AU191069 ( PFL011b07_r )

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[1][TOP]
>UniRef100_A8ZMJ1 Phycobilisome 32.1 kDa linker polypeptide n=1 Tax=Acaryochloris
           marina MBIC11017 RepID=A8ZMJ1_ACAM1
          Length = 290

 Score =  113 bits (282), Expect = 1e-23
 Identities = 67/161 (41%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  D ++ + A  RQV GN +L E E   ++ L SQF    LT+K+ VR +AK+  Y
Sbjct: 25  PNWSQKDAEMTINAVYRQVLGNDHLMEAER--LSGLESQFANGLLTVKDFVRAVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           +S+F+ P+   R++ELN+KHLLGR P ++AEV  H     + GY+ADID+Y  + EYD+ 
Sbjct: 83  KSKFLYPHFHTRVIELNFKHLLGRAPYSEAEVIEHLDRYQNEGYEADIDSYIDSKEYDAS 142

Query: 418 FGDNVVP---STVFRGTYRSSEEFNRLCKSNAGPAASDKAK 531
           FGD++VP     V  G  + +  F RL     G A SD+A+
Sbjct: 143 FGDSIVPYYRDLVTTGVGQQTVGFTRLFNLYRGYANSDRAQ 183

[2][TOP]
>UniRef100_P18543 Phycobilisome 27.9 kDa linker polypeptide,
           phycoerythrin-associated, rod n=2 Tax=Microchaetaceae
           RepID=PYR2_FREDI
          Length = 249

 Score =  108 bits (270), Expect = 3e-22
 Identities = 65/169 (38%), Positives = 97/169 (57%), Gaps = 4/169 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  +    + A  +QV GN ++ E E    A   SQ   R++T++E VR +AK+  Y
Sbjct: 11  PSSSLEEVQTIIRAVYKQVLGNPHVMESERLVTA--ESQLCDRSITVREFVRSVAKSDFY 68

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSL 417
           R+R+    + YR VELN+ HLLGR P  Q EVS H    ++ GYDA+ID+Y   +EY++ 
Sbjct: 69  RNRYFQSCAPYRFVELNFLHLLGRAPQDQREVSEHIVRTVAEGYDAEIDSYIDSSEYEAA 128

Query: 418 FGDNVVPSTVFRGTYRSSEE--FNRLCKSNAGPAASDKAKRGLNMLVTV 558
           FG+NVVP    R +  +S++  FNR+   + GPA  D A +   ++  V
Sbjct: 129 FGENVVPYYRGRSSEANSKQVGFNRIFALDRGPAQIDSAVKSAQLVYAV 177

[3][TOP]
>UniRef100_Q7NGF2 Phycocyanin-associated rod linker protein n=1 Tax=Gloeobacter
           violaceus RepID=Q7NGF2_GLOVI
          Length = 219

 Score =  108 bits (269), Expect = 4e-22
 Identities = 71/183 (38%), Positives = 95/183 (51%), Gaps = 9/183 (4%)
 Frame = +1

Query: 1   PAPFPCARPATYSSVDATIDAP---RLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVL 171
           PA      P   SSV   +      +    D   A+ AA +Q+FGN Y+ E E    A  
Sbjct: 16  PADLEALGPPDISSVAIPLKVELWAKADVSDVQAAIVAAYKQIFGNTYVLESERLTSA-- 73

Query: 172 TSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHT 348
            S  R  +++++E VR LAK+  Y+ RF    S  R  ELN+KH LGR P  Q+E++AH 
Sbjct: 74  ESLLRNGSISVREFVRLLAKSELYKERFFFCTSNNRFTELNFKHFLGRAPYNQSEIAAHL 133

Query: 349 QTLMSAGYDADIDTYFGA-EYDSLFGDNVVPSTVFRGTYRSS----EEFNRLCKSNAGPA 513
               + GYDA+ID+Y  + EY   FG+NVVP   +RG    S    E FNR+ K   G A
Sbjct: 134 DRYQTFGYDAEIDSYIDSDEYIQAFGENVVP--YYRGFKSQSGQTVESFNRMFKLYRGDA 191

Query: 514 ASD 522
            SD
Sbjct: 192 GSD 194

[4][TOP]
>UniRef100_Q0ICT3 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. CC9311
           RepID=Q0ICT3_SYNS3
          Length = 502

 Score =  107 bits (266), Expect = 8e-22
 Identities = 63/157 (40%), Positives = 94/157 (59%), Gaps = 3/157 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + A+ +QV GN +L E E A  A   S++    L+ +E VR L  +A Y+ RF   N+ Y
Sbjct: 267 IRASYKQVMGNPHLMEFERAISA--ESKYVDGYLSTREFVRALGLSAEYKRRFFETNAPY 324

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP-STV 447
           R +ELN+KH LGR P +QAE+S HT+ L  +GY+A+I +Y    EY ++FG++ VP + +
Sbjct: 325 RFIELNFKHFLGRAPKSQAEISEHTKILAESGYEAEICSYVDSVEYQTIFGEDTVPFARI 384

Query: 448 FRGTYRSSEEFNRLCKSNAGPAASDKAKRGLNMLVTV 558
                RS   FNR  K   G AASD  + G +++ +V
Sbjct: 385 LSENGRSQIAFNRHLKLAEGYAASDTVQTGSSLVTSV 421

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 62/160 (38%), Positives = 89/160 (55%), Gaps = 4/160 (2%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           D  +AAA RQVFGNA++ + E +    L +Q R   LT+++ VRGLAK++ Y+ RF T  
Sbjct: 31  DDVIAAAYRQVFGNAHVMDFERSKE--LEAQLRNGELTVRDFVRGLAKSSFYKQRFFTAV 88

Query: 268 STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPS 441
              R ++LN KHLLGR P +QAE+SA        G +A ID+    AEY  +FG +VVP 
Sbjct: 89  GPQRGIDLNIKHLLGRAPHSQAEISAKISLQAEHGQEAVIDSIVDSAEYLEVFGSDVVPY 148

Query: 442 TVFRGTYR--SSEEFNRLCKSNAGPAASDKAKRGLNMLVT 555
                +    ++  F  L       A SD A+ G + L++
Sbjct: 149 ARAWSSPADLATSAFPLLAAIQKSFAGSDSARGGSSNLIS 188

[5][TOP]
>UniRef100_Q3AWD1 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. CC9902
           RepID=Q3AWD1_SYNS9
          Length = 546

 Score =  106 bits (264), Expect = 1e-21
 Identities = 64/157 (40%), Positives = 91/157 (57%), Gaps = 3/157 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + A+ +QV GN +L E E A  A   S+F    L+ +E VR +  +A Y+ RF   N+ Y
Sbjct: 311 IRASYKQVMGNPHLMEFERAISA--ESKFIDGYLSTREFVRAIGLSAEYKRRFFETNAPY 368

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP-STV 447
           R +ELN+KH LGR P +QAE+S HT+ L   GYDA+I +Y    EY S FG++ VP + +
Sbjct: 369 RFIELNFKHFLGRAPKSQAEISLHTKILAEGGYDAEIASYVDCEEYQSTFGEDTVPFARI 428

Query: 448 FRGTYRSSEEFNRLCKSNAGPAASDKAKRGLNMLVTV 558
                RS   FNR  K   G AASD  +   +++ +V
Sbjct: 429 LSENGRSQVAFNRHLKLAEGFAASDTVQTSSSLVTSV 465

 Score = 91.7 bits (226), Expect = 3e-17
 Identities = 69/175 (39%), Positives = 95/175 (54%), Gaps = 4/175 (2%)
 Frame = +1

Query: 43  VDATIDAPRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRG 222
           V A   +P  SA   DV ++AA RQVFGNA++ + E    A L +Q R  ++ ++  +RG
Sbjct: 62  VTAECYSPDDSASLSDV-ISAAYRQVFGNAHVMDFERC--AELEAQLRNGDIDVRNFIRG 118

Query: 223 LAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF- 396
           LAK++ Y+SRF    +  R +ELN+KHLLGR P +QAE+SA        G  A ID+   
Sbjct: 119 LAKSSFYKSRFFLSVAPQRGIELNFKHLLGRAPHSQAEMSAKISLQAEHGQAAVIDSIVD 178

Query: 397 GAEYDSLFGDNVVP--STVFRGTYRSSEEFNRLCKSNAGPAASDKAKRGLNMLVT 555
            AEY  +FG NVVP   +       S+  F  L       A SD A+ G + L T
Sbjct: 179 SAEYLEVFGSNVVPYARSWSSPADLSTAAFPMLAALEKSFAGSDSARGGSSSLTT 233

[6][TOP]
>UniRef100_A5GJ13 Phycobilisome linker polypeptide, C-phycoerythrin-associated n=1
           Tax=Synechococcus sp. WH 7803 RepID=A5GJ13_SYNPW
          Length = 546

 Score =  106 bits (264), Expect = 1e-21
 Identities = 67/157 (42%), Positives = 89/157 (56%), Gaps = 3/157 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + A  RQV GN +L E E A  A   S+F    L+ +ELVR +A +  Y  RF   N+ Y
Sbjct: 311 IRATYRQVMGNPHLMESERAMSA--ESKFAEGYLSTRELVRAIALSPEYSRRFFETNAPY 368

Query: 277 RLVELNYKHLLGRGPT-QAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP-STV 447
           R VELN+KHLLGR PT QAE+S H Q L + GY+A+I++Y    EY S FG++ VP   +
Sbjct: 369 RFVELNFKHLLGRAPTSQAELSEHIQILANDGYEAEINSYLDSTEYQSTFGEDTVPYLRI 428

Query: 448 FRGTYRSSEEFNRLCKSNAGPAASDKAKRGLNMLVTV 558
                RS   FNR      G AASD      +++ +V
Sbjct: 429 LSEQGRSQLAFNRHLSLAEGYAASDTVLNSSSLVTSV 465

 Score =  101 bits (252), Expect = 3e-20
 Identities = 60/121 (49%), Positives = 78/121 (64%), Gaps = 2/121 (1%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           D A+ AA RQV+GNA++ + E +    L +QF    L +++ VRGLAK+  YR+RF    
Sbjct: 74  DAAINAAYRQVYGNAHVMDNERS--VELEAQFCNGELNVRDFVRGLAKSNFYRARFFEGV 131

Query: 268 STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPS 441
           +  R +ELN KHLLGR P  QAE+SAH   L S G+DA ID    GAEY  +FGD+VVP 
Sbjct: 132 APQRGIELNLKHLLGRPPINQAEMSAHITLLASGGHDAVIDFIVDGAEYAEVFGDDVVPY 191

Query: 442 T 444
           T
Sbjct: 192 T 192

[7][TOP]
>UniRef100_Q05Z86 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. BL107
           RepID=Q05Z86_9SYNE
          Length = 546

 Score =  106 bits (264), Expect = 1e-21
 Identities = 64/157 (40%), Positives = 91/157 (57%), Gaps = 3/157 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + A+ +QV GN +L E E A  A   S+F    L+ +E VR +  +A Y+ RF   N+ Y
Sbjct: 311 IRASYKQVMGNPHLMEFERAISA--ESKFIDGYLSTREFVRAIGLSAEYKRRFFETNAPY 368

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP-STV 447
           R +ELN+KH LGR P +QAE+S HT+ L   GYDA+I +Y    EY S FG++ VP + +
Sbjct: 369 RFIELNFKHFLGRAPKSQAEISEHTKILAEGGYDAEIASYVDCEEYQSTFGEDTVPFARI 428

Query: 448 FRGTYRSSEEFNRLCKSNAGPAASDKAKRGLNMLVTV 558
                RS   FNR  K   G AASD  +   +++ +V
Sbjct: 429 LSENGRSQVAFNRHLKLAEGFAASDTVQTSSSLVTSV 465

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 64/157 (40%), Positives = 87/157 (55%), Gaps = 4/157 (2%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           +AAA RQVFGNA++ + E    A L +Q R  +L ++  +RGLAK++ Y+SRF    +  
Sbjct: 79  IAAAYRQVFGNAHVMDFERC--AELEAQLRNGDLDVRNFIRGLAKSSFYKSRFFLSVAPQ 136

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP--ST 444
           R +ELN+KHLLGR P +QAE+SA        G  A ID+    AEY  +FG NVVP   +
Sbjct: 137 RGIELNFKHLLGRAPHSQAEMSAKISLQAEHGQAAVIDSIVDSAEYLEVFGSNVVPYARS 196

Query: 445 VFRGTYRSSEEFNRLCKSNAGPAASDKAKRGLNMLVT 555
                  S+  F  L       A SD A+ G + L T
Sbjct: 197 WSSPADLSTAAFPMLAAIQKSFAGSDSARGGSSALTT 233

[8][TOP]
>UniRef100_A4CSF1 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. WH 7805
           RepID=A4CSF1_SYNPV
          Length = 539

 Score =  106 bits (264), Expect = 1e-21
 Identities = 64/157 (40%), Positives = 90/157 (57%), Gaps = 3/157 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + +  RQV GN +L E E +  A   S+F    L+ +E VR +A +A Y  RF   N+ Y
Sbjct: 304 IRSTYRQVMGNPHLMESERSLTA--ESKFAEGTLSTREFVRAIALSAEYSRRFFETNAPY 361

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP-STV 447
           R VELN+KHLLGR P +QAEVS H Q L + GY+A+I++Y  G+EY   FG+  +P   V
Sbjct: 362 RFVELNFKHLLGRAPVSQAEVSEHIQRLANEGYEAEINSYLDGSEYQEAFGEYTIPFQRV 421

Query: 448 FRGTYRSSEEFNRLCKSNAGPAASDKAKRGLNMLVTV 558
                RS   FNR    + G A+SD  +    ++ +V
Sbjct: 422 STENGRSQVAFNRNLALSQGYASSDTVQTSSTLVTSV 458

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 57/148 (38%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           V AA RQVFGN    E E A  A   S  R  +++++E +R +AK+  YRSR+      +
Sbjct: 64  VRAAYRQVFGNVQPMESERATSA--ESMLRNGDISVREFIRTIAKSEFYRSRYFEAVGPH 121

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP--ST 444
           R VEL++KHLLGRGP  +AE++A    +   G+DA ID    + EY   FG++ VP  S+
Sbjct: 122 RAVELSFKHLLGRGPVNEAEITAQVTLMADGGFDAAIDGILDSDEYIQAFGEDTVPYSSS 181

Query: 445 VFRGTYRSSEEFNRLCKSNAGPAASDKA 528
                 +    FNR+       A SD A
Sbjct: 182 FTSQAGQPQASFNRIAALERNFAGSDTA 209

[9][TOP]
>UniRef100_Q44112 30 kD rod-rod linker n=2 Tax=Synechococcus elongatus
           RepID=Q44112_SYNP6
          Length = 273

 Score =  105 bits (263), Expect = 2e-21
 Identities = 67/150 (44%), Positives = 89/150 (59%), Gaps = 6/150 (4%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + A  RQV GN Y+   E    A   S  RG  +++++ VR +A +  YR +F   N+  
Sbjct: 36  IRAVYRQVLGNDYVMSTERLTSA--ESLLRGGEISVRDFVRAVALSELYREKFFHNNAHN 93

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPSTVF 450
           R +ELN+KHLLGR P  QAEV+AH  T  S GYDADI++Y   AEY   FGDNVVP   F
Sbjct: 94  RFIELNFKHLLGRAPYDQAEVAAHAATYHSHGYDADINSYIDSAEYTESFGDNVVP--YF 151

Query: 451 RG--TYRSSEE--FNRLCKSNAGPAASDKA 528
           RG  T R+ +   FNR+ +   G A SD++
Sbjct: 152 RGFATIRAQKTVGFNRIFQLYRGYATSDRS 181

[10][TOP]
>UniRef100_P18542 Phycobilisome 31.8 kDa linker polypeptide,
           phycoerythrin-associated, rod n=2 Tax=Microchaetaceae
           RepID=PYR1_FREDI
          Length = 286

 Score =  105 bits (263), Expect = 2e-21
 Identities = 57/127 (44%), Positives = 82/127 (64%), Gaps = 2/127 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  + +  + A  RQV GNAY+ E E   +AV  SQF+   L+++E VR +AK+  Y
Sbjct: 24  PGRSQEEAETIIRAIYRQVLGNAYVMESER--LAVPESQFKRGELSVREFVRAVAKSELY 81

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGPTQ-AEVSAHTQTLMSAGYDADIDTYF-GAEYDSL 417
           RSRF T  + YR +ELN++HLLGR P    E+ +H+  L + G++A+ID+Y  G EY S 
Sbjct: 82  RSRFFTSCARYRAIELNFRHLLGRPPLDLEEMRSHSTILDTQGFEAEIDSYIDGDEYQST 141

Query: 418 FGDNVVP 438
           FG+N+VP
Sbjct: 142 FGENIVP 148

[11][TOP]
>UniRef100_Q117E7 Phycobilisome linker polypeptide n=1 Tax=Trichodesmium erythraeum
           IMS101 RepID=Q117E7_TRIEI
          Length = 278

 Score =  105 bits (262), Expect = 2e-21
 Identities = 59/161 (36%), Positives = 87/161 (54%), Gaps = 4/161 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D  + + A  +Q+ GN Y+ E      A   SQ R   +T++E VR +A+++ Y
Sbjct: 38  PNPTEEDVQIIIRAVYKQILGNQYIMESNRLSTA--ESQLRNGEITVREFVRQIAQSSLY 95

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           +S F   N+ YR +ELNYKHLLGR P  Q E+S H Q     GY+A+ID+Y    EY+  
Sbjct: 96  QSLFFNSNNQYRFIELNYKHLLGRAPQDQTEISQHVQIYNEKGYEAEIDSYIDTQEYNEN 155

Query: 418 FGDNVVPST--VFRGTYRSSEEFNRLCKSNAGPAASDKAKR 534
           FG+++VP    +       +  FNR+     GPA +D   R
Sbjct: 156 FGESIVPYPYGITSQIGLKNNTFNRIFSLLGGPATNDGDNR 196

[12][TOP]
>UniRef100_Q5N4T0 Phycobilisome rod linker polypeptide n=1 Tax=Synechococcus
           elongatus PCC 6301 RepID=Q5N4T0_SYNP6
          Length = 273

 Score =  105 bits (261), Expect = 3e-21
 Identities = 67/150 (44%), Positives = 89/150 (59%), Gaps = 6/150 (4%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + A  RQV GN Y+   E    A   S  RG  +++++ VR +A +  YR +F   N+  
Sbjct: 36  IRAVYRQVLGNDYVMGTERLTSA--ESLLRGGEISVRDFVRAVALSELYREKFFHNNAHN 93

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPSTVF 450
           R +ELN+KHLLGR P  QAEV+AH  T  S GYDADI++Y   AEY   FGDNVVP   F
Sbjct: 94  RFIELNFKHLLGRAPYDQAEVAAHAATYHSHGYDADINSYIDSAEYTESFGDNVVP--YF 151

Query: 451 RG--TYRSSEE--FNRLCKSNAGPAASDKA 528
           RG  T R+ +   FNR+ +   G A SD++
Sbjct: 152 RGFATIRAQKTVGFNRIFQLYRGYATSDRS 181

[13][TOP]
>UniRef100_A5GVN3 Phycobilisome linker polypeptide, C-phycoerythrin class I and
           II-associated n=1 Tax=Synechococcus sp. RCC307
           RepID=A5GVN3_SYNR3
          Length = 546

 Score =  103 bits (258), Expect = 7e-21
 Identities = 61/157 (38%), Positives = 91/157 (57%), Gaps = 3/157 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + +  RQV GN +L E E +  A   S+++   L+ +E VR +  +A Y+ RF   N+ Y
Sbjct: 311 IRSTYRQVMGNPHLMEFERSMSA--ESKYQDGYLSTREFVRAIGLSAEYKKRFFETNAPY 368

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP-STV 447
           R +ELN+KH LGR P +QAE+S HT+ L   GY+A+I +Y  + EY S FG++ VP + +
Sbjct: 369 RFIELNFKHFLGRAPQSQAEISEHTKILAEGGYEAEISSYVDSEEYQSTFGEDTVPFARI 428

Query: 448 FRGTYRSSEEFNRLCKSNAGPAASDKAKRGLNMLVTV 558
                RS   FNR      G AASD    G +++ +V
Sbjct: 429 LSENGRSQVGFNRHLSLAEGFAASDTVLTGSSLVTSV 465

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 61/157 (38%), Positives = 89/157 (56%), Gaps = 4/157 (2%)
 Frame = +1

Query: 94  AVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNST 273
           A+ A+ RQVFGNA++ + E      L +Q    +L ++  VRGLAK++ Y+SRF +  + 
Sbjct: 77  AINASYRQVFGNAHVMDFERC--TELEAQLCNGDLDVRNFVRGLAKSSFYKSRFFSSVAP 134

Query: 274 YRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPSTV 447
            R +ELN+KHLLGR P +QAEVS     L   G+DA ID+    AEY  +FG +VVP   
Sbjct: 135 QRGIELNFKHLLGRAPHSQAEVSGKIAVLAEHGHDAVIDSIVDSAEYLEVFGGDVVPYAR 194

Query: 448 FRGTYR--SSEEFNRLCKSNAGPAASDKAKRGLNMLV 552
              +    ++  F+ L       A SD A+ G + L+
Sbjct: 195 AWSSPADLATSAFSLLAALQKNFAGSDSARGGSSALM 231

[14][TOP]
>UniRef100_Q3M8Z3 CpcD phycobilisome linker-like n=1 Tax=Anabaena variabilis ATCC
           29413 RepID=Q3M8Z3_ANAVT
          Length = 286

 Score =  103 bits (257), Expect = 9e-21
 Identities = 65/162 (40%), Positives = 92/162 (56%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P+ S  + ++ + A  R V GN Y+   E    A   S  R  NLT++E VR +AK+  Y
Sbjct: 25  PKASREEVELVIRAVYRHVLGNDYILASERLVSA--ESLLRDGNLTVREFVRSVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + +F   +   RL+ELNYKHLLGR P  ++EV  H     + GYDA+ID+Y  + EY S 
Sbjct: 83  KKKFFYNSFQTRLIELNYKHLLGRAPYDESEVVYHLDLYQNKGYDAEIDSYIDSWEYQSN 142

Query: 418 FGDNVVPSTVFRG----TYRSSEEFNRLCKSNAGPAASDKAK 531
           FGDNVVP   +RG      + +  FNR+ +   G A SD+A+
Sbjct: 143 FGDNVVP--YYRGFETQVGQKTAGFNRIFRLYRGYANSDRAQ 182

[15][TOP]
>UniRef100_P11400 Phycobilisome 39 kDa linker polypeptide, phycocyanin-associated,
           rod n=2 Tax=Microchaetaceae RepID=PYR3_FREDI
          Length = 289

 Score =  103 bits (257), Expect = 9e-21
 Identities = 60/161 (37%), Positives = 93/161 (57%), Gaps = 5/161 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +A D  + + A  RQV GN YL + E   +  L S      L++++ VR +AK+  Y
Sbjct: 24  PNWTAEDAKIVIQAVYRQVLGNDYLMQSER--LTSLESLLTNGKLSVRDFVRAVAKSELY 81

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSL 417
           +++F+ P+   R++ELN+KHLLGR P  ++EV  H     + G+DADID+Y   AEYD+ 
Sbjct: 82  KTKFLYPHFQTRVIELNFKHLLGRAPYDESEVIEHLDRDQNQGFDADIDSYIDSAEYDTY 141

Query: 418 FGDNVVP---STVFRGTYRSSEEFNRLCKSNAGPAASDKAK 531
           FGD++VP     V  G  + +  F R  +   G A SD+++
Sbjct: 142 FGDSIVPYYRDLVTTGVGQRTVGFTRSFRLYRGYANSDRSQ 182

[16][TOP]
>UniRef100_B0JHB7 Phycobilisome rod linker polypeptide n=1 Tax=Microcystis aeruginosa
           NIES-843 RepID=B0JHB7_MICAN
          Length = 271

 Score =  103 bits (256), Expect = 1e-20
 Identities = 59/153 (38%), Positives = 92/153 (60%), Gaps = 6/153 (3%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           +V +  A RQ+ GN +L   E   +  L S  R R++++++ VR +A++  YR +F   N
Sbjct: 33  EVVIRGAYRQILGNEHLMSSER--LISLESLLRNRSISVRDFVRAIAQSELYRQKFFHSN 90

Query: 268 STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVPS 441
              R +ELNYKHLLGR P  QAE++ H+      GY+A+I++YF + EY+  FG+N+VP 
Sbjct: 91  PQNRFIELNYKHLLGRAPYDQAEIAVHSDLYNQQGYEAEINSYFDSPEYNQHFGENIVP- 149

Query: 442 TVFRG----TYRSSEEFNRLCKSNAGPAASDKA 528
             +RG    T + +  F+RL +   G A SD+A
Sbjct: 150 -YYRGFATQTGQKTVGFSRLFQVYRGYATSDRA 181

[17][TOP]
>UniRef100_Q05Q40 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. RS9916
           RepID=Q05Q40_9SYNE
          Length = 548

 Score =  103 bits (256), Expect = 1e-20
 Identities = 63/157 (40%), Positives = 89/157 (56%), Gaps = 3/157 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + A  +QV GN +L E E A  A   S+F    L+ +E VR +  +A Y+ RF   N+ Y
Sbjct: 313 IRATYKQVMGNPHLMEFERAISA--ESKFIDGYLSTREFVRAIGLSAEYKRRFFETNAPY 370

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP-STV 447
           R +ELN+KH LGR P +QAE+S HT+ L   GY+A+I +Y    EY S FG++ VP + +
Sbjct: 371 RFIELNFKHFLGRAPKSQAEISEHTRILAEGGYEAEICSYVDCEEYQSTFGEDTVPFARI 430

Query: 448 FRGTYRSSEEFNRLCKSNAGPAASDKAKRGLNMLVTV 558
                RS   FNR  K   G AASD  +    ++ +V
Sbjct: 431 LSENGRSQVAFNRHLKLAEGYAASDTVQTSSALVTSV 467

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 60/155 (38%), Positives = 86/155 (55%), Gaps = 4/155 (2%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           +AAA RQVFGNA++ + E ++   L +Q     L ++  +RGLAK++ Y++RF    +  
Sbjct: 80  IAAAYRQVFGNAHVMDFERSNE--LEAQLCNGELDVRNFIRGLAKSSFYKNRFFAAVAPQ 137

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPSTVF 450
           R +ELN+KHLLGR P  Q+EVSA        G+DA ID+    AEY  +FG +VVP    
Sbjct: 138 RGIELNFKHLLGRAPHAQSEVSAKIALQAEHGHDALIDSIIDSAEYLEVFGSDVVPYARA 197

Query: 451 RGTYR--SSEEFNRLCKSNAGPAASDKAKRGLNML 549
             +    S+  F  L       A SD A+ G + L
Sbjct: 198 WNSPADLSTAAFPMLAAVQKSFAGSDSARGGNSAL 232

[18][TOP]
>UniRef100_A0ZN82 Phycocyanin-associated rod linker protein n=1 Tax=Nodularia
           spumigena CCY9414 RepID=A0ZN82_NODSP
          Length = 286

 Score =  102 bits (255), Expect = 2e-20
 Identities = 64/162 (39%), Positives = 92/162 (56%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  + +V + AA RQ+ GN YL   E    A   S  R  NL+++E VR +AK+  Y
Sbjct: 25  PNASKDEAEVVIRAAYRQILGNDYLMASERLVSA--ESLLRDGNLSVREFVRSIAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           +++F   +   RL+ELNYKHLLGR P  +AEV  H     + GYDA+ID+Y  + EY + 
Sbjct: 83  KNKFFYNSFQTRLIELNYKHLLGRAPYDEAEVVYHLDLYQNKGYDAEIDSYIDSPEYQNN 142

Query: 418 FGDNVVPSTVFRG----TYRSSEEFNRLCKSNAGPAASDKAK 531
           FGDN+VP   +RG      + +  F R+ +   G A SD+ +
Sbjct: 143 FGDNIVP--YYRGFDNQPGQKTVGFTRMFRLYRGYANSDRTQ 182

[19][TOP]
>UniRef100_Q2JIA0 Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated,
           rod n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13)
           RepID=Q2JIA0_SYNJB
          Length = 285

 Score =  102 bits (254), Expect = 2e-20
 Identities = 64/162 (39%), Positives = 92/162 (56%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S    +  + A  RQV GN +LF  +  ++A   S  R  +LT++E VR +AK+ AY
Sbjct: 25  PNASQDQLNAVLRAIYRQVLGNDHLFGADRKELASAESLLRQGSLTVREFVRLIAKSEAY 84

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGPTQ-AEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + RF  PNS  R +ELN+KHLLGR PT   +++ H     S G+ A+ID+Y  + EY   
Sbjct: 85  KKRFFYPNSQTRAIELNFKHLLGRAPTSPKDIARHLDIYQSGGHSAEIDSYIDSPEYLEA 144

Query: 418 FGDNVVPSTVFRG-TYR---SSEEFNRLCKSNAGPAASDKAK 531
           FGDN+VP    RG  YR   S+ +F  L     G A +D+++
Sbjct: 145 FGDNIVPYP--RGFEYRKAHSTRDFTNLFALYGGYANNDRSQ 184

[20][TOP]
>UniRef100_A5HIW5 CpeE n=2 Tax=Microchaetaceae RepID=A5HIW5_9CYAN
          Length = 252

 Score =  102 bits (254), Expect = 2e-20
 Identities = 64/160 (40%), Positives = 88/160 (55%), Gaps = 4/160 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + A  RQV GNA++FE +    A   SQ R  ++T+   VR +A++  Y
Sbjct: 14  PNATEEDLQATIRAVYRQVLGNAHIFENQRLTNA--ESQLRNGDITVAGFVRAVAQSDLY 71

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           RS F   +S YR +ELN+KHLLGR P  QAE++ H Q   + GY A+I++Y  + EY   
Sbjct: 72  RSLFFETSSPYRFIELNFKHLLGRAPQDQAEIAEHVQIYNTQGYAAEINSYIDSDEYIRS 131

Query: 418 FGDNVVPSTVFRGTYRSSEE--FNRLCKSNAGPAASDKAK 531
           FGDN+VPS     T    +   FNR      G AA+D  K
Sbjct: 132 FGDNIVPSARGNRTQAGIKNVGFNRTFALMRGFAANDVGK 171

[21][TOP]
>UniRef100_P07123 Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated,
           rod n=1 Tax=Nostoc sp. PCC 7120 RepID=PYR1_ANASP
          Length = 286

 Score =  102 bits (254), Expect = 2e-20
 Identities = 65/162 (40%), Positives = 91/162 (56%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P+ S  + +  + A  R V GN Y+   E    A   S  R  NLT++E VR +AK+  Y
Sbjct: 25  PKASREEVESVIRAVYRHVLGNDYILASERLVSA--ESLLRDGNLTVREFVRSVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + +F   +   RL+ELNYKHLLGR P  ++EV  H     + GYDA+ID+Y  + EY S 
Sbjct: 83  KKKFFYNSFQTRLIELNYKHLLGRAPYDESEVVYHLDLYQNKGYDAEIDSYIDSWEYQSN 142

Query: 418 FGDNVVPSTVFRG----TYRSSEEFNRLCKSNAGPAASDKAK 531
           FGDNVVP   +RG      + +  FNR+ +   G A SD+A+
Sbjct: 143 FGDNVVP--YYRGFETQVGQKTAGFNRIFRLYRGYANSDRAQ 182

[22][TOP]
>UniRef100_Q7NL62 Phycoerythrin-associated linker protein n=1 Tax=Gloeobacter
           violaceus RepID=Q7NL62_GLOVI
          Length = 255

 Score =  102 bits (253), Expect = 3e-20
 Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 6/163 (3%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           ++ + A  +QV GN +L E E   +    S+ +   ++++E VR +AK+  YRSRF    
Sbjct: 28  EIVIRAVYKQVLGNPHLMESER--LVRDESKLKNSEISVREFVRTVAKSELYRSRFFETC 85

