TPT-VVASDVARTNLQLSIVR 478 A I S L +P+ + + R NL+ +V+ Sbjct: 178 KVADDIQSLLSISPSHTIKTGFLRENLRFEVVK 210 [166][TOP] >UniRef100_Q1ZBG4 ATP-dependent DNA helicase, RecQ family protein (Fragment) n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZBG4_9GAMM Length = 313 Score = 65.1 bits (157), Expect = 3e-09 Identities = 50/165 (30%), Positives = 69/165 (41%), Gaps = 2/165 (1%) Frame = +2 Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202 EG + +LF+S ERL SERF F++ Sbjct: 40 EGNIKILFISVERLNSERFRLFLKT----------------------------------- 64 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 + +SL+V+DEAHCISEW HNFRP YL LA R + VL LTATA+ Sbjct: 65 IRISLLVVDEAHCISEWGHNFRPDYLKLAQY------------RKEFNIAQVLLLTATAT 112 Query: 383 VATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLL 511 A + S ++ + + R+NL L + D L+ Sbjct: 113 SKVIADMASKFSISPENITQTGSYRSNLNLDVQGVSEADKLTTLI 157 [167][TOP] >UniRef100_C9ANX6 ATP-dependent DNA helicase RecQ n=1 Tax=Enterococcus faecium Com15 RepID=C9ANX6_ENTFC Length = 590 Score = 65.1 bits (157), Expect = 3e-09 Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 2/92 (2%) Frame = +2 Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388 V ++ +DEAHCIS+W H+FRP+YL +A L P+ P ++ALTATA++ Sbjct: 128 VCMIAIDEAHCISQWGHDFRPSYLQMAKQLD-----------QLPNQPVIVALTATATIQ 176 Query: 389 TAAAITSALRTP--TVVASDVARTNLQLSIVR 478 AA I L+ P + + R NL+ +V+ Sbjct: 177 VAADIKRLLKIPDGNHIQTGFERENLRFQVVK 208 [168][TOP] >UniRef100_C7PQ71 ATP-dependent DNA helicase, RecQ family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PQ71_CHIPD Length = 634 Score = 65.1 bits (157), Expect = 3e-09 Identities = 58/174 (33%), Positives = 79/174 (45%), Gaps = 6/174 (3%) Frame = +2 Query: 14 RLLE----GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181 RLLE G L+VSPERL S+RF + DG Sbjct: 97 RLLEDARRGKYKFLYVSPERLQSKRFLEYC----------------------------DG 128 Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361 +PV+L+ +DEAHCIS+W ++FRPAYL +A A+ G FP G P VL Sbjct: 129 -------MPVNLLAIDEAHCISQWGYDFRPAYLDIA-AIRG-----YFP--GVP----VL 169 Query: 362 ALTATASVATAAAITSAL--RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 ALTA+A+ I L + + AR+NL S++ KL +L+ Sbjct: 170 ALTASATPEVQQDICEKLLMKRAAIFTKSFARSNLSYSVIEEDNKPEKLKHILQ 223 [169][TOP] >UniRef100_B5JDJ9 ATP-dependent DNA helicase, RecQ family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JDJ9_9BACT Length = 640 Score = 65.1 bits (157), Expect = 3e-09 Identities = 52/167 (31%), Positives = 71/167 (42%), Gaps = 3/167 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 GA+ +L+V+PER+ +ERF + + HA Sbjct: 110 GALKLLYVAPERISNERFFAAIEGHA---------------------------------- 135 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 +SL+V+DEAHCISEW HNFRP YL LA A R VLALTAT Sbjct: 136 -ISLMVIDEAHCISEWGHNFRPEYLKLAIAAKALKVER------------VLALTAT--- 179 Query: 386 ATAAAITSALRTPTVVASDVARTNL---QLSIVRAPTVDAKLPLLLR 517 AT + LR + + T L + +PT ++ +LR Sbjct: 180 ATPTVVEDILREFEIAPAGYVNTGFHRPNLFLAFSPTAASERMEILR 226 [170][TOP] >UniRef100_UPI0001B5799F ATP-dependent DNA helicase RecQ n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B5799F Length = 568 Score = 64.7 bits (156), Expect = 4e-09 Identities = 54/164 (32%), Positives = 69/164 (42%), Gaps = 2/164 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 R+ EGA+D LFVSPE+L A D GG GP Sbjct: 112 RVREGALDFLFVSPEQL--------------------------AKPDVLAMVGGAGP--- 142 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 +L+V+DEAHC+S W H+FRP YL L R P +LALTA Sbjct: 143 ------ALMVVDEAHCVSSWGHDFRPDYLALGRV------------RDRIGHPPLLALTA 184 Query: 374 TASVATAAAITSALRTPTV--VASDVARTNLQLSIVRAPTVDAK 499 +A+ A I LR P + S R + L +VR +AK Sbjct: 185 SAAPPVRADILRHLRMPGAREIVSGFDRPEIHLEVVRHQDEEAK 228 [171][TOP] >UniRef100_UPI0001555E87 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555E87 Length = 327 Score = 64.7 bits (156), Expect = 4e-09 Identities = 53/171 (30%), Positives = 72/171 (42%), Gaps = 2/171 (1%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 + R G + +L +S ERL +ERF +F+ + Sbjct: 95 VMARARSGELKILMISVERLKNERFRNFLNS----------------------------- 125 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 V +SL+V+DEAHCISEW HNFRP YL L D R F + P L Sbjct: 126 ------VQISLLVVDEAHCISEWGHNFRPDYLKLPDY------QRQF------NIPQALL 167 Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLL 511 LTATA+ A + + A+ VV + R NL L + D + LL Sbjct: 168 LTATATPQVIADMQAKFAIAAEDVVTTGFYRPNLNLLVEPVSGHDKRRRLL 218 [172][TOP] >UniRef100_Q8PHX4 DNA helicase n=1 Tax=Xanthomonas axonopodis pv. citri RepID=Q8PHX4_XANAC Length = 598 Score = 64.7 bits (156), Expect = 4e-09 Identities = 49/161 (30%), Positives = 69/161 (42%), Gaps = 2/161 (1%) Frame = +2 Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181 R+E LL G +D+L+V+PERLL++RF S + Sbjct: 98 RVERALLSGDLDLLYVAPERLLTQRFLSLLE----------------------------- 128 Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361 R ++L +DEAHC+S+W H+FRP Y L LH PH P + Sbjct: 129 ------RSRIALFAIDEAHCVSQWGHDFRPEYRQLT-VLH----------ERWPHVPR-M 170 Query: 362 ALTATASVATAAAITSALRTPTV--VASDVARTNLQLSIVR 478 ALTATA T I L S R N++ ++V+ Sbjct: 171 ALTATADPPTQREIAERLDLVDARHFVSSFDRPNIRYTVVQ 211 [173][TOP] >UniRef100_A6AZD9 DNA helicase n=2 Tax=Vibrio parahaemolyticus RepID=A6AZD9_VIBPA Length = 641 Score = 64.7 bits (156), Expect = 4e-09 Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 2/152 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L +S ERL +ERF F+R +V Sbjct: 107 GEIKILMISVERLKNERFREFIR-----------------------------------QV 131 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+SL+V+DEAHCISEW HNFRP YL L + + P L LTATA+ Sbjct: 132 PISLMVVDEAHCISEWGHNFRPDYLKLPQY------------QRELNIPQTLLLTATATP 179 Query: 386 ATAAAITSA--LRTPTVVASDVARTNLQLSIV 475 A + + + + + + R+NL +S++ Sbjct: 180 AVIEDMKNKFDIASDHITVTGFYRSNLDISVI 211 [174][TOP] >UniRef100_Q7ULP2 ATP-dependent DNA helicase RecQ n=1 Tax=Rhodopirellula baltica RepID=Q7ULP2_RHOBA Length = 662 Score = 64.7 bits (156), Expect = 4e-09 Identities = 51/171 (29%), Positives = 69/171 (40%), Gaps = 2/171 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 R+ G +L+VSPER +ERF + + Sbjct: 122 RVRSGHCKLLYVSPERFFNERFRAVLG--------------------------------- 148 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 P+S++ +DEAHC+SEW H+FRP YL L D + P VLALTA Sbjct: 149 --ETPISMLAVDEAHCMSEWGHHFRPDYLRLPDVVE------------EHSIPQVLALTA 194 Query: 374 TASVATAAAITSA--LRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 TA I SA L VV R+NL L + + + LL +L Sbjct: 195 TAPQRVVREIRSAFGLERTDVVKVPTHRSNLHLQCTQVTSRERDERLLEQL 245 [175][TOP] >UniRef100_Q6N0D7 DNA helicase n=1 Tax=Rhodopseudomonas palustris RepID=Q6N0D7_RHOPA Length = 616 Score = 64.7 bits (156), Expect = 4e-09 Identities = 51/168 (30%), Positives = 71/168 (42%), Gaps = 2/168 (1%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 IE +LL+G +D+L+V+PERLL+ R S + Sbjct: 111 IEQQLLKGELDLLYVAPERLLTPRCLSLLA------------------------------ 140 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 R +SL +DEAHC+S+W H+FRP Y+ L+ P PR +A Sbjct: 141 -----RAKISLFAIDEAHCVSQWGHDFRPEYVGLSAIAEKFPN----VPR--------IA 183 Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKL 502 LTATA T I +L S R N++ SIV A+L Sbjct: 184 LTATADALTRREIAERLSLTDAPCFVSSFDRPNIRYSIVDKQNAPAQL 231 [176][TOP] >UniRef100_Q3BQH7 DNA helicase n=1 Tax=Xanthomonas campestris pv. vesicatoria str. 85-10 RepID=Q3BQH7_XANC5 Length = 598 Score = 64.7 bits (156), Expect = 4e-09 Identities = 50/169 (29%), Positives = 72/169 (42%), Gaps = 2/169 (1%) Frame = +2 Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181 R+E LL G +D+L+V+PERLL++RF S + Sbjct: 98 RVERALLSGDLDLLYVAPERLLTQRFLSLLE----------------------------- 128 Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361 R ++L +DEAHC+S+W H+FRP Y L LH PH P + Sbjct: 129 ------RSRIALFAIDEAHCVSQWGHDFRPEYRQLT-VLH----------ERWPHIPR-M 170 Query: 362 ALTATASVATAAAITSALRTPTV--VASDVARTNLQLSIVRAPTVDAKL 502 ALTATA T I L S R N++ ++V+ + +L Sbjct: 171 ALTATADPPTQREIAERLDLVDARHFVSSFDRPNIRYTVVQKDSARKQL 219 [177][TOP] >UniRef100_Q12ZW1 ATP-dependent DNA helicase RecQ n=1 Tax=Rhodopseudomonas palustris BisB5 RepID=Q12ZW1_RHOPS Length = 619 Score = 64.7 bits (156), Expect = 4e-09 Identities = 53/169 (31%), Positives = 73/169 (43%), Gaps = 3/169 (1%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 IE +LL G +D+L+V+PERLL+ R S + Sbjct: 110 IERQLLSGELDLLYVAPERLLTPRCLSMLA------------------------------ 139 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 R +SL +DEAHC+S+W H+FRP Y+ L+ P PR +A Sbjct: 140 -----RAKLSLFAIDEAHCVSQWGHDFRPEYVGLSAIAEKFPN----VPR--------IA 182 Query: 365 LTATASVATAAAITSAL---RTPTVVASDVARTNLQLSIVRAPTVDAKL 502 LTATA T IT L P V+S R N++ +IV A+L Sbjct: 183 LTATADALTRREITERLGLTEAPCFVSS-FDRPNIRYTIVDKQNAPAQL 230 [178][TOP] >UniRef100_B3QWV9 ATP-dependent DNA helicase, RecQ family n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QWV9_CHLT3 Length = 594 Score = 64.7 bits (156), Expect = 4e-09 Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 2/169 (1%) Frame = +2 Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196 + + + +LF++PERL +E F S MR Sbjct: 119 IYQNRLKLLFIAPERLQNEGFLSDMR---------------------------------- 144 Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376 + +SLV +DEAHCISEW ++FRP+Y +A L +L P+ P +LALTAT Sbjct: 145 -QAKISLVAVDEAHCISEWGYDFRPSYQQIASQL------KLIYPK---TRPVMLALTAT 194 Query: 377 AS--VATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 A+ + A + AL+ P + R +L LS+ + K+ +L+ Sbjct: 195 ATEEILKDIAKSLALKNPFIYIGGFERASLSLSVFQLENKREKVLQILK 243 [179][TOP] >UniRef100_B3QDD9 ATP-dependent DNA helicase RecQ n=1 Tax=Rhodopseudomonas palustris TIE-1 RepID=B3QDD9_RHOPT Length = 616 Score = 64.7 bits (156), Expect = 4e-09 Identities = 51/168 (30%), Positives = 71/168 (42%), Gaps = 2/168 (1%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 IE +LL+G +D+L+V+PERLL+ R S + Sbjct: 111 IEQQLLKGELDLLYVAPERLLTPRCLSLLA------------------------------ 140 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 R +SL +DEAHC+S+W H+FRP Y+ L+ P PR +A Sbjct: 141 -----RAKISLFAIDEAHCVSQWGHDFRPEYVGLSAIAEKFPN----VPR--------IA 183 Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKL 502 LTATA T I +L S R N++ SIV A+L Sbjct: 184 LTATADALTRREIAERLSLTDAPCFVSSFDRPNIRYSIVDKQNAPAQL 231 [180][TOP] >UniRef100_A4XP76 ATP-dependent DNA helicase RecQ n=1 Tax=Pseudomonas mendocina ymp RepID=A4XP76_PSEMY Length = 642 Score = 64.7 bits (156), Expect = 4e-09 Identities = 52/162 (32%), Positives = 69/162 (42%), Gaps = 2/162 (1%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 + R G + +L +S ERL +ERF +F+ Sbjct: 94 VMNRARSGELKILMISVERLKNERFRNFIA------------------------------ 123 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 +VP+SL+V+DEAHCISEW HNFRP YL L D R F + VL Sbjct: 124 -----QVPISLLVVDEAHCISEWGHNFRPDYLKLPDY------QRQFGIK------QVLL 166 Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAP 484 LTATA+ A + A+ VV + R NL L + P Sbjct: 167 LTATATPRVIADMREKFAIAEADVVTTGFYRPNLNLLVEPVP 208 [181][TOP] >UniRef100_C8VVA7 ATP-dependent DNA helicase, RecQ family n=2 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVA7_9FIRM Length = 793 Score = 64.7 bits (156), Expect = 4e-09 Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 2/110 (1%) Frame = +2 Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379 R+ + L+V+DEAHC+S+W H+FRP YL++ D + + P +LALTATA Sbjct: 128 RIKLDLLVIDEAHCLSQWGHDFRPDYLNIKDFY-----------QNLNYRPTILALTATA 176 Query: 380 SVATAAAITSALRTP--TVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 + I L P ++ S R NL + I+R KLP L L Sbjct: 177 TPMVQQDILHYLDIPRAKLINSGSDRPNLYMEIIRVDKEKDKLPALRETL 226 [182][TOP] >UniRef100_Q043J3 ATP-dependent DNA helicase RecQ n=2 Tax=Lactobacillus gasseri RepID=Q043J3_LACGA Length = 597 Score = 64.7 bits (156), Expect = 4e-09 Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 2/94 (2%) Frame = +2 Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388 VSLV +DEAHCIS+W H+FRPAY + D + + P +LALTATA+ + Sbjct: 130 VSLVAVDEAHCISQWGHDFRPAYRQIMDGVKSIKSN-----------PNILALTATATPS 178 Query: 389 TAAAITSALRTPTV--VASDVARTNLQLSIVRAP 484 I L+ P+ V + AR NL +V P Sbjct: 179 VQKDIADQLQIPSANYVITSFARPNLSFKVVDNP 212 [183][TOP] >UniRef100_B5W779 ATP-dependent DNA helicase RecQ n=1 Tax=Arthrospira maxima CS-328 RepID=B5W779_SPIMA Length = 739 Score = 64.7 bits (156), Expect = 4e-09 Identities = 52/175 (29%), Positives = 78/175 (44%), Gaps = 3/175 (1%) Frame = +2 Query: 8 EGRLLEGAVDVLFVSPERLLSERFASFM-RAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 E +L+G + +L+V+PERLLS +F F+ R A G Sbjct: 109 ESAILQGQIKLLYVAPERLLSPQFLEFLDRLEAAFG------------------------ 144 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 +S +V+DEAHC+S+W H+FRP Y + SR PH PA+ A Sbjct: 145 --------ISTLVIDEAHCVSDWGHDFRPEYRQIQQV-----RSRY------PHVPAI-A 184 Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 LTATA+ I L+ P V + R+NL ++ + P LL+++ Sbjct: 185 LTATATERVRFDIIKQIVLKQPYVHVASFYRSNLYYQVI-PKQPKKRFPQLLKVI 238 [184][TOP] >UniRef100_UPI000179690F PREDICTED: similar to ATP-dependent DNA helicase Q4 (RecQ protein-like 4) (RecQ4) (RTS), partial n=1 Tax=Equus caballus RepID=UPI000179690F Length = 1145 Score = 64.3 bits (155), Expect = 5e-09 Identities = 45/126 (35%), Positives = 57/126 (45%), Gaps = 8/126 (6%) Frame = +2 Query: 164 GAGGDGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSP 343 GAG GP PV+ +DEAHC+S+WSHNFRP YL + L G F Sbjct: 521 GAGEGGPACLTQLPPVAFACIDEAHCLSQWSHNFRPCYLRVCKVLRERMGVHCF------ 574 Query: 344 HAPAVLALTATASVATA--------AAITSALRTPTVVASDVARTNLQLSIVRAPTVDAK 499 L LTATA+ +TA A + LR P + + NL LS+ D Sbjct: 575 -----LGLTATATRSTARDVAWHLGVAEEAVLRGPVTIPA-----NLHLSVSMDRDPDQA 624 Query: 500 LPLLLR 517 L LL+ Sbjct: 625 LVTLLQ 630 [185][TOP] >UniRef100_UPI0001693854 DNA helicase n=1 Tax=Xanthomonas oryzae pv. oryzicola BLS256 RepID=UPI0001693854 Length = 598 Score = 64.3 bits (155), Expect = 5e-09 Identities = 49/161 (30%), Positives = 69/161 (42%), Gaps = 2/161 (1%) Frame = +2 Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181 R+E LL G +D+L+V+PERLL++RF S + Sbjct: 98 RVERALLSGDLDLLYVAPERLLTQRFLSLLE----------------------------- 128 Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361 R ++L +DEAHC+S+W H+FRP Y L LH PH P + Sbjct: 129 ------RSRIALFAIDEAHCVSQWGHDFRPEYRQLT-VLH----------ERWPHIPR-M 170 Query: 362 ALTATASVATAAAITSALRTPTV--VASDVARTNLQLSIVR 478 ALTATA T I L S R N++ ++V+ Sbjct: 171 ALTATADPPTQREIAERLDLVDARHFVSSFDRPNIRYTVVQ 211 [186][TOP] >UniRef100_UPI00016929C1 ATP-dependent DNA helicase RecQ n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016929C1 Length = 529 Score = 64.3 bits (155), Expect = 5e-09 Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 2/157 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 R ++G + +L+++PERL SERF S M+ Sbjct: 141 RAMQGKIKLLYIAPERLESERFRSLMQG-------------------------------- 168 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 + VS + +DEAHC+S+W H+FRP+Y + + G R P V A TA Sbjct: 