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[1][TOP] >UniRef100_B7PVV6 DNA-directed RNA polymerase n=1 Tax=Ixodes scapularis RepID=B7PVV6_IXOSC Length = 1394 Score = 258 bits (658), Expect = 3e-67 Identities = 124/187 (66%), Positives = 150/187 (80%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P KP RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYVNSETSGIPLNMQPKKPTRGFVQRLKGKHGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVET-DD 359 TVISPDPNLR+DQVG+P+ VA+ LTYPERVT+HN + V GPD +PGANF+E+ D Sbjct: 367 TVISPDPNLRIDQVGVPVHVAKILTYPERVTQHNLALMRTLVRNGPDVHPGANFLESRDS 426 Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 G KR+LRYGNR +A+ L G VVERHL DGDVVLFNRQPSLH++SIM+H AKV+PHRTF Sbjct: 427 GFKRYLRYGNRDLLAQQLRPGDVVERHLRDGDVVLFNRQPSLHKLSIMAHLAKVLPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [2][TOP] >UniRef100_Q86AQ5 DNA-directed RNA polymerase III subunit rpc1 n=1 Tax=Dictyostelium discoideum RepID=RPC1_DICDI Length = 1450 Score = 251 bits (640), Expect = 3e-65 Identities = 115/186 (61%), Positives = 148/186 (79%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ A ++NSD LP K +RG+SQRLKGKTGRFRGNLSGKRVDFSGR Sbjct: 300 MEDWDYLQASCAIYINSDVPGLPLQMKPTKAVRGLSQRLKGKTGRFRGNLSGKRVDFSGR 359 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNL +D+V +P +A T+TYPERVT +N +RL VI GPD +PGAN++ DG Sbjct: 360 TVISPDPNLNIDEVAVPQLIALTMTYPERVTDYNIERLQKYVINGPDRHPGANYIIYADG 419 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K++L++GNR+K A +L +G +VERH++DGD++LFNRQPSLH++SIMSH A+V+P RT R Sbjct: 420 VKKWLKFGNREKFAAELKIGDIVERHIIDGDIMLFNRQPSLHKLSIMSHKARVMPWRTLR 479 Query: 543 FNECVC 560 FNECVC Sbjct: 480 FNECVC 485 [3][TOP] >UniRef100_A7SJ34 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis RepID=A7SJ34_NEMVE Length = 1398 Score = 250 bits (639), Expect = 5e-65 Identities = 119/187 (63%), Positives = 147/187 (78%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYINSEMSGIPLNMQPKKGTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+DQV +P+ VA+ LTYPERVT+ N K + V+ G D +PGANF++ + Sbjct: 367 TVISPDPNLRIDQVAVPIHVAKVLTYPERVTQSNLKLMKQLVLNGADQHPGANFIQQRET 426 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 N KRFL+YGNRK +AK L +G VERHL+DGDVVLFNRQPSLH++SIM+H A V PHRTF Sbjct: 427 NTKRFLKYGNRKLIAKQLKIGDTVERHLIDGDVVLFNRQPSLHKLSIMAHLATVRPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [4][TOP] >UniRef100_C4R7G6 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115 RepID=C4R7G6_PICPG Length = 1460 Score = 248 bits (634), Expect = 2e-64 Identities = 120/195 (61%), Positives = 153/195 (78%), Gaps = 9/195 (4%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTA--------KPLRGISQRLKGKTGRFRGNLSG 158 ++ W++LQ+ A ++NSDA N+ L S A KP+RG QRLKGK GRFRGNLSG Sbjct: 312 IEQWDYLQLSVAMYINSDAGNMSMLPSAAGSAGSKSSKPIRGFCQRLKGKQGRFRGNLSG 371 Query: 159 KRVDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA 338 KRVDFSGRTVISPDPNLR+D+V +P RVA+ LTYPE+VT++N+ +L V+ GPD +PGA Sbjct: 372 KRVDFSGRTVISPDPNLRIDEVAVPDRVAKVLTYPEKVTRYNKHKLQQLVLNGPDVHPGA 431 Query: 339 NF-VETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSA 515 N+ ++ D+ N+R LR+GNR+K+A L +G +VERHL DGDVVLFNRQPSLHR+SI+SH A Sbjct: 432 NYLLKRDEQNRRNLRFGNRQKLANTLQIGDIVERHLEDGDVVLFNRQPSLHRLSILSHFA 491 Query: 516 KVVPHRTFRFNECVC 560 K+ P RTFR NECVC Sbjct: 492 KIRPWRTFRLNECVC 506 [5][TOP] >UniRef100_UPI00018665E5 hypothetical protein BRAFLDRAFT_127993 n=1 Tax=Branchiostoma floridae RepID=UPI00018665E5 Length = 1391 Score = 248 bits (632), Expect = 3e-64 Identities = 117/187 (62%), Positives = 149/187 (79%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ +P KP RG QRLKGK GRFRGNLSGKRVD+S R Sbjct: 307 MEDWDFLQLQCALYINSEQGGIPLNMQPKKPTRGFCQRLKGKQGRFRGNLSGKRVDYSSR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVET-DD 359 TVISPDPNLR+DQV +P+ VA+ LTYPE+V K N + + ++ G DT+PGANFVE+ Sbjct: 367 TVISPDPNLRIDQVAVPVHVAKILTYPEKVNKANIQLMRRLIVNGCDTHPGANFVESRAT 426 Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 G KRFL+YGNR+K+A++L G +VERHL+D DVVLFNRQPSLH++SIM+H AKV+PHRTF Sbjct: 427 GVKRFLKYGNRQKIAQELKYGDIVERHLMDKDVVLFNRQPSLHKLSIMAHYAKVMPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [6][TOP] >UniRef100_O94666 DNA-directed RNA polymerase III subunit rpc1 n=1 Tax=Schizosaccharomyces pombe RepID=RPC1_SCHPO Length = 1405 Score = 248 bits (632), Expect = 3e-64 Identities = 117/187 (62%), Positives = 145/187 (77%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ WE++Q+ A ++NS+ L P +KP+RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 301 MEQWEFMQLSIAMYINSEMPGLRPSDMPSKPIRGFCQRLKGKQGRFRGNLSGKRVDFSGR 360 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV-ETDD 359 TVISPDPNLR+DQV +P R+A+ LT+PERVT N+K L + GPD +PGAN+V + + Sbjct: 361 TVISPDPNLRIDQVAVPYRIAKILTFPERVTTQNKKHLQDCIRNGPDVHPGANYVIDRES 420 Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 G KRFLR+GNR ++A DL +G +VERHL D DVVLFNRQPSLH++SIM+H KV P RT Sbjct: 421 GFKRFLRFGNRNRIADDLKIGDIVERHLHDNDVVLFNRQPSLHKLSIMAHLVKVRPWRTL 480 Query: 540 RFNECVC 560 RFNECVC Sbjct: 481 RFNECVC 487 [7][TOP] >UniRef100_UPI00015B5AFA PREDICTED: hypothetical protein n=1 Tax=Nasonia vitripennis RepID=UPI00015B5AFA Length = 1372 Score = 246 bits (628), Expect = 9e-64 Identities = 118/186 (63%), Positives = 147/186 (79%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 + WE+LQ+ A ++NS+ + +PP K RG+ QRLKGK GRFRGNLSGKRVDFS RT Sbjct: 297 EDWEFLQLHVALYINSEMSGIPPSMQPQKAGRGLVQRLKGKQGRFRGNLSGKRVDFSSRT 356 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVET-DDG 362 VISPDPNLR++QVG+P+ VA+ LTYPERV K N + + V GPD +PGANF+E + Sbjct: 357 VISPDPNLRIEQVGVPIHVAKILTYPERVNKCNIELMRRLVKNGPDVHPGANFIEIGKNK 416 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 +RFLRYGNR+K+A+DL G +VERHL DGDVVLFNRQPSLH++SIM+H AKV+ +RTFR Sbjct: 417 ERRFLRYGNRQKMAQDLQYGDIVERHLHDGDVVLFNRQPSLHKLSIMAHKAKVLENRTFR 476 Query: 543 FNECVC 560 FNECVC Sbjct: 477 FNECVC 482 [8][TOP] >UniRef100_UPI000151B46E DNA-directed RNA polymerase III largest subunit n=1 Tax=Pichia guilliermondii ATCC 6260 RepID=UPI000151B46E Length = 1379 Score = 246 bits (627), Expect = 1e-63 Identities = 120/193 (62%), Positives = 154/193 (79%), Gaps = 7/193 (3%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATN---LPPL---ASTAKPLRGISQRLKGKTGRFRGNLSGKR 164 M+ W++LQ+ A ++NSDA N LP + A +AKP+RG QRLKGK GRFRGNLSGKR Sbjct: 240 MEQWDYLQLSVAMYINSDAANPALLPSMSGGAKSAKPIRGFCQRLKGKQGRFRGNLSGKR 299 Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344 VDFS RTVISPDPNLR+D+V +P RVA+ LTYPE+ T++NRK+L ++ GPD +PGAN+ Sbjct: 300 VDFSARTVISPDPNLRIDEVAVPDRVAKVLTYPEKCTRYNRKKLQQLILNGPDVHPGANY 359 Query: 345 V-ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521 V + ++ KR LR+G++ K+AK+L +G VVERH+ DGDVVLFNRQPSLHR+SI+SH AK+ Sbjct: 360 VMKQNEAAKRNLRFGDKVKLAKNLHVGDVVERHIEDGDVVLFNRQPSLHRLSILSHYAKI 419 Query: 522 VPHRTFRFNECVC 560 P RTFR NECVC Sbjct: 420 RPWRTFRLNECVC 432 [9][TOP] >UniRef100_C5MI79 DNA-directed RNA polymerase (Fragment) n=1 Tax=Candida tropicalis MYA-3404 RepID=C5MI79_CANTT Length = 1159 Score = 246 bits (627), Expect = 1e-63 Identities = 121/193 (62%), Positives = 152/193 (78%), Gaps = 7/193 (3%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPL------ASTAKPLRGISQRLKGKTGRFRGNLSGKR 164 M+ W+++Q+ A ++NSD+ N P L A +KP+R QRLKGK GRFRGNLSGKR Sbjct: 310 MEQWDYMQLSVAMYINSDSAN-PALSAGGGGAKASKPIRAFCQRLKGKQGRFRGNLSGKR 368 Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344 VDFSGRTVISPDPNL++D+V +P RVA+ LTYPE+ T++NRK+L V GPDTYPGAN+ Sbjct: 369 VDFSGRTVISPDPNLKIDEVAVPDRVAKVLTYPEKCTRYNRKKLQRLVYNGPDTYPGANY 428 Query: 345 V-ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521 V + ++ KR LR+G+R K+AK+L +G VVERH+ DGDVVLFNRQPSLHR+SI+SH AKV Sbjct: 429 VAKQNEPGKRNLRFGDRAKLAKNLQIGDVVERHIEDGDVVLFNRQPSLHRLSILSHYAKV 488 Query: 522 VPHRTFRFNECVC 560 P RTFR NECVC Sbjct: 489 RPWRTFRLNECVC 501 [10][TOP] >UniRef100_A5DM42 DNA-directed RNA polymerase n=1 Tax=Pichia guilliermondii RepID=A5DM42_PICGU Length = 1379 Score = 246 bits (627), Expect = 1e-63 Identities = 120/193 (62%), Positives = 154/193 (79%), Gaps = 7/193 (3%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATN---LPPL---ASTAKPLRGISQRLKGKTGRFRGNLSGKR 164 M+ W++LQ+ A ++NSDA N LP + A +AKP+RG QRLKGK GRFRGNLSGKR Sbjct: 240 MEQWDYLQLSVAMYINSDAANPALLPSMSGGAKSAKPIRGFCQRLKGKQGRFRGNLSGKR 299 Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344 VDFS RTVISPDPNLR+D+V +P RVA+ LTYPE+ T++NRK+L ++ GPD +PGAN+ Sbjct: 300 VDFSARTVISPDPNLRIDEVAVPDRVAKVLTYPEKCTRYNRKKLQQLILNGPDVHPGANY 359 Query: 345 V-ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521 V + ++ KR LR+G++ K+AK+L +G VVERH+ DGDVVLFNRQPSLHR+SI+SH AK+ Sbjct: 360 VMKQNEAAKRNLRFGDKVKLAKNLHVGDVVERHIEDGDVVLFNRQPSLHRLSILSHYAKI 419 Query: 522 VPHRTFRFNECVC 560 P RTFR NECVC Sbjct: 420 RPWRTFRLNECVC 432 [11][TOP] >UniRef100_UPI00016E6B7B UPI00016E6B7B related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E6B7B Length = 649 Score = 245 bits (626), Expect = 1e-63 Identities = 116/187 (62%), Positives = 149/187 (79%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LTYPERV K N + + V GP+ +PGANF++ Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPEVHPGANFIQNRFT 426 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L LG VVERHL+DGD+VLFNRQPSLH++SIM+H A+V PHRTF Sbjct: 427 QIKRFLKYGNREKIAQELRLGDVVERHLIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [12][TOP] >UniRef100_UPI00016E6B7A UPI00016E6B7A related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E6B7A Length = 1320 Score = 245 bits (626), Expect = 1e-63 Identities = 116/187 (62%), Positives = 149/187 (79%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 251 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 310 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LTYPERV K N + + V GP+ +PGANF++ Sbjct: 311 TVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPEVHPGANFIQNRFT 370 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L LG VVERHL+DGD+VLFNRQPSLH++SIM+H A+V PHRTF Sbjct: 371 QIKRFLKYGNREKIAQELRLGDVVERHLIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTF 430 Query: 540 RFNECVC 560 RFNECVC Sbjct: 431 RFNECVC 437 [13][TOP] >UniRef100_UPI00016E6B79 UPI00016E6B79 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E6B79 Length = 1390 Score = 245 bits (626), Expect = 1e-63 Identities = 116/187 (62%), Positives = 149/187 (79%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LTYPERV K N + + V GP+ +PGANF++ Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPEVHPGANFIQNRFT 426 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L LG VVERHL+DGD+VLFNRQPSLH++SIM+H A+V PHRTF Sbjct: 427 QIKRFLKYGNREKIAQELRLGDVVERHLIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [14][TOP] >UniRef100_B6K857 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K857_SCHJY Length = 1406 Score = 245 bits (626), Expect = 1e-63 Identities = 119/187 (63%), Positives = 144/187 (77%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ WE+LQ+ A ++NS+ L P +KP RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 301 MEQWEFLQLSVALYINSELPGLRPPDMPSKPTRGFCQRLKGKQGRFRGNLSGKRVDFSGR 360 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDD 359 TVISPDPNL++DQV +PLR+A+ LTYPE+VT N L V GPD +PGAN+ V+ D Sbjct: 361 TVISPDPNLQIDQVAVPLRIAKILTYPEKVTDQNIDALRTRVTNGPDVHPGANYVVDRDT 420 Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 G KRFLR+GNRK++A++L +G VERHL D DVVLFNRQPSLH++SIM+H KV P RT Sbjct: 421 GIKRFLRFGNRKRIAEELHVGDTVERHLQDNDVVLFNRQPSLHKLSIMAHLVKVRPWRTL 480 Query: 540 RFNECVC 560 RFNECVC Sbjct: 481 RFNECVC 487 [15][TOP] >UniRef100_A7TNS6 DNA-directed RNA polymerase n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TNS6_VANPO Length = 1460 Score = 245 bits (626), Expect = 1e-63 Identities = 120/193 (62%), Positives = 155/193 (80%), Gaps = 7/193 (3%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATN--LPPLAST----AKPLRGISQRLKGKTGRFRGNLSGKR 164 M+ W++LQ+ A ++NSD+ N + P AS+ AKP+RG QRLKGK GRFRGNLSGKR Sbjct: 313 MEHWDYLQLSVAMYINSDSVNPSMMPGASSGGAKAKPIRGFCQRLKGKQGRFRGNLSGKR 372 Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344 VDFSGRTVISPDPNL +D+V +P RVA+ LTYPE+VT++NR++L A VI GP+ +PGAN+ Sbjct: 373 VDFSGRTVISPDPNLSIDEVAVPDRVAKVLTYPEKVTRYNREKLQALVINGPNVHPGANY 432 Query: 345 V-ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521 + + ++ +R LRYG+R K+AK L +G +VERHL DGD+VLFNRQPSLHR+SI+SH AK+ Sbjct: 433 ILKANEEARRNLRYGDRLKIAKQLRVGDIVERHLEDGDIVLFNRQPSLHRLSILSHFAKI 492 Query: 522 VPHRTFRFNECVC 560 P RTFR NECVC Sbjct: 493 RPWRTFRLNECVC 505 [16][TOP] >UniRef100_UPI000186E437 DNA-directed RNA polymerase III largest subunit, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E437 Length = 1364 Score = 245 bits (625), Expect = 2e-63 Identities = 117/186 (62%), Positives = 145/186 (77%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 + W++LQ+ A ++NS+ T +P K RG+ QRLKGK GRFRGNLSGKRVDFS RT Sbjct: 309 EDWDFLQLHCALYINSETTGIPLSMQPKKATRGLVQRLKGKQGRFRGNLSGKRVDFSSRT 368 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365 VISPDPNL++DQVG+P VA+ LT+PE+V + N L V GPDT+PGANFVE +GN Sbjct: 369 VISPDPNLQIDQVGVPEHVAKILTFPEKVNRANIFLLRELVRNGPDTHPGANFVEDRNGN 428 Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 KR+LRYGNR K++ +L G VVERHL+D D+VLFNRQPSLH++SIM+H AKV+ HRTFR Sbjct: 429 SKRYLRYGNRSKISSELKFGDVVERHLIDDDIVLFNRQPSLHKLSIMAHRAKVLKHRTFR 488 Query: 543 FNECVC 560 FNECVC Sbjct: 489 FNECVC 494 [17][TOP] >UniRef100_B0DK21 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0DK21_LACBS Length = 1397 Score = 245 bits (625), Expect = 2e-63 Identities = 118/186 (63%), Positives = 143/186 (76%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ WE+LQ+ A ++NS+ +P KP+RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 301 MEQWEFLQLSVAMYINSELPGVPSQPGQ-KPIRGFVQRLKGKQGRFRGNLSGKRVDFSGR 359 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P RVA+ LTYPERVT HN L A+ GPD +PGANFV D Sbjct: 360 TVISPDPNLRIDEVAVPERVAKILTYPERVTTHNINALRQAIRNGPDVHPGANFVARGD- 418 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 NK+FLR+GNR +A L +G VVERH++DGD++LFNRQPSLH++SIM H AK+ P RTFR Sbjct: 419 NKKFLRFGNRAAIADGLGIGDVVERHIIDGDIILFNRQPSLHKLSIMCHRAKIRPWRTFR 478 Query: 543 FNECVC 560 NECVC Sbjct: 479 LNECVC 484 [18][TOP] >UniRef100_UPI0000DA3EBF PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide A, 155kDa n=1 Tax=Rattus norvegicus RepID=UPI0000DA3EBF Length = 1390 Score = 243 bits (620), Expect = 7e-63 Identities = 116/187 (62%), Positives = 147/187 (78%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GPD +PGANF++ Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPDVHPGANFIQQRHM 426 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H AKV PHRTF Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLAKVKPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [19][TOP] >UniRef100_UPI0000DA3DE9 PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide A, 155kDa n=2 Tax=Rattus norvegicus RepID=UPI0000DA3DE9 Length = 1362 Score = 243 bits (620), Expect = 7e-63 Identities = 116/187 (62%), Positives = 147/187 (78%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GPD +PGANF++ Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPDVHPGANFIQQRHM 426 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H AKV PHRTF Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLAKVKPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [20][TOP] >UniRef100_UPI00017B08B5 UPI00017B08B5 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B08B5 Length = 1391 Score = 243 bits (620), Expect = 7e-63 Identities = 113/187 (60%), Positives = 148/187 (79%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 309 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 368 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LTYPERV K N + + V GP+ +PGANF++ Sbjct: 369 TVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPEVHPGANFIQNRYN 428 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L G +VERH++DGD+VLFNRQPSLH++SIM+H A+V PHRTF Sbjct: 429 QIKRFLKYGNREKIAQELRYGDIVERHMIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTF 488 Query: 540 RFNECVC 560 RFNECVC Sbjct: 489 RFNECVC 495 [21][TOP] >UniRef100_Q4S3H6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4S3H6_TETNG Length = 1319 Score = 243 bits (620), Expect = 7e-63 Identities = 113/187 (60%), Positives = 148/187 (79%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 251 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 310 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LTYPERV K N + + V GP+ +PGANF++ Sbjct: 311 TVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPEVHPGANFIQNRYN 370 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L G +VERH++DGD+VLFNRQPSLH++SIM+H A+V PHRTF Sbjct: 371 QIKRFLKYGNREKIAQELRYGDIVERHMIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTF 430 Query: 540 RFNECVC 560 RFNECVC Sbjct: 431 RFNECVC 437 [22][TOP] >UniRef100_UPI000194C79C PREDICTED: polymerase (RNA) III (DNA directed) polypeptide A, 155kDa n=1 Tax=Taeniopygia guttata RepID=UPI000194C79C Length = 1390 Score = 242 bits (618), Expect = 1e-62 Identities = 113/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N + V GPD +PGANF++ Sbjct: 367 TVISPDPNLRIDEVAVPIHVAKILTFPEKVNKANINFMRKLVCNGPDVHPGANFIQQRHT 426 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L G +VERHL+DGD+VLFNRQPSLH++SIM+H A+V PHRTF Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [23][TOP] >UniRef100_A4IHM8 DNA-directed RNA polymerase n=1 Tax=Xenopus (Silurana) tropicalis RepID=A4IHM8_XENTR Length = 1390 Score = 242 bits (617), Expect = 2e-62 Identities = 112/187 (59%), Positives = 148/187 (79%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 306 MEDWDFLQLQCALYINSELSGIPMNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 365 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LT+PE+V + N + + V GPD +PGANF++ Sbjct: 366 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNQANMQLMRKLVQNGPDVHPGANFIQQRHT 425 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L G +VERHL+DGD+VLFNRQPSLH++SIM+H A+V PHRTF Sbjct: 426 QMKRFLKYGNREKIAQELRFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTF 485 Query: 540 RFNECVC 560 RFNECVC Sbjct: 486 RFNECVC 492 [24][TOP] >UniRef100_Q7TSI4 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=Q7TSI4_MOUSE Length = 649 Score = 242 bits (617), Expect = 2e-62 Identities = 115/187 (61%), Positives = 147/187 (78%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GPD +PGANF++ Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPDVHPGANFIQQRHM 426 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHRTF Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [25][TOP] >UniRef100_B2RXC6 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=B2RXC6_MOUSE Length = 1390 Score = 242 bits (617), Expect = 2e-62 Identities = 115/187 (61%), Positives = 147/187 (78%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GPD +PGANF++ Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPDVHPGANFIQQRHM 426 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHRTF Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [26][TOP] >UniRef100_UPI00004BFD05 PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide A, 155kDa n=1 Tax=Canis lupus familiaris RepID=UPI00004BFD05 Length = 1390 Score = 241 bits (616), Expect = 2e-62 Identities = 115/187 (61%), Positives = 147/187 (78%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GP+ +PGANF++ Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPEVHPGANFIQQRHT 426 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H AKV PHRTF Sbjct: 427 QMKRFLKYGNREKMAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLAKVKPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [27][TOP] >UniRef100_UPI0000EB3E23 DNA-directed RNA polymerase III subunit RPC1 (EC 2.7.7.6) (RNA polymerase III subunit C1) (DNA-directed RNA polymerase III subunit A) (DNA-directed RNA polymerase III largest subunit) (RPC155) (C160). n=1 Tax=Canis lupus familiaris RepID=UPI0000EB3E23 Length = 1393 Score = 241 bits (616), Expect = 2e-62 Identities = 115/187 (61%), Positives = 147/187 (78%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GP+ +PGANF++ Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPEVHPGANFIQQRHT 426 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H AKV PHRTF Sbjct: 427 QMKRFLKYGNREKMAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLAKVKPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [28][TOP] >UniRef100_UPI00003AE23E polymerase (RNA) III (DNA directed) polypeptide A, 155kDa n=1 Tax=Gallus gallus RepID=UPI00003AE23E Length = 1390 Score = 241 bits (616), Expect = 2e-62 Identities = 113/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N + V GPD +PGANF++ Sbjct: 367 TVISPDPNLRIDEVAVPIHVAKILTFPEKVNKANINFMRKLVRNGPDVHPGANFIQQRHT 426 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L G +VERHL+DGD+VLFNRQPSLH++SIM+H A+V PHRTF Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [29][TOP] >UniRef100_A8PJK8 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8PJK8_BRUMA Length = 1404 Score = 241 bits (616), Expect = 2e-62 Identities = 117/184 (63%), Positives = 142/184 (77%), Gaps = 1/184 (0%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 W+ LQV+ A ++NS+ + LPP + RG +QRLKGK GRFRGNLSGKRVDFSGRTVI Sbjct: 307 WDHLQVQCALYINSELSGLPPDMQPKRTTRGFTQRLKGKQGRFRGNLSGKRVDFSGRTVI 366 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGAN-FVETDDGNK 368 SPDPNLR+DQVG+P+ VA+ LT+PE V K N +R+ ++ G D +PGAN VE GNK Sbjct: 367 SPDPNLRIDQVGVPVYVAKILTFPEIVNKANIERMRKLILNGDDIHPGANHIVERATGNK 426 Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 RFL+YGNR+ A L +G ++ERHL D DVVLFNRQPSLH+ISIMSH AK+VP RTFRFN Sbjct: 427 RFLKYGNREITAAQLKVGDIIERHLDDNDVVLFNRQPSLHKISIMSHRAKIVPGRTFRFN 486 Query: 549 ECVC 560 EC C Sbjct: 487 ECAC 490 [30][TOP] >UniRef100_Q5A164 DNA-directed RNA polymerase n=1 Tax=Candida albicans RepID=Q5A164_CANAL Length = 1448 Score = 241 bits (616), Expect = 2e-62 Identities = 118/193 (61%), Positives = 152/193 (78%), Gaps = 7/193 (3%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPL------ASTAKPLRGISQRLKGKTGRFRGNLSGKR 164 M+ W++LQ+ A ++NSD+ N P L A ++KP+R QRLKGK GRFRGNLSGKR Sbjct: 310 MEQWDYLQLSVAMYINSDSAN-PALSTGGGGAKSSKPIRAFCQRLKGKQGRFRGNLSGKR 368 Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344 VDFSGRTVISPDPNL++D+V +P RVA+ LTYPE+ T++N+K+L V+ GPD +PGAN+ Sbjct: 369 VDFSGRTVISPDPNLKIDEVAVPDRVAKVLTYPEKCTRYNKKKLQKLVVNGPDIHPGANY 428 Query: 345 V-ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521 V + ++ KR LR+G+R K+AK L +G VVERH+ DGDVVLFNRQPSLHR+SI+SH AK+ Sbjct: 429 VMKQNEPGKRNLRFGDRVKLAKTLQIGDVVERHIEDGDVVLFNRQPSLHRLSILSHYAKI 488 Query: 522 VPHRTFRFNECVC 560 P RTFR NECVC Sbjct: 489 RPWRTFRLNECVC 501 [31][TOP] >UniRef100_Q5A0Z3 DNA-directed RNA polymerase n=1 Tax=Candida albicans RepID=Q5A0Z3_CANAL Length = 1448 Score = 241 bits (616), Expect = 2e-62 Identities = 118/193 (61%), Positives = 152/193 (78%), Gaps = 7/193 (3%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPL------ASTAKPLRGISQRLKGKTGRFRGNLSGKR 164 M+ W++LQ+ A ++NSD+ N P L A ++KP+R QRLKGK GRFRGNLSGKR Sbjct: 310 MEQWDYLQLSVAMYINSDSAN-PALSTGGGGAKSSKPIRAFCQRLKGKQGRFRGNLSGKR 368 Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344 VDFSGRTVISPDPNL++D+V +P RVA+ LTYPE+ T++N+K+L V+ GPD +PGAN+ Sbjct: 369 VDFSGRTVISPDPNLKIDEVAVPDRVAKVLTYPEKCTRYNKKKLQKLVVNGPDIHPGANY 428 Query: 345 V-ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521 V + ++ KR LR+G+R K+AK L +G VVERH+ DGDVVLFNRQPSLHR+SI+SH AK+ Sbjct: 429 VMKQNEPGKRNLRFGDRVKLAKTLQIGDVVERHIEDGDVVLFNRQPSLHRLSILSHYAKI 488 Query: 522 VPHRTFRFNECVC 560 P RTFR NECVC Sbjct: 489 RPWRTFRLNECVC 501 [32][TOP] >UniRef100_C4YGE6 DNA-directed RNA polymerase n=1 Tax=Candida albicans RepID=C4YGE6_CANAL Length = 1448 Score = 241 bits (616), Expect = 2e-62 Identities = 118/193 (61%), Positives = 152/193 (78%), Gaps = 7/193 (3%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPL------ASTAKPLRGISQRLKGKTGRFRGNLSGKR 164 M+ W++LQ+ A ++NSD+ N P L A ++KP+R QRLKGK GRFRGNLSGKR Sbjct: 310 MEQWDYLQLSVAMYINSDSAN-PALSTGGGGAKSSKPIRAFCQRLKGKQGRFRGNLSGKR 368 Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344 VDFSGRTVISPDPNL++D+V +P RVA+ LTYPE+ T++N+K+L V+ GPD +PGAN+ Sbjct: 369 VDFSGRTVISPDPNLKIDEVAVPDRVAKVLTYPEKCTRYNKKKLQKLVVNGPDIHPGANY 428 Query: 345 V-ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521 V + ++ KR LR+G+R K+AK L +G VVERH+ DGDVVLFNRQPSLHR+SI+SH AK+ Sbjct: 429 VMKQNEPGKRNLRFGDRVKLAKTLQIGDVVERHIEDGDVVLFNRQPSLHRLSILSHYAKI 488 Query: 522 VPHRTFRFNECVC 560 P RTFR NECVC Sbjct: 489 RPWRTFRLNECVC 501 [33][TOP] >UniRef100_A3GEY3 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis RepID=A3GEY3_PICST Length = 1448 Score = 241 bits (616), Expect = 2e-62 Identities = 118/194 (60%), Positives = 152/194 (78%), Gaps = 8/194 (4%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLAST-------AKPLRGISQRLKGKTGRFRGNLSGK 161 M+ W++LQ+ A ++NSD+ N L S+ +KP+RG QRLKGK GRFRGNLSGK Sbjct: 310 MEQWDYLQLSVAMYINSDSANPALLPSSGGGGSKSSKPIRGFCQRLKGKQGRFRGNLSGK 369 Query: 162 RVDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGAN 341 RVDFSGRTVISPDPNL++D+V +P VA+ LTYPER T++NRK+L V+ GPD +PGAN Sbjct: 370 RVDFSGRTVISPDPNLKIDEVAVPELVAKVLTYPERCTRYNRKKLQRLVVNGPDIHPGAN 429 Query: 342 FV-ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518 +V + ++ KR LR+G+R K+AK+L +G +VERH+ DGDVVLFNRQPSLHR+SI+SH AK Sbjct: 430 YVMKQNEQAKRNLRFGDRVKLAKNLQIGDLVERHIEDGDVVLFNRQPSLHRLSILSHYAK 489 Query: 519 VVPHRTFRFNECVC 560 + P RTFR NECVC Sbjct: 490 IRPWRTFRLNECVC 503 [34][TOP] >UniRef100_Q5ZL98 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Gallus gallus RepID=RPC1_CHICK Length = 1390 Score = 241 bits (616), Expect = 2e-62 Identities = 113/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N + V GPD +PGANF++ Sbjct: 367 TVISPDPNLRIDEVAVPIHVAKILTFPEKVNKANINFMRKLVRNGPDVHPGANFIQQRHT 426 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L G +VERHL+DGD+VLFNRQPSLH++SIM+H A+V PHRTF Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [35][TOP] >UniRef100_UPI00015A5DDB PREDICTED: im:7139382 n=1 Tax=Danio rerio RepID=UPI00015A5DDB Length = 1390 Score = 241 bits (615), Expect = 3e-62 Identities = 113/187 (60%), Positives = 148/187 (79%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LTYPE+V