AU193948 ( PFL053b01_r )

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[1][TOP]
>UniRef100_Q2IMJ3 LigA n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IMJ3_ANADE
          Length = 808

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 54/147 (36%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
 Frame = -2

Query: 435 RTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRRPRRRKSKQQREPA--- 265
           R A P++ RA R  HP ARR  + S  R+A PA     AP  RRP R+    QR P    
Sbjct: 100 RRARPRR-RARRRRHPAARRRRAPSARRRAPPAA---PAPAARRPARQGEGGQRHPTPRP 155

Query: 264 --SASTTALRQAKAEGTSNASGGGENAASPAKKEPRTPAAAAAPQGRRPHRRSSGWQSEQ 91
              A   A R   AEG  +A G       PA +  R P A     G R HRR  G     
Sbjct: 156 RRRARRLAARSRAAEG--HARGEARVLPRPAPRARRVPGA-----GARRHRRDEGRGGR- 207

Query: 90  AATHTAPPQQAKAEGTSHPRARRENAA 10
            A   A P +A+  G + PR R   AA
Sbjct: 208 -ARRRARPARARPRGRARPRRRARGAA 233

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 55/169 (32%), Positives = 67/169 (39%), Gaps = 26/169 (15%)
 Frame = -3

Query: 434 AQHSRNRQERSAPATRAR-----GERTRPARPGKRRPRQQPMRPLRGDGRAAGRASSRGS 270
           A+  R R+   A A R R     G   R AR G+   R+   R  R  GRA GRA   G 
Sbjct: 329 ARAGRGRRRARAGAGRGRARAGAGRGRRAARHGRGARRRGGRRARRAGGRAGGRARRAGR 388

Query: 269 QPPQAQQLCDRQKR-RAPVTRAGGERTRP--------ARPKKSRERQPPLPHHRGVGHTA 117
             P A++   R  R R P  R GG R  P        ARP + R  +      R  G  A
Sbjct: 389 AGPGARR--GRGARGRGPARRRGGGRRAPRRGGRGRGARPGRRRRARRRARADRRAGGRA 446

Query: 116 GAVGGR------------ASKQPHTQHPRNRQKRRAPATRARVGRTRPA 6
           G  GGR            A + P  +    R++ R P    R GR RPA
Sbjct: 447 GR-GGRDARGAGGGAPAGAGRGPRVRPEGRRRRARVPGQGRRAGRRRPA 494

[2][TOP]
>UniRef100_UPI00015558E9 PREDICTED: similar to splicing coactivator subunit SRm300, partial
            n=1 Tax=Ornithorhynchus anatinus RepID=UPI00015558E9
          Length = 2677

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 47/147 (31%), Positives = 62/147 (42%), Gaps = 4/147 (2%)
 Frame = -3

Query: 434  AQHSRNRQERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAA--GRASSRGSQPP 261
            A H R+R        R    RT P    + R R  P+   R   RA+   R  SR   PP
Sbjct: 1778 ATHRRSRSRTPLVTRRRSRSRTSPVSRRRSRSRTSPVSRRRSRSRASPVNRRRSRSRTPP 1837

Query: 260  QAQQLCDRQKRRAPVTRAGGE-RTRPARPKKSRERQPPLPHHRGVGHTAGAVGGRASKQP 84
              ++   R + R PVTR     RT P   ++SR R PP+   R    T+     R+  + 
Sbjct: 1838 VTRR---RSRSRTPVTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRT 1894

Query: 83   HTQHPRNRQKRRAPATRARV-GRTRPA 6
                 R  + R +PATR R   RT PA
Sbjct: 1895 SPITRRRSRSRTSPATRRRSRSRTSPA 1921

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 50/148 (33%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
 Frame = -3

Query: 422 RNRQERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAAGRASSRGSQPPQAQQLC 243
           R R     PATR R     PAR G+ R R    R  R   R + R  SR   P +  +  
Sbjct: 441 RGRSRSKTPATRGRSRSRTPARRGRSRSRTPTRR--RSRSRTSTRRRSRSRTPTRRGRSR 498

Query: 242 DR------QKRRAPVTRAGGERTRPARPKKSRERQPPLPHHRGVGHTAGAVGGRA-SKQP 84
            R       + R+PV R    R+ P R  +SR R P     R    T    GGR+ S+ P
Sbjct: 499 SRTPARRRSRTRSPVRRRSRTRS-PVRRGRSRSRTPARRGGRSRSRTPARRGGRSRSRTP 557

Query: 83  HTQHPRNRQKRRAPATRARVGRTR-PAR 3
             +  R+R   R PA R    R+R PAR
Sbjct: 558 ARRGGRSRS--RTPARRGGRSRSRTPAR 583

[3][TOP]
>UniRef100_UPI00016A7139 translation initiation factor IF-2 n=1 Tax=Burkholderia
           oklahomensis C6786 RepID=UPI00016A7139
          Length = 956

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 46/126 (36%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRR-PRRRKSKQQREPA 265
           A R A  +   A R +  +AR E    + R+ A    A A  E    PRR + K    P 
Sbjct: 204 AQREAAKKAEDAAREAADKARAEQEEIRKRREAAEAEARAIREMMNTPRRAQVKAVEPPK 263

Query: 264 SASTTALRQAKAEGTSN--ASGGGENAASPAKKEP--RTPAAAAAPQG---RRPHRRSSG 106
            A   A + A+A+GT +  A   GE AA PA K+P    PA AAAP G   ++P    SG
Sbjct: 264 PAEQPAAKAAEAKGTLHKPAKPAGEAAARPAPKKPAGAAPAPAAAPAGDRAKKPGTGKSG 323

Query: 105 WQSEQA 88
           WQ + A
Sbjct: 324 WQDDAA 329

[4][TOP]
>UniRef100_UPI0000484FB6 serine/arginine repetitive matrix 2 n=2 Tax=Mus musculus
           RepID=UPI0000484FB6
          Length = 2703

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 46/146 (31%), Positives = 58/146 (39%), Gaps = 6/146 (4%)
 Frame = -3

Query: 422 RNRQERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAAGRASSRGSQPPQAQQLC 243
           R R    +PATR R     PAR G+ R R    R  R   R   R  SR   P +  +  
Sbjct: 556 RGRSHSRSPATRGRSRSRTPARRGRSRSRTPARR--RSRSRTPARRRSRSRTPARRGRSR 613

Query: 242 D------RQKRRAPVTRAGGERTRPARPKKSRERQPPLPHHRGVGHTAGAVGGRASKQPH 81
                  R + R+PV R    R++  R  +SR R P     R    T    G   S+ P 
Sbjct: 614 SRTPARRRSRTRSPVRRRSRSRSQARRSGRSRSRTPARRSGRSRSRTPARRGRSRSRTPA 673

Query: 80  TQHPRNRQKRRAPATRARVGRTRPAR 3
            +  R+R   R PA R R     PAR
Sbjct: 674 RRSARSRS--RTPARRGRSRSRTPAR 697

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 42/143 (29%), Positives = 57/143 (39%), Gaps = 1/143 (0%)
 Frame = -3

Query: 434  AQHSRNRQERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAAGRASSRGSQPPQA 255
            A H R+R     P    R  R+R +   +RR R    R  R       R  SR   PP  
Sbjct: 1827 ATHRRSRSR--TPLISRRRSRSRTSPVSRRRSRSVNRRRSRSRASPVSRRRSRSRTPPVT 1884

Query: 254  QQLCDRQKRRAPVTRAGGERTRPARPKKSRERQPPLPHHRGVGHTAGAVGGRASKQPHTQ 75
            ++   R + R P  R    RT P   ++SR R PP+   R    T+     R+  +    
Sbjct: 1885 RR---RSRSRTPTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPVTRRRSRSRTSPV 1941

Query: 74   HPRNRQKRRAPATRARV-GRTRP 9
              R  + R +P TR R   RT P
Sbjct: 1942 TRRRSRSRTSPVTRRRSRSRTSP 1964

[5][TOP]
>UniRef100_Q3TR34 Putative uncharacterized protein (Fragment) n=1 Tax=Mus musculus
           RepID=Q3TR34_MOUSE
          Length = 493

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 46/146 (31%), Positives = 58/146 (39%), Gaps = 6/146 (4%)
 Frame = -3

Query: 422 RNRQERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAAGRASSRGSQPPQAQQLC 243
           R R    +PATR R     PAR G+ R R    R  R   R   R  SR   P +  +  
Sbjct: 250 RGRSHSRSPATRGRSRSRTPARRGRSRSRTPARR--RSRSRTPARRRSRSRTPARRGRSR 307

Query: 242 D------RQKRRAPVTRAGGERTRPARPKKSRERQPPLPHHRGVGHTAGAVGGRASKQPH 81
                  R + R+PV R    R++  R  +SR R P     R    T    G   S+ P 
Sbjct: 308 SRTPARRRSRTRSPVRRRSRSRSQARRSGRSRSRTPARRSGRSRSRTPARRGRSRSRTPA 367

Query: 80  TQHPRNRQKRRAPATRARVGRTRPAR 3
            +  R+R   R PA R R     PAR
Sbjct: 368 RRSARSRS--RTPARRGRSRSRTPAR 391

[6][TOP]
>UniRef100_Q8BTI8-3 Isoform 3 of Serine/arginine repetitive matrix protein 2 n=1
           Tax=Mus musculus RepID=Q8BTI8-3
          Length = 2603

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 46/146 (31%), Positives = 58/146 (39%), Gaps = 6/146 (4%)
 Frame = -3