169 ---LEVSFIAVDEAHCVSQWGHDFRPSYRAITPFI-GQLRRR----------PLVAAFTA 214 Query: 374 TASVATAAAITSA--LRTPTVVASDVARTNLQLSIVR 478 TA+ I L+ P + + AR NL L+I+R Sbjct: 215 TATNEVTQDIAGLLDLKRPAIHINGFARNNLSLNILR 251 [187][TOP] >UniRef100_Q8Z093 ATP-dependent DNA helicase n=1 Tax=Nostoc sp. PCC 7120 RepID=Q8Z093_ANASP Length = 718 Score = 64.3 bits (155), Expect = 5e-09 Identities = 49/157 (31%), Positives = 68/157 (43%), Gaps = 2/157 (1%) Frame = +2 Query: 8 EGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPG 187 E +L G V +L+V+PERLLSERF F+ Sbjct: 102 EEAILNGKVRLLYVAPERLLSERFLPFLDLVK---------------------------- 133 Query: 188 GRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLAL 367 +V +S+ +DEAHC+SEW H+FRP Y L + P+ P VLAL Sbjct: 134 ---EKVGISIFAIDEAHCVSEWGHDFRPEYRQLKSL-----------RKRYPNVP-VLAL 178 Query: 368 TATASVATAAAITS--ALRTPTVVASDVARTNLQLSI 472 TATA+ A I L+ P++ + R NL + Sbjct: 179 TATATDRVRADIIQQLGLKQPSIHLASFNRQNLYYEV 215 [188][TOP] >UniRef100_Q7MTV2 ATP-dependent DNA helicase RecQ n=1 Tax=Porphyromonas gingivalis RepID=Q7MTV2_PORGI Length = 655 Score = 64.3 bits (155), Expect = 5e-09 Identities = 58/164 (35%), Positives = 69/164 (42%), Gaps = 2/164 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G L+VSPERL SE F S R HA+ Sbjct: 118 GRYKFLYVSPERLGSELFLS--RLHALR-------------------------------- 143 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 VSL+V+DE HCIS+W ++FRPAYL +AD P VLALTATA+ Sbjct: 144 -VSLLVVDECHCISQWGYDFRPAYLSIADIREALPD------------VPVLALTATATR 190 Query: 386 ATAAAITSALR--TPTVVASDVARTNLQLSIVRAPTVDAKLPLL 511 I LR P V+ R NL SI R T D + LL Sbjct: 191 PVIDDIQRILRFPEPNVLRKSFFRPNLSYSIRR--TADKETMLL 232 [189][TOP] >UniRef100_Q0K608 ATP-dependent DNA helicase n=1 Tax=Ralstonia eutropha H16 RepID=Q0K608_RALEH Length = 615 Score = 64.3 bits (155), Expect = 5e-09 Identities = 48/159 (30%), Positives = 68/159 (42%), Gaps = 2/159 (1%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 +E LL G +++L+V+PERL++ RF + Sbjct: 102 VERDLLAGRIEILYVAPERLMTPRFQDLLE------------------------------ 131 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 R+ V L +DEAHC+S+W H+FRP Y+ L+ LH P+ P + A Sbjct: 132 -----RIRVGLFAIDEAHCVSQWGHDFRPEYIQLS-VLH----------ERFPYVPRI-A 174 Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIV 475 LTATA T I AL V S R N++ IV Sbjct: 175 LTATADALTRNEIIERLALDNARVFISSFDRPNIRYRIV 213 [190][TOP] >UniRef100_C6BFV9 ATP-dependent DNA helicase RecQ n=1 Tax=Ralstonia pickettii 12D RepID=C6BFV9_RALP1 Length = 636 Score = 64.3 bits (155), Expect = 5e-09 Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 2/174 (1%) Frame = +2 Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181 ++E L G +D+++V+PERL++ RF + Sbjct: 119 QVERDLAAGRLDLVYVAPERLMTPRFLELLE----------------------------- 149 Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361 R + L +DEAHC+S+W H+FRP Y+ L+ LH PH P + Sbjct: 150 ------RSRIGLFAIDEAHCVSQWGHDFRPEYIQLS-VLH----------ERFPHVPRI- 191 Query: 362 ALTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 ALTATA T I AL V S R N++ +IV + +L +R Sbjct: 192 ALTATADAVTRDEIVERLALTDARVFLSSFDRPNIRYTIVEKDSARQQLLRFIR 245 [191][TOP] >UniRef100_C3K4K1 Putative ATP-dependent DNA helicase n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K4K1_PSEFS Length = 647 Score = 64.3 bits (155), Expect = 5e-09 Identities = 50/158 (31%), Positives = 69/158 (43%), Gaps = 2/158 (1%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 + R G + +L +S ERL +ERF +F+++ Sbjct: 95 VMARARSGELKILMISVERLKNERFRNFLQS----------------------------- 125 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 V +SL+V+DEAHCISEW HNFRP YL L D R F + P L Sbjct: 126 ------VQISLLVVDEAHCISEWGHNFRPDYLKLPDY------QRQF------NIPQALL 167 Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSI 472 LTATA+ A + + A+ VV + R NL L + Sbjct: 168 LTATATPKVIADMQAKFAIAPDDVVTTGFYRPNLNLLV 205 [192][TOP] >UniRef100_B2SSX4 ATP-dependent DNA helicase RecQ n=3 Tax=Xanthomonas oryzae pv. oryzae RepID=B2SSX4_XANOP Length = 598 Score = 64.3 bits (155), Expect = 5e-09 Identities = 49/161 (30%), Positives = 69/161 (42%), Gaps = 2/161 (1%) Frame = +2 Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181 R+E LL G +D+L+V+PERLL++RF S + Sbjct: 98 RVERALLSGDLDLLYVAPERLLTQRFLSLLE----------------------------- 128 Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361 R ++L +DEAHC+S+W H+FRP Y L LH PH P + Sbjct: 129 ------RSRIALFAIDEAHCVSQWGHDFRPEYRQLT-VLH----------ERWPHIPR-M 170 Query: 362 ALTATASVATAAAITSALRTPTV--VASDVARTNLQLSIVR 478 ALTATA T I L S R N++ ++V+ Sbjct: 171 ALTATADPPTQREIAERLDLVDARHFVSSFDRPNIRYTVVQ 211 [193][TOP] >UniRef100_A7Z652 RecQ n=1 Tax=Bacillus amyloliquefaciens FZB42 RepID=A7Z652_BACA2 Length = 496 Score = 64.3 bits (155), Expect = 5e-09 Identities = 37/75 (49%), Positives = 43/75 (57%) Frame = +2 Query: 191 RAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALT 370 R VPVSL V+DEAHCISEW H+FRP Y S+L P R + P VLALT Sbjct: 124 RLKNVPVSLFVIDEAHCISEWGHDFRPDY------------SKLGPFRQALGKPPVLALT 171 Query: 371 ATASVATAAAITSAL 415 ATA+ T +T L Sbjct: 172 ATATKETLRDVTDVL 186 [194][TOP] >UniRef100_A7N1V1 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC BAA-1116 RepID=A7N1V1_VIBHB Length = 641 Score = 64.3 bits (155), Expect = 5e-09 Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 2/152 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L +S ERL +ERF F+R ++ Sbjct: 107 GHIKILMISVERLKNERFREFIR-----------------------------------QI 131 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+SL+V+DEAHCISEW HNFRP YL L + + P L LTATA+ Sbjct: 132 PLSLMVVDEAHCISEWGHNFRPDYLKLPQY------------QRELNIPQTLLLTATATP 179 Query: 386 ATAAAITSA--LRTPTVVASDVARTNLQLSIV 475 A + S + + + R+NL +S+V Sbjct: 180 AVIEDMQSKFDIAGENITVTGFYRSNLDISVV 211 [195][TOP] >UniRef100_A1BCJ6 ATP-dependent DNA helicase RecQ n=1 Tax=Chlorobium phaeobacteroides DSM 266 RepID=A1BCJ6_CHLPD Length = 619 Score = 64.3 bits (155), Expect = 5e-09 Identities = 52/169 (30%), Positives = 71/169 (42%), Gaps = 2/169 (1%) Frame = +2 Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196 LL ++D+L+V+PER ++F ++ Sbjct: 117 LLSNSLDLLYVAPERFTLDQFQEMLK---------------------------------- 142 Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376 RV +S+ V+DEAHCISEW H+FRP YL L+ + LFP V A TAT Sbjct: 143 -RVNISMAVIDEAHCISEWGHDFRPDYLSLSQLV------TLFPDL------PVAAFTAT 189 Query: 377 ASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 A+ I ALR P VV + R NL I +L LL+ Sbjct: 190 ATHQVQRDILDKLALRNPFVVRASFDRANLYYDIRFKENASDQLVALLK 238 [196][TOP] >UniRef100_C8PT51 ATP-dependent DNA helicase RecQ n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PT51_9SPIO Length = 650 Score = 64.3 bits (155), Expect = 5e-09 Identities = 47/155 (30%), Positives = 66/155 (42%), Gaps = 2/155 (1%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 R+ G+V ++++SPE L +ER S + + Sbjct: 119 RIKSGSVKLVYLSPEALAAERTQSILHDAS------------------------------ 148 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 VPVS + +DEAHCISEW H+FRP YL +++ R LALTA Sbjct: 149 ---VPVSCITIDEAHCISEWGHDFRPGYLEISNV------------RAQFSGAVCLALTA 193 Query: 374 TASVATAAAITSALR--TPTVVASDVARTNLQLSI 472 TA+ A IT LR P V + R N+ L + Sbjct: 194 TATAQVRADITVNLRMQAPEVFIAGFNRPNIFLEV 228 [197][TOP] >UniRef100_C7RL39 ATP-dependent DNA helicase RecQ n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RL39_9PROT Length = 604 Score = 64.3 bits (155), Expect = 5e-09 Identities = 48/158 (30%), Positives = 69/158 (43%), Gaps = 2/158 (1%) Frame = +2 