AU192225 ( PFL027f08_r )

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[1][TOP]
>UniRef100_B1XPV3 Ribonuclease II n=1 Tax=Synechococcus sp. PCC 7002
           RepID=B1XPV3_SYNP2
          Length = 670

 Score =  110 bits (274), Expect = 7e-23
 Identities = 64/166 (38%), Positives = 94/166 (56%), Gaps = 3/166 (1%)
 Frame = +2

Query: 29  YPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEA- 205
           YP  FS ++ + ++  LSA P  ++ G    R DL HL +Y +D  ST E+DD +S E  
Sbjct: 236 YPRKFSQKVLDVSHARLSASPGDTDEGN---RLDLTHLKTYTIDDESTSEIDDGLSIETL 292

Query: 206 --DTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASN 379
                ++W+HIAD +  L PG+ L  EA RRS +LYLPT  I+M P ELA   +SL    
Sbjct: 293 EDGLHKVWIHIADPTRLLSPGDELDLEARRRSTSLYLPTGMISMFPEELATGPMSL---- 348

Query: 380 GHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                  +     ALSFG  + E+G++ D ++ PS ++  +RLTY+
Sbjct: 349 ------RQGQVCAALSFGVLLTENGAIADYEITPSWVKPTYRLTYD 388

[2][TOP]
>UniRef100_B8HWY4 Exoribonuclease II n=1 Tax=Cyanothece sp. PCC 7425
           RepID=B8HWY4_CYAP4
          Length = 671

 Score =  108 bits (269), Expect = 3e-22
 Identities = 72/175 (41%), Positives = 97/175 (55%), Gaps = 3/175 (1%)
 Frame = +2

Query: 2   SLELRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEV 181
           +L LR S   P  F+  + EAA+  L++ P+  +   +A R +L  L  Y +D  ST E+
Sbjct: 230 NLFLRRSQI-PLQFAARVLEAAHHCLTSPPVDVD---AAHRVNLTGLKVYTIDDESTREI 285

Query: 182 DDAMSWE---ADTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELAR 352
           DD +S E       RLW+HIAD S WL PG+ L  EA RRS T+YLPT  I M P ELA 
Sbjct: 286 DDGLSLEFLPEGQQRLWIHIADPSRWLTPGDELDLEARRRSTTIYLPTGMIPMFPPELAT 345

Query: 353 DGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
             +SL           +     ALSFG T+ + G++ D Q+ PS I+  +RLTYE
Sbjct: 346 GPMSL----------TQGQVCCALSFGITLDKTGAVVDYQLAPSQIKPTYRLTYE 390

[3][TOP]
>UniRef100_B7K7A9 Exoribonuclease II n=1 Tax=Cyanothece sp. PCC 7424
           RepID=B7K7A9_CYAP7
          Length = 676

 Score =  107 bits (267), Expect = 5e-22
 Identities = 72/175 (41%), Positives = 93/175 (53%), Gaps = 3/175 (1%)
 Frame = +2

Query: 2   SLELRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEV 181
           +L LR S  YP  FS  + E A   L + P      P   R DL HL  Y +D  ST E+
Sbjct: 233 NLFLRRSS-YPVQFSKRVLEVAKHCLESPP----PDPDVVRLDLTHLKIYTIDDESTKEI 287

Query: 182 DDAMSWEA---DTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELAR 352
           DD +S E     T RLW+HIAD S  + PG+ L  EA +RS +LYLPT  I+M P ELA 
Sbjct: 288 DDGLSVEQLENGTTRLWIHIADPSRLVSPGDELDLEARKRSTSLYLPTGMISMFPPELAT 347

Query: 353 DGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
             +SL           +     ALSFG  + EDGS+ D  +  SL++  +RLTY+
Sbjct: 348 GPMSL----------VQGQICPALSFGVILKEDGSVEDYIIHASLVKPTYRLTYD 392

[4][TOP]
>UniRef100_B4W5F1 RNB-like protein n=1 Tax=Microcoleus chthonoplastes PCC 7420
           RepID=B4W5F1_9CYAN
          Length = 671

 Score =  107 bits (267), Expect = 5e-22
 Identities = 74/175 (42%), Positives = 94/175 (53%), Gaps = 3/175 (1%)
 Frame = +2

Query: 2   SLELRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEV 181
           +L LR S  YP  F  E+ +     L + P      P   R DL HL  Y VD  ST E+
Sbjct: 228 NLFLRRSS-YPVHFRREVLDLVQHYLDSPP----PDPDQDRLDLTHLKVYTVDDESTSEI 282

Query: 182 DDAMSWEA-DTG--RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELAR 352
           DD +S E  D G  RLW+HIAD +  ++P + L  EA RRS TLYLPT  I+M P ELA 
Sbjct: 283 DDGLSLEQLDDGKERLWIHIADPTRLVRPDDELDREARRRSTTLYLPTGMISMFPAELAT 342

Query: 353 DGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
             +SL           E      LSFG  + EDGS+ + ++ PSLI+  +RLTYE
Sbjct: 343 GPMSL----------VEGQVCPTLSFGVILDEDGSVQEYKIHPSLIKPTYRLTYE 387

[5][TOP]
>UniRef100_Q31P65 Exoribonuclease II n=2 Tax=Synechococcus elongatus
           RepID=Q31P65_SYNE7
          Length = 670

 Score =  105 bits (261), Expect = 2e-21
 Identities = 69/175 (39%), Positives = 94/175 (53%), Gaps = 3/175 (1%)
 Frame = +2

Query: 2   SLELRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEV 181
           +L LR S   P TF   + +     L A P+  +      R DL HL  Y +D  ST E+
Sbjct: 230 NLFLRRSQV-PTTFPVAVMDVVQTCLDAPPVDRDR-----RQDLSHLKVYTIDDESTREI 283

Query: 182 DDAMSWEA-DTGRL--WVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELAR 352
           DD +S +    GRL  WVH+AD +  ++PG+ L  EA RRS T+YLPT  + M PLELA 
Sbjct: 284 DDGLSCQRLSDGRLQLWVHVADPTRLIEPGDALDLEARRRSTTIYLPTGMVPMFPLELAA 343

Query: 353 DGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
             +SL           +  A  ALSFG  + E G++   +++PS IR  +RLTYE
Sbjct: 344 GPMSL----------VQGQACCALSFGICLDEQGAIASYEIVPSQIRPTYRLTYE 388

[6][TOP]
>UniRef100_Q2JIR4 Exoribonuclease, VacB/RNB family n=1 Tax=Synechococcus sp.
           JA-2-3B'a(2-13) RepID=Q2JIR4_SYNJB
          Length = 686

 Score =  102 bits (255), Expect = 1e-20
 Identities = 63/165 (38%), Positives = 86/165 (52%), Gaps = 3/165 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMS---WE 202
           P  F   ++     LLS  P          R DL HL +Y +D AST ++DDA+S   W 
Sbjct: 256 PTQFPKAVERYTQALLSQPP---SFWDPHLRQDLTHLHTYTIDDASTRDIDDALSVEFWS 312

Query: 203 ADTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
            D  +LW+HIAD S W++ G+PL  EA +R  ++YLP   I M P EL+   +SL     
Sbjct: 313 DDAVKLWIHIADPSCWVQWGDPLDLEARKRGTSVYLPERVIPMFPPELSTGPMSL----- 367

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
              V  E     ALSFG  +  DG + D ++  S I+  +RLTYE
Sbjct: 368 ---VQGEVRP--ALSFGILLGSDGQIRDSEICLSQIKVTYRLTYE 407

[7][TOP]
>UniRef100_B0JUR2 Ribonuclease II n=1 Tax=Microcystis aeruginosa NIES-843
           RepID=B0JUR2_MICAN
          Length = 671

 Score =  102 bits (253), Expect = 2e-20
 Identities = 72/175 (41%), Positives = 95/175 (54%), Gaps = 3/175 (1%)
 Frame = +2

Query: 2   SLELRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEV 181
           +L LR S  YP  FS ++ + A   L   P  ++V     R DL H   Y +D  ST E+
Sbjct: 228 NLFLRRSS-YPVQFSKKVLDVARLNLLNPPADADVNN---RLDLTHQKIYTIDDESTEEI 283

Query: 182 DDAMSWE--ADTG-RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELAR 352
           DD +S E  AD G RLW+HIAD S  + P + L  EA RRS +LYLPT  + M PLELA 
Sbjct: 284 DDGLSVEMLADGGHRLWIHIADPSRLVLPDDELDLEARRRSTSLYLPTGMVPMFPLELAA 343

Query: 353 DGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
             +SL           +     ALSFG  + E G++ D ++ PS I+  +RLTYE
Sbjct: 344 GPMSL----------VQGKLCPALSFGVILDETGAIADYRIHPSTIKPTYRLTYE 388

[8][TOP]
>UniRef100_A8YM56 Similar to Q4BZP1_CROWT Exoribonuclease II n=1 Tax=Microcystis
           aeruginosa PCC 7806 RepID=A8YM56_MICAE
          Length = 671

 Score =  102 bits (253), Expect = 2e-20
 Identities = 72/175 (41%), Positives = 95/175 (54%), Gaps = 3/175 (1%)
 Frame = +2

Query: 2   SLELRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEV 181
           +L LR S  YP  FS ++ + A   L   P  ++V     R DL H   Y +D  ST E+
Sbjct: 228 NLFLRRSS-YPVQFSKKVLDVARLNLLNPPADADVNN---RLDLTHQKIYTIDDESTEEI 283

Query: 182 DDAMSWE--ADTG-RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELAR 352
           DD +S E  AD G RLW+HIAD S  + P + L  EA RRS +LYLPT  + M PLELA 
Sbjct: 284 DDGLSVEILADGGHRLWIHIADPSRLVLPDDELDLEARRRSTSLYLPTGMVPMFPLELAA 343

Query: 353 DGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
             +SL           +     ALSFG  + E G++ D ++ PS I+  +RLTYE
Sbjct: 344 GPMSL----------VQGKLCPALSFGVILDETGAIADYRIHPSTIKPTYRLTYE 388

[9][TOP]
>UniRef100_Q2JV50 Exoribonuclease, VacB/RNB family n=1 Tax=Synechococcus sp. JA-3-3Ab
           RepID=Q2JV50_SYNJA
          Length = 683

 Score =  100 bits (250), Expect = 4e-20
 Identities = 63/165 (38%), Positives = 91/165 (55%), Gaps = 3/165 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADT 211
           P  F  E++  A  LL   P   ++     R DL HL +Y +D AST ++DDA+S E ++
Sbjct: 256 PTQFPKEVERYAQTLLGGPPPFLDL---PLRRDLTHLHTYTIDDASTRDIDDALSVEFES 312

Query: 212 G---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
               +LW+HIAD S W++ G+PL  EA +R  ++YLP   I M P EL+   +SL     
Sbjct: 313 DDEVKLWIHIADPSCWVQWGDPLDLEARKRGTSVYLPERVIPMFPSELSTGPMSL----- 367

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
              V  E     ALSFG  +  DG++ D ++  S IR  +RLTY+
Sbjct: 368 ---VQGEVRP--ALSFGIRLGSDGAVRDYEICLSQIRVNYRLTYD 407

[10][TOP]
>UniRef100_P73177 Uncharacterized ribonuclease sll1290 n=1 Tax=Synechocystis sp. PCC
           6803 RepID=RN2H_SYNY3
          Length = 666

 Score =  100 bits (249), Expect = 6e-20
 Identities = 65/166 (39%), Positives = 91/166 (54%), Gaps = 3/166 (1%)
 Frame = +2

Query: 29  YPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWE-- 202
           YP  F  ++ + A+  L+  P      P   R DL  L +Y +D  ST E+DD +S E  
Sbjct: 236 YPNQFPAKVSDVAHAYLTNPP----PDPDQERFDLTTLKTYTIDDESTSEIDDGLSVETL 291

Query: 203 ADTG-RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASN 379
           AD G RLW+H+AD +  L P + L  EA +RS +LYLPT  I+M P ELA   +SL    
Sbjct: 292 ADGGHRLWIHVADPTRLLSPNDELDLEARKRSTSLYLPTGMISMFPPELATGPMSL---- 347

Query: 380 GHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                  +    +ALSFG T+ E G++ D  + PS ++  +RLTYE
Sbjct: 348 ------LQGQRCVALSFGVTLDEVGAVRDFTIAPSWVKPTYRLTYE 387

[11][TOP]
>UniRef100_B4WFI8 RNB-like protein n=1 Tax=Synechococcus sp. PCC 7335
           RepID=B4WFI8_9SYNE
          Length = 681

 Score = 99.8 bits (247), Expect = 1e-19
 Identities = 63/164 (38%), Positives = 84/164 (51%), Gaps = 3/164 (1%)
 Frame = +2

Query: 35  PTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEA--- 205
           PT  PE   A+   +   P A E      R DL HL  Y +D  ST E+DD +S E    
Sbjct: 239 PTQFPEEVSASVAQIIESPPAEE----GDRVDLTHLKVYTIDDESTQEIDDGLSCETLAD 294

Query: 206 DTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGH 385
              +LW+HIAD + W+     L TEA RR  T+YLPT  I M P ELA   +SL      
Sbjct: 295 GRQKLWIHIADPTYWISLNGILDTEARRRCTTVYLPTGVIPMFPFELAAGPMSL------ 348

Query: 386 AHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                +     ALSF   +AEDGS+ +  + PS+++  +RLTY+
Sbjct: 349 ----VQGQICNALSFSVLLAEDGSVAEYSIQPSVVKPTYRLTYD 388

[12][TOP]
>UniRef100_Q8YNW1 Ribonuclease II n=1 Tax=Nostoc sp. PCC 7120 RepID=Q8YNW1_ANASP
          Length = 686

 Score = 99.4 bits (246), Expect = 1e-19
 Identities = 69/175 (39%), Positives = 88/175 (50%), Gaps = 3/175 (1%)
 Frame = +2

Query: 2   SLELRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEV 181
           +L LR S   P  F  ++ E A   L   P   +      R DL HL  Y VD  ST E+
Sbjct: 244 NLFLRRSSI-PVQFPSKVLEVAQQRLDFPPTDLDTN----RLDLTHLKVYTVDDESTTEI 298

Query: 182 DDAMSWEA---DTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELAR 352
           DD +SWE    D  RLWVHIAD + +L P + L  EA +R  T+YLPT  I M P  LA 
Sbjct: 299 DDGLSWEKLPDDRERLWVHIADPTRYLAPEDDLDLEARKRGSTVYLPTGMIPMFPEVLAT 358

Query: 353 DGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
             +SL           +     ALSFG  +   G++ D  + PSLI+  +RLTYE
Sbjct: 359 GPMSL----------VQGRVCCALSFGVVLDGTGAVQDFTIHPSLIKPTYRLTYE 403

[13][TOP]
>UniRef100_Q3MDJ0 Ribonuclease II n=1 Tax=Anabaena variabilis ATCC 29413
           RepID=Q3MDJ0_ANAVT
          Length = 686

 Score = 99.4 bits (246), Expect = 1e-19
 Identities = 69/175 (39%), Positives = 88/175 (50%), Gaps = 3/175 (1%)
 Frame = +2

Query: 2   SLELRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEV 181
           +L LR S   P  F  ++ E A   L   P   +      R DL HL  Y VD  ST E+
Sbjct: 244 NLFLRRSSI-PVQFPSKVLEVAQQRLDFPPTDLDTN----RLDLTHLKVYTVDDESTTEI 298

Query: 182 DDAMSWEA---DTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELAR 352
           DD +SWE       RLWVHIAD + +L P + L  EA +R  T+YLPT  I M P  LA 
Sbjct: 299 DDGLSWEKLPDSRERLWVHIADPTRYLAPEDDLDLEARKRGSTVYLPTGMIPMFPEILAT 358

Query: 353 DGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
             +SL           +     ALSFG  + E G++ D  + PSLI+  +RLTYE
Sbjct: 359 GPMSL----------VQGRVCCALSFGVVLDETGAVEDFTIHPSLIKPTYRLTYE 403

[14][TOP]
>UniRef100_A0ZC94 Ribonuclease II n=1 Tax=Nodularia spumigena CCY9414
           RepID=A0ZC94_NODSP
          Length = 686

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 63/165 (38%), Positives = 81/165 (49%), Gaps = 3/165 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEA-- 205
           P  F  ++ E A   L   P   +      R DL HL  Y +D  ST E+DD +SWE   
Sbjct: 253 PVQFPSKVLEVAQQRLDFPPTDLDTN----RLDLSHLKVYTIDDESTTEIDDGLSWEILP 308

Query: 206 -DTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
               RLWVHIAD + WL P + L  EA +R  T+YLPT  + M P  LA   +SL     
Sbjct: 309 DGRERLWVHIADPTRWLVPEDELDLEARKRGSTVYLPTGMVPMFPELLATGPMSL----- 363

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                 +     ALSFG  + E G + D  + PS I+  +RLTYE
Sbjct: 364 -----VQGRISCALSFGVVLDESGGVEDYTIHPSFIKPTYRLTYE 403

[15][TOP]
>UniRef100_Q7NK64 Ribonuclease II n=1 Tax=Gloeobacter violaceus RepID=Q7NK64_GLOVI
          Length = 663

 Score = 98.6 bits (244), Expect = 2e-19
 Identities = 66/175 (37%), Positives = 92/175 (52%), Gaps = 3/175 (1%)
 Frame = +2

Query: 2   SLELRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEV 181
           ++ LR S   P  F   + E A  LL   P        A R D   L  Y +D  ST E+
Sbjct: 230 NIHLRRSGI-PVHFGTPVSEYARKLLENPP-----ADPASRRDFGRLAIYTIDDESTREI 283

Query: 182 DDAMSWEA-DTGR--LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELAR 352
           DD +S E  + GR  LW+HIAD + W++PG+PL  EA RR+ ++YLPT  I M P ELA 
Sbjct: 284 DDGLSLEMLEDGREKLWIHIADPTRWVQPGDPLEAEARRRATSVYLPTGAIPMFPPELAT 343

Query: 353 DGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
             +SL     +           ALSFG  +  DG++ + +V P+L+R  + +TYE
Sbjct: 344 GPMSLLPGQLNC----------ALSFGAIIGPDGAVENFEVTPALVRTVYPVTYE 388

[16][TOP]
>UniRef100_Q10Y88 Exoribonuclease II n=1 Tax=Trichodesmium erythraeum IMS101
           RepID=Q10Y88_TRIEI
          Length = 674

 Score = 98.6 bits (244), Expect = 2e-19
 Identities = 70/175 (40%), Positives = 92/175 (52%), Gaps = 3/175 (1%)
 Frame = +2

Query: 2   SLELRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEV 181
           +L LR S   P  FS ++ E A   L + P      P   R DL HL  Y +D  ST E+
Sbjct: 230 NLYLRRSQI-PKCFSTKVLEVAKSCLQSLP----PDPETNRLDLTHLKVYTIDDESTQEI 284

Query: 182 DDAMSWE-ADTG--RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELAR 352
           DD +S E  + G  R+WVHIAD +  L PG+ L  EA RR+ TLYLPT  + M P ELA 
Sbjct: 285 DDGLSIEFLEDGQHRIWVHIADPTRLLIPGDELDLEARRRTTTLYLPTGMVPMFPPELAT 344

Query: 353 DGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
             +SL           +     ALSFG  + E G++ D  +  SLI+  +RLTY+
Sbjct: 345 GPMSL----------IQGQVCRALSFGILLDESGAVIDYIIHASLIKPTYRLTYD 389

[17][TOP]
>UniRef100_B1WYB0 Ribonuclease II n=1 Tax=Cyanothece sp. ATCC 51142
           RepID=B1WYB0_CYAA5
          Length = 670

 Score = 97.4 bits (241), Expect = 5e-19
 Identities = 62/165 (37%), Positives = 88/165 (53%), Gaps = 3/165 (1%)
 Frame = +2

Query: 29  YPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEA- 205
           YP  F  ++ + A+  L   P  ++    + R DL HL  Y +D  ST E+DD +S E  
Sbjct: 236 YPLNFPQKVLDVASSYLQTLPPDAD----SDRLDLTHLKVYTIDDESTEEIDDGLSVEYL 291

Query: 206 --DTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASN 379
             D  +LW+HIAD +  + PG+ L  EA +RS TLYLPT  I+M P+ELA   +SL    
Sbjct: 292 DDDRVKLWIHIADPTRLVTPGDELDLEARKRSTTLYLPTGMISMFPVELATGPMSL---- 347

Query: 380 GHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
                  +     ALSFG  +   G++ D  +  SLI+  +RLTY
Sbjct: 348 ------RQGKLCAALSFGVILDSHGAILDYSIHASLIKPTYRLTY 386

[18][TOP]
>UniRef100_A4S361 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
           RepID=A4S361_OSTLU
          Length = 645

 Score = 97.4 bits (241), Expect = 5e-19
 Identities = 61/157 (38%), Positives = 91/157 (57%), Gaps = 4/157 (2%)
 Frame = +2

Query: 59  EAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEA--DTG--RLWV 226
           +A   +LS  P+ ++   +A R DL +L +YA+D A T EVDDA+S EA  D G  R+WV
Sbjct: 216 KACAEVLSNEPVDAD---AASRVDLTYLRAYAIDDAETVEVDDAVSAEALGDDGQIRVWV 272

Query: 227 HIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEE 406
           HIAD + W+  G PL   A +R+ TLY PTE + M PLE+A   +SL         S  +
Sbjct: 273 HIADPTRWIPLGSPLDAIARQRATTLYYPTEIVPMFPLEIAAGPMSLG--------SRSD 324

Query: 407 NAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
            A  A++    +  +G++ D ++MPS ++   R TY+
Sbjct: 325 VASEAMTVRADIDREGNIMDFEIMPSFVKLDRRWTYD 361

[19][TOP]
>UniRef100_Q8DL46 Ribonuclease II n=1 Tax=Thermosynechococcus elongatus BP-1
           RepID=Q8DL46_THEEB
          Length = 674

 Score = 96.7 bits (239), Expect = 8e-19
 Identities = 60/161 (37%), Positives = 87/161 (54%), Gaps = 2/161 (1%)
 Frame = +2

Query: 41  FSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEA--DTG 214
           FS ++   A+  L++ P   +   +  R DL HL  Y +D  ST E+DD +S E   D  
Sbjct: 242 FSAKVLAVAHERLTSPPTDID---APLRRDLTHLKVYTIDDESTQEIDDGLSLEVIGDRQ 298

Query: 215 RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHV 394
           +LW+HIAD + W+   + L  EA RR+ T+YLPT  I M P ELA   +SL A       
Sbjct: 299 KLWIHIADPTRWVMVDDLLDQEARRRATTVYLPTGMIPMFPTELATGPMSLVAG------ 352

Query: 395 SEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                   ALSFG  +A+ G + + ++ PS IR  +RL+Y+
Sbjct: 353 ----QTCCALSFGILLADSGEVLEYEICPSWIRPTYRLSYD 389

[20][TOP]
>UniRef100_B2J0D2 Ribonuclease II n=1 Tax=Nostoc punctiforme PCC 73102
           RepID=B2J0D2_NOSP7
          Length = 686

 Score = 96.7 bits (239), Expect = 8e-19
 Identities = 66/175 (37%), Positives = 86/175 (49%), Gaps = 3/175 (1%)
 Frame = +2

Query: 2   SLELRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEV 181
           +L LR S   P  F  ++ E A   L   P+ S+      R DL HL  Y +D  +T E+
Sbjct: 244 NLFLRRSSI-PIQFPNKVLEVAQQRLDFPPIDSDTN----RLDLTHLKVYTIDDETTTEI 298

Query: 182 DDAMSWEA---DTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELAR 352
           DD +SWE       RLWVHIAD + WL P + L  EA +R  T+YLPT  I M P  LA 
Sbjct: 299 DDGLSWEILPDGRERLWVHIADPTRWLVPEDELDLEARKRGSTVYLPTGMIPMFPEVLAT 358

Query: 353 DGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
             +SL           +     ALSFG  +   G + D  +  S I+  +RLTYE
Sbjct: 359 GPMSL----------IQGRVCCALSFGIILGTTGGVEDYSIHTSSIKPTYRLTYE 403

[21][TOP]
>UniRef100_B7JW30 Exoribonuclease II n=1 Tax=Cyanothece sp. PCC 8801
           RepID=B7JW30_CYAP8
          Length = 671

 Score = 95.9 bits (237), Expect = 1e-18
 Identities = 65/174 (37%), Positives = 92/174 (52%), Gaps = 3/174 (1%)
 Frame = +2

Query: 2   SLELRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEV 181
           +L LR S  YP  F  ++ + A   L+  P   +      R DL HL  Y +D  ST E+
Sbjct: 228 NLFLRRSS-YPMQFPKKVLDVAQSFLTLPPPDQDED----RLDLTHLKVYTIDDESTEEI 282

Query: 182 DDAMSWEA---DTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELAR 352
           DD +S E    D  +LW+HIAD +  + PG+ L  EA RR+ TLYLPT  I+M P+ELA 
Sbjct: 283 DDGLSVEFLSDDQVKLWIHIADPTRLVSPGDELDLEARRRTTTLYLPTGMISMFPVELAT 342

Query: 353 DGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
             +SL           +     +LSF  T+  +G++ D  +  SLI+  +RLTY
Sbjct: 343 GPMSL----------IQGKICPSLSFAVTLDNEGAVLDYSIHASLIKPTYRLTY 386

[22][TOP]
>UniRef100_C7QT24 Exoribonuclease II n=1 Tax=Cyanothece sp. PCC 8802
           RepID=C7QT24_CYAP0
          Length = 671

 Score = 95.9 bits (237), Expect = 1e-18
 Identities = 65/174 (37%), Positives = 92/174 (52%), Gaps = 3/174 (1%)
 Frame = +2

Query: 2   SLELRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEV 181
           +L LR S  YP  F  ++ + A   L+  P   +      R DL HL  Y +D  ST E+
Sbjct: 228 NLFLRRSS-YPMQFPKKVLDVAQSFLTLPPPDQDED----RLDLTHLKVYTIDDESTEEI 282

Query: 182 DDAMSWEA---DTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELAR 352
           DD +S E    D  +LW+HIAD +  + PG+ L  EA RR+ TLYLPT  I+M P+ELA 
Sbjct: 283 DDGLSVEFLSDDQVKLWIHIADPTRLVSPGDELDLEARRRTTTLYLPTGMISMFPVELAT 342

Query: 353 DGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
             +SL           +     +LSF  T+ + G++ D  +  SLI+  +RLTY
Sbjct: 343 GPMSL----------IQGKICPSLSFAVTLDDQGAVLDYSIHASLIKPTYRLTY 386

[23][TOP]
>UniRef100_A3IXH4 Ribonuclease II n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IXH4_9CHRO
          Length = 670

 Score = 95.9 bits (237), Expect = 1e-18
 Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 3/165 (1%)
 Frame = +2

Query: 29  YPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEA- 205
           YP  F  ++ + ++  L   P  ++    + R DL HL  Y +D  ST E+DD +S E  
Sbjct: 236 YPLNFPQKVLDVSSSYLQTLPPDAD----SDRLDLTHLKVYTIDDESTKEIDDGLSVEYL 291

Query: 206 --DTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASN 379
             +  +LW+HIAD +  + PG+ L  EA +RS TLYLPT  I+M P+ELA   +SL    
Sbjct: 292 DDERVKLWIHIADPTRLVTPGDELDLEARKRSTTLYLPTGMISMFPVELATGPMSL---- 347

Query: 380 GHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
                  +     ALSFG  +  +G++ D  +  S+I+  +RLTY
Sbjct: 348 ------RQGELCAALSFGVVLDSEGAVADFSIHASVIKPTYRLTY 386

[24][TOP]
>UniRef100_A0YR63 Ribonuclease II n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YR63_9CYAN
          Length = 672

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 69/175 (39%), Positives = 89/175 (50%), Gaps = 3/175 (1%)
 Frame = +2

Query: 2   SLELRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEV 181
           +L LR +   P  F  ++ E A  LL + P      P   R DL  L  Y +D  ST E+
Sbjct: 230 NLSLRRTQI-PTQFPMQVFEVAQQLLDSQP----PDPDTDRLDLTDLKVYTIDDESTREI 284

Query: 182 DDAMSWE--AD-TGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELAR 352
           DD +S E  AD   RLW+HIAD +  L PG+ L  EA RR+ T+YLPT  I M P ELA 
Sbjct: 285 DDGLSVEFMADGQQRLWIHIADPTRLLCPGDELDLEARRRTTTVYLPTGIIPMFPSELAT 344

Query: 353 DGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
             +SL           E     ALSFG  + E G + D  +  S I+  +RLTY+
Sbjct: 345 GPMSL----------VEGKLCCALSFGVILDESGQVKDYSIHASTIKPTYRLTYD 389

[25][TOP]
>UniRef100_B5W9J3 Exoribonuclease II n=1 Tax=Arthrospira maxima CS-328
           RepID=B5W9J3_SPIMA
          Length = 672

 Score = 95.1 bits (235), Expect = 2e-18
 Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 3/135 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEA---DTGRLWVHIADVSAWLKPGEPLTTEALRR 292
           R DL HL  Y +D  ST E+DD +S E     T ++W+HIAD +  + PG+ L  EA RR
Sbjct: 266 RFDLTHLKVYTIDDESTREIDDGVSLEFLEDGTQKIWIHIADPTRLITPGDELDLEARRR 325

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
           + ++YLPT  I M P ELA   +SL           +     ALSFG  + EDGSL D  
Sbjct: 326 TTSVYLPTGMIPMFPPELATGPMSL----------VQGKICCALSFGVVLNEDGSLKDYS 375

Query: 473 VMPSLIRRPWRLTYE 517
           +  S+I+  +RLTY+
Sbjct: 376 IHTSIIKPTYRLTYD 390

[26][TOP]
>UniRef100_Q4BZP1 Exoribonuclease II n=1 Tax=Crocosphaera watsonii WH 8501
           RepID=Q4BZP1_CROWT
          Length = 670

 Score = 94.4 bits (233), Expect = 4e-18
 Identities = 61/165 (36%), Positives = 87/165 (52%), Gaps = 3/165 (1%)
 Frame = +2

Query: 29  YPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMS---W 199
           YP  F  ++ + A+  +   P  ++      R DL  L  Y +D  ST E+DD +S    
Sbjct: 236 YPVNFPQKVLDVASSSVQTLPPDAD----GDRLDLTRLKVYTIDDESTEEIDDGLSVEYL 291

Query: 200 EADTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASN 379
           E D  +LW+HIAD +  + PG+ L  EA +RS TLYLPT  I+M PLELA   +SL    
Sbjct: 292 ENDQVKLWIHIADPTRLVTPGDELDLEARKRSTTLYLPTGMISMFPLELAAGPMSLC--- 348

Query: 380 GHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
                  +     ALSFG  +  +G++ D  +  SLI+  +RLTY
Sbjct: 349 -------QGQLCAALSFGVILDSEGAVVDYSIHASLIKPTYRLTY 386

[27][TOP]
>UniRef100_Q010V1 Ribonuclease II (ISS) n=1 Tax=Ostreococcus tauri RepID=Q010V1_OSTTA
          Length = 758

 Score = 93.6 bits (231), Expect = 7e-18
 Identities = 63/165 (38%), Positives = 91/165 (55%), Gaps = 3/165 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEA-D 208
           P  F  E  +    +L+  P  ++V  S+ R DL HL +YA+D A T EVDDA+S E+ D
Sbjct: 322 PIDFPQEALDECASILANPP--ADVDASS-RVDLTHLSAYAIDDAGTVEVDDAVSAESLD 378