Query: 268 STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVPS 441
             YR +ELN+KHLLGR P  Q E+S H +  +  GYDA+ID+Y  + EY   FG++ VP 
Sbjct: 86  GPYRFIELNFKHLLGRAPLDQTEISVHVRLCVEQGYDAEIDSYLDSDEYQDAFGEDTVPF 145

Query: 442 TVFRGTY----RSSEEFNRLCKSNAGPAASDKAKRGLNMLVTV 558
              RG+     +    FNR+     GPA +DK  +   +L +V
Sbjct: 146 P--RGSLSQVGQKQVGFNRMSFLLRGPAEADKGVKEAQLLYSV 186

[23][TOP]
>UniRef100_Q7NGT2 Glr2806 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NGT2_GLOVI
          Length = 729

 Score =  102 bits (253), Expect = 3e-20
 Identities = 68/172 (39%), Positives = 90/172 (52%), Gaps = 8/172 (4%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  D    + A  RQV GN Y+ E E    A   S  R  +++++E VR +AK+  Y
Sbjct: 92  PNASEEDLQGVLRAVYRQVLGNTYVMESERPTQA--ESLLRNGSISVREFVRRIAKSDLY 149

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + RF    S  R +ELN+KHLLGR P    E+  H      AGYD +ID+Y  + EY   
Sbjct: 150 KERFFNKASNNRFIELNFKHLLGRAPYNHGEIQEHFGLYHKAGYDVEIDSYIDSDEYIET 209

Query: 418 FGDNVVPSTVFRG----TYRSSEEFNRLCKSNAGPAAS--DKAKRGLNMLVT 555
           FG+N+VP   FRG    T +S+  F R+ K   G A S  D+ K G   LVT
Sbjct: 210 FGENIVP--YFRGFKYQTNQSAGGFPRMVKLWGGDAGSDTDRGKNGQRTLVT 259

 Score =  100 bits (250), Expect = 6e-20
 Identities = 69/172 (40%), Positives = 90/172 (52%), Gaps = 8/172 (4%)
 Frame = +1

Query: 64   PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
            P  S  D    + A  RQV GN Y+ E E    A   S  R  +++++E VR +AK+  Y
Sbjct: 548  PNASEEDLQGVLRAVYRQVLGNTYVMESERPTQA--ESLLRNGSISVREFVRRIAKSDLY 605

Query: 244  RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
            + RF    S  R +ELN+KHLLGR P    E+  H      AGYDA+ID+Y  + EY   
Sbjct: 606  KERFFNKASNNRFIELNFKHLLGRAPYNHGEIQEHFGLYHKAGYDAEIDSYIDSDEYLLT 665

Query: 418  FGDNVVPSTVFRG----TYRSSEEFNRLCKSNAGPAAS--DKAKRGLNMLVT 555
            FG++VVP   FRG    T +S+  F R  K   G A S  D+ K G   LVT
Sbjct: 666  FGEDVVP--YFRGFKYQTNQSAGGFPRFTKLYGGDAGSDTDRGKNGQRTLVT 715

 Score =  100 bits (249), Expect = 7e-20
 Identities = 68/172 (39%), Positives = 90/172 (52%), Gaps = 8/172 (4%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  D    + A  RQV GN Y+ E E    A   S  R  +++++E VR +AK+  Y
Sbjct: 319 PNASEEDLQGVLRAVYRQVLGNTYVMESERPTQA--ESLLRNGSISVREFVRRIAKSDLY 376

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + RF    S  R +ELN+KHLLGR P    E+  H      AGYD +ID+Y  + EY   
Sbjct: 377 KERFFNKASNNRFIELNFKHLLGRAPYNHGEIQEHFGLYHKAGYDVEIDSYIDSDEYIET 436

Query: 418 FGDNVVPSTVFRG----TYRSSEEFNRLCKSNAGPAAS--DKAKRGLNMLVT 555
           FG+N+VP   FRG    T +S+  F R+ K   G A S  D+A  G   LVT
Sbjct: 437 FGENIVP--YFRGFKYQTNQSAGGFPRMVKLWGGDAGSDTDRATGGQRTLVT 486

[24][TOP]
>UniRef100_B4AX65 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 7822
           RepID=B4AX65_9CHRO
          Length = 272

 Score =  102 bits (253), Expect = 3e-20
 Identities = 62/160 (38%), Positives = 90/160 (56%), Gaps = 4/160 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D +V + AA RQV GN +L   +    A   S  R  ++T+K+ VR +A++  Y
Sbjct: 25  PNRTEEDVEVVIRAAYRQVLGNEHLMSRDRLTSA--ESLLRNGDITVKDFVRAIAQSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           RS+F       R +ELNYKHLLGR P  Q E++ HT      GY+A+ID+Y  + EY   
Sbjct: 83  RSKFFQTLPQNRFIELNYKHLLGRAPYDQTEIAYHTDIYSEKGYEAEIDSYIDSPEYQES 142

Query: 418 FGDNVVPSTVFRGTYRSSEE--FNRLCKSNAGPAASDKAK 531
           FGDNVVP      T R+ +   F+R+ +   G A+SD+ +
Sbjct: 143 FGDNVVPYYRGFSTGRNQKTVGFSRIFQLYRGYASSDRTQ 182

[25][TOP]
>UniRef100_Q7NL64 Glr1262 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NL64_GLOVI
          Length = 824

 Score =  101 bits (252), Expect = 3e-20
 Identities = 60/159 (37%), Positives = 90/159 (56%), Gaps = 6/159 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P     +    + AA +Q+FGN Y+ E +   V +  S  R  +++++E VR LAK+  Y
Sbjct: 381 PNFGEAEVQAVIRAAYKQIFGNTYILEADR--VVIAESLLRNGSISVREFVRLLAKSDLY 438

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R RF    S  R +ELN+KH LGR P +QAE+  H      +GYDA+ID+Y  + EY  +
Sbjct: 439 RDRFFRTASNNRFIELNFKHFLGRAPYSQAEIGEHFNRYHKSGYDAEIDSYIDSDEYRRV 498

Query: 418 FGDNVVPSTVFRG----TYRSSEEFNRLCKSNAGPAASD 522
           FG+N VP   FRG      +++  F+++ +  AG A SD
Sbjct: 499 FGENTVP--YFRGFKYQVGQAARGFDQMQQLFAGDAGSD 535

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 61/159 (38%), Positives = 87/159 (54%), Gaps = 6/159 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + AA +Q+FGN Y+ E E   V    S  R  +++++E +R LAK+  Y
Sbjct: 108 PNFTEADVITVIRAAYKQLFGNTYILESER--VIQAESLLRNGSISVREFIRILAKSDLY 165

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + RF    S  R +ELN KHLLGR P  Q E++ H      +GYDA+ID+Y  + EY  +
Sbjct: 166 KERFFRCTSNNRFIELNLKHLLGRAPYNQGEIAEHLDRYCQSGYDAEIDSYIDSDEYRRV 225

Query: 418 FGDNVVPSTVFRG----TYRSSEEFNRLCKSNAGPAASD 522
           FG+N VP   FRG      +S+  F R+    +G A SD
Sbjct: 226 FGENTVP--YFRGFKYQVGQSAAAFERMRALYSGDAGSD 262

 Score = 94.0 bits (232), Expect = 7e-18
 Identities = 59/159 (37%), Positives = 83/159 (52%), Gaps = 6/159 (3%)
 Frame = +1

Query: 64   PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
            P     +    + A  +Q+FGN Y+ E +   V    S  R  ++ ++E VR LAK+  Y
Sbjct: 645  PNFGETELQAVIRATYKQLFGNTYILEADR--VVQAESLLRNGSINVREFVRLLAKSELY 702

Query: 244  RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
            + RF    S  R +EL +KHLLGR P  Q+E   H      +GYDA+ID+Y  + EY  +
Sbjct: 703  KERFFHCTSNNRFIELTFKHLLGRAPYNQSEFVEHLDRYQKSGYDAEIDSYIDSDEYRRV 762

Query: 418  FGDNVVPSTVFRG----TYRSSEEFNRLCKSNAGPAASD 522
            FG+N VP   FRG    T +++  F R  K   G A SD
Sbjct: 763  FGENTVP--YFRGFKYQTGQAAGVFERTLKLYGGDADSD 799

[26][TOP]
>UniRef100_Q7NL63 Phycoerythrin-associated linker protein n=1 Tax=Gloeobacter
           violaceus RepID=Q7NL63_GLOVI
          Length = 285

 Score =  101 bits (252), Expect = 3e-20
 Identities = 65/162 (40%), Positives = 92/162 (56%), Gaps = 7/162 (4%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  + +  + A  RQV GNAY+ E E   + V  SQ +   ++++E VR +AK+  Y
Sbjct: 24  PGRSVEEVETVIRAVYRQVLGNAYVMESER--LVVPESQLKLGEISVREFVREVAKSEFY 81

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R RF      YR +ELN+KHLLGR P + AE++ H++ L + G+DA+ID+Y    EY   
Sbjct: 82  RKRFFDAVPRYRAIELNFKHLLGRAPNSYAEMAEHSKILDAGGHDAEIDSYLDCDEYQDA 141

Query: 418 FGDNVVPSTVFRGTYRSSE-----EFNRLCKSNAGPAASDKA 528
           +G+  VP   +RG YRS       EF  + K   G A SDKA
Sbjct: 142 YGELTVP--FYRG-YRSQPGQTMVEFTHMFKLLRGAATSDKA 180

[27][TOP]
>UniRef100_B8HR76 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 7425
           RepID=B8HR76_CYAP4
          Length = 271

 Score =  101 bits (252), Expect = 3e-20
 Identities = 65/163 (39%), Positives = 93/163 (57%), Gaps = 8/163 (4%)
 Frame = +1

Query: 73  SAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSR 252
           +A D    + AA RQV GN +L + E    A   S  R   +++++ VR +A++  YR +
Sbjct: 28  TADDVQAVIRAAYRQVLGNEHLMQSERLTSA--ESLLRQGQISVRDFVRAIAQSDLYREK 85

Query: 253 FMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGD 426
           F+ PN   R +ELNYKHLLGR P  +AE++ H    MS GY+A+I++Y  + EY   FG+
Sbjct: 86  FLYPNFQTRFIELNYKHLLGRAPYDEAEIAYHVDLYMSQGYEAEINSYIDSPEYQQNFGE 145

Query: 427 NVVPSTVFRGTYRSSEE---FNRLCKSNAGPAASDKA---KRG 537
           NVVP      T R  +    F+RL +   G A SD+A   KRG
Sbjct: 146 NVVPYYRDFQTTRPGQRTVGFSRLLQLYRGYANSDRAQGEKRG 188

[28][TOP]
>UniRef100_B2J9I9 Phycobilisome linker polypeptide, CpeE n=1 Tax=Nostoc punctiforme
           PCC 73102 RepID=B2J9I9_NOSP7
          Length = 252

 Score =  101 bits (252), Expect = 3e-20
 Identities = 62/163 (38%), Positives = 91/163 (55%), Gaps = 6/163 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  +    + A  +QV GNA+L E E   +A   SQ R R ++++E V  +AK+  Y
Sbjct: 15  PNTSESELQTLIRAVYKQVLGNAHLLESER--LATAESQLRDRKISVREFVNIVAKSELY 72

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGPT-QAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           +S F + +S YR +ELN+KHLLGR P  QAE++ H +     GYDA+I++Y  + EY   
Sbjct: 73  QSLFFSSSSQYRFIELNFKHLLGRAPADQAEIAEHVRIYNEQGYDAEIESYIDSQEYQQN 132

Query: 418 FGDNVVPSTVFRGTYR----SSEEFNRLCKSNAGPAASDKAKR 534
           FG+N+VP    R T       +  FNR      G A+SD  ++
Sbjct: 133 FGENIVPYP--RSTSSQIGIKNVTFNRTFSLLRGVASSDSDRK 173

[29][TOP]
>UniRef100_D0CKB4 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. WH 8109
           RepID=D0CKB4_9SYNE
          Length = 548

 Score =  101 bits (251), Expect = 4e-20
 Identities = 64/154 (41%), Positives = 89/154 (57%), Gaps = 7/154 (4%)
 Frame = +1

Query: 82  DGDVAVAAAIR----QVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRS 249
           DG   +AA IR    QV GN +L E E   V    S+F    L+ +E VR +  +A Y+ 
Sbjct: 304 DGPDQLAALIRSTYKQVMGNPHLMEFER--VISAESKFIDGYLSTREFVRAVGLSAEYKR 361

Query: 250 RFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFG 423
           RF   ++ YR +ELN+KH LGR P +QAE+S HT+ L   GY+A+I +Y   AEY + FG
Sbjct: 362 RFFETSAPYRFIELNFKHFLGRAPRSQAEISEHTKILAEGGYEAEISSYVDSAEYQNTFG 421

Query: 424 DNVVP-STVFRGTYRSSEEFNRLCKSNAGPAASD 522
           ++ VP + +   + RS  +FNR      G AASD
Sbjct: 422 EDTVPFARILTESGRSQVDFNRQLSLAEGYAASD 455

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 51/119 (42%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           +  ++A+ RQVFGNA++ + E    + L +Q R   LT++E VRGLAK++ Y+ RF    
Sbjct: 76  ETVISASYRQVFGNAHVMDFERC--SELEAQLRDGRLTVREFVRGLAKSSFYKDRFFRSV 133

Query: 268 STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP 438
           +  R VEL +KHLLGR P TQAE+SA        G++  +D+    AEY  +FG +VVP
Sbjct: 134 APQRGVELTFKHLLGRAPETQAEISAKIALQAEHGHNGLVDSIVDSAEYLEVFGSDVVP 192

[30][TOP]
>UniRef100_Q7U4R4 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. WH 8102
           RepID=Q7U4R4_SYNPX
          Length = 548

 Score =  100 bits (250), Expect = 6e-20
 Identities = 61/157 (38%), Positives = 90/157 (57%), Gaps = 3/157 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + +A +QV GN +L E E A  A   S+F    L+ +E VR +  +A Y+ RF   N+ Y
Sbjct: 313 IRSAYKQVMGNPHLMEFERALSA--ESKFIDGYLSTREFVRAVGLSAEYKRRFFETNAPY 370

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP-STV 447
           R +ELN+KH LGR P +QAE+S HT+ L   GY+A+I +Y    EY S+FG++ +P + +
Sbjct: 371 RFIELNFKHFLGRAPQSQAEISEHTKILAEGGYEAEICSYVDSVEYQSIFGEDTIPYARI 430

Query: 448 FRGTYRSSEEFNRLCKSNAGPAASDKAKRGLNMLVTV 558
                RS   FNR      G AASD      +++ +V
Sbjct: 431 LTENGRSQVAFNRHLSLAEGFAASDTVLSSSSLVSSV 467

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 54/119 (45%), Positives = 72/119 (60%), Gaps = 2/119 (1%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           +  +AA+ RQVFGNA++   E      L +Q R   LT+++ +RGLAK++ Y+SRF    
Sbjct: 77  ETVIAASYRQVFGNAHVMNFERC--TELEAQLRDGRLTVRDFIRGLAKSSFYKSRFFNSV 134

Query: 268 STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP 438
           +  R VELN KHLLGR P TQAE+SA        G  A ID+    AEY  +FG +VVP
Sbjct: 135 APQRGVELNVKHLLGRAPETQAEISAMITLQAEQGQGALIDSIVDSAEYLEVFGSDVVP 193

[31][TOP]
>UniRef100_B8HR75 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 7425
           RepID=B8HR75_CYAP4
          Length = 289

 Score =  100 bits (249), Expect = 7e-20
 Identities = 60/161 (37%), Positives = 89/161 (55%), Gaps = 5/161 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  + D+ + A  RQ+ GN YL + E    +   S    R +T++E VR +AK+  Y
Sbjct: 25  PTATREEVDLVIRAVYRQLLGNDYLMQSERLTTS--ESLLCDRKITVREFVRQVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSL 417
           +++F   +   R++ELN KHLLGR P  + E+S H     + GYDADID+Y   AEY   
Sbjct: 83  KNKFFYNSFQSRVIELNIKHLLGRAPYDETEISTHLDIYQTKGYDADIDSYIDSAEYQQY 142

Query: 418 FGDNVVP---STVFRGTYRSSEEFNRLCKSNAGPAASDKAK 531
           FG+N+VP     V  G  + +  F RL +   G A SD+A+
Sbjct: 143 FGENIVPYYRDLVTTGVGQRTVGFTRLFQLYRGYANSDRAQ 183

[32][TOP]
>UniRef100_B4WGJ1 Phycobilisome Linker polypeptide domain protein n=1
           Tax=Synechococcus sp. PCC 7335 RepID=B4WGJ1_9SYNE
          Length = 293

 Score =  100 bits (249), Expect = 7e-20
 Identities = 55/127 (43%), Positives = 80/127 (62%), Gaps = 2/127 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LS+ D +  ++   RQV GNAY+ E E   ++V  SQF+    +++E VR +AK+  Y
Sbjct: 27  PGLSSEDLEGIISTVYRQVLGNAYVMESER--LSVPESQFKLGEFSVREFVRAVAKSDLY 84

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGPTQ-AEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           RSRF      YR  ELN++HLLGR P    E+ AH+  L + G++ADID+Y  + EY + 
Sbjct: 85  RSRFFEGCPRYRYTELNFRHLLGRAPNDYDEMKAHSNILDAEGFEADIDSYIDSDEYQNT 144

Query: 418 FGDNVVP 438
           FG+N+VP
Sbjct: 145 FGENIVP 151

[33][TOP]
>UniRef100_B4B7Y3 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 7822
           RepID=B4B7Y3_9CHRO
          Length = 292

 Score =  100 bits (249), Expect = 7e-20
 Identities = 57/146 (39%), Positives = 84/146 (57%), Gaps = 8/146 (5%)
 Frame = +1

Query: 25  PATYSSVDATIDAPRLSAWDG------DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFR 186
           PA+   V    D P +    G      ++ + A  RQV GNAY+ E E A V    S+ +
Sbjct: 5   PASELGVSLFEDTPPIELTPGRSLEEVEIVIRAVYRQVLGNAYVMESERATVP--ESKLK 62

Query: 187 GRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGPTQ-AEVSAHTQTLMS 363
              L+++E VR +AK+  YRSRF   +  YR +ELN+KHLLGR P    E+  H+  L +
Sbjct: 63  QGELSVREFVRAVAKSDLYRSRFFETSPRYRFIELNFKHLLGRAPDDLEEMRKHSTILDT 122

Query: 364 AGYDADIDTYFGA-EYDSLFGDNVVP 438
            G++A+ID+Y  + EY S +G+N+VP
Sbjct: 123 EGFEAEIDSYLDSDEYQSAYGENIVP 148

[34][TOP]
>UniRef100_B4WG61 Phycobilisome Linker polypeptide domain protein n=1
           Tax=Synechococcus sp. PCC 7335 RepID=B4WG61_9SYNE
          Length = 291

 Score =  100 bits (248), Expect = 1e-19
 Identities = 59/160 (36%), Positives = 91/160 (56%), Gaps = 4/160 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P+ S+ D    + AA RQV GN YL   E   ++ L S      L++++ VR +AK+  Y
Sbjct: 25  PKASSDDAQAVIYAAYRQVLGNDYLMRSER--LSALESLVTNGTLSVRDFVRAIAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           +++F+ PN   R++ELN KHLLGR P  ++EV  H     + G++ADID+Y  + EY++ 
Sbjct: 83  KTKFLYPNFQTRVIELNLKHLLGRAPYDESEVIEHLDRYQNEGFEADIDSYIDSEEYETN 142

Query: 418 FGDNVVPSTVFRGTYRSSE--EFNRLCKSNAGPAASDKAK 531
           FGD++VP      T    +   F R+     G A SD+A+
Sbjct: 143 FGDSIVPYCRGFSTQNGQKIAGFTRMFSLYRGYANSDRAQ 182

[35][TOP]
>UniRef100_Q3AMG3 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. CC9605
           RepID=Q3AMG3_SYNSC
          Length = 549

 Score = 99.8 bits (247), Expect = 1e-19
 Identities = 63/154 (40%), Positives = 89/154 (57%), Gaps = 7/154 (4%)
 Frame = +1

Query: 82  DGDVAVAAAIR----QVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRS 249
           DG   +AA IR    QV GN +L E E   V    S+F    L+ +E VR +  +A Y+ 
Sbjct: 305 DGPDQLAALIRSTYKQVMGNPHLMEFER--VISAESKFIDGYLSTREFVRAVGLSAEYKR 362

Query: 250 RFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFG 423
           RF   ++ YR +ELN+KH LGR P +QAE+S HT+ L   GY+A+I +Y  + EY + FG
Sbjct: 363 RFFETSAPYRFIELNFKHFLGRAPRSQAEISEHTKILAEGGYEAEISSYVDSQEYQNTFG 422

Query: 424 DNVVP-STVFRGTYRSSEEFNRLCKSNAGPAASD 522
           ++ VP + +   + RS  +FNR      G AASD
Sbjct: 423 EDTVPFARILTESGRSQVDFNRQLSLAEGYAASD 456

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 53/119 (44%), Positives = 76/119 (63%), Gaps = 2/119 (1%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           +  ++A+ RQVFGNA++ + E    + L +Q R   LT+++ VRGLAK++ Y+ RF    
Sbjct: 77  ETVISASYRQVFGNAHVMDFERC--SELEAQLRDGRLTVRDFVRGLAKSSFYKDRFFRSV 134

Query: 268 STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP 438
           +  R VELN+KHLLGR P TQAE+SA    L   G+D  +D+    AEY  +FG +VVP
Sbjct: 135 APQRGVELNFKHLLGRAPETQAEISAKISLLAEHGHDGLVDSIVDSAEYLEVFGSDVVP 193

[36][TOP]
>UniRef100_Q2JT29 Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated,
           rod n=1 Tax=Synechococcus sp. JA-3-3Ab
           RepID=Q2JT29_SYNJA
          Length = 285

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S    +  + A  RQV GN +LF  +  ++A   S  R  +LT++E VR +AK+ AY
Sbjct: 25  PNASQDQLNAILRAIYRQVLGNDHLFGADRKELASAESLLRRGSLTVREFVRLIAKSEAY 84

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGPTQ-AEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + RF+ PNS  R +ELN+KHLLGR PT   +++ H     + G+ A+ID+Y  + EY   
Sbjct: 85  KRRFLYPNSQTRAIELNFKHLLGRAPTSPKDIARHLDIYHAGGHSAEIDSYIDSPEYLEA 144

Query: 418 FGDNVVPSTVFRG-TYR---SSEEFNRLCKSNAGPAASDKAK 531
           FGDN+VP    RG  YR   ++ +F  L     G A +D+++
Sbjct: 145 FGDNIVPYP--RGFEYRKAHTTRDFTNLFALYGGYANNDRSQ 184

[37][TOP]
>UniRef100_B9YI78 Phycobilisome linker polypeptide n=1 Tax='Nostoc azollae' 0708
           RepID=B9YI78_ANAAZ
          Length = 286

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S    +  + A  RQV GN Y+   +    A   S  R R+LT++E VR +AK+  Y
Sbjct: 25  PNSSREQVEAVIKAVYRQVLGNDYILASDRLISA--ESLLRDRHLTVREFVRSVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           +++F   +   RL+ELNYKHLLGR P  ++EV+ H    ++ GYDA+ID+Y  + EY + 
Sbjct: 83  KAKFFHNSFQTRLIELNYKHLLGRAPYDESEVTYHLDLYINEGYDAEIDSYIDSQEYQNS 142

Query: 418 FGDNVVPSTVFRG----TYRSSEEFNRLCKSNAGPAASDKAK 531
           FG+NVVP   +RG      +++  F R+ +   G A SD A+
Sbjct: 143 FGENVVP--YYRGFDFQAGQNAAGFTRMFRLYRGYANSDTAQ 182

[38][TOP]
>UniRef100_Q7NL61 Phycoerythrin-associated linker protein n=1 Tax=Gloeobacter
           violaceus RepID=Q7NL61_GLOVI
          Length = 254

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 66/172 (38%), Positives = 92/172 (53%), Gaps = 5/172 (2%)
 Frame = +1

Query: 34  YSSVDATIDA-PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKE 210
           +++  ATI+  P  +  D    V A  +QV GN +L E E    A   S  R  ++T+++
Sbjct: 4   WATEQATIELLPNATEDDLQTVVRAVYKQVLGNEHLMESERLTTA--ESLLRNGDITVRQ 61

Query: 211 LVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGPT-QAEVSAHTQTLMSAGYDADID 387
            V  +AK+  Y+S F    S YR +ELN+KHLLGR P  Q E+SAH Q     GY+A+ID
Sbjct: 62  FVSLVAKSDLYQSLFFETTSQYRFIELNFKHLLGRAPVDQTEISAHVQIYNQDGYEAEID 121

Query: 388 TYFGA-EYDSLFGDNVV--PSTVFRGTYRSSEEFNRLCKSNAGPAASDKAKR 534
           +Y  + EY   FGD+VV  P  V       +  FNR+     G A+SD   R
Sbjct: 122 SYIDSDEYIENFGDSVVPYPRAVRTQVGLKNVGFNRMFALMRGAASSDGDNR 173

[39][TOP]
>UniRef100_B2J4C3 Phycobilisome linker polypeptide CpcC n=1 Tax=Nostoc punctiforme
           PCC 73102 RepID=B2J4C3_NOSP7
          Length = 289

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 63/162 (38%), Positives = 92/162 (56%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  D +  +AA  RQV GN Y+   +    A   S  R    T++E VR +AK+  Y
Sbjct: 25  PNASKEDIERVIAAVYRQVLGNNYILASDRLTSA--ESILRDGKNTVQEFVRQVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           +S+F   N   R++ELNYKHLLGR P  ++EV  H     + GY+ADID+Y  + EY S 
Sbjct: 83  KSKFFYDNFQTRVIELNYKHLLGRAPYDESEVVYHLDLYQNKGYEADIDSYIDSPEYQSS 142

Query: 418 FGDNVVPSTVFRG----TYRSSEEFNRLCKSNAGPAASDKAK 531
           FG+N+VP   +RG    T + +  F+R+ +   G A+SD ++
Sbjct: 143 FGENIVP--YYRGFNTQTGQKTVGFSRIFQLYRGYASSDTSQ 182

[40][TOP]
>UniRef100_B7KLW8 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 7424
           RepID=B7KLW8_CYAP7
          Length = 292

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 56/146 (38%), Positives = 83/146 (56%), Gaps = 8/146 (5%)
 Frame = +1

Query: 25  PATYSSVDATIDAPRLSAWDG------DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFR 186
           PA+   V    D P +    G      ++ + A  RQV GNAY+ E E A  A   S+ +
Sbjct: 5   PASELGVSRFEDTPPIELIPGRSLEEVEIVINAVYRQVLGNAYVMESERAITA--ESKLK 62

Query: 187 GRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGPTQ-AEVSAHTQTLMS 363
              L+++E VR +AK+  YRSRF   +  YR +ELN+KHLLGR P    E+  H+  L +
Sbjct: 63  QGELSVREFVRAVAKSELYRSRFFETSPRYRFIELNFKHLLGRAPDDLEEMRKHSTILDT 122

Query: 364 AGYDADIDTYFGA-EYDSLFGDNVVP 438
            G++A+ID+Y  + EY   +G+N+VP
Sbjct: 123 EGFEAEIDSYLDSDEYQKAYGENIVP 148

[41][TOP]
>UniRef100_Q2VA02 CpcI n=1 Tax=Arthrospira platensis Sp-9 RepID=Q2VA02_SPIPL
          Length = 288

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 65/162 (40%), Positives = 90/162 (55%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  +   A+ A  RQ+ GN YL   E    A   S     ++T++ELVR +AK+  Y
Sbjct: 25  PNWSRDNAQEAIRAIYRQLLGNDYLMSSERLTSA--ESLLCDGSITVRELVRCVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + +F  PN   R++ELNYKHLLGR P  ++EV  H     + GYDADID+Y  + EY   
Sbjct: 83  KKKFFYPNFQTRVIELNYKHLLGRAPYDESEVVFHLDLYQNEGYDADIDSYIDSPEYLES 142

Query: 418 FGDNVVPSTVFRG--TYRSSEE--FNRLCKSNAGPAASDKAK 531
           FG+N+VP   +RG  T R  +   F R+ +   G A SD A+
Sbjct: 143 FGENIVP--YYRGFETQRGQKTVGFTRMFRLYRGYANSDSAQ 182

[42][TOP]
>UniRef100_A0YJ99 Phycocyanin-associated rod linker protein n=1 Tax=Lyngbya sp. PCC
           8106 RepID=A0YJ99_9CYAN
          Length = 289

 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 59/149 (39%), Positives = 86/149 (57%), Gaps = 4/149 (2%)
 Frame = +1

Query: 103 AAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRL 282
           A  RQV GN Y+ + E    A   S  R  NLT+++ VR +A +  Y+ +F  PN+  R 
Sbjct: 43  ATYRQVLGNEYVMKSERLTSA--ESLLRQGNLTVRDFVRAVALSELYKKKFFFPNNNQRF 100

Query: 283 VELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPSTVFRG 456
           VELN+KHLLGR P  + E++ HT+ +   GYDA+I+ YF   EY++ FGDN+VP  V   
Sbjct: 101 VELNFKHLLGRPPHDEQELAFHTRLVEDKGYDAEINYYFESEEYENKFGDNIVPYYVGFQ 160

Query: 457 TYRSSEE--FNRLCKSNAGPAASDKAKRG 537
               S    F+R+ +   G A +D+ + G
Sbjct: 161 VLTGSRTVGFSRMFQLYRGYANNDRGQVG 189

[43][TOP]
>UniRef100_Q7NM19 Phycocyanin-associated rod linker protein n=1 Tax=Gloeobacter
           violaceus RepID=Q7NM19_GLOVI
          Length = 219

 Score = 97.4 bits (241), Expect = 6e-19
 Identities = 61/160 (38%), Positives = 86/160 (53%), Gaps = 7/160 (4%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           PR    +    +A A +QVFGN ++ E E   +    S  R R+++++E VR LAK+  Y
Sbjct: 39  PRAGEAEVQAVIAVAYKQVFGNIHVMESER--IVSAESLLRNRSISVREFVRLLAKSDLY 96

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           +  F    S  R +ELN+KHLLGR P   +E+  H     S GYDA+ID+Y  + EY   
Sbjct: 97  KESFFHCTSNNRFIELNFKHLLGRAPYNHSEIIEHLDRYQSQGYDAEIDSYIDSDEYVKT 156

Query: 418 FGDNVVPSTVFRG-----TYRSSEEFNRLCKSNAGPAASD 522
           FG+NVVP    RG       +S   F R+ +   G A+SD
Sbjct: 157 FGENVVP--YHRGFKSQVGQQSVAAFERMIRLFGGDASSD 194

[44][TOP]
>UniRef100_B7K9E5 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 7424
           RepID=B7K9E5_CYAP7
          Length = 291

 Score = 97.4 bits (241), Expect = 6e-19
 Identities = 62/162 (38%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + A  RQV GN Y+ + E  + A   S      +T++E VR +AK+  Y
Sbjct: 25  PNWTKEDAQGIIRAVYRQVLGNDYIMKSERLNSA--ESLLCNGVITVREFVRAVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSL 417
           +S+F   N   R++ELNYKHLLGR P  ++EV  H     + GY+ADID+Y    EY   
Sbjct: 83  KSKFFYNNFQTRVIELNYKHLLGRAPYDESEVIYHLDLYENKGYEADIDSYIDSVEYQEN 142

Query: 418 FGDNVVPSTVFRG----TYRSSEEFNRLCKSNAGPAASDKAK 531
           FGDN+VP   +RG    T + +  F R+ +   G A SD+A+
Sbjct: 143 FGDNIVP--YYRGFATQTGQKTVGFTRMFRLYRGYANSDRAQ 182