Query: 8 EGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPG 187 E RL G +D+++V+PERLL++RF + Sbjct: 100 ERRLQAGELDLIYVAPERLLTDRFIGLLEQ------------------------------ 129 Query: 188 GRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLAL 367 R VSL +DEAHC+S+W H+FRP Y+ L+ PG PR +AL Sbjct: 130 -LIARDQVSLFAIDEAHCVSQWGHDFRPEYIQLSQLHERFPGI----PR--------IAL 176 Query: 368 TATASVATAAAITS--ALRTPTVVASDVARTNLQLSIV 475 TATA T I S +L + + R N++ +IV Sbjct: 177 TATADQLTRQEIVSRLSLEDARLFVASFDRPNIRYTIV 214 [198][TOP] >UniRef100_B9ATT5 Putative uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 RepID=B9ATT5_BIFBR Length = 700 Score = 64.3 bits (155), Expect = 5e-09 Identities = 46/156 (29%), Positives = 64/156 (41%), Gaps = 2/156 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L+V+PERL + RF F A R Sbjct: 169 GQLKLLYVAPERLETGRFRDF-----------------------------------AART 193 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+SL+ +DEAHC+S+W +FR +YL + D + G P P V A TATA+ Sbjct: 194 PISLIAVDEAHCVSQWGQDFRSSYLGIGDFI-----------VGLPKRPPVGAFTATATE 242 Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPT 487 I LR P V + R NL +V+ T Sbjct: 243 RVRRDIVGLLGLRNPAVTVTGFDRPNLYFDVVKLET 278 [199][TOP] >UniRef100_A8TBP0 Putative ATP-dependent DNA helicase RecQ (Fragment) n=1 Tax=Vibrio sp. AND4 RepID=A8TBP0_9VIBR Length = 488 Score = 64.3 bits (155), Expect = 5e-09 Identities = 48/152 (31%), Positives = 65/152 (42%), Gaps = 2/152 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + VL +S ERL +ERF F+R ++ Sbjct: 107 GQIKVLMISVERLKNERFREFIR-----------------------------------QI 131 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+SL+V+DEAHCISEW HNFRP YL L + + P L LTATA+ Sbjct: 132 PLSLMVVDEAHCISEWGHNFRPDYLKLPQY------------QRELNIPQTLLLTATATP 179 Query: 386 ATAAAITSA--LRTPTVVASDVARTNLQLSIV 475 A + S + + + R NL LS+V Sbjct: 180 AVIEDMQSKFNIAHENITVTGFYRPNLDLSMV 211 [200][TOP] >UniRef100_A7BWU5 ATP-dependent DNA helicase RecQ n=1 Tax=Beggiatoa sp. PS RepID=A7BWU5_9GAMM Length = 700 Score = 64.3 bits (155), Expect = 5e-09 Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 1/174 (0%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 I G+LL VD+L +SPERL +++F M Sbjct: 108 IRGQLLRNTVDILLISPERLANDQFRENMLLPVADS------------------------ 143 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 + L V+DEAHCIS+W H+FRP Y + + P P+ P VLA Sbjct: 144 --------IGLFVVDEAHCISDWGHDFRPDYRRIKRIVQALP----------PNIP-VLA 184 Query: 365 LTATASVATAAAITSAL-RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 TATA+ A I L + ++ + RT+LQL + P+ A++ L L Sbjct: 185 TTATANDRVIADIQMQLGQNIHLLRGPLTRTSLQLQNIYLPSQAARMAWLAEQL 238 [201][TOP] >UniRef100_A6ARC5 DNA helicase n=1 Tax=Vibrio harveyi HY01 RepID=A6ARC5_VIBHA Length = 641 Score = 64.3 bits (155), Expect = 5e-09 Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 2/152 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L +S ERL +ERF F+R ++ Sbjct: 107 GHIKILMISVERLKNERFREFIR-----------------------------------QI 131 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+SL+V+DEAHCISEW HNFRP YL L + + P L LTATA+ Sbjct: 132 PLSLMVVDEAHCISEWGHNFRPDYLKLPQY------------QRELNIPQTLLLTATATP 179 Query: 386 ATAAAITSA--LRTPTVVASDVARTNLQLSIV 475 A + S + + + R+NL +S+V Sbjct: 180 AVIKDMQSKFDIAGENITVTGFYRSNLDISVV 211 [202][TOP] >UniRef100_Q74ER2 ATP-dependent DNA helicase RecQ n=1 Tax=Geobacter sulfurreducens RepID=Q74ER2_GEOSL Length = 603 Score = 63.9 bits (154), Expect = 6e-09 Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 2/160 (1%) Frame = +2 Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181 R+ RL G +D+L+V+PERL+++ F +R Sbjct: 98 RVLARLHGGELDLLYVAPERLMTDAFLERLR----------------------------- 128 Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361 +P++L +DEAHC+S+W H+FRP Y+ L L G LFP ++ Sbjct: 129 ------EIPIALFAIDEAHCVSQWGHDFRPEYVELG-RLRG-----LFP------TVPMI 170 Query: 362 ALTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIV 475 ALTATA T I + LR + + R N++ S++ Sbjct: 171 ALTATADAQTRGDIVTRLGLRDAEMFVTGFDRPNIRYSVL 210 [203][TOP] >UniRef100_Q6LK00 Putative putative ATP-dependent DNA helicase RecQ n=1 Tax=Photobacterium profundum RepID=Q6LK00_PHOPR Length = 641 Score = 63.9 bits (154), Expect = 6e-09 Identities = 54/168 (32%), Positives = 72/168 (42%), Gaps = 2/168 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G VL +S ERL +ERF F+ +V Sbjct: 103 GETKVLMISVERLKNERFRQFIS-----------------------------------QV 127 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA-- 379 VSL+V+DEAHCISEW HNFRP YL L R + P VL LTATA Sbjct: 128 QVSLLVVDEAHCISEWGHNFRPDYLKLPYY------------RQLLNIPQVLLLTATATP 175 Query: 380 SVATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 +V + + ++ + R NL L+I+ A + KLP L ++L Sbjct: 176 NVIQDMSTKFGIAEQDIIVTGFYRPNLDLTILAAED-ENKLPTLYKVL 222 [204][TOP] >UniRef100_Q5DYC0 ATP-dependent DNA helicase RecQ n=1 Tax=Vibrio fischeri ES114 RepID=Q5DYC0_VIBF1 Length = 638 Score = 63.9 bits (154), Expect = 6e-09 Identities = 46/152 (30%), Positives = 67/152 (44%), Gaps = 2/152 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L +S ERL +ERF F+ ++ Sbjct: 103 GEIKILMISVERLKNERFRQFIA-----------------------------------QI 127 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 +SL+V+DEAHCISEW HNFRP YL L R + + P VL LTATA+ Sbjct: 128 NISLLVVDEAHCISEWGHNFRPDYLKLPQ------------DREALNIPQVLLLTATATP 175 Query: 386 ATAAAITSA--LRTPTVVASDVARTNLQLSIV 475 A ++ + +V + R+NL +SI+ Sbjct: 176 AVIEDMSKKFDIAQDDIVITGFYRSNLDISII 207 [205][TOP] >UniRef100_Q3KJN7 Putative ATP-dependent DNA helicase n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3KJN7_PSEPF Length = 642 Score = 63.9 bits (154), Expect = 6e-09 Identities = 48/156 (30%), Positives = 66/156 (42%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 + R G + +L +S ERL +ERF +F++ Sbjct: 95 VMARARSGELKILMISVERLKNERFRNFLQ------------------------------ 124 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 +VP+SL+V+DEAHCISEW HNFRP YL L D R F R + +L Sbjct: 125 -----QVPISLLVVDEAHCISEWGHNFRPDYLKLPDY------QRQFNIRQT----LLLT 169 Query: 365 LTATASVATAAAITSALRTPTVVASDVARTNLQLSI 472 TAT V ++ VV + R NL L + Sbjct: 170 ATATPKVIADMQAKFSIAEDDVVTTGFYRPNLNLLV 205 [206][TOP] >UniRef100_Q1LI26 ATP-dependent DNA helicase RecQ n=1 Tax=Ralstonia metallidurans CH34 RepID=Q1LI26_RALME Length = 630 Score = 63.9 bits (154), Expect = 6e-09 Identities = 48/159 (30%), Positives = 67/159 (42%), Gaps = 2/159 (1%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 +E LL G +D+L+V+PERL++ RF + Sbjct: 117 VERDLLAGRLDILYVAPERLMTPRFLDLLE------------------------------ 146 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 R V L +DEAHC+S+W H+FRP Y+ L+ LH P P + A Sbjct: 147 -----RTRVGLFAIDEAHCVSQWGHDFRPEYIQLS-VLH----------ERFPRVPRI-A 189 Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIV 475 LTATA T I AL +V S R N++ I+ Sbjct: 190 LTATADALTRQEIVERLALDEASVFISSFDRPNIRYRII 228 [207][TOP] >UniRef100_Q1I6V3 ATP-dependent DNA helicase n=1 Tax=Pseudomonas entomophila L48 RepID=Q1I6V3_PSEE4 Length = 715 Score = 63.9 bits (154), Expect = 6e-09 Identities = 44/137 (32%), Positives = 59/137 (43%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 + GRL G V +L+++PERL+ R F+R Sbjct: 99 LAGRLRRGEVKMLYLAPERLVQPRMLEFLRG----------------------------- 129 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 + VSL +DEAHC+S+W H+FRP YL L + LF PH P + A Sbjct: 130 ------LEVSLFAIDEAHCVSQWGHDFRPEYLQLGQL------AELF-----PHVPRI-A 171 Query: 365 LTATASVATAAAITSAL 415 LTATA + T I L Sbjct: 