Query: 209 TGRL--WVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
            GR+  WVH+AD S W+     L   A  R+ TLY PTE + M PL+++   +SL A   
Sbjct: 379 EGRIRVWVHVADPSRWVTMNSTLDITARGRATTLYYPTELVPMFPLDISAGPMSLGA--- 435

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
           +A  SE      A++    V  DG++ D  + PSL++   R TY+
Sbjct: 436 NAEASE------AMTIRADVDADGNIEDFDITPSLVKIDRRWTYD 474

[28][TOP]
>UniRef100_A9RXJ0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RXJ0_PHYPA
          Length = 717

 Score = 90.5 bits (223), Expect = 6e-17
 Identities = 61/165 (36%), Positives = 87/165 (52%), Gaps = 3/165 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW-EAD 208
           P  FS E  EAA  +++  PL + +     R DL HL  Y +DS    E+DD +S     
Sbjct: 288 PIEFSSECVEAAQSVMTNPPLDTNL---VNRVDLTHLKVYTIDSEDADEIDDGLSAIRLP 344

Query: 209 TGRL--WVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
            GR+  W+H+AD + W+ P   L  EA RRS ++YLPT  + M P+ LA   +SL    G
Sbjct: 345 DGRIKVWIHVADPTRWVPPMHLLDKEAKRRSTSIYLPTGAVPMFPMNLASTVMSL--RQG 402

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
           H      E   L +S  F    DGS+ + +VM S I+  +RL+Y+
Sbjct: 403 H------EACALTVSIIFHC--DGSIAESEVMCSTIKPTYRLSYD 439

[29][TOP]
>UniRef100_A8IJ46 3'-5' exoribonuclease II (Fragment) n=1 Tax=Chlamydomonas
           reinhardtii RepID=A8IJ46_CHLRE
          Length = 699

 Score = 90.5 bits (223), Expect = 6e-17
 Identities = 57/164 (34%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
 Frame = +2

Query: 35  PTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADTG 214
           P F  +++ AA  LL + P   + G    R DL HL  + +D A+T EVDD +S E   G
Sbjct: 340 PDFPADVERAAQALLDSPPPDPDAGN---REDLTHLRCFTIDDAATTEVDDGLSLERLAG 396

Query: 215 ---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGH 385
              R+W+H+AD + W+ P   L     +R  TLYLP  ++ M P  LA    SL A    
Sbjct: 397 GGTRIWIHVADPTRWISPDTQLDLAGRQRGRTLYLPWGSVPMFPRALAEGPFSLRAG--- 453

Query: 386 AHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                      ALS G  +  DGS+   +V PS +    +LTY+
Sbjct: 454 -------QVCDALSVGVELRPDGSVASARVAPSRVLVSHKLTYD 490

[30][TOP]
>UniRef100_A3RLY2 Chloroplast ribonuclease n=1 Tax=Chlamydomonas reinhardtii
            RepID=A3RLY2_CHLRE
          Length = 1083

 Score = 90.5 bits (223), Expect = 6e-17
 Identities = 57/164 (34%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
 Frame = +2

Query: 35   PTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADTG 214
            P F  +++ AA  LL + P   + G    R DL HL  + +D A+T EVDD +S E   G
Sbjct: 577  PDFPADVERAAQALLDSPPPDPDAGN---REDLTHLRCFTIDDAATTEVDDGLSLERLAG 633

Query: 215  ---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGH 385
               R+W+H+AD + W+ P   L     +R  TLYLP  ++ M P  LA    SL A    
Sbjct: 634  GGTRIWIHVADPTRWISPDTQLDLAGRQRGRTLYLPWGSVPMFPRALAEGPFSLRAG--- 690

Query: 386  AHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                       ALS G  +  DGS+   +V PS +    +LTY+
Sbjct: 691  -------QVCDALSVGVELRPDGSVASARVAPSRVLVSHKLTYD 727

[31][TOP]
>UniRef100_A0LG74 Exoribonuclease II n=1 Tax=Syntrophobacter fumaroxidans MPOB
           RepID=A0LG74_SYNFM
          Length = 680

 Score = 90.1 bits (222), Expect = 8e-17
 Identities = 66/164 (40%), Positives = 90/164 (54%), Gaps = 5/164 (3%)
 Frame = +2

Query: 41  FSPELQEAANGLL-SAGPLAS-EVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADTG 214
           F  E++E    +L SA P AS E  P   R DLRHLD   VDSA T + DDA+S+ A  G
Sbjct: 257 FPQEVEERVEVILHSARPGASGETEPQ--RRDLRHLDCLTVDSALTRDYDDALSFRALDG 314

Query: 215 RLW---VHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGH 385
             +   +HIAD + ++  G+ L  EA RR+ ++YLP   I+MLP+ L+ D  SL A    
Sbjct: 315 NRFEVGIHIADAAEFVLKGDVLDREAERRATSIYLPDARISMLPVPLSEDLCSLKAGEDR 374

Query: 386 AHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                      ALSF F V  DG++   +++ S IR   +LTYE
Sbjct: 375 P----------ALSFLFVVHGDGTIAGSEIVSSTIRVAEQLTYE 408

[32][TOP]
>UniRef100_A5GTC0 Exoribonuclease R/ribonuclease II n=1 Tax=Synechococcus sp. RCC307
           RepID=A5GTC0_SYNR3
          Length = 655

 Score = 87.0 bits (214), Expect = 7e-16
 Identities = 55/134 (41%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGRLW--VHIADVSAWLKPGEPLTTEALRRS 295
           R DL HL  +++DSAST EVDDA+  E   G LW  VHIAD   WL+PG+ L  EA RR 
Sbjct: 255 RRDLTHLSCFSIDSASTQEVDDAIGLERRDGDLWIWVHIADPHQWLEPGDRLDLEAQRRG 314

Query: 296 CTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQV 475
            TLYL    + M P+ +ARD +SL                 ALS G  +  DG++   + 
Sbjct: 315 STLYLSGGAMPMFPMAVARDCMSL----------RPMRRCGALSVGVLLDADGAITAVKP 364

Query: 476 MPSLIRRPWRLTYE 517
             S ++  + LTYE
Sbjct: 365 CRSWVKVSYGLTYE 378

[33][TOP]
>UniRef100_D0CJ15 Exoribonuclease II n=1 Tax=Synechococcus sp. WH 8109
           RepID=D0CJ15_9SYNE
          Length = 676

 Score = 86.7 bits (213), Expect = 9e-16
 Identities = 60/161 (37%), Positives = 86/161 (53%), Gaps = 2/161 (1%)
 Frame = +2

Query: 38  TFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADTGR 217
           +F+ +L E AN L++      E+     R DL HL +Y++D + T E+DDA+S E   G 
Sbjct: 254 SFTSDLVEEANRLVALSN--EELPGDEQRIDLTHLATYSLDDSGTREIDDALSLERRDGV 311

Query: 218 --LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAH 391
             +W+HIAD S  +    PL  EA RR+ +LYL    + MLPLELA   LSL A    A 
Sbjct: 312 DWIWIHIADPSRLIDIDSPLDHEARRRATSLYLAEGVMPMLPLELAAGPLSLRAGQRCA- 370

Query: 392 VSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
                    ALS    + +DG++ + ++  S IR  + LTY
Sbjct: 371 ---------ALSVAVCLDDDGAVAEQRIARSWIRPRYGLTY 402

[34][TOP]
>UniRef100_Q066Y3 Exoribonuclease II n=1 Tax=Synechococcus sp. BL107
           RepID=Q066Y3_9SYNE
          Length = 674

 Score = 86.3 bits (212), Expect = 1e-15
 Identities = 59/162 (36%), Positives = 86/162 (53%), Gaps = 3/162 (1%)
 Frame = +2

Query: 38  TFSPELQEAANGLLSAGPLASEVGPSAC-RTDLRHLDSYAVDSASTFEVDDAMSWEADTG 214
           TF+ EL+  A  L+S+   A++  P    R DL HL +Y +D A T E+DDA+S +   G
Sbjct: 252 TFAMELEHEAQRLISS---AAQPHPGDDDRLDLCHLATYTLDDAGTREIDDAVSLDVQNG 308

Query: 215 R--LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHA 388
              +WVHIAD +  + PG PL  EA RR+ +LYL    + MLPL LA   LSL A    A
Sbjct: 309 EVWIWVHIADPARLISPGSPLDQEARRRATSLYLADGVLPMLPLGLAAGPLSLRAGQRTA 368

Query: 389 HVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
                     A+S    +   G++ + ++  S ++  + LTY
Sbjct: 369 ----------AISVSVRLDSAGAIAERRIARSWVQPRYGLTY 400

[35][TOP]
>UniRef100_Q3AJZ2 Probable ribonuclease II n=1 Tax=Synechococcus sp. CC9605
           RepID=Q3AJZ2_SYNSC
          Length = 676

 Score = 85.5 bits (210), Expect = 2e-15
 Identities = 61/160 (38%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
 Frame = +2

Query: 41  FSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADTGR- 217
           F  +L E AN L++      E+     R DL HL +Y++D A T E+DDA+S E   G  
Sbjct: 255 FPSDLMEEANRLVALSE--EELPADEQRIDLTHLATYSLDDAGTREIDDALSLERRDGVN 312

Query: 218 -LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHV 394
            +W+HIAD S  +    PL  EA RR+ +LYL    + MLPLELA   LSL A    A  
Sbjct: 313 WIWIHIADPSRLIDIDSPLDQEARRRATSLYLAEGVMPMLPLELAAGPLSLRAGQRCA-- 370

Query: 395 SEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
                   ALS    +  DG++ + ++  S IR  + LTY
Sbjct: 371 --------ALSAAVHLDADGAVVEQRIARSWIRPRYGLTY 402

[36][TOP]
>UniRef100_B0C2J2 Exoribonuclease II n=1 Tax=Acaryochloris marina MBIC11017
           RepID=B0C2J2_ACAM1
          Length = 680

 Score = 85.5 bits (210), Expect = 2e-15
 Identities = 59/164 (35%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEA-- 205
           P  FS  +  A + LL   P        A R DL  L  Y +D  ST E+DD +S E   
Sbjct: 246 PVQFSSSVLAAVDQLLKMPPPDLH----AERHDLTSLKVYTIDDESTSEIDDGLSLEFLP 301

Query: 206 -DTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
               R+WVHIAD S W+  G+ L  EA RR  T+YLPT  I M P EL+   +SL     
Sbjct: 302 DGKQRVWVHIADPSRWITLGDELDQEAQRRGTTVYLPTGMIPMFPTELSTGPMSL----- 356

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
                 +     ALSFG  +  +G++   ++  S ++  +RLTY
Sbjct: 357 -----VQGQICCALSFGVILTAEGAIESYEIRCSQVQPTYRLTY 395

[37][TOP]
>UniRef100_A3Z2B9 Probable ribonuclease II n=1 Tax=Synechococcus sp. WH 5701
           RepID=A3Z2B9_9SYNE
          Length = 674

 Score = 83.6 bits (205), Expect = 7e-15
 Identities = 62/161 (38%), Positives = 78/161 (48%), Gaps = 3/161 (1%)
 Frame = +2

Query: 41  FSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADTG-- 214
           F+P L E A  LL+   L  E      R DL  L SY +D A T E+DDA++ E   G  
Sbjct: 253 FAPALLEDAEQLLAQAEL--EQPGDGSRRDLTALRSYTLDDADTEEIDDAVALELLDGGG 310

Query: 215 -RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAH 391
            RLWVHIAD    +  G PL  EA RR  +LYL    + M PL LA    SL        
Sbjct: 311 LRLWVHIADPGRLVASGSPLDLEARRRGSSLYLAAGVVPMFPLPLAVGPFSL-------- 362

Query: 392 VSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
              +     A S    +AEDGS+   +++ S I   +RLTY
Sbjct: 363 --RQGQRCAAWSCAVELAEDGSVARHELVRSWICPTYRLTY 401

[38][TOP]
>UniRef100_Q3AVJ3 Exoribonuclease II n=1 Tax=Synechococcus sp. CC9902
           RepID=Q3AVJ3_SYNS9
          Length = 674

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 58/167 (34%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           S  +   F+ EL++ A  L+ +   A        R DL HL +Y +D A T E+DD +S 
Sbjct: 246 SSVWSKKFAIELEDEAQQLILSA--AHPQPGDDDRLDLCHLATYTLDDAGTREIDDGISL 303

Query: 200 EADTGR--LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDA 373
           +   G   +WVHIAD +  + PG PL  EA RR+ +LYL    + MLPL LA   LSL A
Sbjct: 304 DDQNGEVWIWVHIADPARLIPPGSPLDQEARRRATSLYLADGVLPMLPLSLAAGPLSLRA 363

Query: 374 SNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
               A          A+S    +   G++ D ++  S +R  + LTY
Sbjct: 364 GERTA----------AVSVAVRLDSAGAIADRRIARSWVRPRYGLTY 400

[39][TOP]
>UniRef100_Q6NQJ6 At5g02250 n=1 Tax=Arabidopsis thaliana RepID=Q6NQJ6_ARATH
          Length = 803

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 60/165 (36%), Positives = 86/165 (52%), Gaps = 3/165 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMS-WEAD 208
           P   S  + EAA  LLS    +S++  +  R DL HL  YA+D     E+DDA+S     
Sbjct: 373 PTHHSEAITEAAEALLSE---SSDID-AVRRIDLTHLKVYAIDVDEADELDDALSATRLQ 428

Query: 209 TGRL--WVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
            GR+  W+H+AD + ++ PG  +  EA RR  +++LPT T  M P +LA +G+SL     
Sbjct: 429 DGRIKIWIHVADPARYVTPGSKVDREARRRGTSVFLPTATYPMFPEKLAMEGMSL----- 483

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                E  NAV   S    +  DG + +  V  S+IR  + LTYE
Sbjct: 484 --RQGENCNAV---SVSVVLRSDGCITEYSVDNSIIRPTYMLTYE 523

[40][TOP]
>UniRef100_B2GAM4 Ribonuclease R n=1 Tax=Lactobacillus fermentum IFO 3956
           RepID=B2GAM4_LACF3
          Length = 797

 Score = 80.5 bits (197), Expect = 6e-14
 Identities = 57/169 (33%), Positives = 86/169 (50%), Gaps = 3/169 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAM-S 196
           +H  P  F  E+ + AN +    PL  +    A R DL       +DS  + ++DDA+ +
Sbjct: 223 AHDVPHEFPKEVLDQANQI----PLTVQPEEKAGRPDLTDQPLVTIDSIESKDLDDAVVA 278

Query: 197 WEADTGR--LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           W+ D G   L VHIADVS +++PG PL  EA +R  ++YL    I MLP  L        
Sbjct: 279 WKLDNGNYHLGVHIADVSHYVQPGTPLDEEAFKRGTSVYLTDRVIPMLPRRL-------- 330

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
            SNG   ++  E   LA+S    +   G++   ++ PS+IR   R+TY+
Sbjct: 331 -SNGICSLNPGEER-LAMSCEMEIDPQGNIVSHEIFPSVIRSHARMTYK 377

[41][TOP]
>UniRef100_B0TW06 Ribonuclease II family protein n=1 Tax=Francisella philomiragia
           subsp. philomiragia ATCC 25017 RepID=B0TW06_FRAP2
          Length = 624

 Score = 80.5 bits (197), Expect = 6e-14
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
 Frame = +2

Query: 107 GPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADTGRLWVHIADVSAWLKPGEPLTTEAL 286
           G  + R DL HL +YA+D   + + DDA+SW+A   ++WVHIAD S+ +  G+ +  EA 
Sbjct: 233 GSDSQRVDLTHLTAYAIDDEGSNDPDDAISWDAQQNKMWVHIADPSSSISFGDEVDLEAR 292

Query: 287 RRSCTLYLPTETITMLPLELARD-GLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLG 463
            R   LY+P   ITMLP +  +  GL L            +    ALS GF + E G + 
Sbjct: 293 ARGSNLYVPEHIITMLPPQATQKLGLGL------------QEVSPALSVGFRLDESGDIH 340

Query: 464 DPQVMPSLIRRPWRLTYE 517
           D ++  S I +  R +YE
Sbjct: 341 DIEICFSNI-KVTRYSYE 357

[42][TOP]
>UniRef100_D0DTZ4 Ribonuclease R n=1 Tax=Lactobacillus fermentum 28-3-CHN
           RepID=D0DTZ4_LACFE
          Length = 797

 Score = 80.5 bits (197), Expect = 6e-14
 Identities = 57/169 (33%), Positives = 86/169 (50%), Gaps = 3/169 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAM-S 196
           +H  P  F  E+ + AN +    PL  +    A R DL       +DS  + ++DDA+ +
Sbjct: 223 AHDVPHEFPKEVLDQANQI----PLTVQPEEKAGRLDLTDQPLVTIDSIESKDLDDAVVA 278

Query: 197 WEADTGR--LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           W+ D G   L VHIADVS +++PG PL  EA +R  ++YL    I MLP  L        
Sbjct: 279 WKLDNGNYHLGVHIADVSHYVQPGTPLDEEAFKRGTSVYLTDRVIPMLPRRL-------- 330

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
            SNG   ++  E   LA+S    +   G++   ++ PS+IR   R+TY+
Sbjct: 331 -SNGICSLNPGEER-LAMSCEMEIDPQGNIVSHEIFPSVIRSHARMTYK 377

[43][TOP]
>UniRef100_C6YTB9 Ribonuclease II n=1 Tax=Francisella philomiragia subsp.
           philomiragia ATCC 25015 RepID=C6YTB9_9GAMM
          Length = 624

 Score = 80.5 bits (197), Expect = 6e-14
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
 Frame = +2

Query: 107 GPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADTGRLWVHIADVSAWLKPGEPLTTEAL 286
           G  + R DL HL +YA+D   + + DDA+SW+A   ++WVHIAD S+ +  G+ +  EA 
Sbjct: 233 GSDSQRVDLTHLTAYAIDDEGSNDPDDAISWDAQQNKMWVHIADPSSSISFGDEVDLEAR 292

Query: 287 RRSCTLYLPTETITMLPLELARD-GLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLG 463
            R   LY+P   ITMLP +  +  GL L            +    ALS GF + E G + 
Sbjct: 293 ARGSNLYVPEHIITMLPPQATQKLGLGL------------QEVSPALSVGFRLDESGDIH 340

Query: 464 DPQVMPSLIRRPWRLTYE 517
           D ++  S I +  R +YE
Sbjct: 341 DIEICFSNI-KVTRYSYE 357

[44][TOP]
>UniRef100_C0WWN2 Exoribonuclease R n=1 Tax=Lactobacillus fermentum ATCC 14931
           RepID=C0WWN2_LACFE
          Length = 797

 Score = 80.5 bits (197), Expect = 6e-14
 Identities = 57/169 (33%), Positives = 86/169 (50%), Gaps = 3/169 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAM-S 196
           +H  P  F  E+ + AN +    PL  +    A R DL       +DS  + ++DDA+ +
Sbjct: 223 AHDVPHEFPKEVLDQANQI----PLTVQPEEKAGRPDLTDQPLVTIDSIESKDLDDAVVA 278

Query: 197 WEADTGR--LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           W+ D G   L VHIADVS +++PG PL  EA +R  ++YL    I MLP  L        
Sbjct: 279 WKLDNGNYHLGVHIADVSHYVQPGTPLDEEAFKRGTSVYLTDRVIPMLPRRL-------- 330

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
            SNG   ++  E   LA+S    +   G++   ++ PS+IR   R+TY+
Sbjct: 331 -SNGICSLNPGEER-LAMSCEMEIDPQGNIVSHEIFPSVIRSHARMTYK 377

[45][TOP]
>UniRef100_Q72IG1 Putative ribonuclease n=1 Tax=Thermus thermophilus HB27
           RepID=Q72IG1_THET2
          Length = 599

 Score = 80.1 bits (196), Expect = 8e-14
 Identities = 57/137 (41%), Positives = 75/137 (54%), Gaps = 2/137 (1%)
 Frame = +2

Query: 110 PSACRTDLRHLDSYAVDSASTFEVDDAMSWEADTG--RLWVHIADVSAWLKPGEPLTTEA 283
           P   R DL HL ++A+D   + + DDA+  E   G  RL+VH+ADV+A + P  PL  EA
Sbjct: 220 PEEDRVDLTHLPAFAIDDEGSQDPDDAVFAEKVEGGFRLFVHVADVAALVPPKSPLDEEA 279

Query: 284 LRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLG 463
           LRR   LYLP  T+ MLP     + L L    G   VS       AL+F   V+E+G L 
Sbjct: 280 LRRGANLYLPEGTVPMLP-PAVTEALGL----GLREVSP------ALTFELWVSEEGELL 328

Query: 464 DPQVMPSLIRRPWRLTY 514
           + +V PS + R  RLTY
Sbjct: 329 EERVYPSWV-RVTRLTY 344

[46][TOP]
>UniRef100_Q5SI46 Ribonuclease II family protein n=1 Tax=Thermus thermophilus HB8
           RepID=Q5SI46_THET8
          Length = 598

 Score = 80.1 bits (196), Expect = 8e-14
 Identities = 57/137 (41%), Positives = 75/137 (54%), Gaps = 2/137 (1%)
 Frame = +2

Query: 110 PSACRTDLRHLDSYAVDSASTFEVDDAMSWEADTG--RLWVHIADVSAWLKPGEPLTTEA 283
           P   R DL HL ++A+D   + + DDA+  E   G  RL+VH+ADV+A + P  PL  EA
Sbjct: 219 PEEDRVDLTHLPAFAIDDEGSQDPDDAVFAEKVEGGFRLFVHVADVAALVPPKSPLDEEA 278

Query: 284 LRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLG 463
           LRR   LYLP  T+ MLP     + L L    G   VS       AL+F   V+E+G L 
Sbjct: 279 LRRGANLYLPEGTVPMLP-PAVTEALGL----GLREVSP------ALTFELWVSEEGELL 327

Query: 464 DPQVMPSLIRRPWRLTY 514
           + +V PS + R  RLTY
Sbjct: 328 EERVYPSWV-RVTRLTY 343

[47][TOP]
>UniRef100_C9RAV4 Ribonuclease R n=1 Tax=Ammonifex degensii KC4 RepID=C9RAV4_9THEO
          Length = 715

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 60/164 (36%), Positives = 81/164 (49%), Gaps = 3/164 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEA-- 205
           P  F PE++E A  +    PL       A R DLR      +D     ++DDA+S E   
Sbjct: 218 PDGFPPEVEEEAENI----PLTIRPEELAGRRDLREWLIVTIDGEDAKDLDDAVSLELLH 273

Query: 206 -DTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
             T RL VHIADVS +++ G  L  EA +R  ++YLP   I MLP  L         SNG
Sbjct: 274 DGTYRLGVHIADVSYYVREGSALDREAFQRGTSIYLPDRVIPMLPPRL---------SNG 324

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
              ++ EE+  L LS    V   G + + ++ PS+IR   RLTY
Sbjct: 325 ICSLNPEEDR-LTLSVLMRVDSKGEVLEYELFPSVIRSKARLTY 367

[48][TOP]
>UniRef100_A7PNN2 Chromosome chr8 scaffold_23, whole genome shotgun sequence n=2
           Tax=Vitis vinifera RepID=A7PNN2_VITVI
          Length = 702

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 3/162 (1%)
 Frame = +2

Query: 41  FSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMS-WEADTGR 217
           +  E+  AA  LLS      EV     R DL HL  YA+D     E+DDA+S      GR
Sbjct: 276 YPDEVISAAENLLSEPFDPDEVD----RKDLTHLKVYAIDVDEADELDDALSATRLLDGR 331

Query: 218 L--WVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAH 391
           +  W+H+AD ++ ++PG  +  EA++R  +++LPT T  M P +LA +G+SL        
Sbjct: 332 IKVWIHVADPTSLIQPGSIVDREAMKRGTSIFLPTATYPMFPEKLAMEGMSL-------- 383

Query: 392 VSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
             ++     A++    +  DGS+ +  V  S+I+  + LTYE
Sbjct: 384 --KQGELCNAVTVSVVLHSDGSIAECTVDNSIIKPTYMLTYE 423

[49][TOP]
>UniRef100_B9HBM5 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HBM5_POPTR
          Length = 792

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 46/135 (34%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMS-WEADTGRL--WVHIADVSAWLKPGEPLTTEALRR 292
           R DL HL  YA+D     E+DDA+S      GR+  W+H+AD + +++PG  +  EA+RR
Sbjct: 388 RKDLTHLKVYAIDVDEADELDDALSATRLQDGRIKVWIHVADPARYVQPGSKVDREAMRR 447

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             +++LPT T  M P +LA +G+SL          ++     A++    +  DG + +  
Sbjct: 448 GTSVFLPTATYPMFPEKLAMEGMSL----------KQGEVCNAVTVSVILHSDGCIAEYS 497

Query: 473 VMPSLIRRPWRLTYE 517
           V  S+I+  + LTYE
Sbjct: 498 VDNSIIKPTYMLTYE 512

[50][TOP]
>UniRef100_C1XVL5 Exoribonuclease R n=1 Tax=Meiothermus silvanus DSM 9946
           RepID=C1XVL5_9DEIN
          Length = 602

 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 52/130 (40%), Positives = 73/130 (56%), Gaps = 2/130 (1%)
 Frame = +2

Query: 110 PSACRTDLRHLDSYAVDSASTFEVDDAMSWEADTG--RLWVHIADVSAWLKPGEPLTTEA 283
           P   RTDL HL++YA+D   + + DDA+  E   G  RL VH+ADV+A ++PG  L  EA
Sbjct: 220 PEEERTDLTHLEAYAIDDEGSQDPDDAVWAERTEGGFRLLVHVADVAALVEPGSLLDQEA 279

Query: 284 LRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLG 463
           + R   LYLP  T+ MLP   A + L L    G   +S       AL+F   V+E+G L 
Sbjct: 280 MHRGANLYLPEGTVPMLP-PRATEVLGL----GLQEISP------ALTFALFVSEEGELL 328

Query: 464 DPQVMPSLIR 493
           + ++ PS +R
Sbjct: 329 EERLFPSWVR 338

[51][TOP]
>UniRef100_C7JES0 Ribonuclease R n=8 Tax=Acetobacter pasteurianus RepID=C7JES0_ACEP3
          Length = 676

 Score = 78.2 bits (191), Expect = 3e-13
 Identities = 57/166 (34%), Positives = 78/166 (46%), Gaps = 3/166 (1%)
 Frame = +2

Query: 29  YPPTFSPELQEAANGLLSAGPLASEVGPSAC-RTDLRHLDSYAVDSASTFEVDDAMSWE- 202
           +PPT   E  EA    ++    A +  P+   RTDLRHL    +D AS  + DDA+  E 
Sbjct: 228 HPPTAFSEQAEAEARQIAQQNAALQGAPAPSGRTDLRHLPLITIDDASAHDFDDALWAEQ 287

Query: 203 -ADTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASN 379
            AD   L V IADV+ W+KPG  L  EA  R  ++YLP + + MLPL L+    SL    
Sbjct: 288 TADGFHLIVAIADVAHWVKPGSALDEEARERGNSIYLPDKVVPMLPLALSAQACSLLPGQ 347

Query: 380 GHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                       L L     +   G +   Q+   +++   RLTYE
Sbjct: 348 DR----------LCLFADMHITPQGHVVSAQINRGIMQSAARLTYE 383

[52][TOP]
>UniRef100_C7XW39 Ribonuclease R n=1 Tax=Lactobacillus coleohominis 101-4-CHN
           RepID=C7XW39_9LACO
          Length = 799

 Score = 77.0 bits (188), Expect = 7e-13
 Identities = 56/169 (33%), Positives = 83/169 (49%), Gaps = 3/169 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAM-S 196
           +H  P  F  E  E AN +    PL         R D+       +DS  + ++DDA+ +
Sbjct: 239 AHDVPHEFPKEAMEQANKI----PLKVLPEEKQGRKDITKQPLVTIDSIESKDLDDAVVA 294

Query: 197 WEADTGR--LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           W+ D G   L VHIADVS +++PG PL  EA +R  ++YL    I MLP  L        
Sbjct: 295 WKMDNGHYHLGVHIADVSHYVQPGTPLDEEAFKRGTSVYLTDRVIPMLPRRL-------- 346

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
            SNG   ++  E   LA+S    + E G++    + PS+I+   R+TY+
Sbjct: 347 -SNGICSLNPNEER-LAMSCEMEIDEQGNILKHDIFPSVIKSHARMTYK 393

[53][TOP]
>UniRef100_A6NVY9 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus
           ATCC 29799 RepID=A6NVY9_9BACE
          Length = 710

 Score = 77.0 bits (188), Expect = 7e-13
 Identities = 57/164 (34%), Positives = 79/164 (48%), Gaps = 3/164 (1%)
 Frame = +2

Query: 35  PTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADTG 214
           P F P + +AA    +  P   E      RTDLR+     +D AS+ ++DDA+S E D  
Sbjct: 164 PEFPPAVLDAA----ARAPREVEKDALTGRTDLRNRIIITIDGASSKDLDDAVSLERDEQ 219

Query: 215 RLWV---HIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGH 385
             WV   HIADVS +++   PL  EA  R  ++Y     I MLP+EL+    SL+     
Sbjct: 220 GRWVLGVHIADVSHYVQEKSPLDLEAWERGTSVYFADRVIPMLPVELSNGICSLNPGVDR 279

Query: 386 AHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                     L +S   T+A DG   D  +  S+IR   R+TYE
Sbjct: 280 ----------LTISCFMTLAADGREEDHTICKSVIRSTERMTYE 313

[54][TOP]
>UniRef100_Q2RLT1 Ribonuclease R n=1 Tax=Moorella thermoacetica ATCC 39073
           RepID=Q2RLT1_MOOTA
          Length = 770

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 57/162 (35%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
 Frame = +2

Query: 41  FSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEA---DT 211
           F PE+   A  +    P   E G  A R DLR      +D A   ++DDA+S E     +
Sbjct: 218 FPPEVIREAEEI----PRDLEPGELAKRRDLRDWRLVTIDGADARDLDDAVSLERRPDGS 273

Query: 212 GRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAH 391
             L VHIADVS +++ G PL  EA  R  ++Y     I MLP  L+ D  SL+A      
Sbjct: 274 YLLGVHIADVSFYVREGRPLDREAFNRGTSVYFVDRVIPMLPARLSNDICSLNA------ 327

Query: 392 VSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
             E+  A+ AL    T++  G++ D ++ PS+IR   R+TY+
Sbjct: 328 -GEDRLAITAL---MTISPAGTVKDYELFPSVIRVRERMTYD 365

[55][TOP]
>UniRef100_C1ZVI5 Exoribonuclease R n=1 Tax=Rhodothermus marinus DSM 4252
           RepID=C1ZVI5_RHOMR
          Length = 659

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 59/164 (35%), Positives = 79/164 (48%), Gaps = 3/164 (1%)
 Frame = +2

Query: 35  PTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWE--AD 208
           PTF  E+  AA  L+   P          RTD  HL ++ +D AST E+DDA + E  A+
Sbjct: 241 PTFPSEVLAAAEALVPFEPTGD-------RTDFTHLPAFHIDDASTREIDDAFTVEPLAE 293