[45][TOP]
>UniRef100_B2BN91 CpcH n=1 Tax=Arthrospira platensis Sp-14 RepID=B2BN91_SPIPL
          Length = 271

 Score = 97.4 bits (241), Expect = 6e-19
 Identities = 62/160 (38%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + AA RQV GN +L + E    A   S  R   +T+++ VR LA +  Y
Sbjct: 25  PNFTEGDVQAVIWAAYRQVMGNEHLMQRERLTSA--ESLLRQGRITVRDFVRALAVSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F   NS  R +ELNYKHLLGR P  ++E++ H       GY+A+I++Y  + EY   
Sbjct: 83  RKKFFYGNSQVRFIELNYKHLLGRAPYDESEIAFHVDLYNEEGYEAEINSYLDSPEYLES 142

Query: 418 FGDNVVPSTVFRGTYRS--SEEFNRLCKSNAGPAASDKAK 531
           FG+NVVP      T R   S  FNR+ +   G A SD+A+
Sbjct: 143 FGENVVPYYRGFATQRGQWSVGFNRMFQLYRGYANSDRAQ 182

[46][TOP]
>UniRef100_B2BN71 CpcI n=1 Tax=Arthrospira platensis Sp-6 RepID=B2BN71_SPIPL
          Length = 288

 Score = 97.4 bits (241), Expect = 6e-19
 Identities = 64/162 (39%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  +    + A  RQ+ GN YL   E    A   S     ++T++ELVR +AK+  Y
Sbjct: 25  PNWSRDNAQEVIRAVYRQLLGNDYLMSSERLTSA--ESLLCDGSITVRELVRCVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + +F  PN   R++ELNYKHLLGR P  ++EV  H     + GYDADID+Y  + EY   
Sbjct: 83  KKKFFYPNFQTRVIELNYKHLLGRAPYDESEVVFHLDLYQNEGYDADIDSYIDSPEYLEC 142

Query: 418 FGDNVVPSTVFRG--TYRSSEE--FNRLCKSNAGPAASDKAK 531
           FG+N+VP   +RG  T R  +   F R+ +   G A SD A+
Sbjct: 143 FGENIVP--YYRGFETQRGQKTVGFTRMFRLYRGYANSDSAQ 182

[47][TOP]
>UniRef100_Q9S431 Rod linker polypeptide CpcI n=1 Tax=Arthrospira platensis
           RepID=Q9S431_SPIPL
          Length = 288

 Score = 97.1 bits (240), Expect = 8e-19
 Identities = 64/162 (39%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  +    + A  RQ+ GN YL   E    A   S     ++T++ELVR +AK+  Y
Sbjct: 25  PNWSRDNAQEVIRAVYRQLLGNDYLMSSERLTSA--ESLLCDGSITVRELVRCVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + +F  PN   R++ELNYKHLLGR P  ++EV  H     + GYDADID+Y  + EY   
Sbjct: 83  KKKFFYPNFQTRVIELNYKHLLGRAPYDESEVVFHLDLYQNEGYDADIDSYIDSPEYLES 142

Query: 418 FGDNVVPSTVFRG--TYRSSEE--FNRLCKSNAGPAASDKAK 531
           FG+N+VP   +RG  T R  +   F R+ +   G A SD A+
Sbjct: 143 FGENIVP--YYRGFETQRGQKTVGFTRMWRLYRGYANSDSAQ 182

[48][TOP]
>UniRef100_Q2V9Z6 CpcI n=1 Tax=Arthrospira platensis Sp-11 RepID=Q2V9Z6_SPIPL
          Length = 288

 Score = 97.1 bits (240), Expect = 8e-19
 Identities = 63/158 (39%), Positives = 86/158 (54%), Gaps = 7/158 (4%)
 Frame = +1

Query: 79  WDGDVA---VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRS 249
           W  D A   + A  RQ+ GN YL   E    A   S     ++T++E VR +AK+  Y+ 
Sbjct: 27  WGRDNAQEVIRAVYRQLLGNDYLMSSERLTSA--ESLLCDGSITVREFVRCVAKSELYKK 84

Query: 250 RFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFG 423
           +F  PN   R++ELNYKHLLGR P  ++EV  H     + GYDADID+Y  + EY   FG
Sbjct: 85  KFFYPNFQTRVIELNYKHLLGRAPYDESEVVFHLDLYQNEGYDADIDSYIDSPEYLESFG 144

Query: 424 DNVVPSTVFRGTYRSSEE--FNRLCKSNAGPAASDKAK 531
           +N+VP     GT R  +   F R+ +   G A SD A+
Sbjct: 145 ENIVPYYRGFGTQRGQKTVGFTRMFRLYRGYANSDSAQ 182

[49][TOP]
>UniRef100_B2BNA4 CpcI n=6 Tax=Arthrospira RepID=B2BNA4_SPIPL
          Length = 288

 Score = 97.1 bits (240), Expect = 8e-19
 Identities = 64/162 (39%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  +    + A  RQ+ GN YL   E    A   S     ++T++ELVR +AK+  Y
Sbjct: 25  PNWSRDNAQEVIRAVYRQLLGNDYLMSSERLTSA--ESLLCDGSITVRELVRCVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + +F  PN   R++ELNYKHLLGR P  ++EV  H     + GYDADID+Y  + EY   
Sbjct: 83  KKKFFYPNFQTRVIELNYKHLLGRAPYDESEVVFHLDLYQNEGYDADIDSYIDSPEYLES 142

Query: 418 FGDNVVPSTVFRG--TYRSSEE--FNRLCKSNAGPAASDKAK 531
           FG+N+VP   +RG  T R  +   F R+ +   G A SD A+
Sbjct: 143 FGENIVP--YYRGFETQRGQKTVGFTRMFRLYRGYANSDSAQ 182

[50][TOP]
>UniRef100_B2BNA1 CpcI n=1 Tax=Arthrospira platensis Sp-17 RepID=B2BNA1_SPIPL
          Length = 288

 Score = 97.1 bits (240), Expect = 8e-19
 Identities = 64/162 (39%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  +    + A  RQ+ GN YL   E    A   S F   ++T++E VR +AK+  Y
Sbjct: 25  PNWSRENAHEVIRAVYRQLLGNHYLMSSERLISA--ESLFCDGSITVREFVRCVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + +F  PN   R++ELNYKHLLGR P  ++EV  H     + GYDADID+Y  + EY   
Sbjct: 83  KKKFFYPNFQTRVIELNYKHLLGRAPYDESEVVFHLDLYQNEGYDADIDSYIDSPEYLES 142

Query: 418 FGDNVVPSTVFRG--TYRSSEE--FNRLCKSNAGPAASDKAK 531
           FG+N+VP   +RG  T R  +   F R+ +   G A SD A+
Sbjct: 143 FGENIVP--YYRGFETQRGQKTVGFTRMFRLYRGYANSDSAQ 182

[51][TOP]
>UniRef100_B2BN95 CpcI n=1 Tax=Arthrospira platensis Sp-15 RepID=B2BN95_SPIPL
          Length = 288

 Score = 97.1 bits (240), Expect = 8e-19
 Identities = 64/162 (39%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  +    + A  RQ+ GN YL   E    A   S F   ++T++E VR +AK+  Y
Sbjct: 25  PNWSRENAHEVIRAVYRQLLGNHYLMSSERLISA--ESLFCDGSITVREFVRCVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + +F  PN   R++ELNYKHLLGR P  ++EV  H     + GYDADID+Y  + EY   
Sbjct: 83  KKKFFYPNFQTRVIELNYKHLLGRAPYDESEVVFHLDLYQNEGYDADIDSYIDSPEYLES 142

Query: 418 FGDNVVPSTVFRG--TYRSSEE--FNRLCKSNAGPAASDKAK 531
           FG+N+VP   +RG  T R  +   F R+ +   G A SD A+
Sbjct: 143 FGENIVP--YYRGFETQRGQKTVGFTRMFRLYRGYANSDSAQ 182

[52][TOP]
>UniRef100_B7K9E6 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 7424
           RepID=B7K9E6_CYAP7
          Length = 272

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 59/159 (37%), Positives = 92/159 (57%), Gaps = 4/159 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D +V + AA RQV GN +L   +    A   S  R  ++++K+ VR +A++  Y
Sbjct: 25  PNWTEEDVEVVIRAAYRQVLGNEHLMSRDRLTSA--ESLLRNGDISVKDFVRAIAQSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           +++F       RL+ELNYKHLLGR P  QAE++ HT      GY+A+I++Y  + EY   
Sbjct: 83  QNKFFHTLPQNRLIELNYKHLLGRAPYDQAEIAYHTDLYNQKGYEAEINSYIDSPEYQEN 142

Query: 418 FGDNVVPSTVFRGTYRSSEE--FNRLCKSNAGPAASDKA 528
           FGD++VP      T R+ +   F+R+ +   G A+SD+A
Sbjct: 143 FGDHIVPYYRGFATGRNQKTVGFSRIFQLYRGYASSDRA 181

[53][TOP]
>UniRef100_B7JX69 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 8801
           RepID=B7JX69_CYAP8
          Length = 273

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 58/154 (37%), Positives = 89/154 (57%), Gaps = 4/154 (2%)
 Frame = +1

Query: 82  DGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMT 261
           + ++A+ AA RQV GN +L   E    A   S  R  ++++K+ VR +A +  YR++F  
Sbjct: 31  EANLAIRAAYRQVLGNEHLMSRERLTSA--ESLLRNGSISVKDFVRAIALSELYRNKFFH 88

Query: 262 PNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVV 435
            N   R +ELNYKHLLGR P  QAE++ HT      GY+++I++Y  + EY   FGD +V
Sbjct: 89  SNPQNRFIELNYKHLLGRAPYDQAEIAYHTDLYNQEGYESEINSYIDSPEYQEHFGDLIV 148

Query: 436 PSTVFRGTYRSSEE--FNRLCKSNAGPAASDKAK 531
           P      T R+ +   F+R+ +   G A SD+A+
Sbjct: 149 PFYRGFATERNQKTVGFSRIFQVYRGYATSDRAQ 182

[54][TOP]
>UniRef100_B2J4C2 Phycobilisome linker polypeptide CpcC2 n=1 Tax=Nostoc punctiforme
           PCC 73102 RepID=B2J4C2_NOSP7
          Length = 270

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 6/156 (3%)
 Frame = +1

Query: 82  DGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMT 261
           D  V + AA RQV GNAYL E E  + A   S  +   ++++  V+ +A++  YR +F  
Sbjct: 31  DVAVVIRAAYRQVLGNAYLLEGERLESA--ESLLQQGLISVRGFVQAIAQSELYRDKFFY 88

Query: 262 PNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVV 435
            NS  R +ELNYKHLLGR P  ++E+S H +   S GY+A+I++Y  + EY   FG+N+V
Sbjct: 89  SNSQTRFIELNYKHLLGRAPEDESEISYHVELYNSQGYEAEINSYIDSLEYQESFGENIV 148

Query: 436 PSTVFRG----TYRSSEEFNRLCKSNAGPAASDKAK 531
           P   +RG      + +  ++RL +   G A SD+A+
Sbjct: 149 P--YYRGFKSQVGQKNVGYSRLFQLYRGYANSDRAQ 182

[55][TOP]
>UniRef100_B4B7Y4 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 7822
           RepID=B4B7Y4_9CHRO
          Length = 255

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 60/150 (40%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + A  +QV GN ++ E E    A   SQ    N+T++E VR +AK+  YR R+    + Y
Sbjct: 24  IRAVYKQVLGNPHVMESERLVSA--ESQLTNGNITVREFVRQVAKSDFYRRRYFEACTPY 81

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVPSTVF 450
           R VELN+KHLLGR P +QAEVS H +  +  GYDA+ID+Y  + EY   FGD +VP   +
Sbjct: 82  RFVELNFKHLLGRAPSSQAEVSEHIRRSIEEGYDAEIDSYIDSQEYQDNFGDTIVP--YY 139

Query: 451 RGTY----RSSEEFNRLCKSNAGPAASDKA 528
           +G      +    +NR      G A  D A
Sbjct: 140 KGAKTTLGQKQVNYNRTLSLYQGYAGVDSA 169

[56][TOP]
>UniRef100_B2BN70 CpcH n=1 Tax=Arthrospira platensis Sp-6 RepID=B2BN70_SPIPL
          Length = 271

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 61/160 (38%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + AA RQV GN +L + E    A   S  R   +T+++ VR LA +  Y
Sbjct: 25  PNFTEGDVQAVIWAAYRQVMGNEHLMQRERLTSA--ESLLRQGEITVRDFVRALAVSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F   NS  R +ELNYKHLLGR P  ++E++ H       GY+A+I++Y  + EY   
Sbjct: 83  RKKFFYGNSQVRFIELNYKHLLGRAPYDESEIAFHVDLYNEEGYEAEINSYLDSPEYLET 142

Query: 418 FGDNVVPSTVFRGTYRS--SEEFNRLCKSNAGPAASDKAK 531
           FG+NVVP      T R   +  FNR+ +   G A SD+A+
Sbjct: 143 FGENVVPYYRGFATQRGQWTVGFNRMFQLYRGYANSDRAQ 182

[57][TOP]
>UniRef100_P73204 Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated,
           rod 2 n=1 Tax=Synechocystis sp. PCC 6803
           RepID=PYR2_SYNY3
          Length = 273

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 61/154 (39%), Positives = 87/154 (56%), Gaps = 6/154 (3%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           D  + A  RQV GN +L  +E    A   S  RGR +++++ VR +A +  YR +F   N
Sbjct: 33  DAVILAVYRQVLGNDHLMSQERLTSA--ESLLRGREISVRDFVRAVALSEVYRQKFFHSN 90

Query: 268 STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPS 441
              R +ELNYKHLLGR P  Q+E++ HT      GY+A+I++Y    EY   FGD VVP 
Sbjct: 91  PQNRFIELNYKHLLGRAPYDQSEIAFHTDLYHQGGYEAEINSYIDSVEYTENFGDWVVP- 149

Query: 442 TVFRG--TYRSSEE--FNRLCKSNAGPAASDKAK 531
             FRG  T R+ +   F+R  +   G A SD+++
Sbjct: 150 -YFRGFATQRNQKTVGFSRSFQVYRGYATSDRSQ 182

[58][TOP]
>UniRef100_B7KLW7 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 7424
           RepID=B7KLW7_CYAP7
          Length = 255

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 65/163 (39%), Positives = 87/163 (53%), Gaps = 6/163 (3%)
 Frame = +1

Query: 58  DAPRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTA 237
           D  +LSA      + A  +QV GN ++ E E    A   SQ     +T++E VR +AK+ 
Sbjct: 16  DPEQLSA-----VIRAVYKQVLGNPHVMESERLVSA--ESQLTNGTITVREFVRQVAKSD 68

Query: 238 AYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYD 411
            YR R+    + YR VELN+KHLLGR P +QAEVS H    +  GYDA+ID+Y   AEY 
Sbjct: 69  FYRRRYFESCTPYRFVELNFKHLLGRAPSSQAEVSEHICRSIEEGYDAEIDSYIDSAEYQ 128

Query: 412 SLFGDNVVPSTVFRGTYRS----SEEFNRLCKSNAGPAASDKA 528
             FG+N+VP   ++G   S       +NR      G A  D A
Sbjct: 129 DNFGENIVP--YYKGAKTSPGTKQVNYNRTLSLYQGYAGVDSA 169

[59][TOP]
>UniRef100_B2BNA3 CpcH n=1 Tax=Arthrospira platensis Sp-11 RepID=B2BNA3_SPIPL
          Length = 271

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 61/160 (38%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + AA RQV GN +L + E    A   S  R   +T+++ VR LA +  Y
Sbjct: 25  PNFTEGDVQAVIWAAYRQVMGNEHLMQRERLTSA--ESLLRQGEITVRDFVRALAVSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F   NS  R +ELNYKHLLGR P  ++E++ H       GY+A+I++Y  + EY   
Sbjct: 83  RKKFFYGNSQVRFIELNYKHLLGRAPYDESEIAFHVDLYNEEGYEAEINSYLDSPEYLES 142

Query: 418 FGDNVVPSTVFRGTYRS--SEEFNRLCKSNAGPAASDKAK 531
           FG+NVVP      T R   +  FNR+ +   G A SD+A+
Sbjct: 143 FGENVVPYYRGFATQRGQWTVGFNRMFQLYRGYANSDRAQ 182

[60][TOP]
>UniRef100_B2BN92 CpcI n=1 Tax=Arthrospira platensis Sp-14 RepID=B2BN92_SPIPL
          Length = 288

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 63/162 (38%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  +    + A  RQ+ GN YL   E    A   S     ++T++ELVR +AK+  Y
Sbjct: 25  PNWSRENAQEVIRAVYRQLVGNDYLMSSERLTSA--ESLLCDGSITVRELVRCVAKSVLY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + +F  PN   R++E+NYKHLLGR P  ++EV  H     + GYDADID+Y  + EY   
Sbjct: 83  KKKFFYPNFQTRVIEVNYKHLLGRAPYDESEVVFHLDLYQNEGYDADIDSYIDSPEYLES 142

Query: 418 FGDNVVPSTVFRG--TYRSSEE--FNRLCKSNAGPAASDKAK 531
           FG+N+VP   +RG  T R  +   F R+ +   G A SD A+
Sbjct: 143 FGENIVP--YYRGFETQRGQKTVGFTRMFRLYRGYANSDSAQ 182

[61][TOP]
>UniRef100_B2BN77 CpcI n=1 Tax=Arthrospira platensis Sp-7 RepID=B2BN77_SPIPL
          Length = 288

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 63/162 (38%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  +    + A  RQ+ GN YL   E    A   S     ++T++E VR +AK+  Y
Sbjct: 25  PNWSRENAQEVIRAVYRQLLGNHYLMSSERLISA--ESLLSDGSITVREFVRCVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + +F  PN   R++ELNYKHLLGR P  ++EV  H     + GYDADID+Y  + EY   
Sbjct: 83  KKKFFYPNFQTRVIELNYKHLLGRAPYDESEVVFHLDLYQNEGYDADIDSYIDSPEYLES 142

Query: 418 FGDNVVPSTVFRG--TYRSSEE--FNRLCKSNAGPAASDKAK 531
           FG+N+VP   +RG  T R  +   F R+ +   G A SD A+
Sbjct: 143 FGENIVP--YYRGFETQRGQKTVGFTRMLRLYRGYANSDSAQ 182

[62][TOP]
>UniRef100_B2BN58 CpcH n=3 Tax=Arthrospira RepID=B2BN58_SPIPL
          Length = 271

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 61/160 (38%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + AA RQV GN +L + E    A   S  R   +T+++ VR LA +  Y
Sbjct: 25  PNFTEGDVQAVIWAAYRQVMGNEHLMQRERLTSA--ESLLRQGEITVRDFVRALAVSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F   NS  R +ELNYKHLLGR P  ++E++ H       GY+A+I++Y  + EY   
Sbjct: 83  RKKFFYGNSQVRFIELNYKHLLGRAPYDESEIAFHVDLYNEEGYEAEINSYLDSPEYLES 142

Query: 418 FGDNVVPSTVFRGTYRS--SEEFNRLCKSNAGPAASDKAK 531
           FG+NVVP      T R   +  FNR+ +   G A SD+A+
Sbjct: 143 FGENVVPYYRGFATQRGQWTVGFNRMFQLYRGYANSDRAQ 182

[63][TOP]
>UniRef100_A4CSF2 Possible phycobilisome linker polypeptide n=1 Tax=Synechococcus sp.
           WH 7805 RepID=A4CSF2_SYNPV
          Length = 246

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 54/122 (44%), Positives = 75/122 (61%), Gaps = 2/122 (1%)
 Frame = +1

Query: 82  DGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMT 261
           D    + AA RQVFGNA+L +EE    A   S +   +L ++ LV   A++  YR  F+ 
Sbjct: 17  DAQAVIRAAYRQVFGNAHLMDEERCSSA--ESLYMNGDLNVQGLVTAFAQSDTYRRLFLD 74

Query: 262 PNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTY-FGAEYDSLFGDNVV 435
            N  YR VELN+KHLLGR P  QAE+S H Q L + GY+A+I++Y +  EY + FG + V
Sbjct: 75  KNGPYRFVELNFKHLLGRAPHNQAELSEHVQRLANEGYEAEINSYTYSDEYLNAFGVDDV 134

Query: 436 PS 441
           P+
Sbjct: 135 PA 136

[64][TOP]
>UniRef100_B4AX66 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 7822
           RepID=B4AX66_9CHRO
          Length = 291

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 60/162 (37%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + A  RQV GN Y+ + E   +A   S      +T++E VR +AK+  Y
Sbjct: 25  PNWTTEDAQNIIRAVYRQVLGNDYIMKSER--LASAESLLANGVITVREFVRAVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSL 417
           +S+F   N   R++ELNYKHLLGR P  ++EV  H     + G++ADID+Y    EY   
Sbjct: 83  KSKFFYNNFQTRVIELNYKHLLGRAPYDESEVIYHLDLYENKGFEADIDSYIDSVEYQEN 142

Query: 418 FGDNVVPSTVFRG----TYRSSEEFNRLCKSNAGPAASDKAK 531
           FGDN+VP   +RG    T + +  F R+ +   G A SD+++
Sbjct: 143 FGDNIVP--YYRGFNTQTGQKTVGFTRMFRLYRGYANSDRSQ 182

[65][TOP]
>UniRef100_B2BN76 CpcH n=1 Tax=Arthrospira platensis Sp-7 RepID=B2BN76_SPIPL
          Length = 271

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 61/160 (38%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + AA RQV GN +L + E    A   S  R   +T+++ VR LA +  Y
Sbjct: 25  PNFTEGDVQAVIWAAYRQVMGNEHLMQRERLTSA--ESLLRQGEITVRDFVRALAVSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F   NS  R +ELNYKHLLGR P  ++E++ H       GY+A+I++Y  + EY   
Sbjct: 83  RKKFFYANSQVRFIELNYKHLLGRAPLDESEMAFHVDLYNEEGYEAEINSYLDSPEYLES 142

Query: 418 FGDNVVPSTVFRGTYRS--SEEFNRLCKSNAGPAASDKAK 531
           FG+NVVP      T R   +  FNR+ +   G A SD+A+
Sbjct: 143 FGENVVPYYRGFATQRGHWTVGFNRIFQLYRGYANSDRAQ 182

[66][TOP]
>UniRef100_P14879 Phycobilisome 31.6 kDa linker polypeptide, phycocyanin-associated,
           rod n=1 Tax=Fremyella diplosiphon RepID=PYR4_FREDI
          Length = 285

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 59/151 (39%), Positives = 88/151 (58%), Gaps = 6/151 (3%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           +AA  RQV GN Y+ + E   +  L S     N+T++E VR LAK+  Y+S+F + N   
Sbjct: 36  IAAIYRQVLGNDYVLQSER--LKGLESLLTNGNITVQEFVRQLAKSNLYKSKFFSNNFHS 93

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPSTVF 450
           R+ ELN+KHLLGR P  ++E+  H     + GY+ADID+Y   AEY + F DN+VP   +
Sbjct: 94  RVTELNFKHLLGRAPYDESEIIYHLDLYQTKGYEADIDSYIDSAEYQTNFADNIVP--YY 151

Query: 451 RG----TYRSSEEFNRLCKSNAGPAASDKAK 531
           RG      + +  F R+ +   G A SD+++
Sbjct: 152 RGFNNQLGQKTVGFTRIFQLYRGYATSDRSQ 182

[67][TOP]
>UniRef100_P11398 Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated,
           rod n=1 Tax=Mastigocladus laminosus RepID=PYR1_MASLA
          Length = 286

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 6/154 (3%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           +  + A  R V GN Y+   E    A   S  R  NLT++E VR +AK+  Y+ +F   +
Sbjct: 33  EAVINAVYRHVLGNDYIMASERLVSA--ESLLRDGNLTVREFVRSVAKSELYKKKFFYNS 90

Query: 268 STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPS 441
              R +ELNYKHLLGR P  ++E+  H     + GYDA+ID+Y    EY + FGDN+VP 
Sbjct: 91  FQTRFIELNYKHLLGRAPYDESEIVFHLDLYQNKGYDAEIDSYIDSVEYQNNFGDNIVP- 149

Query: 442 TVFRG----TYRSSEEFNRLCKSNAGPAASDKAK 531
             +RG      + +  FNR+ +   G A SD+A+
Sbjct: 150 -YYRGFETQPGQKTVGFNRMFRLYRGYANSDRAQ 182

[68][TOP]
>UniRef100_Q4C7Q6 Phycobilisome linker polypeptide:CpcD phycobilisome linker-like n=1
           Tax=Crocosphaera watsonii WH 8501 RepID=Q4C7Q6_CROWT
          Length = 255

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 59/167 (35%), Positives = 92/167 (55%), Gaps = 4/167 (2%)
 Frame = +1

Query: 61  APRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAA 240
           +P LS  +  + +    +QV GN ++ E E    A   S+     L ++E VR +AK+  
Sbjct: 12  SPSLSLDEVAIVIRGVYKQVLGNPHIMESERQLSA--ESRLCNGELIVREFVREVAKSEF 69

Query: 241 YRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDS 414
           YR R+    + YR VE+N+KHLLGR P  QAE+S+H +  + +GY+A+ID+Y  + EY  
Sbjct: 70  YRRRYFESCAPYRFVEVNFKHLLGRAPQDQAELSSHIRLCIESGYEAEIDSYLDSDEYQQ 129

Query: 415 LFGDNVVPSTVFRGTYRSSEE--FNRLCKSNAGPAASDKAKRGLNML 549
            FGDN+VP      +   S++  +NR      G A  D A +G  ++
Sbjct: 130 KFGDNIVPYYQGAQSQVGSKQVGYNRTLSLYQGYAGVDSAFKGSRLV 176

[69][TOP]
>UniRef100_C7DQP6 CpcI n=2 Tax=Arthrospira RepID=C7DQP6_SPIPL
          Length = 288

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 63/162 (38%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  +    + A  RQ+ GN YL   E    A   S     ++T++E VR +AK+  Y
Sbjct: 25  PNWSRDNAQEVIRAVYRQLLGNDYLMSSERLTSA--ESLLCDGSITVREFVRCVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + +F  PN   R++ELNYKHLLGR P  ++EV  H     + GYDADID+Y  + EY   
Sbjct: 83  KKKFFYPNFQTRVIELNYKHLLGRAPYDESEVVFHLDLYQNEGYDADIDSYIDSPEYLES 142

Query: 418 FGDNVVPSTVFRG--TYRSSEE--FNRLCKSNAGPAASDKAK 531
           FG+N+VP   +RG  T R  +   F R+ +   G A SD A+
Sbjct: 143 FGENIVP--YYRGFETQRGQKTVGFTRMFRLYRGYANSDSAQ 182

[70][TOP]
>UniRef100_B4WGJ2 Phycobilisome Linker polypeptide domain protein n=1
           Tax=Synechococcus sp. PCC 7335 RepID=B4WGJ2_9SYNE
          Length = 247

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 3/150 (2%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           +  + A  +QV GN ++ E E    A   SQ   +++T++E VR +AK+  Y+SR+    
Sbjct: 19  ETIIRAVYKQVLGNPHVMESERLTTA--ESQLFDKSMTVREFVRAVAKSDFYKSRYFENC 76

Query: 268 STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVPS 441
             YR  ELN++H+LGR P +QAE S H +     G+DADID+Y  + EY   FG+N+VP 
Sbjct: 77  GPYRSTELNFQHILGRAPESQAETSEHIRRCAEEGFDADIDSYVDSEEYQQAFGENIVPF 136

Query: 442 TVFRGTY-RSSEEFNRLCKSNAGPAASDKA 528
              +    R    +NR    N GPA    A
Sbjct: 137 QRDKSEVGRKQVVYNRNFAVNRGPAQVSSA 166

[71][TOP]
>UniRef100_B2BN97 CpcH n=1 Tax=Arthrospira platensis Sp-16 RepID=B2BN97_SPIPL
          Length = 271

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 61/160 (38%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + AA RQV GN +L + E    A   S  R   +T+++ VR LA +  Y
Sbjct: 25  PNFTEGDVQAVIWAAYRQVMGNEHLMQRERLTSA--ESLLRQGEITVRDFVRALAVSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F   NS  R +ELNYKHLLGR P  ++E++ H       GY+A+I++Y  + EY   
Sbjct: 83  RKKFFYGNSQVRFIELNYKHLLGRAPLDESEMAFHVDLYNEEGYEAEINSYLDSPEYLES 142

Query: 418 FGDNVVPSTVFRGTYRS--SEEFNRLCKSNAGPAASDKAK 531
           FG+NVVP      T R   +  FNR+ +   G A SD+A+
Sbjct: 143 FGENVVPYYRGFATQRGQWTVGFNRIFQLYRGYANSDRAQ 182

[72][TOP]
>UniRef100_B2BN89 CpcI n=1 Tax=Arthrospira platensis Sp-12 RepID=B2BN89_SPIPL
          Length = 288

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 62/162 (38%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  +    + A  RQ+ GN YL   E    A   S     ++T++E VR +AK+  Y
Sbjct: 25  PNWSRENAQEVIRAVYRQLLGNHYLMSSERLISA--ESLLSDGSITVREFVRCVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + ++  PN   R++ELNYKHLLGR P  ++EV  H     + GYDADID+Y  + EY   
Sbjct: 83  KKKYFYPNFQTRVIELNYKHLLGRAPYDESEVVFHLDLYQNEGYDADIDSYIDSPEYLES 142

Query: 418 FGDNVVPSTVFRG--TYRSSEE--FNRLCKSNAGPAASDKAK 531
           FG+N+VP   +RG  T R  +   F R+ +   G A SD A+
Sbjct: 143 FGENIVP--YYRGFETQRGQKSVGFTRMLRLYRGYANSDSAQ 182

[73][TOP]
>UniRef100_B2BN88 CpcH n=1 Tax=Arthrospira platensis Sp-12 RepID=B2BN88_SPIPL
          Length = 271

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 61/160 (38%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + AA RQV GN +L + E    A   S  R   +T+++ VR LA +  Y
Sbjct: 25  PNFTEGDVQAVIWAAYRQVMGNEHLMQRERLTSA--ESLLRQGEITVRDFVRALAVSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F   NS  R +ELNYKHLLGR P  ++E++ H       GY+A+I++Y  + EY   
Sbjct: 83  RKKFFYGNSQVRFIELNYKHLLGRAPLDESEMAFHVDLYNEEGYEAEINSYLDSPEYLES 142

Query: 418 FGDNVVPSTVFRGTYRS--SEEFNRLCKSNAGPAASDKAK 531
           FG+NVVP      T R   +  FNR+ +   G A SD+A+
Sbjct: 143 FGENVVPYYRGFATQRGHWTVGFNRIFQLYRGYANSDRAQ 182

[74][TOP]
>UniRef100_B2BN79 CpcH n=1 Tax=Arthrospira platensis Sp-8 RepID=B2BN79_SPIPL
          Length = 271

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 61/160 (38%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + AA RQV GN +L + E    A   S  R   +T+++ VR LA +  Y
Sbjct: 25  PNFTEGDVQAVIWAAYRQVMGNEHLMQRERLTSA--ESLMRQGEITVRDFVRALAVSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F   NS  R +ELNYKHLLGR P  ++E++ H       GY+A+I++Y  + EY   
Sbjct: 83  RKKFFYGNSQVRFIELNYKHLLGRAPLDESEMAFHVDLYNEEGYEAEINSYLDSPEYLES 142

Query: 418 FGDNVVPSTVFRGTYRS--SEEFNRLCKSNAGPAASDKAK 531
           FG+NVVP      T R   +  FNR+ +   G A SD+A+
Sbjct: 143 FGENVVPYYRGFATQRGQWTVGFNRIFQLYRGYANSDRAQ 182