172 LTATADMRTREEIVQRL 188 [208][TOP] >UniRef100_B2GG45 Putative ATP-dependent DNA helicase n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GG45_KOCRD Length = 716 Score = 63.9 bits (154), Expect = 6e-09 Identities = 55/180 (30%), Positives = 76/180 (42%), Gaps = 7/180 (3%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 I L G +DVL VSPERL + RF + G Sbjct: 114 ISQALDRGEIDVLLVSPERLNNPRFRDEQLPQLVQRLG---------------------- 151 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 L+V+DEAHCIS+W H+FRP Y + D L RL P + AVLA Sbjct: 152 ----------LLVVDEAHCISDWGHDFRPDYRRIKDML-----GRL------PESVAVLA 190 Query: 365 LTATASVATAAAITSALRTPTVVASDV-------ARTNLQLSIVRAPTVDAKLPLLLRLL 523 TATA+ + L + + +V +R +L+L ++R P+ A+L LL L Sbjct: 191 TTATANERVIEDVREQLGVGSGYSGEVFMLRGPLSRASLRLGVLRLPSTAARLAWLLEHL 250 [209][TOP] >UniRef100_B1JCL1 ATP-dependent DNA helicase RecQ n=1 Tax=Pseudomonas putida W619 RepID=B1JCL1_PSEPW Length = 714 Score = 63.9 bits (154), Expect = 6e-09 Identities = 44/137 (32%), Positives = 59/137 (43%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 + GRL G V +L+++PERL+ R F+R Sbjct: 99 LAGRLRRGEVKMLYLAPERLVQPRMLDFLRG----------------------------- 129 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 + VSL +DEAHC+S+W H+FRP YL L + LF PH P + A Sbjct: 130 ------LDVSLFAIDEAHCVSQWGHDFRPEYLQLGQL------AELF-----PHVPRI-A 171 Query: 365 LTATASVATAAAITSAL 415 LTATA + T I L Sbjct: 172 LTATADMRTREEIVQRL 188 [210][TOP] >UniRef100_Q1Z717 Putative putative ATP-dependent DNA helicase RecQ n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z717_PHOPR Length = 641 Score = 63.9 bits (154), Expect = 6e-09 Identities = 54/168 (32%), Positives = 72/168 (42%), Gaps = 2/168 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G VL +S ERL +ERF F+ +V Sbjct: 103 GETKVLMISVERLKNERFRQFIS-----------------------------------QV 127 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA-- 379 VSL+V+DEAHCISEW HNFRP YL L R + P VL LTATA Sbjct: 128 QVSLLVVDEAHCISEWGHNFRPDYLKLPYY------------RQLLNIPQVLLLTATATP 175 Query: 380 SVATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 +V + + ++ + R NL L+I+ A + KLP L ++L Sbjct: 176 NVIQDMSTKFGIAKQDIIVTGFYRPNLDLTILAAED-ENKLPTLYKVL 222 [211][TOP] >UniRef100_Q1VF27 Putative ATP-dependent DNA helicase RecQ n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1VF27_VIBAL Length = 641 Score = 63.9 bits (154), Expect = 6e-09 Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 2/152 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L +S ERL +ERF F+R +V Sbjct: 107 GQIKILMISVERLKNERFREFIR-----------------------------------QV 131 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+SL+V+DEAHCISEW HNFRP YL L + + P L LTATA+ Sbjct: 132 PISLMVIDEAHCISEWGHNFRPDYLKLPQY------------QRELNIPQSLLLTATATP 179 Query: 386 ATAAAITSA--LRTPTVVASDVARTNLQLSIV 475 A + + + + + R+NL +S++ Sbjct: 180 AVIEDMQKKFDISSEHITVTGFYRSNLDISVI 211 [212][TOP] >UniRef100_C9QMN5 ATP-dependent DNA helicase RecQ family n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QMN5_VIBOR Length = 646 Score = 63.9 bits (154), Expect = 6e-09 Identities = 53/178 (29%), Positives = 76/178 (42%), Gaps = 5/178 (2%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 + ++ +G + +L +S ERL +ERF F+ Sbjct: 104 VMNQIRQGELKILMISVERLKNERFRQFIS------------------------------ 133 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 ++P+SL+V+DEAHCISEW HNFRP YL L L + P L Sbjct: 134 -----QIPLSLLVVDEAHCISEWGHNFRPDYLKLPQYLQ------------ELNIPQALL 176 Query: 365 LTATASVATAAAITSALRTPTVVASDVA-----RTNLQLSIVRAPTVDAKLPLLLRLL 523 LTAT AT + I R ++ +D+ R+NL ++I D K LL LL Sbjct: 177 LTAT---ATQSVIEDMQRKFSIEPNDIIITGFYRSNLDITIAPCEEED-KSEALLELL 230 [213][TOP] >UniRef100_C9LEK0 ATP-dependent DNA helicase RecQ n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LEK0_9BACT Length = 607 Score = 63.9 bits (154), Expect = 6e-09 Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 2/109 (1%) Frame = +2 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 +P+SLV +DEAHC+S+W H+FRP Y+ L L + GS F +ALTATA Sbjct: 128 LPISLVAIDEAHCVSQWGHDFRPEYVQLG-TLRKAFGSAPF-----------MALTATAD 175 Query: 383 VATAAAITSA--LRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 T I L +P V S R NL L++ R KL + R L Sbjct: 176 EVTRQDIRERLNLHSPRVFISSFDRPNLSLNVFRGLNGAEKLKAINRFL 224 [214][TOP] >UniRef100_C1WPH1 ATP-dependent DNA helicase, RecQ family n=1 Tax=Kribbella flavida DSM 17836 RepID=C1WPH1_9ACTO Length = 547 Score = 63.9 bits (154), Expect = 6e-09 Identities = 39/99 (39%), Positives = 49/99 (49%), Gaps = 2/99 (2%) Frame = +2 Query: 212 SLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVAT 391 +L+V+DE HC+S W H+FRP YL L D + P VL LTATAS Sbjct: 138 ALLVVDEVHCVSSWGHDFRPDYLRLGDLV------------DQLGRPVVLGLTATASRPV 185 Query: 392 AAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKL 502 + + LR P VV S R NL L+ V A D +L Sbjct: 186 RSEVVERLRLRDPLVVVSGFDRPNLSLAAVPATDADGRL 224 [215][TOP] >UniRef100_C0XBN4 ATP-dependent helicase n=1 Tax=Lactobacillus gasseri JV-V03 RepID=C0XBN4_9LACO Length = 475 Score = 63.9 bits (154), Expect = 6e-09 Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 2/94 (2%) Frame = +2 Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388 +SLV +DEAHCIS+W H+FRPAY + D + + P +LALTATA+ + Sbjct: 130 ISLVAVDEAHCISQWGHDFRPAYRQIMDGVKSIKSN-----------PNILALTATATPS 178 Query: 389 TAAAITSALRTP--TVVASDVARTNLQLSIVRAP 484 I L+ P V + AR NL +V P Sbjct: 179 VQKDIAEQLKIPNKNYVITSFARPNLSFKVVDNP 212 [216][TOP] >UniRef100_C0N5N7 ATP-dependent DNA helicase RecQ n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N5N7_9GAMM Length = 708 Score = 63.9 bits (154), Expect = 6e-09 Identities = 45/138 (32%), Positives = 61/138 (44%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 +E +L G +D+L+V+PERLL ER SF+ Sbjct: 102 VEQQLEAGQIDLLYVAPERLLGERMLSFLE------------------------------ 131 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 R+PV+L +DEAHC+S+W H+FRP Y L R+ R P P + A Sbjct: 132 -----RLPVALFAIDEAHCVSQWGHDFRPEYQQL----------RILHER-FPSVPRI-A 174 Query: 365 LTATASVATAAAITSALR 418 LTATA T I L+ Sbjct: 175 LTATADKRTRIEIIEQLK 192 [217][TOP] >UniRef100_B5GW64 ATP-dependent DNA helicase n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GW64_STRCL Length = 715 Score = 63.9 bits (154), Expect = 6e-09 Identities = 56/176 (31%), Positives = 72/176 (40%), Gaps = 7/176 (3%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFM--RAHAMTGGGGGRGDGTAATDDGDGGAGGD 178 I+ + G VDVL VSPERL + F + R A TG Sbjct: 107 IQAEVAAGTVDVLLVSPERLNNPDFRDHVLPRLAAATG---------------------- 144 Query: 179 GPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAV 358 L+V+DEAHCIS+W H+FRP Y L R SP P V Sbjct: 145 ------------LLVVDEAHCISDWGHDFRPDYRRL----------RTMLAELSPDVP-V 181 Query: 359 LALTATASVATAAAITSALRTPT-----VVASDVARTNLQLSIVRAPTVDAKLPLL 511 LA TATA+ A + L T T V+ + R +L L ++R P +L L Sbjct: 182 LATTATANARVTADVAEQLGTGTDGDALVLRGPLDRESLGLGVIRLPDAATRLAWL 237 [218][TOP] >UniRef100_A7K3L3 Superfamily II DNA helicase n=2 Tax=Vibrio sp. Ex25 RepID=A7K3L3_9VIBR Length = 677 Score = 63.9 bits (154), Expect = 6e-09 Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 2/160 (1%) Frame = +2 Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181 R+ + G + +L +S ERL +ERF F+R Sbjct: 135 RVMAGVKNGQIKILMISVERLKNERFREFIR----------------------------- 165 Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361 +VP+SL+V+DEAHCISEW HNFRP YL L + + P L Sbjct: 166 ------QVPISLMVVDEAHCISEWGHNFRPDYLKLPQY------------QRELNIPQSL 