Query: 209 TG-RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGH 385
            G R+ +H+ADV  ++ P + L  EA RR  T YLPT +I MLP  L+ D  SL      
Sbjct: 294 GGWRIGIHLADVPHFVAPDDVLDREARRRGLTRYLPTGSIPMLPERLSHDLASL------ 347

Query: 386 AHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                 +     LS   TV     + D Q++   IR     TYE
Sbjct: 348 ----RPDAIRPTLSVVVTVDASEQIRDVQLVRGQIRVAHGFTYE 387

[56][TOP]
>UniRef100_Q1J2E9 Ribonuclease II, VacB-like protein n=1 Tax=Deinococcus geothermalis
           DSM 11300 RepID=Q1J2E9_DEIGD
          Length = 469

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 63/180 (35%), Positives = 82/180 (45%), Gaps = 24/180 (13%)
 Frame = +2

Query: 47  PELQEAANGLL--------SAGPLASEVG-------------PSACRTDLRHLDSYAVDS 163
           PE  EAA+ LL        +  P A  +G             P   R DL  L +YA+D 
Sbjct: 39  PETPEAAHALLLRLGLWDEARTPYAERLGAALTPVTLAVPDFPEEARLDLTQLPAYAIDD 98

Query: 164 ASTFEVDDAMSWEADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITML 334
               + DDA+  E   G   RLWVH+ADV+A +  G PL  EA  R  TLYLP  TI ML
Sbjct: 99  EGNRDPDDAVGIEVLGGGLTRLWVHVADVAALVPAGSPLDEEARARGATLYLPDRTIGML 158

Query: 335 PLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
           P     D L   A  G + ++       ALS    + E+G+    +V  + + R  RLTY
Sbjct: 159 P-----DALVERAGLGLSEITP------ALSIALDLDEEGNADAVEVQLTRV-RVQRLTY 206

[57][TOP]
>UniRef100_A0Q479 Ribonuclease II family protein n=2 Tax=Francisella novicida
           RepID=A0Q479_FRATN
          Length = 618

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGRLWVHIADVSAWLKPGEPLTTEALRRSCT 301
           R DL HL +YA+D   + + DDA+SW++   ++WVHIAD S+ +  G+ +  +A  R   
Sbjct: 232 RVDLTHLKAYAIDDEGSNDPDDAISWDSQKNKMWVHIADPSSSISFGDEIDLQARARGSN 291

Query: 302 LYLPTETITMLPLE-LARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVM 478
           LY+P + + MLP +  A+ GL L            +    A+S GF + E G + D ++ 
Sbjct: 292 LYVPEQIVMMLPPQATAKLGLGL------------QEVSPAVSVGFRIDEQGDIHDIEIC 339

Query: 479 PSLIRRPWRLTYE 517
            S I +  R +YE
Sbjct: 340 FSNI-KVTRYSYE 351

[58][TOP]
>UniRef100_B2SE32 Ribonuclease II family protein n=1 Tax=Francisella tularensis
           subsp. mediasiatica FSC147 RepID=B2SE32_FRATM
          Length = 618

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGRLWVHIADVSAWLKPGEPLTTEALRRSCT 301
           R DL HL +YA+D   + + DDA+SW++   ++WVHIAD S+ +  G+ +  +A  R   
Sbjct: 232 RVDLTHLKAYAIDDEGSNDPDDAISWDSQKNKMWVHIADPSSSISFGDEVDLQARARGSN 291

Query: 302 LYLPTETITMLPLE-LARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVM 478
           LY+P + + MLP +  A+ GL L            +    A+S GF + E G + D ++ 
Sbjct: 292 LYVPEQIVMMLPPQATAKLGLGL------------QEVSPAVSVGFRIDEQGDIHDIEIC 339

Query: 479 PSLIRRPWRLTYE 517
            S I +  R +YE
Sbjct: 340 FSNI-KVTRYSYE 351

[59][TOP]
>UniRef100_A4IZY2 Ribonuclease II family protein n=1 Tax=Francisella tularensis
           subsp. tularensis WY96-3418 RepID=A4IZY2_FRATW
          Length = 618

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGRLWVHIADVSAWLKPGEPLTTEALRRSCT 301
           R DL HL +YA+D   + + DDA+SW++   ++WVHIAD S+ +  G+ +  +A  R   
Sbjct: 232 RVDLTHLKAYAIDDEGSNDPDDAISWDSQKNKMWVHIADPSSSISFGDEVDLQARARGSN 291

Query: 302 LYLPTETITMLPLE-LARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVM 478
           LY+P + + MLP +  A+ GL L            +    A+S GF + E G + D ++ 
Sbjct: 292 LYVPEQIVMMLPPQATAKLGLGL------------QEVSPAVSVGFRIDEQGDIHDIEIC 339

Query: 479 PSLIRRPWRLTYE 517
            S I +  R +YE
Sbjct: 340 FSNI-KVTRYSYE 351

[60][TOP]
>UniRef100_C5S9Y8 Ribonuclease II n=1 Tax=Allochromatium vinosum DSM 180
           RepID=C5S9Y8_CHRVI
          Length = 608

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 51/133 (38%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGRLWVHIADVSAWLKPGEPLTTEALRRSCT 301
           R DL HL +YA+D     + DDA+S + D  RLWVH+ADV A ++P   L  EA  R   
Sbjct: 232 RLDLTHLPAYAIDDEGNQDPDDALSLDGD--RLWVHVADVGALVRPDSELEREARARGSN 289

Query: 302 LYLPTETITMLPLELARD-GLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVM 478
           LYLP   + MLP  +    GL L            +    ALSF      DG L D +V 
Sbjct: 290 LYLPEGVVNMLPWRVTEHLGLGL------------QEVSPALSFALRCDADGELRDIEVH 337

Query: 479 PSLIRRPWRLTYE 517
            + + R  RL+YE
Sbjct: 338 RTWV-RVTRLSYE 349

[61][TOP]
>UniRef100_A4BLZ8 Ribonuclease R n=1 Tax=Nitrococcus mobilis Nb-231
           RepID=A4BLZ8_9GAMM
          Length = 773

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 2/169 (1%)
 Frame = +2

Query: 17  ASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMS 196
           ++H  P  +  E++ A  G     P +++ G    R DLRHL    +D AS  + DDA+ 
Sbjct: 237 SAHGIPVDWPAEVEAALAGYTDRVPESAKQG----RVDLRHLPLVTIDGASARDFDDAVY 292

Query: 197 WEADTG--RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
            E  T   RL+V IADVS +++PG PL  EA++R  ++Y P   + MLP  L        
Sbjct: 293 AEPMTNGWRLYVAIADVSHYVRPGTPLEREAVKRGNSVYFPRSVVPMLPAIL-------- 344

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
            SNG   ++   +  L +     ++++G+L   +   +++R   RLTYE
Sbjct: 345 -SNGLCSLNPRVDR-LCVVCEMQISQEGALRRSRFYEAVMRSRARLTYE 391

[62][TOP]
>UniRef100_Q14JI5 Ribonuclease II family protein n=3 Tax=Francisella tularensis
           subsp. tularensis RepID=Q14JI5_FRAT1
          Length = 618

 Score = 75.1 bits (183), Expect = 3e-12
 Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGRLWVHIADVSAWLKPGEPLTTEALRRSCT 301
           R DL HL +YA+D   + + DDA+SW++   ++WVHIAD S+ +  G+ +  +A  R   
Sbjct: 232 RVDLTHLKAYAIDDEGSNDPDDAISWDSKKNKMWVHIADPSSSISFGDEVDLQARARGSN 291

Query: 302 LYLPTETITMLPLE-LARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVM 478
           LY+P + + MLP +  A+ GL L            +    A+S GF + E G + D ++ 
Sbjct: 292 LYVPEQIVMMLPPQATAKLGLGL------------QEVSPAVSVGFRIDEQGDIHDIEIC 339

Query: 479 PSLIRRPWRLTYE 517
            S I +  R +YE
Sbjct: 340 FSNI-KVTRYSYE 351

[63][TOP]
>UniRef100_Q9RYD0 Ribonuclease II family protein n=1 Tax=Deinococcus radiodurans
           RepID=Q9RYD0_DEIRA
          Length = 461

 Score = 74.7 bits (182), Expect = 3e-12
 Identities = 48/113 (42%), Positives = 63/113 (55%), Gaps = 4/113 (3%)
 Frame = +2

Query: 41  FSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADTG-- 214
           ++  L+ A N +    P   +  P+  R DL HL ++A+D     + DDA+  E   G  
Sbjct: 57  YADRLRAALNAVELPVP---DFDPAEERLDLTHLPTFAIDDEGNQDPDDAVGVEDLGGGL 113

Query: 215 -RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLEL-ARDGLSL 367
            RLWVH+ADV+A + P  PL  EA  R  TLYLP  TI MLP EL A+ GL L
Sbjct: 114 TRLWVHVADVAALVAPDSPLDLEARARGATLYLPDRTIGMLPDELVAKAGLGL 166

[64][TOP]
>UniRef100_UPI000185547B ribonuclease II family protein n=1 Tax=Francisella novicida FTG
           RepID=UPI000185547B
          Length = 618

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGRLWVHIADVSAWLKPGEPLTTEALRRSCT 301
           R DL HL +YA+D   + + DDA+SW++   ++WVHIAD S+ +  G+ +  +A  R   
Sbjct: 232 RVDLTHLKAYAIDDEGSNDPDDAISWDSQKNKMWVHIADPSSSISFGDEIDLQARARGSN 291

Query: 302 LYLPTETITMLPLE-LARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVM 478
           LY+P + + MLP +  A+ GL L            +    A+S GF + + G + D ++ 
Sbjct: 292 LYVPEQIVMMLPPQATAKLGLGL------------QEVSPAVSVGFRIDKQGDIHDIEIC 339

Query: 479 PSLIRRPWRLTYE 517
            S I +  R +YE
Sbjct: 340 FSNI-KVTRYSYE 351

[65][TOP]
>UniRef100_Q7U6W2 Probable ribonuclease II n=1 Tax=Synechococcus sp. WH 8102
           RepID=Q7U6W2_SYNPX
          Length = 682

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGR--LWVHIADVSAWLKPGEPLTTEALRRS 295
           R DL     Y +D +ST E+DD ++ E   G   +W+HIAD +  ++P  PL  EA RR+
Sbjct: 286 RVDLTAQRVYTLDDSSTKEIDDGLALEPGDGGPWIWIHIADPARLIEPDSPLDREARRRA 345

Query: 296 CTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQV 475
            +LYL    + MLPL+LA +  SL A               ALS G  + ++G++     
Sbjct: 346 TSLYLANGVLPMLPLKLATEIFSLRAG----------QRCPALSVGVLLDDEGAVVASSC 395

Query: 476 MPSLIRRPWRLTYE 517
             S ++  +RLTYE
Sbjct: 396 QRSWVQPRYRLTYE 409

[66][TOP]
>UniRef100_Q1WSY6 Ribonuclease R 1 n=1 Tax=Lactobacillus salivarius UCC118
           RepID=Q1WSY6_LACS1
          Length = 799

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
 Frame = +2

Query: 5   LELRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVD 184
           LE+   H  P  F  E+ E  + +        +VG    R DL   D   +DS  + ++D
Sbjct: 227 LEIVYQHNIPTEFPEEVLEQISKIPDYVTEEEKVG----RVDLTDQDLVTIDSIESKDLD 282

Query: 185 DAMS-WEADTGR--LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARD 355
           DA++ W+   G   L VHIADVS ++KP  PL  EA  R  ++YL    I MLP +L+  
Sbjct: 283 DAVNVWKLPNGNYHLGVHIADVSHYVKPKTPLDKEAFERGTSVYLTDRVIPMLPPKLSNG 342

Query: 356 GLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
             SL     + HV       LA++    +  DG + + ++ PS+I+   R+TY+
Sbjct: 343 ICSL-----NPHVER-----LAMTCEMEINADGEVVNHKIFPSVIKSTERMTYK 386

[67][TOP]
>UniRef100_C1D045 Putative ribonuclease n=1 Tax=Deinococcus deserti VCD115
           RepID=C1D045_DEIDV
          Length = 462

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 53/135 (39%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTG---RLWVHIADVSAWLKPGEPLTTEALRR 292
           R DL HL++YA+D     + DDA+  E   G   RLWVH+ADV+A + P   L  EA  R
Sbjct: 82  RLDLTHLEAYAIDDEGNRDPDDAVGIEMLDGGLTRLWVHVADVAALVPPDSALDLEARSR 141

Query: 293 SCTLYLPTETITMLPLELA-RDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDP 469
             TLYLP +TI MLP EL  + GL L  +              ALS    +  DG+    
Sbjct: 142 GATLYLPDQTIGMLPDELVEKTGLGLHPTTP------------ALSIALDLDHDGNADAV 189

Query: 470 QVMPSLIRRPWRLTY 514
            V  + +R   RLTY
Sbjct: 190 DVHLTTVRVE-RLTY 203

[68][TOP]
>UniRef100_C2EG81 Ribonuclease R1 n=1 Tax=Lactobacillus salivarius ATCC 11741
           RepID=C2EG81_9LACO
          Length = 799

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
 Frame = +2

Query: 5   LELRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVD 184
           LE+   H  P  F  E+ E  + +        +VG    R DL   D   +DS  + ++D
Sbjct: 227 LEIVYQHNIPTEFPEEVLEQISKIPDYVTEEEKVG----RVDLTDQDLVTIDSIESKDLD 282

Query: 185 DAMS-WEADTGR--LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARD 355
           DA++ W+   G   L VHIADVS ++KP  PL  EA  R  ++YL    I MLP +L+  
Sbjct: 283 DAVNVWKLPNGNYHLGVHIADVSHYVKPKTPLDKEAFERGTSVYLTDRVIPMLPPKLSNG 342

Query: 356 GLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
             SL     + HV       LA++    +  DG + + ++ PS+I+   R+TY+
Sbjct: 343 ICSL-----NPHVER-----LAMTCEMEINADGEVVNHKIFPSVIKSTERMTYK 386

[69][TOP]
>UniRef100_A7YRE1 Putative uncharacterized protein n=1 Tax=Francisella tularensis
           subsp. holarctica FSC022 RepID=A7YRE1_FRATU
          Length = 618

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGRLWVHIADVSAWLKPGEPLTTEALRRSCT 301
           R DL HL +YA+D   + + DDA+SW++   ++WVHI+D S+ +  G+ +  +A  R   
Sbjct: 232 RVDLTHLKAYAIDDEGSNDPDDAISWDSQKNKMWVHISDPSSSISFGDEVDLQARARGSN 291

Query: 302 LYLPTETITMLPLE-LARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVM 478
           LY+P + + MLP +  A+ GL L            +    A+S GF + E G + D ++ 
Sbjct: 292 LYVPEQIVMMLPPQATAKLGLGL------------QEVSPAVSVGFRIDEQGDIHDIEIC 339

Query: 479 PSLIRRPWRLTYE 517
            S I +  R +YE
Sbjct: 340 FSNI-KVTRYSYE 351

[70][TOP]
>UniRef100_A7JFK7 Ribonuclease II family protein n=1 Tax=Francisella novicida
           GA99-3549 RepID=A7JFK7_FRANO
          Length = 618

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGRLWVHIADVSAWLKPGEPLTTEALRRSCT 301
           R DL HL +YA+D   + + DDA+SW++   ++WVHIAD S+ +  G+ +  +A  R   
Sbjct: 232 RVDLTHLKAYAIDDEGSKDPDDAISWDSQKNKMWVHIADPSSSISFGDEIDLQARARGSN 291

Query: 302 LYLPTETITMLPLE-LARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVM 478
           LY+P + + MLP +  A+ GL L            +    A+S GF + + G + D ++ 
Sbjct: 292 LYVPEQIVMMLPPQATAKLGLGL------------QEVSPAVSVGFRIDKQGDIHDIEIC 339

Query: 479 PSLIRRPWRLTYE 517
            S I +  R +YE
Sbjct: 340 FSNI-KVTRYSYE 351

[71][TOP]
>UniRef100_A7N9H4 Ribonuclease II (RNB-like) family protein n=4 Tax=Francisella
           tularensis subsp. holarctica RepID=A7N9H4_FRATF
          Length = 616

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGRLWVHIADVSAWLKPGEPLTTEALRRSCT 301
           R DL HL +YA+D   + + DDA+SW++   ++WVHI+D S+ +  G+ +  +A  R   
Sbjct: 232 RVDLTHLKAYAIDDEGSNDPDDAISWDSQKNKMWVHISDPSSSISFGDEVDLQARARGSN 291

Query: 302 LYLPTETITMLPLE-LARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVM 478
           LY+P + + MLP +  A+ GL L            +    A+S GF + E G + D ++ 
Sbjct: 292 LYVPEQIVMMLPPQATAKLGLGL------------QEVSPAVSVGFRIDEQGDIHDIEIC 339

Query: 479 PSLIRRPWRLTYE 517
            S I +  R +YE
Sbjct: 340 FSNI-KVTRYSYE 351

[72][TOP]
>UniRef100_B9T6X7 Ribonuclease II, putative n=1 Tax=Ricinus communis
           RepID=B9T6X7_RICCO
          Length = 731

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
 Frame = +2

Query: 5   LELRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVD 184
           L +R  H      S E+  AA  LL    L S       R DL HL  YA+D     E+D
Sbjct: 359 LNIRTDH------SDEILSAAENLL----LESVDPDKIHRKDLTHLKVYAIDVDEADELD 408

Query: 185 DAMS-WEADTGRL--WVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARD 355
           DA+S  +   GR+  W+H+AD   +++PG  +  EA++R  +++LPT T  M P +LA D
Sbjct: 409 DALSATKLQDGRIKIWIHVADPGRYVQPGSKIDREAMKRGTSVFLPTATYPMFPEKLAMD 468

Query: 356 GLSL 367
           G+SL
Sbjct: 469 GMSL 472

[73][TOP]
>UniRef100_A5CVS5 Ribonuclease II family protein n=1 Tax=Candidatus Vesicomyosocius
           okutanii HA RepID=A5CVS5_VESOH
          Length = 601

 Score = 73.9 bits (180), Expect = 6e-12
 Identities = 50/157 (31%), Positives = 81/157 (51%)
 Frame = +2

Query: 23  HFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWE 202
           +++ P F+P      N +L    + + +     R DL HL SYA+D+  + + DDA+S +
Sbjct: 190 NYFKPGFNP--YPTRNNILKDDQIDASI-VKVDRVDLTHLSSYAIDNFDSNDADDAISVD 246

Query: 203 ADTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
            D  ++W+HIADVS     G  L + A +R+  LYLP + I MLP+ + +          
Sbjct: 247 GD--KIWIHIADVSLIATAGSELDSYAQKRASNLYLPEQIIHMLPISVTKMCALGLTETS 304

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIR 493
           H           ALS GFT+ E G + + +V+ S+I+
Sbjct: 305 H-----------ALSIGFTL-ELGEINNVEVVRSIIK 329

[74][TOP]
>UniRef100_C8R2V9 Exoribonuclease II n=1 Tax=Desulfurivibrio alkaliphilus AHT2
           RepID=C8R2V9_9DELT
          Length = 682

 Score = 73.6 bits (179), Expect = 8e-12
 Identities = 48/134 (35%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWE--ADTGRLWVHIADVSAWLKPGEPLTTEALRRS 295
           R DLRHL    +D  ST ++DDA+  E   +   + +HIADV+ ++KPG  L   A+ R 
Sbjct: 293 RVDLRHLPVLTIDGKSTRDLDDALHLERQGENFVVGIHIADVAHYVKPGSLLFKTAVERV 352

Query: 296 CTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQV 475
            +LY P   + MLP  L+ D  SL A               A+SF  T+  DG +   ++
Sbjct: 353 TSLYFPEGQVPMLPPRLSEDLCSLVAGRDRP----------AMSFLVTLTPDGDIVSSRI 402

Query: 476 MPSLIRRPWRLTYE 517
           + S+IR   RL YE
Sbjct: 403 VASVIRVARRLDYE 416

[75][TOP]
>UniRef100_C2F2N3 Exoribonuclease R n=2 Tax=Lactobacillus reuteri RepID=C2F2N3_LACRE
          Length = 801

 Score = 73.6 bits (179), Expect = 8e-12
 Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 3/169 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAM-S 196
           +H  P  F  E+ E AN +    PL         R D+       +D+  + ++DDA+ +
Sbjct: 226 AHDVPHEFPKEVMEQANKI----PLHVLPEEKKGRVDITDQPLVTIDAIESKDLDDAVVA 281

Query: 197 WEADTGR--LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           W+ D G   L VHIADV+ ++KPG PL  EA +R  ++YL    + MLP  L        
Sbjct: 282 WKMDNGHYHLGVHIADVTHYVKPGTPLDQEAFKRGTSVYLTDRVVPMLPKRL-------- 333

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
            SNG   ++  E   LA+S    + E G + + ++  S+++   R+TY+
Sbjct: 334 -SNGICSLNPNEER-LAMSCEMEIDEQGKIVNHRIFQSVMKSHARMTYK 380

[76][TOP]
>UniRef100_A5VII9 Ribonuclease R n=4 Tax=Lactobacillus reuteri RepID=A5VII9_LACRD
          Length = 801

 Score = 73.6 bits (179), Expect = 8e-12
 Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 3/169 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAM-S 196
           +H  P  F  E+ E AN +    PL         R D+       +D+  + ++DDA+ +
Sbjct: 226 AHDVPHEFPKEVMEQANKI----PLHVLPEEKKGRVDITDQPLVTIDAIESKDLDDAVVA 281

Query: 197 WEADTGR--LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           W+ D G   L VHIADV+ ++KPG PL  EA +R  ++YL    + MLP  L        
Sbjct: 282 WKMDNGHYHLGVHIADVTHYVKPGTPLDQEAFKRGTSVYLTDRVVPMLPKRL-------- 333

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
            SNG   ++  E   LA+S    + E G + + ++  S+++   R+TY+
Sbjct: 334 -SNGICSLNPNEER-LAMSCEMEIDEQGKIVNHRIFQSVMKSHARMTYK 380

[77][TOP]
>UniRef100_B3XQY8 Ribonuclease R n=1 Tax=Lactobacillus reuteri 100-23
           RepID=B3XQY8_LACRE
          Length = 801

 Score = 73.6 bits (179), Expect = 8e-12
 Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 3/169 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAM-S 196
           +H  P  F  E+ E AN +    PL         R D+       +D+  + ++DDA+ +
Sbjct: 226 AHDVPHEFPKEVMEQANKI----PLHVLPEEKKGRVDITDQPLVTIDAIESKDLDDAVVA 281

Query: 197 WEADTGR--LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           W+ D G   L VHIADV+ ++KPG PL  EA +R  ++YL    + MLP  L        
Sbjct: 282 WKMDNGHYHLGVHIADVTHYVKPGTPLDQEAFKRGTSVYLTDRVVPMLPKRL-------- 333

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
            SNG   ++  E   LA+S    + E G + + ++  S+++   R+TY+
Sbjct: 334 -SNGICSLNPNEER-LAMSCEMEIDEQGKIVNHRIFQSVMKSHARMTYK 380

[78][TOP]
>UniRef100_C6DE25 Ribonuclease R n=1 Tax=Pectobacterium carotovorum subsp.
           carotovorum PC1 RepID=C6DE25_PECCP
          Length = 818

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P T+ P+++E    L    P A++ G    R DLR L    +D     + DDA+  
Sbjct: 230 THDIPHTWPPKVEEQVKDLAEEVPEAAKKG----RVDLRKLPLVTIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++P  PL  EA  R  ++Y P++ + MLP  L        
Sbjct: 286 EKKRGGGWRLWVAIADVSYYVRPNTPLDHEARARGTSVYFPSQVVPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+  G L   +   +++    RLTY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTVSAQGKLSSYKFYEAVMSSHARLTY 383

[79][TOP]
>UniRef100_A5IXZ7 Ribonuclease R (VacB-like (Shigella flexneri)ribonuclease II) n=1
           Tax=Mycoplasma agalactiae PG2 RepID=A5IXZ7_MYCAP
          Length = 729

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 49/135 (36%), Positives = 76/135 (56%), Gaps = 3/135 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSW---EADTGRLWVHIADVSAWLKPGEPLTTEALRR 292
           RTDLR+     +D +ST + DDA+S    + +T  L VHIADV+ ++K   PL  EAL+R
Sbjct: 249 RTDLRNDLVVTIDGSSTKDFDDAISVVKIDENTYELGVHIADVAYYVKENTPLDDEALKR 308

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             ++YL  E + MLP +L         SNG   ++  E   L +S    + + G   + +
Sbjct: 309 GTSIYLLNEVVPMLPFKL---------SNGICSLNPNEER-LTISCITKINKLGQSIETK 358

Query: 473 VMPSLIRRPWRLTYE 517
           ++PS+I+  +RLTYE
Sbjct: 359 IVPSVIKSKYRLTYE 373

[80][TOP]
>UniRef100_Q9LZA0 Ribonuclease II-like protein n=1 Tax=Arabidopsis thaliana
           RepID=Q9LZA0_ARATH
          Length = 782

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMS-WEAD 208
           P   S  + EAA  LLS    +S++  +  R DL HL  YA+D     E+DDA+S     
Sbjct: 373 PTHHSEAITEAAEALLSE---SSDID-AVRRIDLTHLKVYAIDVDEADELDDALSATRLQ 428

Query: 209 TGRL--WVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSL 367
            GR+  W+H+AD + ++ PG  +  EA RR  +++LPT T  M P +LA +G+SL
Sbjct: 429 DGRIKIWIHVADPARYVTPGSKVDREARRRGTSVFLPTATYPMFPEKLAMEGMSL 483

[81][TOP]
>UniRef100_C1EB65 Ribonuclease n=1 Tax=Micromonas sp. RCC299 RepID=C1EB65_9CHLO
          Length = 851

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 51/133 (38%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
 Frame = +2

Query: 17  ASHFYPPTFSPELQEAANGLLSAGPLASEVGPSA---CRTDLRHLDSYAVDSASTFEVDD 187
           A H  P  F       ++ L  A  LA+E  P A    R DL  L  YA+D   T EVDD
Sbjct: 382 ARHDVPTAF------LSDALEHAARLAAEAPPDADGEIRKDLTRLRCYAIDGEGTVEVDD 435

Query: 188 AMSWEADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDG 358
           A+S EA  G   R+WVH+AD + W+  G PL  EA  R  + Y P   + M PL +A   
Sbjct: 436 AVSAEALPGGKIRVWVHVADATRWVGLGTPLEAEAESRGASGYHPRGVLPMFPLPVAAGL 495

Query: 359 LSLDASNGHAHVS 397
           +SL        VS
Sbjct: 496 MSLTPGEPKCAVS 508

[82][TOP]
>UniRef100_Q74D34 Ribonuclease R, putative n=1 Tax=Geobacter sulfurreducens
           RepID=Q74D34_GEOSL
          Length = 763

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 51/139 (36%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
 Frame = +2

Query: 107 GPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADTG---RLWVHIADVSAWLKPGEPLTT 277
           G  A R DLR   +  +D  +  + DDA+S + + G   RLWV IADVS ++KPG  L  
Sbjct: 238 GDVAKRVDLRERLTVTIDGETARDFDDAVSVQREKGGDIRLWVSIADVSHYVKPGSALDR 297

Query: 278 EALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGS 457
           EA  R  ++Y P   I MLP EL+    SL+         + E   L     FT    G+
Sbjct: 298 EAYLRGTSVYFPDRCIPMLPEELSNGICSLN--------PQVERLTLTAEMLFT--RSGA 347

Query: 458 LGDPQVMPSLIRRPWRLTY 514
           +      PS+IR   RLTY
Sbjct: 348 IKSSSFYPSVIRSAARLTY 366

[83][TOP]
>UniRef100_A6TH95 RNase R n=1 Tax=Klebsiella pneumoniae subsp. pneumoniae MGH 78578
           RepID=A6TH95_KLEP7
          Length = 810

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  + P +++  +GL    P  ++VG    R DLR L    +D     + DDA+  
Sbjct: 230 THEIPYVWPPAVEKQVSGLKEQVPEEAKVG----RVDLRSLPLVTIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++PG PL  EA  R  ++Y P++ + MLP  L        
Sbjct: 286 EKKRGGGWRLWVAIADVSYYVRPGTPLDAEARSRGTSVYFPSQVVPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    T++  G L   +   +++    RLTY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTISSKGRLTGYKFYEAVMSSHARLTY 383

[84][TOP]
>UniRef100_A2C9R3 Probable ribonuclease II n=1 Tax=Prochlorococcus marinus str. MIT
           9303 RepID=A2C9R3_PROM3
          Length = 683

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 55/162 (33%), Positives = 79/162 (48%), Gaps = 2/162 (1%)
 Frame = +2

Query: 38  TFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEA--DT 211
           +F   +Q  A+ LL+     S     + R DL  L +Y +D   T E+DDA+S ++    
Sbjct: 259 SFEGSVQAQADQLLNKFEQLSFASDDS-RLDLSDLRTYTLDDHQTQEIDDAISLQSVDQD 317

Query: 212 GRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAH 391
             +W+HIAD +  +    PL  EA  R+ +LYL      MLPL +A + LSL A    A 
Sbjct: 318 SWVWIHIADPARLIPVDSPLDLEARARATSLYLADGLRPMLPLSVAAEVLSLRAGRRCA- 376

Query: 392 VSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                    ALS    + E G + D +V  + IR  +RLTYE
Sbjct: 377 ---------ALSVAVVLDESGCIADTRVCRTWIRPCYRLTYE 409

[85][TOP]
>UniRef100_C8P6W3 Ribonuclease R n=1 Tax=Lactobacillus antri DSM 16041
           RepID=C8P6W3_9LACO
          Length = 786

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 3/169 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAM-S 196
           +H  P  F  E  + AN +    PL         R D+ +     +D+  + ++DDA+ +
Sbjct: 227 AHDVPHEFPKEAMDQANQI----PLHVLPEEKKGRKDITNQPLVTIDAIESKDLDDAVVA 282

Query: 197 WEADTGR--LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           W+ D G   L VHIADVS +++PG PL  EA +R  ++YL    + MLP  L        
Sbjct: 283 WKMDNGHYHLGVHIADVSHYVQPGTPLDKEAFKRGTSVYLTDRVVPMLPKRL-------- 334

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
            SNG   ++  E   LA+S    + E G +   ++ PS+++   R+TY+
Sbjct: 335 -SNGICSLNPGEER-LAMSCEMEIDEQGRVVKHRIFPSVMKSHARMTYK 381

[86][TOP]
>UniRef100_C6PDU8 Ribonuclease R n=1 Tax=Thermoanaerobacterium thermosaccharolyticum
           DSM 571 RepID=C6PDU8_CLOTS
          Length = 719

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 49/134 (36%), Positives = 73/134 (54%), Gaps = 3/134 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEA-DTGR--LWVHIADVSAWLKPGEPLTTEALRR 292
           RTDLRHL+   +D     ++DDA++ E  D+G   L+V IADVS ++K G  L  EAL R
Sbjct: 244 RTDLRHLNIVTIDGEDAKDLDDAVAVEKLDSGDYILYVSIADVSHYVKEGSELDKEALNR 303

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
            C++Y     I MLP  L         SNG   ++  E+  L L+    + ++G++ D  
Sbjct: 304 GCSVYFIDRVIPMLPHRL---------SNGICSLNPSEDR-LTLTVKMKIDKNGNVVDHD 353

Query: 473 VMPSLIRRPWRLTY 514
           +  S+IR   R+TY
Sbjct: 354 IFESVIRSKERMTY 367

[87][TOP]
>UniRef100_Q9PK00 Ribonuclease R n=1 Tax=Chlamydia muridarum RepID=RNR_CHLMU
          Length = 692