Query: 422 RNRQERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAAGRASSRGSQPPQAQQLC 243
           R R    +PATR R     PAR G+ R R    R  R   R   R  SR   P +  +  
Sbjct: 556 RGRSHSRSPATRGRSRSRTPARRGRSRSRTPARR--RSRSRTPARRRSRSRTPARRGRSR 613

Query: 242 D------RQKRRAPVTRAGGERTRPARPKKSRERQPPLPHHRGVGHTAGAVGGRASKQPH 81
                  R + R+PV R    R++  R  +SR R P     R    T    G   S+ P 
Sbjct: 614 SRTPTRRRSRTRSPVRRRSRSRSQARRSGRSRSRTPARRSGRSRSRTPARRGRSRSRTPA 673

Query: 80  TQHPRNRQKRRAPATRARVGRTRPAR 3
            +  R+R   R PA R R     PAR
Sbjct: 674 RRSARSRS--RTPARRGRSRSRTPAR 697

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 42/143 (29%), Positives = 57/143 (39%), Gaps = 1/143 (0%)
 Frame = -3

Query: 434  AQHSRNRQERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAAGRASSRGSQPPQA 255
            A H R+R     P    R  R+R +   +RR R    R  R       R  SR   PP  
Sbjct: 1827 ATHRRSRS--ITPLISRRRSRSRTSPVSRRRSRSVNRRRSRSRASPVSRRRSRSRTPPVT 1884

Query: 254  QQLCDRQKRRAPVTRAGGERTRPARPKKSRERQPPLPHHRGVGHTAGAVGGRASKQPHTQ 75
            ++   R + R P  R    RT P   ++SR R PP+   R    T+     R+  +    
Sbjct: 1885 RR---RSRSRTPTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPVTRRRSRSRTSPV 1941

Query: 74   HPRNRQKRRAPATRARV-GRTRP 9
              R  + R +P TR R   RT P
Sbjct: 1942 TRRRSRSRTSPVTRRRSRSRTSP 1964

[7][TOP]
>UniRef100_Q8BTI8 Serine/arginine repetitive matrix protein 2 n=2 Tax=Mus musculus
           RepID=SRRM2_MOUSE
          Length = 2703

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 46/146 (31%), Positives = 58/146 (39%), Gaps = 6/146 (4%)
 Frame = -3

Query: 422 RNRQERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAAGRASSRGSQPPQAQQLC 243
           R R    +PATR R     PAR G+ R R    R  R   R   R  SR   P +  +  
Sbjct: 556 RGRSHSRSPATRGRSRSRTPARRGRSRSRTPARR--RSRSRTPARRRSRSRTPARRGRSR 613

Query: 242 D------RQKRRAPVTRAGGERTRPARPKKSRERQPPLPHHRGVGHTAGAVGGRASKQPH 81
                  R + R+PV R    R++  R  +SR R P     R    T    G   S+ P 
Sbjct: 614 SRTPTRRRSRTRSPVRRRSRSRSQARRSGRSRSRTPARRSGRSRSRTPARRGRSRSRTPA 673

Query: 80  TQHPRNRQKRRAPATRARVGRTRPAR 3
            +  R+R   R PA R R     PAR
Sbjct: 674 RRSARSRS--RTPARRGRSRSRTPAR 697

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 42/143 (29%), Positives = 57/143 (39%), Gaps = 1/143 (0%)
 Frame = -3

Query: 434  AQHSRNRQERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAAGRASSRGSQPPQA 255
            A H R+R     P    R  R+R +   +RR R    R  R       R  SR   PP  
Sbjct: 1827 ATHRRSRS--ITPLISRRRSRSRTSPVSRRRSRSVNRRRSRSRASPVSRRRSRSRTPPVT 1884

Query: 254  QQLCDRQKRRAPVTRAGGERTRPARPKKSRERQPPLPHHRGVGHTAGAVGGRASKQPHTQ 75
            ++   R + R P  R    RT P   ++SR R PP+   R    T+     R+  +    
Sbjct: 1885 RR---RSRSRTPTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPVTRRRSRSRTSPV 1941

Query: 74   HPRNRQKRRAPATRARV-GRTRP 9
              R  + R +P TR R   RT P
Sbjct: 1942 TRRRSRSRTSPVTRRRSRSRTSP 1964

[8][TOP]
>UniRef100_B0JZC6 LOC779458 protein (Fragment) n=2 Tax=Xenopus (Silurana) tropicalis
           RepID=B0JZC6_XENTR
          Length = 1008

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
 Frame = -2

Query: 363 SQARKAAPA---PAANAAPEGRRPRRRKSKQQREPASASTTALRQAKAEGTSNASGGGEN 193
           S A+ A+PA   PA  A+P  R P +  S  +R PA A+T A +++ A+  + A      
Sbjct: 552 SPAKGASPAKRSPAKGASPAKRSPAKGASPAKRSPAKAATPA-KRSPAKVATPAKRSPAK 610

Query: 192 AASPAKKEP--------RTPAAAAAPQGRRPHRRSSGWQSEQAATHTAPPQQAKAEGTSH 37
            A+PAK+ P        R+PA  A P  R P + +S  +   A   T P +++ A+G S 
Sbjct: 611 VATPAKRSPAKVATPAKRSPAKVATPAKRSPAKAASPAKRSPAKAAT-PAKRSPAKGASP 669

Query: 36  PRARRENAASPA 1
            R     AA+PA
Sbjct: 670 ARRSPAKAATPA 681

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
 Frame = -2

Query: 423 PQQARAERTSHPRARRENSASQARKAAPA---PAANAAPEGRRPRRRKSKQQREPASAST 253
           P +    + + P  +     S A+ A+PA   PA  A+P  R P +  S  +R PA  ++
Sbjct: 488 PSKRSPAKGASPAKKSPAKRSPAKGASPAKRSPAKGASPAKRSPAKGASPAKRSPAKGAS 547

Query: 252 TALRQAKAEGTSNASGGGENAASPAKKEP--------RTPAAAAAPQGRRPHRRSSGWQS 97
            A +++ A+G S A       ASPAK+ P        R+PA AA P  R P + ++  + 
Sbjct: 548 PA-KRSPAKGASPAKRSPAKGASPAKRSPAKGASPAKRSPAKAATPAKRSPAKVATPAKR 606

Query: 96  EQAATHTAPPQQAKAEGTSHPRARRENAASPA 1
             A   T P +++ A+  +  +      A+PA
Sbjct: 607 SPAKVAT-PAKRSPAKVATPAKRSPAKVATPA 637

[9][TOP]
>UniRef100_UPI0000F2DB84 PREDICTED: similar to splicing coactivator subunit SRm300 n=1
            Tax=Monodelphis domestica RepID=UPI0000F2DB84
          Length = 2785

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 47/147 (31%), Positives = 63/147 (42%), Gaps = 5/147 (3%)
 Frame = -3

Query: 434  AQHSRNRQERSAPATRARGE-RTRPARPGKRRPRQQPMRPLRGDGRAA--GRASSRGSQP 264
            A H R+R  R+ P TR R   RT P    + R R  P+   R   RA+   R  SR   P
Sbjct: 1881 ATHRRSRS-RTPPVTRRRSRSRTSPVSRRRSRSRTSPVTRRRSRSRASPVNRRRSRSRTP 1939

Query: 263  PQAQQLCDRQKRRAPVTRAGGE-RTRPARPKKSRERQPPLPHHRGVGHTAGAVGGRASKQ 87
            P  ++   R + R P  R     RT P   ++SR R PP+   R    T+     R+  +
Sbjct: 1940 PVTRR---RSRSRTPANRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSR 1996

Query: 86   PHTQHPRNRQKRRAPATRARV-GRTRP 9
                  R  + R +P TR R   RT P
Sbjct: 1997 TSPVTRRRSRSRTSPVTRRRSRSRTSP 2023

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 48/155 (30%), Positives = 59/155 (38%), Gaps = 15/155 (9%)
 Frame = -3

Query: 422  RNRQERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAAGRASSRGSQPPQAQQLC 243
            R R    +PATR R     PAR G+ R R    R  R   R   R  SR   P +  +  
Sbjct: 568  RGRSRSRSPATRGRSRSRTPARRGRSRSRTPARR--RSRSRTPARRRSRSRTPARRGRSR 625

Query: 242  DR------QKRRAPVTRAGGERTRPARPKKSRERQPPLPHHRGVGHTAGAVGGRA-SKQP 84
             R       + R+PV R    R+   R  +SR R P     R    T    GGR+ S+ P
Sbjct: 626  SRTPARRRSRTRSPVRRRSRTRSPARRGGRSRSRTPARRGGRSRSRTPARRGGRSRSRTP 685

Query: 83   --------HTQHPRNRQKRRAPATRARVGRTRPAR 3
                     T   R R + R PA R R     P R
Sbjct: 686  ARRGRSRSRTPARRGRTRSRTPARRGRSRTRSPVR 720

[10][TOP]
>UniRef100_UPI0000DC1A1B UPI0000DC1A1B related cluster n=1 Tax=Rattus norvegicus
           RepID=UPI0000DC1A1B
          Length = 491

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 46/146 (31%), Positives = 58/146 (39%), Gaps = 6/146 (4%)
 Frame = -3

Query: 422 RNRQERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAAGRASSRGSQPPQAQQLC 243
           R R    +PATR R     PAR G+ R R    R  R   R   R  SR   P +  +  
Sbjct: 248 RGRSHSRSPATRGRSRSRTPARRGRSRSRTPARR--RSRSRTPARRRSRSRTPARRGRSR 305

