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[1][TOP] >UniRef100_C1AWM5 Putative uncharacterized protein n=1 Tax=Rhodococcus opacus B4 RepID=C1AWM5_RHOOB Length = 615 Score = 59.7 bits (143), Expect = 1e-07 Identities = 54/166 (32%), Positives = 73/166 (43%), Gaps = 21/166 (12%) Frame = +3 Query: 72 ACTAAARRA--AAAERRRRRAYAVSAKPPLLPRPSSRPGLGVVPSVGS-------ASAPP 224 A AA R A AAA R V P P++ P + VP+VGS A+ PP Sbjct: 345 ALLAADRDAGHAAAPTVARMPVVVPTAAPATAAPAAAPAVPAVPAVGSDADTVVLAARPP 404 Query: 225 APPPAAPDVAG-----SAGVVDLARSGLAAAEGGGVDSAAV--SMCSGSSGSDREEDGGT 383 AP P P G AG++ + + +A GG+ V + SSGS + GT Sbjct: 405 APRPVDPGPTGMSRKKKAGIITASAAAIALLAAGGLSLGTVFDVAPASSSGSTTSQSSGT 464 Query: 384 VAARAGAVTGVASGAPSAG---PSLDAARVLDAVRAP--AVGITRP 506 A A + +GV + A + G P +AA V DA P A G+ P Sbjct: 465 SAGSA-STSGVPAEAAATGAVAPGTEAAGVADATGVPGTAAGVATP 509 [2][TOP] >UniRef100_Q9RKR9 Putative multi-domain regulatory protein n=1 Tax=Streptomyces coelicolor RepID=Q9RKR9_STRCO Length = 1334 Score = 59.3 bits (142), Expect = 2e-07 Identities = 44/137 (32%), Positives = 60/137 (43%), Gaps = 14/137 (10%) Frame = -1 Query: 493 PTAGARTASRTRAASRDGPAEGA-PEATPVTAPALAA-----------TVPPSSSRSDPL 350 P +GA AS T AS G A G P + P + PA+A P ++ S Sbjct: 271 PASGAGAASGTDVASGAGAASGPDPASGPASGPAVAPGSGGGPAPGWWPAPGTAPGSSTA 330 Query: 349 LPLHMLTAAESTPPPSAAARPDRARSTTPAEPA--TSGAAGGGAGGADADPTDGTTPRPG 176 P +AA++ P P + P A + A PA T+G A G + P GTTP PG Sbjct: 331 PPHDTASAADTAPAPGPTSAPGTAPAAGTAAPAPGTAGPAPGTSYAPGTAPVAGTTPAPG 390 Query: 175 RDDGRGRSGGLAETAYA 125 G +G +T+YA Sbjct: 391 TAPAPGTAGPARDTSYA 407 [3][TOP] >UniRef100_Q2J728 Translation initiation factor IF-2 n=1 Tax=Frankia sp. CcI3 RepID=IF2_FRASC Length = 1062 Score = 57.0 bits (136), Expect = 8e-07 Identities = 43/120 (35%), Positives = 49/120 (40%), Gaps = 3/120 (2%) Frame = -1 Query: 493 PTAGARTASRTRAASRDGPAEGAPEATPVTAPALAATVPPSSSRSDPLLPLHMLTAAEST 314 PTAG TA R R GP AP P T P+ A P + R +A +S Sbjct: 207 PTAGGPTAGGPRPGPRPGPRSAAPGNNPYTTPS-AGPRPSAGPRP---------SAGQSG 256 Query: 313 PPPSAAARPDRARSTT--PAEPATSGAAGGGAGGADADPT-DGTTPRPGRDDGRGRSGGL 143 PP + RP RS T P P G GG G PT G PRPG G GG+ Sbjct: 257 PPSTPTPRPSAPRSGTPRPGTPRPGGPRPGGTGAGGPRPTPGGMPPRPG-GPRSGAGGGM 315 [4][TOP] >UniRef100_O13028 Antifreeze glycopeptide AFGP polyprotein n=1 Tax=Boreogadus saida RepID=O13028_BORSA Length = 507 Score = 56.6 bits (135), Expect = 1e-06 Identities = 57/169 (33%), Positives = 73/169 (43%), Gaps = 7/169 (4%) Frame = -1 