K N + + V GP+ +PGANF++ Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANIELMRKLVRNGPEVHPGANFIQQRHM 426 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L G VVERH++DGD+VLFNRQPSLH++SIM+H A+V PHRTF Sbjct: 427 QMKRFLKYGNREKMAQELKFGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [36][TOP] >UniRef100_UPI0000E22532 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide A, 155kDa n=1 Tax=Pan troglodytes RepID=UPI0000E22532 Length = 1349 Score = 241 bits (615), Expect = 3e-62 Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 266 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 325 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GP+ +PGANF++ Sbjct: 326 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVQNGPEVHPGANFIQQRHT 385 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHRTF Sbjct: 386 QMKRFLKYGNREKIAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTF 445 Query: 540 RFNECVC 560 RFNECVC Sbjct: 446 RFNECVC 452 [37][TOP] >UniRef100_UPI000155D900 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide A, 155kDa n=1 Tax=Equus caballus RepID=UPI000155D900 Length = 1390 Score = 241 bits (614), Expect = 4e-62 Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GP+ +PGANF++ Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVQNGPEVHPGANFIQQRHT 426 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHRTF Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [38][TOP] >UniRef100_B9WF61 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36 RepID=B9WF61_CANDC Length = 1448 Score = 241 bits (614), Expect = 4e-62 Identities = 116/193 (60%), Positives = 152/193 (78%), Gaps = 7/193 (3%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPL------ASTAKPLRGISQRLKGKTGRFRGNLSGKR 164 M+ W++LQ+ A ++NSD+ N P L A ++KP+R QRLKGK GRFRGNLSGKR Sbjct: 310 MEQWDYLQLSVAMYINSDSAN-PALSTGGGGAKSSKPIRAFCQRLKGKQGRFRGNLSGKR 368 Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344 VDFSGRTVISPDPNL++D+V +P RVA+ LTYPE+ T++N+K+L ++ GPD +PGAN+ Sbjct: 369 VDFSGRTVISPDPNLKIDEVAVPDRVAKVLTYPEKCTRYNKKKLQKLIVNGPDIHPGANY 428 Query: 345 V-ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521 V + ++ KR LR+G+R K+AK L +G +VERH+ DGDVVLFNRQPSLHR+SI+SH AK+ Sbjct: 429 VMKQNEPGKRNLRFGDRVKLAKTLQIGDIVERHIEDGDVVLFNRQPSLHRLSILSHYAKI 488 Query: 522 VPHRTFRFNECVC 560 P RTFR NECVC Sbjct: 489 RPWRTFRLNECVC 501 [39][TOP] >UniRef100_A8PGH2 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8PGH2_COPC7 Length = 1403 Score = 241 bits (614), Expect = 4e-62 Identities = 114/186 (61%), Positives = 145/186 (77%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ WE+LQ+ A ++NS+ +P KP+RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 301 MEQWEFLQLSVAMYINSELPGVPSQMGQ-KPIRGFVQRLKGKQGRFRGNLSGKRVDFSGR 359 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P RVA+ LTYPERVT HN + L A+ GPD +PGAN+V + Sbjct: 360 TVISPDPNLRIDEVAVPERVAKILTYPERVTMHNIETLRQAIRNGPDVHPGANYVARGE- 418 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K+FL++GNR+ +A +L +G +VERH++DGD+VLFNRQPSLH++SIM H AK+ P RTFR Sbjct: 419 TKKFLKFGNRQAIADNLAIGDIVERHVIDGDIVLFNRQPSLHKLSIMCHRAKIRPWRTFR 478 Query: 543 FNECVC 560 NECVC Sbjct: 479 LNECVC 484 [40][TOP] >UniRef100_A4IF62 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Bos taurus RepID=RPC1_BOVIN Length = 1390 Score = 241 bits (614), Expect = 4e-62 Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GP+ +PGANF++ Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPEVHPGANFIQQRHT 426 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHRTF Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [41][TOP] >UniRef100_UPI00017EFF90 PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide A, 155kDa n=1 Tax=Sus scrofa RepID=UPI00017EFF90 Length = 1390 Score = 240 bits (613), Expect = 5e-62 Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GP+ +PGANF++ Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANITFLRKLVRNGPEVHPGANFIQQRHT 426 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHRTF Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [42][TOP] >UniRef100_B7Z6H4 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B7Z6H4_HUMAN Length = 1369 Score = 240 bits (613), Expect = 5e-62 Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GP+ +PGANF++ Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVQNGPEVHPGANFIQQRHT 426 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHRTF Sbjct: 427 QMKRFLKYGNREKMAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [43][TOP] >UniRef100_C5DY31 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732 RepID=C5DY31_ZYGRC Length = 1458 Score = 240 bits (613), Expect = 5e-62 Identities = 118/191 (61%), Positives = 150/191 (78%), Gaps = 5/191 (2%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLAS----TAKPLRGISQRLKGKTGRFRGNLSGKRVD 170 M+ W++LQ+ A ++NSD+ N L+ KP+RG QRLKGK GRFRGNLSGKRVD Sbjct: 313 MEHWDYLQLAVAMYINSDSVNPAILSGGTGGKVKPIRGFCQRLKGKQGRFRGNLSGKRVD 372 Query: 171 FSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-V 347 FSGRTVISPDPNL VD+V +P RVA+ LTYPERVT++N+ +L V+ GP+ YPGAN+ + Sbjct: 373 FSGRTVISPDPNLSVDEVAVPDRVAKVLTYPERVTRYNKGKLQQLVVNGPNEYPGANYLL 432 Query: 348 ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVP 527 + D+ +R LR+G+R K+AK+L +G +VERHL DGDVVLFNRQPSLHR+SI+SH AK+ P Sbjct: 433 KKDEDARRNLRFGDRVKLAKNLRIGDLVERHLEDGDVVLFNRQPSLHRLSILSHYAKIRP 492 Query: 528 HRTFRFNECVC 560 RTFR NECVC Sbjct: 493 WRTFRLNECVC 503 [44][TOP] >UniRef100_O14802 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Homo sapiens RepID=RPC1_HUMAN Length = 1390 Score = 240 bits (613), Expect = 5e-62 Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GP+ +PGANF++ Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVQNGPEVHPGANFIQQRHT 426 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHRTF Sbjct: 427 QMKRFLKYGNREKMAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [45][TOP] >UniRef100_Q6BI69 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Debaryomyces hansenii RepID=RPC1_DEBHA Length = 1457 Score = 240 bits (613), Expect = 5e-62 Identities = 115/193 (59%), Positives = 153/193 (79%), Gaps = 7/193 (3%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLAST------AKPLRGISQRLKGKTGRFRGNLSGKR 164 M+ W++LQ+ A ++NSD+ N L S+ +KP+RG QRLKGK GRFRGNLSGKR Sbjct: 310 MEQWDYLQLSVAMYINSDSANPALLPSSGGGSKSSKPIRGFCQRLKGKQGRFRGNLSGKR 369 Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344 VDFSGRTVISPDPNL++D+V +P RVA+ LTYPE+ T++NRK+L ++ GP+ +PGAN+ Sbjct: 370 VDFSGRTVISPDPNLKIDEVAVPDRVAKVLTYPEKCTRYNRKKLQKLILSGPNVHPGANY 429 Query: 345 -VETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521 ++ ++ KR LR+G+R K+AK+L +G VVERH+ DGD+VLFNRQPSLHR+SI+SH AK+ Sbjct: 430 LLKQNESAKRNLRFGDRVKLAKNLHIGDVVERHIEDGDIVLFNRQPSLHRLSILSHYAKI 489 Query: 522 VPHRTFRFNECVC 560 P RTFR NECVC Sbjct: 490 RPWRTFRLNECVC 502 [46][TOP] >UniRef100_C7GMM0 Rpo31p n=1 Tax=Saccharomyces cerevisiae JAY291 RepID=C7GMM0_YEAS2 Length = 1460 Score = 240 bits (612), Expect = 6e-62 Identities = 116/193 (60%), Positives = 151/193 (78%), Gaps = 7/193 (3%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTA------KPLRGISQRLKGKTGRFRGNLSGKR 164 M+ W++LQ+ A ++NSD+ N L ++ KP+RG QRLKGK GRFRGNLSGKR Sbjct: 313 MEHWDYLQLTVAMYINSDSVNPAMLPGSSNGGGKVKPIRGFCQRLKGKQGRFRGNLSGKR 372 Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344 VDFSGRTVISPDPNL +D+V +P RVA+ LTYPE+VT++NR +L ++ GP+ +PGAN+ Sbjct: 373 VDFSGRTVISPDPNLSIDEVAVPDRVAKVLTYPEKVTRYNRHKLQELIVNGPNVHPGANY 432 Query: 345 -VETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521 ++ ++ +R LRYG+R K+AK+L +G VVERHL DGDVVLFNRQPSLHR+SI+SH AK+ Sbjct: 433 LLKRNEDARRNLRYGDRMKLAKNLQIGDVVERHLEDGDVVLFNRQPSLHRLSILSHYAKI 492 Query: 522 VPHRTFRFNECVC 560 P RTFR NECVC Sbjct: 493 RPWRTFRLNECVC 505 [47][TOP] >UniRef100_B3LJF9 DNA-directed RNA polymerase n=3 Tax=Saccharomyces cerevisiae RepID=B3LJF9_YEAS1 Length = 1460 Score = 240 bits (612), Expect = 6e-62 Identities = 116/193 (60%), Positives = 151/193 (78%), Gaps = 7/193 (3%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTA------KPLRGISQRLKGKTGRFRGNLSGKR 164 M+ W++LQ+ A ++NSD+ N L ++ KP+RG QRLKGK GRFRGNLSGKR Sbjct: 313 MEHWDYLQLTVAMYINSDSVNPAMLPGSSNGGGKVKPIRGFCQRLKGKQGRFRGNLSGKR 372 Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344 VDFSGRTVISPDPNL +D+V +P RVA+ LTYPE+VT++NR +L ++ GP+ +PGAN+ Sbjct: 373 VDFSGRTVISPDPNLSIDEVAVPDRVAKVLTYPEKVTRYNRHKLQELIVNGPNVHPGANY 432 Query: 345 -VETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521 ++ ++ +R LRYG+R K+AK+L +G VVERHL DGDVVLFNRQPSLHR+SI+SH AK+ Sbjct: 433 LLKRNEDARRNLRYGDRMKLAKNLQIGDVVERHLEDGDVVLFNRQPSLHRLSILSHYAKI 492 Query: 522 VPHRTFRFNECVC 560 P RTFR NECVC Sbjct: 493 RPWRTFRLNECVC 505 [48][TOP] >UniRef100_P04051 DNA-directed RNA polymerase III subunit RPC1 n=2 Tax=Saccharomyces cerevisiae RepID=RPC1_YEAST Length = 1460 Score = 240 bits (612), Expect = 6e-62 Identities = 116/193 (60%), Positives = 151/193 (78%), Gaps = 7/193 (3%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTA------KPLRGISQRLKGKTGRFRGNLSGKR 164 M+ W++LQ+ A ++NSD+ N L ++ KP+RG QRLKGK GRFRGNLSGKR Sbjct: 313 MEHWDYLQLTVAMYINSDSVNPAMLPGSSNGGGKVKPIRGFCQRLKGKQGRFRGNLSGKR 372 Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344 VDFSGRTVISPDPNL +D+V +P RVA+ LTYPE+VT++NR +L ++ GP+ +PGAN+ Sbjct: 373 VDFSGRTVISPDPNLSIDEVAVPDRVAKVLTYPEKVTRYNRHKLQELIVNGPNVHPGANY 432 Query: 345 -VETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521 ++ ++ +R LRYG+R K+AK+L +G VVERHL DGDVVLFNRQPSLHR+SI+SH AK+ Sbjct: 433 LLKRNEDARRNLRYGDRMKLAKNLQIGDVVERHLEDGDVVLFNRQPSLHRLSILSHYAKI 492 Query: 522 VPHRTFRFNECVC 560 P RTFR NECVC Sbjct: 493 RPWRTFRLNECVC 505 [49][TOP] >UniRef100_UPI0000F2AF25 PREDICTED: similar to Proteasome (prosome, macropain) subunit, alpha type, 2 n=1 Tax=Monodelphis domestica RepID=UPI0000F2AF25 Length = 1390 Score = 239 bits (611), Expect = 8e-62 Identities = 113/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N + V GP+ +PGANF++ Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFMRKLVRNGPEVHPGANFIQQRHM 426 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHRTF Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [50][TOP] >UniRef100_UPI0000612BF9 UPI0000612BF9 related cluster n=1 Tax=Bos taurus RepID=UPI0000612BF9 Length = 1392 Score = 239 bits (611), Expect = 8e-62 Identities = 114/189 (60%), Positives = 147/189 (77%), Gaps = 3/189 (1%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVE---T 353 TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GP+ +PGANF++ T Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPEVHPGANFIQQRHT 426 Query: 354 DDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHR 533 RFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHR Sbjct: 427 QMKRLRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHR 486 Query: 534 TFRFNECVC 560 TFRFNECVC Sbjct: 487 TFRFNECVC 495 [51][TOP] >UniRef100_UPI0001554E8D PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide A, 155kDa n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001554E8D Length = 1382 Score = 239 bits (610), Expect = 1e-61 Identities = 113/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 299 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 358 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N + V GP+ +PGANF++ Sbjct: 359 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANISFMRKLVRNGPEVHPGANFIQQRHM 418 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHRTF Sbjct: 419 QMKRFLKYGNREKMAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTF 478 Query: 540 RFNECVC 560 RFNECVC Sbjct: 479 RFNECVC 485 [52][TOP] >UniRef100_UPI00003BE6A5 hypothetical protein DEHA0G13849g n=1 Tax=Debaryomyces hansenii CBS767 RepID=UPI00003BE6A5 Length = 1457 Score = 239 bits (609), Expect = 1e-61 Identities = 115/193 (59%), Positives = 153/193 (79%), Gaps = 7/193 (3%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLAST------AKPLRGISQRLKGKTGRFRGNLSGKR 164 M+ W++LQ+ A ++NSD+ N L S+ +KP+RG QRLKGK GRFRGNLSGKR Sbjct: 310 MEQWDYLQLSVAMYINSDSANPALLPSSGGGSKSSKPIRGFCQRLKGKQGRFRGNLSGKR 369 Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344 VDFSGRTVISPDPNL++D+V +P RVA+ LTYPE+ T++NRK+L ++ GP+ +PGAN+ Sbjct: 370 VDFSGRTVISPDPNLKIDEVAVPDRVAKVLTYPEKCTRYNRKKLQKLILSGPNVHPGANY 429 Query: 345 -VETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521 ++ ++ KR LR+G+R K+AK+L +G VVERH+ DGD+VLFNRQPSLHR+SI+SH AK+ Sbjct: 430 LLKQNELAKRNLRFGDRVKLAKNLHIGDVVERHIEDGDIVLFNRQPSLHRLSILSHYAKI 489 Query: 522 VPHRTFRFNECVC 560 P RTFR NECVC Sbjct: 490 RPWRTFRLNECVC 502 [53][TOP] >UniRef100_C5DJG5 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DJG5_LACTC Length = 1460 Score = 239 bits (609), Expect = 1e-61 Identities = 118/192 (61%), Positives = 151/192 (78%), Gaps = 6/192 (3%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATN--LPPLASTA---KPLRGISQRLKGKTGRFRGNLSGKRV 167 M+ W++LQ+ A ++NSD+ N + P ST KP+RG QRLKGK GRFRGNLSGKRV Sbjct: 313 MEQWDYLQLAVAMYINSDSVNPAMMPGGSTGGKTKPIRGFCQRLKGKQGRFRGNLSGKRV 372 Query: 168 DFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF- 344 DFSGRTV+SPDPNL +D+V +P RVA+ LTYPE VT++N+++L VI GP+ +PGAN+ Sbjct: 373 DFSGRTVVSPDPNLSIDEVAVPDRVAKVLTYPEMVTRYNKQKLQQLVINGPNEHPGANYL 432 Query: 345 VETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVV 524 ++ D+ +R LRYG+R K+A++L G VVERHL DGDVVLFNRQPSLHR+SI+SH AK+ Sbjct: 433 LKKDEEARRNLRYGDRMKLARNLQYGDVVERHLEDGDVVLFNRQPSLHRLSILSHYAKIR 492 Query: 525 PHRTFRFNECVC 560 P RTFR NECVC Sbjct: 493 PWRTFRLNECVC 504 [54][TOP] >UniRef100_C1MN08 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MN08_9CHLO Length = 1591 Score = 238 bits (608), Expect = 2e-61 Identities = 112/188 (59%), Positives = 144/188 (76%), Gaps = 1/188 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLP-PLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSG 179 M+ W++LQV+ A + NS+ L KPLRG QRLKGK GRFRGNLSGKRVDFSG Sbjct: 322 MENWDFLQVQIAMYFNSELPGLSLQYQGPGKPLRGFVQRLKGKQGRFRGNLSGKRVDFSG 381 Query: 180 RTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDD 359 RTVISPDPNLR+D+VG+P+ +A+ +TYPE ++KHN + + V G + +PGANFV Sbjct: 382 RTVISPDPNLRIDEVGVPMHIAKLMTYPEVISKHNIEHIRERVRNGMNKHPGANFVRFKS 441 Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 G ++L+YG+R++VA +L G VVERHL DGDV+LFNRQPSLH++SIM+H AK++P RT Sbjct: 442 GGTQYLKYGDRRRVASELKFGDVVERHLNDGDVLLFNRQPSLHKMSIMAHRAKIMPWRTL 501 Query: 540 RFNECVCA 563 RFNECVCA Sbjct: 502 RFNECVCA 509 [55][TOP] >UniRef100_Q6CMC7 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis RepID=Q6CMC7_KLULA Length = 1457 Score = 238 bits (607), Expect = 2e-61 Identities = 118/191 (61%), Positives = 150/191 (78%), Gaps = 5/191 (2%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATN---LPPLAST-AKPLRGISQRLKGKTGRFRGNLSGKRVD 170 M+ W++LQ+ A ++NSD+ N LP + T +KP+RG QRLKGK GRFRGNLSGKRVD Sbjct: 313 MEQWDYLQLAVAMYINSDSVNPSMLPGSSGTKSKPIRGFCQRLKGKQGRFRGNLSGKRVD 372 Query: 171 FSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-V 347 FSGRTVISPDPNL +D+V +P RVA+ LTYPE+VT++N+ +L VI GP +PGAN+ + Sbjct: 373 FSGRTVISPDPNLSIDEVAVPDRVAKILTYPEKVTRYNKHKLQQLVINGPKVHPGANYLL 432 Query: 348 ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVP 527 + ++ +R LRYG+R K+AK L G VVERH+ DGDVVLFNRQPSLHR+SI+SH AK+ P Sbjct: 433 KKNEDARRNLRYGDRVKLAKQLQYGDVVERHIEDGDVVLFNRQPSLHRLSILSHYAKIRP 492 Query: 528 HRTFRFNECVC 560 RTFR NECVC Sbjct: 493 WRTFRLNECVC 503 [56][TOP] >UniRef100_A5E7R0 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus RepID=A5E7R0_LODEL Length = 1450 Score = 238 bits (607), Expect = 2e-61 Identities = 114/197 (57%), Positives = 154/197 (78%), Gaps = 11/197 (5%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATN---LPPL-------ASTAKPLRGISQRLKGKTGRFRGNL 152 M+ W++LQ+ A ++NSD+ N +P + + ++KP+RG QRLKGK GRFRGNL Sbjct: 311 MEQWDYLQLSVAMYINSDSANPALIPSVGGGGGGGSKSSKPIRGFCQRLKGKQGRFRGNL 370 Query: 153 SGKRVDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYP 332 SGKRVDFSGRTVISPDPNL++D+V +P RVA+ LTYPE+ T++N+++L +I GPD +P Sbjct: 371 SGKRVDFSGRTVISPDPNLKIDEVAVPDRVAKVLTYPEKCTRYNKRKLQQLIINGPDHHP 430 Query: 333 GANFVE-TDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSH 509 GAN+V+ ++ KR LR+G+R K+A+ L +G +VERH+ DGDVVLFNRQPSLHR+SI+SH Sbjct: 431 GANYVQKQNEPGKRNLRFGDRHKLARSLQVGDLVERHIEDGDVVLFNRQPSLHRLSILSH 490 Query: 510 SAKVVPHRTFRFNECVC 560 AK+ P RTFR NECVC Sbjct: 491 YAKIRPWRTFRLNECVC 507 [57][TOP] >UniRef100_Q18566 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis elegans RepID=Q18566_CAEEL Length = 1400 Score = 238 bits (606), Expect = 3e-61 Identities = 114/184 (61%), Positives = 141/184 (76%), Gaps = 1/184 (0%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 WE LQ++ A ++NS+ + LPP + +R +QRLKGK GRFRGNL GKRVDFSGRTVI Sbjct: 306 WEHLQIQCALYINSEMSGLPPDMQPKRAMRAFTQRLKGKQGRFRGNLCGKRVDFSGRTVI 365 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDDGNK 368 SPDPNLR+DQVG+P+ VA TLT+PE V N +++ VI G D +PGAN+ VE GNK Sbjct: 366 SPDPNLRIDQVGVPIHVAMTLTFPEIVNASNIEKMRQLVINGSDVHPGANYLVEKKTGNK 425 Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 + L+YG R ++AK+L +G +ERHL D DVVLFNRQPSLH+ISIMSH AKV+P RTFRFN Sbjct: 426 KLLKYGKRDELAKNLRMGDTIERHLDDNDVVLFNRQPSLHKISIMSHRAKVMPGRTFRFN 485 Query: 549 ECVC 560 EC C Sbjct: 486 ECAC 489 [58][TOP] >UniRef100_UPI000022105F Hypothetical protein CBG05787 n=1 Tax=Caenorhabditis briggsae AF16 RepID=UPI000022105F Length = 1402 Score = 237 bits (604), Expect = 5e-61 Identities = 113/184 (61%), Positives = 142/184 (77%), Gaps = 1/184 (0%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 WE LQ++ A ++NS+ + LPP + +R +QRLKGK GRFRGNL GKRVDFSGRTVI Sbjct: 306 WEHLQIQCALYINSEMSGLPPDMQPKRAMRAFTQRLKGKQGRFRGNLCGKRVDFSGRTVI 365 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDDGNK 368 SPDPNLR+DQVG+P+ VA TLT+PE V N ++ ++ G D +PGAN+ V+ G+K Sbjct: 366 SPDPNLRIDQVGVPVHVAMTLTFPEIVNASNIDKMRKLIVNGSDVHPGANYLVDKKTGHK 425 Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 + L+YGNR+++AK+L LG VERHL D DVVLFNRQPSLH+ISIMSH AKV+P RTFRFN Sbjct: 426 KLLKYGNREELAKNLRLGDTVERHLDDNDVVLFNRQPSLHKISIMSHRAKVMPGRTFRFN 485 Query: 549 ECVC 560 EC C Sbjct: 486 ECAC 489 [59][TOP] >UniRef100_UPI0000E48917 PREDICTED: similar to RNA polymerase III largest subunit, partial n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E48917 Length = 427 Score = 236 bits (601), Expect = 1e-60 Identities = 112/187 (59%), Positives = 142/187 (75%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ+ A ++NS+ + LP KP RG QRLKGK GRFRGNLSGKRVD+S R Sbjct: 33 MEDWDFLQLACALYINSETSGLPLNMQPKKPTRGFCQRLKGKQGRFRGNLSGKRVDYSSR 92 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV-ETDD 359 TVISPDPNLR+D+V +P VA+ LTYPE+VTK N + V+ G D +PGANF+ + Sbjct: 93 TVISPDPNLRIDEVAVPELVAKLLTYPEKVTKSNMALMRKLVMNGCDAHPGANFIHQRHT 152 Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 NK FL+YGNR+K+A++L G VERHL+DGD+VLFNRQPSLH++SIM+H A+V P RTF Sbjct: 153 QNKMFLKYGNRQKMAQELKYGDTVERHLIDGDIVLFNRQPSLHKLSIMAHKARVKPFRTF 212 Query: 540 RFNECVC 560 RFN CVC Sbjct: 213 RFNACVC 219 [60][TOP] >UniRef100_UPI0000D57400 PREDICTED: similar to AGAP004703-PA n=1 Tax=Tribolium castaneum RepID=UPI0000D57400 Length = 1390 Score = 236 bits (601), Expect = 1e-60 Identities = 113/186 (60%), Positives = 145/186 (77%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 +GW++LQ++ A ++NS+ + +P KP RG+ QRLKGK GRFRGNLSGKRVDFS RT Sbjct: 318 EGWDFLQLQTALYINSELSGIPLAMMPKKPGRGLVQRLKGKQGRFRGNLSGKRVDFSSRT 377 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV-ETDDG 362 VISPDPNL++DQVG+PL +A+ LT+PERV N + VI GPD +PGAN+V + Sbjct: 378 VISPDPNLQIDQVGVPLHIAKILTFPERVIHANIDVMRQLVINGPDKWPGANYVQQKGSA 437 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K+FL+YGNR+K+A++L LG +VERHL + DVVLFNRQPSLH++SIM+H KV HRTFR Sbjct: 438 FKKFLKYGNREKLAQELKLGDLVERHLHNDDVVLFNRQPSLHKLSIMAHRTKVHQHRTFR 497 Query: 543 FNECVC 560 FNECVC Sbjct: 498 FNECVC 503 [61][TOP] >UniRef100_Q6CB20 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica RepID=Q6CB20_YARLI Length = 1483 Score = 236 bits (601), Expect = 1e-60 Identities = 118/187 (63%), Positives = 147/187 (78%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ WE LQ+ A ++NSD T P S +KP+R ++QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 311 MEQWELLQLAVAVYINSD-TPQGPGQSASKPIRALTQRLKGKQGRFRGNLSGKRVDFSGR 369 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV-ETDD 359 TVISPDPNLR+DQV +P RVA+ LTYPERVT HN ++L VI GP +PGAN++ + + Sbjct: 370 TVISPDPNLRIDQVAVPDRVAKILTYPERVTSHNIEKLRNLVITGPSQHPGANYLFKKGE 429 Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 +R LR+G+R K+A+ L +G VVERHL DGDVVLFNRQPSLHR+SI++H A++ P RTF Sbjct: 430 SLRRNLRFGDRAKIAERLEIGDVVERHLEDGDVVLFNRQPSLHRLSILAHFAQIRPWRTF 489 Query: 540 RFNECVC 560 R NECVC Sbjct: 490 RLNECVC 496 [62][TOP] >UniRef100_C4Y380 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y380_CLAL4 Length = 1491 Score = 236 bits (601), Expect = 1e-60 Identities = 114/195 (58%), Positives = 151/195 (77%), Gaps = 9/195 (4%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPL--------ASTAKPLRGISQRLKGKTGRFRGNLSG 158 M+ W++LQ+ A ++NSD+ N L + ++KP+RG QRLKGK GRFRGNLSG Sbjct: 343 MEQWDYLQLSVAMYINSDSANPALLPGGMGGSGSKSSKPIRGFCQRLKGKQGRFRGNLSG 402 Query: 159 KRVDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA 338 KRVDFSGRTVISPDPNLR+D+V +P RVA+ LTYPE+ T++NR++L ++ GP +PGA Sbjct: 403 KRVDFSGRTVISPDPNLRIDEVAVPDRVAKILTYPEKCTRYNRQKLQKLILNGPTVHPGA 462 Query: 339 NFV-ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSA 515 N+V + ++ KR L++G+R K+AK L +G +VERH+ DGDVVLFNRQPSLHR+SI+SH A Sbjct: 463 NYVLKQNEVAKRNLKFGDRVKLAKTLRIGDIVERHIEDGDVVLFNRQPSLHRLSILSHYA 522 Query: 516 KVVPHRTFRFNECVC 560 K+ P RTFR NECVC Sbjct: 523 KIRPWRTFRLNECVC 537 [63][TOP] >UniRef100_C1E5P6 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299 RepID=C1E5P6_9CHLO Length = 1479 Score = 235 bits (599), Expect = 2e-60 Identities = 110/187 (58%), Positives = 144/187 (77%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSG 179 M+ W++LQ++ A ++NS+ L KPLRG QRLKGK GRFRGNLSGKRVDFSG Sbjct: 322 MENWDFLQIQCAMYINSELPGLSAQYQGPGKPLRGFVQRLKGKQGRFRGNLSGKRVDFSG 381 Query: 180 RTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDD 359 RTVISPDPNLR+D+VG+P+ +A+ +TYPE V++HN + + V G + +PGANFV Sbjct: 382 RTVISPDPNLRIDEVGVPMHIAKMMTYPEVVSRHNIEMIRERVRNGMNKHPGANFVRFKS 441 Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 G ++L+YG+R++VA +L G VVERHL DGDV+LFNRQPSLH++SIM+H A+V+P RT Sbjct: 442 GGTQYLKYGDRRRVASELKYGDVVERHLHDGDVLLFNRQPSLHKMSIMAHRARVMPWRTL 501 Query: 540 RFNECVC 560 RFNECVC Sbjct: 502 RFNECVC 508 [64][TOP] >UniRef100_B7G2E6 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G2E6_PHATR Length = 1281 Score = 234 bits (596), Expect = 4e-60 Identities = 116/189 (61%), Positives = 149/189 (78%), Gaps = 2/189 (1%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLP-PLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSG 179 M+ W++LQV+ A+++N + L P+ S KP+RG+ QRLKGK GRFRGNLSGKRVDFS Sbjct: 267 MEEWDFLQVQVAQYINGEMPGLQRPIGS--KPMRGLCQRLKGKQGRFRGNLSGKRVDFSA 324 Query: 180 RTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDD 359 RTVISPDPNLRVDQVG+P RVA+T+TYPERV+++N ++L V GPD +PGAN + D Sbjct: 325 RTVISPDPNLRVDQVGVPERVAKTMTYPERVSRYNIEKLRQRVRNGPDVHPGANLIRMKD 384 Query: 360 GN-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536 G+ + L +G+R+ VAK+L G VVERH+ D DVVLFNRQPSLH++SIM+H AKV+ +T Sbjct: 385 GSFVKSLSFGDRELVAKNLRYGDVVERHMEDDDVVLFNRQPSLHKVSIMAHRAKVMEWKT 444 Query: 537 FRFNECVCA 563 FRFN CVCA Sbjct: 445 FRFNTCVCA 453 [65][TOP] >UniRef100_UPI00019259E0 PREDICTED: similar to predicted protein, partial n=1 Tax=Hydra magnipapillata RepID=UPI00019259E0 Length = 534 Score = 233 bits (595), Expect = 6e-60 Identities = 114/187 (60%), Positives = 139/187 (74%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++N + + +P K RG QRL GK GRFRGNLSGKRVDFSGR Sbjct: 307 MEDWDFLQLQCALYINGEMSGIPMNMQPKKATRGFVQRLNGKQGRFRGNLSGKRVDFSGR 366 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV-ETDD 359 TVISPDPNLR+DQV +P+ VA+ LT+PE V K N K + V G D +PGANFV + Sbjct: 367 TVISPDPNLRIDQVAVPIHVAKVLTFPEPVNKFNIKLMKELVKNGADIHPGANFVISKNT 426 Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 G KR+L+YGNR VA +L G +VERHL+D DVVLFNRQPSLHR+SIM+H A V PHRTF Sbjct: 427 GIKRYLKYGNRALVANELRYGDIVERHLMDNDVVLFNRQPSLHRLSIMAHYATVRPHRTF 486 Query: 540 RFNECVC 560 RFNECVC Sbjct: 487 RFNECVC 493 [66][TOP] >UniRef100_Q756K2 DNA-directed RNA polymerase n=1 Tax=Eremothecium gossypii RepID=Q756K2_ASHGO Length = 1459 Score = 232 bits (592), Expect = 1e-59 Identities = 114/193 (59%), Positives = 149/193 (77%), Gaps = 7/193 (3%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPL------ASTAKPLRGISQRLKGKTGRFRGNLSGKR 164 M+ W++LQ+ A ++NSD+ N P L KP+RG QRLKGK GRFRGNLSGKR Sbjct: 313 MEQWDYLQMAVAMYINSDSVN-PALMPGGNGGGKTKPIRGFCQRLKGKQGRFRGNLSGKR 371 Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344 VDFSGRTVISPDPNL +D+V +P RVA+ LT+PE+VT++N+ +L ++ G + +PGAN+ Sbjct: 372 VDFSGRTVISPDPNLSIDEVAVPDRVAKVLTFPEKVTRYNKHKLQQLIVNGANVHPGANY 431 Query: 345 -VETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521 ++ ++ +R LRYG+R K+AK+L +G VVERHL DGDVVLFNRQPSLHR+SI+SH AK+ Sbjct: 432 LLKKNEEARRNLRYGDRIKLAKNLQIGDVVERHLEDGDVVLFNRQPSLHRLSILSHYAKI 491 Query: 522 VPHRTFRFNECVC 560 P RTFR NECVC Sbjct: 492 RPWRTFRLNECVC 504 [67][TOP] >UniRef100_A4RTE2 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RTE2_OSTLU Length = 1395 Score = 232 bits (591), Expect = 2e-59 Identities = 108/187 (57%), Positives = 141/187 (75%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLP-PLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSG 179 M+ W++LQ++ A ++NS+ L KPLRG QRLKGK GRFRGNLSGKRVDFS Sbjct: 320 MENWDFLQIQCAMYINSELPGLSLQYQGPGKPLRGFVQRLKGKQGRFRGNLSGKRVDFSA 379 Query: 180 RTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDD 359 RTVISPDPNLR+D+VG+P+ +A+T+TYPE V KHN L V G +PGANFV+ Sbjct: 380 RTVISPDPNLRIDEVGVPIHIAKTMTYPEVVNKHNMVMLRERVRNGMAKHPGANFVKFAS 439 Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 G ++L+YG+R+K+A +L G +VERHL DGD++LFNRQPSLH++SIM+H A+++ RT Sbjct: 440 GGMQYLKYGDRRKIASELKFGDIVERHLHDGDILLFNRQPSLHKMSIMAHKARIMECRTL 499 Query: 540 RFNECVC 560 RFNECVC Sbjct: 500 RFNECVC 506 [68][TOP] >UniRef100_Q6FKG9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata RepID=Q6FKG9_CANGA Length = 1459 Score = 231 bits (590), Expect = 2e-59 Identities = 116/193 (60%), Positives = 150/193 (77%), Gaps = 7/193 (3%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATN--LPPLASTA----KPLRGISQRLKGKTGRFRGNLSGKR 164 M+ W++LQ+ A ++NSD+ N + P +ST KP+RG QRLKGK GRFRGNLSGKR Sbjct: 313 MEHWDYLQMTVAMYINSDSINPAMLPGSSTGGGKVKPIRGFCQRLKGKQGRFRGNLSGKR 372 Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344 VDFSGRTVISPDPNL +D+V +P VA+ LT+PE+VT++N K+L V GP+ +PGAN+ Sbjct: 373 VDFSGRTVISPDPNLSIDEVAVPQLVAKVLTFPEKVTRYNIKKLRQLVQNGPNVHPGANY 432 Query: 345 -VETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521 ++ ++ +R LRYG+R+K+A +L G VVERHL DGDVVLFNRQPSLHR+SI+SH AK+ Sbjct: 433 LLKKNEEARRNLRYGDRQKLANNLQYGDVVERHLEDGDVVLFNRQPSLHRLSILSHYAKI 492 Query: 522 VPHRTFRFNECVC 560 P RTFR NECVC Sbjct: 493 RPWRTFRLNECVC 505 [69][TOP] >UniRef100_B4MT76 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni RepID=B4MT76_DROWI Length = 1381 Score = 230 bits (587), Expect = 5e-59 Identities = 111/186 (59%), Positives = 141/186 (75%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 + W++LQ+ A + +S+ + +P + K +RGI QRLKGK GRFRGNLSGKRVDFSGRT Sbjct: 307 EDWDFLQLHVALYFHSEISGIPLNMAPKKTMRGIVQRLKGKQGRFRGNLSGKRVDFSGRT 366 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365 VISPDPNL ++QVG+P+RVAR LTYPERV N + + V GP +PGAN+V+ + Sbjct: 367 VISPDPNLMINQVGVPVRVARILTYPERVNPANIRHMKQLVRNGPSLHPGANYVQQRGSS 426 Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K++L YGNR+KVA++L G +VERHL D D+VLFNRQPSLH++SIM H AKV P RTFR Sbjct: 427 FKKYLAYGNREKVAQELKCGDIVERHLRDDDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 486 Query: 543 FNECVC 560 FNEC C Sbjct: 487 FNECTC 492 [70][TOP] >UniRef100_B0WFY1 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus RepID=B0WFY1_CULQU Length = 1303 Score = 229 bits (585), Expect = 8e-59 Identities = 112/186 (60%), Positives = 137/186 (73%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 + W++LQ+ A + NS+ + +P KP RGI QRLKGK GRFRGNLSGKRVDFS RT Sbjct: 310 EDWDYLQLHCALYFNSELSGIPLSLMPKKPTRGIVQRLKGKQGRFRGNLSGKRVDFSART 369 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV-ETDDG 362 VISPDPNL + QVG+P RVA+ LT+PERV N R+ + G + +PGAN+V + Sbjct: 370 VISPDPNLMIHQVGVPDRVAKILTFPERVNTANINRMRQLIKNGTEKHPGANYVQQKGSA 429 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K++L YGNR KVA+DL G +VERHL+DGDVVLFNRQPSLH++SIM H AKV P RTFR Sbjct: 430 FKKYLAYGNRDKVAQDLKCGDIVERHLMDGDVVLFNRQPSLHKLSIMCHVAKVQPQRTFR 489 Query: 543 FNECVC 560 FNEC C Sbjct: 490 FNECAC 495 [71][TOP] >UniRef100_Q7PMU6 DNA-directed RNA polymerase n=1 Tax=Anopheles gambiae RepID=Q7PMU6_ANOGA Length = 1379 Score = 229 bits (584), Expect = 1e-58 Identities = 111/186 (59%), Positives = 137/186 (73%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 + W++LQ+ A + NS+ + +P KP RGI QRLKGK GRFRGNLSGKRVDFS RT Sbjct: 311 EDWDYLQLHCALYFNSELSGIPLSLMPKKPTRGIVQRLKGKQGRFRGNLSGKRVDFSART 370 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV-ETDDG 362 VISPDPNL + QVG+P RVA+ LT+PE+V N R+ + G + +PGAN+V + Sbjct: 371 VISPDPNLMIHQVGVPDRVAKILTFPEKVNSANITRMRQLIRNGTEKHPGANYVQQKGSA 430 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K++L YGNR KVA+DL G +VERHL+DGDVVLFNRQPSLH++SIM H AKV P RTFR Sbjct: 431 FKKYLAYGNRDKVAQDLKCGDIVERHLIDGDVVLFNRQPSLHKLSIMCHVAKVQPQRTFR 490 Query: 543 FNECVC 560 FNEC C Sbjct: 491 FNECAC 496 [72][TOP] >UniRef100_A8Q6K6 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q6K6_MALGO Length = 1376 Score = 229 bits (584), Expect = 1e-58 Identities = 113/189 (59%), Positives = 145/189 (76%), Gaps = 2/189 (1%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 ++ W++LQ+ A ++NS+ +PP+ S KP+RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 284 VEQWDFLQLSVALYINSEMPGVPPM-SGHKPIRGFCQRLKGKQGRFRGNLSGKRVDFSGR 342 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDD 359 TVISPDPNL +D++ +P RVA+ LTYPERV HN + + AV G DT+PGAN+ V D Sbjct: 343 TVISPDPNLAIDEIAVPERVAKILTYPERVFAHNIEAMRQAVRNGTDTHPGANYHVNGRD 402 Query: 360 GNKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536 G KRFL++ G R +A +L +G +VERH+ DGD+VLFNRQPSLH++SIM H AK+ P RT Sbjct: 403 GFKRFLKFPGMRDDIAANLRVGDIVERHIRDGDIVLFNRQPSLHKLSIMCHRAKIRPWRT 462 Query: 537 FRFNECVCA 563 FR NECVC+ Sbjct: 463 FRLNECVCS 471 [73][TOP] >UniRef100_UPI00019836CE PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI00019836CE Length = 1383 Score = 229 bits (583), Expect = 1e-58 Identities = 105/184 (57%), Positives = 138/184 (75%) Frame = +3 Query: 9 GWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTV 188 GW++LQ+E A+++NSD +P A+PL G QRLKGK GRFRGNLSGKRV+++GRTV Sbjct: 308 GWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTV 367 Query: 189 ISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNK 368 ISPDPNL++ +V IP+ +A+ L+YPERV+ HN ++L ++ GP YPGA + DG+ Sbjct: 368 ISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRYPDGSM 427 Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 R L + RK+ A +L G +VERHL DGDVVLFNRQPSLHR+SIM H A+++P RT RFN Sbjct: 428 RSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFN 487 Query: 549 ECVC 560 E VC Sbjct: 488 ESVC 491 [74][TOP] >UniRef100_B8C4M1 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C4M1_THAPS Length = 1422 Score = 229 bits (583), Expect = 1e-58 Identities = 111/189 (58%), Positives = 142/189 (75%), Gaps = 2/189 (1%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+GW+ LQ + A+++N D L KP+RG+ QRLKGK GRFRGNLSGKRVDFS R Sbjct: 330 MEGWDVLQSQVAQYINGDMPGLKKEMGH-KPIRGLCQRLKGKQGRFRGNLSGKRVDFSAR 388 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLRVDQVG+P+ VA+ +TYPE V+++N ++L V+ GPD +PGAN + Sbjct: 389 TVISPDPNLRVDQVGVPVHVAKIMTYPETVSRYNIEKLRQRVLNGPDVHPGANLIRPGGE 448 Query: 363 NK--RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536 N + L Y +R++ A+ L +G +VERH+ DGDVVLFNRQPSLH++SIMSH KV+P RT Sbjct: 449 NSFVKSLAYADRERAAQTLRIGDIVERHMEDGDVVLFNRQPSLHKLSIMSHQVKVMPWRT 508 Query: 537 FRFNECVCA 563 FRFN CVCA Sbjct: 509 FRFNICVCA 517 [75][TOP] >UniRef100_A7NZA4 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7NZA4_VITVI Length = 1370 Score = 229 bits (583), Expect = 1e-58 Identities = 105/184 (57%), Positives = 138/184 (75%) Frame = +3 Query: 9 GWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTV 188 GW++LQ+E A+++NSD +P A+PL G QRLKGK GRFRGNLSGKRV+++GRTV Sbjct: 308 GWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTV 367 Query: 189 ISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNK 368 ISPDPNL++ +V IP+ +A+ L+YPERV+ HN ++L ++ GP YPGA + DG+ Sbjct: 368 ISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRYPDGSM 427 Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 R L + RK+ A +L G +VERHL DGDVVLFNRQPSLHR+SIM H A+++P RT RFN Sbjct: 428 RSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFN 487 Query: 549 ECVC 560 E VC Sbjct: 488 ESVC 491 [76][TOP] >UniRef100_UPI00017927B1 PREDICTED: similar to AGAP004703-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI00017927B1 Length = 1355 Score = 228 bits (582), Expect = 2e-58 Identities = 108/186 (58%), Positives = 140/186 (75%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 + WE+LQ+ A ++NSD + + K RG QRLKGK GRFRGNLSGKRVDF+ R+ Sbjct: 309 EDWEYLQLHCALYINSDLSGVSRTMMPKKIARGCVQRLKGKHGRFRGNLSGKRVDFTARS 368 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365 VISPDPNLR+++VG+P+R+A+ LTYP++V N + + V+ GP+ +PGANFVE Sbjct: 369 VISPDPNLRIEEVGVPVRMAKILTYPQKVCPANIELMRKLVMNGPEIHPGANFVELQGSK 428 Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K++LR+GNR +AKDL +G +VERHL DGD+VLFNRQPSLHR+SIM H AKV+ H T R Sbjct: 429 LKKYLRFGNRPAIAKDLKIGDIVERHLSDGDIVLFNRQPSLHRLSIMCHRAKVLEHNTLR 488 Query: 543 FNECVC 560 FNECVC Sbjct: 489 FNECVC 494 [77][TOP] >UniRef100_Q16SE0 DNA-directed RNA polymerase n=1 Tax=Aedes aegypti RepID=Q16SE0_AEDAE Length = 1298 Score = 228 bits (582), Expect = 2e-58 Identities = 111/186 (59%), Positives = 137/186 (73%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 + W++LQ+ A + NS+ + +P KP RGI QRLKGK GRFRGNLSGKRVDFS RT Sbjct: 310 EDWDYLQLHCALYFNSELSGIPLSLMPKKPTRGIVQRLKGKQGRFRGNLSGKRVDFSART 369 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV-ETDDG 362 VISPDPNL + QVG+P RVA+ LT+PERV N ++ + G + +PGAN+V + Sbjct: 370 VISPDPNLMIHQVGVPDRVAKILTFPERVNTANINKMRQLIKNGTEKHPGANYVQQKGSA 429 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K++L YGNR KVA+DL G +VERHL+DGDVVLFNRQPSLH++SIM H AKV P RTFR Sbjct: 430 FKKYLAYGNRDKVAQDLKCGDIVERHLMDGDVVLFNRQPSLHKLSIMCHVAKVQPQRTFR 489 Query: 543 FNECVC 560 FNEC C Sbjct: 490 FNECAC 495 [78][TOP] >UniRef100_Q16PD2 DNA-directed RNA polymerase n=1 Tax=Aedes aegypti RepID=Q16PD2_AEDAE Length = 1298 Score = 228 bits (582), Expect = 2e-58 Identities = 111/186 (59%), Positives = 137/186 (73%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 + W++LQ+ A + NS+ + +P KP RGI QRLKGK GRFRGNLSGKRVDFS RT Sbjct: 310 EDWDYLQLHCALYFNSELSGIPLSLMPKKPTRGIVQRLKGKQGRFRGNLSGKRVDFSART 369 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV-ETDDG 362 VISPDPNL + QVG+P RVA+ LT+PERV N ++ + G + +PGAN+V + Sbjct: 370 VISPDPNLMIHQVGVPDRVAKILTFPERVNTANINKMRQLIKNGTEKHPGANYVQQKGSA 429 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K++L YGNR KVA+DL G +VERHL+DGDVVLFNRQPSLH++SIM H AKV P RTFR Sbjct: 430 FKKYLAYGNRDKVAQDLKCGDIVERHLMDGDVVLFNRQPSLHKLSIMCHVAKVQPQRTFR 489 Query: 543 FNECVC 560 FNEC C Sbjct: 490 FNECAC 495 [79][TOP] >UniRef100_B4MAW8 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis RepID=B4MAW8_DROVI Length = 1044 Score = 228 bits (582), Expect = 2e-58 Identities = 110/186 (59%), Positives = 141/186 (75%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 + W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFRGNLSGKRVDFSGRT Sbjct: 307 EDWDFLQLHVALYFHSEISGIPLNMAPKKTTRGIVQRLKGKQGRFRGNLSGKRVDFSGRT 366 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365 VISPDPNL ++QVG+P+RVA+ LTYPERV N +++ V GP +PGAN+V+ + Sbjct: 367 VISPDPNLMINQVGVPVRVAKILTYPERVNPANIRQMKQLVRNGPSMHPGANYVQQRGSS 426 Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K++L YGNR+KVA++L G +VERHL D D+VLFNRQPSLH++SIM H AKV P RTFR Sbjct: 427 FKKYLAYGNREKVAQELKCGDIVERHLRDDDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 486 Query: 543 FNECVC 560 FNEC C Sbjct: 487 FNECAC 492 [80][TOP] >UniRef100_Q01DV6 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri RepID=Q01DV6_OSTTA Length = 1406 Score = 228 bits (581), Expect = 2e-58 Identities = 108/187 (57%), Positives = 140/187 (74%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLP-PLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSG 179 M+ W++LQ++ A ++NS+ L KPLRG QRLKGK GRFRGNLSGKRVDFS Sbjct: 321 MENWDFLQIQCAMYINSELPGLSLQYQGPGKPLRGFVQRLKGKQGRFRGNLSGKRVDFSA 380 Query: 180 RTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDD 359 RTVISPDPNL +D+VGIP+ +A+T+TYPE V +HN L V G +PGANFV+ Sbjct: 381 RTVISPDPNLGIDEVGIPIYIAKTMTYPEVVNRHNIAMLRERVRNGMAEHPGANFVKFAS 440 Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 G ++L+YG+R+K+A +L G +VERHL DGD++LFNRQPSLH++SIM+H A+V+P RT Sbjct: 441 GGMQYLKYGDRRKIASELRFGDIVERHLHDGDILLFNRQPSLHKMSIMAHKARVMPCRTL 500 Query: 540 RFNECVC 560 R NECVC Sbjct: 501 RLNECVC 507 [81][TOP] >UniRef100_C5YBD9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor RepID=C5YBD9_SORBI Length = 1391 Score = 228 bits (581), Expect = 2e-58 Identities = 110/185 (59%), Positives = 140/185 (75%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 D W++LQ++ ++NSDA LP RG+ QRLKGKTGRFRGNLSGKR +++GRT Sbjct: 302 DCWQYLQLQVVEYVNSDAPCLPDSQH-----RGLVQRLKGKTGRFRGNLSGKRTEYTGRT 356 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365 VISPDPNL++ +V IP+ +AR LTYPERV+ +N ++L + GP YPGANFV DG Sbjct: 357 VISPDPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANFVTQPDGM 416 Query: 366 KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545 K+ L+YG+R+ A+DL G +VERHL DGDVVLFNRQPSLHR+SIMSH A+++P RT RF Sbjct: 417 KQSLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRF 476 Query: 546 NECVC 560 NE VC Sbjct: 477 NESVC 481 [82][TOP] >UniRef100_B4PX62 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba RepID=B4PX62_DROYA Length = 1383 Score = 228 bits (581), Expect = 2e-58 Identities = 110/186 (59%), Positives = 140/186 (75%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 + W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFR NLSGKRVDFSGRT Sbjct: 307 EDWDFLQLHVALYFHSEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRT 366 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365 VISPDPNL ++QVG+P+RVA+ LTYPERV N + + V GP +PGAN+V+ + Sbjct: 367 VISPDPNLMINQVGVPVRVAKILTYPERVNPANMRHMRELVRNGPSMHPGANYVQQRGSS 426 Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K++L YGNR+KVA++L G +VERHL DGD+VLFNRQPSLH++SIM H AKV P RTFR Sbjct: 427 FKKYLAYGNREKVAQELKCGDIVERHLRDGDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 486 Query: 543 FNECVC 560 FNEC C Sbjct: 487 FNECAC 492 [83][TOP] >UniRef100_B3NXK5 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta RepID=B3NXK5_DROER Length = 1383 Score = 228 bits (581), Expect = 2e-58 Identities = 110/186 (59%), Positives = 140/186 (75%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 + W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFR NLSGKRVDFSGRT Sbjct: 307 EDWDFLQLHVALYFHSEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRT 366 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365 VISPDPNL ++QVG+P+RVA+ LTYPERV N + + V GP +PGAN+V+ + Sbjct: 367 VISPDPNLMINQVGVPVRVAKILTYPERVNPANMRHMRELVRNGPSMHPGANYVQQRGSS 426 Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K++L YGNR+KVA++L G +VERHL DGD+VLFNRQPSLH++SIM H AKV P RTFR Sbjct: 427 FKKYLAYGNREKVAQELKCGDIVERHLRDGDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 486 Query: 543 FNECVC 560 FNEC C Sbjct: 487 FNECAC 492 [84][TOP] >UniRef100_B3MLS5 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae RepID=B3MLS5_DROAN Length = 1301 Score = 228 bits (581), Expect = 2e-58 Identities = 110/186 (59%), Positives = 141/186 (75%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 + W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFR NLSGKRVDFSGRT Sbjct: 307 EDWDFLQLHVALYFHSEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRT 366 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365 VISPDPNL ++QVG+P+RVA+ LTYPERV + N + + V GP T+PGAN+V+ + Sbjct: 367 VISPDPNLMINQVGVPVRVAKILTYPERVNQANMRHMRQLVRNGPSTHPGANYVQQRGSS 426 Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K++L YGNR+KVA++L G +VERHL D D+VLFNRQPSLH++SIM H AKV P RTFR Sbjct: 427 FKKYLAYGNREKVAQELRCGDIVERHLRDDDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 486 Query: 543 FNECVC 560 FNEC C Sbjct: 487 FNECAC 492 [85][TOP] >UniRef100_B4L5G1 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis RepID=B4L5G1_DROMO Length = 1382 Score = 228 bits (580), Expect = 3e-58 Identities = 110/186 (59%), Positives = 141/186 (75%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 + W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFRGNLSGKRVDFSGRT Sbjct: 307 EDWDFLQLHVALYFHSEISGIPLNMAPKKTTRGIVQRLKGKQGRFRGNLSGKRVDFSGRT 366 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365 VISPDPNL ++QVG+P+RVA+ LTYPERV N +++ V GP +PGAN+V+ + Sbjct: 367 VISPDPNLMINQVGVPVRVAKILTYPERVNPANIRQMKQLVRNGPAMHPGANYVQQRGSS 426 Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K++L YGNR+KVA++L G +VERHL D D+VLFNRQPSLH++SIM H AKV P RTFR Sbjct: 427 FKKYLAYGNREKVAQELKCGDIVERHLRDDDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 486 Query: 543 FNECVC 560 FNEC C Sbjct: 487 FNECAC 492 [86][TOP] >UniRef100_A9UN86 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drosophila melanogaster RepID=A9UN86_DROME Length = 1410 Score = 228 bits (580), Expect = 3e-58 Identities = 111/186 (59%), Positives = 140/186 (75%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 + W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFR NLSGKRVDFSGRT Sbjct: 334 EDWDFLQLHVALYFHSEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRT 393 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365 VISPDPNL ++QVG+P+RVA+ LTYPERV N + + V GP +PGAN+V+ + Sbjct: 394 VISPDPNLMINQVGVPVRVAKILTYPERVNPANIRHMRELVRNGPSMHPGANYVQQRGSS 453 Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K++L YGNR+KVA++L G VVERHL DGD+VLFNRQPSLH++SIM H AKV P RTFR Sbjct: 454 FKKYLAYGNREKVAQELKCGDVVERHLRDGDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 513 Query: 543 FNECVC 560 FNEC C Sbjct: 514 FNECAC 519 [87][TOP] >UniRef100_A8JUY3 DNA-directed RNA polymerase n=1 Tax=Drosophila melanogaster RepID=A8JUY3_DROME Length = 1376 Score = 228 bits (580), Expect = 3e-58 Identities = 111/186 (59%), Positives = 140/186 (75%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 + W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFR NLSGKRVDFSGRT Sbjct: 307 EDWDFLQLHVALYFHSEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRT 366 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365 VISPDPNL ++QVG+P+RVA+ LTYPERV N + + V GP +PGAN+V+ + Sbjct: 367 VISPDPNLMINQVGVPVRVAKILTYPERVNPANIRHMRELVRNGPSMHPGANYVQQRGSS 426 Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K++L YGNR+KVA++L G VVERHL DGD+VLFNRQPSLH++SIM H AKV P RTFR Sbjct: 427 FKKYLAYGNREKVAQELKCGDVVERHLRDGDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 486 Query: 543 FNECVC 560 FNEC C Sbjct: 487 FNECAC 492 [88][TOP] >UniRef100_B4JN80 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi RepID=B4JN80_DROGR Length = 1303 Score = 227 bits (579), Expect = 4e-58 Identities = 110/186 (59%), Positives = 140/186 (75%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 + W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFRGNLSGKRVDFSGRT Sbjct: 307 EDWDFLQLHVALYFHSEISGIPLNMAPKKTTRGIVQRLKGKQGRFRGNLSGKRVDFSGRT 366 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365 VISPDPNL ++QVG+P+RVA+ LTYPERV N + + V GP +PGAN+V+ + Sbjct: 367 VISPDPNLMINQVGVPVRVAKILTYPERVNPANIRIMKQLVRNGPSVHPGANYVQQRGSS 426 Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K++L YGNR+KVA++L G +VERHL D D+VLFNRQPSLH++SIM H AKV P RTFR Sbjct: 427 FKKYLAYGNREKVAQELKCGDIVERHLRDDDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 486 Query: 543 FNECVC 560 FNEC C Sbjct: 487 FNECAC 492 [89][TOP] >UniRef100_B4HCC5 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis RepID=B4HCC5_DROPE Length = 968 Score = 227 bits (578), Expect = 5e-58 Identities = 110/186 (59%), Positives = 140/186 (75%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 + W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFR NLSGKRVDFSGRT Sbjct: 307 EDWDFLQLHVALYFHSEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRT 366 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365 VISPDPNL ++QVG+P+RVA+ LTYPERV N + + V GP T+PGAN+V+ + Sbjct: 367 VISPDPNLMINQVGVPVRVAKILTYPERVNLANIRHMKHLVRNGPGTHPGANYVQQRGSS 426 Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K++L YGNR+KVA++L G +VERHL D D+VLFNRQPSLH++SIM H AKV P RTFR Sbjct: 427 FKKYLAYGNREKVAQELKCGDIVERHLCDNDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 486 Query: 543 FNECVC 560 FNEC C Sbjct: 487 FNECAC 492 [90][TOP] >UniRef100_B4H9Z6 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis RepID=B4H9Z6_DROPE Length = 424 Score = 227 bits (578), Expect = 5e-58 Identities = 110/186 (59%), Positives = 140/186 (75%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 + W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFR NLSGKRVDFSGRT Sbjct: 87 EDWDFLQLHVALYFHSEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRT 146 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365 VISPDPNL ++QVG+P+RVA+ LTYPERV N + + V GP T+PGAN+V+ + Sbjct: 147 VISPDPNLMINQVGVPVRVAKILTYPERVNLANIRHMKHLVRNGPGTHPGANYVQQRGSS 206 Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K++L YGNR+KVA++L G +VERHL D D+VLFNRQPSLH++SIM H AKV P RTFR Sbjct: 207 FKKYLAYGNREKVAQELKCGDIVERHLCDNDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 266 Query: 543 FNECVC 560 FNEC C Sbjct: 267 FNECAC 272 [91][TOP] >UniRef100_B9PZ91 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii GT1 RepID=B9PZ91_TOXGO Length = 1747 Score = 226 bits (577), Expect = 7e-58 Identities = 115/187 (61%), Positives = 146/187 (78%), Gaps = 3/187 (1%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLAST---AKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 WE+LQ++ R +N+DA + L ++ +KP RGI QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 382 WEFLQLQCTRLINADAPAVSQLLASKNISKPGRGICQRLKGKEGRFRGNLSGKRVDFSGR 441 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPN V +V +P VA+ LT+PERV + N + L AAV++G +PGA +V DG Sbjct: 442 TVISPDPNANVYEVVVPEWVAKRLTFPERVNRVNIEVLRAAVLKGCSDWPGACYVNKVDG 501 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 +K LRY NR++VA++L +G VVERHL +GDVVLFNRQPSLHR+SIM+H A+V+P RTFR Sbjct: 502 SKCSLRYANRRQVAENLQIGDVVERHLCNGDVVLFNRQPSLHRMSIMAHRARVMPWRTFR 561 Query: 543 FNECVCA 563 FNECVC+ Sbjct: 562 FNECVCS 568 [92][TOP] >UniRef100_B6KRB8 DNA-directed RNA polymerase n=2 Tax=Toxoplasma gondii RepID=B6KRB8_TOXGO Length = 1746 Score = 226 bits (577), Expect = 7e-58 Identities = 115/187 (61%), Positives = 146/187 (78%), Gaps = 3/187 (1%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLAST---AKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 WE+LQ++ R +N+DA + L ++ +KP RGI QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 381 WEFLQLQCTRLINADAPAVSQLLASKNISKPGRGICQRLKGKEGRFRGNLSGKRVDFSGR 440 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPN V +V +P VA+ LT+PERV + N + L AAV++G +PGA +V DG Sbjct: 441 TVISPDPNANVYEVVVPEWVAKRLTFPERVNRVNIEVLRAAVLKGCSDWPGACYVNKVDG 500 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 +K LRY NR++VA++L +G VVERHL +GDVVLFNRQPSLHR+SIM+H A+V+P RTFR Sbjct: 501 SKCSLRYANRRQVAENLQIGDVVERHLCNGDVVLFNRQPSLHRMSIMAHRARVMPWRTFR 560 Query: 543 FNECVCA 563 FNECVC+ Sbjct: 561 FNECVCS 567 [93][TOP] >UniRef100_UPI000023CDC4 hypothetical protein FG09860.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023CDC4 Length = 2443 Score = 225 bits (573), Expect = 2e-57 Identities = 114/188 (60%), Positives = 136/188 (72%), Gaps = 2/188 (1%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ WE+LQ + A ++NSD L K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 1312 MEQWEYLQTQIAMYVNSDVPGLQQ-PGFGKTTRGFCQRLKGKQGRFRGNLSGKRVDFSGR 1370 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDD- 359 TVISPDPNL +DQV +P VA+ LTYPERV +HN ++L V GPD +PGA V D Sbjct: 1371 TVISPDPNLGIDQVAVPELVAKNLTYPERVQRHNIEKLRQCVKNGPDVWPGAQRVIKSDE 1430 Query: 360 -GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536 G + L++GNR+ +A+DL G +VERHL D D+VLFNRQPSLH++SIMSH AKV P RT Sbjct: 1431 GGYLQSLKFGNREYIARDLKFGDIVERHLEDNDIVLFNRQPSLHKLSIMSHLAKVRPWRT 1490 Query: 537 FRFNECVC 560 FR NECVC Sbjct: 1491 FRLNECVC 1498 [94][TOP] >UniRef100_C4JWU1 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704 RepID=C4JWU1_UNCRE Length = 1435 Score = 225 bits (573), Expect = 2e-57 Identities = 110/184 (59%), Positives = 138/184 (75%), Gaps = 1/184 (0%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 W+++Q++ A ++NSD L A KP+RGI QRLKGK GRFRGNLSGKRVDFSGRTVI Sbjct: 325 WDYMQLQIAVYINSDVPGLQK-ADFGKPIRGICQRLKGKQGRFRGNLSGKRVDFSGRTVI 383 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368 SPDPNLR+D+V +P VA +TYPERVT++N+++L + G +PGAN++ K Sbjct: 384 SPDPNLRIDEVAVPQLVAMNMTYPERVTRYNKEKLRERIRNGTKVWPGANYLSKRGTTFK 443 Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 FL+YGN + +A L G VVERHL DGD+VLFNRQPSLH++SI+SH KV PHRTFR N Sbjct: 444 VFLKYGNLRLMADQLEEGDVVERHLEDGDIVLFNRQPSLHKLSILSHFVKVRPHRTFRLN 503 Query: 549 ECVC 560 ECVC Sbjct: 504 ECVC 507 [95][TOP] >UniRef100_Q29CI9 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura pseudoobscura RepID=Q29CI9_DROPS Length = 644 Score = 224 bits (572), Expect = 3e-57 Identities = 109/186 (58%), Positives = 139/186 (74%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 + W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFR NLSGKRVDFSGRT Sbjct: 307 EDWDFLQLHVALYFHSEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRT 366 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365 VISPDPNL ++QVG+P+RVA+ LTYPERV N + + V GP +PGAN+V+ + Sbjct: 367 VISPDPNLMINQVGVPVRVAKILTYPERVNLANIRHMKHLVRNGPGKHPGANYVQQRGSS 426 Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K++L YGNR+KVA++L G +VERHL D D+VLFNRQPSLH++SIM H AKV P RTFR Sbjct: 427 FKKYLAYGNREKVAQELKCGDIVERHLCDNDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 486 Query: 543 FNECVC 560 FNEC C Sbjct: 487 FNECAC 492 [96][TOP] >UniRef100_Q0CS43 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624 RepID=Q0CS43_ASPTN Length = 1450 Score = 224 bits (572), Expect = 3e-57 Identities = 110/187 (58%), Positives = 140/187 (74%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 322 MECWDYMQLQIAVYINSDVPGLNK-ADLGKPIRGFVQRLKGKQGRFRGNLSGKRVDFSGR 380 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLRVD+V +P VA+ +TYPE VT++N+++L V G +PGAN++ Sbjct: 381 TVISPDPNLRVDEVAVPELVAKNMTYPEVVTRYNKEKLQQRVRNGTKKWPGANYLMKKGA 440 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 + K FL+YGN +A + G VVERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTF Sbjct: 441 DYKTFLKYGNLNMIADQIQEGDVVERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTF 500 Query: 540 RFNECVC 560 R NECVC Sbjct: 501 RLNECVC 507 [97][TOP] >UniRef100_A2QU24 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88 RepID=A2QU24_ASPNC Length = 1450 Score = 224 bits (572), Expect = 3e-57 Identities = 110/187 (58%), Positives = 140/187 (74%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 322 MECWDYMQLQIAVYINSDVPGLNK-ADLGKPIRGFVQRLKGKQGRFRGNLSGKRVDFSGR 380 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV-ETDD 359 TVISPDPNLRVD+V +P VA+ +TYPE VT++N+++L V G +PGAN++ + Sbjct: 381 TVISPDPNLRVDEVAVPELVAKNMTYPEVVTRYNKEKLQQRVRNGTKKWPGANYIMKKGQ 440 Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 K FL+YGN +A L G V+ERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTF Sbjct: 441 TFKLFLKYGNLNMIADQLQEGDVIERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTF 500 Query: 540 RFNECVC 560 R NECVC Sbjct: 501 RLNECVC 507 [98][TOP] >UniRef100_Q1DVM7 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis RepID=Q1DVM7_COCIM Length = 1430 Score = 224 bits (571), Expect = 3e-57 Identities = 111/184 (60%), Positives = 137/184 (74%), Gaps = 1/184 (0%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 W+++Q++ A ++NSD L A KP+RGI QRLKGK GRFRGNLSGKRVDFSGRTVI Sbjct: 325 WDYMQLQIAVYINSDVPGLQK-ADFGKPIRGICQRLKGKQGRFRGNLSGKRVDFSGRTVI 383 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368 SPDPNLR+D+V +P VA +TYPERVT++N+++L V G +PGAN++ K Sbjct: 384 SPDPNLRIDEVAVPQLVAMNMTYPERVTRYNKEKLRERVRNGTKIWPGANYLSKRGTTFK 443 Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 FL+YGN +A L G VVERHL DGD+VLFNRQPSLH++SI+SH KV PHRTFR N Sbjct: 444 VFLKYGNLNLMADQLEEGDVVERHLEDGDIVLFNRQPSLHKLSILSHFVKVRPHRTFRLN 503 Query: 549 ECVC 560 ECVC Sbjct: 504 ECVC 507 [99][TOP] >UniRef100_C5PCH6 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735 delta SOWgp RepID=C5PCH6_COCP7 Length = 1444 Score = 224 bits (571), Expect = 3e-57 Identities = 111/184 (60%), Positives = 137/184 (74%), Gaps = 1/184 (0%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 W+++Q++ A ++NSD L A KP+RGI QRLKGK GRFRGNLSGKRVDFSGRTVI Sbjct: 325 WDYMQLQIAVYINSDVPGLQK-ADFGKPIRGICQRLKGKQGRFRGNLSGKRVDFSGRTVI 383 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368 SPDPNLR+D+V +P VA +TYPERVT++N+++L V G +PGAN++ K Sbjct: 384 SPDPNLRIDEVAVPQLVAMNMTYPERVTRYNKEKLRERVRNGTKIWPGANYLSKRGTTFK 443 Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 FL+YGN +A L G VVERHL DGD+VLFNRQPSLH++SI+SH KV PHRTFR N Sbjct: 444 VFLKYGNLNLMADQLEEGDVVERHLEDGDIVLFNRQPSLHKLSILSHFVKVRPHRTFRLN 503 Query: 549 ECVC 560 ECVC Sbjct: 504 ECVC 507 [100][TOP] >UniRef100_C5FEK3 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480 RepID=C5FEK3_NANOT Length = 1443 Score = 224 bits (571), Expect = 3e-57 Identities = 109/186 (58%), Positives = 142/186 (76%), Gaps = 3/186 (1%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLAST--AKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 W+++Q++ A ++NSD +P L +T K +RG+ QRLKGK GRFRGNLSGKRVDFSGRT Sbjct: 324 WDYMQLQIAVYINSD---IPGLQNTDSKKSIRGLCQRLKGKQGRFRGNLSGKRVDFSGRT 380 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDDG 362 VISPDPNLR+D+V +P VA +TYPERVT++N+++L V G T+PGAN+ ++ + Sbjct: 381 VISPDPNLRIDEVAVPQLVAMNMTYPERVTRYNKEKLRQCVRNGTKTWPGANYLIKQGNS 440 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + FL+YGN +A L G +VERHL DGD+VLFNRQPSLH++SI+SH KV PHRTFR Sbjct: 441 FRLFLKYGNLNMIANQLSEGDIVERHLEDGDIVLFNRQPSLHKLSILSHFVKVRPHRTFR 500 Query: 543 FNECVC 560 NECVC Sbjct: 501 LNECVC 506 [101][TOP] >UniRef100_B6H2R1 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6H2R1_PENCW Length = 1448 Score = 224 bits (571), Expect = 3e-57 Identities = 108/187 (57%), Positives = 142/187 (75%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 322 MECWDYMQLQIAVYINSDVPGLNK-ADLGKPIRGFVQRLKGKQGRFRGNLSGKRVDFSGR 380 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGAN-FVETDD 359 TVISPDPNLRVD+V +P VA+ +TYPE VT++N+++L + G + +PGAN V+ Sbjct: 381 TVISPDPNLRVDEVAVPELVAKNMTYPELVTRYNKEKLQQRICNGSNKWPGANLIVKKGT 440 Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 G ++ L+Y N +++A L G +VERHL DGD+VLFNRQPSLH++SI+SH AK+ PHRTF Sbjct: 441 GFRQMLKYSNTQRMADQLQEGDLVERHLEDGDIVLFNRQPSLHKLSILSHFAKIRPHRTF 500 Query: 540 RFNECVC 560 R NECVC Sbjct: 501 RLNECVC 507 [102][TOP] >UniRef100_B6AIF4 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66 RepID=B6AIF4_9CRYT Length = 1803 Score = 224 bits (570), Expect = 5e-57 Identities = 111/190 (58%), Positives = 142/190 (74%), Gaps = 3/190 (1%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTA---KPLRGISQRLKGKTGRFRGNLSGKRVDF 173 + WE+LQ++ R +N++A + L ++ K RGI QRLKGK GRFRGNLSGKRVDF Sbjct: 301 LGNWEFLQLQCTRLINAEAPGVNQLLASKNIPKAGRGICQRLKGKEGRFRGNLSGKRVDF 360 Query: 174 SGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVET 353 SGRTVISPDPN+ VD+V +P+ +AR +TYPERV HN +RL AV+ G + +PGA +V Sbjct: 361 SGRTVISPDPNVAVDEVVVPVVIARIMTYPERVNSHNIERLRDAVLNGHNIWPGACYVYK 420 Query: 354 DDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHR 533 +G+K LRY NR+ V++ L +G VVERH++ GD VLFNRQPSLHR+SIMSH V+P R Sbjct: 421 TNGSKSSLRYANRRIVSERLEIGDVVERHMITGDSVLFNRQPSLHRLSIMSHRVVVMPWR 480 Query: 534 TFRFNECVCA 563 TFRFNEC CA Sbjct: 481 TFRFNECACA 490 [103][TOP] >UniRef100_Q2U3T5 DNA-directed RNA polymerase n=1 Tax=Aspergillus oryzae RepID=Q2U3T5_ASPOR Length = 1447 Score = 224 bits (570), Expect = 5e-57 Identities = 111/187 (59%), Positives = 140/187 (74%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 322 MECWDYMQLQIAVYINSDVPGLNK-ADLGKPIRGFVQRLKGKQGRFRGNLSGKRVDFSGR 380 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDD 359 TVISPDPNLRVD+V +P VA+ +TYPE VT++N+++L V G +PGAN+ V+ Sbjct: 381 TVISPDPNLRVDEVAVPELVAKNMTYPEVVTRYNKEKLQQRVRNGTKKWPGANYLVKKGS 440 Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 K FL+YG+ +A L G VVERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTF Sbjct: 441 TFKTFLKYGSLNMIADQLQEGDVVERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTF 500 Query: 540 RFNECVC 560 R NECVC Sbjct: 501 RLNECVC 507 [104][TOP] >UniRef100_C5JRK1 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis SLH14081 RepID=C5JRK1_AJEDS Length = 1456 Score = 224 bits (570), Expect = 5e-57 Identities = 109/184 (59%), Positives = 138/184 (75%), Gaps = 1/184 (0%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFS RTVI Sbjct: 325 WDYMQLQLAVYINSDVPGLQK-ADFGKPIRGFCQRLKGKQGRFRGNLSGKRVDFSARTVI 383 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368 SPDPNLRVD+V +P +A +TYPE+VT++N+++L + G T+PGAN+V N K Sbjct: 384 SPDPNLRVDEVAVPQLIAMNMTYPEQVTRYNKEKLRQRIRNGTKTWPGANYVFKKSQNFK 443 Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 L++GN VA DL G +VERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTFR N Sbjct: 444 MNLKFGNPNLVANDLEEGDIVERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTFRLN 503 Query: 549 ECVC 560 ECVC Sbjct: 504 ECVC 507 [105][TOP] >UniRef100_C5GRI8 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3 RepID=C5GRI8_AJEDR Length = 1456 Score = 224 bits (570), Expect = 5e-57 Identities = 109/184 (59%), Positives = 138/184 (75%), Gaps = 1/184 (0%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFS RTVI Sbjct: 325 WDYMQLQLAVYINSDVPGLQK-ADFGKPIRGFCQRLKGKQGRFRGNLSGKRVDFSARTVI 383 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368 SPDPNLRVD+V +P +A +TYPE+VT++N+++L + G T+PGAN+V N K Sbjct: 384 SPDPNLRVDEVAVPQLIAMNMTYPEQVTRYNKEKLRQRIRNGTKTWPGANYVFKKSQNFK 443 Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 L++GN VA DL G +VERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTFR N Sbjct: 444 MNLKFGNPNLVANDLEEGDIVERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTFRLN 503 Query: 549 ECVC 560 ECVC Sbjct: 504 ECVC 507 [106][TOP] >UniRef100_B8NTG3 DNA-directed RNA polymerase n=1 Tax=Aspergillus flavus NRRL3357 RepID=B8NTG3_ASPFN Length = 1436 Score = 224 bits (570), Expect = 5e-57 Identities = 111/187 (59%), Positives = 140/187 (74%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 322 MECWDYMQLQIAVYINSDVPGLNK-ADLGKPIRGFVQRLKGKQGRFRGNLSGKRVDFSGR 380 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDD 359 TVISPDPNLRVD+V +P VA+ +TYPE VT++N+++L V G +PGAN+ V+ Sbjct: 381 TVISPDPNLRVDEVAVPELVAKNMTYPEVVTRYNKEKLQQRVRNGTKKWPGANYLVKKGS 440 Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 K FL+YG+ +A L G VVERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTF Sbjct: 441 TFKTFLKYGSLNMIADQLQEGDVVERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTF 500 Query: 540 RFNECVC 560 R NECVC Sbjct: 501 RLNECVC 507 [107][TOP] >UniRef100_A1CLD8 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus RepID=A1CLD8_ASPCL Length = 1449 Score = 223 bits (569), Expect = 6e-57 Identities = 109/187 (58%), Positives = 140/187 (74%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 322 MECWDYMQLQIAVYINSDVPGLNK-ADLGKPIRGFVQRLKGKQGRFRGNLSGKRVDFSGR 380 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDD 359 TVISPDPNLRVD+V +P VA+ +TYPE V+++N+++L V G +PGAN+ ++ Sbjct: 381 TVISPDPNLRVDEVAVPELVAKNMTYPEVVSRYNKEKLQQRVRNGTKKWPGANYIIKKGS 440 Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 K FL+YGN +A L G V+ERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTF Sbjct: 441 DFKLFLKYGNLNMIADQLQEGDVIERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTF 500 Query: 540 RFNECVC 560 R NECVC Sbjct: 501 RLNECVC 507 [108][TOP] >UniRef100_B9FFW1 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=B9FFW1_ORYSJ Length = 1321 Score = 223 bits (568), Expect = 8e-57 Identities = 108/185 (58%), Positives = 138/185 (74%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 D W+ LQ++ ++NSDA +LP RG+ QRLKGKTGRFRGNLSGKR +++GRT Sbjct: 303 DCWQHLQLQVVEYINSDAPSLPESQH-----RGLVQRLKGKTGRFRGNLSGKRTEYTGRT 357 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365 VISPDPNLR+ +V IP+ +AR LTYPERV+ +N ++L + GP +PGANF+ DG Sbjct: 358 VISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANFIIQPDGT 417 Query: 366 KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545 K L+Y +R+ A+DL G VVERHL DGD+VLFNRQPSLHR+SIMSH A+++P RT RF Sbjct: 418 KLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRF 477 Query: 546 NECVC 560 NE VC Sbjct: 478 NESVC 482 [109][TOP] >UniRef100_Q7X881 DNA-directed RNA polymerase n=3 Tax=Oryza sativa RepID=Q7X881_ORYSJ Length = 1383 Score = 223 bits (568), Expect = 8e-57 Identities = 108/185 (58%), Positives = 138/185 (74%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 D W+ LQ++ ++NSDA +LP RG+ QRLKGKTGRFRGNLSGKR +++GRT Sbjct: 302 DCWQHLQLQVVEYINSDAPSLPESQH-----RGLVQRLKGKTGRFRGNLSGKRTEYTGRT 356 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365 VISPDPNLR+ +V IP+ +AR LTYPERV+ +N ++L + GP +PGANF+ DG Sbjct: 357 VISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANFIIQPDGT 416 Query: 366 KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545 K L+Y +R+ A+DL G VVERHL DGD+VLFNRQPSLHR+SIMSH A+++P RT RF Sbjct: 417 KLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRF 476 Query: 546 NECVC 560 NE VC Sbjct: 477 NESVC 481 [110][TOP] >UniRef100_C8VPJ2 Putative uncharacterized protein n=2 Tax=Emericella nidulans RepID=C8VPJ2_EMENI Length = 1445 Score = 223 bits (568), Expect = 8e-57 Identities = 111/188 (59%), Positives = 140/188 (74%), Gaps = 2/188 (1%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 322 MECWDYMQLQIAVYINSDVPGLNK-ADLGKPIRGFVQRLKGKQGRFRGNLSGKRVDFSGR 380 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLRVD+V +P VA+ +TYPE V ++N+++L V G +PGAN++ G Sbjct: 381 TVISPDPNLRVDEVAVPELVAKNMTYPEVVNRYNKEKLQQCVRNGQKKWPGANYI-IKKG 439 Query: 363 N--KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536 N K L+YGN K +A L G +VERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRT Sbjct: 440 NPLKTMLKYGNLKFIADQLQEGDIVERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRT 499 Query: 537 FRFNECVC 560 FR NECVC Sbjct: 500 FRLNECVC 507 [111][TOP] >UniRef100_C6HPI8 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HPI8_AJECH Length = 1333 Score = 223 bits (568), Expect = 8e-57 Identities = 109/184 (59%), Positives = 139/184 (75%), Gaps = 1/184 (0%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGRTVI Sbjct: 292 WDYMQLQLAVYINSDVPGLQK-ADFGKPIRGFCQRLKGKQGRFRGNLSGKRVDFSGRTVI 350 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368 SPDPNLRV++V +P VA +TYPE+VT++N+++L + G T+PGAN+V N K Sbjct: 351 SPDPNLRVNEVAVPQLVAMNMTYPEQVTRYNKEKLRQRIRNGTKTWPGANYVLKKSQNFK 410 Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 L++GN VA +L G +VERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTFR N Sbjct: 411 MNLKFGNPNLVANELEEGDIVERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTFRLN 470 Query: 549 ECVC 560 ECVC Sbjct: 471 ECVC 474 [112][TOP] >UniRef100_C0NZL8 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR RepID=C0NZL8_AJECG Length = 1456 Score = 223 bits (568), Expect = 8e-57 Identities = 109/184 (59%), Positives = 139/184 (75%), Gaps = 1/184 (0%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGRTVI Sbjct: 325 WDYMQLQLAVYINSDVPGLQK-ADFGKPIRGFCQRLKGKQGRFRGNLSGKRVDFSGRTVI 383 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368 SPDPNLRV++V +P VA +TYPE+VT++N+++L + G T+PGAN+V N K Sbjct: 384 SPDPNLRVNEVAVPQLVAMNMTYPEQVTRYNKEKLRQRIRNGTKTWPGANYVLKKSQNFK 443 Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 L++GN VA +L G +VERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTFR N Sbjct: 444 MNLKFGNPNLVANELEEGDIVERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTFRLN 503 Query: 549 ECVC 560 ECVC Sbjct: 504 ECVC 507 [113][TOP] >UniRef100_A6RGX8 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1 RepID=A6RGX8_AJECN Length = 1439 Score = 223 bits (568), Expect = 8e-57 Identities = 109/184 (59%), Positives = 139/184 (75%), Gaps = 1/184 (0%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGRTVI Sbjct: 325 WDYMQLQLAVYINSDVPGLQK-ADFGKPIRGFCQRLKGKQGRFRGNLSGKRVDFSGRTVI 383 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368 SPDPNLRV++V +P VA +TYPE+VT++N+++L + G T+PGAN+V N K Sbjct: 384 SPDPNLRVNEVAVPQLVAMNMTYPEQVTRYNKEKLRQRIRNGTKTWPGANYVLKKSQNFK 443 Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 L++GN VA +L G +VERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTFR N Sbjct: 444 MNLKFGNPNLVANELEEGDIVERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTFRLN 503 Query: 549 ECVC 560 ECVC Sbjct: 504 ECVC 507 [114][TOP] >UniRef100_C9SQ00 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SQ00_9PEZI Length = 1456 Score = 223 bits (567), Expect = 1e-56 Identities = 114/188 (60%), Positives = 137/188 (72%), Gaps = 2/188 (1%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ WE+LQ++ A ++NSD L K +RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 317 MEQWEYLQLQIAMYVNSDVPGLQQ-PGFGKTVRGFCQRLKGKQGRFRGNLSGKRVDFSGR 375 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDD- 359 TVISPDPNL + QV IP+ VA+ LTYPERV ++ K+L V GPD +PGA V D Sbjct: 376 TVISPDPNLGITQVAIPILVAKNLTYPERVNDYSLKKLRKCVQNGPDVWPGAQQVIKSDE 435 Query: 360 -GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536 G K L++GNR +VA+DL +G VVERH+ D D+VLFNRQPSLH++SIMSH KV P RT Sbjct: 436 GGYKISLKFGNRGQVARDLKVGDVVERHIEDNDIVLFNRQPSLHKLSIMSHLVKVRPWRT 495 Query: 537 FRFNECVC 560 FR NECVC Sbjct: 496 FRLNECVC 503 [115][TOP] >UniRef100_B0XZZ0 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus RepID=B0XZZ0_ASPFC Length = 1453 Score = 223 bits (567), Expect = 1e-56 Identities = 108/184 (58%), Positives = 138/184 (75%), Gaps = 1/184 (0%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGRTVI Sbjct: 325 WDYMQLQIAVYINSDVPGLNK-ADLGKPIRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVI 383 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDDGNK 368 SPDPNLRVD+V +P VA+ +TYPE VT++N+++L V G +PGAN+ ++ K Sbjct: 384 SPDPNLRVDEVAVPELVAKNMTYPEVVTRYNKEKLQQRVRNGTKKWPGANYIIKKGSDFK 443 Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 FL+YGN +A + G V+ERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTFR N Sbjct: 444 LFLKYGNLNMIADQIQEGDVIERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTFRLN 503 Query: 549 ECVC 560 ECVC Sbjct: 504 ECVC 507 [116][TOP] >UniRef100_A1D5Y9 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1D5Y9_NEOFI Length = 1453 Score = 223 bits (567), Expect = 1e-56 Identities = 108/184 (58%), Positives = 138/184 (75%), Gaps = 1/184 (0%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGRTVI Sbjct: 325 WDYMQLQIAVYINSDVPGLNK-ADLGKPIRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVI 383 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDDGNK 368 SPDPNLRVD+V +P VA+ +TYPE VT++N+++L V G +PGAN+ ++ K Sbjct: 384 SPDPNLRVDEVAVPELVAKNMTYPEVVTRYNKEKLQQRVRNGTKKWPGANYIIKKGSDFK 443 Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 FL+YGN +A + G V+ERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTFR N Sbjct: 444 LFLKYGNLNMIADQIQEGDVIERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTFRLN 503 Query: 549 ECVC 560 ECVC Sbjct: 504 ECVC 507 [117][TOP] >UniRef100_Q4P157 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis RepID=Q4P157_USTMA Length = 1400 Score = 221 bits (564), Expect = 2e-56 Identities = 111/185 (60%), Positives = 141/185 (76%), Gaps = 2/185 (1%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 WE+LQ+ A ++NS+ +P KP RG QRLKGK GRFRGNLSGKRVDFSGRTVI Sbjct: 309 WEFLQLTVALYINSELPGVPTQPGQ-KPSRGFCQRLKGKQGRFRGNLSGKRVDFSGRTVI 367 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDDGNK 368 PDPNL++D+V +P RVA+ LTYPERV +HN ++L AV G D +PGAN+ ++ G K Sbjct: 368 GPDPNLKIDEVAVPQRVAKILTYPERVFQHNIEQLRQAVRNGTDIHPGANYLMDGKTGFK 427 Query: 369 RFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545 RFL++ G R+++A+ L +G VVERH+ DGD+VLFNRQPSLH++SIMSH AK+ P RTFR Sbjct: 428 RFLKFPGMREELAEKLRVGDVVERHIRDGDIVLFNRQPSLHKLSIMSHRAKIRPWRTFRL 487 Query: 546 NECVC 560 NEC C Sbjct: 488 NECAC 492 [118][TOP] >UniRef100_Q5CWY0 DNA-directed RNA polymerase n=2 Tax=Cryptosporidium parvum RepID=Q5CWY0_CRYPV Length = 1871 Score = 221 bits (563), Expect = 3e-56 Identities = 109/190 (57%), Positives = 139/190 (73%), Gaps = 3/190 (1%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTA---KPLRGISQRLKGKTGRFRGNLSGKRVDF 173 + WE+LQ++ R +N+DA + L ++ K RG+ QRLKGK GRFRGNLSGKRVDF Sbjct: 300 LGNWEFLQLQCTRLINADAPGVNQLLASKNIPKAGRGVCQRLKGKEGRFRGNLSGKRVDF 359 Query: 174 SGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVET 353 SGRTVISPDPN+ VD+V +P+ +A+ LTYPERV N L AV+ G D +PGA +V Sbjct: 360 SGRTVISPDPNIEVDEVVVPMIIAKKLTYPERVNAINIDSLREAVLNGHDIWPGACYVYK 419 Query: 354 DDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHR 533 +G+K LRY NR+ V++ L +G +VERH+ GD+VLFNRQPSLHR+SIMSH V+P R Sbjct: 420 SNGSKSSLRYANRRVVSERLEIGDIVERHMKTGDIVLFNRQPSLHRLSIMSHKVVVMPWR 479 Query: 534 TFRFNECVCA 563 TFRFNEC CA Sbjct: 480 TFRFNECACA 489 [119][TOP] >UniRef100_Q5CK97 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium hominis RepID=Q5CK97_CRYHO Length = 1869 Score = 221 bits (563), Expect = 3e-56 Identities = 109/190 (57%), Positives = 139/190 (73%), Gaps = 3/190 (1%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTA---KPLRGISQRLKGKTGRFRGNLSGKRVDF 173 + WE+LQ++ R +N+DA + L ++ K RG+ QRLKGK GRFRGNLSGKRVDF Sbjct: 300 LGNWEFLQLQCTRLINADAPGVNQLLASKNIPKAGRGVCQRLKGKEGRFRGNLSGKRVDF 359 Query: 174 SGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVET 353 SGRTVISPDPN+ VD+V +P+ +A+ LTYPERV N L AV+ G D +PGA +V Sbjct: 360 SGRTVISPDPNIEVDEVVVPMIIAKKLTYPERVNAINIDSLREAVLNGHDIWPGACYVYK 419 Query: 354 DDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHR 533 +G+K LRY NR+ V++ L +G +VERH+ GD+VLFNRQPSLHR+SIMSH V+P R Sbjct: 420 SNGSKSSLRYANRRVVSERLEIGDIVERHMKTGDIVLFNRQPSLHRLSIMSHKVVVMPWR 479 Query: 534 TFRFNECVCA 563 TFRFNEC CA Sbjct: 480 TFRFNECACA 489 [120][TOP] >UniRef100_C1GGI7 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb18 RepID=C1GGI7_PARBD Length = 1458 Score = 221 bits (563), Expect = 3e-56 Identities = 107/184 (58%), Positives = 137/184 (74%), Gaps = 1/184 (0%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 W+ +Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFS RTVI Sbjct: 325 WDHMQLQLAVYINSDVPGLQK-ADFGKPIRGFCQRLKGKQGRFRGNLSGKRVDFSSRTVI 383 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368 SPDPNLR+D+V +P+ VA +TYPE+VT++N+++L V G T+PGAN+V N K Sbjct: 384 SPDPNLRIDEVAVPILVAMNMTYPEQVTRYNKEKLRQCVRNGTKTWPGANYVLKKSQNFK 443 Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 L++GN +A +L G +VERH+ DGD+VLFNRQPSLH++SI+SH KV PHRTFR N Sbjct: 444 MNLKFGNPNLIANELEEGDIVERHIEDGDIVLFNRQPSLHKLSILSHFVKVRPHRTFRLN 503 Query: 549 ECVC 560 ECVC Sbjct: 504 ECVC 507 [121][TOP] >UniRef100_C0SHD3 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SHD3_PARBP Length = 1449 Score = 221 bits (563), Expect = 3e-56 Identities = 107/184 (58%), Positives = 137/184 (74%), Gaps = 1/184 (0%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 W+ +Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFS RTVI Sbjct: 316 WDHMQLQLAVYINSDVPGLQK-ADFGKPIRGFCQRLKGKQGRFRGNLSGKRVDFSSRTVI 374 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368 SPDPNLR+D+V +P+ VA +TYPE+VT++N+++L V G T+PGAN+V N K Sbjct: 375 SPDPNLRIDEVAVPILVAMNMTYPEQVTRYNKEKLRQCVRNGTKTWPGANYVLKKSQNFK 434 Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 L++GN +A +L G +VERH+ DGD+VLFNRQPSLH++SI+SH KV PHRTFR N Sbjct: 435 MNLKFGNPNLIANELEEGDIVERHIEDGDIVLFNRQPSLHKLSILSHFVKVRPHRTFRLN 494 Query: 549 ECVC 560 ECVC Sbjct: 495 ECVC 498 [122][TOP] >UniRef100_A7EYX3 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7EYX3_SCLS1 Length = 1459 Score = 221 bits (562), Expect = 4e-56 Identities = 110/187 (58%), Positives = 137/187 (73%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NSD L K +RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 318 MEQWDFLQLQIAMYVNSDVPGLQQ-PGFGKAIRGFCQRLKGKQGRFRGNLSGKRVDFSGR 376 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA-NFVETDD 359 TVISPDPNL +D+V +P+ VA+ LTYPERV + N ++L VI GP+ +PGA V+ D Sbjct: 377 TVISPDPNLGIDEVAVPILVAKNLTYPERVQRQNIEKLRKCVINGPNVHPGAQQIVKKDS 436 Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 +K L++ R AK L +G VVERHL DGD+VLFNRQPSLH++SIMSH AK+ P RTF Sbjct: 437 NHKISLKFAKRDNEAKFLKIGDVVERHLEDGDIVLFNRQPSLHKLSIMSHYAKIRPWRTF 496 Query: 540 RFNECVC 560 R NECVC Sbjct: 497 RLNECVC 503 [123][TOP] >UniRef100_C1GX38 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1GX38_PARBA Length = 1425 Score = 220 bits (561), Expect = 5e-56 Identities = 107/184 (58%), Positives = 136/184 (73%), Gaps = 1/184 (0%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 W+ +Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFS RTVI Sbjct: 293 WDHMQLQLAVYINSDVPGLQK-ADFGKPIRGFCQRLKGKQGRFRGNLSGKRVDFSSRTVI 351 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368 SPDPNLR+D+V +P+ VA +TYPE+VT++N+ +L V G T+PGAN+V N K Sbjct: 352 SPDPNLRIDEVAVPILVAMNMTYPEQVTRYNKDKLRQCVRNGTKTWPGANYVLKKSQNFK 411 Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 L++GN +A +L G +VERH+ DGD+VLFNRQPSLH++SI+SH KV PHRTFR N Sbjct: 412 MNLKFGNPNLIANELEEGDIVERHIEDGDIVLFNRQPSLHKLSILSHFVKVRPHRTFRLN 471 Query: 549 ECVC 560 ECVC Sbjct: 472 ECVC 475 [124][TOP] >UniRef100_A6SCV1 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6SCV1_BOTFB Length = 1468 Score = 220 bits (561), Expect = 5e-56 Identities = 109/187 (58%), Positives = 137/187 (73%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NSD L K +RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 315 MEQWDFLQLQIAMYVNSDVPGLQQ-PGFGKAIRGFCQRLKGKQGRFRGNLSGKRVDFSGR 373 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA-NFVETDD 359 TVISPDPNL +D+V +P+ VA+ LTYPERV + N ++L VI GP+ +PGA ++ D Sbjct: 374 TVISPDPNLGIDEVAVPILVAKNLTYPERVQRQNIEKLRQCVINGPNVHPGAQQIIKKDS 433 Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 +K L++ R AK L +G VVERHL DGD+VLFNRQPSLH++SIMSH AK+ P RTF Sbjct: 434 NHKISLKFAKRDNEAKFLKIGDVVERHLEDGDIVLFNRQPSLHKLSIMSHYAKIRPWRTF 493 Query: 540 RFNECVC 560 R NECVC Sbjct: 494 RLNECVC 500 [125][TOP] >UniRef100_B9T0Q9 DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9T0Q9_RICCO Length = 1383 Score = 219 bits (558), Expect = 1e-55 Identities = 107/186 (57%), Positives = 134/186 (72%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 +D W+ LQ A +MNSD +P KPL G QRLKGK GRFRGNLSGKRV+F+GR Sbjct: 280 LDSWDGLQAAVALYMNSDV-RVPNNVEVGKPLSGFVQRLKGKQGRFRGNLSGKRVEFTGR 338 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNL++ +V IP+ +AR L+YPERV+ HN ++L V GP YPGA+ V DG Sbjct: 339 TVISPDPNLKITEVAIPIHMARILSYPERVSHHNIEKLRQLVSNGPQKYPGASTVRYPDG 398 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + + L RK +A++L G +V+RHL DGDVVLFNRQPSLHR+SIM H A+++P RT R Sbjct: 399 SSKRLIGSYRKTIAEELTFGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLR 458 Query: 543 FNECVC 560 FNE VC Sbjct: 459 FNESVC 464 [126][TOP] >UniRef100_A9RSV5 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSV5_PHYPA Length = 1397 Score = 219 bits (557), Expect = 1e-55 Identities = 106/188 (56%), Positives = 143/188 (76%), Gaps = 2/188 (1%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLP--PLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFS 176 M+ WE LQ + ++ +NS+ T +P ++ K RG QRLKGK GRFRGNLSGKRVDF+ Sbjct: 314 METWELLQSQVSQLINSE-TPVPRSEQPTSGKQPRGFVQRLKGKQGRFRGNLSGKRVDFT 372 Query: 177 GRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETD 356 GRTVISPDPNL++ +V +PL +A+ LTYPE+V+++N +L +I G +PGANF+ Sbjct: 373 GRTVISPDPNLKITEVAVPLLMAQLLTYPEKVSRYNIDKLRGRIINGMTKHPGANFIIFP 432 Query: 357 DGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536 DGNK +L++G+R++ A +L G +VERHL DGD+VLFNRQPSLHR+SIMSH A+++P RT Sbjct: 433 DGNKLYLKFGDRRRYAAELKYGDIVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 492 Query: 537 FRFNECVC 560 RFNE VC Sbjct: 493 LRFNESVC 500 [127][TOP] >UniRef100_B0EG66 DNA-directed RNA polymerase n=1 Tax=Entamoeba dispar SAW760 RepID=B0EG66_ENTDI Length = 1379 Score = 219 bits (557), Expect = 1e-55 Identities = 113/188 (60%), Positives = 134/188 (71%), Gaps = 3/188 (1%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 D W+ L + + F+NSD LP KPLR I QRLKGK GRFRGNL GKRVDFSGRT Sbjct: 325 DSWDQLTIAVSMFINSD---LPGCDDKGKPLRSICQRLKGKHGRFRGNLLGKRVDFSGRT 381 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGAN-FVETDDG 362 VISPDPNL ++Q+G+P +A LTYPERVTKHN +L VI G + YPG N + DG Sbjct: 382 VISPDPNLDIEQIGVPKLMAIKLTYPERVTKHNIDKLRQLVINGSNIYPGCNSIIGGTDG 441 Query: 363 NKR--FLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536 +R ++ R+K AKDL +G +VERHL D D+VLFNRQPSLHRISIM H AK++P RT Sbjct: 442 LRRSMCIKLEMREKFAKDLKIGDIVERHLEDNDIVLFNRQPSLHRISIMCHKAKILPWRT 501 Query: 537 FRFNECVC 560 RFNECVC Sbjct: 502 LRFNECVC 509 [128][TOP] >UniRef100_Q976A5 DNA-directed RNA polymerase n=1 Tax=Sulfolobus tokodaii RepID=Q976A5_SULTO Length = 884 Score = 218 bits (556), Expect = 2e-55 Identities = 107/187 (57%), Positives = 139/187 (74%), Gaps = 2/187 (1%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ + + +++ +PP + +PLR ++QRLKGK GRFRGNLSGKRVDFS R Sbjct: 268 DLWDLLQYHVSTYFDNEIPGIPPAKHRSGRPLRTLAQRLKGKEGRFRGNLSGKRVDFSAR 327 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPN+ +D+VG+P+ +A+TLT PERVTK N +R+ VI GP+ +PGAN+V DG Sbjct: 328 TVISPDPNISIDEVGVPVAIAKTLTVPERVTKMNIERMRQYVINGPEKWPGANYVIRPDG 387 Query: 363 NKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 + LRY +RK++A L G +VERHL+DGD+VLFNRQPSLHRIS+M H KV+P RTF Sbjct: 388 RRIDLRYVKDRKELASSLTPGYIVERHLIDGDIVLFNRQPSLHRISMMGHKVKVLPGRTF 447 Query: 540 RFNECVC 560 R