Query: 242 D------RQKRRAPVTRAGGERTRPARPKKSRERQPPLPHHRGVGHTAGAVGGRASKQPH 81
                  R + R+PV R    R++  R  +SR R P     R    T    G   S+ P 
Sbjct: 306 SRTPTRRRSRTRSPVRRRSRSRSQARRSGRSRSRTPARRSGRSRSRTPARRGRSRSRTPA 365

Query: 80  TQHPRNRQKRRAPATRARVGRTRPAR 3
            +  R+R   R PA R R     PAR
Sbjct: 366 RRSGRSRS--RTPARRGRSRSRTPAR 389

[11][TOP]
>UniRef100_UPI0000DA333B PREDICTED: similar to serine/arginine repetitive matrix 2 n=1
           Tax=Rattus norvegicus RepID=UPI0000DA333B
          Length = 2707

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 46/146 (31%), Positives = 58/146 (39%), Gaps = 6/146 (4%)
 Frame = -3

Query: 422 RNRQERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAAGRASSRGSQPPQAQQLC 243
           R R    +PATR R     PAR G+ R R    R  R   R   R  SR   P +  +  
Sbjct: 555 RGRSHSRSPATRGRSRSRTPARRGRSRSRTPARR--RSRSRTPARRRSRSRTPARRGRSR 612

Query: 242 D------RQKRRAPVTRAGGERTRPARPKKSRERQPPLPHHRGVGHTAGAVGGRASKQPH 81
                  R + R+PV R    R++  R  +SR R P     R    T    G   S+ P 
Sbjct: 613 SRTPTRRRSRTRSPVRRRSRSRSQARRSGRSRSRTPARRSGRSRSRTPARRGRSRSRTPA 672

Query: 80  TQHPRNRQKRRAPATRARVGRTRPAR 3
            +  R+R   R PA R R     PAR
Sbjct: 673 RRSGRSRS--RTPARRGRSRSRTPAR 696

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 43/144 (29%), Positives = 58/144 (40%), Gaps = 2/144 (1%)
 Frame = -3

Query: 434  AQHSRNRQERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAAGRASSRGSQPPQA 255
            A H R+R     P    R  R+R +   +RR R    R  R       R  SR   PP  
Sbjct: 1830 ATHRRSRSR--TPLISRRRSRSRTSPVSRRRSRSVNRRRSRSRASPVSRRRSRSRTPPVT 1887

Query: 254  QQLCDRQKRRAPVTRAGGE-RTRPARPKKSRERQPPLPHHRGVGHTAGAVGGRASKQPHT 78
            ++   R + R P TR     RT P   ++SR R PP+   R    T+     R+  +   
Sbjct: 1888 RR---RSRSRTPTTRRRSRSRTPPVTRRRSRSRSPPVTRRRSRSRTSPVTRRRSRSRTSP 1944

Query: 77   QHPRNRQKRRAPATRARV-GRTRP 9
               R  + R +P TR R   RT P
Sbjct: 1945 VTRRRSRSRTSPVTRRRSRSRTSP 1968

[12][TOP]
>UniRef100_UPI000179CC90 UPI000179CC90 related cluster n=1 Tax=Bos taurus
           RepID=UPI000179CC90
          Length = 2724

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 48/147 (32%), Positives = 63/147 (42%), Gaps = 15/147 (10%)
 Frame = -3

Query: 422 RNRQERSAPATRARGERTRPARPGKRRPRQQPMR------PLRGDGRA---AGRASSRGS 270
           R R    +PATR R     PAR G+ R R    R      P R   R+   A R  SR  
Sbjct: 555 RGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSR 614

Query: 269 QPPQAQQ-----LCDRQKRRAPVTRAGGERTR-PARPKKSRERQPPLPHHRGVGHTAGAV 108
            P + +      +  R + R+P  R+G  R+R PAR  +SR R P     R    T    
Sbjct: 615 TPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARR 674

Query: 107 GGRASKQPHTQHPRNRQKRRAPATRAR 27
            GR+  +  T + R R + R PA R R
Sbjct: 675 SGRS--RSRTPNRRGRSQSRTPARRGR 699

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 43/145 (29%), Positives = 58/145 (40%), Gaps = 3/145 (2%)
 Frame = -3

Query: 434  AQHSRNRQERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAA--GRASSRGSQPP 261
            A H R+R      + R    RT P    + R R    R  R   RA+   R  SR   PP
Sbjct: 1837 ATHRRSRSRTPLVSRRRSRSRTSPVSRRRSRSRTSVTRR-RSRSRASPVSRRRSRSRTPP 1895

Query: 260  QAQQLCDRQKRRAPVTRAGGERTRPARPKKSRERQPPLPHHRGVGHTAGAVGGRASKQPH 81
              ++   R + R P  R    RT P   ++SR R PP+   R    T+     R+  +  
Sbjct: 1896 VTRR---RSRSRTPTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPIARRRSRSRTS 1952

Query: 80   TQHPRNRQKRRAPATRARV-GRTRP 9
                R  + R +P TR R   RT P
Sbjct: 1953 PVTRRRSRSRTSPVTRRRSRSRTSP 1977

[13][TOP]
>UniRef100_A9VXR1 Pseudouridine synthase n=1 Tax=Methylobacterium extorquens PA1
           RepID=A9VXR1_METEP
          Length = 669

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 52/161 (32%), Positives = 66/161 (40%), Gaps = 15/161 (9%)
 Frame = -3

Query: 440 PHAQ-HSRNRQERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAAGRASS----- 279
           PH +   RN +ERSAP  RAR +R R  RPG+ RPR+   RP R +G    RA       
Sbjct: 406 PHRRVRFRNEEERSAPRDRAREDRPRQDRPGQDRPRED--RP-RSEGPRENRARDERPGR 462

Query: 278 ----RGSQPPQAQQLCDRQKRRAPVTRAGGERTRPA----RPKKSRERQPPLPHHRGVGH 123
               RG+    A+         AP  R G  R RP+    RP + R    P     G   
Sbjct: 463 DEFRRGAPAGDARPRRREAGEAAPAERRGPPRERPSDFEGRPPRERSEGRPQRDFHGDSR 522

Query: 122 TAGAVGGRASKQPHTQHPRNRQKRRAPATRARVGR-TRPAR 3
             G    R  +    + P   ++R  P  R R     RPAR
Sbjct: 523 ERGEGAPRRERPSEGRPP---ERRGPPRDRPRAAEGERPAR 560

[14][TOP]
>UniRef100_C7CI29 Pseudouridine synthase n=1 Tax=Methylobacterium extorquens DM4
           RepID=C7CI29_METED
          Length = 669

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 52/161 (32%), Positives = 66/161 (40%), Gaps = 15/161 (9%)
 Frame = -3

Query: 440 PHAQ-HSRNRQERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAAGRASS----- 279
           PH +   RN +ERSAP  RAR +R R  RPG+ RPR+   RP R +G    RA       
Sbjct: 406 PHRRVRFRNEEERSAPRDRAREDRPRQDRPGQDRPRED--RP-RSEGPRENRARDERPGR 462

Query: 278 ----RGSQPPQAQQLCDRQKRRAPVTRAGGERTRPA----RPKKSRERQPPLPHHRGVGH 123
               RG+    A+         AP  R G  R RP+    RP + R    P     G   
Sbjct: 463 DEFRRGAPAGDARPRRREAGEAAPAERRGPPRERPSDFEGRPPRERSEGRPQRDFHGDSR 522

Query: 122 TAGAVGGRASKQPHTQHPRNRQKRRAPATRARVGR-TRPAR 3
             G    R  +    + P   ++R  P  R R     RPAR
Sbjct: 523 ERGEGAPRRERPSEGRPP---ERRGPPRDRPRAAEGERPAR 560

[15][TOP]
>UniRef100_UPI00004D0F0C Antigen KI-67. n=1 Tax=Xenopus (Silurana) tropicalis
            RepID=UPI00004D0F0C
          Length = 1049

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
 Frame = -2

Query: 423  PQQARAERTSHPRARRENSASQARKAAPA---PAANAAPEGRRPRRRKSKQQREPASAST 253
            P +    + + P  +     S A+ A+PA   PA  A+P  R P +  S  +R PA  ++
Sbjct: 583  PSKRSPAKGASPAKKSPAKRSPAKGASPAKRSPAKGASPAKRSPAKGASPAKRSPAKGAS 642

Query: 252  TALRQAKAEGTSNASGGGENAASPAKKEP--------RTPAAAAAPQGRRPHRRSSGWQS 97
             A +++ A+G S A       ASPAK+ P        R+PA  A+P  R P + ++  + 
Sbjct: 643  PA-KRSPAKGASPAKRSPAKGASPAKRSPAKGASPAKRSPAKGASPAKRSPAKAATPAKR 701

Query: 96   EQAATHTAPPQQAKAEGTSHPRARRENAASPA 1
              A   T P +++ A+  +  +     AA+PA
Sbjct: 702  SPAKVAT-PAKRSPAKVATPAKRSPAKAATPA 732

[16][TOP]
>UniRef100_C9M9L0 RNA polymerase major sigma factor n=1 Tax=Jonquetella anthropi
           E3_33 E1 RepID=C9M9L0_9BACT
          Length = 969

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 36/176 (20%)
 Frame = -2

Query: 429 ALPQQARAERTSHPRARRENS------ASQARKAAPAPAANAAPEGRRPRRRKS---KQQ 277
           ++P +A+  + +  +A+          +S A KA  A  A AAPE ++P ++ S   K++
Sbjct: 178 SVPAEAKKAKKASKKAKNAGEDQPAGESSPAMKAPAAEQAEAAPEEKKPAKKSSAGKKKE 237