[75][TOP]
>UniRef100_B2BN64 CpcH n=1 Tax=Arthrospira platensis Sp-3 RepID=B2BN64_SPIPL
          Length = 271

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 61/160 (38%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + AA RQV GN +L + E    A   S  R   +T+++ VR LA +  Y
Sbjct: 25  PNFTEGDVQAVIWAAYRQVMGNEHLMQRERLTSA--ESLLRQGEITVRDFVRALAVSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F   NS  R +ELNYKHLLGR P  ++E++ H       GY+A+I++Y  + EY   
Sbjct: 83  RKKFFYGNSQVRFIELNYKHLLGRAPLDESEMAFHVDLYNEEGYEAEINSYLDSPEYLES 142

Query: 418 FGDNVVPSTVFRGTYRS--SEEFNRLCKSNAGPAASDKAK 531
           FG+NVVP      T R   +  FNR+ +   G A SD+A+
Sbjct: 143 FGENVVPYYRGFATQRGQWTVGFNRIFQLYRGYANSDRAQ 182

[76][TOP]
>UniRef100_Q4C208 Phycobilisome linker polypeptide:CpcD phycobilisome linker-like n=1
           Tax=Crocosphaera watsonii WH 8501 RepID=Q4C208_CROWT
          Length = 261

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 57/169 (33%), Positives = 92/169 (54%), Gaps = 4/169 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + A  RQV GN +L E +    A   +Q R  ++T++  VR +A+++ Y
Sbjct: 19  PNYTEDDLQQIIRAVYRQVLGNQHLMEGDRLSSA--EAQLRNGDITVRGFVRAVAQSSLY 76

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           +S F    S YR +EL++KH LGR P +Q EVS H Q     GY+A+I++Y  + EY   
Sbjct: 77  QSLFFHSASQYRFIELSFKHFLGRPPQSQEEVSEHVQIYNEGGYEAEINSYLDSDEYAQS 136

Query: 418 FGDNVV--PSTVFRGTYRSSEEFNRLCKSNAGPAASDKAKRGLNMLVTV 558
           FG+N+V  P ++      ++E FNR      GPA +D +     ++ ++
Sbjct: 137 FGENIVPYPRSIRSVVGLTNETFNRTFSLLRGPANNDSSNNNARLISSI 185

[77][TOP]
>UniRef100_C7DT11 CpcI n=3 Tax=Arthrospira RepID=C7DT11_SPIMA
          Length = 288

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 63/162 (38%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  +    + A  RQ+ GN YL   E    A   S     ++T++E VR +AK+  Y
Sbjct: 25  PNWSRENAQEVIRAVYRQLLGNDYLMSSERLISA--ESLLCDGSITVREFVRCVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + +F  PN   R++ELNYKHLLGR P  ++EV  H     + GYDADID+Y  + EY   
Sbjct: 83  KKKFFYPNFQTRVIELNYKHLLGRAPYDESEVVFHLDLYQNEGYDADIDSYIDSPEYLES 142

Query: 418 FGDNVVPSTVFRG--TYRSSEE--FNRLCKSNAGPAASDKAK 531
           FG+N+VP   +RG  T R  +   F R+ +   G A SD A+
Sbjct: 143 FGENIVP--YYRGFETQRGQKTVGFTRMFRLYRGYANSDSAQ 182

[78][TOP]
>UniRef100_B2BN98 CpcI n=2 Tax=Arthrospira platensis RepID=B2BN98_SPIPL
          Length = 288

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 63/162 (38%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  +    + A  RQ+ GN YL   E    A   S     ++T++E VR +AK+  Y
Sbjct: 25  PNWSRENAQEVIRAVYRQLLGNDYLMSSERLISA--ESLLCDGSITVREFVRCVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + +F  PN   R++ELNYKHLLGR P  ++EV  H     + GYDADID+Y  + EY   
Sbjct: 83  KKKFFYPNFQTRVIELNYKHLLGRAPYDESEVVFHLDLYQNEGYDADIDSYIDSPEYLES 142

Query: 418 FGDNVVPSTVFRG--TYRSSEE--FNRLCKSNAGPAASDKAK 531
           FG+N+VP   +RG  T R  +   F R+ +   G A SD A+
Sbjct: 143 FGENIVP--YYRGFETQRGQKTVGFTRMFRLYRGYANSDSAQ 182

[79][TOP]
>UniRef100_B2BN80 CpcI n=1 Tax=Arthrospira platensis Sp-8 RepID=B2BN80_SPIPL
          Length = 288

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 63/162 (38%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  +    + A  RQ+ GN YL   E    A   S     ++T++E VR +AK+  Y
Sbjct: 25  PNWSRENAQEVIRAVYRQLLGNDYLMSSERLISA--ESLLCDGSITVREFVRCVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + +F  PN   R++ELNYKHLLGR P  ++EV  H     + GYDADID+Y  + EY   
Sbjct: 83  KKKFFYPNFQTRVIELNYKHLLGRAPYDESEVVFHLDLYQNEGYDADIDSYIDSPEYLES 142

Query: 418 FGDNVVPSTVFRG--TYRSSEE--FNRLCKSNAGPAASDKAK 531
           FG+N+VP   +RG  T R  +   F R+ +   G A SD A+
Sbjct: 143 FGENIVP--YYRGFETQRGQKTVGFTRMFRLYRGYANSDSAQ 182

[80][TOP]
>UniRef100_A3Z925 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. RS9917
           RepID=A3Z925_9SYNE
          Length = 303

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 62/156 (39%), Positives = 86/156 (55%), Gaps = 5/156 (3%)
 Frame = +1

Query: 73  SAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSR 252
           S  D    + AA +QVFG  Y+   E  +   + S FR   L+++ELVR LAK+  YR +
Sbjct: 47  SCGDKGAVLKAAYQQVFGGQYVMNSERLEG--VESLFRNGYLSVRELVRSLAKSGLYREK 104

Query: 253 FMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGD 426
           F    + Y  +ELN+KHLLGR P  +AE+  H + L S G DA+ID Y   AEY   FG+
Sbjct: 105 FFNNCNPYHFIELNHKHLLGRAPQNKAEMLRHFEILQSEGVDAEIDAYIDSAEYQERFGE 164

Query: 427 NVVPSTVFRGTYRSSEE---FNRLCKSNAGPAASDK 525
            +VP  +    Y + +E   F+ L +   G AAS K
Sbjct: 165 EMVP-YLHGWNYSAGQEGRQFSWLMQLARGAAASVK 199

[81][TOP]
>UniRef100_P50034 Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated,
           rod n=1 Tax=Thermosynechococcus elongatus BP-1
           RepID=PYR1_THEEB
          Length = 287

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 61/156 (39%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
 Frame = +1

Query: 82  DGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMT 261
           D +  + A  RQV GN Y+   E    A   S  R   +T++E VR +AK+  Y+ +F+ 
Sbjct: 31  DLETVIRAVYRQVLGNDYVMASERLVSA--ESLLRNGKITVREFVRAVAKSELYKEKFLY 88

Query: 262 PNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVV 435
            N   R++ELNYKHLLGR P  ++EV  H     + G+DADID+Y  + EY + FGD VV
Sbjct: 89  GNFQTRVIELNYKHLLGRAPYDESEVIFHLDLYENEGFDADIDSYIDSPEYTNSFGDWVV 148

Query: 436 PSTVFRG----TYRSSEEFNRLCKSNAGPAASDKAK 531
           P   +RG      + +  FNR+ +   G A SD+A+
Sbjct: 149 P--YYRGFNTQPGQKTVGFNRIFRLYRGYANSDRAQ 182

[82][TOP]
>UniRef100_B7K6L7 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 8801
           RepID=B7K6L7_CYAP8
          Length = 291

 Score = 94.7 bits (234), Expect = 4e-18
 Identities = 53/127 (41%), Positives = 76/127 (59%), Gaps = 2/127 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  + +  + A  RQV GNAY+ E E A +    SQF+   L+++E VR LAK+  Y
Sbjct: 24  PGRSDEEVETVIRAVYRQVLGNAYVMESERASIP--ESQFKRGELSVREFVRSLAKSDLY 81

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGPT-QAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           RSRF      YR +ELN+KH LGR P    E+ AH+  L + G++A+ID+Y  + EY + 
Sbjct: 82  RSRFFESCPRYRFIELNFKHFLGRTPDGLEEMRAHSTILDTQGFEAEIDSYLDSDEYQNA 141

Query: 418 FGDNVVP 438
           +G+  VP
Sbjct: 142 YGEYFVP 148

[83][TOP]
>UniRef100_Q3AWD0 Possible phycobilisome linker polypeptide n=1 Tax=Synechococcus sp.
           CC9902 RepID=Q3AWD0_SYNS9
          Length = 244

 Score = 94.4 bits (233), Expect = 5e-18
 Identities = 59/158 (37%), Positives = 86/158 (54%), Gaps = 4/158 (2%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           D  + +  +QVFGN +L E +      L + F   +LT++  V  LA++  YR  F+ PN
Sbjct: 19  DEVIQSIYKQVFGNRHLMELDVNKS--LEALFMNGDLTVQGFVTALAQSETYRKLFLEPN 76

Query: 268 STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTY-FGAEYDSLFGDNVVPS 441
           S YR VELN+KH+LGR P  QAE+ AH + +   GY+A+I +Y +  EY  +FG + VP 
Sbjct: 77  SPYRFVELNFKHMLGRAPHDQAELMAHVRLMNDQGYEAEIASYTYSDEYLQVFGVDQVPH 136

Query: 442 TVFRGTYRSSEEFN--RLCKSNAGPAASDKAKRGLNML 549
                T   +   N  R    +AG A  D A +G  +L
Sbjct: 137 NRSTQTVSGARTINFPRAAAVDAGYAGFDGATKGSKLL 174

[84][TOP]
>UniRef100_Q4BX62 Phycobilisome linker polypeptide:CpcD phycobilisome linker-like n=1
           Tax=Crocosphaera watsonii WH 8501 RepID=Q4BX62_CROWT
          Length = 264

 Score = 94.4 bits (233), Expect = 5e-18
 Identities = 55/152 (36%), Positives = 86/152 (56%), Gaps = 4/152 (2%)
 Frame = +1

Query: 82  DGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMT 261
           D    + A  +QV GN +L EE+  + A   +  RG ++T+++ VR +AK+  Y+S F  
Sbjct: 30  DLQTIIRAVYKQVLGNEHLMEEQRLESA--EALLRGGDITVRQFVRLVAKSELYKSLFFY 87

Query: 262 PNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVV 435
               YR +ELN+KHLLGR P +QAE++ H +     GYDA+ID+Y  + EY   FG+++V
Sbjct: 88  ACPPYRFIELNFKHLLGRAPQSQAEITEHVEIYYEQGYDAEIDSYLDSDEYTLSFGEDIV 147

Query: 436 PST--VFRGTYRSSEEFNRLCKSNAGPAASDK 525
           P    +      ++  FN +     G A SD+
Sbjct: 148 PYARHIRSQVGLNNNSFNGMFSLLRGSATSDR 179

[85][TOP]
>UniRef100_Q05Z87 Possible phycobilisome linker polypeptide n=1 Tax=Synechococcus sp.
           BL107 RepID=Q05Z87_9SYNE
          Length = 244

 Score = 94.4 bits (233), Expect = 5e-18
 Identities = 60/158 (37%), Positives = 85/158 (53%), Gaps = 4/158 (2%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           D  + +  +QVFGN +L E +      L + F   +LT++  V  LA++  YR  F+ P+
Sbjct: 19  DEVIQSIYKQVFGNRHLMELDVNQS--LEALFMNGDLTVQGFVTALAQSETYRKLFLEPS 76

Query: 268 STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTY-FGAEYDSLFGDNVVPS 441
           S YR VELN+KHLLGR P  QAE+ AH + +   GYDA+I +Y +  EY  +FG + VP 
Sbjct: 77  SPYRFVELNFKHLLGRAPHDQAELMAHVRLMNEHGYDAEIASYTYSDEYLQVFGVDQVPH 136

Query: 442 TVFRGTYRSSEEFN--RLCKSNAGPAASDKAKRGLNML 549
                T       N  R    +AG A  D A +G  +L
Sbjct: 137 NRSTQTVSGGRTINYPRAAAVDAGYAGFDGAAKGSRLL 174

[86][TOP]
>UniRef100_C7QTB5 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 8802
           RepID=C7QTB5_CYAP0
          Length = 273

 Score = 94.4 bits (233), Expect = 5e-18
 Identities = 57/154 (37%), Positives = 89/154 (57%), Gaps = 4/154 (2%)
 Frame = +1

Query: 82  DGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMT 261
           + ++A+ AA RQV GN +L   E    A   S  R  ++++K+ VR +A +  YR++F  
Sbjct: 31  EANLAIRAAYRQVLGNEHLMSRERLTSA--ESLLRNGSISVKDFVRAIALSELYRNKFFH 88

Query: 262 PNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVV 435
            N   R +ELNYKHLLGR P  Q+E++ HT      GY+++I++Y  + EY   FGD +V
Sbjct: 89  SNPQNRFIELNYKHLLGRVPYDQSEIAYHTDLYNQEGYESEINSYIDSPEYQEHFGDLIV 148

Query: 436 PSTVFRGTYRSSEE--FNRLCKSNAGPAASDKAK 531
           P      T R+ +   F+R+ +   G A SD+A+
Sbjct: 149 PFYRGFATERNQKTVGFSRIFQVYRGYATSDRAQ 182

[87][TOP]
>UniRef100_B2BN94 CpcH n=1 Tax=Arthrospira platensis Sp-15 RepID=B2BN94_SPIPL
          Length = 271

 Score = 94.4 bits (233), Expect = 5e-18
 Identities = 60/160 (37%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + AA RQV GN +L + E    A   S  R   +T+++ VR LA +  Y
Sbjct: 25  PNFTEGDVQAVIWAAYRQVMGNEHLMQRERLTSA--ESLLRQGEITVRDFVRALAVSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F   NS  R ++LNYKHLLGR P  ++E++ H       GY+A+I++Y  + EY   
Sbjct: 83  RKKFFYGNSQVRFIDLNYKHLLGRAPLDESEMAFHVDLYNEEGYEAEINSYLDSPEYLES 142

Query: 418 FGDNVVPSTVFRGTYRS--SEEFNRLCKSNAGPAASDKAK 531
           FG+NVVP      T R   +  FNR+ +   G A SD+A+
Sbjct: 143 FGENVVPYYRGFATQRGDWTVGFNRIFQLYRGYANSDRAQ 182

[88][TOP]
>UniRef100_P31329 Phycobilisome 34.5 kDa linker polypeptide,
           phycoerythrocyanin-associated, rod n=1 Tax=Nostoc sp.
           PCC 7120 RepID=PYR2_ANASP
          Length = 278

 Score = 94.4 bits (233), Expect = 5e-18
 Identities = 56/151 (37%), Positives = 85/151 (56%), Gaps = 6/151 (3%)
 Frame = +1

Query: 103 AAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRL 282
           AA  Q+FG   ++  +    A   +  R   +++++ V  LAK+  Y+  F   NS  RL
Sbjct: 36  AAYEQIFGRQGIYASQKFTSA--EALLRNGKISVRQFVEILAKSEFYKECFFYKNSQVRL 93

Query: 283 VELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTY-FGAEYDSLFGDNVVPSTVFRG 456
           +ELNYKHLLGR P  Q+E++ H     + GYDADID Y + +EY++ FG+++VP   +RG
Sbjct: 94  IELNYKHLLGRAPYDQSEIADHVDIYAARGYDADIDAYIYSSEYENAFGNSIVP--YYRG 151

Query: 457 TY----RSSEEFNRLCKSNAGPAASDKAKRG 537
                   +  FNR+C+   G   SD A+ G
Sbjct: 152 FQSIPGMKTVGFNRICELYRGRGNSDNAQMG 182

[89][TOP]
>UniRef100_Q3M8Z8 CpcD phycobilisome linker-like n=1 Tax=Anabaena variabilis ATCC
           29413 RepID=Q3M8Z8_ANAVT
          Length = 278

 Score = 94.0 bits (232), Expect = 7e-18
 Identities = 56/151 (37%), Positives = 84/151 (55%), Gaps = 6/151 (3%)
 Frame = +1

Query: 103 AAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRL 282
           AA  Q+FG   ++  +    A   +  R   +++++ V  LAK+  Y+  F   NS  RL
Sbjct: 36  AAYEQIFGRQGIYASQKFTSA--EALLRNGKISVRQFVEVLAKSEFYKECFFYKNSQVRL 93

Query: 283 VELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTY-FGAEYDSLFGDNVVPSTVFRG 456
           +ELNYKHLLGR P  Q+E++ H     + GYDADID Y +  EY++ FG+++VP   +RG
Sbjct: 94  IELNYKHLLGRAPYDQSEIADHVDIYAARGYDADIDAYIYSPEYENAFGNSIVP--YYRG 151

Query: 457 TY----RSSEEFNRLCKSNAGPAASDKAKRG 537
                   +  FNR+C+   G   SD A+ G
Sbjct: 152 FQSIPGMKTVGFNRICELYRGRGNSDNAQMG 182

[90][TOP]
>UniRef100_B2BN67 CpcH n=1 Tax=Arthrospira platensis Sp-4 RepID=B2BN67_SPIPL
          Length = 271

 Score = 94.0 bits (232), Expect = 7e-18
 Identities = 60/160 (37%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + AA RQV GN +L + E    A   S  R   +T+++ VR LA +  Y
Sbjct: 25  PNFTEGDVQAVIWAAYRQVMGNEHLMQRERLTSA--ESLMRQGEITVRDFVRALAVSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F   NS  R +ELNYKHLLGR P  ++E++ H       G++A+I++Y  + EY   
Sbjct: 83  RKKFFYGNSQVRFIELNYKHLLGRAPLDESEMAFHVDLYNEEGFEAEINSYLDSPEYLES 142

Query: 418 FGDNVVPSTVFRGTYRS--SEEFNRLCKSNAGPAASDKAK 531
           FG+NVVP      T R   +  FNR+ +   G A SD+A+
Sbjct: 143 FGENVVPYYRGFATQRGQWTVGFNRIFQLYRGYANSDRAQ 182

[91][TOP]
>UniRef100_B2X2E4 Rod linker polypeptide CpcI n=1 Tax=Arthrospira platensis Sp-S
           RepID=B2X2E4_SPIPL
          Length = 288

 Score = 93.6 bits (231), Expect = 9e-18
 Identities = 64/160 (40%), Positives = 88/160 (55%), Gaps = 9/160 (5%)
 Frame = +1

Query: 79  WDGDVA---VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRS 249
           W  D A   + A  RQ+ GN YL   E    A   S     ++T++E VR +AK+  Y+ 
Sbjct: 27  WGRDNAQEVIRAVYRQLLGNDYLMSSERLTSA--ESLLCDGSITVREFVRCVAKSELYKK 84

Query: 250 RFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFG 423
           +F  PN   R++ELNYKHLLGR P  ++EV  H     + GYDADID+Y  + EY   FG
Sbjct: 85  KFFYPNFQTRVIELNYKHLLGRAPYDESEVVFHLDLYQNEGYDADIDSYIDSPEYLESFG 144

Query: 424 DNVVPSTVFRG--TYRSSEE--FNRLCKSNAGPAASDKAK 531
           +N+VP   +RG  T R  +   F R+ +   G A SD A+
Sbjct: 145 ENIVP--YYRGFETQRGQKTVGFIRMFRLYRGYANSDSAQ 182

[92][TOP]
>UniRef100_B2BN68 CpcI n=1 Tax=Arthrospira platensis Sp-4 RepID=B2BN68_SPIPL
          Length = 288

 Score = 93.6 bits (231), Expect = 9e-18
 Identities = 62/162 (38%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  +    + A  RQ+ GN YL   E    A   S     +++++E VR +AK+  Y
Sbjct: 25  PNWSRENAQEVIRAVYRQLLGNDYLMSSERLISA--ESLLCDGSISVREFVRCVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + +F  PN   R++ELNYKHLLGR P  ++EV  H     + GYDADID+Y  + EY   
Sbjct: 83  KKKFFYPNFQTRVIELNYKHLLGRAPYDESEVVFHLDLYQNEGYDADIDSYIDSPEYLES 142

Query: 418 FGDNVVPSTVFRG--TYRSSEE--FNRLCKSNAGPAASDKAK 531
           FG+N+VP   +RG  T R  +   F R+ +   G A SD A+
Sbjct: 143 FGENIVP--YYRGFETQRGQKTVGFTRMFRLYRGYANSDSAQ 182

[93][TOP]
>UniRef100_Q10XB2 Phycobilisome linker polypeptide n=1 Tax=Trichodesmium erythraeum
           IMS101 RepID=Q10XB2_TRIEI
          Length = 289

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 57/159 (35%), Positives = 88/159 (55%), Gaps = 6/159 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S+ + +  + A  +QV GNAY+ E E   + V  S+ +   +T++E VR + ++  Y
Sbjct: 24  PGRSSEEIETVIRAVYKQVLGNAYVMESER--LTVPESKLKEGTITVREFVRQVGRSDLY 81

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGPT-QAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           RSRF  P   YR VELN+KH LGR P    E+  H+  L    ++ADID+Y  + EY S 
Sbjct: 82  RSRFFDPCPRYRSVELNFKHFLGRAPDGYDEMKLHSNLLDEGSFEADIDSYIDSDEYSSA 141

Query: 418 FGDNVVPSTVFRG----TYRSSEEFNRLCKSNAGPAASD 522
           +G+N+VP   +RG    T +    F  + +   G ++SD
Sbjct: 142 YGENIVP--YYRGYKTQTGKKMVGFTHIFQLLRGASSSD 178

[94][TOP]
>UniRef100_Q9S432 Rod linker polypeptide CpcH n=1 Tax=Arthrospira platensis
           RepID=Q9S432_SPIPL
          Length = 271

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 60/160 (37%), Positives = 86/160 (53%), Gaps = 4/160 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + AA RQV GN +L + E    A   S  R   +T+++ VR LA +  Y
Sbjct: 25  PNFTEGDVQAVIWAAYRQVMGNEHLMQREGLTSA--ESLLRQGEITVRDFVRALAVSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F   NS  R +ELNYKHLLGR    ++E++ H       GY+A+I++Y  + EY   
Sbjct: 83  RKKFFYGNSQVRFIELNYKHLLGRARYDESEIAFHVDLYNEEGYEAEINSYLDSPEYLES 142

Query: 418 FGDNVVPSTVFRGTYRS--SEEFNRLCKSNAGPAASDKAK 531
           FG+NVVP      T R   +  FNR+ +   G A SD+A+
Sbjct: 143 FGENVVPYYRGFATQRGQWTVGFNRMFQLYRGYANSDRAQ 182

[95][TOP]
>UniRef100_Q8VV06 Phycocyanin associated linker protein n=1 Tax=Synechocystis sp. PCC
           6714 RepID=Q8VV06_SYNY4
          Length = 291

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 57/159 (35%), Positives = 86/159 (54%), Gaps = 3/159 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  D  + + A  RQV GN Y+ + E    A   S     +++++E VR +AK+  Y
Sbjct: 25  PDFSLDDAKMVIRAVYRQVLGNDYIMDSERLKGA--ESLLTNGSISVREFVRTVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSL 417
           + +F+  N   R++ELNYKHLLGR P ++ EV  H     + G+DADID+Y    EY   
Sbjct: 83  KKKFLYNNFQTRVIELNYKHLLGRAPFSEDEVIFHLDLYENRGFDADIDSYIDSVEYQEN 142

Query: 418 FGDNVVPSTVFRGTYRS-SEEFNRLCKSNAGPAASDKAK 531
           FG+N+VP   F       +  F R+ +   G A SD+++
Sbjct: 143 FGENIVPYYRFNNQVGDRTVGFTRMFRLYRGYANSDRSQ 181

[96][TOP]
>UniRef100_Q4C7Q5 Phycobilisome linker polypeptide:CpcD phycobilisome linker-like n=1
           Tax=Crocosphaera watsonii WH 8501 RepID=Q4C7Q5_CROWT
          Length = 291

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 51/127 (40%), Positives = 76/127 (59%), Gaps = 2/127 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  + +  + A  RQ+ GNAY+ E E A +    SQF+   L+++E VR LAK+  Y
Sbjct: 24  PGRSEEEVETVIRAVYRQILGNAYVMESERASIP--ESQFKRGELSVREFVRALAKSDLY 81

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGPT-QAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R+RF      YR +ELN+KH LGR P    E+ AH+  L + G++A+ID+Y  + EY + 
Sbjct: 82  RTRFFETCPRYRFIELNFKHFLGRTPDGLEEMRAHSTILDTQGFEAEIDSYLDSDEYQNA 141

Query: 418 FGDNVVP 438
           +G+  VP
Sbjct: 142 YGEFFVP 148

[97][TOP]
>UniRef100_D0CHX2 Phycobilisome linker polypeptide, C-phycoerythrin class
           II-associated n=1 Tax=Synechococcus sp. WH 8109
           RepID=D0CHX2_9SYNE
          Length = 264

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 5/143 (3%)
 Frame = +1

Query: 25  PATYSSVDATIDAPRLSAWDGDV---AVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRN 195
           P  +S     +   RL+  D +     + AA RQV GNA++ + E     VL +QF    
Sbjct: 7   PRDHSECPHRVTTDRLAPSDREALHQGIEAAYRQVLGNAHVMDYERC--GVLEAQFTDGR 64

Query: 196 LTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGPTQAEVSAHTQTLMSA-GY 372
           L  +E VRGLAK+ AY+SR+    S YR +ELN+KHLLGR P   +  A+   + SA G+
Sbjct: 65  LCTREFVRGLAKSEAYKSRYFFKVSAYRGIELNFKHLLGRPPLNQQEIANAALIQSAQGF 124

Query: 373 DADIDTYF-GAEYDSLFGDNVVP 438
           +A IDT    AEY  +FGD+ +P
Sbjct: 125 EALIDTIIDSAEYAEVFGDHGIP 147

[98][TOP]
>UniRef100_B2BNA0 CpcH n=1 Tax=Arthrospira platensis Sp-17 RepID=B2BNA0_SPIPL
          Length = 271

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 60/160 (37%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + AA RQV GN +L + E    A   S  R   +T+++ VR LA +  Y
Sbjct: 25  PNFTEGDVQAVIWAAYRQVMGNEHLKQRERLTSA--ESLLRQGEITVRDFVRALAVSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F   NS  R ++LNYKHLLGR P  ++E++ H       GY+A+I++Y  + EY   
Sbjct: 83  RKKFFYGNSQVRFIDLNYKHLLGRAPLDESEMAFHVDLYNEEGYEAEINSYLDSPEYLES 142

Query: 418 FGDNVVPSTVFRGTYRS--SEEFNRLCKSNAGPAASDKAK 531
           FG+NVVP      T R   +  FNR+ +   G A SD+A+
Sbjct: 143 FGENVVPYYRGFATQRGHWTVGFNRIFQLYRGYANSDRAQ 182

[99][TOP]
>UniRef100_P73203 Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated,
           rod 1 n=1 Tax=Synechocystis sp. PCC 6803
           RepID=PYR1_SYNY3
          Length = 291

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 57/159 (35%), Positives = 86/159 (54%), Gaps = 3/159 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  D  + + A  RQV GN Y+ + E    A   S     +++++E VR +AK+  Y
Sbjct: 25  PDFSLDDAKMVIRAVYRQVLGNDYIMDSERLKGA--ESLLTNGSISVREFVRTVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSL 417
           + +F+  N   R++ELNYKHLLGR P ++ EV  H     + G+DADID+Y    EY   
Sbjct: 83  KKKFLYNNFQTRVIELNYKHLLGRAPFSEDEVIFHLDLYENQGFDADIDSYIDSVEYQEN 142

Query: 418 FGDNVVPSTVFRGTYRS-SEEFNRLCKSNAGPAASDKAK 531
           FG+N+VP   F       +  F R+ +   G A SD+++
Sbjct: 143 FGENIVPYYRFNNQVGDRTVGFTRMFRLYRGYANSDRSQ 181

[100][TOP]
>UniRef100_Q7U4R5 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. WH 8102
           RepID=Q7U4R5_SYNPX
          Length = 294

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 50/116 (43%), Positives = 75/116 (64%), Gaps = 2/116 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + A  +QV GNAY+ + E   VA   SQF+   +++++LVR +AK+  YRSRF    + Y
Sbjct: 37  IRAVYKQVLGNAYVMDSERQVVA--ESQFKLGEISVRDLVRRIAKSDLYRSRFFESCARY 94

Query: 277 RLVELNYKHLLGRGPTQ-AEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
           R +EL ++HLLGR P    E+  H++ L S+GYDADID++  + EY + FG+  VP
Sbjct: 95  RYIELAFRHLLGRAPADFEEMRGHSERLDSSGYDADIDSFVDSDEYQNAFGEWTVP 150

[101][TOP]
>UniRef100_A5GVN4 Phycobilisome linker polypeptide, C-phycoerythrin class
           I-associated n=1 Tax=Synechococcus sp. RCC307
           RepID=A5GVN4_SYNR3
          Length = 244

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 59/150 (39%), Positives = 84/150 (56%), Gaps = 4/150 (2%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           ++   RQVFGN +L E +      L + F   +LT++ LV  LA++  YR  F+ PNS Y
Sbjct: 22  ISQVYRQVFGNRHLMELDVQPS--LEALFMNGDLTVQGLVTTLAQSETYRKYFLEPNSAY 79

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTY-FGAEYDSLFGDNVVPSTVF 450
           R VELN+KHLLGR P  QAEV  H   L   GY+A+I +Y +  EY + FG + VP    
Sbjct: 80  RFVELNFKHLLGRAPRNQAEVMEHVSRLADEGYEAEIASYTYSEEYLAAFGIDQVPYPRA 139

Query: 451 RGTY--RSSEEFNRLCKSNAGPAASDKAKR 534
             T    +S +++R    + G A  D +K+
Sbjct: 140 LATTPGGASIDYSRAKAMDVGTAGFDGSKK 169

[102][TOP]
>UniRef100_Q8VV07 Phycocyanin associated linker protein n=1 Tax=Synechocystis sp. PCC
           6714 RepID=Q8VV07_SYNY4
          Length = 273

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 59/156 (37%), Positives = 87/156 (55%), Gaps = 6/156 (3%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           D  + A  RQV GN +L  +E    A   S  R R +++++ VR +A +  YR +F   N
Sbjct: 33  DAVILAVYRQVLGNDHLMSQERLTSA--ESLLRAREISVRDFVRAVALSEVYRRKFFHSN 90

Query: 268 STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVPS 441
              R +ELNYKHLLGR P  Q+E++ H+      GY+ +I++Y  + EY   FGD VVP 
Sbjct: 91  PQTRFIELNYKHLLGRAPYDQSEIAFHSDLYHQRGYETEINSYIDSLEYTESFGDWVVP- 149

Query: 442 TVFRG--TYRSSEE--FNRLCKSNAGPAASDKAKRG 537
             FRG  T R+ +   F+R  +   G A SD+++ G
Sbjct: 150 -YFRGFATQRNQKTVGFSRSFQVYRGYATSDRSQGG 184

[103][TOP]
>UniRef100_B2BNA6 CpcH n=1 Tax=Arthrospira platensis Sp-11 RepID=B2BNA6_SPIPL
          Length = 271

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 58/160 (36%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + AA RQV GN +L + E+   A   S  R   +T+++ VR L  +  Y
Sbjct: 25  PNFTEGDVQAVIWAAYRQVMGNEHLMQRESLTSA--ESLLRQGEITVRDFVRALPVSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F   +S  R +ELNYKHLLGR P  +++++ H       GY+A+I++Y  + EY   
Sbjct: 83  RKKFFYGHSQVRFIELNYKHLLGRAPYDESQIAFHVDLYNEEGYEAEINSYLDSPEYLES 142