N VC Sbjct: 448 RLNLLVC 454 [129][TOP] >UniRef100_C4M626 DNA-directed RNA polymerase n=1 Tax=Entamoeba histolytica HM-1:IMSS RepID=C4M626_ENTHI Length = 1379 Score = 218 bits (555), Expect = 3e-55 Identities = 113/188 (60%), Positives = 134/188 (71%), Gaps = 3/188 (1%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 D W+ L V + F+NS+ LP KPLR I QRLKGK GRFRGNL GKRVDFSGRT Sbjct: 325 DSWDQLTVAVSMFINSE---LPGCDDKGKPLRAICQRLKGKHGRFRGNLLGKRVDFSGRT 381 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGAN-FVETDDG 362 VISPDPNL ++Q+G+P +A LTYPERVTKHN +L VI G + YPG N + DG Sbjct: 382 VISPDPNLDIEQIGVPKLMAVKLTYPERVTKHNIDKLRQLVINGSNNYPGCNSIIGGSDG 441 Query: 363 NKR--FLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536 +R ++ R+K AKDL +G +VERHL D D+VLFNRQPSLHRISIM H AK++P RT Sbjct: 442 LRRSMCIKLEMREKFAKDLKIGDIVERHLEDNDIVLFNRQPSLHRISIMCHRAKILPWRT 501 Query: 537 FRFNECVC 560 RFNECVC Sbjct: 502 LRFNECVC 509 [130][TOP] >UniRef100_C7YT68 Putative uncharacterized protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7YT68_NECH7 Length = 1449 Score = 218 bits (554), Expect = 3e-55 Identities = 112/188 (59%), Positives = 133/188 (70%), Gaps = 2/188 (1%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ WE+LQ + A ++NSD L K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 319 MEQWEYLQTQIAMYVNSDVPGLQQ-PGFGKATRGFCQRLKGKQGRFRGNLSGKRVDFSGR 377 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA-NFVETDD 359 TVISPDPNL +DQV +P VA+ LTYPERV +HN ++L + G D +PGA V+ DD Sbjct: 378 TVISPDPNLGIDQVAVPELVAKNLTYPERVQRHNIEKLRQCIKNGVDVWPGAQRVVKQDD 437 Query: 360 GNKRF-LRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536 G L++ NR ++DL G VVERHL D D+VLFNRQPSLH++SIMSH AKV P RT Sbjct: 438 GGYSINLKFANRDNTSRDLKYGDVVERHLEDNDIVLFNRQPSLHKLSIMSHLAKVRPWRT 497 Query: 537 FRFNECVC 560 FR NECVC Sbjct: 498 FRLNECVC 505 [131][TOP] >UniRef100_Q8SRM3 DNA-directed RNA polymerase n=1 Tax=Encephalitozoon cuniculi RepID=Q8SRM3_ENCCU Length = 1349 Score = 216 bits (551), Expect = 7e-55 Identities = 111/185 (60%), Positives = 139/185 (75%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 + W+ LQ++ A +NS+ LP + +P+RGI QRLKGK GRFR NLSGKRVDFSGRT Sbjct: 320 EDWDHLQLQCALLINSE---LPQIGIPGQPVRGIVQRLKGKNGRFRCNLSGKRVDFSGRT 376 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365 VISPDPNL +++VGIP R+A+ LT ERVT+ NR++L A V+ GP+ YPGAN+V + Sbjct: 377 VISPDPNLSIEEVGIPERMAKILTISERVTRLNRRKLQALVLNGPENYPGANYV-VGEKF 435 Query: 366 KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545 KRFL YG R +L G VVERHL+DGD+VLFNRQPSLHR+SIMSH +V ++T RF Sbjct: 436 KRFLMYGKRD---IELKYGEVVERHLMDGDMVLFNRQPSLHRMSIMSHKVRVHRNKTLRF 492 Query: 546 NECVC 560 NECVC Sbjct: 493 NECVC 497 [132][TOP] >UniRef100_Q2GTS6 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum RepID=Q2GTS6_CHAGB Length = 1290 Score = 216 bits (551), Expect = 7e-55 Identities = 113/189 (59%), Positives = 135/189 (71%), Gaps = 3/189 (1%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ WE+LQ++ ++NSD L KP+RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 190 MEQWEFLQLQVGMYVNSDVPGLYQ-PGFGKPIRGFCQRLKGKQGRFRGNLSGKRVDFSGR 248 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNL ++QV +P VA+ LTYPERV N ++L VI GP+ +PGA + DG Sbjct: 249 TVISPDPNLSIEQVAVPELVAKNLTYPERVNHANIEKLRERVITGPNIWPGAQGIIKKDG 308 Query: 363 NKRFLRYGN---RKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHR 533 K L+ GN R+K A +L G VVERHL D DVVLFNRQPSLH++SIMSH AK+ P R Sbjct: 309 AKYNLKIGNESLREKHANNLEHGDVVERHLEDNDVVLFNRQPSLHKLSIMSHLAKIRPWR 368 Query: 534 TFRFNECVC 560 TFR NECVC Sbjct: 369 TFRLNECVC 377 [133][TOP] >UniRef100_P11512 DNA-directed RNA polymerase subunit A' n=1 Tax=Sulfolobus acidocaldarius RepID=RPOA1_SULAC Length = 880 Score = 216 bits (550), Expect = 1e-54 Identities = 110/187 (58%), Positives = 136/187 (72%), Gaps = 2/187 (1%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ A + +++ LPP + +PLR ++QRLKGK GRFRGNLSGKRVDFS R Sbjct: 264 DLWDLLQYHVATYFDNEIPGLPPAKHRSGRPLRTLAQRLKGKEGRFRGNLSGKRVDFSAR 323 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNL +D+VGIP +AR LT PERVT N +R+ +I GPD +PGAN+V DG Sbjct: 324 TVISPDPNLSIDEVGIPYTIARMLTVPERVTNINIERIRQYIINGPDKWPGANYVIKPDG 383 Query: 363 NKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 + LRY +RK++A + G VVERHLVDGDVVLFNRQPSLHRIS+M+H +V+P RTF Sbjct: 384 RRIDLRYVKDRKELASSITAGYVVERHLVDGDVVLFNRQPSLHRISMMAHKVRVLPGRTF 443 Query: 540 RFNECVC 560 R N C Sbjct: 444 RLNLLDC 450 [134][TOP] >UniRef100_C5KZ53 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KZ53_9ALVE Length = 1719 Score = 215 bits (548), Expect = 2e-54 Identities = 111/187 (59%), Positives = 133/187 (71%), Gaps = 3/187 (1%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 W+WL + A MNS+AT L A T KP+R I RLKGK GRFRGNLSGKRV+FSGRTVI Sbjct: 280 WQWLSAQVALMMNSEATGLAAAAPTTKPIRSICSRLKGKEGRFRGNLSGKRVNFSGRTVI 339 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG--- 362 SPDPNL V +V IP A LT+PE V + N L VIRG + +PGA+ + G Sbjct: 340 SPDPNLEVTEVIIPQYSAMKLTFPEVVCRTNIDMLRDRVIRGTEGHPGAHIIRLKSGGVK 399 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 N F++ R+++A DL G VVERHL DGDVVLFNRQPSLH++SIM+H AKV+P RTFR Sbjct: 400 NLAFIKKQIREELAADLQYGDVVERHLQDGDVVLFNRQPSLHKMSIMAHRAKVMPWRTFR 459 Query: 543 FNECVCA 563 FNECVC+ Sbjct: 460 FNECVCS 466 [135][TOP] >UniRef100_C5KF34 DNA-directed RNA polymerase (Fragment) n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KF34_9ALVE Length = 465 Score = 215 bits (548), Expect = 2e-54 Identities = 111/187 (59%), Positives = 133/187 (71%), Gaps = 3/187 (1%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 W+WL + A MNS+AT L A T KP+R I RLKGK GRFRGNLSGKRV+FSGRTVI Sbjct: 189 WQWLSAQVALMMNSEATGLAAAAPTTKPIRSICSRLKGKEGRFRGNLSGKRVNFSGRTVI 248 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG--- 362 SPDPNL V +V IP A LT+PE V + N L VIRG + +PGA+ + G Sbjct: 249 SPDPNLEVTEVIIPQYSAMKLTFPEVVCRTNIDMLRDRVIRGTEGHPGAHIIRLKSGGVK 308 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 N F++ R+++A DL G VVERHL DGDVVLFNRQPSLH++SIM+H AKV+P RTFR Sbjct: 309 NLAFIKKQIREELAADLQYGDVVERHLQDGDVVLFNRQPSLHKMSIMAHRAKVMPWRTFR 368 Query: 543 FNECVCA 563 FNECVC+ Sbjct: 369 FNECVCS 375 [136][TOP] >UniRef100_Q4U940 DNA-directed RNA polymerase n=1 Tax=Theileria annulata RepID=Q4U940_THEAN Length = 1648 Score = 214 bits (544), Expect = 5e-54 Identities = 106/186 (56%), Positives = 139/186 (74%), Gaps = 3/186 (1%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLAST---AKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 W+ +Q + RF+NSD+ L L + +KP RGI QRLKGK GRFRGNLSGKRVDFS R Sbjct: 365 WQIIQYQCTRFINSDSPALAQLLLSRRVSKPGRGIFQRLKGKEGRFRGNLSGKRVDFSAR 424 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPN+ +D+V +P +AR LT+PERVTK+N L A++ G +PGA++V DG Sbjct: 425 TVISPDPNVGIDEVVVPEWIARRLTFPERVTKYNIHVLKKAILNGVSVWPGASYVNKLDG 484 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 +K LR+ N K ++++L +G +VERHL +GD+V+FNRQPSLHR+SIM H A+V+ TFR Sbjct: 485 SKCSLRFANPKHMSENLQVGDIVERHLWNGDIVIFNRQPSLHRLSIMCHRARVMSGSTFR 544 Query: 543 FNECVC 560 FNECVC Sbjct: 545 FNECVC 550 [137][TOP] >UniRef100_Q4N1T2 DNA-directed RNA polymerase n=1 Tax=Theileria parva RepID=Q4N1T2_THEPA Length = 1617 Score = 213 bits (543), Expect = 6e-54 Identities = 106/186 (56%), Positives = 139/186 (74%), Gaps = 3/186 (1%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLAST---AKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 W+ +Q + RF+NSD+ L L + +KP RGI QRLKGK GRFRGNLSGKRVDFS R Sbjct: 357 WQIIQYQCTRFINSDSPALAQLLLSRRVSKPGRGIFQRLKGKEGRFRGNLSGKRVDFSAR 416 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPN+ +D+V +P +AR LT+PERVTK+N L A++ G +PGA++V DG Sbjct: 417 TVISPDPNVGIDEVVVPEWIARRLTFPERVTKYNIDVLKKAILNGVSVWPGASYVNKLDG 476 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 +K LR+ N K ++++L +G +VERHL +GD+V+FNRQPSLHR+SIM H A+V+ TFR Sbjct: 477 SKCSLRFANPKHMSENLQVGDIVERHLWNGDIVIFNRQPSLHRLSIMCHRARVMNGSTFR 536 Query: 543 FNECVC 560 FNECVC Sbjct: 537 FNECVC 542 [138][TOP] >UniRef100_Q8U0M4 DNA-directed RNA polymerase n=1 Tax=Pyrococcus furiosus RepID=Q8U0M4_PYRFU Length = 907 Score = 212 bits (539), Expect = 2e-53 Identities = 100/186 (53%), Positives = 137/186 (73%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ ++N++A +PP + +PL+ ++QRLKGK GRFRGNLSGKRV+FS R Sbjct: 267 DLWDLLQYHVTTYINNEAPGVPPAKHKSGRPLKTLAQRLKGKEGRFRGNLSGKRVNFSAR 326 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDP + +++VG+P+ VA LT PE+VT+ N +RL V+ GPD YPGAN+V +G Sbjct: 327 TVISPDPMISINEVGVPVEVAMELTVPEKVTEFNIERLRKMVLNGPDKYPGANYVIDPEG 386 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 +R + N++ +A L +G VERHL+DGD+VLFNRQPSLHR+SIM+H +V+P+RTFR Sbjct: 387 RRRRIMDSNKETLANQLDIGWTVERHLMDGDIVLFNRQPSLHRMSIMAHRVRVMPYRTFR 446 Query: 543 FNECVC 560 N VC Sbjct: 447 LNLAVC 452 [139][TOP] >UniRef100_UPI000069FEE9 DNA-directed RNA polymerase III largest subunit (EC 2.7.7.6) (RPC155) (RPC1). n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI000069FEE9 Length = 477 Score = 211 bits (536), Expect = 4e-53 Identities = 98/170 (57%), Positives = 133/170 (78%), Gaps = 1/170 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 306 MEDWDFLQLQCALYINSELSGIPMNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 365 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LT+PE+V + N + + V GPD +PGANF++ Sbjct: 366 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNQANMQLMRKLVQNGPDVHPGANFIQQRHT 425 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSH 509 KRFL+YGNR+K+A++L G +VERHL+DGD+VLFNRQPSLH++SIM+H Sbjct: 426 QMKRFLKYGNREKIAQELRFGDIVERHLIDGDIVLFNRQPSLHKLSIMAH 475 [140][TOP] >UniRef100_A9VCM2 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis RepID=A9VCM2_MONBE Length = 1414 Score = 211 bits (536), Expect = 4e-53 Identities = 107/187 (57%), Positives = 126/187 (67%), Gaps = 1/187 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M WE LQV A + N D LP K RG QRLKGK GRFRGNLSGKRV++SGR Sbjct: 292 MQTWEALQVHVALYFNGDLPGLPKDLKPKKAPRGFYQRLKGKQGRFRGNLSGKRVNYSGR 351 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPN +D+V +P V + LTYPE V +N +RL AAV GPD YPGA +E Sbjct: 352 TVISPDPNASIDEVCVPYHVCKILTYPEMVNDYNIQRLRAAVENGPDNYPGAVLLEKSRD 411 Query: 363 NKRF-LRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 + + L + NR+K A++L G +V RHL+DGD LFNRQPSLHR+SIM H K P RTF Sbjct: 412 KRTYDLAHCNRQKSARELAKGDIVRRHLIDGDYALFNRQPSLHRMSIMCHRVKARPWRTF 471 Query: 540 RFNECVC 560 RFNECVC Sbjct: 472 RFNECVC 478 [141][TOP] >UniRef100_B4IKC6 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia RepID=B4IKC6_DROSE Length = 1369 Score = 210 bits (535), Expect = 5e-53 Identities = 107/186 (57%), Positives = 132/186 (70%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 + W++LQ+ A + + RGI QRLKGK GRFR NLSGKRVDFSGRT Sbjct: 307 EDWDFLQLHVALYSTTT--------------RGIVQRLKGKQGRFRCNLSGKRVDFSGRT 352 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365 VISPDPNL ++QVG+P+RVA+ LTYPERV N + + V GP +PGAN+V+ + Sbjct: 353 VISPDPNLMINQVGVPVRVAKILTYPERVNPANIRHMRELVRNGPSMHPGANYVQQRGSS 412 Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K++L YGNR+KVA++L G VVERHL D D+VLFNRQPSLH++SIM H AKV P RTFR Sbjct: 413 FKKYLAYGNREKVAQELKCGDVVERHLRDEDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 472 Query: 543 FNECVC 560 FNEC C Sbjct: 473 FNECAC 478 [142][TOP] >UniRef100_C4V991 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01 RepID=C4V991_NOSCE Length = 1335 Score = 210 bits (535), Expect = 5e-53 Identities = 111/186 (59%), Positives = 137/186 (73%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 D WE LQ++ A +NSD LP + ++P++GI QRLKGK+GRFR NLSGKRVDFSGRT Sbjct: 311 DDWESLQLQCALMVNSD---LPQINVQSQPIKGIVQRLKGKSGRFRCNLSGKRVDFSGRT 367 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365 VISP+PNL +DQV +P +A+ LT PE+VTK N+ RL V GP +YPGAN+V Sbjct: 368 VISPNPNLSIDQVDVPEFMAKILTIPEKVTKFNKSRLQNLVKNGPKSYPGANYV-IGSKY 426 Query: 366 KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545 K+FL YG R ++L G VVERHLV+GDVVLFNRQPSLHR+SIMSH + ++T RF Sbjct: 427 KKFLLYGGRD---EELNEGDVVERHLVNGDVVLFNRQPSLHRMSIMSHFVNIHKNKTLRF 483 Query: 546 NECVCA 563 NECVCA Sbjct: 484 NECVCA 489 [143][TOP] >UniRef100_Q7ZXW5 DNA-directed RNA polymerase n=1 Tax=Xenopus laevis RepID=Q7ZXW5_XENLA Length = 489 Score = 209 bits (533), Expect = 9e-53 Identities = 98/173 (56%), Positives = 134/173 (77%), Gaps = 1/173 (0%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 306 MEDWDFLQLQCALYINSELSGIPMNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 365 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNLR+D+V +P+ VA+ LT+PE+V + N + + V GP+ +PGANF++ Sbjct: 366 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNQANMQLMRKLVQNGPEIHPGANFIQQRHT 425 Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518 KRFL+YGNR+K+A++L G +VERHL+DGD+VLFNRQPSLH++SIM+H K Sbjct: 426 QMKRFLKYGNREKIAQELRFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHILK 478 [144][TOP] >UniRef100_B2VYJ3 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2VYJ3_PYRTR Length = 1471 Score = 209 bits (533), Expect = 9e-53 Identities = 108/197 (54%), Positives = 139/197 (70%), Gaps = 11/197 (5%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NSDA L K +RG SQRLKGK GRFR NLSGKRVDFSGR Sbjct: 322 MEQWDFLQLQIAMYINSDAPGLKQ-QGLQKTMRGFSQRLKGKGGRFRQNLSGKRVDFSGR 380 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVI PDPNL +D+V +P R+A+ LTYPE+VT++N ++L V G YPGAN++ T G Sbjct: 381 TVIGPDPNLSIDEVAVPQRIAKNLTYPEKVTRYNIEKLRRLVRNGAQKYPGANYILTGQG 440 Query: 363 -NKRFLRYG----NRKK------VAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSH 509 NK ++ +R K AK L +G +VERH+ DGD+VLFNRQPSLH++SI+SH Sbjct: 441 PNKDPIKISLIALSRNKGERLDFTAKRLKIGDIVERHIEDGDIVLFNRQPSLHKLSILSH 500 Query: 510 SAKVVPHRTFRFNECVC 560 AK+ P RTFR NECVC Sbjct: 501 RAKIRPWRTFRLNECVC 517 [145][TOP] >UniRef100_C4KIV8 DNA-directed RNA polymerase n=1 Tax=Sulfolobus islandicus M.16.4 RepID=C4KIV8_SULIK Length = 880 Score = 209 bits (533), Expect = 9e-53 Identities = 108/187 (57%), Positives = 135/187 (72%), Gaps = 2/187 (1%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ A + +++ LPP + +PLR ++QRLKGK GRFRGNLSGKRVDFS R Sbjct: 264 DLWDLLQYHVATYFDNEIPGLPPSKHRSGRPLRTLAQRLKGKEGRFRGNLSGKRVDFSSR 323 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPN+ +D+VG+P +ARTLT PER+T N ++L VI GPD +PGAN+V DG Sbjct: 324 TVISPDPNISIDEVGVPEIIARTLTVPERITPWNIEKLRQFVINGPDKWPGANYVIRPDG 383 Query: 363 NKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 + LRY +RK++A L G VVERHL DGDVVLFNRQPSLHRIS+M+H +V+ TF Sbjct: 384 RRIDLRYVKDRKELASTLAPGYVVERHLTDGDVVLFNRQPSLHRISMMAHRVRVLKGLTF 443 Query: 540 RFNECVC 560 R N VC Sbjct: 444 RLNLLVC 450 [146][TOP] >UniRef100_C3MY99 DNA-directed RNA polymerase n=2 Tax=Sulfolobus islandicus RepID=C3MY99_SULIM Length = 880 Score = 209 bits (533), Expect = 9e-53 Identities = 108/187 (57%), Positives = 135/187 (72%), Gaps = 2/187 (1%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ A + +++ LPP + +PLR ++QRLKGK GRFRGNLSGKRVDFS R Sbjct: 264 DLWDLLQYHVATYFDNEIPGLPPSKHRSGRPLRTLAQRLKGKEGRFRGNLSGKRVDFSSR 323 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPN+ +D+VG+P +ARTLT PER+T N ++L VI GPD +PGAN+V DG Sbjct: 324 TVISPDPNISIDEVGVPEIIARTLTVPERITPWNIEKLRQFVINGPDKWPGANYVIRPDG 383 Query: 363 NKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 + LRY +RK++A L G VVERHL DGDVVLFNRQPSLHRIS+M+H +V+ TF Sbjct: 384 RRIDLRYVKDRKELASTLAPGYVVERHLTDGDVVLFNRQPSLHRISMMAHRVRVLKGLTF 443 Query: 540 RFNECVC 560 R N VC Sbjct: 444 RLNLLVC 450 [147][TOP] >UniRef100_C3MRK3 DNA-directed RNA polymerase n=3 Tax=Sulfolobus islandicus RepID=C3MRK3_SULIL Length = 880 Score = 209 bits (533), Expect = 9e-53 Identities = 108/187 (57%), Positives = 135/187 (72%), Gaps = 2/187 (1%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ A + +++ LPP + +PLR ++QRLKGK GRFRGNLSGKRVDFS R Sbjct: 264 DLWDLLQYHVATYFDNEIPGLPPSKHRSGRPLRTLAQRLKGKEGRFRGNLSGKRVDFSSR 323 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPN+ +D+VG+P +ARTLT PER+T N ++L VI GPD +PGAN+V DG Sbjct: 324 TVISPDPNISIDEVGVPEIIARTLTVPERITPWNIEKLRQFVINGPDKWPGANYVIRPDG 383 Query: 363 NKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 + LRY +RK++A L G VVERHL DGDVVLFNRQPSLHRIS+M+H +V+ TF Sbjct: 384 RRIDLRYVKDRKELASTLAPGYVVERHLTDGDVVLFNRQPSLHRISMMAHRVRVLKGLTF 443 Query: 540 RFNECVC 560 R N VC Sbjct: 444 RLNLLVC 450 [148][TOP] >UniRef100_A4YCQ9 DNA-directed RNA polymerase n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YCQ9_METS5 Length = 886 Score = 209 bits (533), Expect = 9e-53 Identities = 106/187 (56%), Positives = 135/187 (72%), Gaps = 2/187 (1%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ A + +++ LP + +PLR ++QRLKGK GRFRGNLSGKRVDFS R Sbjct: 270 DLWDLLQYHVATYFDNEIPGLPTSKHRSGRPLRTLAQRLKGKEGRFRGNLSGKRVDFSAR 329 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPN+ +D+VG+P VA+ LT PE+VTK N +R+ VI GPD +PGAN+V DG Sbjct: 330 TVISPDPNISIDEVGVPYDVAQILTVPEKVTKWNIERMRQYVINGPDKWPGANYVVRPDG 389 Query: 363 NKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 + LRY +RK++A L +VERHLVDGD+V+FNRQPSLHRIS+M H +V+P RTF Sbjct: 390 RRIDLRYVKDRKELAATLAPNFIVERHLVDGDIVIFNRQPSLHRISMMGHKVRVLPGRTF 449 Query: 540 RFNECVC 560 R N VC Sbjct: 450 RLNLLVC 456 [149][TOP] >UniRef100_B8YB53 DNA-directed RNA polymerase n=1 Tax=Sulfolobus shibatae B12 RepID=B8YB53_SULSH Length = 880 Score = 209 bits (533), Expect = 9e-53 Identities = 108/187 (57%), Positives = 135/187 (72%), Gaps = 2/187 (1%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ A + +++ LPP + +PLR ++QRLKGK GRFRGNLSGKRVDFS R Sbjct: 264 DLWDLLQYHVATYFDNEIPGLPPSKHRSGRPLRTLAQRLKGKEGRFRGNLSGKRVDFSSR 323 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPN+ +D+VG+P +ARTLT PER+T N ++L VI GPD +PGAN+V DG Sbjct: 324 TVISPDPNISIDEVGVPEIIARTLTVPERITPWNIEKLRQFVINGPDKWPGANYVIRPDG 383 Query: 363 NKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 + LRY +RK++A L G VVERHL DGDVVLFNRQPSLHRIS+M+H +V+ TF Sbjct: 384 RRIDLRYVKDRKELASTLAPGYVVERHLTDGDVVLFNRQPSLHRISMMAHRVRVLKGLTF 443 Query: 540 RFNECVC 560 R N VC Sbjct: 444 RLNLLVC 450 [150][TOP] >UniRef100_UPI0001505876 NRPC1; DNA binding / DNA-directed RNA polymerase/ ribonucleoside binding / zinc ion binding n=1 Tax=Arabidopsis thaliana RepID=UPI0001505876 Length = 1376 Score = 209 bits (532), Expect = 1e-52 Identities = 103/186 (55%), Positives = 135/186 (72%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M W+ +Q+E AR++NS+ PL GI QRLKGK GRFR NLSGKRV+F+GR Sbjct: 309 MQVWDTVQIEVARYINSEVRGCQNQPEE-HPLSGILQRLKGKGGRFRANLSGKRVEFTGR 367 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNL++ +VGIP+ +A+ LT+PE V++HN ++L V GP+ YPGA V DG Sbjct: 368 TVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYPGARNVRYPDG 427 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + R L RK++A +L +G +V+RHL +GDVVLFNRQPSLHR+SIM H A+++P RT R Sbjct: 428 SSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHRMSIMCHRARIMPWRTLR 487 Query: 543 FNECVC 560 FNE VC Sbjct: 488 FNESVC 493 [151][TOP] >UniRef100_Q9LVH0 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana RepID=Q9LVH0_ARATH Length = 1383 Score = 209 bits (532), Expect = 1e-52 Identities = 103/186 (55%), Positives = 135/186 (72%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M W+ +Q+E AR++NS+ PL GI QRLKGK GRFR NLSGKRV+F+GR Sbjct: 309 MQVWDTVQIEVARYINSEVRGCQNQPEE-HPLSGILQRLKGKGGRFRANLSGKRVEFTGR 367 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNL++ +VGIP+ +A+ LT+PE V++HN ++L V GP+ YPGA V DG Sbjct: 368 TVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYPGARNVRYPDG 427 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + R L RK++A +L +G +V+RHL +GDVVLFNRQPSLHR+SIM H A+++P RT R Sbjct: 428 SSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHRMSIMCHRARIMPWRTLR 487 Query: 543 FNECVC 560 FNE VC Sbjct: 488 FNESVC 493 [152][TOP] >UniRef100_Q0V3B7 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum RepID=Q0V3B7_PHANO Length = 1473 Score = 209 bits (531), Expect = 2e-52 Identities = 110/199 (55%), Positives = 138/199 (69%), Gaps = 13/199 (6%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W++LQ++ A ++NSDA L K +RG SQRLKGK GRFR NLSGKRVDFSGR Sbjct: 322 MEQWDFLQLQIAMYINSDAPGLKQ-QGLQKTMRGFSQRLKGKGGRFRQNLSGKRVDFSGR 380 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVI PDPNL +D+V +P RVA+ LTYPE+VT++N K+L V+ G + YPGAN++ D G Sbjct: 381 TVIGPDPNLSIDEVAVPQRVAKILTYPEKVTRYNIKKLQKLVLNGANKYPGANYILKDLG 440 Query: 363 N------------KRFLRYGNR-KKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIM 503 R + G+R + A L G VVERHL DGD+VLFNRQPSLH++SI+ Sbjct: 441 PDQDPRKVSLIALSRHDKKGDRLQGPAAALRFGDVVERHLEDGDIVLFNRQPSLHKLSIL 500 Query: 504 SHSAKVVPHRTFRFNECVC 560 SH AK+ P RTFR NECVC Sbjct: 501 SHRAKIRPWRTFRLNECVC 519 [153][TOP] >UniRef100_Q4DZA9 DNA-directed RNA polymerase n=1 Tax=Trypanosoma cruzi RepID=Q4DZA9_TRYCR Length = 1553 Score = 208 bits (530), Expect = 2e-52 Identities = 108/186 (58%), Positives = 139/186 (74%), Gaps = 2/186 (1%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 WE LQ+ AAR ++S PP TA ++ +QRLKGK GRFRGNLSGKRVDFSGR+VI Sbjct: 314 WEMLQMRAARLIDSALPGFPPHMRTAD-VKSYAQRLKGKHGRFRGNLSGKRVDFSGRSVI 372 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVE-TDDGNK 368 SPDPNL VD++ +PLRVAR LTYP+RV K N + + V GP+ +PGA V +G+K Sbjct: 373 SPDPNLDVDELAVPLRVARVLTYPQRVFKSNLELMRRLVRNGPNVHPGAVAVYLAQEGSK 432 Query: 369 RFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545 + L + +R+ ++ L +G VVERH+++GDVVLFNRQPSLHRIS+M+H A+V+P RTFRF Sbjct: 433 KSLNHERDRESLSARLSIGDVVERHVMNGDVVLFNRQPSLHRISMMAHRARVLPFRTFRF 492 Query: 546 NECVCA 563 NEC CA Sbjct: 493 NECCCA 498 [154][TOP] >UniRef100_Q980R2 DNA-directed RNA polymerase subunit A' n=2 Tax=Sulfolobus solfataricus RepID=RPOA1_SULSO Length = 880 Score = 208 bits (530), Expect = 2e-52 Identities = 104/187 (55%), Positives = 136/187 (72%), Gaps = 2/187 (1%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ A + +++ LPP + +PLR ++QRLKGK GRFRGNLSGKRVDFS R Sbjct: 264 DLWDLLQYHVATYFDNEIPGLPPSKHRSGRPLRTLAQRLKGKEGRFRGNLSGKRVDFSSR 323 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPN+ +D+VG+P +A+TLT PER+T N ++L VI GPD +PGAN+V DG Sbjct: 324 TVISPDPNISIDEVGVPEIIAKTLTVPERITPWNIEKLRQFVINGPDKWPGANYVIRPDG 383 Query: 363 NKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 + LRY +RK++A L G ++ERHL+DGD+VLFNRQPSLHRIS+M+H +V+ TF Sbjct: 384 RRIDLRYVKDRKELASTLAPGYIIERHLIDGDIVLFNRQPSLHRISMMAHRVRVLKGLTF 443 Query: 540 RFNECVC 560 R N VC Sbjct: 444 RLNLLVC 450 [155][TOP] >UniRef100_Q9V114 DNA-directed RNA polymerase n=1 Tax=Pyrococcus abyssi RepID=Q9V114_PYRAB Length = 907 Score = 208 bits (529), Expect = 3e-52 Identities = 96/186 (51%), Positives = 138/186 (74%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ ++N++ + +PP + +PL+ ++QRLKGK GRFRGNLSGKRV+FS R Sbjct: 270 DLWDLLQYHVTTYINNETSGVPPAKHKSGRPLKTLAQRLKGKEGRFRGNLSGKRVNFSAR 329 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDP + +++VG+P+++A LT PE+VT+ N ++L V+ GPD YPGAN+V +G Sbjct: 330 TVISPDPMISINEVGVPIQIAMELTVPEKVTEFNIEKLRKMVLNGPDKYPGANYVIDPEG 389 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + + NR+ +A+ + +G VERHL+DGD+VLFNRQPSLHR+SIM+H +V+P+RTFR Sbjct: 390 RRIRIMESNRENLARMIDIGWTVERHLLDGDIVLFNRQPSLHRMSIMAHRVRVMPYRTFR 449 Query: 543 FNECVC 560 N VC Sbjct: 450 LNLAVC 455 [156][TOP] >UniRef100_O59227 DNA-directed RNA polymerase n=1 Tax=Pyrococcus horikoshii RepID=O59227_PYRHO Length = 907 Score = 208 bits (529), Expect = 3e-52 Identities = 96/186 (51%), Positives = 138/186 (74%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ ++N++ + +PP + +PL+ ++QRLKGK GRFRGNLSGKRV+FS R Sbjct: 270 DLWDLLQYHVTTYINNETSGVPPAKHKSGRPLKTLAQRLKGKEGRFRGNLSGKRVNFSAR 329 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDP + +++VG+P+++A LT PE+VT+ N ++L V+ GPD YPGAN+V +G Sbjct: 330 TVISPDPMISINEVGVPIQIAMELTVPEKVTEFNIEKLRKMVLNGPDKYPGANYVIDPEG 389 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + + N++ +AK + +G VERHLVDGD+VLFNRQPSLHR+SIM+H +V+P++TFR Sbjct: 390 RRIRIMESNKENLAKMIDIGWTVERHLVDGDIVLFNRQPSLHRMSIMAHRVRVMPYKTFR 449 Query: 543 FNECVC 560 N VC Sbjct: 450 LNLAVC 455 [157][TOP] >UniRef100_Q5JE33 DNA-directed RNA polymerase n=1 Tax=Thermococcus kodakarensis RepID=Q5JE33_PYRKO Length = 906 Score = 207 bits (527), Expect = 4e-52 Identities = 100/186 (53%), Positives = 136/186 (73%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ ++N++ + +PP + +PL+ ++QRLKGK GRFRGNLSGKRV+FS R Sbjct: 270 DLWDLLQYHVTTYINNETSGVPPAKHKSGRPLKTLAQRLKGKEGRFRGNLSGKRVNFSAR 329 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDP + +++VG+PL VA LT PE+VT+ N ++L V+ GP+ YPGAN+V +G Sbjct: 330 TVISPDPMISINEVGVPLAVAMELTVPEKVTEFNYEKLKQRVLNGPEKYPGANYVIDPEG 389 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + L NR+ +A+ L +G VERHL DGDVVLFNRQPSLHR+SIM+H +V+P+RTFR Sbjct: 390 RRIRLMESNRELIAEKLDIGWTVERHLEDGDVVLFNRQPSLHRMSIMAHRVRVMPYRTFR 449 Query: 543 FNECVC 560 N VC Sbjct: 450 LNLPVC 455 [158][TOP] >UniRef100_A3DMP4 DNA-directed RNA polymerase n=1 Tax=Staphylothermus marinus F1 RepID=A3DMP4_STAMF Length = 886 Score = 207 bits (527), Expect = 4e-52 Identities = 102/186 (54%), Positives = 134/186 (72%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D WE LQ + +++A +P + K L+G++QRLKGK GRFRGNL GKRVDFS R Sbjct: 269 DEWELLQYHVTTYFDNEAPGIPVARHRSGKVLKGLAQRLKGKEGRFRGNLRGKRVDFSAR 328 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPN+ +++VG+P VA+ LT PERVT N + + V+ GPD +PGAN+V DG Sbjct: 329 TVISPDPNISINEVGVPEVVAKILTVPERVTPWNIEEMRRLVLNGPDKWPGANYVIRPDG 388 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + L+Y +RK +A+ L G +VERHL DGD+VLFNRQPSLHRISIM+H +V+P++TFR Sbjct: 389 RRISLKYVDRKAMAETLAPGFIVERHLRDGDIVLFNRQPSLHRISIMAHVVRVLPYKTFR 448 Query: 543 FNECVC 560 N VC Sbjct: 449 LNLLVC 454 [159][TOP] >UniRef100_P31813 DNA-directed RNA polymerase subunit A' n=1 Tax=Thermococcus celer RepID=RPOA1_THECE Length = 905 Score = 207 bits (527), Expect = 4e-52 Identities = 99/186 (53%), Positives = 136/186 (73%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ ++N++ + +PP + +PL+ +SQRLKGK GRFRGNLSGKRV+FS R Sbjct: 270 DLWDLLQYHVTTYINNETSGIPPAKHKSGRPLKTLSQRLKGKEGRFRGNLSGKRVNFSAR 329 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDP + +++VG+P+ +A LT PE+VT+ N ++L V+ GP+ YPGAN+V +G Sbjct: 330 TVISPDPMISINEVGVPMAIAMELTVPEKVTEFNFEKLRKMVLNGPEKYPGANYVIDPEG 389 