Query: 276 REP------------------ASASTTALRQAKAEGTSNASGGGENA--ASPAKKEPRTP 157
            EP                  ASA   A +  KA+  +  +G  + A  +SPA K P   
Sbjct: 238 PEPKKAASKPEAAPKEEAKVEASAPAEAKKSKKAQKKAKNAGEDQPAGESSPAMKAPAAE 297

Query: 156 AAAAAPQGRRPHRRSSGWQSEQ-------AATHTAPPQQAKAEGTSHPRARRENAA 10
            A AAP+ ++P ++SS  + ++       +    AP ++AK E ++   A++   A
Sbjct: 298 QAEAAPEEKKPAKKSSAGKKKEPEPKKAASKPEAAPKEEAKVEASAPAEAKKSKKA 353

[17][TOP]
>UniRef100_C5B254 Pseudouridine synthase n=1 Tax=Methylobacterium extorquens AM1
           RepID=C5B254_METEA
          Length = 669

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 52/161 (32%), Positives = 65/161 (40%), Gaps = 15/161 (9%)
 Frame = -3

Query: 440 PHAQ-HSRNRQERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAAGRASS----- 279
           PH +   RN +ERSAP  RAR +R R  RPG+ RPR    RP R +G    RA       
Sbjct: 406 PHRRVRFRNEEERSAPRDRAREDRPRQDRPGQDRPRDD--RP-RSEGPRENRARDERPGR 462

Query: 278 ----RGSQPPQAQQLCDRQKRRAPVTRAGGERTRPA----RPKKSRERQPPLPHHRGVGH 123
               RG+    A+         AP  R G  R RP+    RP + R    P     G   
Sbjct: 463 DEFRRGAPAGDARPRRREAGEAAPAERRGPPRERPSDFEGRPPRERSEGRPQRDFHGDSR 522

Query: 122 TAGAVGGRASKQPHTQHPRNRQKRRAPATRARVGR-TRPAR 3
             G    R  +    + P   ++R  P  R R     RPAR
Sbjct: 523 ERGEGAPRRERPSEGRPP---ERRGPPRDRPRAAEGERPAR 560

[18][TOP]
>UniRef100_UPI00016B0CBB translation initiation factor IF-2 n=3 Tax=Burkholderia
           pseudomallei RepID=UPI00016B0CBB
          Length = 761

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 46/127 (36%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRR-PRRRKSKQQREPA 265
           A R A  +   A R +  +AR E    + R+ A    A A  E    PRR + K    P 
Sbjct: 8   AQREAAKKAEDAAREAADKARAEQEEIRKRREAAEAEARAIREMMNTPRRAQVKAVEPPK 67

Query: 264 SASTTALRQAKAEGTSN--ASGGGENAAS-PAKKEPRT--PAAAAAPQG---RRPHRRSS 109
            A   A + A+A+GT +  A   GE AA+ PA K+P +  PA AAAP G   ++P    S
Sbjct: 68  PAEPPAAKTAEAKGTLHKPAKPAGEAAAARPAAKKPASGAPAPAAAPTGDRTKKPGTGKS 127

Query: 108 GWQSEQA 88
           GWQ + A
Sbjct: 128 GWQDDAA 134

[19][TOP]
>UniRef100_UPI00016A9601 translation initiation factor IF-2 n=5 Tax=Burkholderia
           pseudomallei RepID=UPI00016A9601
          Length = 778

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 46/127 (36%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRR-PRRRKSKQQREPA 265
           A R A  +   A R +  +AR E    + R+ A    A A  E    PRR + K    P 
Sbjct: 25  AQREAAKKAEDAAREAADKARAEQEEIRKRREAAEAEARAIREMMNTPRRAQVKAVEPPK 84

Query: 264 SASTTALRQAKAEGTSN--ASGGGENAAS-PAKKEPRT--PAAAAAPQG---RRPHRRSS 109
            A   A + A+A+GT +  A   GE AA+ PA K+P +  PA AAAP G   ++P    S
Sbjct: 85  PAEPPAAKAAEAKGTLHKPAKPAGEAAAARPAAKKPASGAPAPAAAPAGDRTKKPGTGKS 144

Query: 108 GWQSEQA 88
           GWQ + A
Sbjct: 145 GWQDDAA 151

[20][TOP]
>UniRef100_UPI00016A4709 translation initiation factor IF-2 n=1 Tax=Burkholderia
           thailandensis TXDOH RepID=UPI00016A4709
          Length = 958

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 46/127 (36%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRR-PRRRKSKQQREPA 265
           A R A  +   A R +  +AR E    + R+ A    A A  E    PRR + K    P 
Sbjct: 205 AQREAAKKAEDAAREAADKARAEQEEIRKRREAAEAEARAIREMMNTPRRAQVKAVEPPK 264

Query: 264 SASTTALRQAKAEGTSN--ASGGGENAAS-PAKKEPRT--PAAAAAPQG---RRPHRRSS 109
            A   A + A+A+GT +  A   GE AA+ PA K+P +  PA AAAP G   ++P    S
Sbjct: 265 PAEQPAAKAAEAKGTLHKPAKPAGEAAAARPAAKKPASGAPAPAAAPAGDRNKKPGTGKS 324

Query: 108 GWQSEQA 88
           GWQ + A
Sbjct: 325 GWQDDAA 331

[21][TOP]
>UniRef100_A0L9M0 TPR repeat-containing protein n=1 Tax=Magnetococcus sp. MC-1
           RepID=A0L9M0_MAGSM
          Length = 1048

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRRPRRRKSKQQR-EPA 265
           A   A  +QA AE+ +  +A  E +A++   A  A A  AA E     +  ++Q   E A
Sbjct: 434 AAEQAAAEQAAAEKAAAEKAAAEKAAAEKAAAEKAAAEQAAAEQAAAEKAAAEQAAAEQA 493

Query: 264 SASTTALRQAKAEGTSNASGGGENAASP-AKKEPRTPAAAAAPQGRRPHRRSSGWQSEQA 88
           +A   A  +A AE  +      E AA+  A  E      AAA Q       +    +EQA
Sbjct: 494 AAEQAAAEKAAAEQAAAEKAAAEQAAAEQAAAEQAAAEKAAAEQAAAEQAAAEKAAAEQA 553

Query: 87  ATHTAPPQQAKAEGTSHPRARRENAAS 7
           A   A  +QA AE  +  +A  E AA+
Sbjct: 554 AAEKAAAEQAAAEKAAAEKAAAEQAAA 580

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 46/146 (31%), Positives = 63/146 (43%), Gaps = 1/146 (0%)
 Frame = -2

Query: 441  ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRRPRRRKSKQQREPAS 262
            A   A  +QA AE+ +  +A  E +A++   A  A A  AA E    +    K   E A+
Sbjct: 624  AAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEKAAAEKAAAE----KAAAEKAAAEQAA 679

Query: 261  ASTTALRQAKAEGTSNASGGGENAASP-AKKEPRTPAAAAAPQGRRPHRRSSGWQSEQAA 85
            A   A  QA AE  +      E AA+  A  E      AAA Q       +    +EQAA
Sbjct: 680  AEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEQAA 739

Query: 84   THTAPPQQAKAEGTSHPRARRENAAS 7
               A  +QA AE  +  +A  E AA+
Sbjct: 740  AEQAAAEQAAAEKAAAEKAAAEKAAA 765

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 46/147 (31%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRRPRRRKSKQQR-EPA 265
           A   A  +QA AE+ +  +A  E +A++   A  A A  AA E     +  ++Q   E A
Sbjct: 314 AAEQAAAEQAVAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEQA 373

Query: 264 SASTTALRQAKAEGTSNASGGGENAASP-AKKEPRTPAAAAAPQGRRPHRRSSGWQSEQA 88
           +A   A  QA AE  +      E AA+  A  E      AAA Q       +    +EQA
Sbjct: 374 AAEKAAAEQAAAEKAAAEQAAAEKAAAEKAAAEQAAAEKAAAEQAAAEKAAAEQAAAEQA 433

Query: 87  ATHTAPPQQAKAEGTSHPRARRENAAS 7
           A   A  +QA AE  +  +A  E AA+
Sbjct: 434 AAEQAAAEQAAAEKAAAEKAAAEKAAA 460

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 46/147 (31%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRRPRRRKSKQQR-EPA 265
           A   A  +QA AE+ +  +A  E +A++   A  A A  AA E     +  ++Q   E A
Sbjct: 509 AAEKAAAEQAAAEQAAAEQAAAEKAAAEQAAAEQAAAEKAAAEQAAAEKAAAEQAAAEKA 568

Query: 264 SASTTALRQAKAEGTSNASGGGENAASP-AKKEPRTPAAAAAPQGRRPHRRSSGWQSEQA 88
           +A   A  QA AE  +      E AA+  A  E      AAA Q       +    +EQA
Sbjct: 569 AAEKAAAEQAAAEQAAAEQVAAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEQVAAEQA 628

Query: 87  ATHTAPPQQAKAEGTSHPRARRENAAS 7
           A   A  +QA AE  +  +A  E AA+
Sbjct: 629 AAEQAAAEQAAAEQAAAEQAAAEQAAA 655

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 45/147 (30%), Positives = 64/147 (43%), Gaps = 2/147 (1%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRRPRRRKS-KQQREPA 265
           A   A  +QA AE+ +  +A  E +A++   A  A A  AA E     +  + K   E A
Sbjct: 409 AAEKAAAEQAAAEKAAAEQAAAEQAAAEQAAAEQAAAEKAAAEKAAAEKAAAEKAAAEKA 468