207 Query: 362 ALTATASVATAAAITSA--LRTPTVVASDVARTNLQLSIV 475 LTATA+ A + + + + + R NL +S++ Sbjct: 208 LLTATATPAVIEDMKQKFDIASEHITVTGFYRPNLDISVI 247 [219][TOP] >UniRef100_A0ACI1 Putative modular polyketide synthase n=1 Tax=Streptomyces ambofaciens ATCC 23877 RepID=A0ACI1_STRAM Length = 6726 Score = 63.9 bits (154), Expect = 6e-09 Identities = 61/154 (39%), Positives = 65/154 (42%), Gaps = 16/154 (10%) Frame = +1 Query: 109 RRRRRSRRRHRRHRRR*RRGR--RRRPGGPRPPGARVPRCAGRGPLHL*VVP*LPPRVPA 282 RRRR RR R RR RGR RRRP R GAR P R P P LP R Sbjct: 2523 RRRRDGRRLPRGARRTAGRGRPARRRPLRHRRGGARGPAPRLRRPRRTTPRPDLPAR--- 2579 Query: 283 PGRRAA-------RLAWQPPLPPPRVPSRAGGAGADRHRQRGH----RGGHHVGAAHANS 429 PGR AA R + PLP R R G+ DRHR R RG H G Sbjct: 2580 PGRDAAPGPPGAHRRPGRHPLPAARRARRRSGSAVDRHRGRRRRGRGRGTHQPGPGRRVG 2639 Query: 430 GGERRGADQPAAV---HSPRAHRGRQAPAPPPAA 522 G RGA P + P R R+ PAP AA Sbjct: 2640 PGPGRGAGTPPPLGRSGRPARRRPRRRPAPRRAA 2673 [220][TOP] >UniRef100_A9URZ3 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9URZ3_MONBE Length = 1241 Score = 63.9 bits (154), Expect = 6e-09 Identities = 50/170 (29%), Positives = 74/170 (43%), Gaps = 2/170 (1%) Frame = +2 Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196 +LEG +DVLF++PE L++ + A Sbjct: 653 VLEGRIDVLFIAPETLITSWLQQLLLHRD------------------------------A 682 Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376 PR+ + V DEAHC+SEWSHNFRPAYL +A L G +LALTAT Sbjct: 683 PRIAFATV--DEAHCVSEWSHNFRPAYLRIAGVLQNVFG-----------VHNILALTAT 729 Query: 377 ASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A++ T +I + + ++ +NLQL+ +L LL++ Sbjct: 730 ATLVTQRSIQTHLGIEDSGIIRLFSVPSNLQLAASTPMDRKQRLVYLLKV 779 [221][TOP] >UniRef100_Q2FSZ9 ATP-dependent DNA helicase RecQ n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FSZ9_METHJ Length = 606 Score = 63.9 bits (154), Expect = 6e-09 Identities = 49/173 (28%), Positives = 74/173 (42%), Gaps = 2/173 (1%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 IEG +L+G++ +L++SPERL+ F F+++ Sbjct: 102 IEGSILDGSLKLLYISPERLVQPSFIEFLKS----------------------------- 132 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 +SL +DEAHCIS+W H FRP Y L+ R P ++A Sbjct: 133 ------TRISLFAIDEAHCISQWGHEFRPEYRKLS-----------IIRRTFADVP-IIA 174 Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 LTATA+ + + I S +L P V R NL IV+ + +L L+ Sbjct: 175 LTATATPSVRSDIISELSLHNPAVFVGSFNRENLIYRIVKKEDGEQQLVQFLK 227 [222][TOP] >UniRef100_UPI0001AF409A ATP-dependent DNA helicase RecQ n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF409A Length = 644 Score = 63.5 bits (153), Expect = 8e-09 Identities = 50/156 (32%), Positives = 66/156 (42%), Gaps = 2/156 (1%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 + R G + +L +S ERL +ERF +F+ Sbjct: 95 VMARARSGELKILMISVERLKNERFRNFIA------------------------------ 124 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 +VP+SL+V+DEAHCISEW HNFRP YL L D R F + P L Sbjct: 125 -----QVPISLLVVDEAHCISEWGHNFRPDYLKLPDY------QREF------NIPQTLL 167 Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQL 466 LTATA+ + A+ VV + R NL L Sbjct: 168 LTATATPQVIIDMQDKFAIAPDDVVTTGFYRANLHL 203 [223][TOP] >UniRef100_Q9CEM9 ATP-dependent DNA helicase RecQ n=1 Tax=Lactococcus lactis subsp. lactis RepID=Q9CEM9_LACLA Length = 592 Score = 63.5 bits (153), Expect = 8e-09 Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 2/153 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +LFV+PER + F +F++ ++ Sbjct: 104 GEIKLLFVAPERFSLDYFNAFLQ-----------------------------------KL 128 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+ LV +DEAHCIS+W H+FRP+Y+ A L P + P VLALTATA+ Sbjct: 129 PIDLVAIDEAHCISQWGHDFRPSYVDFASHLQYLPTN-----------PTVLALTATATP 177 Query: 386 ATAAAITSALR-TPT-VVASDVARTNLQLSIVR 478 A I L +P+ + + R NL+ +V+ Sbjct: 178 KVADDIQKLLSISPSHTIKTGFLRENLRFEVVK 210 [224][TOP] >UniRef100_Q8XV07 Probable atp-dependent dna helicase protein n=1 Tax=Ralstonia solanacearum RepID=Q8XV07_RALSO Length = 637 Score = 63.5 bits (153), Expect = 8e-09 Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 2/174 (1%) Frame = +2 Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181 ++E L G +D+++V+PERL++ RF + Sbjct: 119 QVERDLAAGRLDLVYVAPERLMTPRFLELLE----------------------------- 149 Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361 R + L +DEAHC+S+W H+FRP Y+ L+ LH PH P + Sbjct: 150 ------RSRIGLFAIDEAHCVSQWGHDFRPEYIQLS-VLH----------ERFPHVPRI- 191 Query: 362 ALTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 ALTATA T I AL V S R N++ +IV + +L +R Sbjct: 192 ALTATADAVTRDEIVERLALGGARVFLSSFDRPNIRYTIVEKDSARQQLLRFIR 245 [225][TOP] >UniRef100_Q8EEK1 RecQ domain protein n=1 Tax=Shewanella oneidensis RepID=Q8EEK1_SHEON Length = 654 Score = 63.5 bits (153), Expect = 8e-09 Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 2/152 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L VS ER +ERF F+++ + Sbjct: 115 GQLKLLMVSVERFKNERFRQFIQS-----------------------------------I 139 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS- 382 P+S++V+DEAHCISEW HNFRP YL L D P VL LTATA+ Sbjct: 140 PLSMLVVDEAHCISEWGHNFRPDYLKLPDYCR------------ELSIPLVLLLTATATR 187 Query: 383 -VATAAAITSALRTPTVVASDVARTNLQLSIV 475 V AI ++ +V + R+NL L+++ Sbjct: 188 KVKQDMAIRFDIKPQHIVQTGFYRSNLDLTVL 219 [226][TOP] >UniRef100_Q82S01 ATP-dependent DNA helicase RecQ n=1 Tax=Nitrosomonas europaea RepID=Q82S01_NITEU Length = 549 Score = 63.5 bits (153), Expect = 8e-09 Identities = 41/137 (29%), Positives = 60/137 (43%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 +E R+L G D+++V+PERLL+ RF + ++ Sbjct: 99 VERRMLAGEYDLVYVAPERLLTVRFRALLQ------------------------------ 128 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 R+P++L +DEAHC+S+W H+FRP Y G P P P + A Sbjct: 129 -----RIPIALFAIDEAHCVSQWGHDFRPEY-----------GKLSILPEKFPQIPRI-A 171 Query: 365 LTATASVATAAAITSAL 415 LTA+A T A I L Sbjct: 172 LTASADARTRADILRCL 188 [227][TOP] >UniRef100_Q221Z2 ATP-dependent DNA helicase RecQ n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221Z2_RHOFD Length = 653 Score = 63.5 bits (153), Expect = 8e-09 Identities = 56/168 (33%), Positives = 73/168 (43%), Gaps = 2/168 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L +S ERL +ERF +F+ +V Sbjct: 102 GQLKILMISVERLKNERFRNFIA-----------------------------------QV 126 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+SL+V+DEAHCISEW HNFRP YL L R F P L LTATA+ Sbjct: 127 PISLLVVDEAHCISEWGHNFRPDYLKLPHY------QRQF------GIPQTLLLTATATP 174 Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 A + + A+ VV + R NL L +V A + KL LL L Sbjct: 175 PVVADMQTRFAIAAHDVVTTGFYRPNLHL-LVEAVSGRDKLQRLLEWL 221 [228][TOP] >UniRef100_Q1D2X3 ATP-dependent DNA helicase, RecQ family n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D2X3_MYXXD Length = 661 Score = 63.5 bits (153), Expect = 8e-09 Identities = 51/166 (30%), Positives = 68/166 (40%), Gaps = 4/166 (2%) Frame = +2 Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196 L +G++ +L+V+PER +ERF + +R Sbjct: 121 LRDGSLKLLYVAPERFNNERFTALLR---------------------------------- 146 Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376 + +SL +DEAHC+SEW HNFRP YL LA A R +LALTAT Sbjct: 147 -ELRISLFAVDEAHCVSEWGHNFRPDYLKLAKAARDLSAER------------ILALTAT 193 Query: 377 ASVATAAAITSALRTP--TVVASDVARTNLQLSI--VRAPTVDAKL 502 A+ + I P V + R NL L V A DA L Sbjct: 194 ATPSVVRDICQGFGIPEENAVVTGFYRQNLTLETTPVHAEARDAFL 239 [229][TOP] >UniRef100_Q0HV37 ATP-dependent DNA helicase, RecQ family n=1 Tax=Shewanella sp. MR-7 RepID=Q0HV37_SHESR