Query: 418 FGDNVVPSTVFRGTYRS--SEEFNRLCKSNAGPAASDKAK 531
           FG+NVVP      T R   +  FNR+ +   G A SD+A+
Sbjct: 143 FGENVVPYYRGFATQRGQWTVAFNRMFQLYRGYANSDRAQ 182

[104][TOP]
>UniRef100_P11399 Phycobilisome 34.5 kDa linker polypeptide,
           phycoerythrocyanin-associated, rod n=1 Tax=Mastigocladus
           laminosus RepID=PYR2_MASLA
          Length = 279

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 64/179 (35%), Positives = 93/179 (51%), Gaps = 7/179 (3%)
 Frame = +1

Query: 22  RPATYSSVDATIDA-PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNL 198
           R A    VD  I+  P  S  +  +    A  QVFG   L+  +    A   +  R   +
Sbjct: 8   RLAIKDEVDKKIELRPNWSEDELQIVFKTAYEQVFGRQGLYASQR--FATAEALLRNGKI 65

Query: 199 TMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYD 375
           ++K+ +  LAK+  Y+  F   NS  R +ELNYKHLLGR P  Q+E++ H     +AGYD
Sbjct: 66  SVKQFIELLAKSEFYKECFFYNNSQVRFIELNYKHLLGRAPYDQSEIAFHVDLYAAAGYD 125

Query: 376 ADIDTY-FGAEYDSLFGDNVVPSTVFRGTY----RSSEEFNRLCKSNAGPAASDKAKRG 537
           A+I++Y +  EYD+ FG+ VVP   +RG        +  FNR+ +   G A SD A+ G
Sbjct: 126 AEIESYIYSPEYDNAFGNFVVP--YYRGFQSIPGMKTVGFNRIFELYRGRANSDNAQFG 182

[105][TOP]
>UniRef100_Q05237 Phycobilisome 32.3 kDa linker polypeptide, phycocyanin-associated,
           rod n=1 Tax=Synechococcus sp. PCC 7002 RepID=PYR1_SYNP2
          Length = 290

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 57/155 (36%), Positives = 86/155 (55%), Gaps = 5/155 (3%)
 Frame = +1

Query: 82  DGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMT 261
           D    + A  RQV GN Y+   E    A   S F    +++++ VR +A++  Y+ +F+ 
Sbjct: 30  DAQTVIRAVYRQVLGNDYVMSSERLTAA--ESLFTNGFISVRDFVRAVAQSELYKEKFLY 87

Query: 262 PNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVV 435
            N   R++ELN+KHLLGR P  +AEV  H     + G++ADI++Y   AEY   FGDN+V
Sbjct: 88  NNFQTRVIELNFKHLLGRAPYDEAEVIEHLDRYQNEGFEADINSYIDSAEYTENFGDNIV 147

Query: 436 P---STVFRGTYRSSEEFNRLCKSNAGPAASDKAK 531
           P   S V +  +R +  F R+     G A SD+A+
Sbjct: 148 PYIRSYVVQTGHR-TVGFTRMFSLQRGYANSDRAQ 181

[106][TOP]
>UniRef100_Q3AMG4 Possible phycobilisome linker polypeptide n=1 Tax=Synechococcus sp.
           CC9605 RepID=Q3AMG4_SYNSC
          Length = 244

 Score = 91.7 bits (226), Expect = 3e-17
 Identities = 72/182 (39%), Positives = 97/182 (53%), Gaps = 7/182 (3%)
 Frame = +1

Query: 25  PATYSSVDATIDAPRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTM 204
           P T SS  A +D    S    DV V  A RQVFGN +L E +      + + F   +LT+
Sbjct: 4   PTTLSSA-ANVDTSHAS----DV-VRQAYRQVFGNRHLMELDLNPS--IEALFMNGDLTV 55

Query: 205 KELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDAD 381
           + LV  LA++  Y+  F+  NS YR VELN+KHLLGR P  QAE+ +H + L   GY+A+
Sbjct: 56  QGLVTALAQSETYKKLFLESNSPYRFVELNFKHLLGRPPRDQAELMSHVRLLQEEGYEAE 115

Query: 382 IDTY-FGAEYDSLFGDNVVP-----STVFRGTYRSSEEFNRLCKSNAGPAASDKAKRGLN 543
           I +Y +  EY S FG + VP      TV  G   S+  F R    +AG A  D A+    
Sbjct: 116 IASYTYSDEYLSAFGIDQVPYNRATQTVVGG---STLYFTRAKALDAGYAGYDNAETDSK 172

Query: 544 ML 549
           +L
Sbjct: 173 LL 174

[107][TOP]
>UniRef100_C7QTB4 Phycobilisome linker polypeptide n=2 Tax=Cyanothece
           RepID=C7QTB4_CYAP0
          Length = 292

 Score = 91.7 bits (226), Expect = 3e-17
 Identities = 57/156 (36%), Positives = 86/156 (55%), Gaps = 6/156 (3%)
 Frame = +1

Query: 82  DGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMT 261
           D    + A  RQV GN Y+ + E    A   S     +++++E VR +AK+  Y+++F  
Sbjct: 31  DAQGVIRAVYRQVLGNDYIMKSERLTSA--ESLLCNGSISVREFVRAVAKSELYKTKFFY 88

Query: 262 PNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVV 435
            N   R++ELNYKHLLGR P  ++EV  H     + GYDADID+Y    EY   FG+N+V
Sbjct: 89  GNFQTRVIELNYKHLLGRAPYDESEVIYHLDLYENQGYDADIDSYIDSVEYQENFGENIV 148

Query: 436 PSTVFRG----TYRSSEEFNRLCKSNAGPAASDKAK 531
           P   +RG      + +  F R+ +   G A SD+++
Sbjct: 149 P--YYRGFSTQPGQKTVGFTRMFRLYRGYANSDRSQ 182

[108][TOP]
>UniRef100_P14880 Phycobilisome 30.8 kDa linker polypeptide, phycocyanin-associated,
           rod n=1 Tax=Fremyella diplosiphon RepID=PYR6_FREDI
          Length = 271

 Score = 91.7 bits (226), Expect = 3e-17
 Identities = 55/149 (36%), Positives = 85/149 (57%), Gaps = 6/149 (4%)
 Frame = +1

Query: 103 AAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRL 282
           +A RQV GN +LFE E    A   S  +   +++++ VR +A++  YR +F   NS  R 
Sbjct: 38  SAYRQVLGNEHLFESERLSSA--ESLLQQAQISVRDFVRAIAQSELYRQKFFYSNSQVRF 95

Query: 283 VELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPSTVFRG 456
           +ELNYKHLLGR P  ++E++ H     S GY+A+I++Y    EY   FGD++VP   +RG
Sbjct: 96  IELNYKHLLGRAPYDESEIAYHVDIYTSQGYEAEINSYIDSVEYQQNFGDSIVP--YYRG 153

Query: 457 ----TYRSSEEFNRLCKSNAGPAASDKAK 531
                 + +  F R  +   G A +D+A+
Sbjct: 154 YQTTVGQKTAGFPRFFQLYRGYANTDRAQ 182

[109][TOP]
>UniRef100_Q05WW7 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. RS9916
           RepID=Q05WW7_9SYNE
          Length = 312

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 59/155 (38%), Positives = 88/155 (56%), Gaps = 4/155 (2%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + AA RQV GNA++ + E  D   L ++F    L  +EL+RGLAK+  Y++R+    S Y
Sbjct: 82  INAAYRQVLGNAHVMDHERLDS--LEAEFTDGRLCTRELIRGLAKSELYKARYFFKVSAY 139

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP--ST 444
           R +ELN+KHLLGR P  Q E+++      S G+DA ID+    AEY  +FGD+ VP   +
Sbjct: 140 RGIELNFKHLLGRPPLDQQEIASAASIQSSKGFDALIDSIIDSAEYAEVFGDHGVPYVRS 199

Query: 445 VFRGTYRSSEEFNRLCKSNAGPAASDKAKRGLNML 549
               +  S   F R+       A+SD++K   ++L
Sbjct: 200 FTSASGMSMLNFVRIAALEQNFASSDRSKGNDSLL 234

[110][TOP]
>UniRef100_A5GJ14 Phycobilisome linker polypeptide, C-phycoerythrin class
           I-associated n=1 Tax=Synechococcus sp. WH 7803
           RepID=A5GJ14_SYNPW
          Length = 294

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 50/116 (43%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + A  +QV GNAY+ E E   VA   SQF+   ++++ELVR +AK+  YR RF    S Y
Sbjct: 37  IRAVYKQVLGNAYVMESERQLVA--ESQFKLGEISVRELVRRIAKSELYRGRFFDACSRY 94

Query: 277 RLVELNYKHLLGRGPTQ-AEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP 438
           R +EL ++HLLGR P    E+ AH + L + GYDADID++   ++Y   +G+  VP
Sbjct: 95  RYIELAFRHLLGRAPVDFDEMRAHAERLDNHGYDADIDSFLDSSDYQDTYGEWTVP 150

[111][TOP]
>UniRef100_B4VWT3 Phycobilisome Linker polypeptide domain protein n=1 Tax=Microcoleus
           chthonoplastes PCC 7420 RepID=B4VWT3_9CYAN
          Length = 289

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 58/155 (37%), Positives = 83/155 (53%), Gaps = 4/155 (2%)
 Frame = +1

Query: 79  WDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFM 258
           +D    + A  RQ+ GN Y+   E    A   S  R   + ++E VR +AK+  Y+++F 
Sbjct: 30  YDIQAVIRAVYRQLLGNDYVMASERLTSA--ESLLRNGYINVREFVRCVAKSELYKTKFF 87

Query: 259 TPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNV 432
             N   R++ELNYKHLLGR P  ++EV  H     + GYDADID+Y  + EY   FGD +
Sbjct: 88  YGNFQTRVIELNYKHLLGRAPYDESEVIYHLDLYETQGYDADIDSYIDSEEYQENFGDYI 147

Query: 433 VPSTVFRGTYRSSEE--FNRLCKSNAGPAASDKAK 531
           VP      T R  +   F R+ +   G A SD+A+
Sbjct: 148 VPYYRGFATQRGQKTVGFTRMFQLYRGYANSDRAQ 182

[112][TOP]
>UniRef100_Q117F9 Phycobilisome linker polypeptide n=1 Tax=Trichodesmium erythraeum
           IMS101 RepID=Q117F9_TRIEI
          Length = 264

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 54/152 (35%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
 Frame = +1

Query: 82  DGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMT 261
           D    + A  +QV GN Y+ E +        +  R  ++ ++E +R +AK+  Y+S F  
Sbjct: 30  DLQTVIRAVYKQVLGNEYMMESQRLHSP--EALLRNGSINVREFIRVVAKSPLYQSLFFH 87

Query: 262 PNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVV 435
            +S  R +ELN+KHLLGR P  QAE+S H       GYDA+ID+Y  + +Y + FG+++V
Sbjct: 88  SSSQNRFIELNFKHLLGRPPLDQAEISDHVLIYREQGYDAEIDSYLDSNDYINSFGEDIV 147

Query: 436 --PSTVFRGTYRSSEEFNRLCKSNAGPAASDK 525
             P  +       +E FNR      GPA SD+
Sbjct: 148 PYPRQIKSRRGMKTESFNRTFSLLRGPATSDR 179

[113][TOP]
>UniRef100_B2J467 Phycobilisome linker polypeptide CpeC n=1 Tax=Nostoc punctiforme
           PCC 73102 RepID=B2J467_NOSP7
          Length = 287

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 47/111 (42%), Positives = 71/111 (63%), Gaps = 2/111 (1%)
 Frame = +1

Query: 112 RQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVEL 291
           RQV GNAY+ E E   + V  SQF+   ++++E +R +AK+  Y SRF +    YR +EL
Sbjct: 40  RQVLGNAYVMESER--LTVPESQFKRGEISVREFIRLVAKSELYSSRFFSSCPRYRAIEL 97

Query: 292 NYKHLLGRGPTQ-AEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
           N++HLLGR P    E+ +H+  L   G++A+ID+Y  + EY   FG+N+VP
Sbjct: 98  NFRHLLGRAPIDFEEMRSHSTILDEKGFEAEIDSYLDSDEYQDTFGENIVP 148

[114][TOP]
>UniRef100_B1WT80 Phycocyanin associated linker protein n=1 Tax=Cyanothece sp. ATCC
           51142 RepID=B1WT80_CYAA5
          Length = 319

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 55/156 (35%), Positives = 85/156 (54%), Gaps = 6/156 (3%)
 Frame = +1

Query: 82  DGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMT 261
           D    + A  RQ+FGN Y+ + +    A   S     +++++E VR +AK+  Y+ +F  
Sbjct: 55  DAQGVIRAVYRQIFGNDYIMKSQRLISA--ESLLCNGSISVREFVRSVAKSELYKEKFFY 112

Query: 262 PNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVV 435
            N   R +ELNYKHLLGR P  ++E + H     + G+DADID+Y    EY   FG+N+V
Sbjct: 113 NNFQTRTIELNYKHLLGRAPYDESEFAYHLDLYQTQGFDADIDSYIDSGEYQENFGENIV 172

Query: 436 PSTVFRG----TYRSSEEFNRLCKSNAGPAASDKAK 531
           P   +RG      + +  F R+ +   G A SD+A+
Sbjct: 173 P--YYRGFNNQVGQKTVGFTRMFRLYRGYANSDRAQ 206

[115][TOP]
>UniRef100_A5GVN2 Phycobilisome linker polypeptide, C-phycoerythrin class
           I-associated n=1 Tax=Synechococcus sp. RCC307
           RepID=A5GVN2_SYNR3
          Length = 292

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 49/116 (42%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + A  RQV GNAY+ + E     V+ SQF+   ++++E VR LAK+  YR+RF    + Y
Sbjct: 35  IRAIYRQVLGNAYVMDSERQ--VVIESQFKLGEISVREFVRRLAKSDLYRTRFFDDCARY 92

Query: 277 RLVELNYKHLLGRGPTQ-AEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP 438
           R +EL ++HLLGR P    E+  H + L S GYDADID++   ++Y   FG+  VP
Sbjct: 93  RYIELAFRHLLGRAPVDFQEMRTHAERLDSHGYDADIDSFLDSSDYQDTFGEWTVP 148

[116][TOP]
>UniRef100_B5IPK4 Putative uncharacterized protein cpeC n=1 Tax=Cyanobium sp. PCC
           7001 RepID=B5IPK4_9CHRO
          Length = 283

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 58/148 (39%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + A  +QV GN Y+ + E   +    S F+   L+++E VR +AK+  YRS+F    + Y
Sbjct: 35  IRAVYKQVLGNQYIMQSER--LTQTESLFKHNLLSVREFVRQIAKSGLYRSKFFENCNPY 92

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPSTVF 450
             +ELN+KHLLGR P  +AE+  H   L   GYDA+ID+Y   +EY   FG+  VP  V 
Sbjct: 93  HFIELNHKHLLGRAPNNKAEMLHHFTILQEQGYDAEIDSYIDSSEYQQRFGEETVP-YVH 151

Query: 451 RGTYRSSEE---FNRLCKSNAGPAASDK 525
              Y S +E   F+ L +   G AAS K
Sbjct: 152 GWDYSSGQEGRQFSWLMQLARGVAASVK 179

[117][TOP]
>UniRef100_B7K6L6 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 8801
           RepID=B7K6L6_CYAP8
          Length = 255

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 54/157 (34%), Positives = 85/157 (54%), Gaps = 4/157 (2%)
 Frame = +1

Query: 91  VAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNS 270
           + +    +QV GN ++ + E    A   S+     L++++ VR +AK+  YR R+    +
Sbjct: 22  IVIRGVYKQVLGNPHVMDSERLVSA--ESRLGNGELSVRDFVRAVAKSEFYRRRYFQSCA 79

Query: 271 TYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVPST 444
            YR VELN+KHLLGR P  Q E+S H +  +  GY+A+ID+Y  + EY   FGDN+VP  
Sbjct: 80  PYRFVELNFKHLLGRAPQDQGELSCHIRLCIEQGYEAEIDSYLDSDEYQQKFGDNIVPYY 139

Query: 445 VFRGTYRSSEE--FNRLCKSNAGPAASDKAKRGLNML 549
               +   S++  +NR      G A  D A +G  ++
Sbjct: 140 QGIQSQVGSKQVGYNRTLSLYQGYAGVDSAFKGSRLV 176

[118][TOP]
>UniRef100_A5GJ12 Phycobilisome linker polypeptide, C-phycoerythrin class
           I-associated n=1 Tax=Synechococcus sp. WH 7803
           RepID=A5GJ12_SYNPW
          Length = 245

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 58/139 (41%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
 Frame = +1

Query: 28  ATYSSVDATIDAPRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMK 207
           AT SS+    +  R  A D    + AA RQVFGN YL E +      + + F   +L+++
Sbjct: 3   ATISSLRCDANQDRSQASD---IIRAAYRQVFGNRYLMELDVQPS--IEALFINGDLSVQ 57

Query: 208 ELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADI 384
            LV  LA++  YR  ++  NS YR VELN+KHLLGR P  QAE+S H + L   G+DA+I
Sbjct: 58  GLVTALAQSDTYRRLYLEANSPYRFVELNFKHLLGRPPRNQAEISEHVRLLADEGFDAEI 117

Query: 385 DTY-FGAEYDSLFGDNVVP 438
            +Y +  EY   FG + VP
Sbjct: 118 ASYTYSDEYLRNFGVDTVP 136

[119][TOP]
>UniRef100_Q05Q39 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. RS9916
           RepID=Q05Q39_9SYNE
          Length = 294

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 48/116 (41%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + A  +QV GNAY+ E E     +  SQF+   ++++ELVR +AK+  YR+RF    S Y
Sbjct: 37  IRAVYKQVLGNAYVMESERQ--LIPESQFKLGEISVRELVRRIAKSELYRNRFFDSCSRY 94

Query: 277 RLVELNYKHLLGRGPTQ-AEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP 438
           R +EL ++HL+GR P    E+ AH + L S G++ADID+Y   A+Y + +G+  VP
Sbjct: 95  RYIELAFRHLMGRAPEDFEEMRAHAERLDSQGFEADIDSYLDSADYQNAYGEWTVP 150

[120][TOP]
>UniRef100_O85492 35 k phycocyanin specific rod linker polypeptide n=1
           Tax=Synechocystis sp. PCC 9413 RepID=O85492_9SYNC
          Length = 287

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 4/157 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  D    ++A  RQ+ GN Y+   E    A   S      +T+K+ V  +AK+  Y
Sbjct: 25  PNFSQNDAKAVISAVYRQLLGNDYIMASERLTSA--ESLLCNGTITVKDFVSLVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + +F   N   R++ELNYKHLLGR P  ++EV  H     + GYDADID+Y  + EY+  
Sbjct: 83  KKKFFYNNFQTRVIELNYKHLLGRAPYDESEVIEHLDRYQNEGYDADIDSYINSQEYNDN 142

Query: 418 FGDNVVPSTVFRGTYRSSEE--FNRLCKSNAGPAASD 522
           FGD  VP      T R  +   F R+ +   G A+SD
Sbjct: 143 FGDYTVPYYRGFSTQRGQKTAGFPRMFQLYRGYASSD 179

[121][TOP]
>UniRef100_A4CSE9 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. WH 7805
           RepID=A4CSE9_SYNPV
          Length = 294

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 50/116 (43%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + A  +QV GNAY+ E E   VA   SQF+   ++++E VR +AK+  YR RF    + Y
Sbjct: 37  INAVYKQVLGNAYVMESERQLVA--ESQFKLGEISVREFVRMVAKSELYRGRFFDTCARY 94

Query: 277 RLVELNYKHLLGRGPTQ-AEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
           R +EL ++HLLGR P    E+ AH + L S GYDADID++  + +Y + FG+  VP
Sbjct: 95  RYIELAFRHLLGRAPVDFDEMRAHAERLDSKGYDADIDSFLDSDDYQNTFGEWTVP 150

[122][TOP]
>UniRef100_Q05Z85 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. BL107
           RepID=Q05Z85_9SYNE
          Length = 294

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 48/116 (41%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + A  +QV GNAY+ E E   VA   SQF+   ++++E VR +AK+  YRSRF    + Y
Sbjct: 37  IRAVYKQVLGNAYVMESERQLVA--ESQFKLGEISVREFVRRIAKSDLYRSRFFETCARY 94

Query: 277 RLVELNYKHLLGRGPTQ-AEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
           R +EL ++HL+GR P    E+  H++ L + GYDADID++    +Y + FG+ +VP
Sbjct: 95  RYIELAFRHLMGRAPIDFQEMRDHSERLDAKGYDADIDSFLDCDDYQNAFGEWIVP 150

[123][TOP]
>UniRef100_D0CKB3 Phycobilisome 32.1 kDa linker polypeptide,
           phycocyanin-associated,rod n=1 Tax=Synechococcus sp. WH
           8109 RepID=D0CKB3_9SYNE
          Length = 294

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + A  +QV GNAY+ + E   V    SQF+   ++++ELV  +AK+  YRSRF    + Y
Sbjct: 37  IRAVYKQVLGNAYVMDSERQIVE--ESQFKLGEISVRELVGRIAKSDLYRSRFFDSCARY 94

Query: 277 RLVELNYKHLLGRGPTQ-AEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP 438
           R +EL ++HLLGR P   AE+  H   L S GY+ADID++   AEY + FG+  VP
Sbjct: 95  RYIELAFRHLLGRAPADYAEMREHADRLDSQGYEADIDSFLNSAEYQNTFGEWTVP 150

[124][TOP]
>UniRef100_A8YJM9 CpcI protein n=1 Tax=Microcystis aeruginosa PCC 7806
           RepID=A8YJM9_MICAE
          Length = 292

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  D    + A  RQV GN Y+   E    A   S     ++T++E VR +AK+  Y
Sbjct: 25  PDWSRDDAQAVIRAVYRQVLGNDYIMRSERLTSA--ESLLCNGSITVREFVRAVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSL 417
           +++F   N   R++ELN KHLLGR P  ++EV  H     + G++ADID+Y   AEY   
Sbjct: 83  KNKFFYGNFQTRVIELNIKHLLGRAPYDESEVVYHLDLYENKGFEADIDSYIDSAEYTEN 142

Query: 418 FGDNVVPSTVFRG----TYRSSEEFNRLCKSNAGPAASDKAK 531
           FGD++VP   +RG      + +  F R+ +   G A SD+++
Sbjct: 143 FGDSIVP--YYRGFATQPGQKTVGFTRMFQLYRGYANSDRSQ 182

[125][TOP]
>UniRef100_Q3AMG2 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. CC9605
           RepID=Q3AMG2_SYNSC
          Length = 294

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + A  +QV GNAY+ + E   V    SQF+   ++++ELV  +AK+  YRSRF    S Y
Sbjct: 37  IRAVYKQVLGNAYVMDSERQIVE--ESQFKLGEISVRELVGRIAKSDLYRSRFFDNCSRY 94

Query: 277 RLVELNYKHLLGRGPTQ-AEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
           R +EL ++HLLGR P   AE+  H   L S GY+ADID++  + EY + FG+  VP
Sbjct: 95  RYIELAFRHLLGRAPADYAEMREHADRLDSQGYEADIDSFLNSEEYQNTFGEWTVP 150

[126][TOP]
>UniRef100_Q0ICT2 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. CC9311
           RepID=Q0ICT2_SYNS3
          Length = 294

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 47/119 (39%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           +  + A  +QV GNAY+ E E   +A   SQF+   ++++EL+R +AK+  YRSRF    
Sbjct: 34  EALIRAIYKQVLGNAYVMESERQLIA--ESQFKLGEISVRELIRRIAKSDLYRSRFFESC 91

Query: 268 STYRLVELNYKHLLGRGPTQ-AEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
             YR +EL ++H LGR P    E+ AH + L S G++ADID+Y  + +Y + +G+ +VP
Sbjct: 92  PRYRYIELAFRHFLGRAPVDFDEMRAHAERLDSLGFEADIDSYLDSDDYQNSYGEWIVP 150

[127][TOP]
>UniRef100_B1WT79 Phycocyanin associated linker protein n=1 Tax=Cyanothece sp. ATCC
           51142 RepID=B1WT79_CYAA5
          Length = 273

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 56/152 (36%), Positives = 86/152 (56%), Gaps = 4/152 (2%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           +VA+ AA RQV GN +L   E    A   S  R   +++K+ +R +A +  YR++F   N
Sbjct: 33  EVAIRAAYRQVLGNDHLMSCERLLSA--ESLLRNGAISVKDFIRAIALSELYRNKFFHSN 90

Query: 268 STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVPS 441
              R +ELNYKHLLGR P  Q+E++ H+      GY+A+I++Y  + EY   FGD +VP 
Sbjct: 91  PQNRFIELNYKHLLGRVPYDQSEIAYHSDLYHQEGYEAEINSYIDSLEYQENFGDRIVPY 150

Query: 442 TVFRGTYRSSEE--FNRLCKSNAGPAASDKAK 531
                + R+ +   F+R  +   G A SD+A+
Sbjct: 151 CRGFSSQRNQKTVGFSRTFQLYRGYANSDRAQ 182

[128][TOP]
>UniRef100_B9YQR0 Phycobilisome linker polypeptide n=1 Tax='Nostoc azollae' 0708
           RepID=B9YQR0_ANAAZ
          Length = 277

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 60/153 (39%), Positives = 85/153 (55%), Gaps = 13/153 (8%)
 Frame = +1

Query: 109 IRQVFGNAY--LFEEEAADVAVLTSQ----FRGRNLTMKELVRGLAKTAAYRSRFMTPNS 270
           ++Q+F  AY  +F  E   V+ + S      R   +++++ V+ L K+  Y+ RF   NS
Sbjct: 30  LQQIFKAAYEHVFGRERVYVSGIFSSAEAMLRNGKISVRQFVQTLVKSEFYKERFFYNNS 89

Query: 271 TYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVPST 444
             R +ELNYKHLLGR P  Q+E++ H     S GYDADID+Y  + EY++ FGDN VP  
Sbjct: 90  QIRFIELNYKHLLGRAPYDQSEIAYHVDLYASQGYDADIDSYIDSQEYNNAFGDNTVP-- 147

Query: 445 VFRGTYRS-----SEEFNRLCKSNAGPAASDKA 528
            +RG ++S        FNRL     G   SD A
Sbjct: 148 YYRG-FKSIPGMKQIGFNRLFTLYRGNGNSDNA 179

[129][TOP]
>UniRef100_B2BN82 CpcH n=1 Tax=Arthrospira platensis Sp-9 RepID=B2BN82_SPIPL
          Length = 271

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 62/156 (39%), Positives = 83/156 (53%), Gaps = 6/156 (3%)
 Frame = +1

Query: 82  DGDV--AVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRF 255
           +GDV   + AA RQV G  +L + E    A   S  R   +T+++ VR LA +  YR +F
Sbjct: 29  EGDVQAVIWAAYRQVMGIEHLMQRERLTSA--ESLLRQDEITVRDFVRALAVSELYRKKF 86

Query: 256 MTPNSTYRLVELNYKHLLGRGPTQAEVSA-HTQTLMSAGYDADIDTYFGA-EYDSLFGDN 429
              NS  R +ELNYKHLLGR P    V A H       GY+A+I++Y  + EY   FG N
Sbjct: 87  FYGNSQVRFIELNYKHLLGRAPYDESVIAFHVDLYNEEGYEAEINSYLDSPEYLESFGQN 146

Query: 430 VVPSTVFRGTYRS--SEEFNRLCKSNAGPAASDKAK 531
           VVP      T R   +  FNR+ +   G A SD+A+
Sbjct: 147 VVPYYRGFATQRGQWTVGFNRMFQLYRGYANSDRAQ 182

[130][TOP]
>UniRef100_A3Z933 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. RS9917
           RepID=A3Z933_9SYNE
          Length = 280

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 50/121 (41%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
 Frame = +1

Query: 82  DGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMT 261
           D    + AA +QVFG  Y+   +  +     S FR   L+ +E VR LAK+  YR RF  
Sbjct: 29  DRTALIRAAYQQVFGYQYILSSDRLEGP--ESLFRRGYLSTREFVRQLAKSGLYRKRFFE 86

Query: 262 PNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVV 435
            ++ YR +ELN+KHLLGR P  +AE+  H   L   G++A+ID+Y   A+Y   FG+ VV
Sbjct: 87  NSNPYRFIELNHKHLLGRAPQNKAEMLHHFTILQEQGFEAEIDSYIDSADYQERFGEEVV 146

Query: 436 P 438
           P
Sbjct: 147 P 147

[131][TOP]
>UniRef100_A3YUR5 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. WH 5701
           RepID=A3YUR5_9SYNE
          Length = 283

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 53/124 (42%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
 Frame = +1

Query: 73  SAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSR 252
           +A D    V A  RQV G  Y+ E E   +A   S F    L+++ELVR +AK+  YR +
Sbjct: 27  TAQDKATIVRAVYRQVLGFQYVMESER--LAGAESLFNNGYLSVRELVRTVAKSGLYRVK 84

Query: 253 FMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGD 426
           F    + Y  +ELN+KHLLGR P ++AE+  H   L   GYDA+ID+Y   AEY + FG+
Sbjct: 85  FFENCNPYHFIELNHKHLLGRAPQSKAEMLHHFTILQDEGYDAEIDSYIDSAEYQNRFGE 144

Query: 427 NVVP 438
             VP
Sbjct: 145 EQVP 148

[132][TOP]
>UniRef100_B0JHB8 Phycobilisome rod linker polypeptide n=1 Tax=Microcystis aeruginosa
           NIES-843 RepID=B0JHB8_MICAN
          Length = 292

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 58/162 (35%), Positives = 86/162 (53%), Gaps = 6/162 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  S  D    + A  RQV GN Y+   E    A   S     ++T +E VR +AK+  Y
Sbjct: 25  PDWSRDDAQAVIRAVYRQVLGNDYIMRSERLTSA--ESLLCNGSITAREFVRAVAKSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSL 417
           +++F   N   R++ELN KHLLGR P  ++EV  H     + G++ADID+Y   AEY   
Sbjct: 83  KNKFFYGNFQTRVIELNIKHLLGRAPYDESEVVYHLDLYENKGFEADIDSYIDSAEYTEN 142

Query: 418 FGDNVVPSTVFRG----TYRSSEEFNRLCKSNAGPAASDKAK 531
           FGD++VP   +RG      + +  F R+ +   G A SD+++
Sbjct: 143 FGDSIVP--YYRGFASQPGQKTVGFTRMFQLYRGYANSDRSQ 182

[133][TOP]
>UniRef100_B5IMB4 Putative uncharacterized protein n=1 Tax=Cyanobium sp. PCC 7001
           RepID=B5IMB4_9CHRO
          Length = 307

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 49/121 (40%), Positives = 71/121 (58%), Gaps = 2/121 (1%)
 Frame = +1

Query: 82  DGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMT 261
           D    + A  +QV GN Y+ + E  +   L S FR  +L+++E VR +AK+  Y+ +F  
Sbjct: 30  DRATIIRAVYQQVLGNQYIMKSERLEG--LESLFRNGDLSVREFVRLVAKSGLYKEKFFE 87

Query: 262 PNSTYRLVELNYKHLLGRGPTQA-EVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVV 435
             + YR +ELN+KHLLGR P  + E+  H   L   GYDA+ID+Y  + EY   FG +VV
Sbjct: 88  NCNPYRFIELNFKHLLGRAPNNSQEMLDHFTILQDQGYDAEIDSYVDSDEYQHRFGQDVV 147

Query: 436 P 438
           P
Sbjct: 148 P 148

[134][TOP]
>UniRef100_Q4C213 Phycobilisome linker polypeptide n=1 Tax=Crocosphaera watsonii WH
           8501 RepID=Q4C213_CROWT
          Length = 352