Query: 493 PTAGARTASRTRAASRDGPAEGAPEATPVTAP--ALAATVPPSSSRSDPLLPLHMLTAAE 320 P A AR A+ AA+ PA A AT TA A AAT ++ + P T A Sbjct: 28 PAAAARAATPATAAT---PATAATPATAATAATEATAATAATPATAATPATAATAATTAA 84 Query: 319 STPPPSAAARPDRA-RSTTP---AEPATSGAAGGGAGGADAD-PTDGTTPRPGRDDGRGR 155 + + AA P RA R+ TP A PAT+ A A A A+ P TP Sbjct: 85 TAATAATAATPARAARAATPATAATPATAATAATAATAATAETPARAATPATAATPATAA 144 Query: 154 SGGLAETAYARRRRRSAAAARRAAAVHASQPYALSPSRISD*ARAAREA 8 + A TA +AA A RA A+ A +P+ + ARAAR A Sbjct: 145 TPATAATAATAATSATAATAARA----ATPATAATPATPATAARAARAA 189 Score = 53.9 bits (128), Expect = 7e-06 Identities = 51/172 (29%), Positives = 66/172 (38%), Gaps = 14/172 (8%) Frame = -1 Query: 481 ARTASRTRAASRDGPAEGAPEATPVTAPALAATVPPSSSRSDPLLPLHM--LTAAESTPP 308 A A+ AA+ PA A ATP TAP A P+++ + P AA + P Sbjct: 204 ATAATAATAATAATPARAARAATPATAPTPATAATPATAATAATAPTAATPARAARAATP 263 Query: 307 PSAAARPDRARSTTPAEPATSG-------AAGGGAGGADADPTDGTTPRPGRDDGRGRSG 149 +AA A TPA PAT+ AA A P TP + Sbjct: 264 ATAATLATAATPATPATPATAATDATAATAATPARAATPATPATAATPATPATAATAATA 323 Query: 148 GLAETA-----YARRRRRSAAAARRAAAVHASQPYALSPSRISD*ARAAREA 8 A TA AR + AA AA A+ A + + + ARAAR A Sbjct: 324 ATAATAATPARAARAATPATAATPATAATAATAATAATAATAATPARAARAA 375 [5][TOP] >UniRef100_UPI0000F2D3F0 PREDICTED: similar to splicing factor proline/glutamine-rich (polypyrimidine tract binding protein associated), n=1 Tax=Monodelphis domestica RepID=UPI0000F2D3F0 Length = 700 Score = 55.5 bits (132), Expect = 2e-06 Identities = 44/143 (30%), Positives = 61/143 (42%), Gaps = 6/143 (4%) Frame = +3 Query: 33 SEILEGDNAYGCEACTAAARRAAAAERRRRRAYAVSAKPPLLPRPSSRPGLGVVPSVGSA 212 +++L A A AAA AAAA +++ A P P+P PG P+VG+A Sbjct: 67 AQVLAQQQAQQAAAAAAAAAAAAAAAAAQQQ----QASSPDPPKPGLPPGSSPGPTVGTA 122 Query: 213 -----SAPPAPPPAAPDVAGSAGVVDLARSGLAAAEGGGVDSAAV-SMCSGSSGSDREED 374 SAP APPP + +G A SG +A G S++ ++ S SSG Sbjct: 123 APASVSAPSAPPPGSGGPSGPGSASSQASSGPSAPPGAPQQSSSTPAVSSASSGGPPPPP 182 Query: 375 GGTVAARAGAVTGVASGAPSAGP 443 G + G G G GP Sbjct: 183 PGAAGPKPGPSPGGPKGKMPGGP 205 [6][TOP] >UniRef100_B9BBJ9 Putative membrane protein n=1 Tax=Burkholderia multivorans CGD1 RepID=B9BBJ9_9BURK Length = 517 Score = 55.5 bits (132), Expect = 2e-06 Identities = 49/148 (33%), Positives = 64/148 (43%), Gaps = 8/148 (5%) Frame = +3 Query: 72 ACTAAARRAAAAERRRRRAYAVSAKPPL-LPRPSSRPGLGVVPSVGSASAPPAPPPAAPD 248 A A + AA A A A P+ +P P++ P + + + SA A AAPD Sbjct: 313 AAAAGSPVAATASASMSAADGAPAYEPIAVPVPAAMPDVAPGMTAAAVSAASAVANAAPD 