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 49/135 (36%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGR---LWVHIADVSAWLKPGEPLTTEALRR 292
           R DLR L  + +DSAS  + DDA+S   D      L VHIADVS ++ P   L  EA +R
Sbjct: 204 RKDLRDLLCFTIDSASAKDFDDAVSLTYDHEGNYILGVHIADVSHYVTPNSALDQEAAKR 263

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             ++Y P + I MLP  L+ +  SL  +             LA+S   T +++G L D +
Sbjct: 264 CNSIYFPGKVIPMLPSALSDNLCSLKPNVDR----------LAVSVFMTFSKEGFLSDYR 313

Query: 473 VMPSLIRRPWRLTYE 517
           ++ S+IR  +R+TY+
Sbjct: 314 ILRSVIRSKYRMTYD 328

[88][TOP]
>UniRef100_Q39VV4 3'-5' exoribonuclease, VacB and RNase II:Ribonuclease R n=1
           Tax=Geobacter metallireducens GS-15 RepID=Q39VV4_GEOMG
          Length = 759

 Score = 72.0 bits (175), Expect = 2e-11
 Identities = 55/169 (32%), Positives = 78/169 (46%), Gaps = 3/169 (1%)
 Frame = +2

Query: 17  ASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMS 196
           A H  P  F  E+ + A  +    P A        RTDLR + +  +D  +  + DDA++
Sbjct: 212 AKHGLPFEFPAEVLDEARAV----PQAIGEKDLQGRTDLREIVTVTIDGETARDFDDAVA 267

Query: 197 WEADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSL 367
              + G   RLWV IADVS ++KP  PL  EA  R  ++Y P   I MLP EL+    SL
Sbjct: 268 VRKERGGNIRLWVSIADVSHYVKPDAPLDREAYLRGTSVYFPDRCIPMLPEELSNGICSL 327

Query: 368 DASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
           +           E   +     FT    G++ +    PS+I+   RLTY
Sbjct: 328 N--------PRVERLTMTAEMLFT--RSGTMKEATFYPSVIKSDARLTY 366

[89][TOP]
>UniRef100_B9M5H5 Ribonuclease R n=1 Tax=Geobacter sp. FRC-32 RepID=B9M5H5_GEOSF
          Length = 758

 Score = 72.0 bits (175), Expect = 2e-11
 Identities = 55/167 (32%), Positives = 80/167 (47%), Gaps = 3/167 (1%)
 Frame = +2

Query: 23  HFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWE 202
           H  P  F P + +AA  +    P   +      RTDLR   +  +D  +  + DDA+S +
Sbjct: 214 HELPDVFPPSVLKAARAV----PETIQDSELEGRTDLRGQLTVTIDGETAKDFDDAVSVK 269

Query: 203 ADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDA 373
            +     RLWV IADVS ++KPG PL  EA  R  ++Y P   I MLP EL         
Sbjct: 270 KEGKGAIRLWVSIADVSHYVKPGSPLDKEAYLRGTSVYFPDRCIPMLPEEL--------- 320

Query: 374 SNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
           SNG   ++ + +  L ++        G++ +    PS+IR   RLTY
Sbjct: 321 SNGICSLNPQVDR-LTMTAEMLFDGSGTILEAAFYPSVIRSVARLTY 366

[90][TOP]
>UniRef100_C2ETG9 Exoribonuclease R n=1 Tax=Lactobacillus vaginalis ATCC 49540
           RepID=C2ETG9_9LACO
          Length = 801

 Score = 72.0 bits (175), Expect = 2e-11
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 3/169 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAM-S 196
           +H  P  F  E+ + AN +    PL         R D+       +D+  + ++DDA+ +
Sbjct: 226 AHDVPHEFPQEVMDEANKI----PLKVLPEEKKGRVDITDQPLVTIDAIESKDLDDAVVA 281

Query: 197 WEADTGR--LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           W+ D G   L VHIADVS ++KPG  L  EA +R  ++YL    + MLP  L        
Sbjct: 282 WKMDNGHYHLGVHIADVSHYVKPGSALDKEAFKRGTSVYLTDRVVPMLPKRL-------- 333

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
            SNG   ++  E   L++S    + E G +   ++ PS++R   R+TY+
Sbjct: 334 -SNGICSLNPGEER-LSMSCEMEIDEQGRIIKHRIFPSVMRSHARMTYK 380

[91][TOP]
>UniRef100_Q7V7K3 Probable ribonuclease II n=1 Tax=Prochlorococcus marinus str. MIT
           9313 RepID=Q7V7K3_PROMM
          Length = 688

 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 56/162 (34%), Positives = 78/162 (48%), Gaps = 2/162 (1%)
 Frame = +2

Query: 38  TFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEA--DT 211
           +F   +Q  A+ LL+     S  G    R DL  L +Y +D   T E+DDA+S +     
Sbjct: 264 SFEGSVQAQADQLLNKFEQLS-FGGDDNRLDLSDLRTYTLDDHQTQEIDDAISLQCVDQD 322

Query: 212 GRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAH 391
             +W+HIAD +  +    PL  EA  R+ +LYL     TMLPL +A + LSL A    A 
Sbjct: 323 NWIWIHIADPARLIPVDSPLDLEARARATSLYLADGLRTMLPLSVAVEVLSLRAGRRCA- 381

Query: 392 VSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                    ALS    + E G +   +V  + IR  +RLTYE
Sbjct: 382 ---------ALSVAVVLDESGCIAGTRVCRTWIRPCYRLTYE 414

[92][TOP]
>UniRef100_Q6D126 Ribonuclease R n=1 Tax=Pectobacterium atrosepticum
           RepID=Q6D126_ERWCT
          Length = 818

 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P T+ P++++    L    P A++ G    R DLR L    +D     + DDA+  
Sbjct: 230 THDIPHTWPPKVEDQVKDLSEEVPEAAKKG----RVDLRKLPLVTIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++P  PL  EA  R  ++Y P++ + MLP  L        
Sbjct: 286 EPKRGGGWRLWVAIADVSYYVRPNTPLDHEARARGTSVYFPSQVVPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+  G L   +   +++    RLTY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTVSTQGKLSSYKFYEAVMSSHARLTY 383

[93][TOP]
>UniRef100_B8CYF3 Ribonuclease R n=1 Tax=Halothermothrix orenii H 168
           RepID=B8CYF3_HALOH
          Length = 706

 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 54/165 (32%), Positives = 80/165 (48%), Gaps = 3/165 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEA-- 205
           P  F  E+ E A  +    PL    G    R DLR +    +D A   ++DDA+S E   
Sbjct: 218 PQEFDYEVLEEAKSI----PLEISKGDLKGRRDLRAMPMVTIDGADAKDLDDAVSIEEVD 273

Query: 206 -DTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
            +  RL VHIADVS ++K    L  EAL+R  ++YL    I MLP  L         SNG
Sbjct: 274 DNQVRLGVHIADVSHYVKEDSALDREALKRGTSIYLVDRVIPMLPERL---------SNG 324

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
              ++  ++ +    F     E   L + +++PS+I+  +RLTY+
Sbjct: 325 ICSLNPNQDRLTMSVFITYQLEPFKLMEYEIVPSVIKTNYRLTYD 369

[94][TOP]
>UniRef100_A2C262 Probable ribonuclease II n=1 Tax=Prochlorococcus marinus str.
           NATL1A RepID=A2C262_PROM1
          Length = 424

 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 2/131 (1%)
 Frame = +2

Query: 128 DLRHLDSYAVDSASTFEVDDAMSWEADTG--RLWVHIADVSAWLKPGEPLTTEALRRSCT 301
           DL HL +Y +D + T E+DDA+S E  +G  +LW+HIA  +++++    +  +A +   T
Sbjct: 29  DLSHLKTYTIDDSKTVEIDDAISLEQVSGQNKLWIHIASPASYIEYQSGIDEKARKLVST 88

Query: 302 LYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMP 481
           +YL T T  MLP  L  +  SL         S++E    +LS G  + +DG++   +++ 
Sbjct: 89  VYLSTNTYYMLPEALINNVFSL---------SDKEKRE-SLSLGVILNDDGTISSTEIVQ 138

Query: 482 SLIRRPWRLTY 514
           SLI+  +RL +
Sbjct: 139 SLIQVDYRLDF 149

[95][TOP]
>UniRef100_B7A7Y9 Ribonuclease II n=1 Tax=Thermus aquaticus Y51MC23
           RepID=B7A7Y9_THEAQ
          Length = 598

 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 58/160 (36%), Positives = 77/160 (48%), Gaps = 22/160 (13%)
 Frame = +2

Query: 47  PELQEAANGLL-------SAGPLASEVG-------------PSACRTDLRHLDSYAVDSA 166
           PE  EAA+GLL          P    +G             P   R DL HL ++A+D  
Sbjct: 178 PETPEAAHGLLLRLGLWRRENPHPRRLGLPLAPPDLPVPPLPEEERVDLTHLPAFAIDDE 237

Query: 167 STFEVDDAMSWEA--DTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPL 340
            + + DDA+  E   +  RL+VH+ADV+A + PG PL  EALRR   LYLP   + MLPL
Sbjct: 238 GSQDPDDALYAERVEEGFRLFVHVADVAALVGPGSPLDGEALRRGANLYLPEGAVPMLPL 297

Query: 341 ELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSL 460
            +  + L L    G   VS       AL+F   V+ +G L
Sbjct: 298 AVT-EALGL----GLKEVSP------ALTFELLVSPEGEL 326

[96][TOP]
>UniRef100_B1X3I1 Probable ribonuclease II n=1 Tax=Paulinella chromatophora
           RepID=B1X3I1_PAUCH
          Length = 476

 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 58/168 (34%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
 Frame = +2

Query: 41  FSPELQEAANGLLSAGPLASEVGPS-ACRTDLRHLDSYAVDSASTFEVDDAMSWEADTGR 217
           F+ +    AN L +   LA+E  PS   R DL  L  + +D   T E+DDA+S+E D   
Sbjct: 51  FNQKQMAEANRLCA---LANEAQPSDEQRLDLTGLRCFTIDDPGTQELDDALSYEQDQDG 107

Query: 218 ---LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHA 388
              +W+HIAD    + PG  L  EA +R+ +LYL +  + M P+ELA   LSL      A
Sbjct: 108 NEWIWIHIADPDRLVFPGSDLDLEAKQRATSLYLASGGLPMFPMELAAGSLSLKQGQRCA 167

Query: 389 HVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPW-----RLTYE 517
            VS    A+L  + G            +V+  +++R W     RLTYE
Sbjct: 168 AVS---TAILLDNCG------------EVVKIILQRSWIYPTYRLTYE 200

[97][TOP]
>UniRef100_Q18FH8 Ribonuclease R homolog n=2 Tax=Halobacteriaceae RepID=Q18FH8_HALWD
          Length = 442

 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 52/134 (38%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEA--DTGRLWVHIADVSAWLKPGEPLTTEALRRS 295
           RTDLR L ++  D     + DDA+S     +T  LWVHIADVS ++ P   + TEA+ R 
Sbjct: 74  RTDLRELTTWTTDPVDAQDFDDALSIRENDETYTLWVHIADVSHYVHPDSEMWTEAVERG 133

Query: 296 CTLYLPTETITMLPLELARDGLSLDASNGH-AHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
            T+YLP  TI MLP  LA    SL       AH  E E +   LSF           +  
Sbjct: 134 NTVYLPAYTIHMLPPVLAETVCSLVPEKDRLAHTVEMEISKETLSF----------EELD 183

Query: 473 VMPSLIRRPWRLTY 514
           +  S+I    RLTY
Sbjct: 184 IYKSVIHSDARLTY 197

[98][TOP]
>UniRef100_Q1MTN7 Exoribonuclease II, mitochondrial n=1 Tax=Schizosaccharomyces pombe
           RepID=RPM1_SCHPO
          Length = 957

 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWE---ADTGRLWVHIADVSAWLKPGEPLTTEALRR 292
           R DLRHL ++A DS+ST E+DDA+S E        L +H+A+ ++ +    PL T A R 
Sbjct: 503 RVDLRHLKAFAFDSSSTKEIDDAISVEELGMSNSWLHIHVANPTSTVDIRSPLGTFAERN 562

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             T+Y P + + MLPL + +   SLD+S+          A  AL+F   ++++G + D +
Sbjct: 563 FQTIYHPNKIVYMLPLNITQKYWSLDSSS---------TAQRALTFSAKISKNGDILDYK 613

Query: 473 VMPSLI 490
           V PS I
Sbjct: 614 VRPSFI 619

[99][TOP]
>UniRef100_UPI0001B59A2B exoribonuclease II n=1 Tax=Chlamydia trachomatis D(s)2923
           RepID=UPI0001B59A2B
          Length = 694

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGR---LWVHIADVSAWLKPGEPLTTEALRR 292
           R DLR L  + +DS+S  + DDA+S   D      L VHIADVS ++ P   L  EA +R
Sbjct: 204 RKDLRDLLCFTIDSSSAKDFDDAVSLTYDHEGNYILGVHIADVSHYVTPNSALDREAAKR 263

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             ++Y P + I MLP  L+ +  SL  +             LA+S   T +++G L D +
Sbjct: 264 CNSIYFPGKVIPMLPSALSDNLCSLKPNVDR----------LAVSVFMTFSKEGFLSDYR 313

Query: 473 VMPSLIRRPWRLTYE 517
           ++ S+IR  +R+TY+
Sbjct: 314 ILRSVIRSKYRMTYD 328

[100][TOP]
>UniRef100_UPI0001B46FF8 exoribonuclease II n=1 Tax=Chlamydia trachomatis 70s
           RepID=UPI0001B46FF8
          Length = 694

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGR---LWVHIADVSAWLKPGEPLTTEALRR 292
           R DLR L  + +DS+S  + DDA+S   D      L VHIADVS ++ P   L  EA +R
Sbjct: 204 RKDLRDLLCFTIDSSSAKDFDDAVSLTYDHEGNYILGVHIADVSHYVTPNSALDREAAKR 263

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             ++Y P + I MLP  L+ +  SL  +             LA+S   T +++G L D +
Sbjct: 264 CNSIYFPGKVIPMLPSALSDNLCSLKPNVDR----------LAVSVFMTFSKEGFLSDYR 313

Query: 473 VMPSLIRRPWRLTYE 517
           ++ S+IR  +R+TY+
Sbjct: 314 ILRSVIRSKYRMTYD 328

[101][TOP]
>UniRef100_UPI0001B46DE0 exoribonuclease II n=1 Tax=Chlamydia trachomatis 6276
           RepID=UPI0001B46DE0
          Length = 694

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGR---LWVHIADVSAWLKPGEPLTTEALRR 292
           R DLR L  + +DS+S  + DDA+S   D      L VHIADVS ++ P   L  EA +R
Sbjct: 204 RKDLRDLLCFTIDSSSAKDFDDAVSLTYDHEGNYILGVHIADVSHYVTPNSALDREAAKR 263

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             ++Y P + I MLP  L+ +  SL  +             LA+S   T +++G L D +
Sbjct: 264 CNSIYFPGKVIPMLPSALSDNLCSLKPNVDR----------LAVSVFMTFSKEGFLSDYR 313

Query: 473 VMPSLIRRPWRLTYE 517
           ++ S+IR  +R+TY+
Sbjct: 314 ILRSVIRSKYRMTYD 328

[102][TOP]
>UniRef100_Q6AMK8 Related to ribonuclease R n=1 Tax=Desulfotalea psychrophila
           RepID=Q6AMK8_DESPS
          Length = 590

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADT 211
           P  FS   ++ A  +L       ++     R D  HL    +D  +T + DDA++ E D 
Sbjct: 175 PVAFSLAARQQAEQILQTD--MDKLFDDPARIDYTHLKPITIDGPTTQDFDDALTIEKDG 232

Query: 212 GR--LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGH 385
               + VHI+DV+ +++PG+PL  EA++R  ++Y P   I MLP  L++   SL      
Sbjct: 233 ENYLVGVHISDVAHYVRPGDPLFQEAMQRGTSIYFPEGQIPMLPRHLSQGICSLIQGEIR 292

Query: 386 AHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
           A          ALSF   ++ +  +   ++ PS+I+   RLTYE
Sbjct: 293 A----------ALSFMILLSPEAEVLRVRIRPSIIKVARRLTYE 326

[103][TOP]
>UniRef100_Q46KZ5 Exoribonuclease R/ribonuclease II n=1 Tax=Prochlorococcus marinus
           str. NATL2A RepID=Q46KZ5_PROMT
          Length = 424

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 43/131 (32%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
 Frame = +2

Query: 128 DLRHLDSYAVDSASTFEVDDAMSWEADTG--RLWVHIADVSAWLKPGEPLTTEALRRSCT 301
           DL HL +Y +D + T E+DDA+S E  +G  +LW+HIA  +++++    +  +A +   T
Sbjct: 29  DLTHLKTYTIDDSKTVEIDDAISLEQVSGQNKLWIHIASPASYIEYQSGIDEKARKLVST 88

Query: 302 LYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMP 481
           +YL   T  MLP  L  +  SL         S++E    +LS G  + +DGS+   +++ 
Sbjct: 89  VYLSNNTYYMLPKALINNVFSL---------SDKEKRE-SLSLGVILNDDGSISSTEIVQ 138

Query: 482 SLIRRPWRLTY 514
           SLI+  +RL +
Sbjct: 139 SLIQVDYRLDF 149

[104][TOP]
>UniRef100_Q3KLV6 Exoribonuclease II n=1 Tax=Chlamydia trachomatis A/HAR-13
           RepID=Q3KLV6_CHLTA
          Length = 694

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGR---LWVHIADVSAWLKPGEPLTTEALRR 292
           R DLR L  + +DS+S  + DDA+S   D      L VHIADVS ++ P   L  EA +R
Sbjct: 204 RKDLRDLLCFTIDSSSAKDFDDAVSLTYDHEGNYILGVHIADVSHYVTPNSALDREAAKR 263

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             ++Y P + I MLP  L+ +  SL  +             LA+S   T +++G L D +
Sbjct: 264 CNSIYFPGKVIPMLPSALSDNLCSLKPNVDR----------LAVSVFMTFSKEGFLSDYR 313

Query: 473 VMPSLIRRPWRLTYE 517
           ++ S+IR  +R+TY+
Sbjct: 314 ILRSVIRSKYRMTYD 328

[105][TOP]
>UniRef100_Q1AVL2 RNAse R n=1 Tax=Rubrobacter xylanophilus DSM 9941
           RepID=Q1AVL2_RUBXD
          Length = 535

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 50/134 (37%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTG--RLWVHIADVSAWLKPGEPLTTEALRRS 295
           R DLR L +  +D     + DDA+S   + G  RLWVHIADV+ ++ PG  L  +AL R 
Sbjct: 102 RRDLRRLPTVTIDGEDAKDFDDAISILREDGGYRLWVHIADVTHYVDPGGALDRQALYRG 161

Query: 296 CTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQV 475
            ++YLP     MLP  L+ D  SL      A V+ E           +V+ +G +   +V
Sbjct: 162 NSVYLPGTVAPMLPARLSADVCSLRPHADRAAVTVE----------ISVSGEGEVRGWKV 211

Query: 476 MPSLIRRPWRLTYE 517
             SLI    RLTYE
Sbjct: 212 YRSLICSDARLTYE 225

[106][TOP]
>UniRef100_B0B7W7 Exoribonuclease II n=2 Tax=Chlamydia trachomatis RepID=B0B7W7_CHLT2
          Length = 694

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGR---LWVHIADVSAWLKPGEPLTTEALRR 292
           R DLR L  + +DS+S  + DDA+S   D      L VHIADVS ++ P   L  EA +R
Sbjct: 204 RKDLRDLLCFTIDSSSAKDFDDAVSLTYDHEGNYILGVHIADVSHYVTPNSALDREAAKR 263

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             ++Y P + I MLP  L+ +  SL  +             LA+S   T +++G L D +
Sbjct: 264 CNSIYFPGKVIPMLPSALSDNLCSLKPNVDR----------LAVSVFMTFSKEGFLSDYR 313

Query: 473 VMPSLIRRPWRLTYE 517
           ++ S+IR  +R+TY+
Sbjct: 314 ILRSVIRSKYRMTYD 328

[107][TOP]
>UniRef100_C4X1B1 Ribonuclease R n=2 Tax=Klebsiella pneumoniae RepID=C4X1B1_KLEPN
          Length = 810

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  + P +++  +GL    P  ++ G    R DLR L    +D     + DDA+  
Sbjct: 230 THEIPYVWPPAVEKQVSGLKEQVPEEAKAG----RVDLRSLPLVTIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++PG PL  EA  R  ++Y P++ + MLP  L        
Sbjct: 286 EKKRGGGWRLWVAIADVSYYVRPGTPLDAEARSRGTSVYFPSQVVPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    T++  G L   +   +++    RLTY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTISSKGRLTGYKFYEAVMSSHARLTY 383

[108][TOP]
>UniRef100_C4PMQ4 Exoribonuclease II n=2 Tax=Chlamydia trachomatis RepID=C4PMQ4_CHLTZ
          Length = 694

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGR---LWVHIADVSAWLKPGEPLTTEALRR 292
           R DLR L  + +DS+S  + DDA+S   D      L VHIADVS ++ P   L  EA +R
Sbjct: 204 RKDLRDLLCFTIDSSSAKDFDDAVSLTYDHEGNYILGVHIADVSHYVTPNSALDREAAKR 263

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             ++Y P + I MLP  L+ +  SL  +             LA+S   T +++G L D +
Sbjct: 264 CNSIYFPGKVIPMLPSALSDNLCSLKPNVDR----------LAVSVFMTFSKEGFLSDYR 313

Query: 473 VMPSLIRRPWRLTYE 517
           ++ S+IR  +R+TY+
Sbjct: 314 ILRSVIRSKYRMTYD 328

[109][TOP]
>UniRef100_A8SB02 Putative uncharacterized protein n=1 Tax=Faecalibacterium
           prausnitzii M21/2 RepID=A8SB02_9FIRM
          Length = 707

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 53/139 (38%), Positives = 77/139 (55%), Gaps = 7/139 (5%)
 Frame = +2

Query: 98  SEVGPSAC--RTDLRHLDSYAVDSASTFEVDDAMSWEA--DTG-RLWVHIADVSAWLKPG 262
           +EV  + C  R DLR L  + +DSA T ++DDA+S     D G  L VHIADVS ++KPG
Sbjct: 232 AEVSAADCEGRMDLRALPIFTIDSAETKDIDDAISLTKTPDGGFELGVHIADVSNYVKPG 291

Query: 263 EPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFG--F 436
             L  EA  R+ ++Y   + + MLP +L         SNG   ++E    VL L+F    
Sbjct: 292 SELDNEAFNRATSVYYADQVVPMLPKQL---------SNGICSLNE---GVLRLAFSCLM 339

Query: 437 TVAEDGSLGDPQVMPSLIR 493
            + +DG+L D + + S+IR
Sbjct: 340 RLDKDGNLTDYRFVKSVIR 358

[110][TOP]
>UniRef100_B9LSB8 Ribonuclease II n=1 Tax=Halorubrum lacusprofundi ATCC 49239
           RepID=B9LSB8_HALLT
          Length = 433

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 52/135 (38%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTG--RLWVHIADVSAWLKPGEPLTTEALRRS 295
           R DLR L ++  D     + DDA+S E + G  RLWVHIADV+ ++ P   +  EA++R+
Sbjct: 70  RKDLRDLTTWTTDPIDAQDFDDAISIEREEGAYRLWVHIADVTHYVTPDTAMWEEAVKRA 129

Query: 296 CTLYLPTETITMLPLELARDGLSLDASNGH-AHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
            T+YLP  TI MLP  LA    SL  +    AH  E E     LSF           D  
Sbjct: 130 NTVYLPDYTIHMLPPVLAETVCSLVPNEDRLAHTVEMEIDDETLSF----------EDID 179

Query: 473 VMPSLIRRPWRLTYE 517
           +  S+I    RLTY+
Sbjct: 180 IYKSVINSDERLTYK 194

[111][TOP]
>UniRef100_O84402 Ribonuclease R n=1 Tax=Chlamydia trachomatis RepID=RNR_CHLTR
          Length = 694

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGR---LWVHIADVSAWLKPGEPLTTEALRR 292
           R DLR L  + +DS+S  + DDA+S   D      L VHIADVS ++ P   L  EA +R
Sbjct: 204 RKDLRDLLCFTIDSSSAKDFDDAVSLTYDHEGNYILGVHIADVSHYVTPNSALDREAAKR 263

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             ++Y P + I MLP  L+ +  SL  +             LA+S   T +++G L D +
Sbjct: 264 CNSIYFPGKVIPMLPSALSDNLCSLKPNVDR----------LAVSVFMTFSKEGFLSDYR 313

Query: 473 VMPSLIRRPWRLTYE 517
           ++ S+IR  +R+TY+
Sbjct: 314 ILRSVIRSKYRMTYD 328

[112][TOP]
>UniRef100_B2A6Y6 Ribonuclease R n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF
           RepID=B2A6Y6_NATTJ
          Length = 709

 Score = 70.5 bits (171), Expect = 6e-11
 Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSAC--RTDLRHLDSYAVDSASTFEVDDAM 193
           S  YPP    +L+E  N          E+ P     R  ++ L +  +D +   ++DDA+
Sbjct: 221 SEDYPPKVKEQLEEVPN----------EISPKDYEGRELIQGLPTVTIDGSDAKDLDDAV 270

Query: 194 SWEA-DTGR--LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLS 364
           S E  D G   L VHIADVS +++ G PL  EA +R  ++YL    + MLP +L+ +  S
Sbjct: 271 SLEKLDNGNMELGVHIADVSYYVREGTPLDKEARQRGTSVYLVDRVLPMLPPKLSNNICS 330

Query: 365 LDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
           L+               L +S    + E+G + + ++ PS+I+  +RLTYE
Sbjct: 331 LNPGVER----------LTMSAFVELTEEGDIANYRLTPSVIKSNYRLTYE 371

[113][TOP]
>UniRef100_A1AN74 Ribonuclease R n=1 Tax=Pelobacter propionicus DSM 2379
           RepID=A1AN74_PELPD
          Length = 777

 Score = 70.5 bits (171), Expect = 6e-11
 Identities = 51/163 (31%), Positives = 72/163 (44%), Gaps = 2/163 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW--EA 205
           P  F+P+    A  +    P     G    R DLR L +  +D  +  + DDA+S   E 
Sbjct: 217 PHVFAPDTLAEAEAIPETVPAQELAG----RVDLRPLATVTIDGETARDFDDAVSLRREG 272

Query: 206 DTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGH 385
           D  RLWV IADVS +++P  PL  +A  R  ++Y P   I MLP  L+    SL+     
Sbjct: 273 DNFRLWVSIADVSHYVRPDSPLDRDAYLRGTSVYFPDRCIPMLPERLSNGICSLNPGVER 332

Query: 386 AHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
                     L ++       DGS+ +    P +I    RLTY
Sbjct: 333 ----------LTMTAEMLFDRDGSMLESSFYPGIIASAARLTY 365

[114][TOP]
>UniRef100_C7H5E0 Ribonuclease R n=1 Tax=Faecalibacterium prausnitzii A2-165
           RepID=C7H5E0_9FIRM
          Length = 705

 Score = 70.5 bits (171), Expect = 6e-11
 Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 3/126 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTG---RLWVHIADVSAWLKPGEPLTTEALRR 292
           R DLR L  + +DSA T ++DDA+S     G    L VHIADVS ++KPG  L  EA  R
Sbjct: 242 RMDLRALPIFTIDSAETKDIDDAVSLTRLPGGGYELGVHIADVSHYVKPGSELNEEAFNR 301

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
           + ++Y   + + MLP  L         SNG   ++E+E   LA S    + +DG+L D +
Sbjct: 302 ATSVYYADQVVPMLPKSL---------SNGICSLNEKE-LRLAFSCLMRLDQDGNLTDYK 351

Query: 473 VMPSLI 490
            + S+I
Sbjct: 352 FVKSII 357

[115][TOP]
>UniRef100_B7RW80 Ribonuclease R n=1 Tax=marine gamma proteobacterium HTCC2148
           RepID=B7RW80_9GAMM
          Length = 819

 Score = 70.5 bits (171), Expect = 6e-11
 Identities = 52/152 (34%), Positives = 72/152 (47%), Gaps = 5/152 (3%)
 Frame = +2

Query: 74  LLSAGPLASEVGPS--ACRTDLRHLDSYAVDSASTFEVDDAMSWEADTG---RLWVHIAD 238
           L  AG LA E        R DLRHL    +D     + DDA+  E  +G   RLWV IAD
Sbjct: 274 LAEAGALAEEPAEQDKLNRMDLRHLAFVTIDGEDARDFDDAVYCETASGGGWRLWVAIAD 333

Query: 239 VSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVL 418
           V  +++PG  L  EA +R+ ++Y P   + MLP  L+    SL  +             L
Sbjct: 334 VCHYVRPGSALDEEASKRATSVYFPERVVPMLPEALSNGLCSLKPAVDR----------L 383

Query: 419 ALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
           A+     +++ G+LG  Q   S+I    RLTY
Sbjct: 384 AMVCEMEISKAGALGKYQFYESVIHSHARLTY 415

[116][TOP]
>UniRef100_C5XPP8 Putative uncharacterized protein Sb03g039500 n=1 Tax=Sorghum
           bicolor RepID=C5XPP8_SORBI
          Length = 782

 Score = 70.5 bits (171), Expect = 6e-11
 Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 3/162 (1%)
 Frame = +2

Query: 41  FSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMS-WEADTGR 217
           ++ E+  AA  LL   P A        R DL  L  YA+D     E+DDA+S      GR
Sbjct: 350 YTDEVLSAAEELLVDSPDAD----MHIRKDLSTLKVYAIDVDEADELDDALSATRLPDGR 405

Query: 218 L--WVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAH 391
           +  W+H+AD +  +KP   +  EA+ R  +++LPT TI M P  LA + +SL        
Sbjct: 406 IKVWIHVADPTCLVKPRSIIDREAMHRGTSIFLPTATIPMFPERLAMNAMSL-------- 457

Query: 392 VSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
             ++     +++    +  DGS+ +  +  S+I+  + LTYE
Sbjct: 458 --QQGKECKSVTVSVILNSDGSIAEYTLENSVIKPTYMLTYE 497

[117][TOP]
>UniRef100_UPI0001A42FBC exoribonuclease R n=1 Tax=Pectobacterium carotovorum subsp.
           brasiliensis PBR1692 RepID=UPI0001A42FBC
          Length = 818

 Score = 70.1 bits (170), Expect = 8e-11
 Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P T+  +++E    L    P A++ G    R DLR L    +D     + DDA+  
Sbjct: 230 THDIPHTWPEKVEEQVKDLSEEVPEAAKKG----RVDLRKLPLVTIDGEDARDFDDAVHC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++P  PL  EA  R  ++Y P++ + MLP  L        
Sbjct: 286 EPKRGGGWRLWVAIADVSYYVRPNTPLDHEARARGTSVYFPSQVVPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+  G L   +   +++    RLTY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTVSAQGKLSSYKFYEAVMSSHARLTY 383

[118][TOP]
>UniRef100_B5Y323 Ribonuclease R n=1 Tax=Klebsiella pneumoniae 342 RepID=B5Y323_KLEP3
          Length = 812