Query: 264 SASTTALRQAKAEGTSNASGGGENAASP-AKKEPRTPAAAAAPQGRRPHRRSSGWQSEQA 88
           +A   A  QA AE  +      E AA+  A  E      AAA +       +    +EQA
Sbjct: 469 AAEQAAAEQAAAEKAAAEQAAAEQAAAEQAAAEKAAAEQAAAEKAAAEQAAAEQAAAEQA 528

Query: 87  ATHTAPPQQAKAEGTSHPRARRENAAS 7
           A   A  +QA AE  +  +A  E AA+
Sbjct: 529 AAEKAAAEQAAAEQAAAEKAAAEQAAA 555

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRRPRRRKSKQQR-EPA 265
           A   A  ++A AE+ +  +A  E +A++   A  A A  AA E     +  ++Q   E A
Sbjct: 474 AAEQAAAEKAAAEQAAAEQAAAEQAAAEKAAAEQAAAEKAAAEQAAAEQAAAEQAAAEKA 533

Query: 264 SASTTALRQAKAEGTSNASGGGENAASP-AKKEPRTPAAAAAPQGRRPHRRSSGWQSEQA 88
           +A   A  QA AE  +      E AA+  A  E      AAA Q       +    +EQA
Sbjct: 534 AAEQAAAEQAAAEKAAAEQAAAEKAAAEQAAAEKAAAEKAAAEQAAAEQAAAEQVAAEQA 593

Query: 87  ATHTAPPQQAKAEGTSHPRARRENAAS 7
           A   A  +QA AE  +  +A  E AA+
Sbjct: 594 AAEQAAAEQAAAEQAAAEQAAAEQAAA 620

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
 Frame = -2

Query: 441  ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRRPRRRKSKQQR-EPA 265
            A   A  +QA AE+ +  +A  E +A++   A  A A  AA E     +  ++Q   E A
Sbjct: 629  AAEQAAAEQAAAEQAAAEQAAAEQAAAEKAAAEKAAAEKAAAEKAAAEQAAAEQAAAEQA 688

Query: 264  SASTTALRQAKAEGTSNASGGGENAASP-AKKEPRTPAAAAAPQGRRPHRRSSGWQSEQA 88
            +A   A  QA AE  +      E AA+  A  E      AAA Q       +    +EQA
Sbjct: 689  AAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEQA 748

Query: 87   ATHTAPPQQAKAEGTSHPRARRENAAS 7
            A   A  ++A AE  +  +A  E AA+
Sbjct: 749  AAEKAAAEKAAAEKAAAEQAAAEKAAA 775

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 45/146 (30%), Positives = 63/146 (43%), Gaps = 1/146 (0%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRRPRRRKSKQQREPAS 262
           A   A  +QA AE+ +  +A  E +A++   A  A A  AA E    +    K   E A+
Sbjct: 329 AAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAE----QAAAEKAAAEQAA 384

Query: 261 ASTTALRQAKAEGTSNASGGGENAASP-AKKEPRTPAAAAAPQGRRPHRRSSGWQSEQAA 85
           A   A  QA AE  +      E AA+  A  E      AAA Q       +    +EQAA
Sbjct: 385 AEKAAAEQAAAEKAAAEKAAAEQAAAEKAAAEQAAAEKAAAEQAAAEQAAAEQAAAEQAA 444

Query: 84  THTAPPQQAKAEGTSHPRARRENAAS 7
              A  ++A AE  +  +A  E AA+
Sbjct: 445 AEKAAAEKAAAEKAAAEKAAAEKAAA 470

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 45/147 (30%), Positives = 64/147 (43%), Gaps = 2/147 (1%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRRPRRRKSKQQR-EPA 265
           A   A  +QA AE+ +  +A  E +A++   A  A A  AA E     +  ++Q   E A
Sbjct: 484 AAEQAAAEQAAAEQAAAEKAAAEQAAAEKAAAEQAAAEQAAAEQAAAEKAAAEQAAAEQA 543

Query: 264 SASTTALRQAKAEGTSNASGGGENAASP-AKKEPRTPAAAAAPQGRRPHRRSSGWQSEQA 88
           +A   A  QA AE  +      E AA+  A  E      AAA Q       +    +EQA
Sbjct: 544 AAEKAAAEQAAAEKAAAEQAAAEKAAAEKAAAEQAAAEQAAAEQVAAEQAAAEQAAAEQA 603

Query: 87  ATHTAPPQQAKAEGTSHPRARRENAAS 7
           A   A  +QA AE  +  +   E AA+
Sbjct: 604 AAEQAAAEQAAAEQAAAEQVAAEQAAA 630

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 46/147 (31%), Positives = 64/147 (43%), Gaps = 2/147 (1%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRRPRRRKSKQQR-EPA 265
           A   A  +QA AE+ +  +A  E  A++   A  A A  AA E     +  ++Q   E A
Sbjct: 289 AAEQAAAEQAVAEKVAAEQAAAEKVAAEQAAAEQAVAEQAAAEQAAAEQAAAEQAAAEQA 348

Query: 264 SASTTALRQAKAEGTSNASGGGENAASP-AKKEPRTPAAAAAPQGRRPHRRSSGWQSEQA 88
           +A   A  QA AE  +      E AA+  A  E      AAA Q       +    +EQA
Sbjct: 349 AAEQAAAEQAAAEQAAAEQAAAEQAAAEKAAAEQAAAEKAAAEQAAAEKAAAEKAAAEQA 408

Query: 87  ATHTAPPQQAKAEGTSHPRARRENAAS 7
           A   A  +QA AE  +  +A  E AA+
Sbjct: 409 AAEKAAAEQAAAEKAAAEQAAAEQAAA 435

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRRPRRRKSKQQR-EPA 265
           A   A  +QA AE+ +  +A  E +A++   A  A A  AA E     +  ++Q   E A
Sbjct: 364 AAEQAAAEQAAAEKAAAEQAAAEKAAAEQAAAEKAAAEKAAAEQAAAEKAAAEQAAAEKA 423

Query: 264 SASTTALRQAKAEGTSNASGGGENAASPAKKEPRTPAAAAAPQGRRPHRRSSGWQSEQAA 85
           +A   A  QA AE  +      E AA+      +  A  AA +     + ++    EQAA
Sbjct: 424 AAEQAAAEQAAAEQAAAEQAAAEKAAAEKAAAEKAAAEKAAAEKAAAEQAAA----EQAA 479

Query: 84  THTAPPQQAKAEGTSHPRARRENAAS 7
              A  +QA AE  +  +A  E AA+
Sbjct: 480 AEKAAAEQAAAEQAAAEQAAAEKAAA 505

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 45/147 (30%), Positives = 63/147 (42%), Gaps = 2/147 (1%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRRPRRRKS-KQQREPA 265
           A   A  +QA AE+ +  +A  E +A++   A  A A  AA E     +  + K   E A
Sbjct: 519 AAEQAAAEQAAAEKAAAEQAAAEQAAAEKAAAEQAAAEKAAAEQAAAEKAAAEKAAAEQA 578

Query: 264 SASTTALRQAKAEGTSNASGGGENAASP-AKKEPRTPAAAAAPQGRRPHRRSSGWQSEQA 88
           +A   A  Q  AE  +      E AA+  A  E      AAA Q       +    +EQA
Sbjct: 579 AAEQAAAEQVAAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEQVAAEQAAAEQAAAEQA 638

Query: 87  ATHTAPPQQAKAEGTSHPRARRENAAS 7
           A   A  +QA AE  +  +A  E AA+
Sbjct: 639 AAEQAAAEQAAAEQAAAEKAAAEKAAA 665

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 2/147 (1%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRRPRRRKSKQ-QREPA 265
           A   A  +QA AE+ +  +A  E +A++   A  A A  AA E     +  ++Q   E A
Sbjct: 534 AAEQAAAEQAAAEKAAAEQAAAEKAAAEQAAAEKAAAEKAAAEQAAAEQAAAEQVAAEQA 593

Query: 264 SASTTALRQAKAEGTSNASGGGENAASP-AKKEPRTPAAAAAPQGRRPHRRSSGWQSEQA 88
           +A   A  QA AE  +      E AA+     E      AAA Q       +    +EQA
Sbjct: 594 AAEQAAAEQAAAEQAAAEQAAAEQAAAEQVAAEQAAAEQAAAEQAAAEQAAAEQAAAEQA 653

Query: 87  ATHTAPPQQAKAEGTSHPRARRENAAS 7
           A   A  ++A AE  +  +A  E AA+
Sbjct: 654 AAEKAAAEKAAAEKAAAEKAAAEQAAA 680

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 45/147 (30%), Positives = 64/147 (43%), Gaps = 2/147 (1%)
 Frame = -2

Query: 441  ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRRPRRRKSKQQR-EPA 265
            A   A  +Q  AE+ +  +A  E +A++   A  A A  AA E     +  ++Q   E A
Sbjct: 579  AAEQAAAEQVAAEQAAAEQAAAEQAAAEQAAAEQAAAEQAAAEQVAAEQAAAEQAAAEQA 638

Query: 264  SASTTALRQAKAEGTSNASGGGENAASP-AKKEPRTPAAAAAPQGRRPHRRSSGWQSEQA 88
            +A   A  QA AE  +      E AA+  A  E      AAA Q       +    +EQA
Sbjct: 639  AAEQAAAEQAAAEQAAAEKAAAEKAAAEKAAAEKAAAEQAAAEQAAAEQAAAEQAAAEQA 698