372 Query: 249 VAGS------AGVVDLARSGLAAAEGGGVDSAAVSMCSGSSGSDREEDGGTVAARAGAVT 410 A AGVVD A +G AAA GG VD+ + G AA G V Sbjct: 373 GAAGGAAVAGAGVVDAAAAGAAAAHGGVVDATGAGAAAAHEEVVDAARAGAAAAHEGVVD 432 Query: 411 GVASG-APSAGPSLDAARVLDAVRAPAV 491 +G AP+A +DA+ V AV AV Sbjct: 433 AAGAGAAPAAEAVVDASAVDAAVIREAV 460 [7][TOP] >UniRef100_A4K455 Antifreeze glycoprotein n=1 Tax=Boreogadus saida RepID=A4K455_BORSA Length = 683 Score = 55.5 bits (132), Expect = 2e-06 Identities = 51/170 (30%), Positives = 66/170 (38%), Gaps = 6/170 (3%) Frame = -1 Query: 493 PTAGARTASRTRAASRDGPAEGAPEATPVTA-----PALAATVPPSSSRSDPLLPLHMLT 329 P A A+ AA+ A A ATP A PA AAT +++ + P P T Sbjct: 487 PATAATAATAATAATAATAATAATAATPARAARAATPATAATPATAATPATPATPATPAT 546 Query: 328 AAESTPPPSAAARPDRARSTTPAEPATSGAAGGGAGGAD-ADPTDGTTPRPGRDDGRGRS 152 AA + P AA A + TPA AT+ A A A A P TP + Sbjct: 547 AATAATPARAARAATPATAATPATAATAATAATAATAATAATPARAATPATAATPATAAT 606 Query: 151 GGLAETAYARRRRRSAAAARRAAAVHASQPYALSPSRISD*ARAAREAVS 2 A TA + AA A A A +P+R + A AA A + Sbjct: 607 AATAATA-------ATAATAATAPTPARAARAATPARAATAAAAATAATA 649 Score = 54.7 bits (130), Expect = 4e-06 Identities = 59/172 (34%), Positives = 73/172 (42%), Gaps = 10/172 (5%) Frame = -1 Query: 493 PTAGARTASRTRAASRDGPAEGAPEATPVT--APALAATV--PPSSSRS----DPLLPLH 338 P AR A+ AA+ PA A ATP T PA AAT P ++R+ P Sbjct: 514 PARAARAATPATAAT---PATAATPATPATPATPATAATAATPARAARAATPATAATPAT 570 Query: 337 MLTAAESTPPPSAAARPDRARSTTPAEPATSGAAGGGAGGADADP--TDGTTPRPGRDDG 164 TAA + +AA AR+ TPA AT A A A A T T P P R Sbjct: 571 AATAATAATAATAATAATPARAATPATAATPATAATAATAATAATAATAATAPTPAR-AA 629 Query: 163 RGRSGGLAETAYARRRRRSAAAARRAAAVHASQPYALSPSRISD*ARAAREA 8 R + A TA A +AA A AA + A +P+R + A AA A Sbjct: 630 RAATPARAATAAAAATAATAATAATAATAATAATLA-TPARAATPATAATPA 680 [8][TOP] >UniRef100_UPI0000D661C1 PREDICTED: hypothetical protein n=1 Tax=Mus musculus RepID=UPI0000D661C1 Length = 243 Score = 55.1 bits (131), Expect = 3e-06 Identities = 60/197 (30%), Positives = 73/197 (37%), Gaps = 42/197 (21%) Frame = -1 Query: 526 DTSRLGWGRVMPTAGARTASRTRAA-SRDGPAEGAPEATPVTA--PALAATVPPSSSRSD 356 +T+ GW P + A +R A S +G EG PE T +T P PP S Sbjct: 10 ETAPEGW---RPRSAAPGRARVGAGGSGNGHREGPPEGTGMTPTYPGRRRVTPPPSRTCG 66 Query: 355 PLLPLHMLTAAESTPPPSAAARPDRARSTTPAEPATSGAAG------------------G 230 L P PPP+A +P A S P E A GAAG Sbjct: 67 RLAPASPSPRPPHAPPPAAWDQPPTAPSPGPEEDAGGGAAGPRPVPARTAPPPRRNKARR 126 Query: 229 GAGGADADPT----------DGTTPRPGRD-------DGRGRSGGLAETAYARRRRRS-- 