 Score = 70.1 bits (170), Expect = 8e-11
 Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  + P +++  +GL    P  ++ G    R DLR L    +D     + DDA+  
Sbjct: 230 THEIPYVWPPAVEKQVSGLKEQVPEEAKAG----RVDLRSLPLVTIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++PG PL  EA  R  ++Y P++ + MLP  L        
Sbjct: 286 EKKRGGGWRLWVAIADVSYYVRPGTPLDGEARSRGTSVYFPSQVVPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    T++  G L   +   +++    RLTY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTISSKGRLTGFKFYEAVMSSHARLTY 383

[119][TOP]
>UniRef100_Q1NL99 3'-5' exoribonuclease, VacB and RNase II:Ribonuclease R n=1
           Tax=delta proteobacterium MLMS-1 RepID=Q1NL99_9DELT
          Length = 782

 Score = 70.1 bits (170), Expect = 8e-11
 Identities = 56/168 (33%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           SH  P  F+P L      L      + ++ P A R DLR +    +DS S  + DDA++ 
Sbjct: 287 SHQLPHRFAPAL------LAEVEAYSDKIEPQASRLDLREIPHVTIDSESARDYDDAVAV 340

Query: 200 E--ADTG-RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E  A  G RL+V IADVS +++PG  L  EA  R  ++Y P   + MLP  L+ D  SL 
Sbjct: 341 EPLAKGGLRLYVSIADVSHYVQPGSALDDEAYARGTSVYFPGRVVPMLPERLSNDLCSL- 399

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
                  V +++   ++    F     G     +   SLIR   RLTY
Sbjct: 400 -------VPDQDRYTMSAIIDFD--GKGQRKSARFGKSLIRSRHRLTY 438

[120][TOP]
>UniRef100_C2D5G8 Exoribonuclease R n=1 Tax=Lactobacillus brevis subsp. gravesensis
           ATCC 27305 RepID=C2D5G8_LACBR
          Length = 780

 Score = 70.1 bits (170), Expect = 8e-11
 Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 3/173 (1%)
 Frame = +2

Query: 5   LELRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVD 184
           L++  SH  P  F  ++ +AA+ +        + G    R D+   D   +D  S+ ++D
Sbjct: 220 LQIVYSHDIPAEFPEDVLQAADAIPDHVTEEEKAG----REDITDQDLVTIDGESSKDLD 275

Query: 185 DAMS-WEADTGR--LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARD 355
           DA++ W+   G   L VHIADVS ++K G  +  EA RR  ++YL    I MLP  L   
Sbjct: 276 DAVTAWKLPNGNYHLGVHIADVSHYVKAGGLIDKEAYRRGTSVYLTDRVIPMLPRRL--- 332

Query: 356 GLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
                 SNG   ++E E   L +S    + + G++   ++ PSL+R   R+TY
Sbjct: 333 ------SNGICSLNEGE-LRLCMSCEMEIDQSGNVVKHRIHPSLMRSKARMTY 378

[121][TOP]
>UniRef100_C0XMN5 Exoribonuclease R n=1 Tax=Lactobacillus hilgardii ATCC 8290
           RepID=C0XMN5_LACHI
          Length = 780

 Score = 70.1 bits (170), Expect = 8e-11
 Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 3/173 (1%)
 Frame = +2

Query: 5   LELRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVD 184
           L++  SH  P  F  ++ +AA+ +    P        A R D+   D   +D  S+ ++D
Sbjct: 220 LQIVYSHDIPAEFPEDVLQAADAI----PDHITEEEKAGREDITDQDLVTIDGESSKDLD 275

Query: 185 DAMS-WEADTGR--LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARD 355
           DA++ W+   G   L VHIADVS ++K G  +  EA RR  ++YL    I MLP  L   
Sbjct: 276 DAVTAWKLPNGNYHLGVHIADVSHYVKAGGLIDKEAYRRGTSVYLTDRVIPMLPRRL--- 332

Query: 356 GLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
                 SNG   ++E E   L +S    + + G++   ++ PSL+R   R+TY
Sbjct: 333 ------SNGICSLNEGE-LRLCMSCEMEIDQSGNVVKHRIHPSLMRSKARMTY 378

[122][TOP]
>UniRef100_C0WUC0 Exoribonuclease R n=1 Tax=Lactobacillus buchneri ATCC 11577
           RepID=C0WUC0_LACBU
          Length = 780

 Score = 70.1 bits (170), Expect = 8e-11
 Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 3/173 (1%)
 Frame = +2

Query: 5   LELRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVD 184
           L++  SH  P  F  ++ +AA+ +        + G    R D+   D   +D  S+ ++D
Sbjct: 220 LQIVYSHDIPAEFPEDVLQAADAIPDHVTEEEKAG----REDITDQDLVTIDGESSKDLD 275

Query: 185 DAMS-WEADTGR--LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARD 355
           DA++ W+   G   L VHIADVS ++K G  +  EA RR  ++YL    I MLP  L   
Sbjct: 276 DAVTAWKLPNGNYHLGVHIADVSHYVKAGGLIDKEAYRRGTSVYLTDRVIPMLPRRL--- 332

Query: 356 GLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
                 SNG   ++E E   L +S    + + G++   ++ PSL+R   R+TY
Sbjct: 333 ------SNGICSLNEGE-LRLCMSCEMEIDQSGNVVKHRIHPSLMRSKARMTY 378

[123][TOP]
>UniRef100_B6WY09 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC
           29098 RepID=B6WY09_9DELT
          Length = 803

 Score = 70.1 bits (170), Expect = 8e-11
 Identities = 61/173 (35%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
 Frame = +2

Query: 11  LRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDA 190
           ++ +H  P  F P +Q  A+ L SA   A   G    R D+R L    +D A   + DDA
Sbjct: 230 VKLNHEVPREFPPRVQAEADALPSAPRHADMAG----REDVRALPLVTIDGADARDFDDA 285

Query: 191 MSWEADTGRLW---VHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGL 361
           +  EA  G  W   V IADVS +++P   L TEAL R  + Y PT    MLP  L  DGL
Sbjct: 286 VQVEARPGGGWLLRVAIADVSHYVRPRSALDTEALARGNSWYFPTSVEPMLPPALC-DGL 344

Query: 362 SLDASNGHAHVSEEENAVLA-LSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                       E+  A+LA + F  T    G  G P+    ++R   RLTY+
Sbjct: 345 C------SLRPDEDRLAMLAEIPFSAT----GQPGKPRFAAVVMRSAARLTYD 387

[124][TOP]
>UniRef100_B5IJX0 Exoribonuclease, VacB/RNB family protein n=1 Tax=Cyanobium sp. PCC
           7001 RepID=B5IJX0_9CHRO
          Length = 654

 Score = 70.1 bits (170), Expect = 8e-11
 Identities = 54/163 (33%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
 Frame = +2

Query: 41  FSPELQEAANGLLSA--GPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADTG 214
           FS +L+  A  L+    GP A +      R DL  L    +D A T ++DDA+  E    
Sbjct: 232 FSADLEAEARRLIDRADGPCAGD----GDRLDLTALHCVTIDDADTRDIDDAIGLERCAD 287

Query: 215 ---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGH 385
              RLW+HIAD    +    PL  EA RR  +LYL + T+ M P  LA   LSL A   +
Sbjct: 288 GLLRLWIHIADPGRLVALDSPLDVEARRRGSSLYLASGTLPMFPEALATGPLSLVAGRRN 347

Query: 386 AHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
           A          A S G  +  +G++   ++  S +R  +RL+Y
Sbjct: 348 A----------AWSLGLELDGEGAITATRLARSWVRPTYRLSY 380

[125][TOP]
>UniRef100_Q824B3 Exoribonuclease, VacB/Rnb family n=1 Tax=Chlamydophila caviae
           RepID=Q824B3_CHLCV
          Length = 678

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGR---LWVHIADVSAWLKPGEPLTTEALRR 292
           R DLR L  + +DS +  + DDA+S   D      L VHIADVS ++ P   L  EA +R
Sbjct: 207 RKDLRDLLCFTIDSITAKDFDDAVSLTYDNNDNYILGVHIADVSHYVTPHSALDQEASKR 266

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             ++Y P + I MLP  L+ +  SL  +             LA+S   T  ++G L D +
Sbjct: 267 CNSIYFPGKVIPMLPSALSDNLCSLKPNVDR----------LAVSVFMTFTKEGHLSDYE 316

Query: 473 VMPSLIRRPWRLTYE 517
           V  S+IR  +R+TY+
Sbjct: 317 VFRSVIRSKYRMTYD 331

[126][TOP]
>UniRef100_B0S925 Exoribonuclease R n=2 Tax=Leptospira biflexa serovar Patoc
           RepID=B0S925_LEPBA
          Length = 730

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSW--EADTGRLWVHIADVSAWLKPGEPLTTEALRRS 295
           RTDLR L +  +D  +  + DDA+S+  E +  R+W+HIADVS +++ G  L  EA  R+
Sbjct: 274 RTDLRDLYAVTIDGITAKDFDDAISFVDEGNRLRIWIHIADVSYYVEKGSALDKEAYERA 333

Query: 296 CTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQV 475
            ++YL    + MLP  L+ D  SL A+             LA +     ++ G + + + 
Sbjct: 334 TSVYLANRVVPMLPPILSEDLCSLVANTNR----------LAFTVEMEASKSGEIYNAKF 383

Query: 476 MPSLIRRPWRLTYE 517
             S+I+   R TYE
Sbjct: 384 YKSIIKVKKRYTYE 397

[127][TOP]
>UniRef100_A8ZTJ4 Exoribonuclease II n=1 Tax=Desulfococcus oleovorans Hxd3
           RepID=A8ZTJ4_DESOH
          Length = 666

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 3/167 (1%)
 Frame = +2

Query: 23  HFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWE 202
           H  P ++  ++ +A+  L++   + S  GP   R DL  L  + +D + T + DDA+S E
Sbjct: 244 HRVPVSWPDDVTKASEKLVATAGIPS-AGPD--RVDLTGLSLFTIDGSQTLDFDDALSLE 300

Query: 203 A-DTG--RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDA 373
             + G  RL +HI+DV  ++K  +PL  EAL+R  ++Y   + I MLP E++    SL A
Sbjct: 301 PMENGACRLGIHISDVGHYIKKEDPLDAEALKRGSSIYTADKKIPMLPAEISEGLCSLVA 360

Query: 374 SNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
                          A+S   T++    + + +V+ S+IR    LTY
Sbjct: 361 GKPRP----------AISMLITLSSSAEVMECRVVASVIRVENHLTY 397

[128][TOP]
>UniRef100_A5G505 Ribonuclease R n=1 Tax=Geobacter uraniireducens Rf4
           RepID=A5G505_GEOUR
          Length = 763

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 48/134 (35%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTG---RLWVHIADVSAWLKPGEPLTTEALRR 292
           RTDLR   +  +D  +  + DDA+S + +     RLWV IADVS ++KPG P+  EA  R
Sbjct: 244 RTDLRGRPTVTIDGETARDFDDAVSVKREGKGNIRLWVSIADVSHYVKPGSPIDREAYLR 303

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             ++Y P   I MLP EL+    SL+ +     V+ E      + FG      G +    
Sbjct: 304 GTSVYFPDRCIPMLPEELSNGICSLNPTVDRLTVTAE------MLFG----PSGEMLQAS 353

Query: 473 VMPSLIRRPWRLTY 514
             PS+I+   RLTY
Sbjct: 354 FYPSVIKSAARLTY 367

[129][TOP]
>UniRef100_C8QL69 Ribonuclease R n=1 Tax=Dickeya dadantii Ech586 RepID=C8QL69_DICDA
          Length = 824

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P ++ P+++E  + L    P +++ G    R DLR L    +D     + DDA+  
Sbjct: 230 THEIPHSWPPKVEEQVSDLAEEVPESAKKG----RVDLRSLPLVTIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++PG  L  EA  R  ++Y P++ + MLP  L        
Sbjct: 286 EKKRGGGWRLWVAIADVSYYVRPGTALDHEARARGTSVYFPSQVVPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+  G L   +   +++    RLTY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTVSTQGKLSGYKFYEAVMSSHARLTY 383

[130][TOP]
>UniRef100_C6NKN4 Ribonuclease R n=1 Tax=Pectobacterium wasabiae WPP163
           RepID=C6NKN4_9ENTR
          Length = 818

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P T+ P+++E    L    P A++ G    R DLR L    +D     + DDA+  
Sbjct: 230 THDIPHTWPPKVEEQVKDLSEEVPEAAKKG----RVDLRKLPLVTIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++P   L  EA  R  ++Y P++ + MLP  L        
Sbjct: 286 EQKRGGGWRLWVAIADVSYYVRPNTALDHEARARGTSVYFPSQVVPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+  G L   +   +++    RLTY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTVSAQGKLSSYKFYEAVMSSHARLTY 383

[131][TOP]
>UniRef100_C1MV31 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1MV31_9CHLO
          Length = 636

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 47/137 (34%), Positives = 68/137 (49%), Gaps = 12/137 (8%)
 Frame = +2

Query: 23  HFYPPTFSPELQEAANGLLSAGPLASEVG-----PSACRTDLR-HLDSYAVDSASTFEVD 184
           H  P  F   + + A+ + +A   A++        +A R DLR   D YA+D   TFEVD
Sbjct: 91  HGIPTAFPARVLDEADAVEAAAIAAADGDVDDDVDAATRKDLRGRFDVYAIDGDDTFEVD 150

Query: 185 DAMSWEA------DTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLEL 346
           D +S EA      D  R+W+H+ADV+  ++ G  L  EA  R  + Y P   ++M P  L
Sbjct: 151 DGVSAEAMGPGSGDAIRVWIHVADVARHVRLGGALEAEARERGASGYAPDRVVSMFPPRL 210

Query: 347 ARDGLSLDASNGHAHVS 397
           A + LSL  +     VS
Sbjct: 211 AAETLSLRLNEPRCAVS 227

[132][TOP]
>UniRef100_Q9Z848 Ribonuclease R n=1 Tax=Chlamydophila pneumoniae RepID=RNR_CHLPN
          Length = 676

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 57/172 (33%), Positives = 86/172 (50%), Gaps = 3/172 (1%)
 Frame = +2

Query: 11  LRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDA 190
           ++A +     F PE+ E A+  L +    ++V  S  R DLR L  + +DS++  + DDA
Sbjct: 174 IQAEYNLAEEFPPEVIEEAS--LFSQKHITQVLHS--RKDLRDLLCFTIDSSTARDFDDA 229

Query: 191 MSWEADTGR---LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGL 361
           +S   D      L VHIADVS ++ P   L  EA +R  + Y P + I MLP  L+ +  
Sbjct: 230 ISLTYDHNNNYILGVHIADVSHYVTPHSHLDKEAAKRCNSTYFPGKVIPMLPSALSDNLC 289

Query: 362 SLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
           SL  +             LA+S   T  + G L D Q+  S+IR  +R+TY+
Sbjct: 290 SLKPNVDR----------LAVSVFMTFTKSGHLSDYQIFRSVIRSKYRMTYD 331

[133][TOP]
>UniRef100_B8FGU6 Exoribonuclease II n=1 Tax=Desulfatibacillum alkenivorans AK-01
           RepID=B8FGU6_DESAA
          Length = 669

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 2/163 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADT 211
           P  F  E+ + AN L +     ++      R D   L    +D  +T + DDA+S E D 
Sbjct: 253 PIDFPREISQEANALANGSGFRTDTSQ---RRDFTGLPVLTIDGQATLDYDDALSLEMDG 309

Query: 212 G--RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGH 385
              R+ +HI+DVS +++ G  L  EA  RS ++Y+P + I M P  LA   LSL A    
Sbjct: 310 DYFRVGIHISDVSHYVERGSLLDQEAFARSSSIYMPDDKIPMFPPLLAEGLLSLKA---- 365

Query: 386 AHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
                 +    A+S    +  D  + D ++ PSL+R   +LTY
Sbjct: 366 ------DQVRPAISVMVRLDRDAVVLDYEICPSLVRVRRQLTY 402

[134][TOP]
>UniRef100_A1VBI0 Ribonuclease R n=1 Tax=Desulfovibrio vulgaris DP4
           RepID=A1VBI0_DESVV
          Length = 886

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 58/171 (33%), Positives = 79/171 (46%), Gaps = 3/171 (1%)
 Frame = +2

Query: 11  LRASHFYPPTFS-PELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDD 187
           ++ +H  P  F  P L+EAA       P A   G  A R DLRH++   +D A   + DD
Sbjct: 224 VKINHGVPTEFPVPVLEEAATL-----PPAPGGGDFADRIDLRHMEFVTIDGARARDFDD 278

Query: 188 AMSWEADTG--RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGL 361
           A+  E      RLWV IADVS +++PG  +  EAL RS + Y P     MLP  L+    
Sbjct: 279 AICVEEQGKGWRLWVAIADVSHYVRPGSAMDREALERSNSYYFPQSVEPMLPEALSNGLC 338

Query: 362 SLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
           SL+               LA+        +GS G  +  P++I    RLTY
Sbjct: 339 SLNPRVPR----------LAMVAEIYFFGEGSPGKCKFYPAVIESKARLTY 379

[135][TOP]
>UniRef100_Q2BIF4 Ribonuclease R n=1 Tax=Neptuniibacter caesariensis
           RepID=Q2BIF4_9GAMM
          Length = 881

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 54/148 (36%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
 Frame = +2

Query: 86  GPLASEVGPSAC--RTDLRHLDSYAVDSASTFEVDDAMSWEADTG---RLWVHIADVSAW 250
           G LA+EV  +A   R DLR L    +D     + DDA+  E       RLWV IADVS +
Sbjct: 253 GELAAEVEENAKQNRVDLRDLPLVTIDGEDAKDFDDAVYAERKKSGGWRLWVAIADVSWY 312

Query: 251 LKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSF 430
           ++PG  L  EA +RS + Y P   + MLP EL  +GL     + + HV       LA+  
Sbjct: 313 VRPGSELDNEAFKRSNSTYFPEFVVPMLP-ELLSNGL----CSLNPHVDR-----LAMVC 362

Query: 431 GFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
             T++E G+L   +   ++I+   RLTY
Sbjct: 363 EMTISESGNLSGYKFYEAVIQSHARLTY 390

[136][TOP]
>UniRef100_Q1NRA8 Exoribonuclease II n=1 Tax=delta proteobacterium MLMS-1
           RepID=Q1NRA8_9DELT
          Length = 663

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 52/164 (31%), Positives = 80/164 (48%), Gaps = 2/164 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADT 211
           P  F+PE   AA  +    P A+E+     R DLR L    +D AST ++DDA+  +   
Sbjct: 246 PVEFAPEELAAAEAM--GEPEAAELLAEG-RRDLRQLPVMTIDGASTRDLDDALHIQRQG 302

Query: 212 G--RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGH 385
              ++ +HIADV+ ++KPG  L   A+RR  +LY P   + MLP  L+ +  SL A    
Sbjct: 303 ANFQVGIHIADVAHFVKPGSILFNAAVRRVTSLYFPEGQVPMLPPRLSENLCSLLAGRPR 362

Query: 386 AHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                      A+SF  T+   G + D  +  +++    RL Y+
Sbjct: 363 P----------AMSFLLTITPQGEIVDSSIEATVVEVKKRLDYD 396

[137][TOP]
>UniRef100_Q728Y5 Ribonuclease R n=2 Tax=Desulfovibrio vulgaris RepID=Q728Y5_DESVH
          Length = 886

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 58/171 (33%), Positives = 79/171 (46%), Gaps = 3/171 (1%)
 Frame = +2

Query: 11  LRASHFYPPTFS-PELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDD 187
           ++ +H  P  F  P L+EAA       P A   G  A R DLRH++   +D A   + DD
Sbjct: 224 VKINHGVPTEFPVPVLEEAATL-----PPAPGGGDFADRIDLRHMEFVTIDGARARDFDD 278

Query: 188 AMSWEADTG--RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGL 361
           A+  E      RLWV IADVS +++PG  +  EAL RS + Y P     MLP  L+    
Sbjct: 279 AICVEEQGKGWRLWVAIADVSHYVRPGSAMDREALERSNSYYFPQSVEPMLPEALSNGLC 338

Query: 362 SLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
           SL+               LA+        +GS G  +  P++I    RLTY
Sbjct: 339 SLNPRVPR----------LAMVAEIYFFGEGSPGKCKFYPAVIESKARLTY 379

[138][TOP]
>UniRef100_C1SGC4 Ribonuclease R n=1 Tax=Denitrovibrio acetiphilus DSM 12809
           RepID=C1SGC4_9BACT
          Length = 682

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 48/133 (36%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGR--LWVHIADVSAWLKPGEPLTTEALRRS 295
           RTDLR L +  +D  +  + DDA+S E       L+VHIADV  +++PG P+  EA RR 
Sbjct: 232 RTDLRSLPTVTIDGETAKDFDDAISIEKTENEFILYVHIADVCHFVQPGTPVDNEAYRRG 291

Query: 296 CTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQV 475
            + Y P   + MLP  L         SNG   +   E+  LAL+   T  +DG       
Sbjct: 292 TSFYFPEFAVPMLPESL---------SNGLCSLRPNEDR-LALTAKITYTKDGQRKKAYF 341

Query: 476 MPSLIRRPWRLTY 514
             S+I    RLTY
Sbjct: 342 YRSIINSDRRLTY 354

[139][TOP]
>UniRef100_UPI0001698860 ribonuclease II family protein n=1 Tax=Endoriftia persephone
           'Hot96_1+Hot96_2' RepID=UPI0001698860
          Length = 228

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
 Frame = +2

Query: 110 PSACRTDLRHLDSYAVDSASTFEVDDAMSWEADTGRLWVHIADVSAWLKPGEPLTTEALR 289
           P   R DL HL +YA+D A   + DDA+S   D  R+WVH+AD +A + P   +  EA  
Sbjct: 15  PEDQRLDLTHLTAYAIDDAGNQDPDDAVS--LDDERIWVHVADAAALVTPESEIDIEARS 72

Query: 290 RSCTLYLPTETITMLPLELAR-DGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGD 466
           R   LY P + + MLP  +    GL L   +             ALS GF ++E G + D
Sbjct: 73  RGSNLYSPEQIVPMLPPGITHLLGLGLQQESP------------ALSIGFLLSEAGEVMD 120

Query: 467 PQVMPSLIRRPWRLTYE 517
            Q+  + ++   RL+Y+
Sbjct: 121 VQMQLTRLKVE-RLSYD 136

[140][TOP]
>UniRef100_Q0JHU4 Os01g0841800 protein n=3 Tax=Oryza sativa Japonica Group
           RepID=Q0JHU4_ORYSJ
          Length = 548

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 3/162 (1%)
 Frame = +2

Query: 41  FSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW-EADTGR 217
           ++ E+  AA  LL   P + +      R DL  L  YA+D     E+DDA+S      GR
Sbjct: 352 YTEEVLSAAEELLVDCPDSDK----DIRKDLSTLKVYAIDVDEADELDDALSAARLPDGR 407

Query: 218 L--WVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAH 391
           +  W+H+AD ++ ++P   +  EA+ R  +++LPT T  M P  LA + +SL    G   
Sbjct: 408 IKVWIHVADPTSLVQPRSIIDREAMHRGTSIFLPTATFPMFPERLAMNAMSLQQGRG--- 464

Query: 392 VSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                    +++    +  DGS+ +  +  S+I+  + LTYE
Sbjct: 465 -------CKSVTVSVILQPDGSIAEYSIENSIIKPTYMLTYE 499

[141][TOP]
>UniRef100_A1AXH8 Ribonuclease II n=1 Tax=Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica) RepID=A1AXH8_RUTMC
          Length = 601

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 48/124 (38%), Positives = 68/124 (54%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGRLWVHIADVSAWLKPGEPLTTEALRRSCT 301
           R DL +L SYA+D+A + + DDA+S + D  +++VHIADVS     G  L   A  R+  
Sbjct: 220 RVDLTYLSSYAIDNADSNDADDAISIDGD--KIFVHIADVSLIATVGSELDAYAQERASN 277

Query: 302 LYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMP 481
           LYLP + I MLP+   +       + G A  S       ALS GFT+ E G +   +V+ 
Sbjct: 278 LYLPEQIIHMLPISATK-----MCALGLAETSN------ALSIGFTL-ESGEIDHIEVVH 325

Query: 482 SLIR 493
           SLI+
Sbjct: 326 SLIK 329

[142][TOP]
>UniRef100_A0KG59 Ribonuclease R n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC
           7966 RepID=A0KG59_AERHH
          Length = 799

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 46/117 (39%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P T+  E+ +   GL    P  ++ G    R DLR L    +D     + DDA+  
Sbjct: 231 THGIPHTWPEEVTKEVAGLGEQVPEKAKEG----RIDLRALPLVTIDGEDARDFDDAVFC 286

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGL 361
           EA  G   RLWV IADVSA++KPG  L TEA +R  ++Y P   + MLP E+  +GL
Sbjct: 287 EAKRGGGWRLWVAIADVSAYVKPGTALDTEAYQRGNSVYFPEFVVPMLP-EVLSNGL 342

[143][TOP]
>UniRef100_C6YKQ8 Ribonuclease R n=1 Tax=Vibrio cholerae MO10 RepID=C6YKQ8_VIBCH
          Length = 821

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  +  E+++   GL    P  ++ G    R DLR L    +D     + DDA+  
Sbjct: 237 THQIPHEWPAEVEQQVAGLTEEVPEEAKQG----RVDLRALPLVTIDGEDARDFDDAVYC 292

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           EA  G   RLWV IADVS +++P   L  EA+ R  ++Y P++ + MLP  L        
Sbjct: 293 EAKKGGGWRLWVAIADVSYYVRPDTALDKEAINRGNSVYFPSQVVPMLPEVL-------- 344

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+E G L   +   +++    RLTY
Sbjct: 345 -SNGLCSLNPQVDR-LCMVCEMTVSETGKLSGYKHYEAVMNSHARLTY 390

[144][TOP]
>UniRef100_C4UM56 Ribonuclease R n=1 Tax=Yersinia ruckeri ATCC 29473
           RepID=C4UM56_YERRU
          Length = 837

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P T+ P++++    L    P  ++ G    R DLR L    +D     + DDA+  
Sbjct: 230 THEIPHTWPPQVEKQVADLKEQVPEEAKKG----RVDLRELPLVTIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++PG  L  EA  R  ++Y P++ + MLP  L        
Sbjct: 286 EKKRGGGWRLWVAIADVSYYVRPGTALDAEARARGNSVYFPSQVVPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+  G L   +   +++    RLTY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTVSSQGKLSSYKFYEAVMSSHARLTY 383

[145][TOP]
>UniRef100_B2L1Z1 Exoribonuclease R n=1 Tax=Aeromonas hydrophila RepID=B2L1Z1_AERHY
          Length = 797

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 46/117 (39%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P T+  E+ +   GL    P  ++ G    R DLR L    +D     + DDA+  
Sbjct: 231 THGIPHTWPEEVTKEVAGLGEQVPEKAKEG----RIDLRALPLVTIDGEDARDFDDAVFC 286

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGL 361
           EA  G   RLWV IADVSA++KPG  L TEA +R  ++Y P   + MLP E+  +GL
Sbjct: 287 EAKRGGGWRLWVAIADVSAYVKPGTALDTEAYQRGNSVYFPEFVVPMLP-EVLSNGL 342

[146][TOP]
>UniRef100_A3GU97 Ribonuclease R (Fragment) n=1 Tax=Vibrio cholerae NCTC 8457
           RepID=A3GU97_VIBCH
          Length = 531

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  +  E+++   GL    P  ++ G    R DLR L    +D     + DDA+  
Sbjct: 92  THQIPHEWPAEVEQQVAGLTEEVPEEAKQG----RVDLRALPLVTIDGEDARDFDDAVYC 147

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           EA  G   RLWV IADVS +++P   L  EA+ R  ++Y P++ + MLP  L        
Sbjct: 148 EAKKGGGWRLWVAIADVSYYVRPDTALDKEAINRGNSVYFPSQVVPMLPEVL-------- 199

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+E G L   +   +++    RLTY
Sbjct: 200 -SNGLCSLNPQVDR-LCMVCEMTVSETGKLSGYKHYEAVMNSHARLTY 245

[147][TOP]
>UniRef100_A1FAX0 Ribonuclease R (Fragment) n=1 Tax=Vibrio cholerae 2740-80
           RepID=A1FAX0_VIBCH
          Length = 415

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  +  E+++   GL    P  ++ G    R DLR L    +D     + DDA+  
Sbjct: 199 THQIPHEWPAEVEQQVAGLTEEVPEEAKQG----RVDLRALPLVTIDGEDARDFDDAVYC 254

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           EA  G   RLWV IADVS +++P   L  EA+ R  ++Y P++ + MLP  L        
Sbjct: 255 EAKKGGGWRLWVAIADVSYYVRPDTALDKEAINRGNSVYFPSQVVPMLPEVL-------- 306

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+E G L   +   +++    RLTY
Sbjct: 307 -SNGLCSLNPQVDR-LCMVCEMTVSETGKLSGYKHYEAVMNSHARLTY 352

[148][TOP]
>UniRef100_A5F552 Ribonuclease R n=9 Tax=Vibrio cholerae RepID=A5F552_VIBC3
          Length = 821

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  +  E+++   GL    P  ++ G    R DLR L    +D     + DDA+  
Sbjct: 237 THQIPHEWPAEVEQQVAGLTEEVPEEAKQG----RVDLRALPLVTIDGEDARDFDDAVYC 292

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           EA  G   RLWV IADVS +++P   L  EA+ R  ++Y P++ + MLP  L        
Sbjct: 293 EAKKGGGWRLWVAIADVSYYVRPDTALDKEAINRGNSVYFPSQVVPMLPEVL-------- 344

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+E G L   +   +++    RLTY
Sbjct: 345 -SNGLCSLNPQVDR-LCMVCEMTVSETGKLSGYKHYEAVMNSHARLTY 390

[149][TOP]
>UniRef100_B9EUD2 Putative uncharacterized protein n=2 Tax=Oryza sativa
           RepID=B9EUD2_ORYSJ
          Length = 774

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 3/162 (1%)
 Frame = +2

Query: 41  FSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW-EADTGR 217
           ++ E+  AA  LL   P + +      R DL  L  YA+D     E+DDA+S      GR
Sbjct: 347 YTEEVLSAAEELLVDCPDSDK----DIRKDLSTLKVYAIDVDEADELDDALSAARLPDGR 402

Query: 218 L--WVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAH 391
           +  W+H+AD ++ ++P   +  EA+ R  +++LPT T  M P  LA + +SL    G   
Sbjct: 403 IKVWIHVADPTSLVQPRSIIDREAMHRGTSIFLPTATFPMFPERLAMNAMSLQQGRG--- 459

Query: 392 VSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                    +++    +  DGS+ +  +  S+I+  + LTYE
Sbjct: 460 -------CKSVTVSVILQPDGSIAEYSIENSIIKPTYMLTYE 494

[150][TOP]
>UniRef100_Q9KNY1 Ribonuclease R n=8 Tax=Vibrio cholerae RepID=RNR_VIBCH
          Length = 821

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  +  E+++   GL    P  ++ G    R DLR L    +D     + DDA+  
Sbjct: 237 THQIPHEWPAEVEQQVAGLTEEVPEEAKQG----RVDLRALPLVTIDGEDARDFDDAVYC 292