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
 Frame = +1

Query: 31  TYSSVDATIDAPRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKE 210
           ++  +D     P     D +  +    +QV GNA+L E E   +  L SQ +G  ++++E
Sbjct: 15  SFDKIDHLEFIPGSDENDIETIIRGVYKQVLGNAHLMESER--LISLESQVKGGEISVRE 72

Query: 211 LVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGPTQ-AEVSAHTQTLMSAGYDADID 387
            VR +A +  YRS F      YR +ELN+KHLLGR P   +E   H+Q L   G+ A+ID
Sbjct: 73  FVRQVAYSQLYRSLFFETCPRYRSIELNFKHLLGRAPNDYSETFHHSQILDDGGWFAEID 132

Query: 388 TYFGA-EYDSLFGDNVVP 438
           +Y  + EY   FG+N+VP
Sbjct: 133 SYIDSDEYQDNFGENIVP 150

[135][TOP]
>UniRef100_B2BN85 CpcH n=1 Tax=Arthrospira platensis Sp-10 RepID=B2BN85_SPIPL
          Length = 271

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 50/127 (39%), Positives = 71/127 (55%), Gaps = 2/127 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + AA RQV GN +L + E    A   S  R   +T+++ VR LA +  Y
Sbjct: 25  PNFTEGDVQAVIWAAYRQVMGNEHLMQRERLTSA--ESLLRQGEITVRDFVRALAVSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F   NS  R +ELNYKHLLGR P  ++E++ H       GY+A+I++Y  + EY   
Sbjct: 83  RKKFFYGNSQVRFIELNYKHLLGRAPYDESEIAFHVDLYNEEGYEAEINSYHDSPEYLES 142

Query: 418 FGDNVVP 438
           FG+N VP
Sbjct: 143 FGENEVP 149

[136][TOP]
>UniRef100_A3YYJ2 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. WH 5701
           RepID=A3YYJ2_9SYNE
          Length = 311

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 53/124 (42%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
 Frame = +1

Query: 73  SAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSR 252
           S  D    + A  +QV G  Y+   E  + A   S FR   L ++ELVR +AK+  YRSR
Sbjct: 27  SEQDTKQIIRAVYQQVLGQQYVMASERLNGA--ESLFRNGALNVRELVRTVAKSGLYRSR 84

Query: 253 FMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGD 426
           F    + YR +ELN+KHLLGR P  +AE+  H   L   GYDA+ID+Y  + EY   FG 
Sbjct: 85  FFENCNPYRFIELNHKHLLGRAPQNKAEMLHHFTILQDQGYDAEIDSYIDSDEYQERFGL 144

Query: 427 NVVP 438
           + VP
Sbjct: 145 DTVP 148

[137][TOP]
>UniRef100_B1X535 Phycobilisome linker polypeptide n=1 Tax=Paulinella chromatophora
           RepID=B1X535_PAUCH
          Length = 281

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 52/127 (40%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
 Frame = +1

Query: 70  LSAWDGDVA--VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           L++ + DVA  + A   QV GN ++   E    A   S FR   L+ +E VR +AK+  Y
Sbjct: 24  LNSSEADVAALIRAVYEQVLGNQHIMSSERLKSA--ESLFRRGYLSTREFVRQVAKSGLY 81

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSL 417
           RS+F    + Y+ +ELN+KHLLGR P  +AE+  H   L   G+DA+ID+Y   AEY   
Sbjct: 82  RSKFFEDCNPYKFIELNHKHLLGRAPQNKAEMLHHFTILQEKGFDAEIDSYIDSAEYQDR 141

Query: 418 FGDNVVP 438
           FG+  VP
Sbjct: 142 FGEETVP 148

[138][TOP]
>UniRef100_B5IPK0 Putative uncharacterized protein n=1 Tax=Cyanobium sp. PCC 7001
           RepID=B5IPK0_9CHRO
          Length = 281

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 48/121 (39%), Positives = 71/121 (58%), Gaps = 2/121 (1%)
 Frame = +1

Query: 82  DGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMT 261
           D  + + A  +QV GN Y+ + E  +     S F+   L+++E VR +AK+  Y+ +F  
Sbjct: 30  DKALLIRAVYKQVLGNQYVMKSERLEGP--ESLFKRGYLSVREFVRQVAKSGLYKQKFFE 87

Query: 262 PNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVV 435
             + YR +ELN+KHLLGR P  +AE+  H   L   G+DA+ID+Y   AEY   FG+ VV
Sbjct: 88  NCNPYRFIELNFKHLLGRAPQNKAEMLHHFTILQEQGFDAEIDSYIDSAEYQERFGEEVV 147

Query: 436 P 438
           P
Sbjct: 148 P 148

[139][TOP]
>UniRef100_Q05Q41 Possible phycobilisome linker polypeptide n=1 Tax=Synechococcus sp.
           RS9916 RepID=Q05Q41_9SYNE
          Length = 243

 Score = 86.3 bits (212), Expect = 1e-15
 Identities = 58/160 (36%), Positives = 85/160 (53%), Gaps = 7/160 (4%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           +    +QVFGN +L E +      L + F   +LT++  V  LA++  Y+  F+  N+ Y
Sbjct: 21  IQGTYKQVFGNRHLMELDVNKS--LEALFINGDLTVQGFVTALAQSDTYKKLFLENNNAY 78

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTY-FGAEYDSLFGDNVVP---- 438
           R VELN+KHLLGR P  Q EV  H + L   GYDA+I++Y +  EY + FG + VP    
Sbjct: 79  RFVELNFKHLLGRSPHDQTEVMEHVRRLHEEGYDAEIESYIYSEEYLTAFGVDQVPYNRS 138

Query: 439 -STVFRGTYRSSEEFNRLCKSNAGPAASDKAKRGLNMLVT 555
             TV  G   +    N L    AG   ++++ + LN L T
Sbjct: 139 KQTVAGGRTINFTRSNILDAGYAGFDGAEQSSKLLNSLTT 178

[140][TOP]
>UniRef100_A3YUR9 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. WH 5701
           RepID=A3YUR9_9SYNE
          Length = 281

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 58/164 (35%), Positives = 89/164 (54%), Gaps = 7/164 (4%)
 Frame = +1

Query: 73  SAWDGDVA--VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYR 246
           +A + D+A  + +  +QV G  Y+ + E  +     S FR   L+++E VR +AK+  YR
Sbjct: 25  NATEADIAGLIRSVYQQVLGYQYVMKSERLEGP--ESLFRRGYLSVREFVRQVAKSNLYR 82

Query: 247 SRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLF 420
            RF   ++ YR +ELN+KHLLGR P  +AE+  H   L + G+DA+ID+Y   AEY   F
Sbjct: 83  QRFFENSNPYRFIELNHKHLLGRAPQNKAEMLHHFTILQNEGFDAEIDSYIDSAEYQDRF 142

Query: 421 GDNVVPSTVFRGTYRSSE---EFNRLCKSNAGPAASDKAKRGLN 543
           G+  VP  +    Y   +   +F+ + +   G AAS K     N
Sbjct: 143 GEEQVP-YLHGWNYSVGQQGLQFSYMLQLTRGAAASIKGDTSKN 185

[141][TOP]
>UniRef100_D0CKB5 Phycobilisome linker polypeptide, C-phycoerythrin class
           I-associated n=1 Tax=Synechococcus sp. WH 8109
           RepID=D0CKB5_9SYNE
          Length = 247

 Score = 85.5 bits (210), Expect = 2e-15
 Identities = 67/179 (37%), Positives = 93/179 (51%), Gaps = 4/179 (2%)
 Frame = +1

Query: 25  PATYSSVDATIDAPRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTM 204
           P T SS  A +D    +    DV +    RQVFGN +L E +      + + F   +LT+
Sbjct: 4   PTTLSSA-ANVDTSHAA----DV-IRQTYRQVFGNRHLMELDVNPS--IEALFINGDLTV 55

Query: 205 KELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDAD 381
           + LV  LA++  Y+  F+  NS YR VELN+KHLLGR P  QAE+  H + L   GY+A+
Sbjct: 56  QGLVTALAQSETYKKLFLENNSPYRFVELNFKHLLGRPPRDQAELMGHVRLLQEEGYEAE 115

Query: 382 IDTY-FGAEYDSLFGDNVVPSTVFRGTY--RSSEEFNRLCKSNAGPAASDKAKRGLNML 549
           I +Y +  EY S FG + VP      T    S+  F R    +AG A  D A+    +L
Sbjct: 116 IASYTYSDEYLSAFGIDQVPYNRATQTLVGGSTLFFTRAKALDAGFAGYDNAETDSKLL 174

[142][TOP]
>UniRef100_Q3AWD2 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. CC9902
           RepID=Q3AWD2_SYNS9
          Length = 294

 Score = 85.1 bits (209), Expect = 3e-15
 Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + A  +QV GNAY+ E E     V  SQF+   ++++E VR +AK+  YRSR     + Y
Sbjct: 37  IRAVYKQVLGNAYVMESERQ--LVPESQFKLGEISVREFVRRIAKSDLYRSRLFETCARY 94

Query: 277 RLVELNYKHLLGRGPTQ-AEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
           R +EL ++HL+GR P    E+  H++ L + GYDADID++    +Y + FG+ +VP
Sbjct: 95  RYIELAFRHLMGRAPIDFQEMRDHSERLDAKGYDADIDSFLDCDDYQNAFGEWIVP 150

[143][TOP]
>UniRef100_B4WGJ3 Phycobilisome Linker polypeptide domain protein n=1
           Tax=Synechococcus sp. PCC 7335 RepID=B4WGJ3_9SYNE
          Length = 253

 Score = 85.1 bits (209), Expect = 3e-15
 Identities = 47/121 (38%), Positives = 72/121 (59%), Gaps = 2/121 (1%)
 Frame = +1

Query: 82  DGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMT 261
           D +  + AA +QV GN ++ E +  + A   S  R  ++T++  VR +AK+  YRS F  
Sbjct: 21  DLETIIQAAYKQVLGNHHIMESQRLESA--ESLLRNGDITVRGFVRAVAKSDLYRSLFFE 78

Query: 262 PNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVV 435
            +S Y  +E N+++LLGR P  Q+E+SAHT    + GY+ +ID+Y  + EY   FG N V
Sbjct: 79  ASSAYTFIEKNFQNLLGRAPEDQSEISAHTAIYSTRGYEGEIDSYLDSDEYWQNFGGNTV 138

Query: 436 P 438
           P
Sbjct: 139 P 139

[144][TOP]
>UniRef100_P11401 Phycobilisome 37.5 kDa linker polypeptide, phycocyanin-associated,
           rod n=2 Tax=Microchaetaceae RepID=PYR5_FREDI
          Length = 269

 Score = 85.1 bits (209), Expect = 3e-15
 Identities = 58/165 (35%), Positives = 89/165 (53%), Gaps = 8/165 (4%)
 Frame = +1

Query: 61  APRLSAWDGDVAVAA--AIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKT 234
           AP       DV  AA   + QVFGN ++ + E    A   S  +  N+++++ VR LA++
Sbjct: 19  APTELRASSDVIHAAYRQVFQVFGNDHVMQSERLTSA--ESLLQQGNISVRDFVRLLAQS 76

Query: 235 AAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEY 408
             YR +F       R +ELNYKHLLGR P  ++E+S H       GY+A+I++Y   AEY
Sbjct: 77  ELYRQKFFYSTPQVRFIELNYKHLLGRAPYDESEISYHVNLYTEKGYEAEINSYIDSAEY 136

Query: 409 DSLFGDNVVPSTVFRG----TYRSSEEFNRLCKSNAGPAASDKAK 531
              FG+ +VP   +RG      + +  FNR+ +   G A SD+++
Sbjct: 137 QESFGERIVPH--YRGFETQPGQKTVGFNRMFQIYRGYANSDRSQ 179

[145][TOP]
>UniRef100_Q7XY80 Phycobilisome 31.8kD linker polypeptide (Fragment) n=1
           Tax=Griffithsia japonica RepID=Q7XY80_GRIJA
          Length = 323

 Score = 84.7 bits (208), Expect = 4e-15
 Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
 Frame = +1

Query: 82  DGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMT 261
           D +V + A   Q+F NAY+ E E A++A   S+FR   LT+K+  R +AK+  Y+ RF  
Sbjct: 28  DYEVIIRACYLQIFANAYIMESERAEMAKAESEFRDGRLTVKDFCRAIAKSYQYKKRFFD 87

Query: 262 PNSTYRLVELNYKHLLGRGPTQAE-VSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVV 435
               Y  +EL +KH+LGR P   E   A +    + GY++ ID +F   EYD+ F +  V
Sbjct: 88  GRPLYGAIELCFKHILGRTPDGLEHYRAKSAVYDTKGYESFIDAFFDDGEYDAYFDEFCV 147

Query: 436 PSTVFRGTYRSS 471
           P   +RG   +S
Sbjct: 148 P--FYRGHLTTS 157

[146][TOP]
>UniRef100_Q31PD9 Phycobilisome rod linker polypeptide n=2 Tax=Synechococcus
           elongatus RepID=Q31PD9_SYNE7
          Length = 289

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 9/163 (5%)
 Frame = +1

Query: 82  DGD-----VAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYR 246
           DGD       + A  RQV GN Y+ + E    A   S     ++++++ VR +AK+  Y+
Sbjct: 26  DGDRDQVQAVIRAVYRQVLGNDYIMKSERLTAA--ESLLVNGSISVRDFVRAVAKSELYK 83

Query: 247 SRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLF 420
           ++F   N   R++EL+ KHLLGR P ++AEV  H     + GYDAD+D+Y   +EY   F
Sbjct: 84  TKFFYNNFQTRVIELHCKHLLGRAPYSEAEVIEHLDRYETQGYDADVDSYIDSSEYLETF 143

Query: 421 GDNVVP--STVFRGTYRSSEEFNRLCKSNAGPAASDKAKRGLN 543
           G+++VP    +     + S    RL     G A SD+   G N
Sbjct: 144 GESIVPYYRDIEYHVGQQSVGLPRLFSLYRGYATSDRTSLGGN 186

[147][TOP]
>UniRef100_Q44113 33 kD rod-rod linker n=1 Tax=Synechococcus elongatus PCC 6301
           RepID=Q44113_SYNP6
          Length = 289

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 9/163 (5%)
 Frame = +1

Query: 82  DGD-----VAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYR 246
           DGD       + A  RQV GN Y+ + E    A   S     ++++++ VR +AK+  Y+
Sbjct: 26  DGDRDQVQAVIRAVYRQVLGNDYIMKSERLTAA--ESLLVNGSISVRDFVRAVAKSELYK 83

Query: 247 SRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLF 420
           ++F   N   R++EL+ KHLLGR P ++AEV  H     + GYDAD+D+Y   +EY   F
Sbjct: 84  TKFFYNNFQTRVIELHCKHLLGRAPYSEAEVIEHLDRYETQGYDADVDSYIDSSEYLETF 143

Query: 421 GDNVVP--STVFRGTYRSSEEFNRLCKSNAGPAASDKAKRGLN 543
           G+++VP    +     + S    RL     G A SD+   G N
Sbjct: 144 GESIVPYYRDIEYHVGQQSVGLPRLFSLYRGYATSDRTSLGGN 186

[148][TOP]
>UniRef100_B4VWT2 Phycobilisome Linker polypeptide domain protein n=1 Tax=Microcoleus
           chthonoplastes PCC 7420 RepID=B4VWT2_9CYAN
          Length = 273

 Score = 83.6 bits (205), Expect = 9e-15
 Identities = 50/154 (32%), Positives = 84/154 (54%), Gaps = 4/154 (2%)
 Frame = +1

Query: 82  DGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMT 261
           D  + + AA  QVFGN  L E +    A   S  R   +++++ +R L ++  YR +F  
Sbjct: 31  DLQLVIRAAYLQVFGNDNLMEFDRLTSA--ESLLRHGEISVRDFIRTLGQSELYREKFFY 88

Query: 262 PNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVV 435
                R +ELNYKH LGR P  Q+E++ HT      GY+A+I++Y  + EY   FG+++V
Sbjct: 89  STPQVRFIELNYKHFLGRAPYDQSEIAYHTDLYNQQGYEAEINSYIDSMEYQENFGESIV 148

Query: 436 PSTVFRGTYRSSEE--FNRLCKSNAGPAASDKAK 531
           P  +   T R+ +   ++R+ +   G  +SD+ +
Sbjct: 149 PYPIGFETQRNQKTVGYSRIFQLFGGLGSSDRTQ 182

[149][TOP]
>UniRef100_Q0ICT4 Possible phycobilisome linker polypeptide n=1 Tax=Synechococcus sp.
           CC9311 RepID=Q0ICT4_SYNS3
          Length = 244

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 4/150 (2%)
 Frame = +1

Query: 112 RQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVEL 291
           RQVFGN +L E +      L + F   +LT++  V  LA++  Y+  F+  NS Y+ VEL
Sbjct: 27  RQVFGNRHLMELDINQS--LEALFINGDLTVQGFVTALAQSDTYKKLFLETNSPYKFVEL 84

Query: 292 NYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTY-FGAEYDSLFGDNVVPSTVFRGTYR 465
           N+KHLLGR P  Q+E+  H + L   GY+ +I +Y +  EY + FG + VP +    T +
Sbjct: 85  NFKHLLGRAPHDQSEIMEHVKLLSEEGYENEIASYTYSEEYLTAFGIDQVPYSRGSNTMQ 144

Query: 466 --SSEEFNRLCKSNAGPAASDKAKRGLNML 549
             S+  + R   S  G A  D A++   +L
Sbjct: 145 GGSTINYTRTNASEVGYAGYDGAQKSSRLL 174

[150][TOP]
>UniRef100_Q7U4R3 Possible phycobilisome linker polypeptide n=1 Tax=Synechococcus sp.
           WH 8102 RepID=Q7U4R3_SYNPX
          Length = 244

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 59/172 (34%), Positives = 86/172 (50%), Gaps = 10/172 (5%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P +      V V    RQVFGN +L E +    + + + F   +LT++  V  LA++  Y
Sbjct: 11  PNVDTSHAAVVVQQTYRQVFGNRHLMELDVN--SSIEALFMNGDLTVQGFVMALAQSDTY 68

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTY-FGAEYDSL 417
           +  F   NS Y+ VELN+KHLLGR P  Q E+  H + L   G++A+I +Y +  EY S 
Sbjct: 69  KKLFFETNSPYQFVELNFKHLLGRPPHDQVELMNHVRLLQDEGFEAEIASYVYSEEYLSA 128

Query: 418 FGDNVVPSTVFRGTYRSSE--------EFNRLCKSNAGPAASDKAKRGLNML 549
           FG + VP        R+SE         + R    +AG A  D A+R   +L
Sbjct: 129 FGVDQVPYN------RASESMVGGRTLNYTRSRVVDAGYAGYDSAERQSKLL 174

[151][TOP]
>UniRef100_Q10XB1 Phycobilisome linker polypeptide n=1 Tax=Trichodesmium erythraeum
           IMS101 RepID=Q10XB1_TRIEI
          Length = 253

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + A  +QV GN ++ E +    A   S F G   ++++ V  +A++  Y S F    S Y
Sbjct: 26  IRAVYKQVLGNIHVMESQRLISA--ESLFIGGEFSVRQFVNMVAQSDLYFSLFFESCSPY 83

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVPSTVF 450
           R VELN+KHLLGR P  QAE+S H       GY+A+I++Y  + EY   FG+N+VP    
Sbjct: 84  RFVELNFKHLLGRAPQDQAEISQHICIYNEKGYEAEINSYTDSYEYLQNFGENIVPYPQG 143

Query: 451 RGTYRSSEE--FNRLCKSNAGPAASDKAK 531
             T    +   FNR      G A SD+ K
Sbjct: 144 TSTVVGMKNITFNRTFALERGNATSDRNK 172

[152][TOP]
>UniRef100_A5GTT7 Phycobilisome linker polypeptide, C-phycoerythrin class
           II-associated n=1 Tax=Synechococcus sp. RCC307
           RepID=A5GTT7_SYNR3
          Length = 310

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 49/117 (41%), Positives = 69/117 (58%), Gaps = 2/117 (1%)
 Frame = +1

Query: 94  AVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNST 273
           A+ AA R + GN Y+ + E A  A L SQ    +L+++E VR L K   Y+ RF +  S 
Sbjct: 79  AIHAAYRHLHGNCYVMDNERA--AELESQLSHGSLSIREFVRALVKRDFYKDRFFSVVSP 136

Query: 274 YRLVELNYKHLLGRGPT-QAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP 438
           +R +EL +KHLLGR P  Q E+SA   T  + G+DA +D+    AEY  +FG + VP
Sbjct: 137 HRGIELTFKHLLGRPPLHQQEISAAIATQAAHGFDALVDSLMDSAEYSEVFGADTVP 193

[153][TOP]
>UniRef100_Q3AZR5 Putative uncharacterized protein n=1 Tax=Synechococcus sp. CC9902
           RepID=Q3AZR5_SYNS9
          Length = 298

 Score = 80.5 bits (197), Expect = 8e-14
 Identities = 56/152 (36%), Positives = 83/152 (54%), Gaps = 7/152 (4%)
 Frame = +1

Query: 94  AVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNST 273
           A+ AA   V+GNA+L + E +    L SQ     + +K+ V+G+AK+  Y+  F T  S 
Sbjct: 78  AIEAAYAHVYGNAHLMDYERS--VELESQLLNGEIAIKDFVKGIAKSEFYQRNFYTNCSP 135

Query: 274 YRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPSTV 447
            R +EL++KHLLGR P +Q+E+S+       +G+ A ID     AEY   FG + VP   
Sbjct: 136 MRTIELDFKHLLGRVPYSQSEISSLIALQAESGHGAVIDAMVDSAEYLETFGKHTVP--- 192

Query: 448 FRGTYRSSE-----EFNRLCKSNAGPAASDKA 528
           +  +++SS       FNR    + G A SDKA
Sbjct: 193 YMRSWKSSAGAPQVTFNRTAAMSLGYAYSDKA 224

[154][TOP]
>UniRef100_Q7U4S4 Possible phycobilisome linker polypeptide n=1 Tax=Synechococcus sp.
           WH 8102 RepID=Q7U4S4_SYNPX
          Length = 300

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 61/161 (37%), Positives = 83/161 (51%), Gaps = 6/161 (3%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           +VA+ AA RQV GN  L    +     L SQ +   +++++ V GLAK+  YR  + +  
Sbjct: 96  EVAIEAAYRQVLGN--LGPTISQKCIELESQLKNGEISVRDFVAGLAKSDLYRENYFSKV 153

Query: 268 STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPS 441
           S  R +ELNYKHLLGR P  QAEVSA    + S G++A ID      EY  +FG + VP 
Sbjct: 154 SPIRGIELNYKHLLGRPPINQAEVSAAISLIASKGFNAFIDQITRSGEYLEVFGTDTVPY 213

Query: 442 ----TVFRGTYRSSEEFNRLCKSNAGPAASDKAKRGLNMLV 552
               T     Y S+  F  L +   G A+SD      + LV
Sbjct: 214 LRAWTSEARAYCST--FANLARVTPGNASSDTIVERRSQLV 252

[155][TOP]
>UniRef100_Q05Z97 C-phycoerythrin class II gamma chain, linker polypeptide n=1
           Tax=Synechococcus sp. BL107 RepID=Q05Z97_9SYNE
          Length = 243

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 49/116 (42%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           +AAA RQV GN  L   E+     L ++     +T+++ V GLAK+  Y+S F       
Sbjct: 34  IAAAYRQVLGN--LHPRESQRETSLEARLLNGEITVRDFVNGLAKSDFYKSNFFHSVGAQ 91

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP 438
           R VELN+KHLLGR P  QAEV  H +     G+DA ID     AEY  +FG ++VP
Sbjct: 92  RGVELNFKHLLGRAPLNQAEVQDHIKLQAEEGFDALIDKLTDSAEYTEVFGSDIVP 147

[156][TOP]
>UniRef100_B4WG60 Phycobilisome Linker polypeptide domain protein n=1
           Tax=Synechococcus sp. PCC 7335 RepID=B4WG60_9SYNE
          Length = 272

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 52/161 (32%), Positives = 85/161 (52%), Gaps = 6/161 (3%)
 Frame = +1

Query: 67  RLSAWDGDVA--VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAA 240
           R +A + D+   + A  RQV GN ++   E   +    S  R  ++ + + VR LA +  
Sbjct: 24  RHNASESDIQGIIWATYRQVLGNDHVMSAER--LISSESLLRQGHIRVCDFVRTLALSEL 81

Query: 241 YRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDS 414
           Y+ +F       R +ELN+KHLLGR P  ++E++ H    +  GY+A+I++Y   AEY  
Sbjct: 82  YKEKFFYSTPNVRFIELNFKHLLGRAPYDESEITEHVNLYIQQGYEAEINSYIDSAEYQD 141

Query: 415 LFGDNVVPSTVFRGTYRSSEE--FNRLCKSNAGPAASDKAK 531
            FG+ +VP      T R  +   F R+ +   G A+SD+A+
Sbjct: 142 NFGEQIVPYYRGFATQRGQKTVGFGRIFQLYRGVASSDRAR 182

[157][TOP]
>UniRef100_A3Z2Q0 C-phycoerythrin class II gamma chain, linker polypeptide n=1
           Tax=Synechococcus sp. WH 5701 RepID=A3Z2Q0_9SYNE
          Length = 294

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 49/116 (42%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           +AAA RQV GN  L   E+     L ++     +T+++ V GLAK+  Y+S F       
Sbjct: 85  IAAAYRQVLGN--LHPRESQRETSLEARLLNGEITVRDFVNGLAKSDFYKSNFFHSVGAQ 142

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP 438
           R VELN+KHLLGR P  QAEV  H +     G+DA ID     AEY  +FG ++VP
Sbjct: 143 RGVELNFKHLLGRAPLNQAEVQDHIKLQAEEGFDALIDKLTDSAEYTEVFGSDIVP 198

[158][TOP]
>UniRef100_Q3AWE4 Possible phycobilisome linker polypeptide n=1 Tax=Synechococcus sp.
           CC9902 RepID=Q3AWE4_SYNS9
          Length = 300

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 60/158 (37%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + AA RQVFGN  L   E      L SQ    ++++++ V GLAK+  Y+  +    S  
Sbjct: 99  ITAAYRQVFGN--LGPTENQRCTELESQLMNGDISVRDFVAGLAKSDLYKQNYYFKVSPI 156

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPS--- 441
           R +ELNYKHLLGR P  QAEVSA    +   G+D  ++      EY  +FG + VP    
Sbjct: 157 RGIELNYKHLLGRPPLNQAEVSAAITVIAEHGFDGLVEKLTRSGEYLEVFGTDTVPYLRA 216

Query: 442 -TVFRGTYRSSEEFNRLCKSNAGPAASDKAKRGLNMLV 552
            T   G Y S+  F  L +   G AASD    G + LV
Sbjct: 217 WTSAAGAYCST--FVNLGRVTPGNAASDTTIEGRSQLV 252

[159][TOP]
>UniRef100_A5GVP4 C-phycoerythrin class II gamma chain, linker n=1 Tax=Synechococcus
           sp. RCC307 RepID=A5GVP4_SYNR3
          Length = 293

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 52/153 (33%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + AA RQVFGN    E +      L ++     +T+++ V GLAK+  Y++ F       
Sbjct: 85  IIAAYRQVFGNLPPTENQRE--TSLEARLMNGEITVRDFVNGLAKSDFYKANFFHAVGAQ 142

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPSTVF 450
           R +ELN+KHLLGR P  Q EV AH +    AG+DA +D     AEY  +FG ++VP    
Sbjct: 143 RGIELNFKHLLGRAPLNQTEVQAHIKVQAEAGFDALVDVITDSAEYAEVFGADIVPYNRS 202

Query: 451 RGTYRS--SEEFNRLCKSNAGPAASDKAKRGLN 543
           + +Y    +  FN + +      A     +G N
Sbjct: 203 QDSYAGMFTRTFNLMRELGGNKVAISDNAQGRN 235

[160][TOP]
>UniRef100_B2BN73 CpcH n=1 Tax=Arthrospira platensis Sp-5 RepID=B2BN73_SPIPL
          Length = 270

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 56/160 (35%), Positives = 77/160 (48%), Gaps = 4/160 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + AA RQV GN +L  E       L  Q     +T+++ VR LA +  Y
Sbjct: 25  PNFTEGDVQAVIWAAYRQVLGNEHLQRERLTSAESLLRQ---GEITVRDFVRALAVSELY 81

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGPTQAEVSA-HTQTLMSAGYDADIDTYFGA-EYDSL 417
             +    NS  R +EL YKHLLG  P    V A H        Y+A+I++Y  + EY   
Sbjct: 82  WKKIFYGNSQVRFIELYYKHLLGPAPLDESVMAFHVDLYNEEAYEAEINSYLDSPEYLES 141

Query: 418 FGDNVVPSTVFRGTYRS--SEEFNRLCKSNAGPAASDKAK 531
           FG+NVVP      T R   +  FNR+ +   G A SD+A+
Sbjct: 142 FGENVVPYYRGFATQRGQWTVGFNRIFQLYRGYANSDRAQ 181

[161][TOP]
>UniRef100_Q0ICS9 Possible phycobilisome linker polypeptide n=1 Tax=Synechococcus sp.
           CC9311 RepID=Q0ICS9_SYNS3
          Length = 276

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 7/162 (4%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           + A+++A +QV GNA   + +      L SQ R   +T ++ V GLAK+  YR  +    
Sbjct: 74  ETAISSAYKQVMGNANPTDSQRCKE--LESQLRDGRITTRDFVAGLAKSEFYRQNYYHKV 131

Query: 268 STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVPS 441
           S  R VE N+KHLLGR P  Q+E+SA    +   GYD  I+    + EY  +FG + VP 
Sbjct: 132 SPIRGVEHNFKHLLGRPPINQSEISACISLIADQGYDVFINRMTSSGEYLEVFGTDTVP- 190

Query: 442 TVFRGTYRSS-----EEFNRLCKSNAGPAASDKAKRGLNMLV 552
             +   ++S        F  +C  + G A+SDK   G + LV
Sbjct: 191 --YDRAWKSEAGFYCSTFVNMCSVSTGNASSDKIVGGRSQLV 230

[162][TOP]
>UniRef100_Q064L2 Putative uncharacterized protein n=1 Tax=Synechococcus sp. BL107
           RepID=Q064L2_9SYNE
          Length = 298

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 57/152 (37%), Positives = 79/152 (51%), Gaps = 7/152 (4%)
 Frame = +1

Query: 94  AVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNST 273
           A+ AA   V+GNA+L + E +    L SQ     + MK+ V+G+AK+  Y   F T  S 
Sbjct: 78  AIQAAYIHVYGNAHLMDYERS--VELESQLLNGEIAMKDFVKGIAKSEFYERNFYTNCSP 135

Query: 274 YRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPSTV 447
            R +EL++KHLLGR P  Q+E+S         G+ A ID     AEY   FG + VP   
Sbjct: 136 MRTIELDFKHLLGRVPYNQSEISELIALQAEFGHAAVIDAMVDSAEYLETFGKHTVP--- 192

Query: 448 FRGTYRSSE-----EFNRLCKSNAGPAASDKA 528
           +  +++SS       FNR    + G A SDKA
Sbjct: 193 YMRSWKSSAGAPQVTFNRTAAMSLGYAYSDKA 224

[163][TOP]
>UniRef100_Q05Z72 Possible phycobilisome linker polypeptide n=1 Tax=Synechococcus sp.
           BL107 RepID=Q05Z72_9SYNE
          Length = 300

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 60/158 (37%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + AA RQVFGN  L   E      L SQ    ++++++ V GLAK+  Y+  +    S  
Sbjct: 99  MTAAYRQVFGN--LGPTENQRCTELESQLMNGDISVRDFVAGLAKSDLYKQNYFFRVSPI 156