Query: 87   ATHTAPPQQAKAEGTSHPRARRENAAS 7
            A   A  +QA AE  +  +A  E AA+
Sbjct: 699  AAEQAAAEQAAAEQAAAEQAAAEQAAA 725

[22][TOP]
>UniRef100_B7CTX0 Translation initiation factor IF-2 n=1 Tax=Burkholderia
           pseudomallei 576 RepID=B7CTX0_BURPS
          Length = 975

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 46/127 (36%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRR-PRRRKSKQQREPA 265
           A R A  +   A R +  +AR E    + R+ A    A A  E    PRR + K    P 
Sbjct: 222 AQREAAKKAEDAAREAADKARAEQEEIRKRREAAEAEARAIREMMNTPRRAQVKAVEPPK 281

Query: 264 SASTTALRQAKAEGTSN--ASGGGENAAS-PAKKEPRT--PAAAAAPQG---RRPHRRSS 109
            A   A + A+A+GT +  A   GE AA+ PA K+P +  PA AAAP G   ++P    S
Sbjct: 282 PAEPPAAKAAEAKGTLHKPAKPAGEAAAARPAAKKPASGAPAPAAAPAGDRTKKPGTGKS 341

Query: 108 GWQSEQA 88
           GWQ + A
Sbjct: 342 GWQDDAA 348

[23][TOP]
>UniRef100_Q2SVG8 Translation initiation factor IF-2 n=1 Tax=Burkholderia
           thailandensis E264 RepID=IF2_BURTA
          Length = 976

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 46/127 (36%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRR-PRRRKSKQQREPA 265
           A R A  +   A R +  +AR E    + R+ A    A A  E    PRR + K    P 
Sbjct: 223 AQREAAKKAEDAAREAADKARAEQEEIRKRREAAEAEARAIREMMNTPRRAQVKAVEPPK 282

Query: 264 SASTTALRQAKAEGTSN--ASGGGENAAS-PAKKEPRT--PAAAAAPQG---RRPHRRSS 109
            A   A + A+A+GT +  A   GE AA+ PA K+P +  PA AAAP G   ++P    S
Sbjct: 283 PAEQPAAKAAEAKGTLHKPAKPAGEAAAARPAAKKPASGAPAPAAAPAGDRNKKPGTGKS 342

Query: 108 GWQSEQA 88
           GWQ + A
Sbjct: 343 GWQDDAA 349

[24][TOP]
>UniRef100_Q3JSY9 Translation initiation factor IF-2 n=8 Tax=Burkholderia
           pseudomallei RepID=IF2_BURP1
          Length = 975

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 46/127 (36%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRR-PRRRKSKQQREPA 265
           A R A  +   A R +  +AR E    + R+ A    A A  E    PRR + K    P 
Sbjct: 222 AQREAAKKAEDAAREAADKARAEQEEIRKRREAAEAEARAIREMMNTPRRAQVKAVEPPK 281

Query: 264 SASTTALRQAKAEGTSN--ASGGGENAAS-PAKKEPRT--PAAAAAPQG---RRPHRRSS 109
            A   A + A+A+GT +  A   GE AA+ PA K+P +  PA AAAP G   ++P    S
Sbjct: 282 PAEPPAAKAAEAKGTLHKPAKPAGEAAAARPAAKKPASGAPAPAAAPAGDRTKKPGTGKS 341

Query: 108 GWQSEQA 88
           GWQ + A
Sbjct: 342 GWQDDAA 348

[25][TOP]
>UniRef100_A3NUL0 Translation initiation factor IF-2 n=2 Tax=Burkholderia
           pseudomallei RepID=IF2_BURP0
          Length = 975

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 46/127 (36%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRR-PRRRKSKQQREPA 265
           A R A  +   A R +  +AR E    + R+ A    A A  E    PRR + K    P 
Sbjct: 222 AQREAAKKAEDAAREAADKARAEQEEIRKRREAAEAEARAIREMMNTPRRAQVKAVEPPK 281

Query: 264 SASTTALRQAKAEGTSN--ASGGGENAAS-PAKKEPRT--PAAAAAPQG---RRPHRRSS 109
            A   A + A+A+GT +  A   GE AA+ PA K+P +  PA AAAP G   ++P    S
Sbjct: 282 PAEPPAAKTAEAKGTLHKPAKPAGEAAAARPAAKKPASGAPAPAAAPAGDRTKKPGTGKS 341

Query: 108 GWQSEQA 88
           GWQ + A
Sbjct: 342 GWQDDAA 348

[26][TOP]
>UniRef100_A3MJW4 Translation initiation factor IF-2 n=8 Tax=Burkholderia mallei
           RepID=IF2_BURM7
          Length = 975

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 46/127 (36%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRR-PRRRKSKQQREPA 265
           A R A  +   A R +  +AR E    + R+ A    A A  E    PRR + K    P 
Sbjct: 222 AQREAAKKAEDAAREAADKARAEQEEIRKRREAAEAEARAIREMMNTPRRAQVKAVEPPK 281

Query: 264 SASTTALRQAKAEGTSN--ASGGGENAAS-PAKKEPRT--PAAAAAPQG---RRPHRRSS 109
            A   A + A+A+GT +  A   GE AA+ PA K+P +  PA AAAP G   ++P    S
Sbjct: 282 PAEPPAAKAAEAKGTLHKPAKPAGEAAAARPAAKKPASGAPAPAAAPAGDRTKKPGTGKS 341

Query: 108 GWQSEQA 88
           GWQ + A
Sbjct: 342 GWQDDAA 348

[27][TOP]
>UniRef100_UPI0001AEFC30 hypothetical protein SrosN15_12062 n=1 Tax=Streptomyces roseosporus
            NRRL 15998 RepID=UPI0001AEFC30
          Length = 1277

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 48/139 (34%), Positives = 53/139 (38%), Gaps = 3/139 (2%)
 Frame = -3

Query: 413  QERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAAGRASSRGSQPPQAQQLCDRQ 234
            + R  P  R   ER RP RP  RRP   P R   G  RAA      G   P         
Sbjct: 1007 RRRLGPGLRTARER-RPPRPHPRRP-DHPHRVDLGPDRAARGPGGHGPAGPPPGDRRRPA 1064

Query: 233  KRRAPVTRAGGERTRPARPKKSRERQPPLPHHRGVGHTAGAVGGRASKQPHTQHPR---N 63
            +R A   R  G R  P RP+ +R         RG G   G VGGR  + P   HP     
Sbjct: 1065 RRGARRRRRAGRRRGPPRPQAAR---------RGPGRGGGRVGGRGCRGPGGVHPGAAVR 1115

Query: 62   RQKRRAPATRARVGRTRPA 6
            R  RR P      G  RPA
Sbjct: 1116 RPVRREPPGARPAGPARPA 1134

[28][TOP]
>UniRef100_B4V3T2 Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1
           RepID=B4V3T2_9ACTO
          Length = 218

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 46/140 (32%), Positives = 63/140 (45%), Gaps = 5/140 (3%)
 Frame = -2

Query: 426 LPQQAR---AERTSHPRARRENSASQARKAAPAPAANAAPEGRRPRRRKSKQQREPASAS 256
           LP + R   A R + P      +A+ + +AAPA AA AAP    P    + + R  A+ +
Sbjct: 23  LPPRRRRRAASRPAGPPGATAAAATASDEAAPAAAAAAAPVVEEPAAAPAPRARRRATRA 82

Query: 255 TTALRQAKAEGTSNASGGGENAASPAKKEPRTPAAAAAPQGRRPHRRSSGWQSEQAA--T 82
             A   A A+    A+     AA+P  +E   PAAA AP+ RR   R+       AA   
Sbjct: 83  VAAPETAAADVVVEAAPAAAAAAAPVVEE---PAAAPAPRARRRATRAVAAPEAPAADVV 139

Query: 81  HTAPPQQAKAEGTSHPRARR 22
             AP  +  A     PRARR
Sbjct: 140 EAAPAAEEPAAAAPAPRARR 159

[29][TOP]
>UniRef100_A9BUN5 Putative uncharacterized protein n=1 Tax=Delftia acidovorans SPH-1
           RepID=A9BUN5_DELAS
          Length = 318

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRRPRRRKSKQQREPAS 262
           A   A    A A++ + P A++  +A+ A+KAA   A  AA   ++     +K+   PA 
Sbjct: 63  AAPAAKKAAAPAKKAAAPAAKK--AAAPAKKAAAPAAKKAAAPAKKAAAPAAKKAAAPAK 120

Query: 261 -ASTTALRQAKAEGTSNASGGGENAASPAKKEPRTPAAAAAPQGRR---PHRRSSGWQSE 94
            A+  A ++A A     A+   + AA+PAKK       AAAP  ++   P ++++   ++
Sbjct: 121 KAAAPAAKKAAAPAKKAAAPAAKKAAAPAKKAAAPAKKAAAPAAKKAAAPAKKAAAPAAK 180

Query: 93  QAATHTAPPQQAKAEGTSHPRARRENAASPA 1
           +AA   AP ++A A       A  + AA+PA
Sbjct: 181 KAA---APAKKAAAPAAKKAAAPAKKAAAPA 208

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAPAPAANAAPEGRRPRRRKSKQQREPAS 262
           +T+    ++  A++ + P+A      +   KAAP   A AAP  ++     +K+   PA+
Sbjct: 9   STKAPTDKKTTAKKAAAPKAETVKKTTATAKAAPVKKA-AAPAVKKAAAPAAKKAAAPAA 67