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + L N + VA+ L +G VERHL+DGDVVLFNRQPSLHR+SIM+H +V+P+RTFR Sbjct: 390 RRIRLMENNLETVAEKLDIGWTVERHLLDGDVVLFNRQPSLHRMSIMAHRVRVMPYRTFR 449 Query: 543 FNECVC 560 N VC Sbjct: 450 LNLSVC 455 [160][TOP] >UniRef100_A1RWW5 DNA-directed RNA polymerase n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWW5_THEPD Length = 888 Score = 207 bits (526), Expect = 6e-52 Identities = 101/183 (55%), Positives = 138/183 (75%), Gaps = 2/183 (1%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W LQ A + +++ +PP + +PLR ++QRLKGK GRFRG+L+GKRVDFS R Sbjct: 268 DLWNLLQFHVATYFDNELPGIPPARHRSGRPLRTLAQRLKGKEGRFRGSLAGKRVDFSSR 327 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNL +++VG+P+ VA+ LT PE+VT N ++L VI GPD +PGAN++ DG Sbjct: 328 TVISPDPNLSINEVGVPIDVAKVLTVPEKVTPWNIEKLRKLVINGPDVWPGANYIIKPDG 387 Query: 363 NKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 ++ LRY +R+++++ L G +VERHL+DGDVVLFNRQPSLHRISIM+H KV+P++TF Sbjct: 388 SRIDLRYVKHREEISQTLKPGYIVERHLMDGDVVLFNRQPSLHRISIMAHIVKVLPYKTF 447 Query: 540 RFN 548 R N Sbjct: 448 RLN 450 [161][TOP] >UniRef100_B9GIK9 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9GIK9_POPTR Length = 1394 Score = 206 bits (525), Expect = 8e-52 Identities = 102/184 (55%), Positives = 128/184 (69%) Frame = +3 Query: 9 GWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTV 188 GW+ LQ ++NSD +P +PL G QRL GK GRFR NL+GKRV+F+GRTV Sbjct: 311 GWDELQAVVTLYINSDV-RIPLDMQVGRPLSGFVQRLTGKQGRFRQNLAGKRVEFTGRTV 369 Query: 189 ISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNK 368 ISPDPNL++ +V IP+ +AR LTYPERVT HN ++L V G YPGA V DG+ Sbjct: 370 ISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVNNGSYKYPGARMVTYPDGSS 429 Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 + L RK++A++L G +V RHL DGDVVLFNRQPSLHR+SIM H A+++P RT RFN Sbjct: 430 KMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFN 489 Query: 549 ECVC 560 E VC Sbjct: 490 ESVC 493 [162][TOP] >UniRef100_B2ADZ3 DNA-directed RNA polymerase n=1 Tax=Podospora anserina RepID=B2ADZ3_PODAN Length = 1521 Score = 206 bits (525), Expect = 8e-52 Identities = 107/194 (55%), Positives = 135/194 (69%), Gaps = 7/194 (3%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ WE+LQ++ ++NSD L K RG QRLKGK GRFRGNLSGKRVDFSGR Sbjct: 324 MEQWEFLQLQVGMYVNSDVPGLVQ-QGFGKVTRGFCQRLKGKQGRFRGNLSGKRVDFSGR 382 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNL ++QV +P RVA+ LTYPERV +N ++L A V GP YPGA + + G Sbjct: 383 TVISPDPNLSIEQVAVPERVAKNLTYPERVHANNIQKLKACVRNGPTEYPGALQITKNQG 442 Query: 363 NKRFLRYGNR-------KKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521 + +++ + +K A +L +G VVERHL D D+VLFNRQPSLH++SIMSH AK+ Sbjct: 443 EENEMKFLLKHMKPHILEKNADNLRIGDVVERHLEDNDIVLFNRQPSLHKLSIMSHYAKI 502 Query: 522 VPHRTFRFNECVCA 563 P RTFR NECVC+ Sbjct: 503 RPWRTFRLNECVCS 516 [163][TOP] >UniRef100_B6YT16 DNA-directed RNA polymerase n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YT16_THEON Length = 905 Score = 204 bits (520), Expect = 3e-51 Identities = 96/186 (51%), Positives = 136/186 (73%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ ++N++ + +PP + +PL+ ++QRLKGK GRFRGNLSGKRV+FS R Sbjct: 270 DLWDLLQYHVTTYINNETSGIPPAKHKSGRPLKTLAQRLKGKEGRFRGNLSGKRVNFSAR 329 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDP + +++VG+P+ VA LT PE+VT+ N ++L V+ GP+ YPGAN+V +G Sbjct: 330 TVISPDPMISINEVGVPIAVAMELTVPEKVTEFNYEKLKKMVLNGPEKYPGANYVIDPEG 389 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + L N + +A+ L +G VERHL+DGD+VLFNRQPSLHR+SIM+H +V+P++TFR Sbjct: 390 RRIRLMENNLEIIAEKLDIGWTVERHLLDGDIVLFNRQPSLHRMSIMAHRVRVMPYKTFR 449 Query: 543 FNECVC 560 N VC Sbjct: 450 LNLAVC 455 [164][TOP] >UniRef100_A2BN34 DNA-directed RNA polymerase n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BN34_HYPBU Length = 881 Score = 204 bits (520), Expect = 3e-51 Identities = 100/184 (54%), Positives = 132/184 (71%), Gaps = 1/184 (0%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTA-KPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTV 188 W LQ A + +++ +P +PL+G++QRLKGK GRFRGNLSGKRVD+S RTV Sbjct: 268 WTLLQYHVATYFDNELPRIPVARHRGGRPLKGLAQRLKGKEGRFRGNLSGKRVDYSARTV 327 Query: 189 ISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNK 368 ISPDPN+ +++VG+P+ +A+TLT VT N + + V+ GPD +PGAN+V T DG K Sbjct: 328 ISPDPNISINEVGVPIEIAKTLTVRTPVTPWNIEEMRRYVLNGPDRWPGANYVITKDGRK 387 Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 LRY +RK++A+ L G VERHL DGD+VLFNRQPSLHR+SIM+H KV+P +TFR N Sbjct: 388 IDLRYADRKRIAEMLEPGWFVERHLRDGDIVLFNRQPSLHRMSIMAHIVKVLPGKTFRLN 447 Query: 549 ECVC 560 VC Sbjct: 448 LLVC 451 [165][TOP] >UniRef100_B8D6G9 DNA-directed RNA polymerase n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D6G9_DESK1 Length = 886 Score = 204 bits (518), Expect = 5e-51 Identities = 99/186 (53%), Positives = 132/186 (70%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D WE LQ + +++ LP + K L+GI+QRLKGK GRFR NL GKRVDFS R Sbjct: 269 DEWELLQYHITTYFDNEVPGLPVAKHRSGKTLKGIAQRLKGKEGRFRNNLRGKRVDFSAR 328 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDP+L +++VG+P VA+ LT PERVT N + + V+ GP+ +PGAN++ DG Sbjct: 329 TVISPDPSLSINEVGVPEDVAKILTIPERVTPWNIEEMRKLVLNGPEKWPGANYIVRPDG 388 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K L++ +RK A+ L G +VERHL+DGD+VLFNRQPSLHRIS+M+H +V+P++TFR Sbjct: 389 RKISLKFVDRKAAAESLESGFIVERHLMDGDIVLFNRQPSLHRISVMAHVVRVLPYKTFR 448 Query: 543 FNECVC 560 N VC Sbjct: 449 LNLLVC 454 [166][TOP] >UniRef100_B5IVZ9 DNA-directed RNA polymerase n=1 Tax=Thermococcus barophilus MP RepID=B5IVZ9_9EURY Length = 906 Score = 203 bits (516), Expect = 8e-51 Identities = 97/186 (52%), Positives = 134/186 (72%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ ++N++ + +P + +PL+ ++QRLKGK GRFRGNLSGKRV+FS R Sbjct: 270 DLWDLLQYHVTTYINNETSGVPAAKHKSGRPLKTLAQRLKGKEGRFRGNLSGKRVNFSAR 329 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDP L +++VG+PL +A LT PE+VT N ++L V+ GP+ YPGAN+V G Sbjct: 330 TVISPDPMLSINEVGVPLAIAMELTVPEKVTDFNIEKLRKMVLNGPEKYPGANYVIDPQG 389 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + L NR+ +A+ L +G VERHL+DGD+VLFNRQPSLHR+SIM+H +V+P++TFR Sbjct: 390 RRIRLMESNRETIAEMLDIGWTVERHLMDGDIVLFNRQPSLHRMSIMAHRVRVMPYKTFR 449 Query: 543 FNECVC 560 N VC Sbjct: 450 LNLAVC 455 [167][TOP] >UniRef100_C5A208 DNA-directed RNA polymerase n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A208_THEGJ Length = 905 Score = 202 bits (515), Expect = 1e-50 Identities = 96/186 (51%), Positives = 135/186 (72%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ ++N++ + +PP + +PL+ ++QRLKGK GRFRGNLSGKRV+FS R Sbjct: 270 DLWDLLQYHVTTYINNETSGIPPAKHKSGRPLKTLAQRLKGKEGRFRGNLSGKRVNFSAR 329 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDP + +++VG+PL +A LT PE+VT+ N ++L V+ GP+ YPGAN+V +G Sbjct: 330 TVISPDPMISINEVGVPLAIAMELTVPEKVTEFNFEKLKQRVLNGPEKYPGANYVIDPEG 389 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + L N + +A+ L +G VERHL DGD+VLFNRQPSLHR+SIM+H +V+P++TFR Sbjct: 390 RRIRLMENNLETIAERLDIGWTVERHLEDGDIVLFNRQPSLHRMSIMAHRVRVMPYKTFR 449 Query: 543 FNECVC 560 N VC Sbjct: 450 LNLPVC 455 [168][TOP] >UniRef100_A8A925 DNA-directed RNA polymerase n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A925_IGNH4 Length = 889 Score = 202 bits (514), Expect = 1e-50 Identities = 103/185 (55%), Positives = 131/185 (70%), Gaps = 2/185 (1%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTV 188 W LQ A F +++ +PP + KPLR ++QRLKGK GRFR NLSGKRVDFS RTV Sbjct: 275 WGLLQYHVATFFDNEIPGIPPARHRSGKPLRTLAQRLKGKEGRFRSNLSGKRVDFSARTV 334 Query: 189 ISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNK 368 ISPDPN+ +++VG+P+ VA+TLT P +VT N + + VI GPD +PGAN+V DG + Sbjct: 335 ISPDPNISINEVGVPIEVAKTLTVPVKVTPWNIEEMRKLVINGPDKWPGANYVIMKDGRR 394 Query: 369 RFLRYG-NRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545 LRY +RK +A+ L G VERHL DGDVVLFNRQPSLHR+SIM+H +V+P +TFR Sbjct: 395 IDLRYAKDRKIIAESLQPGWTVERHLQDGDVVLFNRQPSLHRMSIMAHLVRVLPGKTFRL 454 Query: 546 NECVC 560 VC Sbjct: 455 CPLVC 459 [169][TOP] >UniRef100_A7AP17 DNA-directed RNA polymerase n=1 Tax=Babesia bovis RepID=A7AP17_BABBO Length = 1541 Score = 202 bits (513), Expect = 2e-50 Identities = 102/186 (54%), Positives = 133/186 (71%), Gaps = 3/186 (1%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLA---STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 W+ LQ++ R +N++A + L + +KP RG+ QRLKGK GRFRGNLSGKRVDFS R Sbjct: 362 WQCLQLQCTRLINAEAPAVSQLLVSRNISKPGRGVCQRLKGKEGRFRGNLSGKRVDFSAR 421 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPN+ VD+V +P +A LT+PE VT N + AV+ G +PGA +V+ +G Sbjct: 422 TVISPDPNVGVDEVVVPEWIAMKLTFPEEVTDSNISIMKKAVLNGVSIWPGATYVKKQNG 481 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K L+Y N K ++ +L +G VV RHL +GDVVLFNRQPSLHR+SIM+H +V+P TFR Sbjct: 482 GKCSLQYANPKYMSDNLTVGDVVLRHLWNGDVVLFNRQPSLHRMSIMAHRVRVMPGSTFR 541 Query: 543 FNECVC 560 FNECVC Sbjct: 542 FNECVC 547 [170][TOP] >UniRef100_Q8ZYQ8 DNA-directed RNA polymerase n=1 Tax=Pyrobaculum aerophilum RepID=Q8ZYQ8_PYRAE Length = 884 Score = 202 bits (513), Expect = 2e-50 Identities = 101/185 (54%), Positives = 135/185 (72%), Gaps = 2/185 (1%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTA-KPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTV 188 WE LQ A + +++ +P +PL+GI+QRLKGK GRFRG+LSGKRV+FS RTV Sbjct: 276 WELLQYHVATYFDNELPGIPVAKHRGGRPLKGIAQRLKGKEGRFRGSLSGKRVNFSARTV 335 Query: 189 ISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNK 368 ISPDP++ +++VG+P +A+ LT PERVT N L VIRGP+++PGAN+V T +G + Sbjct: 336 ISPDPHISINEVGVPYDIAKVLTVPERVTAWNVDVLREYVIRGPESWPGANYVVTPEGRR 395 Query: 369 RFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545 LRY +RK +A+ L G +VERHL+DGD+VLFNRQPSLHR+S+M H KV+P RTFR Sbjct: 396 IDLRYVKDRKALAERLAPGWIVERHLIDGDIVLFNRQPSLHRVSMMGHLVKVLPGRTFRL 455 Query: 546 NECVC 560 + VC Sbjct: 456 HLAVC 460 [171][TOP] >UniRef100_Q5KFV9 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans RepID=Q5KFV9_CRYNE Length = 1466 Score = 201 bits (512), Expect = 2e-50 Identities = 103/191 (53%), Positives = 130/191 (68%), Gaps = 8/191 (4%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 WE L A ++NS A + + S KP+RG QRLKGK GRFRGNLSGKRVDFSGRTVI Sbjct: 316 WEVLGQAVALYINSQAPGMQTIGS--KPIRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVI 373 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKR 371 PDPNLR+D+V +P +VA L+YPERVT +N + + A+I G +PGAN +E N Sbjct: 374 GPDPNLRIDEVAVPEKVAVKLSYPERVTDYNLQLMRQAIINGSKLHPGANVLERKHENGS 433 Query: 372 FLRYG--------NRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVP 527 +R RK+ A++L +G +V RH+ DGD+VLFNRQPSLH++SIM H +V P Sbjct: 434 TVRISLNVMKDLEARKRYARELQIGDIVHRHVRDGDIVLFNRQPSLHKLSIMCHRVRVRP 493 Query: 528 HRTFRFNECVC 560 RTFR NECVC Sbjct: 494 WRTFRLNECVC 504 [172][TOP] >UniRef100_B7R289 DNA-directed RNA polymerase n=1 Tax=Thermococcus sp. AM4 RepID=B7R289_9EURY Length = 905 Score = 201 bits (512), Expect = 2e-50 Identities = 96/186 (51%), Positives = 135/186 (72%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ ++N++ + +PP + +PL+ ++QRLKGK GRFRGNLSGKRV+FS R Sbjct: 270 DLWDLLQYHVTTYINNETSGVPPAKHKSGRPLKTLAQRLKGKEGRFRGNLSGKRVNFSAR 329 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDP + +++VG+PL +A LT PE+VT+ N ++L V+ GP+ YPGAN+V +G Sbjct: 330 TVISPDPMISINEVGVPLAIAMELTVPEKVTEFNFEKLRQRVLNGPEKYPGANYVIDPEG 389 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + L N + +A+ L +G VERHL DGD+VLFNRQPSLHR+SIM+H +V+P++TFR Sbjct: 390 RRIRLMENNLEIIAERLDIGWTVERHLEDGDIVLFNRQPSLHRMSIMAHRVRVMPYKTFR 449 Query: 543 FNECVC 560 N VC Sbjct: 450 LNLPVC 455 [173][TOP] >UniRef100_Q55QA7 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans RepID=Q55QA7_CRYNE Length = 1466 Score = 201 bits (511), Expect = 3e-50 Identities = 103/191 (53%), Positives = 130/191 (68%), Gaps = 8/191 (4%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 WE L A ++NS A + + S KP+RG QRLKGK GRFRGNLSGKRVDFSGRTVI Sbjct: 316 WEVLGQAVALYINSQAPGMQTIGS--KPIRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVI 373 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKR 371 PDPNLR+D+V +P +VA L+YPERVT +N + + A+I G +PGAN +E N Sbjct: 374 GPDPNLRIDEVAVPEKVAVKLSYPERVTDYNLQFMRQAIINGSKLHPGANVLERKHENGS 433 Query: 372 FLRYG--------NRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVP 527 +R RK+ A++L +G +V RH+ DGD+VLFNRQPSLH++SIM H +V P Sbjct: 434 TVRISLNVMKDLEARKRYARELQIGDIVHRHVRDGDIVLFNRQPSLHKLSIMCHRVRVRP 493 Query: 528 HRTFRFNECVC 560 RTFR NECVC Sbjct: 494 WRTFRLNECVC 504 [174][TOP] >UniRef100_B1YC25 DNA-directed RNA polymerase n=1 Tax=Thermoproteus neutrophilus V24Sta RepID=B1YC25_THENV Length = 884 Score = 200 bits (509), Expect = 5e-50 Identities = 100/185 (54%), Positives = 136/185 (73%), Gaps = 2/185 (1%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTA-KPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTV 188 W+ LQ A + +++ +P +PL+GI+QRLKGK GRFRG+LSGKRV+FS RTV Sbjct: 276 WDLLQYHVATYFDNELPGIPVAKHRGGRPLKGIAQRLKGKEGRFRGSLSGKRVNFSARTV 335 Query: 189 ISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNK 368 ISPDP++ +++VG+P +A+ LT PERVT+ N L V+RGP+T+PGAN+V T +G + Sbjct: 336 ISPDPHISINEVGVPYDIAKILTVPERVTEWNVDVLREYVMRGPETWPGANYVITPEGRR 395 Query: 369 RFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545 LRY +++ +A+ L G +VERHLVDGD+VLFNRQPSLHR+SIM H KV+P RTFR Sbjct: 396 IDLRYVKDKRALAERLAPGWIVERHLVDGDIVLFNRQPSLHRVSIMGHIVKVLPGRTFRL 455 Query: 546 NECVC 560 + VC Sbjct: 456 HLAVC 460 [175][TOP] >UniRef100_Q38BW7 DNA-directed RNA polymerase n=1 Tax=Trypanosoma brucei RepID=Q38BW7_9TRYP Length = 1530 Score = 200 bits (508), Expect = 7e-50 Identities = 102/186 (54%), Positives = 135/186 (72%), Gaps = 2/186 (1%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 WE LQ+ AAR ++S PP T+ L+ +QRLK K GRFR NLSGKRVD+SGR+VI Sbjct: 314 WEMLQMRAARLLDSSLPGFPPNVRTSD-LKSYAQRLKSKHGRFRCNLSGKRVDYSGRSVI 372 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVE-TDDGNK 368 SPDPNL VD++ +PL VAR LTYP+RV K N + + V GP +PGA V +G+K Sbjct: 373 SPDPNLDVDELAVPLHVARVLTYPQRVFKANHELMRRLVRNGPHVHPGATTVYLAQEGSK 432 Query: 369 RFLR-YGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545 + L+ +R ++A L +G +VERH+++GD+VLFNRQPSLHR+S+M+H A+V+P RTFRF Sbjct: 433 KSLKNERDRHRLAARLAVGDIVERHVMNGDLVLFNRQPSLHRVSMMAHRARVLPFRTFRF 492 Query: 546 NECVCA 563 NEC CA Sbjct: 493 NECCCA 498 [176][TOP] >UniRef100_Q27900 DNA-directed RNA polymerase (Fragment) n=1 Tax=Euplotes octocarinatus RepID=Q27900_EUPOC Length = 511 Score = 200 bits (508), Expect = 7e-50 Identities = 98/183 (53%), Positives = 124/183 (67%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 W LQ A+++N+D LP K +R QRLKGK GRFRGNLSGKRVDFSGRTVI Sbjct: 319 WNQLQYTLAQYINADTPGLPLNMVGNKAIRAFCQRLKGKQGRFRGNLSGKRVDFSGRTVI 378 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKR 371 SPDPN + QV +P+ +A+ T+P V +N + L + G + +PGANFV+ +G K Sbjct: 379 SPDPNAEIGQVIVPVDMAKIFTFPVCVNSYNIEFLKKLIKNGSEVHPGANFVQFQNGIKM 438 Query: 372 FLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFNE 551 +R N + K+L G +VERHL+DGD VLFNRQPSLHR+SIM H AKV+P +T RFNE Sbjct: 439 KIRENNSSVICKELKYGDIVERHLIDGDSVLFNRQPSLHRLSIMCHKAKVMPWKTLRFNE 498 Query: 552 CVC 560 C C Sbjct: 499 CCC 501 [177][TOP] >UniRef100_D0A1W8 DNA-directed RNA polymerase iii largest subunit (Rna polymerase iii largest subunit, putative) n=1 Tax=Trypanosoma brucei gambiense DAL972 RepID=D0A1W8_TRYBG Length = 1530 Score = 200 bits (508), Expect = 7e-50 Identities = 102/186 (54%), Positives = 135/186 (72%), Gaps = 2/186 (1%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 WE LQ+ AAR ++S PP T+ L+ +QRLK K GRFR NLSGKRVD+SGR+VI Sbjct: 314 WEMLQMRAARLLDSSLPGFPPNVRTSD-LKSYAQRLKSKHGRFRCNLSGKRVDYSGRSVI 372 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVE-TDDGNK 368 SPDPNL VD++ +PL VAR LTYP+RV K N + + V GP +PGA V +G+K Sbjct: 373 SPDPNLDVDELAVPLHVARVLTYPQRVFKANHELMRRLVRNGPHVHPGATTVYLAQEGSK 432 Query: 369 RFLR-YGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545 + L+ +R ++A L +G +VERH+++GD+VLFNRQPSLHR+S+M+H A+V+P RTFRF Sbjct: 433 KSLKNERDRHRLAARLAVGDIVERHVMNGDLVLFNRQPSLHRVSMMAHRARVLPFRTFRF 492 Query: 546 NECVCA 563 NEC CA Sbjct: 493 NECCCA 498 [178][TOP] >UniRef100_P08968 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Trypanosoma brucei brucei RepID=RPC1_TRYBB Length = 1530 Score = 200 bits (508), Expect = 7e-50 Identities = 102/186 (54%), Positives = 135/186 (72%), Gaps = 2/186 (1%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 WE LQ+ AAR ++S PP T+ L+ +QRLK K GRFR NLSGKRVD+SGR+VI Sbjct: 314 WEMLQMRAARLLDSSLPGFPPNVRTSD-LKSYAQRLKSKHGRFRCNLSGKRVDYSGRSVI 372 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVE-TDDGNK 368 SPDPNL VD++ +PL VAR LTYP+RV K N + + V GP +PGA V +G+K Sbjct: 373 SPDPNLDVDELAVPLHVARVLTYPQRVFKANHELMRRLVRNGPHVHPGATTVYLAQEGSK 432 Query: 369 RFLR-YGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545 + L+ +R ++A L +G +VERH+++GD+VLFNRQPSLHR+S+M+H A+V+P RTFRF Sbjct: 433 KSLKNERDRHRLAARLAVGDIVERHVMNGDLVLFNRQPSLHRVSMMAHRARVLPFRTFRF 492 Query: 546 NECVCA 563 NEC CA Sbjct: 493 NECCCA 498 [179][TOP] >UniRef100_A4WN99 DNA-directed RNA polymerase n=1 Tax=Pyrobaculum arsenaticum DSM 13514 RepID=A4WN99_PYRAR Length = 884 Score = 199 bits (505), Expect = 2e-49 Identities = 101/185 (54%), Positives = 134/185 (72%), Gaps = 2/185 (1%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTA-KPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTV 188 W+ LQ A + +++ +P +PL+GI+QRLKGK GRFRG+LSGKRV+FS RTV Sbjct: 276 WDLLQYHVATYFDNELPGIPVAKHRGGRPLKGIAQRLKGKEGRFRGSLSGKRVNFSARTV 335 Query: 189 ISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNK 368 ISPDP++ +++VG+P +A+ LT PE+VT N L VIRGP+T+PGAN+V T +G + Sbjct: 336 ISPDPHISINEVGVPTDIAKILTVPEKVTAWNIDVLREYVIRGPETWPGANYVVTPEGRR 395 Query: 369 RFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545 LRY +RK +A+ L G VVERHL DGD+VLFNRQPSLHR+S+M H KV+P RTFR Sbjct: 396 IDLRYVKDRKALAERLAPGWVVERHLRDGDIVLFNRQPSLHRVSMMGHLVKVLPGRTFRL 455 Query: 546 NECVC 560 + VC Sbjct: 456 HLAVC 460 [180][TOP] >UniRef100_A2DEX5 DNA-directed RNA polymerase n=1 Tax=Trichomonas vaginalis G3 RepID=A2DEX5_TRIVA Length = 1657 Score = 198 bits (504), Expect = 2e-49 Identities = 107/189 (56%), Positives = 131/189 (69%), Gaps = 2/189 (1%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTA-KPLRGISQRLKGKTGRFRGNLSGKRVDFSG 179 M+ W LQ +NS+A + KP+ G+ QRLKGK GRFR NLSGKRV++SG Sbjct: 281 MELWSSLQQNVNSSINSEAADTAAKTKKKNKPVIGVIQRLKGKQGRFRTNLSGKRVNYSG 340 Query: 180 RTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA-NFVETD 356 RTVISPDPN+ VDQV IP+ +A+ LT+P RVTK N+K L V GPD YPGA N ++ D Sbjct: 341 RTVISPDPNVNVDQVVIPVSMAKILTFPTRVTKFNKKDLMRYVKNGPDKYPGANNIIKAD 400 Query: 357 DGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536 G K L YGN+++ A++L G +VERHL+D D VLFNRQPSLHRISIM AKV+ T Sbjct: 401 TGFKLSLAYGNKEQRAQELREGDIVERHLLDNDTVLFNRQPSLHRISIMGFRAKVMEWCT 460 Query: 537 FRFNECVCA 563 RFNE VCA Sbjct: 461 MRFNESVCA 469 [181][TOP] >UniRef100_A1RSE8 DNA-directed RNA polymerase n=1 Tax=Pyrobaculum islandicum DSM 4184 RepID=A1RSE8_PYRIL Length = 884 Score = 198 bits (504), Expect = 2e-49 Identities = 101/185 (54%), Positives = 134/185 (72%), Gaps = 2/185 (1%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTA-KPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTV 188 W+ LQ A + +++ +P +PL+GI+QRLKGK GRFRG+LSGKRV+FS RTV Sbjct: 276 WDLLQYHIATYFDNELPGIPVAKHRGGRPLKGIAQRLKGKEGRFRGSLSGKRVNFSARTV 335 Query: 189 ISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNK 368 ISPDP++ +++VG+P VA+ LT PERVT N L VIRGP+T+PGAN+V T +G + Sbjct: 336 ISPDPHISINEVGVPYDVAKILTVPERVTPWNVDILREYVIRGPETWPGANYVVTPEGRR 395 Query: 369 RFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545 LRY +R+ +A+ L G +VERHL DGD+VLFNRQPSLHR+S+M H KV+P RTFR Sbjct: 396 IDLRYVKDRRALAERLAPGWIVERHLRDGDIVLFNRQPSLHRVSMMGHLVKVLPGRTFRL 455 Query: 546 NECVC 560 + VC Sbjct: 456 HLAVC 460 [182][TOP] >UniRef100_A3MXZ0 DNA-directed RNA polymerase n=1 Tax=Pyrobaculum calidifontis JCM 11548 RepID=A3MXZ0_PYRCJ Length = 884 Score = 198 bits (503), Expect = 3e-49 Identities = 98/185 (52%), Positives = 134/185 (72%), Gaps = 2/185 (1%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLASTA-KPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTV 188 W+ LQ A + +++ +P +PL+GI+QRLKGK GRFRG+LS KRV+FS RTV Sbjct: 276 WDLLQYHVATYFDNELPGIPVAKHRGGRPLKGIAQRLKGKEGRFRGSLSSKRVNFSARTV 335 Query: 189 ISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNK 368 ISPDP++ +++VG+P+ +A+ LT PERVT N L V+RGP+ +PGAN+V T +G + Sbjct: 336 ISPDPHISINEVGVPIDIAKVLTVPERVTTWNIDALREYVLRGPEAWPGANYVITPEGRR 395 Query: 369 RFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545 LRY +R+ +A+ L G +VERHLVDGD+VLFNRQPSLHR+S+M H KV+P RTFR Sbjct: 396 IDLRYVKDRRALAERLAPGWIVERHLVDGDIVLFNRQPSLHRVSMMGHLVKVLPGRTFRL 455 Query: 546 NECVC 560 + VC Sbjct: 456 HLAVC 460 [183][TOP] >UniRef100_A4HAF0 DNA-directed RNA polymerase n=1 Tax=Leishmania braziliensis RepID=A4HAF0_LEIBR Length = 1581 Score = 196 bits (499), Expect = 8e-49 Identities = 99/189 (52%), Positives = 131/189 (69%), Gaps = 2/189 (1%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 ++ WE LQ AR +++ P T + + +QR+KGK GRFRGNLSGKRVDFSGR Sbjct: 306 VETWELLQTRVARLLDAALPGFPSHLRTTE-CKSYAQRMKGKQGRFRGNLSGKRVDFSGR 364 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA--NFVETD 356 +VISPDPNLR+D++ +PLRVAR LTYP+RV N + + V GP +PGA ++ + Sbjct: 365 SVISPDPNLRIDELAVPLRVARVLTYPQRVFAGNIQLMRRLVRNGPHVHPGALTVYLSKE 424 Query: 357 DGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536 K +R+ +A L +G VVERH+++GD VLFNRQPSLHRIS+M+H A+V+P RT Sbjct: 425 CSRKSLRNARDREAIAARLSIGDVVERHVMNGDYVLFNRQPSLHRISLMAHRARVLPFRT 484 Query: 537 FRFNECVCA 563 FRFNEC CA Sbjct: 485 FRFNECCCA 493 [184][TOP] >UniRef100_Q4Q3H2 DNA-directed RNA polymerase n=1 Tax=Leishmania major RepID=Q4Q3H2_LEIMA Length = 1582 Score = 196 bits (498), Expect = 1e-48 Identities = 98/189 (51%), Positives = 131/189 (69%), Gaps = 2/189 (1%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 ++ WE LQ AR +++ P T + + +QR+KGK GRFRGNLSGKRVDFSGR Sbjct: 306 VETWELLQTRVARLLDAALPGFPSHLRTVE-CKSYAQRMKGKQGRFRGNLSGKRVDFSGR 364 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA--NFVETD 356 +VISPDPNLR+D++ +PLRVAR LTYP+RV N + + V GP +PGA ++ + Sbjct: 365 SVISPDPNLRIDELAVPLRVARVLTYPQRVFAGNIQLMRRLVRNGPHVHPGALTVYLSKE 424 Query: 357 DGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536 K +R+ +A L +G VVERH+++GD +LFNRQPSLHRIS+M+H A+V+P RT Sbjct: 425 CSRKSLRNARDREAIAARLSIGDVVERHVMNGDYILFNRQPSLHRISLMAHRARVLPFRT 484 Query: 537 FRFNECVCA 563 FRFNEC CA Sbjct: 485 FRFNECCCA 493 [185][TOP] >UniRef100_A4I9K6 DNA-directed RNA polymerase n=1 Tax=Leishmania infantum RepID=A4I9K6_LEIIN Length = 1590 Score = 196 bits (498), Expect = 1e-48 Identities = 98/189 (51%), Positives = 131/189 (69%), Gaps = 2/189 (1%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 ++ WE LQ AR +++ P T + + +QR+KGK GRFRGNLSGKRVDFSGR Sbjct: 306 VETWELLQTRVARLLDAALPGFPSHLRTVE-CKSYAQRMKGKQGRFRGNLSGKRVDFSGR 364 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA--NFVETD 356 +VISPDPNLR+D++ +PLRVAR LTYP+RV N + + V GP +PGA ++ + Sbjct: 365 SVISPDPNLRIDELAVPLRVARVLTYPQRVFAGNIQLMRRLVRNGPHVHPGALTVYLSKE 424 Query: 357 DGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536 K +R+ +A L +G VVERH+++GD +LFNRQPSLHRIS+M+H A+V+P RT Sbjct: 425 CSRKSLRNARDREAIAARLSIGDVVERHVMNGDYILFNRQPSLHRISLMAHRARVLPFRT 484 Query: 537 FRFNECVCA 563 FRFNEC CA Sbjct: 485 FRFNECCCA 493 [186][TOP] >UniRef100_B6QI35 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QI35_PENMQ Length = 1439 Score = 196 bits (498), Expect = 1e-48 Identities = 98/189 (51%), Positives = 132/189 (69%), Gaps = 3/189 (1%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W+++ ++ A ++N D L KP R + RLKGK GRFRGNLSGKRVDFSGR Sbjct: 320 MECWDYMTLQIAIYINGDVPGLK--GEAGKPTRSLVSRLKGKQGRFRGNLSGKRVDFSGR 377 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA-NFVETDD 359 TVISPDPNLR+D+V +P VA+ +TYPE VT++N + L V G + +PGA ++ D Sbjct: 378 TVISPDPNLRIDEVAVPELVAKNMTYPEIVTRYNLEYLQKLVRNGINKWPGAKKVIKKDS 437 Query: 360 GNKRFLRYGNRK--KVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHR 533 G L++ + ++K L +G +VERHLVDGD+ L+NRQPSLH++SI+SH KV P+R Sbjct: 438 GLTISLKHSAKSLDTISKQLQIGDLVERHLVDGDIALYNRQPSLHKLSILSHFVKVRPYR 497 Query: 534 TFRFNECVC 560 TFR NECVC Sbjct: 498 TFRMNECVC 506 [187][TOP] >UniRef100_Q8TRB7 DNA-directed RNA polymerase n=1 Tax=Methanosarcina acetivorans RepID=Q8TRB7_METAC Length = 880 Score = 196 bits (498), Expect = 1e-48 Identities = 98/186 (52%), Positives = 129/186 (69%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D WE LQ F ++ + +PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R Sbjct: 264 DLWELLQYHVTTFFDNSVSGIPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 323 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNL +++VG+P+ +ARTLT P VT N ++L V G D +PGAN+V DG Sbjct: 324 TVISPDPNLSINEVGVPMPIARTLTIPAVVTPRNIEQLKVYVRNGEDIHPGANYVFRSDG 383 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + + N+ +A+ L G VER L DGD VLFNRQPSLH++SIM+HS KV+P++TFR Sbjct: 384 RRIKVTNMNKDDLAEKLEFGWTVERQLKDGDTVLFNRQPSLHKMSIMAHSVKVLPNKTFR 443 Query: 543 FNECVC 560 N VC Sbjct: 444 LNPAVC 449 [188][TOP] >UniRef100_B8MLB5 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500 RepID=B8MLB5_TALSN Length = 1441 Score = 196 bits (497), Expect = 1e-48 Identities = 99/189 (52%), Positives = 131/189 (69%), Gaps = 3/189 (1%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 M+ W+++ ++ A ++N D L KP R + RLKGK GRFRGNLSGKRVDFSGR Sbjct: 321 MECWDYMTLQIAIYINGDVPGLK--GEAGKPTRSLVSRLKGKQGRFRGNLSGKRVDFSGR 378 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA-NFVETDD 359 TVISPDPNLR+D+V +P VA+ +TYPE VT++N + L V G + +PGA ++ D Sbjct: 379 TVISPDPNLRIDEVAVPELVAKNMTYPEIVTRYNLEYLRKLVRNGINKWPGAKKVIKKDS 438 Query: 360 GNKRFLRYGNRK--KVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHR 533 G L++ R +A L +G +VERHLVDGD+ L+NRQPSLH++SI+SH KV P+R Sbjct: 439 GLTISLKHSARSLDLIAAQLQIGDLVERHLVDGDIALYNRQPSLHKLSILSHFVKVRPYR 498 Query: 534 TFRFNECVC 560 TFR NECVC Sbjct: 499 TFRMNECVC 507 [189][TOP] >UniRef100_O27125 DNA-directed RNA polymerase subunit A' n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=RPOA1_METTH Length = 870 Score = 196 bits (497), Expect = 1e-48 Identities = 94/186 (50%), Positives = 132/186 (70%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D WE LQ + +++A+ +PP + +PL+ ++QRLKGK GRFR NLSGKRV+FS R Sbjct: 260 DLWELLQYHVTTYFDNEASGVPPARHRSGRPLKTLAQRLKGKEGRFRSNLSGKRVNFSAR 319 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPN+ +++VG+P +AR +T P VT+ N R+ + GPD +PGAN+V DG Sbjct: 320 TVISPDPNISINEVGVPEIIAREVTVPVYVTEWNIDRMREYIENGPDVHPGANYVIRPDG 379 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K + ++ V ++L G +VERHL DGD+VLFNRQPSLHR+S+M+H +V+P++TFR Sbjct: 380 RKIRIYNETKEVVLENLKPGYIVERHLKDGDIVLFNRQPSLHRMSMMAHQVRVLPYKTFR 439 Query: 543 FNECVC 560 N CVC Sbjct: 440 LNLCVC 445 [190][TOP] >UniRef100_Q0W8G9 DNA-directed RNA polymerase n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W8G9_UNCMA Length = 877 Score = 195 bits (496), Expect = 2e-48 Identities = 96/187 (51%), Positives = 133/187 (71%), Gaps = 1/187 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D WE LQ +M++ + +PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R Sbjct: 259 DLWELLQYHVTTYMDNAVSGVPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 318 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNL +++VG+PLR+A+ +T P VT N + + V RG + +PGAN+V+ DG Sbjct: 319 TVISPDPNLSINEVGVPLRIAKEMTVPVTVTPFNIEVVREYVRRGSENHPGANYVKRADG 378 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + + N +++A + +G V+R L DGD+VLFNRQPSLHR+SIMSH +V+PH+TFR Sbjct: 379 RRLKITDKNCEELADQIEVGWKVDRQLKDGDIVLFNRQPSLHRMSIMSHFVRVMPHKTFR 438 Query: 543 FNECVCA 563 N VCA Sbjct: 439 LNPAVCA 445 [191][TOP] >UniRef100_Q464Y7 DNA-directed RNA polymerase n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q464Y7_METBF Length = 880 Score = 194 bits (494), Expect = 3e-48 Identities = 97/186 (52%), Positives = 129/186 (69%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D WE LQ F ++ + +PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R Sbjct: 264 DLWELLQYHVTTFFDNSVSGIPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 323 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNL +++VG+P+ +AR LT P VT N ++L V G D +PGAN+V DG Sbjct: 324 TVISPDPNLSINEVGVPMPIARILTMPSVVTPRNIEQLKIYVRNGEDIHPGANYVLRPDG 383 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + + N+ +A+ L G VER L DGD+VLFNRQPSLH++SIM+HS KV+P++TFR Sbjct: 384 RRIKVTNVNKDDLAEKLEFGWTVERQLKDGDIVLFNRQPSLHKMSIMAHSVKVLPNKTFR 443 Query: 543 FNECVC 560 N VC Sbjct: 444 LNPAVC 449 [192][TOP] >UniRef100_C6A1G0 DNA-directed RNA polymerase n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A1G0_THESM Length = 905 Score = 194 bits (493), Expect = 4e-48 Identities = 93/186 (50%), Positives = 131/186 (70%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ + +++ + +PP + +PL+ ++QRLKGK GRFR NLSGKRV+FS R Sbjct: 270 DLWDLLQYHVTTYFDNETSGIPPAKHKSGRPLKTLAQRLKGKEGRFRKNLSGKRVNFSAR 329 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDP + +++VG+PL VA LT PE+VT N ++L ++ GP+ YPGAN+V G Sbjct: 330 TVISPDPMISINEVGVPLIVAMELTVPEKVTDFNLEKLRKMILNGPEKYPGANYVIDPQG 389 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + L N + +A + +G VERHL++GDVVLFNRQPSLHR+SIM+H +V+P++TFR Sbjct: 390 RRIRLMESNLETIADMIDIGWTVERHLMNGDVVLFNRQPSLHRMSIMAHRVRVMPYKTFR 449 Query: 543 FNECVC 560 N VC Sbjct: 450 LNLAVC 455 [193][TOP] >UniRef100_Q2NEK4 DNA-directed RNA polymerase n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NEK4_METST Length = 873 Score = 194 bits (492), Expect = 5e-48 Identities = 89/186 (47%), Positives = 133/186 (71%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D WE LQ + +++A+ +PP + +PL+ ++QRLKGK GRFR NL+GKRV+FS R Sbjct: 260 DLWELLQYHVTTYFDNEASGVPPARHRSGRPLKTLAQRLKGKEGRFRSNLAGKRVNFSAR 319 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDP L +++VG+P +A+ +T P VT+ N +++ + GPD +PGAN++ DG Sbjct: 320 TVISPDPTLSINEVGVPEMIAKEVTVPIAVTEWNMEKMKEYINNGPDVHPGANYIIRPDG 379 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K + ++ V ++L G +VERH++DGD+VLFNRQPSLHR+S+M+H +V+P++TFR Sbjct: 380 RKIRVYDETKEMVVENLKPGYIVERHIIDGDIVLFNRQPSLHRMSMMAHEVRVLPYKTFR 439 Query: 543 FNECVC 560 N CVC Sbjct: 440 LNLCVC 445 [194][TOP] >UniRef100_A0B558 DNA-directed RNA polymerase n=1 Tax=Methanosaeta thermophila PT RepID=A0B558_METTP Length = 876 Score = 194 bits (492), Expect = 5e-48 Identities = 96/186 (51%), Positives = 131/186 (70%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D WE LQ F+++ + +PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R Sbjct: 260 DLWELLQYHVTTFLDNTVSGVPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 319 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISP PNL +++VG+P+ VA+ LT P VT N + + V+RGPD +PG N+V DG Sbjct: 320 TVISPYPNLSINEVGVPIEVAKELTVPIMVTPKNIEVVRKYVMRGPDNHPGVNYVTRADG 379 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + + N ++VA+ L +G V+R L DGD+VLFNRQPSLHR+SIM+H KV+P++TFR Sbjct: 380 RRVKVTERNCQEVAEQLEVGWKVDRQLADGDIVLFNRQPSLHRMSIMAHRVKVMPYKTFR 439 Query: 543 FNECVC 560 N VC Sbjct: 440 LNPAVC 445 [195][TOP] >UniRef100_Q8PUR1 DNA-directed RNA polymerase n=1 Tax=Methanosarcina mazei RepID=Q8PUR1_METMA Length = 880 Score = 193 bits (491), Expect = 7e-48 Identities = 96/186 (51%), Positives = 129/186 (69%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D WE LQ F ++ + +PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R Sbjct: 264 DLWELLQYHVTTFFDNSVSGIPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 323 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPNL +++VG+P+ +A+ LT P VT N ++L V G D +PGAN+V DG Sbjct: 324 TVISPDPNLSINEVGVPMPIAKILTMPAVVTPRNIEQLKVYVRNGEDIHPGANYVFRSDG 383 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + + N++ +A+ L G VER L DGD VLFNRQPSLH++SIM+HS KV+P++TFR Sbjct: 384 RRIKVTNMNKEDLAEKLEFGWTVERQLKDGDTVLFNRQPSLHKMSIMAHSVKVLPNKTFR 443 Query: 543 FNECVC 560 N VC Sbjct: 444 LNPAVC 449 [196][TOP] >UniRef100_P09846 DNA-directed RNA polymerase subunit A' n=1 Tax=Methanothermobacter thermautotrophicus str. Winter RepID=RPOA1_METTW Length = 865 Score = 192 bits (489), Expect = 1e-47 Identities = 93/186 (50%), Positives = 130/186 (69%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D WE LQ + +++A+ +PP + +PL+ ++QRLKGK GRFR NLSGKRV+FS R Sbjct: 260 DLWELLQYHVTTYFDNEASGVPPARHRSGRPLKTLAQRLKGKEGRFRSNLSGKRVNFSAR 319 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TV+SPDPN+ V++VG+P +A+ +T P VT+ N R+ + GPD +PGAN+V DG Sbjct: 320 TVVSPDPNVSVNEVGVPELIAKEVTVPVYVTEWNIDRMKEHIENGPDVHPGANYVIRPDG 379 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K + V ++L G +VERHL DGD+VLFNRQPSLHR+S+M+H +V+P++TFR Sbjct: 380 RKIRAYNETKDVVLENLKPGYIVERHLKDGDIVLFNRQPSLHRMSMMAHEVRVLPYKTFR 439 Query: 543 FNECVC 560 N CVC Sbjct: 440 LNLCVC 445 [197][TOP] >UniRef100_A9BK83 DNA-directed RNA polymerase n=1 Tax=Cryptophyta RepID=A9BK83_9CRYP Length = 1323 Score = 192 bits (487), Expect = 2e-47 Identities = 93/185 (50%), Positives = 129/185 (69%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185 D W LQ+E +++NS+A NL S + + + RLKGK GRFRGNLSGKRV+FSGRT Sbjct: 289 DTWSILQIECGKYLNSEAFNLE---SGKQKFKSLFNRLKGKNGRFRGNLSGKRVNFSGRT 345 Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365 VISPDPNL ++ +G+P+ +A LT+PERV K N +RL V+RG +PGANF+ N Sbjct: 346 VISPDPNLPLNFLGLPIILATKLTFPERVNKFNIERLQRTVLRGATRFPGANFLIDLKNN 405 Query: 366 KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545 K+ + ++KK ++ G +ERHL + D++LFNRQPSLHRISIM+H K++ +T + Sbjct: 406 KKHIENLSKKKEHLEIKSGYKIERHLKNNDIILFNRQPSLHRISIMAHRTKIISGKTLKI 465 Query: 546 NECVC 560 NEC+C Sbjct: 466 NECIC 470 [198][TOP] >UniRef100_A9A9V0 DNA-directed RNA polymerase n=1 Tax=Methanococcus maripaludis C6 RepID=A9A9V0_METM6 Length = 889 Score = 191 bits (486), Expect = 3e-47 Identities = 97/194 (50%), Positives = 135/194 (69%), Gaps = 9/194 (4%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ + +++A +PP + +PLR ++QRLKGK GRFR NL+GKRV+FS R Sbjct: 267 DLWDLLQYHINTYFDNEAPGIPPARHRSGRPLRTLAQRLKGKEGRFRHNLAGKRVNFSAR 326 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF----VE 350 TVISPDP L +++VGIP +A+ LT PE+VT +N +R+ A + G DT+PG N+ V+ Sbjct: 327 TVISPDPRLSINEVGIPKLIAKELTVPEKVTPYNIERVRALLRNGADTHPGVNYVIKKVK 386 Query: 351 TDDGNKRFLRY----GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518 T DG + + N++ +++ G V+ERHL DGDVVL+NRQPSLHR+SIM+H K Sbjct: 387 TKDGKEEEYKIKITDANKEMWVENITDGMVIERHLSDGDVVLYNRQPSLHRMSIMAHKVK 446 Query: 519 VVPHRTFRFNECVC 560 V+P+RTFR N CVC Sbjct: 447 VLPYRTFRHNLCVC 460 [199][TOP] >UniRef100_Q2PYR9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Conidiobolus coronatus RepID=Q2PYR9_9FUNG Length = 749 Score = 191 bits (484), Expect = 4e-47 Identities = 95/179 (53%), Positives = 126/179 (70%), Gaps = 1/179 (0%) Frame = +3 Query: 15 EWLQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191 ++LQ A +M++D LP L + +P++ I RLKGK GR RGNL GKRVDFS RTVI Sbjct: 224 QYLQYHVATYMDNDIAGLPQSLQKSGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVI 283 Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKR 371 + DPNL +DQVG+P +AR LTYPERVT +N +RL AV GP+ +PGA +V D G + Sbjct: 284 TGDPNLSIDQVGVPRSIARNLTYPERVTPYNIQRLREAVRNGPNVHPGAKYVIRDTGERI 343 Query: 372 FLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 LR+ R+ L +G +VERH++D DVV+FNRQPSLH++S+M H KV+P+ TFR N Sbjct: 344 DLRH-YRRNAEVPLMVGYIVERHIIDNDVVIFNRQPSLHKMSMMGHLIKVMPYSTFRLN 401 [200][TOP] >UniRef100_A6VGU9 DNA-directed RNA polymerase n=1 Tax=Methanococcus maripaludis C7 RepID=A6VGU9_METM7 Length = 889 Score = 191 bits (484), Expect = 4e-47 Identities = 97/194 (50%), Positives = 134/194 (69%), Gaps = 9/194 (4%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ + +++A +PP + +PLR ++QRLKGK GRFR NL+GKRV+FS R Sbjct: 267 DLWDLLQYHINTYFDNEAPGIPPARHRSGRPLRTLAQRLKGKEGRFRHNLAGKRVNFSAR 326 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF----VE 350 TVISPDP L +++VGIP +A+ LT PE+VT +N +R+ A + G DT+PG N+ V+ Sbjct: 327 TVISPDPRLSINEVGIPKLIAKELTVPEKVTPYNIERVRALLRNGADTHPGVNYVIKKVK 386 Query: 351 TDDGNKRFLRY----GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518 T DG + + N+ +++ G V+ERHL DGDVVL+NRQPSLHR+SIM+H K Sbjct: 387 TKDGKEEEYKIKITDANKDMWVENITDGMVIERHLSDGDVVLYNRQPSLHRMSIMAHKVK 446 Query: 519 VVPHRTFRFNECVC 560 V+P+RTFR N CVC Sbjct: 447 VLPYRTFRHNLCVC 460 [201][TOP] >UniRef100_A6UV50 DNA-directed RNA polymerase n=1 Tax=Methanococcus aeolicus Nankai-3 RepID=A6UV50_META3 Length = 888 Score = 190 bits (482), Expect = 7e-47 Identities = 96/194 (49%), Positives = 133/194 (68%), Gaps = 9/194 (4%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ + +++A PP + +PLR I+QRLKGK GRFR NL+GKRV+FS R Sbjct: 267 DLWDLLQYHINTYFDNEAPGTPPARHRSGRPLRTIAQRLKGKEGRFRHNLAGKRVNFSAR 326 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF----VE 350 TVISPDP L +++VGIP ++A+ LT PE+VTK+N ++ + G D +PG N+ V+ Sbjct: 327 TVISPDPRLSINEVGIPKQIAKELTIPEKVTKYNIDKIRELIANGADNHPGVNYLIKKVK 386 Query: 351 TDDGNKRFLRYGNRKKV----AKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518 T DG + + KV ++ + G +VERHL+DGD+VL+NRQPSLHR+SIM+H K Sbjct: 387 TRDGKEEEYKIKITDKVKELWSEKVEEGMIVERHLIDGDIVLYNRQPSLHRMSIMAHRVK 446 Query: 519 VVPHRTFRFNECVC 560 V+P+RTFR N CVC Sbjct: 447 VLPYRTFRHNLCVC 460 [202][TOP] >UniRef100_A8Q5I6 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q5I6_MALGO Length = 1607 Score = 189 bits (479), Expect = 2e-46 Identities = 97/177 (54%), Positives = 123/177 (69%), Gaps = 1/177 (0%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A +M++D LP L S+ +P++ I RLKGK GR RGNL GKRVDFS RTVI+ Sbjct: 103 LQYHTATYMDNDIAGLPQSLQSSGRPVKAIRARLKGKEGRLRGNLMGKRVDFSARTVITG 162 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNL +DQVG+P +AR LTYPERVT +NR L+ V GP+ YPGA +V D G + L Sbjct: 163 DPNLELDQVGVPKSIARNLTYPERVTPYNRAYLSDLVRNGPNEYPGARYVIRDTGERIDL 222 Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 +Y R +A L G +VERHL DGD VLFNRQPSLH++S+M+H K++ + TFR N Sbjct: 223 KYNRRGDIA--LQAGWIVERHLRDGDYVLFNRQPSLHKMSMMAHRVKLMDYSTFRLN 277 [203][TOP] >UniRef100_Q22M85 DNA-directed RNA polymerase n=1 Tax=Tetrahymena thermophila SB210 RepID=Q22M85_TETTH Length = 1418 Score = 188 bits (478), Expect = 2e-46 Identities = 95/188 (50%), Positives = 128/188 (68%), Gaps = 4/188 (2%) Frame = +3 Query: 12 WEWLQVEAARFMNSDATNLPPLAST---AKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 W LQ A ++N++ NLP K +R ++QRLKGK GRFRGNLSGKR +F+GR Sbjct: 258 WFLLQCSHAHYLNAETPNLPFKMDKDFGKKDIRALAQRLKGKKGRFRGNLSGKRSNFTGR 317 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPN+ +D V +P +A+ LT+PE+V N +RL VI GP+ YPGA+++ D Sbjct: 318 TVISPDPNIPIDNVVVPEYMAKILTFPEQVNAINIERLKKLVINGPEKYPGAHYIIAKDT 377 Query: 363 NKRF-LRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539 +F L NR+K A +L +G +VERH+ +G+++LFNRQPSLHRISIM+ A + T Sbjct: 378 EDKFNLSIDNRRKKADELKIGDIVERHIQNGEILLFNRQPSLHRISIMAFKANIQKWNTI 437 Query: 540 RFNECVCA 563 RFNEC CA Sbjct: 438 RFNECCCA 445 [204][TOP] >UniRef100_P41556 DNA-directed RNA polymerase subunit A' n=1 Tax=Methanococcus vannielii SB RepID=RPOA1_METVS Length = 889 Score = 188 bits (478), Expect = 2e-46 Identities = 97/194 (50%), Positives = 133/194 (68%), Gaps = 9/194 (4%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ + +++A +PP + +PLR ++QRLKGK GRFR NL+GKRV+FS R Sbjct: 267 DLWDLLQYHINTYFDNEAPGIPPARHRSGRPLRTLAQRLKGKEGRFRHNLAGKRVNFSAR 326 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF----VE 350 TVISPDP L +++VGIP +A+ LT PE+VT +N +R+ + G D +PG N+ V+ Sbjct: 327 TVISPDPRLSINEVGIPELIAKELTVPEKVTPYNIERIRKLIENGSDKHPGVNYVIKKVK 386 Query: 351 TDDGNKRFLRY----GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518 T DG + + N+K +++ G VVERHL DGDVVL+NRQPSLHR+SIM+H K Sbjct: 387 TKDGKEEEYKIKITDTNKKMWVENIVDGMVVERHLGDGDVVLYNRQPSLHRMSIMAHKVK 446 Query: 519 VVPHRTFRFNECVC 560 V+P+RTFR N CVC Sbjct: 447 VLPYRTFRHNLCVC 460 [205][TOP] >UniRef100_O04142 DNA-directed RNA polymerase (Fragment) n=1 Tax=Porphyra yezoensis RepID=O04142_PORYE Length = 1685 Score = 188 bits (477), Expect = 3e-46 Identities = 93/177 (52%), Positives = 122/177 (68%), Gaps = 1/177 (0%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A +MN+D +P A + +PL+ ISQRLKGK GR RGNL GKRVDFS RTVI+P Sbjct: 222 LQFHVATYMNNDLPGMPRAAQKSGRPLKSISQRLKGKEGRLRGNLMGKRVDFSARTVITP 281 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNLR+DQVG+P +A+ LT+PE VT +N + + V GPD YP A +++ DDG + L Sbjct: 282 DPNLRLDQVGVPFSIAKNLTFPETVTAYNIEEMQQLVENGPDEYPDAKYIQRDDGYQVNL 341 Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 Y R + L +G V RH+ +GD ++FNRQPSLH++SIM H KV+P+ TFR N Sbjct: 342 AY-VRNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLN 397 [206][TOP] >UniRef100_Q18EX6 DNA-directed RNA polymerase n=1 Tax=Haloquadratum walsbyi DSM 16790 RepID=Q18EX6_HALWD Length = 978 Score = 188 bits (477), Expect = 3e-46 Identities = 93/186 (50%), Positives = 128/186 (68%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D WE LQ F++++ + PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R Sbjct: 336 DLWELLQYHVTTFIDNEISGTPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 395 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDP L +++VG+P RVAR +T VT N R V GP+ +PGAN+V+ DG Sbjct: 396 TVISPDPTLSLNEVGVPERVAREMTQTMNVTARNVDRAQQYVRNGPEGHPGANYVKRPDG 455 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + + N +++A+ + G V RHL+DGD+V+FNRQPSLHR+SIM+H V+P++TFR Sbjct: 456 RRLKVTEKNCEELAEKIDAGWEVNRHLIDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFR 515 Query: 543 FNECVC 560 N VC Sbjct: 516 LNTVVC 521 [207][TOP] >UniRef100_C1V769 DNA-directed RNA polymerase n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1V769_9EURY Length = 978 Score = 188 bits (477), Expect = 3e-46 Identities = 92/186 (49%), Positives = 130/186 (69%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D WE LQ F++++ + PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R Sbjct: 336 DLWELLQYHVTTFIDNEISGTPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 395 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDP L +++VG+P RVAR +T VT+ N ++ V GP+ +PGAN+V+ DG Sbjct: 396 TVISPDPTLSLNEVGVPERVAREMTQTMNVTERNLEQAQQYVRNGPEGHPGANYVKRPDG 455 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + + N +++A+ + G V RHL+DGD+V+FNRQPSLHR+SIM+H V+P++TFR Sbjct: 456 RRLKVTEKNCEELAEKVQAGWEVNRHLIDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFR 515 Query: 543 FNECVC 560 N VC Sbjct: 516 LNTVVC 521 [208][TOP] >UniRef100_B3T842 DNA-directed RNA polymerase (Fragment) n=1 Tax=uncultured marine crenarchaeote HF4000_APKG4H17 RepID=B3T842_9ARCH Length = 993 Score = 187 bits (476), Expect = 4e-46 Identities = 95/182 (52%), Positives = 130/182 (71%), Gaps = 2/182 (1%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ + +++ + +P + +PL+ ++QRLKGK GRFRG+LSGKRVDFS RTVISP Sbjct: 1 LQYHTTTYFDNEVSGIPQAHHRSGRPLKTLTQRLKGKEGRFRGSLSGKRVDFSSRTVISP 60 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNL + +VG+P++VA LT PE VT+ N ++L VI GPDT+PG N++ DG K L Sbjct: 61 DPNLDLGEVGVPVQVATKLTIPEIVTEWNIEKLKKLVINGPDTFPGVNYIVRPDGVKIRL 120 Query: 378 RY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFNEC 554 + +R +A L +G +VERHL DGDVVLFNRQPSLH++SIM+H +V+P +TFR + Sbjct: 121 DFVEDRSIIADSLEIGYLVERHLSDGDVVLFNRQPSLHQMSIMAHHVRVLPGKTFRLHPS 180 Query: 555 VC 560 VC Sbjct: 181 VC 182 [209][TOP] >UniRef100_Q6LXI8 DNA-directed RNA polymerase n=1 Tax=Methanococcus maripaludis RepID=Q6LXI8_METMP Length = 889 Score = 187 bits (474), Expect = 6e-46 Identities = 94/194 (48%), Positives = 132/194 (68%), Gaps = 9/194 (4%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ + +++A +PP + +PLR ++QRLKGK GRFR NL+GKRV+FS R Sbjct: 267 DLWDLLQYHINTYFDNEAPGIPPARHRSGRPLRTLAQRLKGKEGRFRHNLAGKRVNFSAR 326 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF----VE 350 TVISPDP L +++VGIP +A+ LT PE+VT +N +++ A + G D +PG N+ V Sbjct: 327 TVISPDPRLSINEVGIPKLIAKELTVPEKVTPYNIEKVRALLRNGSDNHPGVNYVVKKVR 386 Query: 351 TDDGNKRFLRY----GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518 T DG + + N+ +++ G V+ERHL DGD+VL+NRQPSLHR+SIM+H K Sbjct: 387 TKDGKEEEYKIKITDANKDMWVENITDGMVIERHLSDGDIVLYNRQPSLHRMSIMAHKVK 446 Query: 519 VVPHRTFRFNECVC 560 V+P+RTFR N CVC Sbjct: 447 VLPYRTFRHNLCVC 460 [210][TOP] >UniRef100_A5ULN6 DNA-directed RNA polymerase n=1 Tax=Methanobrevibacter smithii ATCC 35061 RepID=A5ULN6_METS3 Length = 894 Score = 187 bits (474), Expect = 6e-46 Identities = 88/186 (47%), Positives = 127/186 (68%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D WE LQ + +++A+ +PP + +PL+ ++QRLKGK GRFR NLSGKRV+FS R Sbjct: 264 DLWELLQYHVTTYFDNEASGVPPARHRSGRPLKTLAQRLKGKEGRFRSNLSGKRVNFSAR 323 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPN+ +++VG+P +A+ +T P V N + + GP+ +PGAN+V DG Sbjct: 324 TVISPDPNISINEVGVPEMIAKEVTVPAYVNDWNMDEMRTYIENGPNVHPGANYVIRTDG 383 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K + + + + L G ++ERHL DGD+VLFNRQPSLHR+S+M+H +V+P++TFR Sbjct: 384 RKIRVYDETKDMILEKLEPGYIIERHLKDGDMVLFNRQPSLHRMSMMAHEVRVLPYKTFR 443 Query: 543 FNECVC 560 N CVC Sbjct: 444 LNLCVC 449 [211][TOP] >UniRef100_B9AEP6 DNA-directed RNA polymerase n=1 Tax=Methanobrevibacter smithii DSM 2375 RepID=B9AEP6_METSM Length = 894 Score = 187 bits (474), Expect = 6e-46 Identities = 88/186 (47%), Positives = 127/186 (68%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D WE LQ + +++A+ +PP + +PL+ ++QRLKGK GRFR NLSGKRV+FS R Sbjct: 264 DLWELLQYHVTTYFDNEASGVPPARHRSGRPLKTLAQRLKGKEGRFRSNLSGKRVNFSAR 323 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDPN+ +++VG+P +A+ +T P V N + + GP+ +PGAN+V DG Sbjct: 324 TVISPDPNISINEVGVPEMIAKEVTVPAYVNDWNMDEMRTYIENGPNVHPGANYVIRTDG 383 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 K + + + + L G ++ERHL DGD+VLFNRQPSLHR+S+M+H +V+P++TFR Sbjct: 384 RKIRVYDETKDMILEKLEPGYIIERHLKDGDMVLFNRQPSLHRMSMMAHEVRVLPYKTFR 443 Query: 543 FNECVC 560 N CVC Sbjct: 444 LNLCVC 449 [212][TOP] >UniRef100_B5IH61 DNA-directed RNA polymerase (Fragment) n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IH61_9EURY Length = 661 Score = 187 bits (474), Expect = 6e-46 Identities = 99/191 (51%), Positives = 130/191 (68%), Gaps = 6/191 (3%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D WE LQ + ++ + +PP + +PL+ + QRLKGK GRFR NLSGKRV+FS R Sbjct: 211 DLWELLQYHVTTYFDNQTSGIPPARHRSGRPLKTLVQRLKGKEGRFRSNLSGKRVNFSAR 270 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGP----DTY-PGANFV 347 TVISP+P L +++VG+P AR LT P VT++N +++ V RG D Y PGAN+V Sbjct: 271 TVISPEPFLSINEVGVPEAAARELTVPITVTEYNIEKMKEIVRRGSNPKGDKYLPGANYV 330 Query: 348 ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVP 527 DG + + N + V+K L +G VVERHL+DGDVVLFNRQPSLHR+S+M H KV+P Sbjct: 331 IRPDGRRIKITDRNAEDVSKKLDIGWVVERHLIDGDVVLFNRQPSLHRMSMMGHLVKVMP 390 Query: 528 HRTFRFNECVC 560 +RTFRFN VC Sbjct: 391 NRTFRFNLAVC 401 [213][TOP] >UniRef100_B5IGJ6 DNA-directed RNA polymerase n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IGJ6_9EURY Length = 895 Score = 187 bits (474), Expect = 6e-46 Identities = 99/191 (51%), Positives = 130/191 (68%), Gaps = 6/191 (3%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D WE LQ + ++ + +PP + +PL+ + QRLKGK GRFR NLSGKRV+FS R Sbjct: 268 DLWELLQYHVTTYFDNQTSGIPPARHRSGRPLKTLVQRLKGKEGRFRSNLSGKRVNFSAR 327 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGP----DTY-PGANFV 347 TVISP+P L +++VG+P AR LT P VT++N +++ V RG D Y PGAN+V Sbjct: 328 TVISPEPFLSINEVGVPEAAARELTVPITVTEYNIEKMKEIVRRGSNPKGDKYLPGANYV 387 Query: 348 ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVP 527 DG + + N + V+K L +G VVERHL+DGDVVLFNRQPSLHR+S+M H KV+P Sbjct: 388 IRPDGRRIKITDRNAEDVSKKLDIGWVVERHLIDGDVVLFNRQPSLHRMSMMGHLVKVMP 447 Query: 528 HRTFRFNECVC 560 +RTFRFN VC Sbjct: 448 NRTFRFNLAVC 458 [214][TOP] >UniRef100_A8MAA2 DNA-directed RNA polymerase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MAA2_CALMQ Length = 889 Score = 186 bits (472), Expect = 1e-45 Identities = 94/188 (50%), Positives = 134/188 (71%), Gaps = 2/188 (1%) Frame = +3 Query: 3 MDGWEWLQVEAARFMNSDATN-LPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSG 179 +D W+ LQ A +++++ + + +PL+GI+QRLKGK GRFRG+LSGKRV+FS Sbjct: 276 LDLWDSLQANVATYIDNELPGGIQARHRSKRPLKGIAQRLKGKEGRFRGSLSGKRVEFSA 335 Query: 180 RTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDD 359 RTVISPDPNL +++VG+P+ +A+ LT E VT+ N + V+ GP+T+PGAN V T D Sbjct: 336 RTVISPDPNLSINEVGVPIDIAKELTVVEPVTEWNIDLMRMLVVNGPETWPGANRVITPD 395 Query: 360 GNKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536 G K L+ +R ++A+ + G ++ERHL+DGD VLFNRQPSLH++S+M H KV+P RT Sbjct: 396 GKKIELKVRRDRSELAQQIQPGWMIERHLMDGDYVLFNRQPSLHKMSMMCHIVKVLPGRT 455 Query: 537 FRFNECVC 560 FR + VC Sbjct: 456 FRLHLAVC 463 [215][TOP] >UniRef100_Q2PYR6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coemansia reversa RepID=Q2PYR6_9FUNG Length = 1013 Score = 186 bits (471), Expect = 1e-45 Identities = 94/177 (53%), Positives = 124/177 (70%), Gaps = 1/177 (0%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A FMN++A+ +P L + +P++ I RLKGK GR RGNL GKRVDFS RTVI+ Sbjct: 228 LQFHTAAFMNNEASGMPQALQKSGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVITG 287 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPN+ +DQVG+P +AR LTYPE VT +N RL V G D YPGA FV D+G + L Sbjct: 288 DPNISIDQVGVPRSIARNLTYPETVTPYNIDRLQEYVRNGRDAYPGAKFVVRDNGEQINL 347 Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 +Y N+++ L +G VER+L+D DV++FNRQPSLH++S+M H KV+P+ TFR N Sbjct: 348 QY-NKQRGDFPLQIGYRVERNLIDDDVIIFNRQPSLHKMSMMGHRVKVMPYSTFRLN 403 [216][TOP] >UniRef100_Q5UZR4 DNA-directed RNA polymerase n=1 Tax=Haloarcula marismortui RepID=Q5UZR4_HALMA Length = 969 Score = 186 bits (471), Expect = 1e-45 Identities = 91/186 (48%), Positives = 128/186 (68%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D WE LQ FM+++ + PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R Sbjct: 332 DLWELLQYHVTTFMDNEISGTPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 391 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDP L +++VG+P RVA+ +T VT+ N + V GP+ +PGAN+V+ DG Sbjct: 392 TVISPDPTLSLNEVGVPDRVAKEMTQTMNVTERNLEEARRYVSNGPEAHPGANYVKRPDG 451 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + + N +++A+ + V RHLVDGD+++FNRQPSLHR+SIM+H V+P++TFR Sbjct: 452 RRLKVTEKNCEELAEKVEAEWEVSRHLVDGDIIIFNRQPSLHRMSIMAHEVVVMPYKTFR 511 Query: 543 FNECVC 560 N VC Sbjct: 512 LNTTVC 517 [217][TOP] >UniRef100_A4FWF6 DNA-directed RNA polymerase n=1 Tax=Methanococcus maripaludis C5 RepID=A4FWF6_METM5 Length = 889 Score = 186 bits (471), Expect = 1e-45 Identities = 94/194 (48%), Positives = 132/194 (68%), Gaps = 9/194 (4%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ + +++A +PP + +PLR ++QRLKGK GRFR NL+GKRV+FS R Sbjct: 267 DLWDLLQYHINTYFDNEAPGIPPARHRSGRPLRTLAQRLKGKEGRFRHNLAGKRVNFSAR 326 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF----VE 350 TVISPDP L +++VGIP +A+ LT PE+VT +N +++ + G DT+PG N+ V Sbjct: 327 TVISPDPRLSINEVGIPKLIAKELTVPEKVTPYNIEKVRTLLRNGADTHPGVNYVVKKVR 386 Query: 351 TDDGNKRFLRY----GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518 T DG + + N+ +++ G VVERHL +GD+VL+NRQPSLHR+SIM+H K Sbjct: 387 TKDGKEEEYKIKITDANKDMWVENITDGMVVERHLSNGDIVLYNRQPSLHRMSIMAHKVK 446 Query: 519 VVPHRTFRFNECVC 560 V+P+RTFR N CVC Sbjct: 447 VLPYRTFRHNLCVC 460 [218][TOP] >UniRef100_Q2PYS8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rozella allomycis RepID=Q2PYS8_9FUNG Length = 809 Score = 185 bits (470), Expect = 2e-45 Identities = 97/177 (54%), Positives = 121/177 (68%), Gaps = 1/177 (0%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A +M + LP + + +PL+ IS RLKGK GR RGNL GKRVDFS RTVI+P Sbjct: 30 LQFHVATYMENSIPGLPKAIQKSGRPLKSISARLKGKEGRLRGNLMGKRVDFSARTVITP 89 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNL +DQVG+P +A+TLTYPE VT +N + L V GP +PGA +V DDGN+ L Sbjct: 90 DPNLSLDQVGVPRTIAKTLTYPEIVTPYNIEYLQKLVNNGPTEHPGARYVVRDDGNRIDL 149 Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 R+ K L G +VERH+ DGDVVLFNRQPSLH++S+M H KV+P+ TFR N Sbjct: 150 RF----KTDVVLQPGYLVERHINDGDVVLFNRQPSLHKMSMMGHRIKVMPYSTFRLN 202 [219][TOP] >UniRef100_C4Y5N4 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y5N4_CLAL4 Length = 1402 Score = 185 bits (470), Expect = 2e-45 Identities = 100/179 (55%), Positives = 123/179 (68%), Gaps = 3/179 (1%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A +M++D P L T +P++ I RLKGK GR RGNL GKRVDFS RTVIS Sbjct: 255 LQFHVATYMDNDIAGQPQALQKTGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVISG 314 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNL +DQVG+PL +ARTLTYPE VT +N RL V GP+ +PGA +V D G++ L Sbjct: 315 