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPS--- 441
           R +ELNYKHLLGR P  QAEVSA    +   G+D  ++      EY  +FG + VP    
Sbjct: 157 RGIELNYKHLLGRPPLNQAEVSAAITVIAEHGFDGLVEKLTRSGEYLEVFGTDTVPYLRA 216

Query: 442 -TVFRGTYRSSEEFNRLCKSNAGPAASDKAKRGLNMLV 552
            T   G Y S+  F  L +   G AASD    G + LV
Sbjct: 217 WTSAAGAYCST--FVNLGRVTPGNAASDTTIEGRSQLV 252

[164][TOP]
>UniRef100_Q0I7X3 Phycobilisome linker polypeptide n=1 Tax=Synechococcus sp. CC9311
           RepID=Q0I7X3_SYNS3
          Length = 301

 Score = 77.0 bits (188), Expect = 9e-13
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P +S    + A++AA + V+GNA++ + E +  + L +Q +   +++++ VRGLAK+  Y
Sbjct: 71  PDISPEALEKAISAAYQHVYGNAHVMDNERS--SSLEAQLKDGRISIQDFVRGLAKSDFY 128

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSL 417
           +  F    S  R +EL++KH+LGR P  Q E++ + +   + G+ A ID+    AEY   
Sbjct: 129 KKNFYDKCSPERTIELDFKHILGRTPHDQREITKNIEIQAANGHHAVIDSMLDSAEYAET 188

Query: 418 FGDNVVP--STVFRGTYRSSEEFNRLCKSNAGPAASDKA 528
           FG + VP   +       +   FNR      G A SDKA
Sbjct: 189 FGRHTVPYMRSWLSQAGSAQSAFNRTAAICLGYAYSDKA 227

[165][TOP]
>UniRef100_Q55544 Phycobilisome LCM core-membrane linker polypeptide n=1
           Tax=Synechocystis sp. PCC 6803 RepID=Q55544_SYNY3
          Length = 896

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 2/127 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LSA + +  + AA RQ+F    + +  +  ++ L SQ R  +++MKE VR LAK+  Y
Sbjct: 271 PGLSALEKNAVIKAAYRQIFERD-ITKAYSQSISYLESQVRNGDISMKEFVRRLAKSPLY 329

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F  P    R +EL ++H+LGRGP ++ EV  +   + S G  A +D    + EY   
Sbjct: 330 RKQFFEPFINSRALELAFRHILGRGPSSREEVQKYFSIVSSGGLPALVDALVDSQEYADY 389

Query: 418 FGDNVVP 438
           FG+  VP
Sbjct: 390 FGEETVP 396

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
 Frame = +1

Query: 94   AVAAAIRQVFGN---AYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTP 264
            A+ AA RQVF      Y+   E      L S+     + +KE + GL  +  Y   F  P
Sbjct: 738  AIRAAYRQVFERDLEPYIINSE---FTALESKLSNNEINVKEFIEGLGTSELYMKEFYAP 794

Query: 265  NSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP 438
                +++E+  KH LGR P  Q E+  + Q L S G  A I     G EY   FG++ VP
Sbjct: 795  YPNTKVIEMGTKHFLGRAPLNQKEIQQYNQILASQGLKAFIGAMVNGMEYLQTFGEDTVP 854

Query: 439  ----STVFRGTYRSSEE-FNRLCKSN 501
                 T+    + ++E  +N+L K +
Sbjct: 855  YRRFPTLPAANFPNTERLYNKLTKQD 880

[166][TOP]
>UniRef100_A5GVM2 Phycobilisome linker polypeptide, C-phycoerythrin class
           II-associated n=1 Tax=Synechococcus sp. RCC307
           RepID=A5GVM2_SYNR3
          Length = 278

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 6/161 (3%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           + A+AAA +QV GN  L   E+     L SQ    ++ +++ V GLAK+  Y+  + +  
Sbjct: 74  ETAIAAAYKQVLGN--LGPTESQRCTELESQLLNGDINVRDFVAGLAKSDLYKQNYFSTV 131

Query: 268 STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP- 438
           S  R +ELN KHLLGR P  QAEVSA    +   G+DA +D      EY  +FG + VP 
Sbjct: 132 SPIRGIELNLKHLLGRPPVNQAEVSACITLIAEHGFDALVDKITQSGEYLEVFGTDTVPY 191

Query: 439 STVFR---GTYRSSEEFNRLCKSNAGPAASDKAKRGLNMLV 552
           +  F+   G Y S+  F  + +   G AASD   +  ++LV
Sbjct: 192 ARAFKSEAGFYCST--FINMGEVCTGNAASDTTVQSRSLLV 230

[167][TOP]
>UniRef100_Q3AWC0 C-phycoerythrin class II gamma chain, linker polypeptide n=1
           Tax=Synechococcus sp. CC9902 RepID=Q3AWC0_SYNS9
          Length = 294

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           +AAA RQV GN  L   E+     L ++     +T+++ + GLAK+  Y++ F       
Sbjct: 85  IAAAYRQVLGN--LHPRESQRETSLEARLLNGEITVRDFINGLAKSDFYKANFFHAVGAQ 142

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP 438
           R +ELN+KHLLGR P  Q EV  H +     G+DA ID     AEY  +FG ++VP
Sbjct: 143 RGIELNFKHLLGRSPLNQGEVQEHIKLQAEQGFDALIDKLTDSAEYTEVFGSDIVP 198

[168][TOP]
>UniRef100_Q02907 Phycobilisome 100.5 kDa core-membrane linker polypeptide n=1
           Tax=Synechocystis sp. PCC 6714 RepID=APCE_SYNY4
          Length = 896

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 45/127 (35%), Positives = 71/127 (55%), Gaps = 2/127 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LSA + +  + AA RQ+F    + +  +  ++ L SQ R  +++MKE VR LAK+  Y
Sbjct: 271 PGLSALEKNAVIKAAYRQIFERD-ITKAYSQSISYLESQVRNGDISMKEFVRRLAKSPLY 329

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F  P    R +EL ++H+LGRGP ++ EV  +   + + G  A +D    + EY   
Sbjct: 330 RKQFFEPFINSRALELAFRHILGRGPSSREEVQKYFAIVSNGGLPALVDALVDSQEYSDY 389

Query: 418 FGDNVVP 438
           FG+  VP
Sbjct: 390 FGEETVP 396

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
 Frame = +1

Query: 94   AVAAAIRQVFGN---AYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTP 264
            A+ AA RQVF      Y+   E      L S+     + +KE + GL  +  Y   F  P
Sbjct: 738  AIRAAHRQVFERDLEPYIINSE---FTALESKLSNGEINVKEFIEGLGTSELYMKEFYAP 794

Query: 265  NSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP 438
                +++E+  KH LGR P  Q E+  + Q L S G  A I     G EY   FG++ VP
Sbjct: 795  YPNTKVIEMGTKHFLGRAPLNQKEIQQYNQILASQGLKAFIGAMVNGMEYLQTFGEDTVP 854

Query: 439  ----STVFRGTYRSSEE-FNRLCKSN 501
                 T+    + ++E  +N+L K +
Sbjct: 855  YRRFPTLPAANFPNTERLYNKLTKQD 880

[169][TOP]
>UniRef100_Q3M8Y7 Phycobilisome linker polypeptide n=1 Tax=Anabaena variabilis ATCC
           29413 RepID=Q3M8Y7_ANAVT
          Length = 237

 Score = 74.7 bits (182), Expect = 4e-12
 Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
 Frame = +1

Query: 22  RPATYSSVDATIDAPRL-------SAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQ 180
           R  ++ + D   D P +       S  + +  + AA RQVF    + +        L +Q
Sbjct: 16  RVQSFGTADVNEDTPYIYRLEDANSPSEIEELIWAAYRQVFNEQEILKFNRQ--IGLETQ 73

Query: 181 FRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTL 357
            + R++T+K+ +RGLAK+  +    +TPN+ YRLVE++ K LLGR P  + E  A +  +
Sbjct: 74  LKNRSITVKDFIRGLAKSERFYQLVVTPNNNYRLVEMSLKRLLGRSPYNEEEKIAWSIQI 133

Query: 358 MSAGYDADIDTYF-GAEYDSLFGDNVVP 438
            S G+   +D      EY+  FGDN VP
Sbjct: 134 ASKGWGGFVDALIDSTEYEQAFGDNAVP 161

[170][TOP]
>UniRef100_O68973 Phycobiliprotein ApcE n=1 Tax=Synechococcus sp. PCC 7002
           RepID=O68973_SYNP2
          Length = 886

 Score = 74.7 bits (182), Expect = 4e-12
 Identities = 49/140 (35%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LSA + +  V AA RQ+F    +    +  ++ L SQ +  +++MKE VR LAK+  Y
Sbjct: 267 PGLSALEKNSVVKAAYRQIFERD-ITRAYSQSISYLESQVKSGDISMKEFVRRLAKSPLY 325

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F  P    R +EL ++H+LGRGP ++ EV  +   + S G  A +D    + EY   
Sbjct: 326 RKQFFEPFINSRALELAFRHILGRGPSSREEVQEYFAIVSSGGLAALVDALVDSQEYADY 385

Query: 418 FGDNVVPSTVFRGTYRSSEE 477
           FG+  VP    RG  + ++E
Sbjct: 386 FGEETVP--YLRGLGQEAQE 403

 Score = 67.0 bits (162), Expect = 9e-10
 Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
 Frame = +1

Query: 94   AVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNST 273
            A+AAA RQ+F          A    L S+   R + MKE + GL  +  Y+  F TP   
Sbjct: 730  AIAAAYRQIFERDIEPYIVDAQFTALESKLGNREINMKEFIEGLGCSELYQKEFYTPYPN 789

Query: 274  YRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP--- 438
             +++E+  KH LGR P  Q E+  + Q L S G  A I     + EY   FG++ VP   
Sbjct: 790  TKVIEMGTKHFLGRAPLDQQEIRKYNQILASQGLKAFIGAMVNSMEYLDNFGEDTVPFRR 849

Query: 439  -STVFRGTYRSSEE-FNRLCKSN 501
              T+    + ++E  +N+L K N
Sbjct: 850  FPTLPAANFPNTERLYNQLTKQN 872

[171][TOP]
>UniRef100_P29988 Phycobilisome rod-core linker polypeptide cpcG3 n=2 Tax=Nostoc sp.
           PCC 7120 RepID=PYG3_ANASP
          Length = 237

 Score = 74.7 bits (182), Expect = 4e-12
 Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
 Frame = +1

Query: 22  RPATYSSVDATIDAPRL-------SAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQ 180
           R  ++ + D   D P +       S  + +  + AA RQVF    + +        L +Q
Sbjct: 16  RVQSFGTADVNEDTPYIYRLENANSPSEIEELIWAAYRQVFNEQEILKFNRQ--IGLETQ 73

Query: 181 FRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTL 357
            + R++T+K+ +RGLAK+  +    +TPN+ YRLVE++ K LLGR P  + E  A +  +
Sbjct: 74  LKNRSITVKDFIRGLAKSERFYQLVVTPNNNYRLVEMSLKRLLGRSPYNEEEKIAWSIQI 133

Query: 358 MSAGYDADIDTYF-GAEYDSLFGDNVVP 438
            S G+   +D      EY+  FGDN VP
Sbjct: 134 ASKGWGGFVDALIDSTEYEQAFGDNTVP 161

[172][TOP]
>UniRef100_Q3M9V2 Phycobilisome protein n=1 Tax=Anabaena variabilis ATCC 29413
           RepID=Q3M9V2_ANAVT
          Length = 1132

 Score = 73.9 bits (180), Expect = 7e-12
 Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LSA + +  V AA RQ+F    +    +  ++ L S+ +  +++MKE VR LAK+  Y
Sbjct: 277 PGLSATEKNEVVKAAYRQIFERD-ITRAYSLSISDLESKVKNGDISMKEFVRRLAKSPLY 335

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSL 417
           + +F  P    R++EL ++H+LGRGP ++ EV  +   + + G  A +D     AEY   
Sbjct: 336 QKQFYQPFINSRVIELAFRHILGRGPSSREEVQKYFSIISNGGLPALVDALVDSAEYGDY 395

Query: 418 FGDNVVPSTVFRGTYRSSEE 477
           FG+  VP    RG  + ++E
Sbjct: 396 FGEETVP--YLRGLGQEAQE 413

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
 Frame = +1

Query: 169  LTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAH 345
            L S+ R   ++++E VR +A +  YR RF TP    +++E  ++HLLGR P TQ E+  +
Sbjct: 999  LDSKLRNGEISVREFVREIASSEIYRKRFYTPYPNTKVIEFLFRHLLGRAPATQGEIRQY 1058

Query: 346  TQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
             + L   G  A ++    + EY   FG++VVP
Sbjct: 1059 NKLLADHGLRAAVEAIVDSPEYSRYFGEDVVP 1090

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 44/145 (30%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
 Frame = +1

Query: 97   VAAAIRQVFGN---AYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
            ++AA RQ+F      Y+ + E +      S+     +T+KE + GL  +  Y   F TP 
Sbjct: 745  ISAAYRQIFERDIAPYIAQNEFSG---WESKLGNGEITVKEFIEGLGYSNLYLKEFYTPY 801

Query: 268  STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP- 438
               +++EL  KH LGR P  QAE+  + Q L + G  A I+    + EY+ +FG++ VP 
Sbjct: 802  PNTKVIELGTKHFLGRAPIDQAEIRKYNQILATQGIRAFINALVNSQEYNEVFGEDTVPY 861

Query: 439  ---STVFRGTYRSSEE-FNRLCKSN 501
                T+    + ++++ +N+L K N
Sbjct: 862  RRFPTLPAANFPNTQKLYNQLTKQN 886

[173][TOP]
>UniRef100_Q7U4Q6 C-phycoerythrin class II gamma chain, linker polypeptide n=1
           Tax=Synechococcus sp. WH 8102 RepID=Q7U4Q6_SYNPX
          Length = 293

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 5/145 (3%)
 Frame = +1

Query: 112 RQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVEL 291
           RQV+GN    E E      L ++     +T+++ V GLAK+  Y+  +    +  R +EL
Sbjct: 90  RQVYGNLPPTENERC--TSLEARLMNGEITVRDFVNGLAKSPFYKKNYFHSVAPQRGIEL 147

Query: 292 NYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPSTVFRGTYR 465
           N+KHLLGR P  QAE+ A  +     G+DA ID+   GAEY  +FG ++VP      +Y 
Sbjct: 148 NFKHLLGRAPLNQAEIQASIKLQAEHGFDALIDSLTDGAEYAEVFGSDIVPYVRTADSYA 207

Query: 466 S--SEEFNRLCK-SNAGPAASDKAK 531
              +  FN + + ++   A SD A+
Sbjct: 208 GMMTSSFNMMRELASTKVAVSDNAQ 232

[174][TOP]
>UniRef100_B7KKS7 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 7424
           RepID=B7KKS7_CYAP7
          Length = 898

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LS  + +  + AA RQ+F    +    +  ++ L SQ +  +++MKE VR LAK+  Y
Sbjct: 277 PGLSETEKNSVIKAAYRQIFERD-IIRAYSQSISYLESQVKNGDISMKEFVRRLAKSPLY 335

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F  P    R +EL ++H+LGRGP ++ EV  +   +   G  A +D    + EY   
Sbjct: 336 RKQFFEPFINSRALELAFRHILGRGPSSREEVQKYFSIVSQGGLSALVDALVDSQEYSDY 395

Query: 418 FGDNVVP 438
           FG+  VP
Sbjct: 396 FGEETVP 402

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 10/145 (6%)
 Frame = +1

Query: 97   VAAAIRQVFG---NAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
            V AA RQ+F    + Y+ +   A+   L S+     +T+KE + GL  +  Y   F  P 
Sbjct: 741  VKAAYRQIFERDLDPYIIQ---AEFTALESKLSNAEITVKEFIEGLGCSDLYVKEFYAPY 797

Query: 268  STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP- 438
               +++EL  KH LGR P  Q E+  + Q L + G  A I       EY  +FG++ VP 
Sbjct: 798  PNTKVIELGTKHFLGRAPLNQKEIQKYNQILATQGIRAFIGAMVNCMEYLQVFGEDTVPY 857

Query: 439  ---STVFRGTYRSSEE-FNRLCKSN 501
                T+    + ++E  +N+L K +
Sbjct: 858  RRFPTLPAANFPNTERLYNKLTKQD 882

[175][TOP]
>UniRef100_P16566 Phycobilisome 120 kDa linker polypeptide, core n=1 Tax=Fremyella
           diplosiphon RepID=APCE_FREDI
          Length = 1080

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 46/140 (32%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LSA + +  + AA RQ+F    +    +  V+ L S+ +  +++MKE VR LAK+  Y
Sbjct: 276 PGLSASEKNEVIRAAYRQIFERD-ITRAYSLSVSDLESKVKNGDISMKEFVRRLAKSPLY 334

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + +F  P    R++EL ++H+LGRGP ++ EV  +   + + G  A +D    + EY   
Sbjct: 335 QKQFYQPFINSRVIELAFRHILGRGPSSREEVQKYFSIISNGGLPALVDALVDSPEYSDY 394

Query: 418 FGDNVVPSTVFRGTYRSSEE 477
           FG+  VP    RG  + ++E
Sbjct: 395 FGEETVP--YLRGLGQEAQE 412

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 7/142 (4%)
 Frame = +1

Query: 97   VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
            ++AA RQ+F           + + L S+     +T+KE + GL  +  Y   F TP    
Sbjct: 746  ISAAYRQIFERDVAPYIAKNEFSALESKLSNGEITVKEFIEGLGYSNLYIKEFYTPYPNT 805

Query: 277  RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP---- 438
            +++EL  KH LGR P  Q E+  + Q L + G  A I      AEY  +FG++ VP    
Sbjct: 806  KVIELGTKHFLGRAPLDQVEIRKYNQILATQGIRAFIGALVSSAEYAEVFGEDTVPYRRY 865

Query: 439  STVFRGTYRSSEE-FNRLCKSN 501
             T+    + ++E+ +N+L K N
Sbjct: 866  PTLPAANFPNTEKLYNQLTKQN 887

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
 Frame = +1

Query: 169  LTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAH 345
            L  + +   ++++E VR LA +  Y  RF TP  + +++E  Y+HLLGR P TQ E+S +
Sbjct: 980  LEGKLQTGEISVREFVRELASSDIYCDRFYTPYPSAKVIEFLYRHLLGRAPATQEEISEY 1039

Query: 346  TQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
             + + S G  A ++    + EY   FG++VVP
Sbjct: 1040 NKLMASRGLRAVVEAIVDSQEYARYFGEDVVP 1071

[176][TOP]
>UniRef100_Q7NL81 Phycobilisome core-membrane linker protein n=1 Tax=Gloeobacter
            violaceus RepID=Q7NL81_GLOVI
          Length = 1155

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 6/147 (4%)
 Frame = +1

Query: 61   APRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAA 240
            AP  +  + DVA+ A  RQV             ++   S+ +   ++++E VR L ++  
Sbjct: 985  APDATRSEKDVAINAIYRQVLDVFAGIPPSYLRLSEAESKLKNNEISVREFVRRLGRSEN 1044

Query: 241  YRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDS 414
            YR RF  P S+ ++VEL  KH LGR P +Q E+S + Q L + G  A +D      EY +
Sbjct: 1045 YRKRFFEPYSSPKVVELLTKHFLGRAPISQQEISTYVQILGTKGLAAAVDAIVESPEYLT 1104

Query: 415  LFGDNVVP----STVFRGTYRSSEEFN 483
            +F +++VP     T+  G YR+S   N
Sbjct: 1105 IFNEDIVPYRRYPTLPAGNYRASVRVN 1131

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 13/136 (9%)
 Frame = +1

Query: 70  LSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRS 249
           LS+ + +  V AA RQVF      +     V+   S+ +   ++++E VR L K+  YR 
Sbjct: 288 LSSDEKERVVRAAYRQVFERD--LKAYGQSVSEAESKVKNGEISVREFVRRLGKSELYRR 345

Query: 250 RFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAH-----------TQTLMSAGYDADIDTY 393
            F  P    R++EL +KH LGR P ++AEV  +             ++ S G  A ID  
Sbjct: 346 EFYQPFINSRVLELAFKHFLGRAPESRAEVQKYFSIISSPIVRGQSSMPSGGLYALIDAL 405

Query: 394 FGA-EYDSLFGDNVVP 438
             + EY S+FG++ VP
Sbjct: 406 IDSEEYTSIFGEDTVP 421

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 51/148 (34%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
 Frame = +1

Query: 88   DVAVAAAIRQVFGN---AYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFM 258
            D  V AA  QVF     +Y+  E +A    L S+ R R  ++KE VR L  +A YR +F 
Sbjct: 765  DALVTAAYVQVFDKDIASYIRSEFSA----LESRLRNRETSVKEFVRLLGFSALYRKQFH 820

Query: 259  TPNSTYRLVELNYKHLLGRG-PTQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNV 432
                  ++VE  +KH LGR    QAE+  +   L   G  A I     G EY  L+G++ 
Sbjct: 821  DRYPNTKVVEFAFKHFLGRAVKNQAELIKYHGLLGRKGIKALIGALVDGEEYGRLYGEDT 880

Query: 433  VPS----TVFRGTYRSSEE-FNRLCKSN 501
            VPS    T+    Y +S E +NR  + +
Sbjct: 881  VPSWQFPTLPAANYPNSVELYNRFTRQD 908

[177][TOP]
>UniRef100_Q05Q37 Possible phycobilisome linker polypeptide n=1 Tax=Synechococcus sp.
           RS9916 RepID=Q05Q37_9SYNE
          Length = 300

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 63/186 (33%), Positives = 90/186 (48%), Gaps = 10/186 (5%)
 Frame = +1

Query: 25  PATYSSVDATIDAPRLSAWDGDV---AVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRN 195
           P  +S    +  A + +A   D     ++A  +QV GN  L    +     L S+    +
Sbjct: 72  PRVHSECPFSTVAEQFAATGSDALSATISATYKQVLGN--LGPTSSQRCTELESRLCNGD 129

Query: 196 LTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGY 372
           +T+++ V GLAK+  Y+  +    S  R VEL YKHLLGR P  QAEVS+    +   G+
Sbjct: 130 ITVRDFVAGLAKSDLYKQNYFFKVSPIRGVELTYKHLLGRPPINQAEVSSAISLIAEQGF 189

Query: 373 DADID--TYFGAEYDSLFGDNVVPS----TVFRGTYRSSEEFNRLCKSNAGPAASDKAKR 534
           DA I+  T+ G EY  +FG   VP     T   G Y S+  F  L + +   AASD    
Sbjct: 190 DAFIEHITHSG-EYLEVFGTQTVPYPRAWTSEAGKYCST--FVNLARISPANAASDVIIE 246

Query: 535 GLNMLV 552
           G + LV
Sbjct: 247 GRSQLV 252

[178][TOP]
>UniRef100_P80559 Phycobilisome linker polypeptide n=1 Tax=Nostoc sp. PCC 7120
           RepID=APCE_ANASP
          Length = 1132

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
 Frame = +1

Query: 70  LSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRS 249
           LSA + +  + AA RQ+F    +    +  ++ L S+ +  +++MKE VR LAK+  Y+ 
Sbjct: 279 LSATEKNEVIKAAYRQIFERD-ITRAYSLSISDLESKVKNGDISMKEFVRRLAKSPLYQK 337

Query: 250 RFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFG 423
           +F  P    R++EL ++H+LGRGP ++ EV  +   + + G  A +D     AEY   FG
Sbjct: 338 QFYQPFINSRVIELAFRHILGRGPSSREEVQKYFSIISNGGLPALVDALVDSAEYSDYFG 397

Query: 424 DNVVPSTVFRGTYRSSEE 477
           +  VP    RG  + ++E
Sbjct: 398 EETVP--YLRGLGQEAQE 413

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
 Frame = +1

Query: 169  LTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAH 345
            L S+ R   ++++E VR +A +  YR RF TP    +++E  ++HLLGR P TQ E+  +
Sbjct: 999  LDSKLRNGEISVREFVREIASSEIYRKRFYTPYPNTKVIEFLFRHLLGRAPATQGEIRQY 1058

Query: 346  TQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
             + L   G  A ++    + EY   FG++VVP
Sbjct: 1059 NKLLADNGLRAAVEAIVDSPEYSRYFGEDVVP 1090

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 16/149 (10%)
 Frame = +1

Query: 103  AAIRQVFGNAY--LFEEEAADVAVLTSQFRG-------RNLTMKELVRGLAKTAAYRSRF 255
            AAI+ +   AY  +FE + A   +  ++F G         +T+KE + GL  +  Y   F
Sbjct: 739  AAIKTLISAAYRQIFERDIAPY-IAQNEFSGWESKLGNGEITVKEFIEGLGYSNLYLKEF 797

Query: 256  MTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDN 429
             TP    +++EL  KH LGR P  QAE+  + Q L + G  A I+    + EY+ +FG++
Sbjct: 798  YTPYPNTKVIELGTKHFLGRAPIDQAEIRKYNQILATQGIRAFINALVNSQEYNEVFGED 857

Query: 430  VVP----STVFRGTYRSSEE-FNRLCKSN 501
             VP     T+    + ++++ +N+L K N
Sbjct: 858  TVPYRRFPTLPAANFPNTQKLYNQLTKQN 886

[179][TOP]
>UniRef100_Q2JMV9 Phycobilisome rod-core linker polypeptide cpcG1 n=1
           Tax=Synechococcus sp. JA-2-3B'a(2-13) RepID=Q2JMV9_SYNJB
          Length = 241

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           D  + AA RQ+F    + E        L SQ R   +++KE VRGL K+  YR   M PN
Sbjct: 40  DNIIRAAYRQIFSEHLMLESYRQKA--LESQLRNGAISVKEFVRGLGKSEVYRDLVMVPN 97

Query: 268 STYRLVELNYKHLLGRGPT--QAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
             YR +E+ ++  LGR PT  Q E   ++  + + G D  ID    + EY++ FGD+VVP
Sbjct: 98  DNYRFIEVTFQRFLGR-PTYSQQERIKYSIIVATKGLDGFIDAVVDSEEYNAAFGDDVVP 156

[180][TOP]
>UniRef100_B7JZ26 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 8801
           RepID=B7JZ26_CYAP8
          Length = 903

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 6/159 (3%)
 Frame = +1

Query: 19  ARPATYSSVDAT----IDAPRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFR 186
           A P +Y +   T    +  P LS  +    V AA RQ+F    +       ++ L SQ R
Sbjct: 263 ALPQSYYNAAQTRQKFVMKPGLSESEKSAVVKAAYRQLFERD-ITRAYGQSISYLESQVR 321

Query: 187 GRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMS 363
             +++MKE VR L K+  YR +F  P    R +EL ++H+LGRGP ++ EV  +   + S
Sbjct: 322 NGDISMKEFVRRLCKSPLYRKQFFEPFINSRALELAFRHILGRGPSSREEVQTYFSIVSS 381

Query: 364 AGYDADIDTYFGA-EYDSLFGDNVVPSTVFRGTYRSSEE 477
            G    +D    + EY   FG+  VP    RG  + ++E
Sbjct: 382 GGLAGLVDALVDSQEYSDYFGEETVP--YLRGLGQEAQE 418

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
 Frame = +1

Query: 97   VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
            + AA RQ+F          A+   L S+     +++KE +  L  +  Y   F  P    
Sbjct: 746  IRAAYRQIFERDLEPYIVQAEFTALESKLSNEEISVKEFIEQLGCSDLYIKEFYAPYPNT 805

Query: 277  RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP---- 438
            +++EL  KH LGR P TQ E+  + Q L + G  A I     + EY  LFG++ VP    
Sbjct: 806  KVIELGTKHFLGRAPLTQKEIQKYNQILATQGIRAFIGAMVDSMEYLQLFGEDTVPYRRF 865

Query: 439  STVFRGTYRSSEE-FNRLCKSN 501
             T+    + ++E  +N+L K +
Sbjct: 866  PTLPAANFPNTERLYNKLTKQD 887

[181][TOP]
>UniRef100_Q05Q51 C-phycoerythrin class II gamma chain, linker polypeptide n=1
           Tax=Synechococcus sp. RS9916 RepID=Q05Q51_9SYNE
          Length = 293

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + AA RQV GN    + +      L  +     +T+++ V GLAK+  Y++ F       
Sbjct: 85  IVAAYRQVLGNLPPTDNQRE--TSLEVRLMNGEITVRDFVNGLAKSDFYKANFFHAVGAQ 142

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP 438
           R +ELNYKH+LGR P  QAEV A  +     G+DA ID+    AEY  +FG ++VP
Sbjct: 143 RGIELNYKHVLGRAPLNQAEVQASIKLQAEEGFDALIDSLTDSAEYTEVFGSDIVP 198

[182][TOP]
>UniRef100_C7QXN2 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 8802
           RepID=C7QXN2_CYAP0
          Length = 903

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 6/159 (3%)
 Frame = +1

Query: 19  ARPATYSSVDAT----IDAPRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFR 186
           A P +Y +   T    +  P LS  +    V AA RQ+F    +       ++ L SQ R
Sbjct: 263 ALPQSYYNAAQTRQKFVMKPGLSESEKSAVVKAAYRQLFERD-ITRAYGQSISYLESQVR 321

Query: 187 GRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMS 363
             +++MKE VR L K+  YR +F  P    R +EL ++H+LGRGP ++ EV  +   + S
Sbjct: 322 NGDISMKEFVRRLCKSPLYRKQFFEPFINSRALELAFRHILGRGPSSREEVQTYFSIVSS 381

Query: 364 AGYDADIDTYFGA-EYDSLFGDNVVPSTVFRGTYRSSEE 477
            G    +D    + EY   FG+  VP    RG  + ++E
Sbjct: 382 GGLAGLVDALVDSQEYSDYFGEETVP--YLRGLGQEAQE 418

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
 Frame = +1

Query: 97   VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
            + AA RQ+F          A+   L S+     +++KE +  L  +  Y   F  P    
Sbjct: 746  IRAAYRQIFERDLEPYIVQAEFTALESKLSNEEISVKEFIEQLGCSDLYIKEFYAPYPNT 805

Query: 277  RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP---- 438
            +++EL  KH LGR P TQ E+  + Q L + G  A I     + EY  LFG++ VP    
Sbjct: 806  KVIELGTKHFLGRAPLTQKEIQKYNQILATQGIRAFIGAMVDSMEYLQLFGEDTVPYRRF 865

Query: 439  STVFRGTYRSSEE-FNRLCKSN 501
             T+    + ++E  +N+L K +
Sbjct: 866  PTLPAANFPNTERLYNKLTKQD 887

[183][TOP]
>UniRef100_B9YFD1 Phycobilisome linker polypeptide n=1 Tax='Nostoc azollae' 0708
           RepID=B9YFD1_ANAAZ
          Length = 1130

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 47/140 (33%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LSA +    V AA RQVF    +    +  ++ L S+ +   ++MKE +R LAK++ Y
Sbjct: 275 PGLSATEKIEVVKAAYRQVFERD-ITRAYSLSISDLESKVKSGCISMKEFIRRLAKSSLY 333

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + +F  P    R++EL ++H+LGRGP ++ EV  +   +   G  A +DT   + EY   
Sbjct: 334 QKQFYQPFINSRVIELAFRHILGRGPSSREEVQNYFSIISKGGLPALVDTLVDSNEYSDY 393

Query: 418 FGDNVVPSTVFRGTYRSSEE 477
           FG+  VP    RG  + ++E
Sbjct: 394 FGEETVP--YLRGLGQEAQE 411

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 10/121 (8%)
 Frame = +1

Query: 106  AIRQVFGNAY--LFEEEAA------DVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMT 261
            A++ + G+AY  +FE + A      +  VL +Q    ++++KE V+ L  ++ Y   F T
Sbjct: 738  AVQTLIGSAYRQIFERDIAPYILKNEFTVLETQLGNGDISVKEFVQALGYSSLYLKEFYT 797