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           EA  G   RLWV IADVS +++P   L  EA+ R  ++Y P++ + MLP  L        
Sbjct: 293 EAKKGGGWRLWVAIADVSYYVRPDTALDKEAINRGNSVYFPSQVVPMLPEVL-------- 344

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+E G L   +   +++    RLTY
Sbjct: 345 -SNGLCSLNPQVDR-LCMVCEMTVSETGKLSGYKHYEAVMNSHARLTY 390

[151][TOP]
>UniRef100_B8DP48 Ribonuclease R n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F'
           RepID=B8DP48_DESVM
          Length = 1037

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 56/170 (32%), Positives = 79/170 (46%), Gaps = 2/170 (1%)
 Frame = +2

Query: 11  LRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDA 190
           ++ +H  P  F PE+ E A  L    P          R DLRHL+   +D A   + DDA
Sbjct: 223 VKINHDVPGDFPPEVLEEARDL----PAVPGRDDMEGRIDLRHLEFVTIDGAKARDFDDA 278

Query: 191 MSWEAD-TG-RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLS 364
           +  E   TG RLWV IADV+ +++PG  +  EA  RS + Y P     MLP  L      
Sbjct: 279 VYVEEQGTGYRLWVAIADVAHYVRPGSAMDREAQARSNSYYFPQSVEPMLPEAL------ 332

Query: 365 LDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
              SNG   ++     +  ++  F  A DG+ G  +   ++I    RLTY
Sbjct: 333 ---SNGLCSLNPRVPRLAMVAETFFYA-DGTPGRSKFYAAIIESKARLTY 378

[152][TOP]
>UniRef100_A1RNJ3 RNAse R n=2 Tax=Shewanella RepID=A1RNJ3_SHESW
          Length = 807

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 3/164 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADT 211
           P T+SP +++    +      A +VG    R DLRHL    +D     + DDA+  E   
Sbjct: 234 PHTWSPVIEKKLRRIPDEVTEADKVG----RVDLRHLPLVTIDGEDARDFDDAVYAEKKA 289

Query: 212 G---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
           G   RLWV IADVS +++    L TEA  R  ++Y P++ I MLP +++    SL     
Sbjct: 290 GGGWRLWVAIADVSYYVRTDSALDTEARARGNSVYFPSQVIPMLPEKISNGLCSL----- 344

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
           + HV       L +    TV+  G L   +  P+++    R TY
Sbjct: 345 NPHVDR-----LCMVAEMTVSAKGKLSGYKFYPAVMYSHARFTY 383

[153][TOP]
>UniRef100_B6AMJ8 Exoribonuclease II n=1 Tax=Leptospirillum sp. Group II '5-way CG'
           RepID=B6AMJ8_9BACT
          Length = 744

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
 Frame = +2

Query: 101 EVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEAD---TGRLWVHIADVSAWLKPGEPL 271
           EV PS  R DLRHL+   +D     + DDA+S       T ++ +HIADV+A++ PG  L
Sbjct: 246 EVEPSENRVDLRHLEIMTIDGDRARDFDDALSVVESPDGTFQIGIHIADVAAYVLPGSEL 305

Query: 272 TTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAED 451
             EA RR  ++Y P   + M P  L+   LSL+               LA +    ++  
Sbjct: 306 DKEAFRRGTSVYFPDRVVPMFPEVLSNGVLSLNPDEDR----------LARTVMVRMSPA 355

Query: 452 GSLGDPQVMPSLIRRPWRLTY 514
           G + +  +  S+IR   R TY
Sbjct: 356 GQVLESSIFRSVIRSRLRATY 376

[154][TOP]
>UniRef100_B5JY34 Ribonuclease R n=1 Tax=gamma proteobacterium HTCC5015
           RepID=B5JY34_9GAMM
          Length = 762

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 46/119 (38%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           SH  P  F  E+ E +N L      A + G    RTD RHL    +D     + DDA+  
Sbjct: 256 SHNLPNEFPEEVLEESNALGDVVDEADKQG----RTDYRHLPLITIDGEDAKDFDDAVYA 311

Query: 200 EADTG--RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           EA+    RL+V IADVS ++KP  PL  EA +R+ ++Y P   I MLP  L+    SL+
Sbjct: 312 EANEQGWRLYVAIADVSHYVKPQSPLDQEAAKRATSVYFPGRVIPMLPESLSNGLCSLN 370

[155][TOP]
>UniRef100_A2V290 Ribonuclease R n=1 Tax=Shewanella putrefaciens 200
           RepID=A2V290_SHEPU
          Length = 807

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 3/164 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADT 211
           P T+SP +++    +      A +VG    R DLRHL    +D     + DDA+  E   
Sbjct: 234 PHTWSPVIEKKLRRIPDEVTEADKVG----RVDLRHLPLVTIDGEDARDFDDAVYAEKKA 289

Query: 212 G---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
           G   RLWV IADVS +++    L TEA  R  ++Y P++ I MLP +++    SL     
Sbjct: 290 GGGWRLWVAIADVSYYVRTDSALDTEARARGNSVYFPSQVIPMLPEKISNGLCSL----- 344

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
           + HV       L +    TV+  G L   +  P+++    R TY
Sbjct: 345 NPHVDR-----LCMVAEMTVSAKGKLSGYKFYPAVMYSHARFTY 383

[156][TOP]
>UniRef100_Q5L6M9 Putative ribonuclease n=1 Tax=Chlamydophila abortus
           RepID=Q5L6M9_CHLAB
          Length = 682

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 47/135 (34%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGR---LWVHIADVSAWLKPGEPLTTEALRR 292
           R DLR L  + +DS +  + DDA+S   D      L VHIADVS ++ P   L  EA +R
Sbjct: 207 RKDLRDLLCFTIDSITAKDFDDAVSLTYDNNDNYILGVHIADVSHYVTPHSALDQEASKR 266

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             ++Y P + I MLP  L+ +  SL  +             LA+S   T  + G L D +
Sbjct: 267 CNSIYFPGKVIPMLPPALSDNLCSLKPNVDR----------LAVSVFMTFTKSGHLSDYE 316

Query: 473 VMPSLIRRPWRLTYE 517
           +  S+IR  +R+TY+
Sbjct: 317 IFRSVIRSKYRMTYD 331

[157][TOP]
>UniRef100_B3E785 Ribonuclease R n=1 Tax=Geobacter lovleyi SZ RepID=B3E785_GEOLS
          Length = 752

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSAC--RTDLRHLDSYAVDSASTFEVDDAMS--W 199
           P TF PE       L  A  + S+VG +    R DLR L +  +D  +  + DDA+S   
Sbjct: 219 PHTFEPET------LAEAQAIPSQVGKNDLKDRVDLRKLPTVTIDGETAKDFDDAVSIRQ 272

Query: 200 EADTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASN 379
           E    RLWV IADVS +++PG  L  EA  R  ++Y P   I MLP  L+    SL    
Sbjct: 273 EGHNFRLWVSIADVSHYIEPGSMLDREAYLRGTSVYFPDRCIPMLPERLSNGICSL---- 328

Query: 380 GHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            + H+       L ++      + G + +     S+I+   RLTY
Sbjct: 329 -NPHLDR-----LTMTAEMLFDQQGRMLESSFYSSVIKSDARLTY 367

[158][TOP]
>UniRef100_B1IDC1 Ribonuclease R n=1 Tax=Clostridium botulinum B1 str. Okra
           RepID=B1IDC1_CLOBK
          Length = 725

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 3/164 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADT 211
           P  F P++Q  A+ +  A P          R DLR L    +D     ++DDA+S E  +
Sbjct: 218 PEEFPPKVQSYADNISEAIPEEEYKR----REDLRDLTIVTIDGEDAKDLDDAISLEKLS 273

Query: 212 GR---LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
                L VHIADVS ++K   PL  EAL+R+ ++YL    I MLP +L         SNG
Sbjct: 274 NGNYYLGVHIADVSHYVKEKNPLDKEALKRATSVYLIDRVIPMLPKKL---------SNG 324

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
              ++ + +  L LS    + ++G + D +V+ S+I+   R+TY
Sbjct: 325 ICSLNPKIDR-LTLSCFMEIDKNGKVVDHRVVESIIKSTERMTY 367

[159][TOP]
>UniRef100_A9L116 Ribonuclease R n=1 Tax=Shewanella baltica OS195 RepID=A9L116_SHEB9
          Length = 807

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 3/164 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADT 211
           P T+SP +++    +      A +VG    R DLRHL    +D     + DDA+  E   
Sbjct: 234 PHTWSPVIEKKLRRIPDEVTDADKVG----RVDLRHLPLVTIDGEDARDFDDAVYAEKKA 289

Query: 212 G---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
           G   RLWV IADVS +++    L TEA  R  ++Y P++ I MLP +++    SL     
Sbjct: 290 GGGWRLWVAIADVSYYVRTDSALDTEARARGNSVYFPSQVIPMLPEKISNGLCSL----- 344

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
           + HV       L +    TV+  G L   +  P+++    R TY
Sbjct: 345 NPHVDR-----LCMVAEMTVSAKGKLSGYKFYPAVMYSHARFTY 383

[160][TOP]
>UniRef100_A7G9Y5 Ribonuclease R n=1 Tax=Clostridium botulinum F str. Langeland
           RepID=A7G9Y5_CLOBL
          Length = 725

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 3/164 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADT 211
           P  F P++Q  A+ +  A P          R DLR L    +D     ++DDA+S E  +
Sbjct: 218 PEEFPPKVQSYADNISEAIPEEEYKR----REDLRDLTIVTIDGEDAKDLDDAISLEKLS 273

Query: 212 GR---LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
                L VHIADVS ++K   PL  EAL+R+ ++YL    I MLP +L         SNG
Sbjct: 274 NGNYYLGVHIADVSHYVKEKNPLDKEALKRATSVYLIDRVIPMLPKKL---------SNG 324

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
              ++ + +  L LS    + ++G + D +V+ S+I+   R+TY
Sbjct: 325 ICSLNPKIDR-LTLSCFMEIDKNGKVVDHRVVESIIKSTERMTY 367

[161][TOP]
>UniRef100_A6WJ75 Ribonuclease R n=2 Tax=Shewanella baltica RepID=A6WJ75_SHEB8
          Length = 807

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 3/164 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADT 211
           P T+SP +++    +      A +VG    R DLRHL    +D     + DDA+  E   
Sbjct: 234 PHTWSPVIEKKLRRIPDEVTDADKVG----RVDLRHLPLVTIDGEDARDFDDAVYAEKKA 289

Query: 212 G---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
           G   RLWV IADVS +++    L TEA  R  ++Y P++ I MLP +++    SL     
Sbjct: 290 GGGWRLWVAIADVSYYVRTDSALDTEARARGNSVYFPSQVIPMLPEKISNGLCSL----- 344

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
           + HV       L +    TV+  G L   +  P+++    R TY
Sbjct: 345 NPHVDR-----LCMVAEMTVSAKGKLSGYKFYPAVMYSHARFTY 383

[162][TOP]
>UniRef100_A5GLA4 Exoribonuclease R/ribonuclease II n=1 Tax=Synechococcus sp. WH 7803
           RepID=A5GLA4_SYNPW
          Length = 649

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 44/114 (38%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
 Frame = +2

Query: 41  FSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEA---DT 211
           FS EL   A  L+    + ++ G S  R DL HL    +D A T ++DDA+  E    D 
Sbjct: 220 FSAELTAEAERLMRCS-MQAQPGDSE-RRDLTHLACVTIDDAETKDIDDALGLERLANDH 277

Query: 212 GRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDA 373
            R+W+HIAD S  +  G PL  EA RR  +LYL    + M P +L+ +  SL A
Sbjct: 278 LRIWIHIADPSRLITAGSPLDLEARRRGSSLYLSRGLLPMFPSKLSSEVFSLKA 331

[163][TOP]
>UniRef100_C2ECN9 Ribonuclease R 1 n=1 Tax=Lactobacillus ruminis ATCC 25644
           RepID=C2ECN9_9LACO
          Length = 793

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 3/134 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMS-WEADTGR--LWVHIADVSAWLKPGEPLTTEALRR 292
           R D+R      +D+  + ++DDA++ W+   G   L VHIADVS ++ PG PL  EA  R
Sbjct: 261 RRDIRDQQLVTIDAIESKDLDDAVTAWKLPNGNYHLGVHIADVSHYVTPGTPLDDEAFSR 320

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             ++YL    I MLP +L         SNG   ++ + +  LALS    +  +G +   +
Sbjct: 321 GTSVYLTDRVIPMLPAKL---------SNGICSLNPKVDR-LALSCDMEITPEGEIIAHE 370

Query: 473 VMPSLIRRPWRLTY 514
           + PS+I+   R+TY
Sbjct: 371 IYPSVIKTTERMTY 384

[164][TOP]
>UniRef100_C1FQW8 Ribonuclease R n=2 Tax=Clostridium botulinum RepID=C1FQW8_CLOBJ
          Length = 725

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 3/164 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADT 211
           P  F P++Q  A+ +  A P          R DLR L    +D     ++DDA+S E  +
Sbjct: 218 PEEFPPKVQSYADNISEAIPEEEYKR----REDLRDLTIVTIDGEDAKDLDDAISLEKLS 273

Query: 212 GR---LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
                L VHIADVS ++K   PL  EAL+R+ ++YL    I MLP +L         SNG
Sbjct: 274 NGNYYLGVHIADVSHYVKEKNPLDKEALKRATSVYLIDRVIPMLPKKL---------SNG 324

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
              ++ + +  L LS    + ++G + D +V+ S+I+   R+TY
Sbjct: 325 ICSLNPKIDR-LTLSCFMEIDKNGKVVDHRVVESIIKSTERMTY 367

[165][TOP]
>UniRef100_A4BI97 Exoribonuclease R n=1 Tax=Reinekea blandensis MED297
           RepID=A4BI97_9GAMM
          Length = 647

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 56/164 (34%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAM-SWEAD 208
           P  FS    + A  L  AGP   E  PS  R DL  L    +D+AST ++DDA+ +   +
Sbjct: 182 PEAFSDAELKQAKALAEAGP---ETDPS--RQDLTDLPFVTIDAASTKDMDDALFARPTE 236

Query: 209 TG-RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGH 385
            G +L V IAD SA++     L   A +R  T YLP  T+ MLP  LA   +SL      
Sbjct: 237 NGWQLSVAIADASAYIPLDSELDKAAQKRLTTTYLPGLTLPMLPEILADSAMSL------ 290

Query: 386 AHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
             V +E     A+ F   +  DG++ D ++ P+ +R   +L Y+
Sbjct: 291 --VPDETRP--AMIFQMQIDRDGNVSDFEIFPATVRSQAKLAYD 330

[166][TOP]
>UniRef100_UPI000179487B hypothetical protein CLOSPO_00726 n=1 Tax=Clostridium sporogenes
           ATCC 15579 RepID=UPI000179487B
          Length = 725

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEA-- 205
           P  F P++Q  A+ +  A P          R DLR L    +D     ++DDA+S E   
Sbjct: 218 PEEFPPKVQSYADNISEAIPEEEYKR----RKDLRDLTIVTIDGEDAKDLDDAISLERLP 273

Query: 206 -DTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
                L VHIADVS ++K   PL  EAL+R+ ++YL    I MLP +L         SNG
Sbjct: 274 NGNYYLGVHIADVSHYVKEKNPLDKEALKRATSVYLIDRVIPMLPKKL---------SNG 324

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
              ++ + +  L LS    + ++G + D +V+ S+I+   R+TY
Sbjct: 325 ICSLNPKIDR-LTLSCFMEIDKNGKVVDHKVVESIIKSTERMTY 367

[167][TOP]
>UniRef100_Q3B5H6 3'-5' exoribonuclease, VacB and RNase II n=1 Tax=Chlorobium
           luteolum DSM 273 RepID=Q3B5H6_PELLD
          Length = 762

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 3/163 (1%)
 Frame = +2

Query: 38  TFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADTGR 217
           TF  E+ +AA+ +   G    ++     R D+R    + +D     + DDA+S E     
Sbjct: 269 TFDKEIVKAASAM-KMGVTDKDLQE---RLDVRDKVLFTIDPVDAKDFDDALSVEPLENG 324

Query: 218 LW---VHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHA 388
           LW   VHIADVS ++    PL  EAL+R+ ++YL    I MLP  L+ D  SL+      
Sbjct: 325 LWKIGVHIADVSHYVTEDSPLDKEALKRATSVYLVDRVIPMLPSRLSEDICSLNPGVDR- 383

Query: 389 HVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                    +A S  FT+ EDG +   +   ++I    R TYE
Sbjct: 384 ---------MAFSVFFTMTEDGKVQKHEFHKTVIHSKRRFTYE 417

[168][TOP]
>UniRef100_Q2NW57 Ribonuclease R (RNase R) n=1 Tax=Sodalis glossinidius str.
           'morsitans' RepID=Q2NW57_SODGM
          Length = 764

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 4/169 (2%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  + PE+++    L    P A++ G    R DLR L    +D     + DDA+  
Sbjct: 230 THDIPYVWPPEVEQQLADLQEDVPEAAKRG----RIDLRALPLVTIDGEDARDFDDAVYC 285

Query: 200 EADTG----RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSL 367
           E        RLWV IADVS +++P  PL  EA RR+ ++Y P++ I MLP  L       
Sbjct: 286 EKKRSGGGWRLWVAIADVSYYVRPHTPLDQEASRRATSVYFPSQVIPMLPEVL------- 338

Query: 368 DASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
             SNG   ++ + +  L +    T++  G L   +   +++    RLTY
Sbjct: 339 --SNGLCSLNPQVDR-LCMVCEMTISAQGRLSSYKFYEAVMNSHARLTY 384

[169][TOP]
>UniRef100_Q01VX0 RNAse R n=1 Tax=Candidatus Solibacter usitatus Ellin6076
           RepID=Q01VX0_SOLUE
          Length = 762

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 55/168 (32%), Positives = 79/168 (47%), Gaps = 4/168 (2%)
 Frame = +2

Query: 23  HFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW- 199
           H  P  F PE+ E A  +    P A   G    R D R +D   +D  +  + DDA+ W 
Sbjct: 238 HHLPHQFPPEVIEQAQAIPGVIPPAEFEG----RRDFRGMDIVTIDGETARDFDDAV-WV 292

Query: 200 -EADTGR--LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
            +  +G   L VHIADVS +++PG P+  EAL R  ++Y P   + MLP EL+ +  SL 
Sbjct: 293 DKLPSGNYVLHVHIADVSHYVRPGTPIDREALLRGTSVYFPDRAVPMLPFELSTNLCSL- 351

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
                  V  E+   L LS    +   G +   +    +IR   R+TY
Sbjct: 352 -------VPLEDR--LVLSALMEIDHRGEVVRQEFTEGVIRSVARMTY 390

[170][TOP]
>UniRef100_C6CKZ7 Ribonuclease R n=1 Tax=Dickeya zeae Ech1591 RepID=C6CKZ7_DICZE
          Length = 822

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P ++ P+++E  + L    P  ++ G    R DLR L    +D     + DDA+  
Sbjct: 230 THEIPHSWPPKVEEQVSDLTDEVPENAKKG----RVDLRALPLVTIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++PG  L  EA  R  ++Y P++ + MLP  L        
Sbjct: 286 EKKRGGGWRLWVAIADVSYYVRPGTALDHEARARGTSVYFPSQVVPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+  G L       +++    RLTY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTVSSQGKLSGYTFYEAVMSSHARLTY 383

[171][TOP]
>UniRef100_C6CAC4 Ribonuclease R n=1 Tax=Dickeya dadantii Ech703 RepID=C6CAC4_DICDC
          Length = 819

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P T+S ++Q     L    P +++ G    R DLR L    +D     + DDA+  
Sbjct: 230 THEIPHTWSQQVQNQVADLTEEVPESAKKG----RVDLRTLPLVTIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++PG  L  EA  R  ++Y P++ + MLP  L        
Sbjct: 286 EKKRGGGWRLWVAIADVSYYVRPGTALDHEARARGTSVYFPSQVVPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+  G L   +   +++    RLTY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTVSTQGKLSGFKFYEAVMSSHARLTY 383

[172][TOP]
>UniRef100_B1KTK0 Ribonuclease R n=1 Tax=Clostridium botulinum A3 str. Loch Maree
           RepID=B1KTK0_CLOBM
          Length = 725

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADT 211
           P  F P++Q  A+ +  A P          R DLR L    +D     ++DDA+S E  +
Sbjct: 218 PEEFPPKVQSYADNISEAIPEEEYKR----REDLRDLTIVTIDGEDAKDLDDAISLEKLS 273

Query: 212 GR---LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
                L VHIADVS ++K   PL  EAL+R+ ++YL    I MLP +L         SNG
Sbjct: 274 NGNYYLGVHIADVSHYVKEKNPLDKEALKRATSVYLIDRVIPMLPKKL---------SNG 324

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
              ++ + +  L LS    + + G + D +V+ S+I+   R+TY
Sbjct: 325 ICSLNPKIDR-LTLSCFMEIDKSGKVVDHRVVESIIKSTERMTY 367

[173][TOP]
>UniRef100_A8G8V6 Ribonuclease R n=1 Tax=Serratia proteamaculans 568
           RepID=A8G8V6_SERP5
          Length = 828

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  + P++++    L    P A++ G    R DLR L    +D     + DDA+  
Sbjct: 230 THEIPHVWPPQVEKQVADLSEQVPEAAKKG----RVDLRQLPLVTIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++P   L  EA  R+ ++Y P+E I MLP  L        
Sbjct: 286 EKKRGGGWRLWVAIADVSYYVRPRTALDDEARNRATSVYFPSEVIPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    T++  G L   +   +++    RLTY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTISAQGRLSTAKFYEAVMSSHARLTY 383

[174][TOP]
>UniRef100_A5HYC5 Ribonuclease R n=2 Tax=Clostridium botulinum A RepID=A5HYC5_CLOBH
          Length = 725

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEA-- 205
           P  F P++Q  A+ +  A P          R DLR L    +D     ++DDA+S E   
Sbjct: 218 PEEFPPKVQSYADNISEAIPEEEYKR----REDLRDLTIVTIDGEDAKDLDDAISLEKLP 273

Query: 206 -DTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
                L VHIADVS ++K   PL  EAL+R+ ++YL    I MLP +L         SNG
Sbjct: 274 NGNYYLGVHIADVSHYVKEKNPLDKEALKRATSVYLIDRVIPMLPKKL---------SNG 324

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
              ++ + +  L LS    + ++G + D +V+ S+I+   R+TY
Sbjct: 325 ICSLNPKIDR-LTLSCFMEIDKNGKVVDHRVVESIIKSTERMTY 367

[175][TOP]
>UniRef100_C9PK35 Ribonuclease R n=1 Tax=Vibrio furnissii CIP 102972
           RepID=C9PK35_VIBFU
          Length = 816

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  +  E+++   GL    P  ++ G    R DLR L    +D     + DDA+  
Sbjct: 237 THQIPHVWPQEVEQQITGLGEEVPEEAKQG----RVDLRALPLVTIDGEDARDFDDAVFC 292

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           EA  G   RLWV IADVS +++P   L  EA+ R  ++Y P++ + MLP  L        
Sbjct: 293 EAKKGGGWRLWVAIADVSYYVRPNSALDKEAINRGNSVYFPSQVVPMLPEVL-------- 344

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    T+++ G L   +   +++    RLTY
Sbjct: 345 -SNGLCSLNPQVDR-LCMVCEMTISDKGKLSGYKHYEAVMNSHARLTY 390

[176][TOP]
>UniRef100_C9P233 Ribonuclease R n=1 Tax=Vibrio metschnikovii CIP 69.14
           RepID=C9P233_VIBME
          Length = 815

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  +  E+ +  +GL    P  ++ G    R DLR L    +D     + DDA+  
Sbjct: 237 THQIPHEWPDEVLKQVSGLKEEVPEEAKQG----RVDLRQLPLVTIDGEDARDFDDAVYC 292

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           EA      RLWV IADVS +++PG  L  EA  R  ++Y P++ + MLP  L        
Sbjct: 293 EARKEGGWRLWVAIADVSYYVRPGSALDKEATNRGNSVYFPSQVVPMLPEVL-------- 344

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    T+++ G L D Q   +++    RLTY
Sbjct: 345 -SNGLCSLNPQVDR-LCMVCEMTISDGGKLIDYQHYEAVMSSHARLTY 390

[177][TOP]
>UniRef100_C8N9X2 Ribonuclease R n=1 Tax=Cardiobacterium hominis ATCC 15826
           RepID=C8N9X2_9GAMM
          Length = 831

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 47/134 (35%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWE--ADTGRLWVHIADVSAWLKPGEPLTTEALRRS 295
           R DLRHL    +D  S  + DDA+  E   +  RL+V IADV+ +++P  PL  EA  R 
Sbjct: 272 RLDLRHLPFVTIDGISARDFDDAVYAEKRGENYRLYVAIADVAHYVRPDSPLDIEAYNRG 331

Query: 296 CTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQV 475
            ++Y P   I MLP +L+    SL+ +             LA+    T+A DGS+     
Sbjct: 332 TSVYFPDRVIPMLPEKLSNGLCSLNPNVDR----------LAMVCEITLAPDGSIKRSAF 381

Query: 476 MPSLIRRPWRLTYE 517
             ++I    RLTYE
Sbjct: 382 HDAVIHSHARLTYE 395

[178][TOP]
>UniRef100_C7HG56 Ribonuclease R n=1 Tax=Clostridium thermocellum DSM 2360
           RepID=C7HG56_CLOTM
          Length = 757

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 48/134 (35%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEA---DTGRLWVHIADVSAWLKPGEPLTTEALRR 292
           R DLR L    +D     ++DDA+S E       RL VHIADVS ++K G PL  EAL+R
Sbjct: 246 RRDLRDLTMVTIDGEDAKDLDDAVSIERLPNGNYRLGVHIADVSYYVKEGSPLDKEALKR 305

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             ++YL    I MLP EL         SNG   ++ + +  LA +    + + G + D +
Sbjct: 306 GTSVYLVDRVIPMLPKEL---------SNGICSLNPKVDR-LAFTVMMEIDKSGRVVDHE 355

Query: 473 VMPSLIRRPWRLTY 514
           +  S+I    R+TY
Sbjct: 356 IFESVINVNERMTY 369

[179][TOP]
>UniRef100_A4CUF3 Exoribonuclease II n=1 Tax=Synechococcus sp. WH 7805
           RepID=A4CUF3_SYNPV
          Length = 651

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 51/159 (32%), Positives = 69/159 (43%), Gaps = 3/159 (1%)
 Frame = +2

Query: 50  ELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEA---DTGRL 220
           E +   NG L   P  SE      R DL H     +D A T ++DDA+  E    D  R+
Sbjct: 229 EAERVLNGCLDDHPGDSE------RIDLTHQTCVTIDDAETRDIDDALGLERLADDQLRI 282

Query: 221 WVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHVSE 400
           W+HIAD    +  G PL  EA RR  +LYL    + M P  L+ +  SL A   +A    
Sbjct: 283 WIHIADPGRLITTGSPLDLEARRRGSSLYLARGILPMFPSNLSTEVFSLKAGQRNA---- 338

Query: 401 EENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                 A S    +   G +    +  S +   +RLTYE
Sbjct: 339 ------AWSTWVDLDHTGDVKTSGMCRSWVTPRYRLTYE 371

[180][TOP]
>UniRef100_UPI00005CDADA VacB protein n=1 Tax=Xylella fastidiosa 9a5c RepID=UPI00005CDADA
          Length = 805

 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 47/120 (39%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
 Frame = +2

Query: 23  HFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWE 202
           H  P  FS E+ +AA    +A PL  E G    R DLR L    +D     + DDA+  E
Sbjct: 318 HQLPHVFSQEVLDAA----AAVPLTVESGMVGGRVDLRALPLVTIDGEDAKDFDDAVYCE 373

Query: 203 ADTG--RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDAS 376
           ++    RL V IADVS +++PG PL  EAL R+ ++Y P   + MLP  L+    SL  S
Sbjct: 374 SNRWGFRLVVAIADVSHYVRPGTPLDEEALTRATSVYFPGFVVPMLPETLSNGICSLKPS 433

[181][TOP]
>UniRef100_Q9PBZ8 VacB protein n=1 Tax=Xylella fastidiosa RepID=Q9PBZ8_XYLFA
          Length = 717

 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 47/120 (39%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
 Frame = +2

Query: 23  HFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWE 202
           H  P  FS E+ +AA    +A PL  E G    R DLR L    +D     + DDA+  E
Sbjct: 230 HQLPHVFSQEVLDAA----AAVPLTVESGMVGGRVDLRALPLVTIDGEDAKDFDDAVYCE 285

Query: 203 ADTG--RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDAS 376
           ++    RL V IADVS +++PG PL  EAL R+ ++Y P   + MLP  L+    SL  S
Sbjct: 286 SNRWGFRLVVAIADVSHYVRPGTPLDEEALTRATSVYFPGFVVPMLPETLSNGICSLKPS 345

[182][TOP]
>UniRef100_B4U994 Ribonuclease R n=1 Tax=Hydrogenobaculum sp. Y04AAS1
           RepID=B4U994_HYDS0
          Length = 694

 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 49/134 (36%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDA--MSWEADTGRLWVHIADVSAWLKPGEPLTTEALRRS 295
           R DLR    + +D     + DDA  +  E D  RL+VHIADVS ++K G  L  EA  R 
Sbjct: 240 RKDLRDQPCFTIDPIRAKDFDDAVYLEKEGDDYRLFVHIADVSLFVKFGSALDKEAYERG 299

Query: 296 CTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQV 475
            T+YLP E I MLP EL+ +  SL        V  E+   L++   F   +   L   ++
Sbjct: 300 TTIYLPGEAIHMLPEELSSNLCSL--------VPNEDRFCLSVEMVFD--KSAKLKHYEI 349

Query: 476 MPSLIRRPWRLTYE 517
             S+I    RLTY+
Sbjct: 350 YESVINSKARLTYD 363

[183][TOP]
>UniRef100_Q9RED8 VacB protein n=1 Tax=Burkholderia sp. RepID=Q9RED8_BURSP
          Length = 822

 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 59/167 (35%), Positives = 77/167 (46%), Gaps = 6/167 (3%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADT 211
           P  FS E +  A  L  A   A   G    R DLRHL    +D     + DDA+  EA  
Sbjct: 319 PHQFSEEARAQAAQLPDAPAEADCRG----RVDLRHLPWLTIDGEDARDFDDAVYGEAVK 374

Query: 212 ------GRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDA 373
                  RL V IADVS ++KPG+ L T AL RS ++Y P   I MLP EL         
Sbjct: 375 LGRKRGFRLRVAIADVSYYVKPGDALDTAALERSTSVYFPRRVIPMLPPEL--------- 425

Query: 374 SNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
           SNG   ++ E +   AL     +   G++   Q  P++I    RL+Y
Sbjct: 426 SNGLCSLNPEVDR-CALVCDLVIDAQGAVHTCQCYPAMIHSVARLSY 471

[184][TOP]
>UniRef100_C9Q5P1 Ribonuclease R n=1 Tax=Vibrio sp. RC341 RepID=C9Q5P1_9VIBR
          Length = 821

 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  +  E+++   GL    P  ++ G    R DLR L    +D     + DDA+  
Sbjct: 237 THQIPHEWPAEVEQQVAGLGEEVPEEAKQG----RVDLRALPLVTIDGEDARDFDDAVYC 292