DPNLDLDQVGVPLSIARTLTYPEIVTPYNIHRLTEYVRNGPNEHPGAKYVIRDTGDRIDL 374 Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 RY R A D+ L G VERHL+D D VLFNRQPSLH++S+M+H KV+P+ TFR N Sbjct: 375 RYNKR---AGDIALQYGWKVERHLMDDDPVLFNRQPSLHKMSMMAHRVKVMPYSTFRLN 430 [220][TOP] >UniRef100_B9Z9B0 DNA-directed RNA polymerase n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9Z9B0_NATMA Length = 976 Score = 185 bits (470), Expect = 2e-45 Identities = 92/186 (49%), Positives = 126/186 (67%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D WE LQ FM+++ + PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R Sbjct: 335 DLWELLQYHVTTFMDNEISGTPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 394 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDP L +++VG+P RVA+ +T VT N + V GP+ +PGAN+V DG Sbjct: 395 TVISPDPTLSLNEVGVPDRVAKEMTQTMNVTDRNVEEARRYVSNGPEGHPGANYVRRPDG 454 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + + N + +A+ + G V RH+VDGD+V+FNRQPSLHR+SIM+H V+P++TFR Sbjct: 455 RRLKVTEKNCEALAEKVDAGWEVNRHMVDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFR 514 Query: 543 FNECVC 560 N VC Sbjct: 515 LNTVVC 520 [221][TOP] >UniRef100_C4QF52 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni RepID=C4QF52_SCHMA Length = 1342 Score = 185 bits (469), Expect = 2e-45 Identities = 103/196 (52%), Positives = 125/196 (63%), Gaps = 16/196 (8%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISPD 200 L E AR +NS + LPP+ K +RG+ QRL GK GRFRG+L GKR +F+ RTVISPD Sbjct: 309 LHAEFARLINSQQSGLPPVQDH-KFMRGLLQRLAGKHGRFRGSLLGKRTNFTARTVISPD 367 Query: 201 PNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVE---------- 350 PN+R+D+V IP+ A+ LTYPERVT N L + V+ GP+ YPGA FV Sbjct: 368 PNMRIDEVCIPVHCAKLLTYPERVTDFNLNFLRSLVLNGPNNYPGAMFVSYKLRGERKRQ 427 Query: 351 -----TDDGNKRFLRYGN-RKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHS 512 D KRFL R+ VAK L G +VERHL+D D+VLFNRQPSLHR+SI + Sbjct: 428 AEASGNSDVVKRFLASERAREDVAKYLQSGDIVERHLLDDDIVLFNRQPSLHRVSIQAFR 487 Query: 513 AKVVPHRTFRFNECVC 560 A V P RTFRFN C C Sbjct: 488 AVVKPFRTFRFNPCCC 503 [222][TOP] >UniRef100_A0RXW9 DNA-directed RNA polymerase n=1 Tax=Cenarchaeum symbiosum RepID=A0RXW9_CENSY Length = 1260 Score = 185 bits (469), Expect = 2e-45 Identities = 92/182 (50%), Positives = 128/182 (70%), Gaps = 2/182 (1%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A + +++ + +P + +PL+ ++QRLKGK GRFRG+LSGKRVDFS RTVISP Sbjct: 272 LQYHATTYFDNEISGIPQAHHRSGRPLKTLTQRLKGKEGRFRGSLSGKRVDFSSRTVISP 331 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNL + +VG+P VA LT PE VT+ N R+ V+ GPD YPG N++ DG K L Sbjct: 332 DPNLDLSEVGVPESVAMKLTIPEIVTEWNIARMKELVVNGPDHYPGVNYIVRPDGVKIRL 391 Query: 378 RY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFNEC 554 + +R +A L +G ++ERHL+DGD+V+FNRQPSLH++SIM+H +V+P +TFR + Sbjct: 392 DFVEDRSTIADTLEMGYLIERHLLDGDIVMFNRQPSLHQMSIMAHHVRVLPGKTFRLHPS 451 Query: 555 VC 560 VC Sbjct: 452 VC 453 [223][TOP] >UniRef100_Q5S1Y0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Boletellus projectellus RepID=Q5S1Y0_9HOMO Length = 997 Score = 184 bits (468), Expect = 3e-45 Identities = 95/177 (53%), Positives = 119/177 (67%), Gaps = 1/177 (0%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A +M++D +P L + +P++ I RLKGK GR RGNL GKRVDFS RTVI+ Sbjct: 212 LQFHVATYMDNDIAGIPQALQKSGRPVKAIRARLKGKEGRLRGNLMGKRVDFSARTVITG 271 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNL +D+VG+P +A LTYPERVT +N L V GP TYPGA +V D G + L Sbjct: 272 DPNLELDEVGVPRSIAMNLTYPERVTPYNIAYLQELVRNGPSTYPGARYVVRDTGERIDL 331 Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 RY K+ L G +VERHL DGD VLFNRQPSLH++S+MSH K++P+ TFR N Sbjct: 332 RY--NKRADAFLQYGWIVERHLKDGDFVLFNRQPSLHKMSMMSHRVKLMPYSTFRLN 386 [224][TOP] >UniRef100_C7NYI6 DNA-directed RNA polymerase subunit A' n=1 Tax=Halomicrobium mukohataei DSM 12286 RepID=C7NYI6_HALMD Length = 972 Score = 184 bits (468), Expect = 3e-45 Identities = 89/186 (47%), Positives = 127/186 (68%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D WE LQ FM+++ + PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R Sbjct: 336 DLWELLQYHVTTFMDNEISGTPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 395 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDP L +++VG+P RVA+ +T V + N V GP+ +PGAN+V+ DG Sbjct: 396 TVISPDPTLSLNEVGVPDRVAKEMTQTMNVNERNLDNARRYVANGPEAHPGANYVKRPDG 455 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + + N +++A+ + G V RH++DGD+++FNRQPSLHR+SIM+H V+P++TFR Sbjct: 456 RRLKVTEKNCEELAEKVEPGWEVSRHMIDGDIIIFNRQPSLHRMSIMAHEVVVMPYKTFR 515 Query: 543 FNECVC 560 N VC Sbjct: 516 LNTTVC 521 [225][TOP] >UniRef100_UPI0001B119CD RNA polymerase alpha subunit n=1 Tax=Methanocaldococcus vulcanius M7 RepID=UPI0001B119CD Length = 1234 Score = 184 bits (467), Expect = 4e-45 Identities = 93/194 (47%), Positives = 134/194 (69%), Gaps = 9/194 (4%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W LQ + +++A +PP + +PL+ ++QRLKGK GRFR NL+GKRV+FS R Sbjct: 160 DLWNLLQYHINTYFDNEAPGIPPAKHRSGRPLKTLAQRLKGKEGRFRYNLAGKRVNFSSR 219 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV----- 347 TVISPDP L V++VG+P +A+ LT PE+VTK+N +R+ + G + +PG N+V Sbjct: 220 TVISPDPCLSVNEVGVPEIIAKELTVPEKVTKYNIERIRKLLRNGSEKHPGVNYVIRKMI 279 Query: 348 ---ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518 T+ K + GN++ A+++ G +VERHL+DGD+VL+NRQPSLHR+SIM+H + Sbjct: 280 GRDGTEQEYKVKVTEGNKEFWAENIKEGDIVERHLMDGDIVLYNRQPSLHRMSIMAHRVR 339 Query: 519 VVPHRTFRFNECVC 560 V+P+RTFR N CVC Sbjct: 340 VLPYRTFRHNLCVC 353 [226][TOP] >UniRef100_C9RDK8 DNA-directed RNA polymerase subunit A' n=1 Tax=Methanocaldococcus vulcanius M7 RepID=C9RDK8_9EURY Length = 1343 Score = 184 bits (467), Expect = 4e-45 Identities = 93/194 (47%), Positives = 134/194 (69%), Gaps = 9/194 (4%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W LQ + +++A +PP + +PL+ ++QRLKGK GRFR NL+GKRV+FS R Sbjct: 269 DLWNLLQYHINTYFDNEAPGIPPAKHRSGRPLKTLAQRLKGKEGRFRYNLAGKRVNFSSR 328 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV----- 347 TVISPDP L V++VG+P +A+ LT PE+VTK+N +R+ + G + +PG N+V Sbjct: 329 TVISPDPCLSVNEVGVPEIIAKELTVPEKVTKYNIERIRKLLRNGSEKHPGVNYVIRKMI 388 Query: 348 ---ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518 T+ K + GN++ A+++ G +VERHL+DGD+VL+NRQPSLHR+SIM+H + Sbjct: 389 GRDGTEQEYKVKVTEGNKEFWAENIKEGDIVERHLMDGDIVLYNRQPSLHRMSIMAHRVR 448 Query: 519 VVPHRTFRFNECVC 560 V+P+RTFR N CVC Sbjct: 449 VLPYRTFRHNLCVC 462 [227][TOP] >UniRef100_B3A009 DNA-directed RNA polymerase n=1 Tax=Haloarcula japonica RepID=B3A009_HALJP Length = 969 Score = 184 bits (467), Expect = 4e-45 Identities = 91/186 (48%), Positives = 127/186 (68%), Gaps = 1/186 (0%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D WE LQ FM+++ + PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R Sbjct: 332 DLWELLQYHVTTFMDNEISGTPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 391 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDP L +++VG+P RVA+ +T VT N + V GP+ +PGAN+V+ DG Sbjct: 392 TVISPDPTLSLNEVGVPDRVAKEMTQTMNVTDRNLEEARRYVSNGPEAHPGANYVKRPDG 451 Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542 + + N +++A+ + V RHLVDGD+++FNRQPSLHR+SIM+H V+P++TFR Sbjct: 452 RRLKVTEKNCEELAEKVEPEWEVSRHLVDGDIIIFNRQPSLHRMSIMAHEVVVMPYKTFR 511 Query: 543 FNECVC 560 N VC Sbjct: 512 LNTTVC 517 [228][TOP] >UniRef100_A8X1M6 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae RepID=A8X1M6_CAEBR Length = 1435 Score = 184 bits (466), Expect = 5e-45 Identities = 88/135 (65%), Positives = 108/135 (80%), Gaps = 1/135 (0%) Frame = +3 Query: 159 KRVDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA 338 KRVDFSGRTVISPDPNLR+DQVG+P+ VA TLT+PE V N ++ ++ G D +PGA Sbjct: 372 KRVDFSGRTVISPDPNLRIDQVGVPVHVAMTLTFPEIVNASNIDKMRKLIVNGSDVHPGA 431 Query: 339 NF-VETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSA 515 N+ V+ G+K+ L+YGNR+++AK+L LG VERHL D DVVLFNRQPSLH+ISIMSH A Sbjct: 432 NYLVDKKTGHKKLLKYGNREELAKNLRLGDTVERHLDDNDVVLFNRQPSLHKISIMSHRA 491 Query: 516 KVVPHRTFRFNECVC 560 KV+P RTFRFNEC C Sbjct: 492 KVMPGRTFRFNECAC 506 [229][TOP] >UniRef100_Q6FQS9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata RepID=Q6FQS9_CANGA Length = 1715 Score = 184 bits (466), Expect = 5e-45 Identities = 96/177 (54%), Positives = 122/177 (68%), Gaps = 1/177 (0%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A +M++D P L + +P++ I RLKGK GR RGNL GKRVDFS RTVIS Sbjct: 296 LQFHVATYMDNDIAGQPQALQKSGRPVKSIRARLKGKEGRIRGNLMGKRVDFSARTVISG 355 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNL +DQVG+P +ARTLTYPE VT +N RL+ V GP+ +PGA +V D+G++ L Sbjct: 356 DPNLELDQVGVPKSIARTLTYPEVVTPYNIDRLSQLVRNGPNEHPGAKYVIRDNGDRIDL 415 Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 RY R + L G VERH++D D VLFNRQPSLH++S+M+H KVVP+ TFR N Sbjct: 416 RYSKRSGDVQ-LQYGWKVERHIMDDDPVLFNRQPSLHKMSMMAHRVKVVPYSTFRLN 471 [230][TOP] >UniRef100_Q2PYR5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mortierella verticillata RepID=Q2PYR5_9FUNG Length = 1016 Score = 184 bits (466), Expect = 5e-45 Identities = 95/177 (53%), Positives = 120/177 (67%), Gaps = 1/177 (0%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A +M++D PP A +PL+ I RLKGK GR RGNL GKRVDFS RTVI+ Sbjct: 225 LQYHVATYMDNDIAGQPPAAHKNGRPLKSIRARLKGKEGRLRGNLMGKRVDFSARTVITG 284 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNL +D+VG+P +ARTLTYPE VT +N +L V GP +PGA +V DDG + L Sbjct: 285 DPNLSIDEVGVPRSIARTLTYPELVTPYNIDKLQKLVRNGPTEHPGAVYVIRDDGQRIDL 344 Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 R+ R+ L LG VERH+ DGDVV+FNRQPSLH++S+M H +V+P+ TFR N Sbjct: 345 RWNKRE---VPLQLGWKVERHINDGDVVIFNRQPSLHKMSMMGHKIRVMPYSTFRLN 398 [231][TOP] >UniRef100_Q2PYR4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhopalomyces elegans RepID=Q2PYR4_9FUNG Length = 792 Score = 184 bits (466), Expect = 5e-45 Identities = 94/179 (52%), Positives = 123/179 (68%), Gaps = 3/179 (1%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A +M++D P L + +PL+ I RLKGK GR RGNL GKRVDFS RTVI+ Sbjct: 227 LQFHVATYMDNDIAGQPQALQKSGRPLKSIRARLKGKEGRLRGNLMGKRVDFSARTVITG 286 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNL +D+VG+PL +A+ LT+PE VT +N +L V GP+ +PGA +V D+G + L Sbjct: 287 DPNLSIDEVGVPLLIAKNLTFPEIVTPYNVGKLQELVANGPNAHPGARYVYRDNGERIDL 346 Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 R+ R D+PL G VERHLVDGD+V+FNRQPSLH++S+M H +V+PH TFR N Sbjct: 347 RFNRR---GGDIPLQYGWRVERHLVDGDLVIFNRQPSLHKMSMMGHRVRVMPHHTFRLN 402 [232][TOP] >UniRef100_Q2PYR3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhizophlyctis rosea RepID=Q2PYR3_9FUNG Length = 1006 Score = 184 bits (466), Expect = 5e-45 Identities = 94/177 (53%), Positives = 121/177 (68%), Gaps = 1/177 (0%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A FM++D A + +PL+ I RLKGK GR RGNL GKRVDFS RTVI+ Sbjct: 222 LQYHVATFMDNDGAGANAAAHKSGRPLKTIRSRLKGKEGRLRGNLMGKRVDFSARTVITG 281 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNL +DQVG+P +AR LT+PE VTK N ++LAAAV GP +PGA +V +G++ L Sbjct: 282 DPNLSIDQVGVPRSIARNLTFPEVVTKCNFEKLAAAVANGPTAHPGAKYVINSNGDRTDL 341 Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 RY V L +G VERHL+D D+++FNRQPSLH++S+M H KV+P+ TFR N Sbjct: 342 RYAREDSVI--LKIGDKVERHLMDDDLIIFNRQPSLHKMSMMGHRVKVMPYSTFRLN 396 [233][TOP] >UniRef100_Q0PNI5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cantharellus cibarius RepID=Q0PNI5_CANCI Length = 417 Score = 184 bits (466), Expect = 5e-45 Identities = 94/177 (53%), Positives = 121/177 (68%), Gaps = 1/177 (0%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A +M++D +P + + +P++ I RLKGK GR RGNL GKRVDFS RTVI+ Sbjct: 227 LQFHVATYMDNDIAGIPQAMQKSGRPVKAIRSRLKGKEGRLRGNLMGKRVDFSSRTVITG 286 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPN+ +D+VG+P VA TLTYPERVT +N ++L V GP YPGA +V D G + L Sbjct: 287 DPNIMLDEVGVPKSVAMTLTYPERVTPYNIEQLQELVRNGPREYPGARYVVRDTGERIDL 346 Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 RY K+ L G +VERHL DGD VLFNRQPSLH++S+MSH K++P+ TFR N Sbjct: 347 RY--NKRTDAFLQYGWIVERHLRDGDYVLFNRQPSLHKMSMMSHRVKLMPYSTFRLN 401 [234][TOP] >UniRef100_B3T8B1 DNA-directed RNA polymerase n=1 Tax=uncultured marine crenarchaeote HF4000_APKG5C13 RepID=B3T8B1_9ARCH Length = 1268 Score = 184 bits (466), Expect = 5e-45 Identities = 93/182 (51%), Positives = 129/182 (70%), Gaps = 2/182 (1%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ + +++ + +P + +PL+ ++QRLKGK GRFRG+LSGKRVDFS RTVISP Sbjct: 272 LQYHCTTYFDNEVSGIPQAHHRSGRPLKTLTQRLKGKEGRFRGSLSGKRVDFSSRTVISP 331 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNL + +VG+P+ +A LT PE VT+ N ++L VI GP+T+PG N++ DG K L Sbjct: 332 DPNLDLGEVGVPMSIATKLTIPEIVTEWNIEKLKKLVINGPNTFPGVNYIVRPDGVKIRL 391 Query: 378 RY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFNEC 554 + + +VA L +G +VERHL DGDVVLFNRQPSLH++SIM+H +V+P +TFR + Sbjct: 392 DFVEDTLQVADQLEIGYLVERHLSDGDVVLFNRQPSLHQMSIMAHHVRVLPGKTFRLHPS 451 Query: 555 VC 560 VC Sbjct: 452 VC 453 [235][TOP] >UniRef100_A5DCV3 DNA-directed RNA polymerase II subunit RPB1 (Fragments) n=1 Tax=Pichia guilliermondii RepID=RPB1_PICGU Length = 1579 Score = 184 bits (466), Expect = 5e-45 Identities = 99/179 (55%), Positives = 122/179 (68%), Gaps = 3/179 (1%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A +M++D P L T +P++ I RLKGK GR RGNL GKRVDFS RTVIS Sbjct: 300 LQFHVATYMDNDIAGQPQALQKTGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVISG 359 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNL +DQVG+P+ +ARTLTYPE VT +N RL V GP+ +PGA +V D G++ L Sbjct: 360 DPNLDLDQVGVPISIARTLTYPEIVTPYNIHRLTEYVRNGPNEHPGAKYVIRDTGDRIDL 419 Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 RY R A D+ L G VERHL+D D VLFNRQPSLH++S+M H KV+P+ TFR N Sbjct: 420 RYNKR---AGDIALQYGWKVERHLMDDDPVLFNRQPSLHKMSMMCHRVKVMPYSTFRLN 475 [236][TOP] >UniRef100_UPI0000F24379 DNA-directed RNA polymerase II largest subunit (RNA polymerase II subunit 1) (B220) n=1 Tax=Pichia stipitis CBS 6054 RepID=UPI0000F24379 Length = 1739 Score = 183 bits (465), Expect = 7e-45 Identities = 98/179 (54%), Positives = 123/179 (68%), Gaps = 3/179 (1%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A +M++D P L T +P++ I RLKGK GR RGNL GKRVDFS RTVIS Sbjct: 296 LQFHVATYMDNDIAGQPQALQKTGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVISG 355 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNL +DQVG+P+ +ARTL+YPE VT +N RL V GP+ +PGA +V D G++ L Sbjct: 356 DPNLDLDQVGVPISIARTLSYPEVVTPYNIHRLTEYVRNGPNEHPGAKYVIRDTGDRIDL 415 Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 RY R A D+ L G VERHL+D D VLFNRQPSLH++S+M+H KV+P+ TFR N Sbjct: 416 RYNKR---AGDIALQYGWKVERHLMDNDPVLFNRQPSLHKMSMMAHRVKVMPYSTFRLN 471 [237][TOP] >UniRef100_Q2PYS2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dimargaris bacillispora RepID=Q2PYS2_9FUNG Length = 753 Score = 183 bits (465), Expect = 7e-45 Identities = 93/179 (51%), Positives = 125/179 (69%), Gaps = 3/179 (1%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 L+ A +MN+D + +P L + +PL+ I RLKGK GR RGNL GKRVDFS RTVI+ Sbjct: 230 LEYHIATYMNNDVSGIPQALQKSGRPLKSIRARLKGKEGRLRGNLMGKRVDFSARTVITG 289 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNL +D+VG+P +AR LTYPE VT +N +L AV GP +PGA ++ D+G++ L Sbjct: 290 DPNLSIDEVGVPRSIARNLTYPELVTPYNIHQLQQAVRNGPTQHPGAKYIVRDNGDRIDL 349 Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 RY K+ ++PL G VERHLV GD+V+FNRQPSLH++S+M H +V+P+ TFR N Sbjct: 350 RY---NKLGGEIPLQYGWRVERHLVSGDLVIFNRQPSLHKMSMMGHKVRVMPYSTFRLN 405 [238][TOP] >UniRef100_Q2PYR1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spiromyces aspiralis RepID=Q2PYR1_9FUNG Length = 1022 Score = 183 bits (465), Expect = 7e-45 Identities = 94/179 (52%), Positives = 122/179 (68%), Gaps = 3/179 (1%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ FMN++ + LP L + +P+R I RLKGK GR RGNL GKRVDFS RTVI+ Sbjct: 238 LQFHVVTFMNNEISGLPQALQKSGRPIRSIRARLKGKEGRLRGNLMGKRVDFSARTVITG 297 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPN+ +D+VG+P +AR LTYPE VT +N ++L V GP +PGA +V D G + L Sbjct: 298 DPNISIDEVGVPRSIARNLTYPEVVTPYNIEKLQELVRNGPTEHPGAKYVIRDTGERIDL 357 Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 RY R D+PL G VERH++DGDVV+FNRQPSLH++S+M H +V+P+ TFR N Sbjct: 358 RYNKR---GGDIPLAIGYRVERHIMDGDVVIFNRQPSLHKMSMMGHRVRVLPYSTFRLN 413 [239][TOP] >UniRef100_A3GID7 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis RepID=A3GID7_PICST Length = 1739 Score = 183 bits (465), Expect = 7e-45 Identities = 98/179 (54%), Positives = 123/179 (68%), Gaps = 3/179 (1%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A +M++D P L T +P++ I RLKGK GR RGNL GKRVDFS RTVIS Sbjct: 296 LQFHVATYMDNDIAGQPQALQKTGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVISG 355 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNL +DQVG+P+ +ARTL+YPE VT +N RL V GP+ +PGA +V D G++ L Sbjct: 356 DPNLDLDQVGVPISIARTLSYPEVVTPYNIHRLTEYVRNGPNEHPGAKYVIRDTGDRIDL 415 Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 RY R A D+ L G VERHL+D D VLFNRQPSLH++S+M+H KV+P+ TFR N Sbjct: 416 RYNKR---AGDIALQYGWKVERHLMDNDPVLFNRQPSLHKMSMMAHRVKVMPYSTFRLN 471 [240][TOP] >UniRef100_A1YIB4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Furculomyces boomerangus RepID=A1YIB4_9FUNG Length = 1024 Score = 183 bits (465), Expect = 7e-45 Identities = 94/179 (52%), Positives = 123/179 (68%), Gaps = 3/179 (1%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A FMN++ + LP L + +P++ I RLKGK GR RGNL GKRVDFS RTVI+ Sbjct: 235 LQFHVATFMNNEISGLPQALQKSGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVITG 294 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPN+ +DQVG+P +AR +TYPE VT +N ++L V GP+ +PGA +V D G + L Sbjct: 295 DPNIDIDQVGVPRSIARNMTYPEVVTPYNIEKLQEMVQNGPNEHPGAKYVIRDSGERIDL 354 Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 RY R D+PL G VERH++D DVV+FNRQPSLH++S+M H KV+P+ TFR N Sbjct: 355 RYSKR---GGDIPLRIGYRVERHMLDDDVVIFNRQPSLHKMSMMGHRVKVMPYSTFRLN 410 [241][TOP] >UniRef100_A8TEB8 DNA-directed RNA polymerase n=1 Tax=Methanococcus voltae A3 RepID=A8TEB8_METVO Length = 888 Score = 183 bits (465), Expect = 7e-45 Identities = 95/194 (48%), Positives = 130/194 (67%), Gaps = 9/194 (4%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 D W+ LQ + +++A +PP + +PLR ++QRLKGK GRFR NL+GKRV+FS R Sbjct: 267 DLWDLLQYHINTYFDNEAPGIPPARHRSGRPLRTLAQRLKGKEGRFRHNLAGKRVNFSAR 326 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISPDP L +++VGIP +A+ LT PE+VT HN + + G + +PG N+V Sbjct: 327 TVISPDPRLSINEVGIPELIAKELTVPEKVTAHNIDHIKELLKNGSEIHPGVNYVIKTIK 386 Query: 363 NKR------FLRYGNRKK--VAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518 NK +R ++ K A+++ G VERHL+DGDVVL+NRQPSLHR+SIM+H K Sbjct: 387 NKEGKQENFSIRVSDKNKDHWAENIEEGMSVERHLIDGDVVLYNRQPSLHRMSIMAHKVK 446 Query: 519 VVPHRTFRFNECVC 560 V+P+RTFR N CVC Sbjct: 447 VLPYRTFRHNLCVC 460 [242][TOP] >UniRef100_UPI00003BD271 hypothetical protein DEHA0A14036g n=1 Tax=Debaryomyces hansenii CBS767 RepID=UPI00003BD271 Length = 1749 Score = 183 bits (464), Expect = 9e-45 Identities = 98/179 (54%), Positives = 123/179 (68%), Gaps = 3/179 (1%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A +M++D P L T +P++ I RLKGK GR RGNL GKRVDFS RTVIS Sbjct: 301 LQFHVATYMDNDIAGQPQALQKTGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVISG 360 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNL +DQVG+P+ +ARTL+YPE VT +N RL V GP+ +PGA +V D G++ L Sbjct: 361 DPNLDLDQVGVPISIARTLSYPEIVTPYNIHRLTEYVRNGPNEHPGAKYVIRDTGDRIDL 420 Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 RY R A D+ L G VERHL+D D VLFNRQPSLH++S+M+H KV+P+ TFR N Sbjct: 421 RYNKR---AGDIALQYGWKVERHLMDDDPVLFNRQPSLHKMSMMAHRVKVMPYSTFRLN 476 [243][TOP] >UniRef100_Q2PYS6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Polychytrium aggregatum RepID=Q2PYS6_9FUNG Length = 1016 Score = 183 bits (464), Expect = 9e-45 Identities = 96/179 (53%), Positives = 122/179 (68%), Gaps = 3/179 (1%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A +MN+D + +P + +PL+ I RLKGK GR RGNL GKRVDFS RTVI+ Sbjct: 233 LQYHVATYMNNDISGIPKAQQKSGRPLKSIRARLKGKEGRLRGNLMGKRVDFSARTVITG 292 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNL +DQVG+P +AR LT+PE VT +N RL V GP +PGA +V D+G + L Sbjct: 293 DPNLSIDQVGVPRSIARNLTFPENVTPYNIARLQKYVQNGPMEHPGAKYVIRDNGERIDL 352 Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 RY KV +D+ L G VERHL+D DVV+FNRQPSLH++S+M H KV+P+ TFR N Sbjct: 353 RY---SKVGRDIHLQPGYKVERHLMDDDVVIFNRQPSLHKMSMMGHRVKVMPYSTFRLN 408 [244][TOP] >UniRef100_Q2PYQ1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Olpidium brassicae RepID=Q2PYQ1_9FUNG Length = 585 Score = 183 bits (464), Expect = 9e-45 Identities = 95/179 (53%), Positives = 122/179 (68%), Gaps = 3/179 (1%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A +MN++ P L + +PL+ I RLKGK GR RGNL GKRVDFS RTVI+ Sbjct: 61 LQFHVATYMNNELAGQPQALQKSGRPLKSIRARLKGKEGRLRGNLMGKRVDFSARTVITG 120 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNL +D+VG+P +AR LT+PE VT +N R+ V GP+ +PGA FV D G + L Sbjct: 121 DPNLSIDEVGVPRSIARNLTFPEIVTPYNIDRMQELVRNGPNEHPGAKFVIRDTGERIDL 180 Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 RY R + D+PL G VERHLVDGDV++FNRQPSLH++S+M H +V+P+ TFR N Sbjct: 181 RYHKR---SGDIPLQVGWKVERHLVDGDVIIFNRQPSLHKMSMMGHKVRVMPYSTFRLN 236 [245][TOP] >UniRef100_B5RSM9 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii RepID=B5RSM9_DEBHA Length = 1749 Score = 183 bits (464), Expect = 9e-45 Identities = 98/179 (54%), Positives = 123/179 (68%), Gaps = 3/179 (1%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A +M++D P L T +P++ I RLKGK GR RGNL GKRVDFS RTVIS Sbjct: 301 LQFHVATYMDNDIAGQPQALQKTGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVISG 360 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNL +DQVG+P+ +ARTL+YPE VT +N RL V GP+ +PGA +V D G++ L Sbjct: 361 DPNLDLDQVGVPISIARTLSYPEIVTPYNIHRLTEYVRNGPNEHPGAKYVIRDTGDRIDL 420 Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 RY R A D+ L G VERHL+D D VLFNRQPSLH++S+M+H KV+P+ TFR N Sbjct: 421 RYNKR---AGDIALQYGWKVERHLMDDDPVLFNRQPSLHKMSMMAHRVKVMPYSTFRLN 476 [246][TOP] >UniRef100_A1YIB0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hydnum repandum RepID=A1YIB0_9HOMO Length = 1010 Score = 183 bits (464), Expect = 9e-45 Identities = 93/177 (52%), Positives = 121/177 (68%), Gaps = 1/177 (0%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A +M++D + +P + + +P++ I RLKGK GR RGNL GKRVDFS RTVI+ Sbjct: 226 LQFHVATYMDNDISGIPQAMQKSGRPVKAIRSRLKGKEGRLRGNLMGKRVDFSSRTVITG 285 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPN+ +D+VG+P +A TLTYPERVT +N +L V GP YPGA +V D G + L Sbjct: 286 DPNIMLDEVGVPKSIAMTLTYPERVTPYNIAQLQELVRNGPREYPGARYVVRDTGERIDL 345 Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 RY K+ L G +VERHL DGD VLFNRQPSLH++S+MSH K++P+ TFR N Sbjct: 346 RY--NKRADAFLQYGWIVERHLRDGDYVLFNRQPSLHKMSMMSHRVKLMPYSTFRLN 400 [247][TOP] >UniRef100_B3T303 DNA-directed RNA polymerase n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW93I24 RepID=B3T303_9ARCH Length = 1264 Score = 183 bits (464), Expect = 9e-45 Identities = 93/182 (51%), Positives = 128/182 (70%), Gaps = 2/182 (1%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ + +++ + +P + +PL+ ++QRLKGK GRFRG+LSGKRVDFS RTVISP Sbjct: 272 LQYHCTTYFDNEVSGIPQAHHRSGRPLKTLTQRLKGKEGRFRGSLSGKRVDFSSRTVISP 331 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNL + +VG+P +A LT PE VT+ N ++L VI GP+T+PG N++ DG K L Sbjct: 332 DPNLDLGEVGVPTSIASKLTIPEIVTEWNIEKLKKLVINGPNTFPGVNYIVRPDGVKIRL 391 Query: 378 RY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFNEC 554 + + +VA L +G +VERHL DGDVVLFNRQPSLH++SIM+H +V+P +TFR + Sbjct: 392 DFVEDTLQVANQLEIGYLVERHLSDGDVVLFNRQPSLHQMSIMAHHVRVLPGKTFRLHPS 451 Query: 555 VC 560 VC Sbjct: 452 VC 453 [248][TOP] >UniRef100_Q5I2R7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hygrophoropsis aurantiaca RepID=Q5I2R7_9HOMO Length = 991 Score = 182 bits (463), Expect = 1e-44 Identities = 94/177 (53%), Positives = 119/177 (67%), Gaps = 1/177 (0%) Frame = +3 Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197 LQ A +M++D +P L + +P++ I RLKGK GR RGNL GKRVDFS RTVI+ Sbjct: 214 LQFHVATYMDNDIAGIPQALQKSGRPVKAIRARLKGKEGRLRGNLMGKRVDFSARTVITG 273 Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377 DPNL++D+VG+P +A LTYPERVT +N L V GP YPGA +V D G + L Sbjct: 274 DPNLQLDEVGVPRSIAMNLTYPERVTPYNIAYLQELVRNGPTAYPGARYVVRDTGERIDL 333 Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548 RY K+ L G +VERHL DGD VLFNRQPSLH++S+MSH K++P+ TFR N Sbjct: 334 RY--NKRADAFLQYGWIVERHLKDGDFVLFNRQPSLHKMSMMSHRVKLMPYSTFRLN 388 [249][TOP] >UniRef100_A9CTM9 DNA-directed RNA polymerase n=1 Tax=Enterocytozoon bieneusi H348 RepID=A9CTM9_ENTBH Length = 1174 Score = 182 bits (463), Expect = 1e-44 Identities = 95/193 (49%), Positives = 133/193 (68%), Gaps = 8/193 (4%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKP-LRGISQRLKGKTGRFRGNLSGKRVDFSGR 182 + W++LQ++ A ++NSD LP + T ++ I RLKGK GRFR NLSGKRVDFSGR Sbjct: 257 EDWDYLQLQIALYINSD---LPSIHITNNDNIKSIIHRLKGKQGRFRMNLSGKRVDFSGR 313 Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362 TVISP+PNL ++Q+G+P +A +T PE+VT N++ L V GP+ GAN++ ++ Sbjct: 314 TVISPNPNLSIEQIGVPKEIALEMTIPEKVTVFNKEELQILVNNGPNCIDGANYIIRNEV 373 Query: 363 N-------KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521 K FL++ KV ++L +G +VERH+ DGD+VLFNRQPSLHR+SIM+H K+ Sbjct: 374 RNNETRTFKIFLKFAKNPKV-RELKVGDIVERHIKDGDIVLFNRQPSLHRMSIMAHRVKL 432 Query: 522 VPHRTFRFNECVC 560 +RTF+FNE VC Sbjct: 433 HDNRTFQFNESVC 445 [250][TOP] >UniRef100_O26399 DNA-directed RNA polymerase n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26399_METTH Length = 664 Score = 182 bits (463), Expect = 1e-44 Identities = 94/195 (48%), Positives = 129/195 (66%), Gaps = 10/195 (5%) Frame = +3 Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTG---------RFRGNLS 155 D WE LQ + +++A+ + P + + L + QRLK K G RFRGNLS Sbjct: 46 DLWELLQYHVTTYFDNEASGVTPARQRSGRQLLTLMQRLKSKKGMFSSELSKGRFRGNLS 105 Query: 156 GKRVDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPG 335 GKRV+FS RTVISPDPN+ +++VG+P +AR +T P VT+ N R+ + GPD +PG Sbjct: 106 GKRVNFSARTVISPDPNISINEVGVPEIIAREVTVPVYVTEWNIDRMREYIENGPDVHPG 165 Query: 336 ANFVETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSA 515 AN+V DG + + N + V ++L G VVERHL DGD+VLFNRQPSLHR+S+M+H A Sbjct: 166 ANYVIRPDGRRIRISSKNTETVIENLKPGYVVERHLKDGDIVLFNRQPSLHRMSLMAHRA 225 Query: 516 KVVPHRTFRFNECVC 560 +V+P++TFR N CVC Sbjct: 226 RVLPYKTFRLNLCVC 240