Length = 665 Score = 63.5 bits (153), Expect = 8e-09 Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 2/152 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L VS ER +ERF F+++ + Sbjct: 122 GELKLLMVSVERFKNERFRQFIQS-----------------------------------I 146 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS- 382 P+S++V+DEAHCISEW HNFRP YL L D R P VL LTATA+ Sbjct: 147 PISMLVVDEAHCISEWGHNFRPDYLKLPDY------------RRELAIPLVLLLTATATR 194 Query: 383 -VATAAAITSALRTPTVVASDVARTNLQLSIV 475 V A ++ +V + R+NL L+++ Sbjct: 195 KVKLDMAARFDIKPQHIVQTGFYRSNLDLTVL 226 [230][TOP] >UniRef100_Q0HIU7 ATP-dependent DNA helicase, RecQ family n=1 Tax=Shewanella sp. MR-4 RepID=Q0HIU7_SHESM Length = 658 Score = 63.5 bits (153), Expect = 8e-09 Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 2/152 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L VS ER +ERF F+++ + Sbjct: 115 GELKLLMVSVERFKNERFRQFIQS-----------------------------------I 139 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS- 382 P+S++V+DEAHCISEW HNFRP YL L D R P VL LTATA+ Sbjct: 140 PISMLVVDEAHCISEWGHNFRPDYLKLPDY------------RRELAIPLVLLLTATATR 187 Query: 383 -VATAAAITSALRTPTVVASDVARTNLQLSIV 475 V A ++ +V + R+NL L+++ Sbjct: 188 KVKLDMAARFDIKPQHIVQTGFYRSNLDLTVL 219 [231][TOP] >UniRef100_C4XPI2 ATP-dependent DNA helicase RecQ n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XPI2_DESMR Length = 743 Score = 63.5 bits (153), Expect = 8e-09 Identities = 45/151 (29%), Positives = 66/151 (43%), Gaps = 2/151 (1%) Frame = +2 Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196 L G +D+L+ +PER +++ FA+ + Sbjct: 102 LRRGELDILYTAPERFMTQGFANLLAG--------------------------------- 128 Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376 +P++L +DEAHC+S+W H+FRP YL LA H PG PR +ALTAT Sbjct: 129 --LPLALFAIDEAHCVSQWGHDFRPEYLQLASIAHDFPG----VPR--------MALTAT 174 Query: 377 ASVATAAAITSALR--TPTVVASDVARTNLQ 463 A T A I + L V A+ R N++ Sbjct: 175 ADGPTRADILTRLELSQARVFATGFDRPNIR 205 [232][TOP] >UniRef100_B7VKE2 ATP-dependent DNA helicase recQ n=1 Tax=Vibrio splendidus LGP32 RepID=B7VKE2_VIBSL Length = 644 Score = 63.5 bits (153), Expect = 8e-09 Identities = 49/151 (32%), Positives = 64/151 (42%), Gaps = 2/151 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G +L +S ERL +ERF F+ +V Sbjct: 103 GDTKILMISVERLKNERFRQFIS-----------------------------------QV 127 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+SL+V+DEAHCISEW HNFRP YL L + + P VL LTATA+ Sbjct: 128 PISLLVVDEAHCISEWGHNFRPDYLKLPQY------------QKQLNIPQVLLLTATATT 175 Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSI 472 + + S + VV + R NL LSI Sbjct: 176 SVIQDMKSKFEIDEERVVVTGFYRQNLDLSI 206 [233][TOP] >UniRef100_B6EQ04 Putative ATP-dependent DNA helicase n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EQ04_ALISL Length = 639 Score = 63.5 bits (153), Expect = 8e-09 Identities = 46/152 (30%), Positives = 67/152 (44%), Gaps = 2/152 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L +S ERL +ERF F+ ++ Sbjct: 104 GDIKILMISVERLKNERFRQFIA-----------------------------------QI 128 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 +SL+V+DEAHCISEW HNFRP YL L R + + P VL LTATA+ Sbjct: 129 NISLLVVDEAHCISEWGHNFRPDYLKLPQ------------DREALNIPHVLLLTATATP 176 Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIV 475 A ++ + +V + R+NL +SI+ Sbjct: 177 AVIEDMSKKFKIEKDDIVITGFYRSNLDISII 208 [234][TOP] >UniRef100_B3R7T4 ATP-dependent DNA helicase n=1 Tax=Cupriavidus taiwanensis RepID=B3R7T4_CUPTR Length = 615 Score = 63.5 bits (153), Expect = 8e-09 Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 2/159 (1%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 +E LL G +++L+V+PERL++ RF + Sbjct: 102 VERDLLAGRIEILYVAPERLMTPRFLDLLE------------------------------ 131 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 R V L +DEAHC+S+W H+FRP Y+ L+ LH P+ P + A Sbjct: 132 -----RTRVGLFAIDEAHCVSQWGHDFRPEYIQLS-VLH----------ERFPYVPRI-A 174 Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIV 475 LTATA T I AL + S R N++ IV Sbjct: 175 LTATADALTRDEIVERLALHDARIFISSFDRPNIRYRIV 213 [235][TOP] >UniRef100_B2UEM7 ATP-dependent DNA helicase RecQ n=1 Tax=Ralstonia pickettii 12J RepID=B2UEM7_RALPJ Length = 637 Score = 63.5 bits (153), Expect = 8e-09 Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 2/174 (1%) Frame = +2 Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181 ++E L G +D+++V+PERL++ RF + Sbjct: 119 QVERDLAAGRLDLVYVAPERLMTPRFLELLE----------------------------- 149 Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361 R + L +DEAHC+S+W H+FRP Y+ L+ LH PH P + Sbjct: 150 ------RSRIGLFAIDEAHCVSQWGHDFRPEYIQLS-VLH----------ERFPHVPRI- 191 Query: 362 ALTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 ALTATA T I AL V S R N++ +IV + +L +R Sbjct: 192 ALTATADAVTRDEIIERLALTGSRVFLSSFDRPNIRYTIVEKDSARQQLLRFIR 245 [236][TOP] >UniRef100_A0KWR1 ATP-dependent DNA helicase, RecQ family n=1 Tax=Shewanella sp. ANA-3 RepID=A0KWR1_SHESA Length = 658 Score = 63.5 bits (153), Expect = 8e-09 Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 2/152 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G + +L VS ER +ERF F+++ + Sbjct: 115 GELKLLMVSVERFKNERFRQFIQS-----------------------------------I 139 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS- 382 P+S++V+DEAHCISEW HNFRP YL L D R P VL LTATA+ Sbjct: 140 PISMLVVDEAHCISEWGHNFRPDYLKLPDY------------RRELAIPLVLLLTATATR 187 Query: 383 -VATAAAITSALRTPTVVASDVARTNLQLSIV 475 V A ++ +V + R+NL L+++ Sbjct: 188 KVKLDMAARFDIKPQHIVQTGFYRSNLDLTVL 219 [237][TOP] >UniRef100_C7TCD8 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus rhamnosus GG RepID=C7TCD8_LACRG Length = 469 Score = 63.5 bits (153), Expect = 8e-09 Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 2/110 (1%) Frame = +2 Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379 ++ + L+V+DEAHCIS+W +FRPAYL L R H AVLALTATA Sbjct: 127 QLDLGLLVIDEAHCISQWGPDFRPAYLQLGRV------------RAQLHVDAVLALTATA 174 Query: 380 SVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 + I + A++ P +A V R N+ L + K L++LL Sbjct: 175 PNQVRSDILNQLAMQNPNTIADSVDRPNIFLGVEMCQNEQEKHQRLVQLL 224 [238][TOP] >UniRef100_C5EPJ0 ATP-dependent DNA helicase RecQ n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EPJ0_9FIRM Length = 824 Score = 63.5 bits (153), Expect = 8e-09 Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 2/151 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G +++V+PERL+SE F F A+ G RV Sbjct: 104 GRYPIIYVAPERLMSEDFLRF----ALDG-----------------------------RV 130 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 +S+V +DEAHC+S+W +FRP+YL + D ++ P P V A TATA+ Sbjct: 131 KISMVAVDEAHCVSQWGQDFRPSYLKIVDFIN-----------QLPVRPIVSAFTATATA 179 Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSI 472 I LR P V+ + R+NL ++ Sbjct: 180 EVRDDIIDILMLRNPNVMTTGFDRSNLYFAV 210 [239][TOP] >UniRef100_C4RGP4 ATP-dependent DNA helicase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RGP4_9ACTO Length = 572 Score = 63.5 bits (153), Expect = 8e-09 Identities = 43/106 (40%), Positives = 53/106 (50%), Gaps = 2/106 (1%) Frame = +2 Query: 212 SLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVAT 391 +LV +DEAHCIS W ++FRP YL L + G P V+ALTATAS Sbjct: 170 ALVAIDEAHCISAWGYDFRPDYLALGHLIEGL------------GRPPVVALTATASPPV 217 Query: 392 AAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 I + LR VV S + R NL L + PT D + LL LL Sbjct: 218 RDDIIARLRLRDAEVVVSGLDRPNLFLEVAHCPTEDYRWRRLLALL 263 [240][TOP] >UniRef100_C2EMY3 