Query: 261 ASTTA-LRQAKAEGTSNASGGGENAASPAKKEPRTPA-AAAAPQGRR---PHRRSSGWQS 97
               A  ++A A     A+   + AA+PA K+   PA  AAAP  ++   P ++++   +
Sbjct: 68  KKAAAPAKKAAAPAAKKAAAPAKKAAAPAAKKAAAPAKKAAAPAAKKAAAPAKKAAAPAA 127

Query: 96  EQAATHTAPPQQAKAEGTSHPRARRENAASPA 1
           ++AA   AP ++A A       A  + AA+PA
Sbjct: 128 KKAA---APAKKAAAPAAKKAAAPAKKAAAPA 156

[30][TOP]
>UniRef100_B9AY35 Putative uncharacterized protein n=1 Tax=Burkholderia multivorans
           CGD1 RepID=B9AY35_9BURK
          Length = 432

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 39/101 (38%), Positives = 49/101 (48%)
 Frame = -2

Query: 390 PRARRENSASQARKAAPAPAANAAPEGRRPRRRKSKQQREPASASTTALRQAKAEGTSNA 211
           P A R +S S A  A+   AA+AAP   RP          PAS ++TA   + A G S A
Sbjct: 85  PAASRPHSESGASGAS---AASAAPAASRPHAASGASAAAPASTASTASGASGASGASGA 141

Query: 210 SGGGENAASPAKKEPRTPAAAAAPQGRRPHRRSSGWQSEQA 88
           SG     A+PA     TPA+ AAP   R H   S  ++E A
Sbjct: 142 SG-----ATPASAASETPASEAAPTPPRRHPPLSAHEAESA 177

[31][TOP]
>UniRef100_Q9UQ39 RNA binding protein (Fragment) n=1 Tax=Homo sapiens
           RepID=Q9UQ39_HUMAN
          Length = 956

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 47/141 (33%), Positives = 57/141 (40%), Gaps = 1/141 (0%)
 Frame = -3

Query: 422 RNRQERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAAGRASSRGSQPPQAQQLC 243
           R R    +PATR R     PAR G+ R R    R  R   R   R  SR   P +     
Sbjct: 524 RGRSHSRSPATRGRSRSRTPARRGRSRSRTPARR--RSRSRTPTRRRSRSRTPARR---- 577

Query: 242 DRQKRRAPVTRAGGERTRPARPKKSRERQPPLPHHRGVGHTAGAVGGRASKQPHTQHPRN 63
            R + R P  R    RTR    ++SR R P     R    T    G   S+ P     R 
Sbjct: 578 GRSRSRTPARRR--SRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPAR---RG 632

Query: 62  RQKRRAPATRARVGRTR-PAR 3
           R + R PA R+   R+R PAR
Sbjct: 633 RSRSRTPARRSGRSRSRTPAR 653

[32][TOP]
>UniRef100_Q9UQ35-2 Isoform 2 of Serine/arginine repetitive matrix protein 2 n=1
           Tax=Homo sapiens RepID=Q9UQ35-2
          Length = 2334

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 47/141 (33%), Positives = 57/141 (40%), Gaps = 1/141 (0%)
 Frame = -3

Query: 422 RNRQERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAAGRASSRGSQPPQAQQLC 243
           R R    +PATR R     PAR G+ R R    R  R   R   R  SR   P +     
Sbjct: 559 RGRSHSRSPATRGRSRSRTPARRGRSRSRTPARR--RSRSRTPTRRRSRSRTPARR---- 612

Query: 242 DRQKRRAPVTRAGGERTRPARPKKSRERQPPLPHHRGVGHTAGAVGGRASKQPHTQHPRN 63
            R + R P  R    RTR    ++SR R P     R    T    G   S+ P     R 
Sbjct: 613 GRSRSRTPARRR--SRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPAR---RG 667

Query: 62  RQKRRAPATRARVGRTR-PAR 3
           R + R PA R+   R+R PAR
Sbjct: 668 RSRSRTPARRSGRSRSRTPAR 688

[33][TOP]
>UniRef100_Q9UQ35 Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo sapiens
           RepID=SRRM2_HUMAN
          Length = 2752

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 47/141 (33%), Positives = 57/141 (40%), Gaps = 1/141 (0%)
 Frame = -3

Query: 422 RNRQERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAAGRASSRGSQPPQAQQLC 243
           R R    +PATR R     PAR G+ R R    R  R   R   R  SR   P +     
Sbjct: 559 RGRSHSRSPATRGRSRSRTPARRGRSRSRTPARR--RSRSRTPTRRRSRSRTPARR---- 612

Query: 242 DRQKRRAPVTRAGGERTRPARPKKSRERQPPLPHHRGVGHTAGAVGGRASKQPHTQHPRN 63
            R + R P  R    RTR    ++SR R P     R    T    G   S+ P     R 
Sbjct: 613 GRSRSRTPARRR--SRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPAR---RG 667

Query: 62  RQKRRAPATRARVGRTR-PAR 3
           R + R PA R+   R+R PAR
Sbjct: 668 RSRSRTPARRSGRSRSRTPAR 688

[34][TOP]
>UniRef100_A8IFL6 Flagellar associated protein n=1 Tax=Chlamydomonas reinhardtii
            RepID=A8IFL6_CHLRE
          Length = 2058

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 44/147 (29%), Positives = 63/147 (42%), Gaps = 3/147 (2%)
 Frame = -2

Query: 435  RTALPQQARAERTSHPRARREN---SASQARKAAPAPAANAAPEGRRPRRRKSKQQREPA 265
            + A    A A+  +   A  E+   +A++A+ AA A AA AA E      + + + +E A
Sbjct: 829  KAAAEAAAEAKAAAEAAAAAESQAAAAAEAKLAAEAKAAEAAAEAAEAEAKAAAETKEAA 888

Query: 264  SASTTALRQAKAEGTSNASGGGENAASPAKKEPRTPAAAAAPQGRRPHRRSSGWQSEQAA 85
             A+  A  +AKA   + A+     AA  A K     A AAA         S G Q   A 
Sbjct: 889  EAAAAAEAEAKAAAEAKAAAEAAAAAEEAAKAAAEAAVAAA---------SEGAQDAAAE 939

Query: 84   THTAPPQQAKAEGTSHPRARRENAASP 4
              +A P + +    S P A  E AA P
Sbjct: 940  PESAAPAEPEPIAESEPVAEPETAAEP 966

[35][TOP]
>UniRef100_UPI000184A2B2 Serine/arginine repetitive matrix protein 2 (Serine/arginine-rich
           splicing factor-related nuclear matrix protein of 300
           kDa) (Ser/Arg- related nuclear matrix protein)
           (SR-related nuclear matrix protein of 300 kDa) (Splicing
           coactivator subunit SRm300) (30 n=1 Tax=Canis lupus
           familiaris RepID=UPI000184A2B2
          Length = 2682

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 45/140 (32%), Positives = 53/140 (37%)
 Frame = -3

Query: 422 RNRQERSAPATRARGERTRPARPGKRRPRQQPMRPLRGDGRAAGRASSRGSQPPQAQQLC 243
           R R    +PATR R     PAR  + R R    R  R   R   R  SR   P +     
Sbjct: 491 RGRSHSRSPATRGRSRSRTPARRARSRSRTPARR--RSRSRTPARRRSRSRTPARR---- 544

Query: 242 DRQKRRAPVTRAGGERTRPARPKKSRERQPPLPHHRGVGHTAGAVGGRASKQPHTQHPRN 63
            R + R P  R    RTR    ++SR R P     R    T    G   S+ P     R 
Sbjct: 545 GRSRSRTPARRRS--RTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPAR---RG 599

Query: 62  RQKRRAPATRARVGRTRPAR 3
           R + R PA R R     PAR
Sbjct: 600 RSRSRTPARRGRSRSRTPAR 619

[36][TOP]
>UniRef100_UPI00018664FF hypothetical protein BRAFLDRAFT_96524 n=1 Tax=Branchiostoma
           floridae RepID=UPI00018664FF
          Length = 662

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 38/135 (28%), Positives = 52/135 (38%), Gaps = 2/135 (1%)
 Frame = -2

Query: 417 QARAERTSHPRARRENSASQARKAAPAPAANAAPEGRRPRRRKSKQQREP-ASASTTALR 241
           +A  E TS P A  E ++    +        A PEG      + K   EP A    T+  
Sbjct: 153 EAEPEGTSEPEAEPEGTSEPEAEPKGTSEPEAEPEGTSEPEAEPKGTSEPEAEPEGTSGP 212

Query: 240 QAKAEGTSNASGGGENAASPAKKEPRTPAAAAAPQG-RRPHRRSSGWQSEQAATHTAPPQ 64
           +A+ EGTS      E  + P  +   TP     P+G   P     G    +A        
Sbjct: 213 EAEPEGTSEPEAEPEGTSEPEAEPEETPEPETEPEGASEPEAEPEGESEPEAEPEGISEP 272

Query: 63  QAKAEGTSHPRARRE 19
           +A+ EGTS P A  E
Sbjct: 273 EAEPEGTSEPEAEPE 287

[37][TOP]
>UniRef100_B1LWZ7 Translation initiation factor IF-2 n=1 Tax=Methylobacterium
           radiotolerans JCM 2831 RepID=B1LWZ7_METRJ
          Length = 971

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 50/161 (31%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARREN------------SASQARKAAPAPAANAAPEGRRPR 298
           A R    +QAR ER +    RRE+            +A++A KAA A AA  AP    P 
Sbjct: 127 ARRREAEEQARREREAAEARRREDEERKAAAAAAAAAAAEAAKAAEAQAAAPAPAAAAPV 186