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           EA  G   RLWV IADVS +++P   L  EA+ R  ++Y P++ + MLP  L        
Sbjct: 293 EAKKGGGWRLWVAIADVSYYVRPDTALDKEAINRGNSVYFPSQVVPMLPEVL-------- 344

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    T++E G L   +   +++    RLTY
Sbjct: 345 -SNGLCSLNPQVDR-LCMVCEMTISETGKLSGYKHYEAVMNSHARLTY 390

[185][TOP]
>UniRef100_C3KZ51 Ribonuclease R n=2 Tax=Clostridium botulinum RepID=C3KZ51_CLOB6
          Length = 725

 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 3/164 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEA-- 205
           P  F P++Q  A+ +  A P          R DLR L    +D     ++DDA+S E   
Sbjct: 218 PEEFPPKVQSYADNISEAIPEEEYKR----REDLRDLTIVTIDGEDAKDLDDAISLEKLP 273

Query: 206 -DTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
                L VHIADVS ++K   PL  EAL+R+ ++YL    I MLP +L         SNG
Sbjct: 274 NGNYYLGVHIADVSHYVKEKNPLDKEALKRATSVYLIDRVIPMLPKKL---------SNG 324

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
              ++ + +  L LS    + + G + D +V+ S+I+   R+TY
Sbjct: 325 ICSLNPKIDR-LTLSCFMEIDKSGKVVDHRVVESIIKSTERMTY 367

[186][TOP]
>UniRef100_A8SP48 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC
           27759 RepID=A8SP48_9FIRM
          Length = 727

 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADT 211
           P  F  E+ ++    L+  P +      A RTDLRHL +  +D     ++DDA++     
Sbjct: 225 PVDFPDEVMDS----LAQIPDSVSTSEMAGRTDLRHLQTVTIDGEDAKDLDDAITLYEKD 280

Query: 212 G--RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGH 385
           G  +L VHIADV+ ++K   PL  EAL R  + YL    I MLP +L         SNG 
Sbjct: 281 GMYKLGVHIADVTHYVKENSPLDKEALNRGTSCYLVDRVIPMLPHKL---------SNGI 331

Query: 386 AHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
             ++E ++  LALS    + ++G +   ++  ++I    R++Y
Sbjct: 332 CSLNEGQDR-LALSCLMDIDKNGHIVGHKICETVINVDRRMSY 373

[187][TOP]
>UniRef100_C3QS19 Ribonuclease R n=2 Tax=Bacteroides RepID=C3QS19_9BACE
          Length = 718

 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           + F  P   P+  E A   + A   A E+   A R D R + ++ +D     + DDA+S 
Sbjct: 231 AEFGLPYVYPKAVETAADKIPAEISAEEI---AKREDFRKVTTFTIDPKDAKDFDDALSI 287

Query: 200 EADTGRLW---VHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
                 LW   VHIADV+ ++K G  +  EA +R+ ++YL   TI MLP  L     SL 
Sbjct: 288 RKLKDGLWEVGVHIADVTHYVKEGSIIDKEAEKRATSVYLVDRTIPMLPERLCNFICSL- 346

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                   +EE+   LA S  F + E G + D +++ ++I    R TYE
Sbjct: 347 ------RPNEEK---LAFSVIFDITEKGEVRDSRIVHTVINSDRRFTYE 386

[188][TOP]
>UniRef100_A6DIQ3 Exoribonuclease, VacB/RNB family protein n=1 Tax=Lentisphaera
           araneosa HTCC2155 RepID=A6DIQ3_9BACT
          Length = 668

 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
 Frame = +2

Query: 149 YAVDSASTFEVDDAMS---WEADTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTE 319
           +++D  ST +VDD +S    E D  ++ +HIADVSA++     L  EA  R+ ++YLPT 
Sbjct: 275 FSIDDESTSDVDDVLSVEYLENDLFKIGIHIADVSAYIAKASTLDLEAEHRATSIYLPTG 334

Query: 320 TITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRP 499
           T+ M P ELA    SL   +             ALS+  T+  DG L    +  SLI+  
Sbjct: 335 TVNMFPAELATHKASLLPGSPKP----------ALSYYATLTSDGELRSTHIERSLIQVS 384

Query: 500 WRLTY 514
            +L+Y
Sbjct: 385 EKLSY 389

[189][TOP]
>UniRef100_B7FT32 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
           RepID=B7FT32_PHATR
          Length = 813

 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 48/140 (34%), Positives = 64/140 (45%), Gaps = 9/140 (6%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWE-------ADTGRLWVHIADVSAWLKPGEPLTTE 280
           R DLR L  Y +D  ST E+DD +S E        +   +W+HIAD   W      L   
Sbjct: 305 RRDLRDLKVYTIDGESTTEIDDGLSIEIIRQPDGTERQAIWIHIADADRWAPRNSTLFHA 364

Query: 281 ALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSL 460
           A  R  +LYLP  +  M P +++ + +SL A               ALS    + EDGS+
Sbjct: 365 ARTRYTSLYLPRGSCPMFPPQVSDNVMSLIAGQD----------ACALSLRVMLNEDGSI 414

Query: 461 GDPQ--VMPSLIRRPWRLTY 514
                 V PSLI   +RLTY
Sbjct: 415 DASTLIVTPSLIHVDYRLTY 434

[190][TOP]
>UniRef100_UPI0001B4AF33 putative exoribonuclease n=1 Tax=Bacteroides fragilis 3_1_12
           RepID=UPI0001B4AF33
          Length = 714

 Score = 67.0 bits (162), Expect = 7e-10
 Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           + F  P   P+  E A   + A   A E+   A R D R + ++ +D     + DDA+S 
Sbjct: 228 AEFGLPYVYPQSVEKAADKIPAEISAEEI---ARREDFRKVTTFTIDPKDAKDFDDALSI 284

Query: 200 EADTGRLW---VHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
                 LW   VHIADV+ ++K G  +  EA +R+ ++YL   TI MLP  L     SL 
Sbjct: 285 RPLKNGLWEVGVHIADVTHYVKEGSIIDKEAEKRATSVYLVDRTIPMLPERLCNFICSL- 343

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                   +EE+   LA S  F + E G + D +++ ++I    R TYE
Sbjct: 344 ------RPNEEK---LAFSAIFDITEKGEVRDSRIVHTVIESDRRFTYE 383

[191][TOP]
>UniRef100_Q1J171 Ribonuclease R n=1 Tax=Deinococcus geothermalis DSM 11300
           RepID=Q1J171_DEIGD
          Length = 1182

 Score = 67.0 bits (162), Expect = 7e-10
 Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 3/162 (1%)
 Frame = +2

Query: 41  FSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEAD---T 211
           F  ++ E AN + +  P  S VG    R DLR  + + VD     + DDA+  +     T
Sbjct: 487 FPADVLEEANAIPTRIPPESLVG----RLDLREFNIFTVDGRDAKDFDDAIHIQPTPEGT 542

Query: 212 GRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAH 391
             + VHIADVS +++ G PL  EA  R+ ++YLP   + MLP  L+    SL        
Sbjct: 543 FVVGVHIADVSHYVREGTPLDQEAYARATSVYLPGRVLPMLPEHLSNGVCSLVP------ 596

Query: 392 VSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
             E+   V AL     ++ +G + D ++ PS+I    RLTY+
Sbjct: 597 -FEDRLTVTAL---IELSAEGDILDVKLAPSVINSKARLTYD 634

[192][TOP]
>UniRef100_Q0IAH9 Exoribonuclease, VacB/RNB family protein n=1 Tax=Synechococcus sp.
           CC9311 RepID=Q0IAH9_SYNS3
          Length = 645

 Score = 67.0 bits (162), Expect = 7e-10
 Identities = 51/162 (31%), Positives = 73/162 (45%), Gaps = 3/162 (1%)
 Frame = +2

Query: 41  FSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEA---DT 211
           FSP L E A  L+     ASE    + R DL H     +D   T ++DD ++ E     +
Sbjct: 222 FSPALLEEAERLVELN--ASECPGDSERIDLCHQRCVTIDDEDTRDIDDGIALERREDGS 279

Query: 212 GRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAH 391
            RLW+HIAD    ++    L  EA RR  +LYL    + M P  L+    SL A    A 
Sbjct: 280 QRLWIHIADPGRLIESDSALDLEARRRGSSLYLAKGNLPMFPESLSTGPFSLRARTRTA- 338

Query: 392 VSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                    A S    +  +G LGD  +  S ++  +RL+Y+
Sbjct: 339 ---------AWSIWAELTSEGELGDHGIHRSWVQPTYRLSYD 371

[193][TOP]
>UniRef100_Q04E22 Exoribonuclease R n=1 Tax=Oenococcus oeni PSU-1 RepID=Q04E22_OENOB
          Length = 726

 Score = 67.0 bits (162), Expect = 7e-10
 Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMS-WEADTGR--LWVHIADVSAWLKPGEPLTTEALRR 292
           R D R      +D A T ++DDA+  W+   G   L VHIADVS ++     L  EA +R
Sbjct: 207 RPDFRDQPLITIDGADTKDIDDAVVVWKLPNGNYHLGVHIADVSNYVPLKTSLDAEAYKR 266

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             ++YL    I MLP E+         SNG A ++  E+  LA+S    + ++G +   +
Sbjct: 267 GTSVYLTDRVIPMLPTEI---------SNGIASLNPNEDR-LAMSCEMEINQEGQVVKHK 316

Query: 473 VMPSLIRRPWRLTYE 517
           + PS+IR   R+TY+
Sbjct: 317 IQPSIIRSHARMTYD 331

[194][TOP]
>UniRef100_A4SIZ0 Ribonuclease R n=1 Tax=Aeromonas salmonicida subsp. salmonicida
           A449 RepID=A4SIZ0_AERS4
          Length = 797

 Score = 67.0 bits (162), Expect = 7e-10
 Identities = 45/117 (38%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P T+  E+ +   GL    P  ++ G    R DLR L    +D     + DDA+  
Sbjct: 231 THGIPHTWPEEVTKEVAGLGEQVPEKAKEG----RIDLRALPLVTIDGEDARDFDDAVFC 286

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGL 361
           EA  G   RLWV IADVSA++KPG  L  EA +R  ++Y P   + MLP E+  +GL
Sbjct: 287 EAKRGGGWRLWVAIADVSAYVKPGTALDAEAYQRGNSVYFPEFVVPMLP-EVLSNGL 342

[195][TOP]
>UniRef100_C3QA61 Ribonuclease R n=1 Tax=Bacteroides sp. D1 RepID=C3QA61_9BACE
          Length = 718

 Score = 67.0 bits (162), Expect = 7e-10
 Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           + F  P   P+  E A   + A   A E+   A R D R + ++ +D     + DDA+S 
Sbjct: 231 AEFGLPYVYPKAVETAADKIPAEISAEEI---AKREDFRKVTTFTIDPKDAKDFDDALSI 287

Query: 200 EADTGRLW---VHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
                 LW   VHIADV+ ++K G  +  EA +R+ ++YL   TI MLP  L     SL 
Sbjct: 288 RKLKDGLWEVGVHIADVTHYVKEGGIIDKEAEKRATSVYLVDRTIPMLPERLCNFICSL- 346

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                   +EE+   LA S  F + E G + D +++ ++I    R TYE
Sbjct: 347 ------RPNEEK---LAFSVIFDITEKGEIKDSRIVHTVINSDRRFTYE 386

[196][TOP]
>UniRef100_B9CW31 Ribonuclease R n=1 Tax=Actinobacillus minor 202 RepID=B9CW31_9PAST
          Length = 779

 Score = 67.0 bits (162), Expect = 7e-10
 Identities = 55/167 (32%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAM-- 193
           +H  P T+S  +++    L    P  ++ G    R DLR L    +D  S  + DDA+  
Sbjct: 229 NHDIPHTWSEGVEKQIRQLSEEVPEEAKQG----RVDLRDLPLVTIDGESARDFDDAVFA 284

Query: 194 SWEADTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDA 373
             E D  RLWV IADVS +++P   L  EA  R  ++Y PT  I MLP  L         
Sbjct: 285 QKEGDGWRLWVAIADVSYYVRPKTALDLEAANRGNSVYFPTRVIPMLPEIL--------- 335

Query: 374 SNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
           SNG   ++ + +  L L    TV+  G L   Q   +++    RLTY
Sbjct: 336 SNGLCSLNPQVDR-LCLVAEMTVSAQGELTGYQFYEAVMNSHARLTY 381

[197][TOP]
>UniRef100_B0MMH0 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM
           15702 RepID=B0MMH0_9FIRM
          Length = 713

 Score = 67.0 bits (162), Expect = 7e-10
 Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADT 211
           P  FS E    A   ++A     +   +A R DLR L  + +D A T ++DDA+S E   
Sbjct: 215 PVDFSEEALNQAKQYVNA---VIDEKQTAKRLDLRDLPIFTIDGADTKDIDDAISIERTE 271

Query: 212 G--RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           G  +L VHIADVS ++  G PL  +A  R  ++Y+  + I MLP EL+    SL+
Sbjct: 272 GGYKLGVHIADVSHYVTEGSPLDNDAFERGTSVYIADKVIPMLPKELSNGICSLN 326

[198][TOP]
>UniRef100_A0NJR2 Ribonuclease R n=1 Tax=Oenococcus oeni ATCC BAA-1163
           RepID=A0NJR2_OENOE
          Length = 726

 Score = 67.0 bits (162), Expect = 7e-10
 Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMS-WEADTGR--LWVHIADVSAWLKPGEPLTTEALRR 292
           R D R      +D A T ++DDA+  W+   G   L VHIADVS ++     L  EA +R
Sbjct: 207 RPDFRDQPLITIDGADTKDIDDAVVVWKLPNGNYHLGVHIADVSNYVPLKTSLDAEAYKR 266

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             ++YL    I MLP E+         SNG A ++  E+  LA+S    + ++G +   +
Sbjct: 267 GTSVYLTDRVIPMLPTEI---------SNGIASLNPNEDR-LAMSCEMEINQEGQVVKHK 316

Query: 473 VMPSLIRRPWRLTYE 517
           + PS+IR   R+TY+
Sbjct: 317 IQPSIIRSHARMTYD 331

[199][TOP]
>UniRef100_C1V752 Exoribonuclease R n=1 Tax=Halogeometricum borinquense DSM 11551
           RepID=C1V752_9EURY
          Length = 440

 Score = 67.0 bits (162), Expect = 7e-10
 Identities = 50/134 (37%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSW--EADTGRLWVHIADVSAWLKPGEPLTTEALRRS 295
           R DLR L ++  D     + DDA+S     +T  LWVHIADV+ ++ PG  +  EA++R 
Sbjct: 71  RQDLRDLTTWTTDPIDAQDFDDAISIAENEETYTLWVHIADVTHYVHPGSEMWEEAVKRG 130

Query: 296 CTLYLPTETITMLPLELARDGLSLDASNGH-AHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
            T+YLP  TI MLP  LA    SL  +    AH  E E     LSF           +  
Sbjct: 131 NTVYLPAYTIHMLPPILAETVCSLVPNEDRLAHTVEMEIDKETLSF----------EEID 180

Query: 473 VMPSLIRRPWRLTY 514
           +  S+I    RLTY
Sbjct: 181 IYKSVIESDERLTY 194

[200][TOP]
>UniRef100_B4F273 Ribonuclease R n=1 Tax=Proteus mirabilis HI4320 RepID=B4F273_PROMH
          Length = 829

 Score = 66.6 bits (161), Expect = 9e-10
 Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P T+ P++++    L    P +++ G    R DLR L    +D     + DDA+  
Sbjct: 230 THEIPHTWPPKVEKEIADLKEDVPESAKQG----RVDLRDLPLITIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           +   G   RLWV IADVS +++P   L TEA  R  ++Y P++ + MLP  L        
Sbjct: 286 QRKKGGGWRLWVAIADVSYYVRPQTALDTEARSRGNSVYFPSQVVPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+E G L   +   +++    R+TY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTVSEQGRLSSYKFYEAVMSSHARMTY 383

[201][TOP]
>UniRef100_C9L2E1 Ribonuclease R n=1 Tax=Bacteroides finegoldii DSM 17565
           RepID=C9L2E1_9BACE
          Length = 718

 Score = 66.6 bits (161), Expect = 9e-10
 Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 5/151 (3%)
 Frame = +2

Query: 80  SAGPLASEVGPS--ACRTDLRHLDSYAVDSASTFEVDDAMSWEADTGRLW---VHIADVS 244
           +A  + +E+ P   A R D R + ++ +D     + DDA+S  +    LW   VHIADV+
Sbjct: 246 AADKIPAEITPEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRSIKNGLWEVGVHIADVT 305

Query: 245 AWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLAL 424
            ++K G  +  EA +R+ ++YL   TI MLP  L     SL         +EE+   LA 
Sbjct: 306 HYVKEGGIIDKEAEKRATSVYLVDRTIPMLPERLCNFICSL-------RPNEEK---LAF 355

Query: 425 SFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
           S  F + E G + D ++  ++I    R TYE
Sbjct: 356 SVIFDITEKGEIKDSRIAHTVINSDRRFTYE 386

[202][TOP]
>UniRef100_C6I389 Ribonuclease R n=3 Tax=Bacteroides RepID=C6I389_9BACE
          Length = 714

 Score = 66.6 bits (161), Expect = 9e-10
 Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           + F  P   P+  E A   + A   A E+   A R D R + ++ +D     + DDA+S 
Sbjct: 228 AEFGLPYVYPQSVEKAADKIPAEISAEEI---ARREDFRKVTTFTIDPKDAKDFDDALSI 284

Query: 200 EADTGRLW---VHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
                 LW   VHIADV+ ++K G  +  EA +R+ ++YL   TI MLP  L     SL 
Sbjct: 285 RPLKDGLWEVGVHIADVTHYVKEGSIIDKEAEKRATSVYLVDRTIPMLPERLCNFICSL- 343

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                   +EE+   LA S  F + E G + D +++ ++I    R TYE
Sbjct: 344 ------RPNEEK---LAFSAIFDITEKGEVRDSRIVHTVIESDRRFTYE 383

[203][TOP]
>UniRef100_C4V602 Ribonuclease R n=1 Tax=Selenomonas flueggei ATCC 43531
           RepID=C4V602_9FIRM
          Length = 898

 Score = 66.6 bits (161), Expect = 9e-10
 Identities = 54/160 (33%), Positives = 81/160 (50%), Gaps = 2/160 (1%)
 Frame = +2

Query: 41  FSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAM-SWEAD-TG 214
           F P++ EAA       PL  E    A R D R      +D   T ++DD + ++E D   
Sbjct: 231 FPPDVAEAA-ARCPKDPLPEEY---AGRRDRRDFPIVTIDGEDTKDIDDGVYAYEKDGVF 286

Query: 215 RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHV 394
            L V+IADVS +++ GEPL  EA RR  ++YL    I MLP EL         SNG   +
Sbjct: 287 FLGVYIADVSHYVRAGEPLDREAARRGTSVYLVDRVIPMLPKEL---------SNGICSL 337

Query: 395 SEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
           +E  +  L+++    +  DG + + +++P +I    RLTY
Sbjct: 338 NEGVDR-LSMACEMEIGMDGEVRNYEIVPCVIHVARRLTY 376

[204][TOP]
>UniRef100_C3J9M7 Ribonuclease R n=2 Tax=Bacteria RepID=C3J9M7_9PORP
          Length = 736

 Score = 66.6 bits (161), Expect = 9e-10
 Identities = 54/170 (31%), Positives = 76/170 (44%), Gaps = 3/170 (1%)
 Frame = +2

Query: 17  ASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMS 196
           A +  P ++  E +EAA  + S  P        A R D R + +  +D A   + DDA+S
Sbjct: 248 AEYDLPYSYPEEAEEAARQIPSEIPSEE----MAKREDFREVFTLTIDPADAKDFDDALS 303

Query: 197 WEADTGRL---WVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSL 367
           W    G L    VHIADVS ++ PG  +  EA  R+ ++YL   TI MLP  L  D  SL
Sbjct: 304 WRKLEGGLVEVGVHIADVSYYVTPGSVIDKEAYDRATSIYLVDRTIPMLPERLCNDLCSL 363

Query: 368 DASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                         A LA S  F + E   +   ++  ++I    R  YE
Sbjct: 364 ----------RPNEARLAFSCVFVLNEAAEVQSYRIGRTIIESNRRYAYE 403

[205][TOP]
>UniRef100_C2LKJ2 Exoribonuclease R n=1 Tax=Proteus mirabilis ATCC 29906
           RepID=C2LKJ2_PROMI
          Length = 829

 Score = 66.6 bits (161), Expect = 9e-10
 Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P T+ P++++    L    P +++ G    R DLR L    +D     + DDA+  
Sbjct: 230 THEIPHTWPPKVEKEIADLKEDVPESAKQG----RVDLRDLPLITIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           +   G   RLWV IADVS +++P   L TEA  R  ++Y P++ + MLP  L        
Sbjct: 286 QRKKGGGWRLWVAIADVSYYVRPQTALDTEARSRGNSVYFPSQVVPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+E G L   +   +++    R+TY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTVSEQGRLSSYKFYEAVMSSHARMTY 383

[206][TOP]
>UniRef100_C1I4F4 Ribonuclease R n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I4F4_9CLOT
          Length = 745

 Score = 66.6 bits (161), Expect = 9e-10
 Identities = 49/136 (36%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
 Frame = +2

Query: 116 ACRTDLRHLDSYAVDSASTFEVDDAMSWEA-DTG--RLWVHIADVSAWLKPGEPLTTEAL 286
           A R DLR+L    +D     ++DDA+S E  D G  RL VHIADVS +++   PL  EAL
Sbjct: 243 ARRKDLRNLRMVTIDGEDAKDLDDAVSIERLDNGKFRLGVHIADVSHYVREKNPLDKEAL 302

Query: 287 RRSCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGD 466
           +R+ ++YL    I MLP +L         SNG   ++ + +  LALS    + ++G +  
Sbjct: 303 KRATSVYLIDRVIPMLPKKL---------SNGICSLNPKVDR-LALSCFMVIDKNGKVIQ 352

Query: 467 PQVMPSLIRRPWRLTY 514
            ++  S+I+   R+TY
Sbjct: 353 HEIEESVIKTSERMTY 368

[207][TOP]
>UniRef100_A3EPY9 Ribonuclease R n=1 Tax=Leptospirillum rubarum RepID=A3EPY9_9BACT
          Length = 744

 Score = 66.6 bits (161), Expect = 9e-10
 Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
 Frame = +2

Query: 104 VGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEAD---TGRLWVHIADVSAWLKPGEPLT 274
           V PS  R DLRHL+   +D     + DDA+S   +   T ++ +HIADV A++ PG  L 
Sbjct: 247 VEPSENRVDLRHLEIMTIDGDRARDFDDALSVVENPDGTFQIGIHIADVGAYVLPGSELD 306

Query: 275 TEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDG 454
            EA RR  ++Y P   + M P  L+   LSL+               LA +    ++  G
Sbjct: 307 KEAFRRGTSVYFPDRVVPMFPEVLSNGVLSLNPDEDR----------LARTVMVRMSPAG 356

Query: 455 SLGDPQVMPSLIRRPWRLTY 514
            + +  +  S+IR   R TY
Sbjct: 357 QVLESSIFRSVIRSRLRATY 376

[208][TOP]
>UniRef100_UPI0001826C89 hypothetical protein ENTCAN_00853 n=1 Tax=Enterobacter cancerogenus
           ATCC 35316 RepID=UPI0001826C89
          Length = 827

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  +   ++E    L    P  S+VG    R DLR L    +D     + DDA+  
Sbjct: 244 THEIPYVWPKAVEEQIENLREEVPEESKVG----RVDLRALPLVTIDGEDARDFDDAVYC 299

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++P  PL  EA  R  ++Y P++ + MLP  L        
Sbjct: 300 EKKRGGGWRLWVAIADVSYYVRPNTPLDNEARSRGTSVYFPSQVVPMLPEVL-------- 351

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    T++  G L   +   +++    RLTY
Sbjct: 352 -SNGLCSLNPQVDR-LCMVCEMTISTKGRLTGYKFYEAVMSSHARLTY 397

[209][TOP]
>UniRef100_Q7VN79 Ribonuclease r, virulence associated protein VacB-like protein n=1
           Tax=Haemophilus ducreyi RepID=Q7VN79_HAEDU
          Length = 785

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 48/133 (36%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAM--SWEADTGRLWVHIADVSAWLKPGEPLTTEALRRS 295
           R DLRHL    +D  S  + DDA+    E D  RLWV IADVS +++P   L  EA +R 
Sbjct: 260 RIDLRHLPLVTIDGESACDFDDAVFARKEGDQWRLWVAIADVSYYVRPKTALDLEAAKRG 319

Query: 296 CTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQV 475
            ++Y P   I MLP  L         SNG   ++ + +  L L    TV + G L   Q 
Sbjct: 320 NSVYFPKRVIPMLPEVL---------SNGLCSLNPQVDR-LCLVAEMTVCQSGELTRYQF 369

Query: 476 MPSLIRRPWRLTY 514
             +++    RLTY
Sbjct: 370 YEAVMNSHARLTY 382

[210][TOP]
>UniRef100_Q7VBX3 Exoribonuclease R/ribonuclease II n=1 Tax=Prochlorococcus marinus
           RepID=Q7VBX3_PROMA
          Length = 432

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 2/132 (1%)
 Frame = +2

Query: 128 DLRHLDSYAVDSASTFEVDDAMSWE--ADTGRLWVHIADVSAWLKPGEPLTTEALRRSCT 301
           D+ +L +Y +D  +T E+DDA+S E   D   LW+HIA+ +  +     L  EA+ RS T
Sbjct: 34  DITNLKTYTIDDPNTIEIDDAISLEKRGDKCFLWIHIANPAETISLNSALAQEAMIRSST 93

Query: 302 LYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMP 481
           +YL      M P EL R+ +SL        V  +E+  LA+S    +++ G +    +  
Sbjct: 94  IYLAESISYMFPKELIREKISL--------VQGKES--LAISLKLELSDKGDINSFSIER 143

Query: 482 SLIRRPWRLTYE 517
           + I+  ++L+YE
Sbjct: 144 TKIKPDYKLSYE 155

[211][TOP]
>UniRef100_Q30Y52 Ribonuclease R n=1 Tax=Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20 RepID=Q30Y52_DESDG
          Length = 869

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 54/170 (31%), Positives = 78/170 (45%), Gaps = 2/170 (1%)
 Frame = +2

Query: 11  LRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDA 190
           ++ +H  P  F  E+ + A  L    P        A R DLRH+D   +D A   + DDA
Sbjct: 224 VKLNHNVPTEFPQEVLDQAAAL----PDQPSEDDFAGRVDLRHVDFVTIDGAKARDFDDA 279

Query: 191 MSWEA--DTGRLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLS 364
           +  E   D  RLWV IADVS +++P   L  EAL R+ + Y P     M P  L      
Sbjct: 280 VYVEEQHDGWRLWVAIADVSHYVQPRTALDEEALTRANSYYFPQSVEPMFPEAL------ 333

Query: 365 LDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
              SNG   ++     +  ++  +  A DG+ G  +  P++I    RLTY
Sbjct: 334 ---SNGLCSLNPRVPRLAMVAEVYFYA-DGTPGKSRFYPAVIESKARLTY 379

[212][TOP]
>UniRef100_B7UQI8 Exoribonuclease R, RNase R n=1 Tax=Escherichia coli O127:H6 str.
           E2348/69 RepID=B7UQI8_ECO27
          Length = 813

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  +   +++   GL    P  ++VG    R DLR L    +D     + DDA+  
Sbjct: 230 THEIPYIWPQAVEQQVAGLKEEVPEEAKVG----RVDLRDLPLVTIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++P  PL  EA  R  ++Y P++ I MLP  L        
Sbjct: 286 EKKRGGGWRLWVAIADVSYYVRPPTPLDREARNRGTSVYFPSQVIPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+  G L   +   +++    RLTY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTVSSKGRLTGYKFYEAVMSSHARLTY 383

[213][TOP]
>UniRef100_A9KPF2 Ribonuclease R n=1 Tax=Clostridium phytofermentans ISDg
           RepID=A9KPF2_CLOPH
          Length = 716

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDA--MSWEADTGRLWVHIADVSAWLKPGEPLTTEALRRS 295
           R DLR+L +  +D     ++DDA  +S + D  +L VHIADVS ++    PL  EAL+R 
Sbjct: 250 RVDLRNLQTVTIDGEDAKDLDDAITLSKKGDIYQLGVHIADVSNYVTEDSPLDKEALKRG 309

Query: 296 CTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQV 475
            ++YL    I MLP +L+    SL+A +            LALS    + E G++   ++
Sbjct: 310 TSVYLVDRVIPMLPHKLSNGICSLNAGSDR----------LALSCMMEIDEKGNVVGHRI 359

Query: 476 MPSLIRRPWRLTY 514
             ++I    R+TY
Sbjct: 360 AETVINVDRRMTY 372

[214][TOP]
>UniRef100_A5EVE2 Ribonuclease R n=1 Tax=Dichelobacter nodosus VCS1703A
           RepID=A5EVE2_DICNV
          Length = 752

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
 Frame = +2

Query: 59  EAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWE--ADTGRLWVHI 232
           +A    +   P A +      R DLR+L    +D  S  + DDA+  E   +  RL+V I
Sbjct: 248 DAVRAQIEKMPDALQEADYVDRLDLRYLPMVTIDGISARDFDDALYAEKRGENYRLFVAI 307

Query: 233 ADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENA 412
           ADVS ++KP  PL  EA  R  ++Y P   + MLP +L+    SL     + HV      
Sbjct: 308 ADVSYYVKPDSPLDEEAYARGTSVYFPDRVVPMLPEKLSNGLCSL-----NPHVDR---- 358

Query: 413 VLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
            L L    T+   G + + +   ++I+   RLTYE
Sbjct: 359 -LCLVCELTITPSGQIKNSKFHQAVIQSHARLTYE 392

[215][TOP]
>UniRef100_C4URL8 Ribonuclease R n=1 Tax=Yersinia rohdei ATCC 43380
           RepID=C4URL8_YERRO
          Length = 848

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P T+ P++++    L    P  ++ G    R DLR+L    +D     + DDA+  
Sbjct: 230 THEIPHTWPPQVEKQVADLKEQVPEEAKKG----RVDLRNLPLVTIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++P   L  EA  R  ++Y P++ I MLP  L        
Sbjct: 286 EKKRGGGWRLWVAIADVSYYVRPRTALDDEARSRGTSVYFPSQVIPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    T++  G L   +   +++    RLTY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTISAQGKLSSYKFYEAVMSSHARLTY 383

[216][TOP]
>UniRef100_C4SDK2 Ribonuclease R n=1 Tax=Yersinia mollaretii ATCC 43969
           RepID=C4SDK2_YERMO
          Length = 878

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P T+ P++++    L    P  ++ G    R DLR+L    +D     + DDA+  
Sbjct: 253 THEIPHTWPPQVEKQVADLKEQVPEEAKKG----RVDLRNLPLVTIDGEDARDFDDAVYC 308

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++P   L  EA  R  ++Y P++ I MLP  L        
Sbjct: 309 EKKRGGGWRLWVAIADVSYYVRPRTALDDEARSRGNSVYFPSQVIPMLPEVL-------- 360

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    T++  G L   +   +++    RLTY
Sbjct: 361 -SNGLCSLNPQVDR-LCMVCEMTISAQGKLSSSKFYEAVMSSHARLTY 406

[217][TOP]
>UniRef100_B7MSJ7 Exoribonuclease R, RNase R n=3 Tax=Escherichia coli
           RepID=B7MSJ7_ECO81
          Length = 813