ATP-dependent helicase n=1 Tax=Lactobacillus ultunensis DSM 16047 RepID=C2EMY3_9LACO Length = 588 Score = 63.5 bits (153), Expect = 8e-09 Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 2/94 (2%) Frame = +2 Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388 + LV +DEAHCIS+W H+FRPAY L + ++ P +LALTATA+ A Sbjct: 130 IDLVAVDEAHCISQWGHDFRPAYRQLLEGINSLKSK-----------PNILALTATATPA 178 Query: 389 TAAAITSALRTP--TVVASDVARTNLQLSIVRAP 484 I L P V + AR NL +V +P Sbjct: 179 VQDDIGEQLNIPKENFVITSFARPNLSFKVVNSP 212 [241][TOP] >UniRef100_B5SJL3 Atp-dependent dna helicase protein n=3 Tax=Ralstonia solanacearum RepID=B5SJL3_RALSO Length = 648 Score = 63.5 bits (153), Expect = 8e-09 Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 2/174 (1%) Frame = +2 Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181 ++E L G +D+++V+PERL++ RF + Sbjct: 130 QVERDLAAGRLDLVYVAPERLMTPRFLELLE----------------------------- 160 Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361 R + L +DEAHC+S+W H+FRP Y+ L+ LH PH P + Sbjct: 161 ------RSRIGLFAIDEAHCVSQWGHDFRPEYIQLS-VLH----------ERFPHVPRI- 202 Query: 362 ALTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 ALTATA T I AL V S R N++ +IV + +L +R Sbjct: 203 ALTATADAVTRDEIVERLALGGERVFLSSFDRPNIRYTIVEKDSARQQLLRFIR 256 [242][TOP] >UniRef100_B4X0N0 ATP-dependent DNA helicase, RecQ family n=1 Tax=Alcanivorax sp. DG881 RepID=B4X0N0_9GAMM Length = 633 Score = 63.5 bits (153), Expect = 8e-09 Identities = 48/152 (31%), Positives = 67/152 (44%), Gaps = 2/152 (1%) Frame = +2 Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202 +G++ +L+V+PERL +ERF + R R Sbjct: 104 DGSIKLLYVAPERLANERFLA-----------------------------------RLKR 128 Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382 + +S++ +DEAHC+SEW HNFRP YL LA R VLALTATA+ Sbjct: 129 LSISMMAVDEAHCVSEWGHNFRPDYLKLAQLASDLNVGR------------VLALTATAT 176 Query: 383 VATAAAI--TSALRTPTVVASDVARTNLQLSI 472 A I + ++ V + R NL LSI Sbjct: 177 PQVAEQIRDSFSIAREDHVQTGFFRPNLALSI 208 [243][TOP] >UniRef100_B4D338 ATP-dependent DNA helicase, RecQ family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D338_9BACT Length = 644 Score = 63.5 bits (153), Expect = 8e-09 Identities = 55/170 (32%), Positives = 68/170 (40%), Gaps = 2/170 (1%) Frame = +2 Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196 L G + +L+V+PERL E F +R Sbjct: 101 LRNGTLKLLYVAPERLSGEAFLDRLR---------------------------------- 126 Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376 R +SL+ +DEAHCISEW HNFRP YL LA R+ G VLALTAT Sbjct: 127 -RTRISLMAIDEAHCISEWGHNFRPEYLRLA---------RVVEELG---LHPVLALTAT 173 Query: 377 ASVATAAAITSALRTPTV--VASDVARTNLQLSIVRAPTVDAKLPLLLRL 520 A+ AA I A R V + R NL L + + L RL Sbjct: 174 ATPEVAADICRAFRIARERHVQTSFRRPNLHLRLTPCAAQERLATLTKRL 223 [244][TOP] >UniRef100_A6F761 ATP-dependent DNA helicase RecQ n=1 Tax=Moritella sp. PE36 RepID=A6F761_9GAMM Length = 637 Score = 63.5 bits (153), Expect = 8e-09 Identities = 49/170 (28%), Positives = 71/170 (41%) Frame = +2 Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193 ++ EG V +L +S ERL +ERF F++ Sbjct: 99 KVREGEVKILMISVERLKNERFRRFIK--------------------------------- 125 Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373 +VP+SL+V+DEAHCISEW HNFRP YL L + + +L TA Sbjct: 126 --QVPISLLVIDEAHCISEWGHNFRPDYLKLPQ----------YQKELNIKQALLLTATA 173 Query: 374 TASVATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 T +V ++ ++ + R NL L ++ D KL L R L Sbjct: 174 TPAVIKDMETKFNIKPEDIIQTGFHRANLSL-LMHPIAQDKKLHALTRWL 222 [245][TOP] >UniRef100_A3XVG4 Putative ATP-dependent DNA helicase RecQ n=1 Tax=Vibrio sp. MED222 RepID=A3XVG4_9VIBR Length = 644 Score = 63.5 bits (153), Expect = 8e-09 Identities = 49/151 (32%), Positives = 64/151 (42%), Gaps = 2/151 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G +L +S ERL +ERF F+ +V Sbjct: 103 GDTKILMISVERLKNERFRQFIS-----------------------------------QV 127 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+SL+V+DEAHCISEW HNFRP YL L + + P VL LTATA+ Sbjct: 128 PISLLVVDEAHCISEWGHNFRPDYLKLPQY------------QKQLNIPQVLLLTATATT 175 Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSI 472 + + S + VV + R NL LSI Sbjct: 176 SVIQDMKSKFEIDEERVVVTGFYRQNLDLSI 206 [246][TOP] >UniRef100_A3UUF8 Putative ATP-dependent DNA helicase RecQ n=1 Tax=Vibrio splendidus 12B01 RepID=A3UUF8_VIBSP Length = 644 Score = 63.5 bits (153), Expect = 8e-09 Identities = 49/151 (32%), Positives = 64/151 (42%), Gaps = 2/151 (1%) Frame = +2 Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205 G +L +S ERL +ERF F+ +V Sbjct: 103 GDTKILMISVERLKNERFRQFIS-----------------------------------QV 127 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P+SL+V+DEAHCISEW HNFRP YL L + + P VL LTATA+ Sbjct: 128 PISLLVVDEAHCISEWGHNFRPDYLKLPQY------------QKQLNIPQVLLLTATATT 175 Query: 386 ATAAAITSA--LRTPTVVASDVARTNLQLSI 472 + + S + VV + R NL LSI Sbjct: 176 SVIQDMKSKFDIDEERVVVTGFYRQNLDLSI 206 [247][TOP] >UniRef100_B0XH16 Rothmund-thomson syndrome DNA helicase recq4 n=1 Tax=Culex quinquefasciatus RepID=B0XH16_CULQU Length = 1093 Score = 63.5 bits (153), Expect = 8e-09 Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 4/108 (3%) Frame = +2 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P++ +DEAHC+S+WSHNFRP+YL + L G + +L LTATA+V Sbjct: 476 PIAFACIDEAHCVSQWSHNFRPSYLMICRVLKEKLGVK-----------TILGLTATATV 524 Query: 386 ATAAAITSALRTPT----VVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 T +I L P +++ NL L++ R DA L LL+ Sbjct: 525 QTRVSIVEHLGIPDGTNGIISDIPLPDNLNLTVSRDANRDAALLHLLQ 572 [248][TOP] >UniRef100_B0WK00 Rothmund-thomson syndrome DNA helicase recq4 n=1 Tax=Culex quinquefasciatus RepID=B0WK00_CULQU Length = 1527 Score = 63.5 bits (153), Expect = 8e-09 Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 4/108 (3%) Frame = +2 Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385 P++ +DEAHC+S+WSHNFRP+YL + L G + +L LTATA+V Sbjct: 948 PIAFACIDEAHCVSQWSHNFRPSYLMICRVLKEKLGVK-----------TILGLTATATV 996 Query: 386 ATAAAITSALRTPT----VVASDVARTNLQLSIVRAPTVDAKLPLLLR 517 T +I L P +++ NL L++ R DA L LL+ Sbjct: 997 QTRVSIVEHLGIPDGTNGIISDIPLPDNLNLTVSRDANRDAALLNLLQ 1044 [249][TOP] >UniRef100_UPI00018740FD ATP-dependent DNA helicase domain protein n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=UPI00018740FD Length = 642 Score = 63.2 bits (152), Expect = 1e-08 Identities = 49/156 (31%), Positives = 66/156 (42%), Gaps = 2/156 (1%) Frame = +2 Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184 + R G + +L +S ERL +ERF +F+ Sbjct: 95 VMARARSGELKILMISVERLKNERFRNFIA------------------------------ 124 Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364 +VP+SL+V+DEAHCISEW HNFRP YL L D R F + P L Sbjct: 125 -----QVPISLLVVDEAHCISEWGHNFRPDYLKLPDY------QREF------NIPQALL 167 Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQL 466 LTATA+ + A+ V+ + R NL L Sbjct: 168 LTATATPQVIIDMQDKFAIAPEDVITTGFYRANLHL 203 [250][TOP] >UniRef100_UPI00016C4FD4 ATP-dependent DNA helicase, RecQ family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4FD4 Length = 482 Score = 63.2 bits (152), Expect = 1e-08 Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 2/110 (1%) Frame = +2 Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379 RVP+ L V+DEAHC+S+W H+FRP +L L A+ P VLALTATA Sbjct: 137 RVPIDLFVVDEAHCVSQWGHDFRPDFLALGRAI------------DDLGRPPVLALTATA 184 Query: 380 SVATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523 + + L P VV + R NL L ++ A K LL ++L Sbjct: 185 TPDVIEDVLGRLGIPNADVVHTGFYRPNLTLDVIPAAGDREKCALLSKIL 234