Query: 297 RRKSKQQREPASASTTALRQAKAEGTSNASGGGE-NAASPAKKEPRTPAAA-AAPQGRRP 124
              ++Q   PA  +  A R A A     A+   +  AA PA   P  PAAA AAP+    
Sbjct: 187 ATPARQPEAPAQPA--AARPAAAPARPAAAPARQPEAARPAAARPAAPAAAPAAPRPPLT 244

Query: 123 HRRSSGWQSEQAATHTAPPQQAKAEGTSHPRARRENAASPA 1
            R S+G   +     +  P+         P    E +A+PA
Sbjct: 245 PRPSTGEPRKTITADSRKPRDLNFMARPAPAPEPEKSATPA 285

[38][TOP]
>UniRef100_A9AMI5 Putative uncharacterized protein n=1 Tax=Burkholderia multivorans
           ATCC 17616 RepID=A9AMI5_BURM1
          Length = 414

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 34/87 (39%), Positives = 44/87 (50%)
 Frame = -2

Query: 348 AAPAPAANAAPEGRRPRRRKSKQQREPASASTTALRQAKAEGTSNASGGGENAASPAKKE 169
           A  +PAA+AAP   RP           ASA+T A   + A G S+AS    +AA+PA   
Sbjct: 75  AGSSPAASAAPAASRPHAASGASGASAASAATPASSASTASGASSAS--ATSAATPASAA 132

Query: 168 PRTPAAAAAPQGRRPHRRSSGWQSEQA 88
             TPA+ AAP   R H   S  ++E A
Sbjct: 133 SETPASEAAPTPPRRHPPLSAHEAESA 159

[39][TOP]
>UniRef100_A1VER6 Single-stranded nucleic acid binding R3H domain protein n=3
           Tax=Desulfovibrio vulgaris RepID=A1VER6_DESVV
          Length = 430

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
 Frame = -2

Query: 387 RARRENSASQARKAAPAPAANAAPEGRRPRRRKSKQQREPASASTTALRQAKAEGTSNAS 208
           R +RE ++  A KA+ A   +AAP  R+PR  + +  R+P  A       A AE  + A+
Sbjct: 98  REKRETASEDAPKASSADGDDAAPS-RQPRGERGRSDRQPREARAPKSEAAVAESDAGAA 156

Query: 207 GGGENAASPAKKEPRTPAAAAAPQGRRPHRRSSGWQSEQAATHTAPPQQAKAEGTSH--- 37
              ++ A   ++  RT        GR   R  +G ++ Q AT TA   +A+A+GT+    
Sbjct: 157 ATEQSEAMDGEQRERT-GRRRRRGGRGRGRSQNGERAAQEATGTA---EAEAQGTADAAP 212

Query: 36  --------PRARRENAASPA 1
                   PR R +N  +PA
Sbjct: 213 AQEPATPAPRGRGQNRPAPA 232

[40][TOP]
>UniRef100_UPI0000222285 Hypothetical protein CBG21601 n=1 Tax=Caenorhabditis briggsae AF16
           RepID=UPI0000222285
          Length = 719

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 49/154 (31%), Positives = 66/154 (42%), Gaps = 8/154 (5%)
 Frame = -2

Query: 441 ATRTALPQQARAERTSHPRARRENSASQARKAAP---APAANA----APEGRRPRRRKSK 283
           ATR   P+ A A R   PRA     AS  R +AP   AP A+A    AP    PR    +
Sbjct: 510 ATRAPAPR-ASATRAPAPRAPATR-ASATRASAPRALAPRASAPRAPAPRASAPRAPAPR 567

Query: 282 QQREPASASTTALRQAKAEGTSNASGGGENAASPAKKEPRTPAA-AAAPQGRRPHRRSSG 106
                ASA   +  +A A G S  S     A++P    PR  A  A+AP+   P   +  
Sbjct: 568 ASAPRASAPRASAPRALAPGASAPSASAPRASAPRASAPRASATRASAPRASAPRASAPR 627

Query: 105 WQSEQAATHTAPPQQAKAEGTSHPRARRENAASP 4
             + +A+       +A A   S PRA    A++P
Sbjct: 628 ASAPRASAPRDSAPRASAPRASAPRASAPRASAP 661

[41][TOP]
>UniRef100_Q7PRA3 AGAP002919-PB n=1 Tax=Anopheles gambiae RepID=Q7PRA3_ANOGA
          Length = 424

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 10/145 (6%)
 Frame = -2

Query: 405 ERTSHPRARRENSASQARKAAP----APAANAA----PEGRRPRRRKSKQQREPASASTT 250
           ++ S   A+++ +AS+   AAP    APA  AA      G++   +K+  ++E A+    
Sbjct: 245 DKKSLAAAKKKEAASKKEAAAPKKEAAPAKKAAVAKKDAGKKDAAKKTVAKKEDAAKKDA 304

Query: 249 ALRQAKAEGTSNASGGGENAASPAKKEPRTPAAAAAPQGRRPHRRSSGWQSEQAATHTAP 70
             ++ K +     +G  E      KKE + PAAA+AP G++    S+     +AA   AP
Sbjct: 305 GKKEVKKDAPKKDAGKKEVKKDAGKKEEKKPAAASAPAGKKAAASSA---KPEAAKKAAP 361

Query: 69  PQQAK--AEGTSHPRARRENAASPA 1
             + K  A   +  +  ++  A+PA
Sbjct: 362 KTEGKKPAAAAAEKKPAKKETAAPA 386

[42][TOP]
>UniRef100_UPI0001B51367 polyketide synthase n=1 Tax=Streptomyces lividans TK24
            RepID=UPI0001B51367
          Length = 1578

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 49/161 (30%), Positives = 63/161 (39%), Gaps = 34/161 (21%)
 Frame = -3

Query: 383  RGERTRPARPGKRRPRQQ----------PMRPLRGDGRAAGRAS------SRGSQP--PQ 258
            RG R R  RPG+R P +           P  P+ G    +GR S        G +P  P+
Sbjct: 917  RGRRRRLVRPGRRTPARPGPVAAHALRTPDLPVPGPHSRSGRRSHAVPAHGAGHRPDGPR 976

Query: 257  AQQLCDRQKRRAPVTRAGGERTRPARPKKSRER-------QPPLPHHRGV----GHTAGA 111
             + L  R + R P  R    R   ARP + R         +PP P HR +     H  G+
Sbjct: 977  GRGLPHRARHRRPRLRIPRGRPAGARPARPRAGIRLPDADRPPAPSHRPLPPTDAHAPGS 1036

Query: 110  VGGRASKQPH-----TQHPRNRQKRRAPATRARVGRTRPAR 3
             GG      H      + PR R +RR P    R  R RP R
Sbjct: 1037 AGGPHGAGHHRPARRRRRPRRRPRRRRPHRPPRPRRHRPGR 1077

[43][TOP]
>UniRef100_Q4RBG7 Chromosome undetermined SCAF21490, whole genome shotgun sequence.
           (Fragment) n=1 Tax=Tetraodon nigroviridis
           RepID=Q4RBG7_TETNG
          Length = 269

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 52/159 (32%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
 Frame = -3

Query: 416 RQERSAPATRARGERTRPA------RPGKRRPRQQPMRPLRGDGRAA-------GRASSR 276
           RQ  +  A + RG R  PA      R G++  R Q  RP  G GR A       G   SR
Sbjct: 2   RQAAAQSAPKERGNRRGPAGRDAGARAGRQEGRPQ-QRPAAGGGRGAHGSPAGGGATRSR 60

Query: 275 GSQPPQAQQLCDRQKRRAPV---TRAGGERTRPARPK---KSRERQPP--LPHHRGVG-- 126
            +   Q +Q    +  R P    + AG  R RP+RP     +R R PP   PHH   G  
Sbjct: 61  HTAARQREQATRSRDNRRPADTHSSAGTHRKRPSRPPTPPSARRRNPPSRAPHHNHPGGR 120

Query: 125 -HTAGAVGGRASKQPHTQHPRNRQKRRAPATRARVGRTR 12
                  G R + QP  + PR      AP T    G+TR
Sbjct: 121 EQNQRGAGPRTANQPPRERPRG-----APGT----GKTR 150

[44][TOP]
>UniRef100_B7L142 Pseudouridine synthase n=1 Tax=Methylobacterium chloromethanicum
           CM4 RepID=B7L142_METC4
          Length = 674

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 50/163 (30%), Positives = 64/163 (39%), Gaps = 17/163 (10%)
 Frame = -3

Query: 440 PHAQ-HSRNRQERSAPATRARGERTRPARPGKRRPRQQPMRP--LRGDGRAAGRASS--- 279
           PH +   RN +ERSAP  RAR +R R  RPG+ RPR+   R    R +G    RA     
Sbjct: 406 PHRRVRFRNEEERSAPRDRAREDRPRQDRPGQDRPREDRPRDDRPRSEGPRENRARDERP 465

Query: 278 ------RGSQPPQAQQLCDRQKRRAPVTRAGGERTRPA----RPKKSRERQPPLPHHRGV 129
                 RG+    A+         AP  R G  R RP+     P + R    P     G 
Sbjct: 466 GRDEFRRGAPAGDARPRRREAGEAAPAERRGPPRERPSDFEGSPPRERSEGRPQRDFHGD 525

Query: 128 GHTAGAVGGRASKQPHTQHPRNRQKRRAPATRARVGR-TRPAR 3
               G    R  +    + P   ++R  P  R R     RPAR
Sbjct: 526 SRERGEGAPRRERPSEGRPP---ERRGPPRDRPRAAEGERPAR 565