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  +   +++   GL    P  ++VG    R DLR L    +D     + DDA+  
Sbjct: 230 THEIPYIWPQAVEQQVAGLKEEVPEEAKVG----RVDLRDLPLVTIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++P  PL  EA  R  ++Y P++ I MLP  L        
Sbjct: 286 EKKRGGGWRLWVAIADVSYYVRPPTPLDREARNRGTSVYFPSQVIPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+  G L   +   +++    RLTY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTVSSKGRLTGYKFYEAVMSSHARLTY 383

[218][TOP]
>UniRef100_A1AJ84 Exoribonuclease R, RNase R n=6 Tax=Escherichia RepID=A1AJ84_ECOK1
          Length = 827

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  +   +++   GL    P  ++VG    R DLR L    +D     + DDA+  
Sbjct: 244 THEIPYIWPQAVEQQVAGLKEEVPEEAKVG----RVDLRDLPLVTIDGEDARDFDDAVYC 299

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++P  PL  EA  R  ++Y P++ I MLP  L        
Sbjct: 300 EKKRGGGWRLWVAIADVSYYVRPPTPLDREARNRGTSVYFPSQVIPMLPEVL-------- 351

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+  G L   +   +++    RLTY
Sbjct: 352 -SNGLCSLNPQVDR-LCMVCEMTVSSKGRLTGYKFYEAVMSSHARLTY 397

[219][TOP]
>UniRef100_B6W7V2 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis
           DSM 7454 RepID=B6W7V2_9FIRM
          Length = 700

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGR--LWVHIADVSAWLKPGEPLTTEALRRS 295
           R DLR L +  +D   + + DDA+S E D     L+VHIADVS ++K    +  EA +R 
Sbjct: 245 REDLRDLFTVTIDGRDSKDFDDAISIEKDNEDYILYVHIADVSHYVKEKSEIDKEAYQRG 304

Query: 296 CTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQV 475
            + YL    + MLP EL         SNG   ++  EN  L+LS    + + G + D ++
Sbjct: 305 NSTYLYNLVLPMLPEEL---------SNGICSLNPNENR-LSLSLKMKINDKGKVIDYKI 354

Query: 476 MPSLIRRPWRLTYE 517
             +LIR  +RL Y+
Sbjct: 355 YKALIRSNYRLVYD 368

[220][TOP]
>UniRef100_A3DBQ8 Ribonuclease R n=2 Tax=Clostridium thermocellum RepID=A3DBQ8_CLOTH
          Length = 757

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEA---DTGRLWVHIADVSAWLKPGEPLTTEALRR 292
           R DLR L    +D     ++DDA+S E       RL VHIADVS ++K G PL  EAL+R
Sbjct: 246 RRDLRDLTMVTIDGEDAKDLDDAVSIERLPNGNYRLGVHIADVSYYVKEGSPLDKEALKR 305

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             ++YL    I M P EL         SNG   ++ + +  LA +    + + G + D +
Sbjct: 306 GTSVYLVDRVIPMFPKEL---------SNGICSLNPKVDR-LAFTVMMEIDKSGRVVDHE 355

Query: 473 VMPSLIRRPWRLTY 514
           +  S+I    R+TY
Sbjct: 356 IFESVINVNERMTY 369

[221][TOP]
>UniRef100_A5ZEJ5 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC
           43185 RepID=A5ZEJ5_9BACE
          Length = 718

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           + F  P   P+  E A   + A   A E+   A R D R + ++ +D     + DDA+S 
Sbjct: 231 AEFGLPYVYPKSVETAADKIPAEISAEEI---AKREDFRKVTTFTIDPKDAKDFDDALSI 287

Query: 200 EADTGRLW---VHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
                 LW   VHIADV+ ++K G  +  EA +R+ ++YL   TI MLP  L     SL 
Sbjct: 288 RKLKEGLWEVGVHIADVTHYVKEGGIIDKEAEKRATSVYLVDRTIPMLPERLCNFICSL- 346

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
                   +EE+   LA S  F + E G + D +++ ++I    R TYE
Sbjct: 347 ------RPNEEK---LAFSVIFNITEKGEVKDSRIVHTVINSDRRFTYE 386

[222][TOP]
>UniRef100_Q4P7A2 Putative uncharacterized protein n=1 Tax=Ustilago maydis
            RepID=Q4P7A2_USTMA
          Length = 1921

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 45/132 (34%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
 Frame = +2

Query: 149  YAVDSASTFEVDDAMSWEADTG--RLWVH--IADVSAWLKPGEPLTTEALRRSCTLYLPT 316
            Y +D    FE+DD +S E  +G  + WVH  IAD +AW+KP + L   A RR  TLY P 
Sbjct: 1425 YVIDDQDAFELDDGISIETVSGTDQAWVHVHIADPTAWIKPDDELGQRAERRFQTLYFPE 1484

Query: 317  ETITMLPLELARDGLSLDASNGH----AHVSEEENAVLALSFGFTV-AEDGSLGDPQVMP 481
                MLP E  R G+ L A++           + +A   ++F   V    G + D +V P
Sbjct: 1485 ARWAMLPDEFVRSGIGLRAASSSGGTGTGTGADVDAQRVMTFSALVDLPSGLVQDTKVRP 1544

Query: 482  SLIRRPWRLTYE 517
            +LI      +Y+
Sbjct: 1545 ALIHNVETTSYD 1556

[223][TOP]
>UniRef100_Q8A378 Ribonuclease R n=1 Tax=Bacteroides thetaiotaomicron
           RepID=Q8A378_BACTN
          Length = 718

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 5/151 (3%)
 Frame = +2

Query: 80  SAGPLASEVGPS--ACRTDLRHLDSYAVDSASTFEVDDAMSWEADTGRLW---VHIADVS 244
           +A  + +E+ P   A R D R + ++ +D     + DDA+S       LW   VHIADV+
Sbjct: 246 AADKIPAEITPEEIARREDFRKVTTFTIDPKDAKDFDDALSIRPIKDGLWEVGVHIADVT 305

Query: 245 AWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLAL 424
            ++K G  +  EA +R+ ++YL   TI MLP  L     SL         +EE+   LA 
Sbjct: 306 HYVKEGGIIDKEAEKRATSVYLVDRTIPMLPERLCNFICSL-------RPNEEK---LAF 355

Query: 425 SFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
           S  F + E G + D +++ ++I    R TYE
Sbjct: 356 SVIFDITEKGEVRDSRIVHTVINSDRRFTYE 386

[224][TOP]
>UniRef100_Q1LSR0 Ribonuclease R n=1 Tax=Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata) RepID=Q1LSR0_BAUCH
          Length = 749

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 2/167 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           S+  P  + PE++E A       P   +      R DLR L    +D     + DDA+  
Sbjct: 232 SYALPYIWPPEVEEQAATFTKEVPEVVK----RSRVDLRMLPLVTIDGEEARDFDDAVYC 287

Query: 200 EADTG--RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDA 373
           E  +   RLWV IADVS +++P  PL  EA  R+ ++Y P++ I MLP  L+    SL+ 
Sbjct: 288 EKKSSGWRLWVAIADVSYYVRPHTPLDNEARNRATSIYFPSQVIPMLPEILSHSLCSLNP 347

Query: 374 SNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
                         L +    T++  G L   +   ++I    RLTY
Sbjct: 348 QVDR----------LCMVCEMTISAQGKLSSYKFYEAIINSKARLTY 384

[225][TOP]
>UniRef100_B5FRN5 Ribonuclease R n=1 Tax=Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853 RepID=B5FRN5_SALDC
          Length = 812

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  +   +++   GL    P  ++VG    R DLR L    +D     + DDA+  
Sbjct: 230 THEIPYIWPQAVEQQVTGLKEEVPEEAKVG----RVDLRDLPLVTIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++P  PL  EA  R  ++Y P++ + MLP  L        
Sbjct: 286 EKKRGGGWRLWVAIADVSYYVRPPTPLDREARNRGTSVYFPSQVVPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    T++  G L   +   +++    RLTY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTISAKGRLTGYKFYEAVMSSHARLTY 383

[226][TOP]
>UniRef100_B2VCW6 Ribonuclease R n=1 Tax=Erwinia tasmaniensis RepID=B2VCW6_ERWT9
          Length = 827

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 49/146 (33%), Positives = 72/146 (49%), Gaps = 5/146 (3%)
 Frame = +2

Query: 92  LASEVGPSACR--TDLRHLDSYAVDSASTFEVDDAMSWEADTG---RLWVHIADVSAWLK 256
           L+ EV   A R   DLR L    +D     + DDA+  E   G   RLWV IADVS +++
Sbjct: 262 LSEEVPEEATRGRVDLRDLPLVTIDGEDARDFDDAVFCERKRGGGWRLWVAIADVSYYVR 321

Query: 257 PGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGF 436
           PG PL  EA+ R  ++Y P++ + MLP  L         SNG   ++ E +  L +    
Sbjct: 322 PGTPLDDEAINRGTSVYFPSQVVPMLPEVL---------SNGLCSLNPEVDR-LCMVCEM 371

Query: 437 TVAEDGSLGDPQVMPSLIRRPWRLTY 514
           T++  G L   +   +++    RLTY
Sbjct: 372 TISATGKLTGYKHYEAVMNSFARLTY 397

[227][TOP]
>UniRef100_B2UY13 Ribonuclease R n=1 Tax=Clostridium botulinum E3 str. Alaska E43
           RepID=B2UY13_CLOBA
          Length = 746

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEA-DTG--RLWVHIADVSAWLKPGEPLTTEALRR 292
           R DLR+L    +D     ++DDA+S E  D G  +L VHIADV+ +++    L  EAL+R
Sbjct: 252 RVDLRNLRMVTIDGEDAKDLDDAVSIEKLDDGNFKLGVHIADVTHYVRENNILDKEALKR 311

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
           + ++YL    I MLP +L         SNG   ++ + +  LALS    +   G++ D +
Sbjct: 312 ATSVYLIDRVIPMLPKQL---------SNGICSLNPKVDR-LALSCFMVINNKGTVVDHE 361

Query: 473 VMPSLIRRPWRLTY 514
           +M S+I+   R+TY
Sbjct: 362 IMESVIKTSERMTY 375

[228][TOP]
>UniRef100_B1XXK0 Ribonuclease R n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXK0_LEPCP
          Length = 733

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 57/169 (33%), Positives = 77/169 (45%), Gaps = 8/169 (4%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSAC--RTDLRHLDSYAVDSASTFEVDDAMSWE- 202
           P  FSPE       L   G L   V  + C  R DLR +    +D     + DDA+  E 
Sbjct: 153 PHRFSPET------LAQTGKLPDRVRAADCKGRIDLRDVPLVTIDGEDARDFDDAVYCEP 206

Query: 203 ADTGR-----LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSL 367
           A  GR     L V IADVS ++KPGEPL  +A  R+ ++Y P   I MLP +L       
Sbjct: 207 AKVGRTKGWRLLVAIADVSHYVKPGEPLDDDAYERATSVYFPRRVIPMLPEKL------- 259

Query: 368 DASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
             SNG   ++ +E   L++     V   G +   Q  P++I    R TY
Sbjct: 260 --SNGLCSLNPDEER-LSMVCDMLVNASGEVHAYQFYPAVILSHARFTY 305

[229][TOP]
>UniRef100_A3D8Q9 RNAse R n=1 Tax=Shewanella baltica OS155 RepID=A3D8Q9_SHEB5
          Length = 807

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 3/164 (1%)
 Frame = +2

Query: 32  PPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADT 211
           P T+SP +++    +      A +VG    R DLRHL    +D     + DDA+  E   
Sbjct: 234 PHTWSPVIEKKLRRIPDEVTDADKVG----RVDLRHLPLVTIDGEDARDFDDAVYAEKKA 289

Query: 212 G---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNG 382
           G   RLWV IADVS +++    L  EA  R  ++Y P++ I MLP +++    SL     
Sbjct: 290 GGGWRLWVAIADVSYYVRTDSALDIEARARGNSVYFPSQVIPMLPEKISNGLCSL----- 344

Query: 383 HAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
           + HV       L +    TV+  G L   +  P+++    R TY
Sbjct: 345 NPHVDR-----LCMVAEMTVSAKGKLSGYKFYPAVMYSHARFTY 383

[230][TOP]
>UniRef100_C9QCX5 Ribonuclease R n=1 Tax=Vibrio orientalis CIP 102891
           RepID=C9QCX5_VIBOR
          Length = 819

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  +   + +   GL    P  ++VG    R DLR L    +D     + DDA+  
Sbjct: 237 THQIPHEWPEAVDKQIEGLGEEVPEEAKVG----RVDLRDLPLVTIDGEDARDFDDAVYC 292

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++P   L  EA+ R  ++Y P++ + MLP  L        
Sbjct: 293 EKKKGGGWRLWVAIADVSYYVRPDSALDKEAINRGNSVYFPSQVVPMLPEVL-------- 344

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+E G L   +   +++    RLTY
Sbjct: 345 -SNGLCSLNPQVDR-LCMVCEMTVSETGKLSGYKHYEAVMNSHARLTY 390

[231][TOP]
>UniRef100_C9P040 Ribonuclease R n=1 Tax=Vibrio coralliilyticus ATCC BAA-450
           RepID=C9P040_9VIBR
          Length = 821

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  +  E+ +   GL    P  ++ G    R DLR L    +D     + DDA+  
Sbjct: 237 THQIPHEWPEEVDKQIEGLGEEVPEEAKQG----RVDLRELPLVTIDGEDARDFDDAVYC 292

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           EA      RLWV IADVS +++P   L  EA+ R  ++Y P++ + MLP  L        
Sbjct: 293 EAKKSGGWRLWVAIADVSYYVRPDSALDKEAINRGNSVYFPSQVVPMLPEVL-------- 344

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    T++E G L   +   +++    RLTY
Sbjct: 345 -SNGLCSLNPQVDR-LCMVCEMTISESGKLSGYKHYEAVMNSHARLTY 390

[232][TOP]
>UniRef100_C7HU91 Ribonuclease R n=1 Tax=Anaerococcus vaginalis ATCC 51170
           RepID=C7HU91_9FIRM
          Length = 706

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGR--LWVHIADVSAWLKPGEPLTTEALRRS 295
           R DLR L +  +D   + + DDA+S E D     L+VHIADVS ++K    +  EA +R 
Sbjct: 245 RKDLRDLFTVTIDGRDSKDFDDAISIEKDEEDFILYVHIADVSHYVKENSEIDKEAYQRG 304

Query: 296 CTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQV 475
            + YL    + MLP EL         SNG   ++  EN  LALS    + + G + D ++
Sbjct: 305 NSTYLYNIVLPMLPEEL---------SNGICSLNPNENR-LALSLKMRINKLGKVVDYKI 354

Query: 476 MPSLIRRPWRLTYE 517
             S+I+  +RL Y+
Sbjct: 355 YKSIIKSNYRLVYD 368

[233][TOP]
>UniRef100_C6IHK3 Ribonuclease R n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IHK3_9BACE
          Length = 718

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 5/151 (3%)
 Frame = +2

Query: 80  SAGPLASEVGPS--ACRTDLRHLDSYAVDSASTFEVDDAMSWEADTGRLW---VHIADVS 244
           +A  + +E+ P   A R D R + ++ +D     + DDA+S       LW   VHIADV+
Sbjct: 246 AADKIPAEITPEEIARREDFRKVTTFTIDPKDAKDFDDALSIRPIKDGLWEVGVHIADVT 305

Query: 245 AWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLAL 424
            ++K G  +  EA +R+ ++YL   TI MLP  L     SL         +EE+   LA 
Sbjct: 306 HYVKEGGIIDKEAEKRATSVYLVDRTIPMLPERLCNFICSL-------RPNEEK---LAF 355

Query: 425 SFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
           S  F + E G + D +++ ++I    R TYE
Sbjct: 356 SVIFDITEKGEVKDSRIVHTVINSDRRFTYE 386

[234][TOP]
>UniRef100_C5UY77 Ribonuclease R n=1 Tax=Clostridium botulinum E1 str. 'BoNT E
           Beluga' RepID=C5UY77_CLOBO
          Length = 746

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEA-DTG--RLWVHIADVSAWLKPGEPLTTEALRR 292
           R DLR+L    +D     ++DDA+S E  D G  +L VHIADV+ +++    L  EAL+R
Sbjct: 252 RVDLRNLRMVTIDGEDAKDLDDAVSIEKLDDGSFKLGVHIADVTHYVRENNILDKEALKR 311

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
           + ++YL    I MLP +L         SNG   ++ + +  LALS    +   G++ D +
Sbjct: 312 ATSVYLIDRVIPMLPKQL---------SNGICSLNPKVDR-LALSCFMVINNKGTVVDHE 361

Query: 473 VMPSLIRRPWRLTY 514
           +M S+I+   R+TY
Sbjct: 362 IMESVIKTSERMTY 375

[235][TOP]
>UniRef100_C4U5E8 Ribonuclease R n=1 Tax=Yersinia aldovae ATCC 35236
           RepID=C4U5E8_YERAL
          Length = 850

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P T+ P++++    L    P  ++ G    R DLR+L    +D     + DDA+  
Sbjct: 230 THEIPHTWPPQVEKQVADLKEQVPEEAKKG----RVDLRNLPLVTIDGEDARDFDDAVHC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++P   L  EA  R  ++Y P++ + MLP  L        
Sbjct: 286 EKKRGGGWRLWVAIADVSYYVRPRTALDDEARSRGNSVYFPSQVVPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    T++  G L   +   +++    RLTY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTISSQGKLSSYKFYEAVMSSHARLTY 383

[236][TOP]
>UniRef100_C4T7W1 Ribonuclease R n=1 Tax=Yersinia intermedia ATCC 29909
           RepID=C4T7W1_YERIN
          Length = 824

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P T+ P++++    L    P  ++ G    R DLR+L    +D     + DDA+  
Sbjct: 206 THEIPHTWPPQVEKQVADLKEQVPEEAKKG----RVDLRNLPLVTIDGEDARDFDDAVYC 261

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++P   L  EA  R  ++Y P++ + MLP  L        
Sbjct: 262 EKKRGGGWRLWVAIADVSYYVRPRTALDDEARNRGNSVYFPSQVVPMLPEVL-------- 313

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    T++  G L   +   +++    RLTY
Sbjct: 314 -SNGLCSLNPQVDR-LCMVCEMTISSQGKLSSYKFYEAVMSSHARLTY 359

[237][TOP]
>UniRef100_C0GFC0 Ribonuclease R n=1 Tax=Dethiobacter alkaliphilus AHT 1
           RepID=C0GFC0_9FIRM
          Length = 709

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 48/135 (35%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSW-EADTGR--LWVHIADVSAWLKPGEPLTTEALRR 292
           R DLR L    +D A   ++DDA+S  + D G   L VHIADV  ++K G  L  EA  R
Sbjct: 245 RMDLRDLPMVTIDGADAKDLDDAVSLHQKDNGNWELGVHIADVGHYVKEGTALDKEAFHR 304

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             ++YL    I MLP EL+ D  SL+               LA+S    +   G +    
Sbjct: 305 GTSIYLVDRVIPMLPPELSNDLCSLNPQVDR----------LAMSVFMELNHQGKVVSHD 354

Query: 473 VMPSLIRRPWRLTYE 517
             PS+IR   R+TY+
Sbjct: 355 FGPSVIRTQERMTYD 369

[238][TOP]
>UniRef100_C0FBQ4 Putative uncharacterized protein n=1 Tax=Clostridium sp. M62/1
           RepID=C0FBQ4_9CLOT
          Length = 757

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWE--ADTGRLWVHIADVSAWLKPGEPLTTEALRRS 295
           R DLR L +  +D     ++DDA+S E   D  RL VHIADVS +++    L  EALRRS
Sbjct: 296 RKDLRGLLTVTIDGEEAKDLDDAISIERAGDGYRLGVHIADVSHYVREYTALDAEALRRS 355

Query: 296 CTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQV 475
            ++YL    I MLP  L         SNG   ++E E+  L LS    +   G++   ++
Sbjct: 356 TSVYLVDRVIPMLPHRL---------SNGICSLNEGEDR-LTLSCLMDIDSQGNVVGHEI 405

Query: 476 MPSLIRRPWRLTY 514
             ++IR   R+TY
Sbjct: 406 AETVIRSDRRMTY 418

[239][TOP]
>UniRef100_B1EH98 Ribonuclease R n=1 Tax=Escherichia albertii TW07627
           RepID=B1EH98_9ESCH
          Length = 813

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  +   +++   GL    P  ++ G    R DLR L    +D     + DDA+  
Sbjct: 230 THEIPHIWPQAVEQQVTGLKEEVPEEAKAG----RVDLRDLPLVTIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++P  PL  EA  R  ++Y P++ I MLP  L        
Sbjct: 286 EKKRGGGWRLWVAIADVSYYVRPPTPLDREARNRGTSVYFPSQVIPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+  G L   +   +++    RLTY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTVSSKGRLTGYKFYEAVMSSHARLTY 383

[240][TOP]
>UniRef100_A8RRW9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
           BAA-613 RepID=A8RRW9_9CLOT
          Length = 748

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 7/160 (4%)
 Frame = +2

Query: 56  QEAANGLLSAGPLASEV---GPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADTGR--- 217
           +E  +G    G L S     G  A R DLR L +  +D     ++DDA++     G+   
Sbjct: 251 EETWDGPYGIGDLTSPADWTGDLAGRLDLRGLRTVTIDGEDAKDLDDAVTL-CRNGQGGY 309

Query: 218 -LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHV 394
            L VHIADVS ++K G PL  EAL+R  ++YL    I MLP +L+    SL+A       
Sbjct: 310 ILGVHIADVSHYVKEGRPLDKEALKRGTSVYLVDRVIPMLPHKLSNGICSLNAGTDR--- 366

Query: 395 SEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
                  LALS    + + G++ D ++  ++I    R+TY
Sbjct: 367 -------LALSCIMELDDQGNVLDHKIAETVIHVDRRMTY 399

[241][TOP]
>UniRef100_Q7UFR0 Ribonuclease R n=1 Tax=Rhodopirellula baltica RepID=Q7UFR0_RHOBA
          Length = 764

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
 Frame = +2

Query: 2   SLELRASHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEV 181
           +L +   +  P  FS ++ + A     A     +V P+  R DL  + +  +D     + 
Sbjct: 234 TLTIMRQYALPDEFSEDVLDEARE--QADAFDDDVVPTD-RKDLTDMLTITIDPFDARDF 290

Query: 182 DDAMSWEADTGR--LWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARD 355
           DDA+S + + GR  LWVHIADVS ++ PG  L  EA RR  ++YLP   I M+P      
Sbjct: 291 DDAISLQREDGRWRLWVHIADVSHFVPPGGKLDVEARRRGTSVYLPDRVIPMIP------ 344

Query: 356 GLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
               +  + H    + E   L  +    + +D ++   +V  + IR   R  YE
Sbjct: 345 ----EIISNHLASLQPERMRLVKTVEIEMLDDLTITHSEVHNAAIRSDKRFNYE 394

[242][TOP]
>UniRef100_Q253K0 Ribonuclease R n=1 Tax=Chlamydophila felis Fe/C-56
           RepID=Q253K0_CHLFF
          Length = 676

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTGR---LWVHIADVSAWLKPGEPLTTEALRR 292
           R DLR L  + +DS +  + DDA+S   D      L VHIADVS ++ P   L  EA +R
Sbjct: 206 RKDLRDLLCFTIDSITAKDFDDAVSLTYDHNDNYILGVHIADVSHYVTPHSALDQEASKR 265

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             ++Y P + I MLP  L+ +  SL  +             LA+S   T  + G L + +
Sbjct: 266 CNSIYFPGKVIPMLPPALSDNLCSLKPNVDR----------LAVSVFMTFTKSGHLSNYE 315

Query: 473 VMPSLIRRPWRLTYE 517
           +  S+IR  +R+TY+
Sbjct: 316 IFRSVIRSKYRMTYD 330

[243][TOP]
>UniRef100_C4K3C1 RNase R, 3'-5' exoribonuclease n=1 Tax=Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum) RepID=C4K3C1_HAMD5
          Length = 782

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  +S E+++    L    P  ++ G    R DLR L    +D     + DDA+  
Sbjct: 230 THEIPYLWSDEIKKEIGQLKEEVPEEAKQG----RVDLRALPLMTIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++P   L  EA  RS ++Y P++ I MLP  L+    SL+
Sbjct: 286 EKKRGGGWRLWVAIADVSYYVRPNTALDDEAKNRSNSVYFPSQVIPMLPEILSNGLCSLN 345

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            S             L++    T++  G L   +   + I+   RLTY
Sbjct: 346 PSVDR----------LSMVCEMTLSAQGKLSSYRFYEATIKSHARLTY 383

[244][TOP]
>UniRef100_Q3RAQ3 3'-5' exoribonuclease, VacB and RNase II n=1 Tax=Xylella fastidiosa
           subsp. sandyi Ann-1 RepID=Q3RAQ3_XYLFA
          Length = 836

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 45/117 (38%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
 Frame = +2

Query: 23  HFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWE 202
           H  P  F  E+ +AA    +A PL    G    R DLR L    +D     + DDA+  E
Sbjct: 318 HQLPHVFPQEVLDAA----AAVPLTVTPGMLGGRVDLRALPLVTIDGEDAKDFDDAVYCE 373

Query: 203 ADTG--RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSL 367
           ++ G  RL V IADVS +++PG PL  EAL R+ ++Y P   + MLP  L+    SL
Sbjct: 374 SNRGGVRLVVAIADVSHYVRPGTPLDEEALTRATSVYFPGFVVPMLPETLSNGICSL 430

[245][TOP]
>UniRef100_D0FNU4 Ribonuclease R n=1 Tax=Erwinia pyrifoliae RepID=D0FNU4_ERWPY
          Length = 813

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
 Frame = +2

Query: 122 RTDLRHLDSYAVDSASTFEVDDAMSWEADTG---RLWVHIADVSAWLKPGEPLTTEALRR 292
           R DLR L    +D     + DDA+  E   G   RLWV IADVS +++PG PL  EA+ R
Sbjct: 260 RVDLRDLPLVTIDGEDARDFDDAVFCERKRGGGWRLWVAIADVSYYVRPGTPLDDEAVNR 319

Query: 293 SCTLYLPTETITMLPLELARDGLSLDASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQ 472
             ++Y P++ + MLP  L         SNG   ++ E +  L +    T++  G L   +
Sbjct: 320 GTSVYFPSQVVPMLPEVL---------SNGLCSLNPEVDR-LCMVCEMTISSTGKLTGYK 369

Query: 473 VMPSLIRRPWRLTY 514
              +++    RLTY
Sbjct: 370 HYEAVMNSFARLTY 383

[246][TOP]
>UniRef100_C9QTP6 VacB and RNase II family 3'-5' exoribonuclease n=1 Tax=Escherichia
           coli DH1 RepID=C9QTP6_ECOLX
          Length = 813

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  +   +++   GL    P  ++ G    R DLR L    +D     + DDA+  
Sbjct: 230 THEIPYIWPQAVEQQVAGLKEEVPEEAKAG----RVDLRDLPLVTIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++P  PL  EA  R  ++Y P++ I MLP  L        
Sbjct: 286 EKKRGGGWRLWVAIADVSYYVRPSTPLDREARNRGTSVYFPSQVIPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+  G L   +   +++    RLTY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTVSSKGRLTGYKFYEAVMSSHARLTY 383

[247][TOP]
>UniRef100_C7RM85 Ribonuclease R n=1 Tax=Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1 RepID=C7RM85_9PROT
          Length = 723

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 53/159 (33%), Positives = 76/159 (47%), Gaps = 3/159 (1%)
 Frame = +2

Query: 50  ELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSWEADTGRLW-- 223
           E   AA    +A P       S  RTDLR L    +D  +  + DDA+  E  TGR W  
Sbjct: 244 EFSSAALAEAAALPDGLTSSESEGRTDLRALPLVTIDGETARDFDDAVFAEK-TGRGWRL 302

Query: 224 -VHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLDASNGHAHVSE 400
            V IADVS +++PG  L  E L+R  ++Y P   I MLP +L         SNG   ++ 
Sbjct: 303 VVAIADVSHYVRPGMALDREGLQRGNSVYFPRRVIPMLPEKL---------SNGLCSLNP 353

Query: 401 EENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTYE 517
           + +  LA+     +   G + D +  P++ R   RLTY+
Sbjct: 354 DVDR-LAMVCDMNIDAGGEIVDYRFYPAVFRSQARLTYD 391

[248][TOP]
>UniRef100_C4SLD1 Ribonuclease R n=1 Tax=Yersinia frederiksenii ATCC 33641
           RepID=C4SLD1_YERFR
          Length = 505

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P T+ P++++    L    P  ++ G    R DLR+L    +D     + DDA+  
Sbjct: 230 THEIPHTWPPQVEKQVADLKEQVPEEAKKG----RVDLRNLPLVTIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++P   L  EA  R  ++Y P++ + MLP  L        
Sbjct: 286 EKKRGGGWRLWVAIADVSYYVRPRTALDDEARSRGNSVYFPSQVVPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    T++  G L   +   +++    RLTY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTISSQGKLSSYKFYEAVMSSHARLTY 383

[249][TOP]
>UniRef100_C4S6W6 Ribonuclease R n=1 Tax=Yersinia bercovieri ATCC 43970
           RepID=C4S6W6_YERBE
          Length = 854

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P T+ P++++    L    P  ++ G    R DLR+L    +D     + DDA+  
Sbjct: 230 THEIPHTWPPQVEKQVADLKEQVPEEAKKG----RVDLRNLPLVTIDGEDARDFDDAVYC 285

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++P   L  EA  R  ++Y P++ + MLP  L        
Sbjct: 286 EKKRGGGWRLWVAIADVSYYVRPRTALDDEARSRGNSVYFPSQVVPMLPEVL-------- 337

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    T++  G L   +   +++    RLTY
Sbjct: 338 -SNGLCSLNPQVDR-LCMVCEMTISSQGKLSSYKFYEAVMSSHARLTY 383

[250][TOP]
>UniRef100_C1NB72 VacB n=1 Tax=Escherichia sp. 1_1_43 RepID=C1NB72_9ESCH
          Length = 800

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 3/168 (1%)
 Frame = +2

Query: 20  SHFYPPTFSPELQEAANGLLSAGPLASEVGPSACRTDLRHLDSYAVDSASTFEVDDAMSW 199
           +H  P  +   +++   GL    P  ++ G    R DLR L    +D     + DDA+  
Sbjct: 244 THEIPYIWPQAVEQQVAGLKEEVPEEAKAG----RVDLRDLPLVTIDGEDARDFDDAVYC 299

Query: 200 EADTG---RLWVHIADVSAWLKPGEPLTTEALRRSCTLYLPTETITMLPLELARDGLSLD 370
           E   G   RLWV IADVS +++P  PL  EA  R  ++Y P++ I MLP  L        
Sbjct: 300 EKKRGGGWRLWVAIADVSYYVRPSTPLDREARNRGTSVYFPSQVIPMLPEVL-------- 351

Query: 371 ASNGHAHVSEEENAVLALSFGFTVAEDGSLGDPQVMPSLIRRPWRLTY 514
            SNG   ++ + +  L +    TV+  G L   +   +++    RLTY
Sbjct: 352 -SNGLCSLNPQVDR-LCMVCEMTVSSKGRLTGYKFYEAVMSSHARLTY 397