107 G G A T G+ PRPGR + RGR G A RRRRRS Sbjct: 127 GRAGERAGSTHRGRAGPGVGPGSPPRPGRGRAPAAVRELRGRGGSRARQPGQRRRRRSLL 186 Query: 106 --AAAARRAAAVHASQP 62 + RR ++ S P Sbjct: 187 PPGSLLRRVFSLAGSPP 203 [9][TOP] >UniRef100_Q73WN4 Putative uncharacterized protein n=1 Tax=Mycobacterium avium subsp. paratuberculosis RepID=Q73WN4_MYCPA Length = 363 Score = 54.3 bits (129), Expect = 5e-06 Identities = 51/142 (35%), Positives = 61/142 (42%), Gaps = 4/142 (2%) Frame = +3 Query: 72 ACTAAARRAAAAERRRRRAYAVSAKPPLLPRPSSRPGLGVVPSVGSASAPPAPPPAAPDV 251 A A AAAA A +A PP P P++ P G V +A P PPP AP Sbjct: 145 AHAAGPAPAAAAPSAPAPVAAPAATPPSAPAPAAAPAPGPVQPATVPAAAPVPPPPAPAA 204 Query: 252 AGSA--GVVDLARSGLAAAEGGGVDSAAV-SMCSGSSGSDREEDGGTVAARAGAVTGVAS 422 A A G D A + AAA G G D+ S G++ DG + A A +V G A Sbjct: 205 AAPATPGAPDAAPAP-AAAPGFGADAPPTQDFMYPSIGTNCLADGSSAIATALSVAGPAK 263 Query: 423 -GAPSAGPSLDAARVLDAVRAP 485 AP GP A V AV P Sbjct: 264 IPAPGPGPG-QTAYVFTAVGTP 284 [10][TOP] >UniRef100_A4X1E8 DNA polymerase III, subunits gamma and tau n=1 Tax=Salinispora tropica CNB-440 RepID=A4X1E8_SALTO Length = 808 Score = 53.9 bits (128), Expect = 7e-06 Identities = 58/161 (36%), Positives = 70/161 (43%), Gaps = 24/161 (14%) Frame = -1 Query: 442 GPAEG---APEATPVTAPA-----LAATVPPSSSRSDP----LLPLHMLTAAESTPP--- 308 GPA G A A P TAPA +A PP SS D + P +A E P Sbjct: 577 GPAAGPRAAGPARPATAPARPDPAVAPAAPPRSSAGDGAVDGMAPRSAGSADEQEWPEPA 636 Query: 307 -PSAAARPDRARSTTPAEPATSGAAGGG--AGGADADPTDGTTPRPGRDDGRGRSGGLAE 137 P AA P+ A T PAT+ G G A A A G+T GR G G + A Sbjct: 637 RPGGAAPPEPAAGTAEEWPATARPGGAGVDATAAAAAGPGGSTTGGGRASGAGVAP--AA 694 Query: 136 TAYAR------RRRRSAAAARRAAAVHASQPYALSPSRISD 32 +A +R R SA AA RAAA +Q A SP R ++ Sbjct: 695 SAVSRPPVTSGARASSAIAAARAAAAGGAQRSAASPRRTAE 735 [11][TOP] >UniRef100_Q8CJQ8 Translation initiation factor IF-2 n=1 Tax=Streptomyces coelicolor RepID=IF2_STRCO Length = 1033 Score = 53.5 bits (127), Expect = 9e-06 Identities = 47/132 (35%), Positives = 54/132 (40%), Gaps = 7/132 (5%) Frame = -1 Query: 493 PTAGARTASRTRAASRDGPAEGAPEATPVTAPALAATVPPSSSRSDP---LLPLHMLTAA 323 P+ A A AA R A AP A AP+ A P R P P A Sbjct: 83 PSQAAPAAGDRAAAPRPSAAPKAPAAQQPAAPSAPAPAPSQGPRPTPGPKPAPRPAPAAP 142 Query: 322 ESTPPPSAAARPDRARSTTPAEPATSGAAGGGAGGADADPTDGTTPRPGRD----DGRGR 155 E T PP+A A P +TPA PA SG GGA P PG+D G+GR Sbjct: 143 EFTAPPAAPAAP-----STPA-PAPSGPKPGGARPGAPKPGGARPSGPGQDRGQQGGQGR 196 Query: 154 SGGLAETAYARR 119 GG A A+R Sbjct: 197 PGGQRPGAPAQR 208