Query: 262  PNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVV 435
            P    +++EL  KH LGR P  QAE+  + Q L + G  A I T    AEY   FG++ V
Sbjct: 798  PYPNTKVIELGTKHFLGRAPIDQAEIRKYNQILATQGIKAFIGTMVNSAEYAQAFGEDTV 857

Query: 436  P 438
            P
Sbjct: 858  P 858

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
 Frame = +1

Query: 169  LTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAH 345
            L S+ R   +T+++ V  LA +  YR RF TP    +++E  ++H+ GR P TQ E+  +
Sbjct: 997  LDSKLRNGEITVRQFVLELASSEIYRKRFYTPYPNTKVIEFLFRHIFGRAPATQGEIRQY 1056

Query: 346  TQTLMSAGYDADIDTYFGA-EYDSLFGDNVVPSTVF 450
             + L   G  A ++    + EY   FG++VVP   F
Sbjct: 1057 NKILADRGLRAAVEGIVNSPEYARYFGEDVVPYNRF 1092

[184][TOP]
>UniRef100_Q0ICU3 Phycoerythrin class II gamma chain, linker polypeptide n=1
           Tax=Synechococcus sp. CC9311 RepID=Q0ICU3_SYNS3
          Length = 242

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + AA RQV GN    + +      L  +     +T+++ V GLAK+  Y+  F       
Sbjct: 34  IVAAYRQVLGNLPPTDNQRE--TSLEVRLMNGEITVRDFVNGLAKSDFYKDNFFHAVGAQ 91

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPSTVF 450
           R +ELN+KHLLGR P  Q EV  H +     G+DA IDT    AEY  +FG ++VP    
Sbjct: 92  RGIELNFKHLLGRAPLNQQEVQNHIKLQAEEGFDALIDTLTDSAEYTEVFGADIVPYDRT 151

Query: 451 RGTY 462
           + +Y
Sbjct: 152 KDSY 155

[185][TOP]
>UniRef100_B8HQ45 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 7425
           RepID=B8HQ45_CYAP4
          Length = 1100

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LSA + + AV AA RQVF    +    +  ++ L S+ +  +++MKE +R L K+  Y
Sbjct: 278 PGLSASEKNAAVKAAYRQVFERD-ITRAYSLGISDLESKVKNGDISMKEFIRRLGKSPLY 336

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R  F  P    R +EL ++H LGRGP ++ EV  +   +   G  A +D    + EY   
Sbjct: 337 RKNFFEPYINSRALELAFRHFLGRGPSSREEVQEYFAIVSKGGLPALVDALVDSKEYSDY 396

Query: 418 FGDNVVPSTVFRGTYRSSEE 477
           FG+  VP    RG  + ++E
Sbjct: 397 FGEETVP--YLRGLGQEAQE 414

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
 Frame = +1

Query: 97   VAAAIRQVFGN---AYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
            + AA RQ+F      Y+ + E     VL +Q    ++T+KE +  L  +  Y   F  P 
Sbjct: 758  IQAAYRQIFERDIAPYIIKNE---FTVLETQLSNGDITVKEFIEALGCSQLYIREFYAPF 814

Query: 268  STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP- 438
               +++EL  KH LGR P  QAE+  + Q L + G    I     G EY  LF ++VVP 
Sbjct: 815  PNTKVIELGTKHFLGRAPLDQAEIRKYNQILATQGIKGFIKAMVNGTEYIQLFNEDVVPY 874

Query: 439  ---STVFRGTYRSSEE-FNRLCKSN 501
                T+    + ++E+ +N+L K +
Sbjct: 875  RRFPTLPAANFPNTEKLYNQLTKQD 899

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 7/153 (4%)
 Frame = +1

Query: 1    PAPFPCARPATYSSVDATIDAP-RLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAV--- 168
            PA     R ++ S+V      P R+     +  VA  I+ ++       EE+   A    
Sbjct: 935  PAYVELGRSSSNSAVVEAQPRPTRIYRLGAEADVATVIQAIYVQVMDLSEESVPDAFRRY 994

Query: 169  -LTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGPTQAEVSAH 345
             L +Q +   +++++ V+ LA + AYR RF      +++VE   +HLLGR       S H
Sbjct: 995  DLEAQLQRGEISVRQFVQQLASSTAYRDRFCVAYPGHKVVEFLCRHLLGRSVQDLSESLH 1054

Query: 346  -TQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
              Q +   G DA +     + EY   FG++VVP
Sbjct: 1055 YNQVIQERGLDAAVAAMVSSQEYTRYFGEDVVP 1087

[186][TOP]
>UniRef100_B4B4M6 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 7822
           RepID=B4B4M6_9CHRO
          Length = 898

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LS  +    + AA RQ+F    +    +  ++ L SQ R  +++MKE VR LAK+  Y
Sbjct: 278 PGLSESEKGAVIKAAYRQIFERD-ITRAYSQSISYLESQVRNGDISMKEFVRRLAKSPLY 336

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGPTQAEVSAHTQTLMSAG-----YDADIDTYFGAEY 408
           R +F  P    R +EL ++H+LGRGP+  E   +  +++S G      DA +D+    EY
Sbjct: 337 RQQFFEPFINSRALELAFRHILGRGPSSREEVQNYFSIVSTGGLAALVDALVDS---QEY 393

Query: 409 DSLFGDNVVP 438
              FG+  VP
Sbjct: 394 ADYFGEETVP 403

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 10/145 (6%)
 Frame = +1

Query: 97   VAAAIRQVFG---NAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
            ++AA RQ+F    + Y+ +   A+   L S+     +T+KE + GL ++  Y   F  P 
Sbjct: 741  ISAAYRQIFERDLDPYIVQ---AEFTALESKLSNAEITVKEFIEGLGRSDLYIKEFYAPY 797

Query: 268  STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP- 438
               +++EL  KH LGR P  Q E+  + Q L S G  A I     + EY  +FG++ VP 
Sbjct: 798  PNTKVIELGTKHFLGRAPLNQKEIQKYNQILASEGIRAFIGAMVNSMEYLQVFGEDTVPY 857

Query: 439  ---STVFRGTYRSSEE-FNRLCKSN 501
                T+    + ++E+ +N+L K +
Sbjct: 858  RRFPTLPAANFPNTEKLYNKLTKQD 882

[187][TOP]
>UniRef100_Q02181 Phycoerythrin class 2 subunit gamma, linker polypeptide n=1
           Tax=Synechococcus sp. WH 8020 RepID=PHEG_SYNPY
          Length = 293

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + AA RQV GN    + +      L  +     +T+++ V GLAK+  Y+  F       
Sbjct: 85  IVAAYRQVLGNLPPTDNQRE--TSLEVRLMNGEITVRDFVNGLAKSDFYKDNFFHAVGAQ 142

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPSTVF 450
           R +ELN+KHLLGR P  Q EV  H +     G+DA IDT    AEY  +FG ++VP    
Sbjct: 143 RGIELNFKHLLGRAPLNQQEVQNHIKLQAEEGFDALIDTLTDSAEYTEVFGADIVPYDRT 202

Query: 451 RGTY 462
           + +Y
Sbjct: 203 KDSY 206

[188][TOP]
>UniRef100_P51263 Phycobilisome linker polypeptide n=1 Tax=Porphyra purpurea
            RepID=APCE_PORPU
          Length = 886

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 50/146 (34%), Positives = 76/146 (52%), Gaps = 10/146 (6%)
 Frame = +1

Query: 94   AVAAAIRQVFG---NAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTP 264
            A+ AA RQ+F    N++    E  D+    S F  + + +KEL++ LA +  Y   F  P
Sbjct: 729  ALRAAYRQIFERDLNSFSIGGEFLDIE---SSFLNKQINVKELIQKLALSELYGKEFYQP 785

Query: 265  NSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP 438
                +++EL  KH+LGR P  QAE+    Q L S G    ++T    +EYDS++G N VP
Sbjct: 786  YPNTKVIELGTKHILGRAPNNQAEIRFLNQILASKGLSTFVETLVNSSEYDSVYGTNTVP 845

Query: 439  ----STVFRGTYRSSEE-FNRLCKSN 501
                 T+    + ++E  +NRL K N
Sbjct: 846  YRRFPTLPAANFPNTETLYNRLTKQN 871

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
 Frame = +1

Query: 25  PATYSSVDATIDAPR------LSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFR 186
           P TYS   A +  PR      LSA + +  V A  RQ+F    + +     ++ L SQ +
Sbjct: 251 PQTYSQ--AGVSTPRFVMKSSLSADEKNTVVKACYRQIFERD-IAKTYDLSLSNLESQVK 307

Query: 187 GRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGPTQAEVSAHTQTLMSA 366
              +++KE +R L  +  YR +F  P    R +EL ++H LGRGP+  E       ++SA
Sbjct: 308 NGQISIKEFIRSLGTSNIYRKQFYEPFVNSRALELAFRHFLGRGPSSLEEFQKYFAILSA 367

Query: 367 -GYDADIDTYF-GAEYDSLFGDNVVP 438
            G    ++     AEY   FG+  VP
Sbjct: 368 TGLSGLVNAILNSAEYADYFGEETVP 393

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           DV    +  +VFG   +++EE   +  + SQ +   ++++E +R LAK++ +RS +  P 
Sbjct: 530 DVIAKVSYLRVFGRE-VYQEEKLLLRPIESQLQDGQISVREFIRQLAKSSIFRSLYWEPL 588

Query: 268 STYRLVELNYKHLLGRGPT--QAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
              + +E  +  LLGR PT  + E++ +       GY   +D    + EY   FG+NVVP
Sbjct: 589 YICKAIEYIHNRLLGR-PTYGRQEINKYFDIAYKEGYYQVVDAIIDSPEYIETFGENVVP 647

[189][TOP]
>UniRef100_Q8DGF2 Phycobilisome core-membrane linker polypeptide n=1
           Tax=Thermosynechococcus elongatus BP-1
           RepID=Q8DGF2_THEEB
          Length = 1139

 Score = 70.9 bits (172), Expect = 6e-11
 Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LSA + +  V AA RQ+F    +       ++ L S+ +  +++MKE +R LAK+  Y
Sbjct: 279 PGLSAAEKNEVVKAAYRQIFERD-ISRAYGLGISDLESKVKNGSISMKEFIRQLAKSPLY 337

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R  F  P    R +EL ++H+LGRGP ++ EV  +   +   G  A +D    + EY   
Sbjct: 338 RKNFYEPYINSRALELAFRHILGRGPSSREEVQTYFAIISKGGLPALVDALVDSKEYSDY 397

Query: 418 FGDNVVPSTVFRGTYRSSEE 477
           FG+  VP    RG  + ++E
Sbjct: 398 FGEETVP--YLRGLGQEAQE 415

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
 Frame = +1

Query: 169  LTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAH 345
            L S+ R   +T++E VR LA +  YR+RF TP    +++E  ++HLLGR P TQAE+  +
Sbjct: 1005 LESRLRNGEITVREFVRTLASSEIYRNRFYTPYPNTKVIEFLFRHLLGRAPATQAEIRQY 1064

Query: 346  TQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
             + L   G    ++T   + EY   FG++VVP
Sbjct: 1065 NKILADQGLKTAVETMVNSPEYSRYFGEDVVP 1096

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
 Frame = +1

Query: 91   VAVAAAIRQVFGN---AYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMT 261
            + + AA RQVF      Y+  +E      L S+     +T+KE +  L  +  Y+  F T
Sbjct: 749  LVIQAAYRQVFERDVAPYIVRDE---FTALESKLSNGEITLKEFIEALGCSELYQKEFYT 805

Query: 262  PNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVV 435
            P    +++EL  KH LGR P  QAE+  + Q L + G  A +      AEY   FG++ V
Sbjct: 806  PYPNTKVIELGTKHFLGRAPLDQAEIRRYNQILATQGLKAFVQALVSSAEYAQAFGEDTV 865

Query: 436  P 438
            P
Sbjct: 866  P 866

[190][TOP]
>UniRef100_Q3M8Y8 Phycobilisome linker polypeptide n=1 Tax=Anabaena variabilis ATCC
           29413 RepID=Q3M8Y8_ANAVT
          Length = 247

 Score = 70.9 bits (172), Expect = 6e-11
 Identities = 48/136 (35%), Positives = 76/136 (55%), Gaps = 9/136 (6%)
 Frame = +1

Query: 58  DAPRL-----SAWDGDVA--VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELV 216
           D PR+     +A+D ++   + A  RQVF    + +        L SQ + R +++++ V
Sbjct: 26  DTPRIYRIEDAAYDSELKEIIWATYRQVFSEHVILKFFRQ--GNLESQLKNRAISVRDFV 83

Query: 217 RGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTY 393
           RGLAK+ A+++  +  NS YRLVEL  K LLGR P  + E  A +  + + G+D  +D  
Sbjct: 84  RGLAKSEAFKTLVIKSNSNYRLVELALKRLLGRAPYNKDEEIAWSIKIATNGWDGFVDAL 143

Query: 394 FGA-EYDSLFGDNVVP 438
             + EY S FG+N+VP
Sbjct: 144 LDSEEYQSNFGENIVP 159

[191][TOP]
>UniRef100_Q54073 Anchor protein, LCM n=1 Tax=Synechococcus elongatus
           RepID=Q54073_SYNEL
          Length = 1139

 Score = 70.9 bits (172), Expect = 6e-11
 Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LSA + +  V AA RQ+F    +       ++ L S+ +  +++MKE +R LAK+  Y
Sbjct: 279 PGLSAAEKNEVVKAAYRQIFERD-ISRAYGLGISDLESKVKNGSISMKEFIRQLAKSPLY 337

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R  F  P    R +EL ++H+LGRGP ++ EV  +   +   G  A +D    + EY   
Sbjct: 338 RKNFYEPYINSRALELAFRHILGRGPSSREEVQTYFAIISKGGLPALVDALVDSKEYSDY 397

Query: 418 FGDNVVPSTVFRGTYRSSEE 477
           FG+  VP    RG  + ++E
Sbjct: 398 FGEETVP--YLRGLGQEAQE 415

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
 Frame = +1

Query: 169  LTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAH 345
            L S+ R   +T++E VR LA +  Y +RF TP    +++E  ++HLLGR P TQAE+  +
Sbjct: 1005 LESRLRNGEITVREFVRTLASSEIYCNRFYTPYPNTKVIEFLFRHLLGRAPATQAEIRQY 1064

Query: 346  TQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
             + L   G    ++T   + EY   FG++VVP
Sbjct: 1065 NKILADQGLKTAVETMVNSPEYSRYFGEDVVP 1096

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
 Frame = +1

Query: 91   VAVAAAIRQVFGN---AYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMT 261
            + + AA RQVF      Y+  +E      L S+     +T+KE +  L  +  Y+  F T
Sbjct: 749  LVIQAAYRQVFERDVAPYIVRDE---FTALESKLSNGEITLKEFIEALGCSELYQKEFYT 805

Query: 262  PNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVV 435
            P    +++EL  KH LGR P  QAE+  + Q L + G  A +      AEY   FG++ V
Sbjct: 806  PYPNTKVIELGTKHFLGRAPLDQAEIRRYNQILATQGLKAFVQALVSSAEYAQAFGEDTV 865

Query: 436  P 438
            P
Sbjct: 866  P 866

[192][TOP]
>UniRef100_P29987 Phycobilisome rod-core linker polypeptide cpcG2 n=2 Tax=Nostoc sp.
           PCC 7120 RepID=PYG2_ANASP
          Length = 247

 Score = 70.9 bits (172), Expect = 6e-11
 Identities = 48/136 (35%), Positives = 76/136 (55%), Gaps = 9/136 (6%)
 Frame = +1

Query: 58  DAPRL-----SAWDGDVA--VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELV 216
           D PR+     +A+D ++   + A  RQVF    + +        L SQ + R +++++ V
Sbjct: 26  DTPRIYRIEDAAYDSELKELIWATYRQVFSEHVILKFFRQ--GNLESQLKNRAISVRDFV 83

Query: 217 RGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTY 393
           RGLAK+ A+++  +  NS YRLVEL  K LLGR P  + E  A +  + + G+D  +D  
Sbjct: 84  RGLAKSEAFKTLVIKSNSNYRLVELALKRLLGRAPYNKDEEIAWSIKIATNGWDGFVDAL 143

Query: 394 FGA-EYDSLFGDNVVP 438
             + EY S FG+N+VP
Sbjct: 144 LDSEEYQSNFGENIVP 159

[193][TOP]
>UniRef100_Q2JXP0 Phycobilisome rod-core linker polypeptide cpcG1 n=1
           Tax=Synechococcus sp. JA-3-3Ab RepID=Q2JXP0_SYNJA
          Length = 241

 Score = 70.5 bits (171), Expect = 8e-11
 Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + AA RQ+F    + E        L SQ R   +++KE +RGL K+  YR   M PN  Y
Sbjct: 43  IRAAYRQIFSEHLMLESYRQKA--LESQLRNGAISVKEFIRGLGKSEVYRDLVMVPNDNY 100

Query: 277 RLVELNYKHLLGRGPT--QAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
           R VE+ ++  LGR PT  Q E   ++  L + G +  ID    + EY++ FGD+VVP
Sbjct: 101 RFVEITFQRFLGR-PTYSQQERIKYSIILATRGLNGFIDAVVDSEEYNAAFGDDVVP 156

[194][TOP]
>UniRef100_D0CKC4 C-phycoerythrin class II gamma chain, linker polypeptide n=1
           Tax=Synechococcus sp. WH 8109 RepID=D0CKC4_9SYNE
          Length = 279

 Score = 70.5 bits (171), Expect = 8e-11
 Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           + +A RQV+GN    E E      L ++     +T+++ V GLAK+  Y+  +    +  
Sbjct: 75  IISAYRQVYGNLPPTENERC--TSLEARLMNGEITVRDFVNGLAKSPFYKENYFHSVAPQ 132

Query: 277 RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFG-AEYDSLFGDNVVP 438
           R +ELN+KHLLGR P TQ EV    +     G+DA ID+    AEY  +FG ++VP
Sbjct: 133 RGIELNFKHLLGRAPLTQEEVQNSIKLQAEEGFDALIDSLTDCAEYAEVFGSDIVP 188

[195][TOP]
>UniRef100_A0YPV2 Phycobilisome core-membrane linker protein n=1 Tax=Lyngbya sp. PCC
            8106 RepID=A0YPV2_9CYAN
          Length = 921

 Score = 70.5 bits (171), Expect = 8e-11
 Identities = 49/147 (33%), Positives = 74/147 (50%), Gaps = 10/147 (6%)
 Frame = +1

Query: 91   VAVAAAIRQVFG---NAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMT 261
            + + AA RQVF    + Y+ + E      L S+   R +T+KE +  L  T+ Y   F T
Sbjct: 761  ILIQAAYRQVFERDIDPYVVKNE---FTALESKLGNREITVKEFIESLGNTSLYIREFYT 817

Query: 262  PNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVV 435
            P    +++EL  KH LGR P  QAE+  + Q L S G  A I     + EY  +FG++ V
Sbjct: 818  PYPNTKVIELGTKHFLGRAPQNQAEIRKYNQILASQGLKAFIGAMVNSMEYSQVFGEDTV 877

Query: 436  P----STVFRGTYRSSEE-FNRLCKSN 501
            P     T+    + ++E  +N+L K N
Sbjct: 878  PYRRFPTLPAANFPNTERLYNQLTKQN 904

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LS  +    + AA RQVF    +    +  ++ L S+ +   ++MKE +R L K+  Y
Sbjct: 288 PGLSTSERQDIIKAAYRQVFERD-ITRAYSQSISDLESKVKNGEISMKEFIRRLGKSPLY 346

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGPTQAEVSAHTQTLMSAG-----YDADIDTYFGAEY 408
           R +F  P    R+VEL  +H LGRG +  E  +    ++S+G      DA +D+    EY
Sbjct: 347 RKQFYEPFVNSRVVELAARHFLGRGLSSPEEFSKYFAIISSGGLAKLVDAMVDS---TEY 403

Query: 409 DSLFGDNVVPSTVFRGTYRSSEE 477
              FG+  VP    RG  + ++E
Sbjct: 404 SDYFGEETVP--YLRGLGQEAQE 424

[196][TOP]
>UniRef100_Q4BXP9 Phycobilisome linker polypeptide:Phycobilisome protein n=1
           Tax=Crocosphaera watsonii WH 8501 RepID=Q4BXP9_CROWT
          Length = 897

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LS  +    V AA RQ+F    + +  +  V+ L SQ R  +++MKE VR L K+  Y
Sbjct: 276 PGLSESEKGEIVRAAYRQLFERD-ITKAYSQSVSYLESQVRNGDISMKEFVRRLCKSPLY 334

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F  P    R +EL ++H+LGRGP ++ EV  +   +   G  A +D    + EY   
Sbjct: 335 RKQFFEPFINSRALELAFRHILGRGPSSREEVQNYFSIVSDGGLPALVDALVDSQEYADY 394

Query: 418 FGDNVVPSTVFRGTYRSSEE 477
           FG+  VP    RG  + ++E
Sbjct: 395 FGEETVP--YLRGLGQEAQE 412

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 10/146 (6%)
 Frame = +1

Query: 94   AVAAAIRQVFG---NAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTP 264
            A+ AA RQ+F    + Y+ +   A+   L S+     +T+KE + GL  +  Y   F  P
Sbjct: 739  AIRAAYRQIFERDLDPYIIQ---AEFTSLESKLGNEEITVKEFIEGLGCSDLYIKEFYAP 795

Query: 265  NSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
                +++EL  KH LGR P TQ E+  + Q L + G    I     + EY  LFG++ VP
Sbjct: 796  YPNTKVIELGTKHFLGRAPLTQKEIQKYNQILATEGIRGFIGAMVNSMEYLQLFGEDTVP 855

Query: 439  ----STVFRGTYRSSEE-FNRLCKSN 501
                 T+    + ++E  +N+L K +
Sbjct: 856  YRRFPTLPAANFPNTERLYNKLTKQD 881

[197][TOP]
>UniRef100_B4WI78 Phycobilisome protein n=1 Tax=Synechococcus sp. PCC 7335
           RepID=B4WI78_9SYNE
          Length = 905

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LS  + + A+ AA RQVF    +    +  ++ L S+ R   ++MKE +R LAK+  Y
Sbjct: 286 PGLSRLEKNEAIKAAYRQVFERD-ITRAYSQSISDLESKVRNGEISMKEFIRRLAKSPLY 344

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGPTQAEVSAHTQTLMSAG-----YDADIDTYFGAEY 408
           R +F  P    R +EL ++H+LGRGP+  E       ++S G      DA +D+    EY
Sbjct: 345 RRQFFEPFINSRALELAFRHILGRGPSSREEVQKYFAIVSEGGLSKLVDALVDS---QEY 401

Query: 409 DSLFGDNVVPSTVFRGTYRSSEE 477
              FG+  VP    RG  + ++E
Sbjct: 402 ADYFGEETVP--YIRGLGQEAQE 422

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
 Frame = +1

Query: 103  AAIRQVFG-NAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYR 279
            AA RQ+F  N   +  + ++ + L S+     + +KE + GL  +  Y   F  P    +
Sbjct: 735  AAYRQIFERNIDPYVVKGSEFSELESKLVNGEINVKEFIEGLGNSQLYIKEFYAPYPNTK 794

Query: 280  LVELNYKHLLGRGP-TQAEVSAHTQTLMSAG----YDADIDTYFGAEYDSLFGDNVVP-- 438
            ++EL  KH LGR P  Q E+  + + L S G      A +DT    EY   FG++ VP  
Sbjct: 795  VIELGTKHFLGRAPQDQGEIRKYNRILASEGIRGFIRALVDT---PEYAQYFGEDTVPYR 851

Query: 439  --STVFRGTYRSSE-EFNRLCKSN 501
               T+    + ++E  +NRL K +
Sbjct: 852  RFPTLPAANFPNTEILYNRLTKQS 875

[198][TOP]
>UniRef100_A0ZF10 Phycobilisome protein n=1 Tax=Nodularia spumigena CCY9414
           RepID=A0ZF10_NODSP
          Length = 1136

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LSA +    V AA RQ+F    +    +  ++ L S+ +  +++MKE VR LAK+  Y
Sbjct: 279 PGLSASEKIEVVKAAYRQLFERD-ITRAYSLSISDLESKVKNGDISMKEFVRRLAKSPLY 337

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           + +F  P    R++EL ++H+LGRGP ++ EV  +   + + G  A +D    + EY   
Sbjct: 338 QKQFYQPFINSRVIELAFRHILGRGPSSREEVQKYFAIISNGGLPALVDALVDSDEYGDY 397

Query: 418 FGDNVVPSTVFRGTYRSSEE 477
           FG+  VP    RG  + ++E
Sbjct: 398 FGEETVP--YLRGLGQEAQE 415

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
 Frame = +1

Query: 169  LTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAH 345
            L S+ R   ++++E VR LA +  YR RF TP    +++E  ++H+LGR P TQ E+  +
Sbjct: 1003 LDSKLRNGEISVREFVRELASSEIYRKRFYTPYPNTKVIEFLFRHILGRAPATQGEIRQY 1062

Query: 346  TQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
             + L  +G  A ++    + EY   FG++VVP
Sbjct: 1063 NKLLADSGLRAAVEAIVDSQEYARFFGEDVVP 1094

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
 Frame = +1

Query: 97   VAAAIRQVFGN---AYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
            ++AA RQ+F      Y+ + E    + L S+     +++KE + GL  +  Y   F TP 
Sbjct: 749  ISAAYRQIFERDVAPYIIKNE---FSALESKLGNGEISVKEFIAGLGYSNLYLKEFYTPY 805

Query: 268  STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP- 438
               +++E+  KH LGR P  QAE+  + Q L + G  A I+      EY   FG++ VP 
Sbjct: 806  PNTKVIEMGTKHFLGRAPIDQAEIRKYNQILATQGIRAFINAMVESVEYSQAFGEDTVPY 865

Query: 439  ---STVFRGTYRSSEE-FNRLCKSN 501
                T+    + ++++ +N+L K N
Sbjct: 866  RRFPTLPAANFPNTQKLYNQLTKQN 890

[199][TOP]
>UniRef100_B2J038 Phycobilisome linker polypeptide ApcE n=1 Tax=Nostoc punctiforme
           PCC 73102 RepID=B2J038_NOSP7
          Length = 1130

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
 Frame = +1

Query: 70  LSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRS 249
           LS+ + +  + AA RQ+F    +    +  ++ L S+ +  ++++KE VR LAK+  Y+ 
Sbjct: 301 LSSSEKNEVIKAAYRQIFERD-ITRAYSLSISDLESKVKNGDISVKEFVRRLAKSPLYQK 359

Query: 250 RFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFG 423
           +F  P    R+VEL ++H+LGRGP ++ EV  +   + + G  A +D     AEY   FG
Sbjct: 360 QFYQPFINSRVVELAFRHILGRGPSSREEVQKYFSIISNGGLPALVDALVDSAEYGDYFG 419

Query: 424 DNVVPSTVFRGTYRSSEE 477
           +  VP    RG  + ++E
Sbjct: 420 EETVP--YLRGLGQEAQE 435

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
 Frame = +1

Query: 169  LTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAH 345
            L S+ +   +++++ VR LA +  YR RF++P    ++VE  ++HLLGR P TQ E+  +
Sbjct: 1019 LDSKLQNGEISVRQFVRELASSEIYRQRFLSPYPHAKVVEFLFRHLLGRTPATQEEIRQY 1078

Query: 346  TQTLMSAGYDADIDTYF-GAEYDSLFGDNVVPSTVF 450
             Q L  +G  A ++      EY   FG++VVP   F
Sbjct: 1079 NQLLADSGLSAAVEAIVESPEYSRYFGEHVVPYNRF 1114

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
 Frame = +1

Query: 97   VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
            ++AA RQ+F           +     S+     +++KE + GL  +  Y   F TP    
Sbjct: 768  ISAAYRQIFERDVAPYIAKNEFTAWESKLGNGEISVKEFIEGLGYSNLYLKEFYTPYPNT 827

Query: 277  RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP---- 438
            +++EL  KH LGR P  QAE+  + Q L + G  A I       EY+ +FG++ VP    
Sbjct: 828  KVIELGTKHFLGRAPLDQAEIRKYNQILATQGIRAFIGALVDSVEYNQVFGEDTVPYRRF 887

Query: 439  STVFRGTYRSSEE-FNRLCKSN 501
             T+    + ++E+ +N+L K N
Sbjct: 888  PTLPAANFPNTEKLYNQLTKQN 909

[200][TOP]
>UniRef100_A9BDW1 Putative uncharacterized protein n=1 Tax=Prochlorococcus marinus
           str. MIT 9211 RepID=A9BDW1_PROM4
          Length = 269

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 37/117 (31%), Positives = 70/117 (59%), Gaps = 2/117 (1%)
 Frame = +1

Query: 94  AVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNST 273
           A+ ++ RQVFGN Y  E +      +  + R  ++ ++E +R LAK+  YR+ +    S 
Sbjct: 116 AIQSSYRQVFGNLYPMESQRP--IDIERRLRNGDIPIREFIRSLAKSTFYRNNYFDRVSQ 173

Query: 274 YRLVELNYKHLLGRGPTQA-EVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
            + ++L++KHLLGR    + E+ ++ + + S GY+A +D+   + EY+  FG+++VP
Sbjct: 174 KKCIQLSFKHLLGRPLFNSHELISNIELIHSEGYEAHVDSLVDSLEYEEFFGEDLVP 230

[201][TOP]
>UniRef100_Q3AMH3 C-phycoerythrin class II gamma chain, linker polypeptide n=1
           Tax=Synechococcus sp. CC9605 RepID=Q3AMH3_SYNSC
          Length = 288

 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 2/123 (1%)
 Frame = +1

Query: 76  AWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRF 255
           +W  +  +  A RQV+GN    E E      L ++     +T+++ V GLAK+  Y+  +
Sbjct: 78  SWALERTINDAYRQVYGNLPPTENER--YTSLEARLMNGEITVRDFVNGLAKSPFYKDNY 135

Query: 256 MTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFG-AEYDSLFGDN 429
               +  R +ELN+KHLLGR P  Q EV    +     G+DA ID+    AEY  +FG +
Sbjct: 136 FHSVAPQRGIELNFKHLLGRAPLNQEEVQNSIKLQAEEGFDALIDSLTDCAEYAEVFGSD 195

Query: 430 VVP 438
           +VP
Sbjct: 196 IVP 198

[202][TOP]
>UniRef100_B1WSU1 Phycobilisome core-membrane linker polypeptide n=1 Tax=Cyanothece
           sp. ATCC 51142 RepID=B1WSU1_CYAA5
          Length = 897

 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
 Frame = +1

Query: 25  PATYSSVDAT----IDAPRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGR 192
           P +Y +   T    +  P LS  +    + AA RQ+F    + +  +  ++ L SQ +  
Sbjct: 259 PQSYFNASLTRQKFVMKPGLSESEKGEIIRAAYRQIFERD-ITKAYSQSISYLESQVKNG 317

Query: 193 NLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAG 369
           +++MKE VR L K+  YR +F  P    R +EL ++H+LGRGP ++ EV  +   +   G
Sbjct: 318 DISMKEFVRRLCKSPLYRKQFFEPFINSRALELAFRHILGRGPSSREEVQNYFSIVSDGG 377

Query: 370 YDADIDTYFGA-EYDSLFGDNVVPSTVFRGTYRSSEE 477
             A +D    + EY   FG+  VP    RG  + ++E
Sbjct: 378 LAALVDALVDSQEYADYFGEETVP--YLRGLGQEAQE 412

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
 Frame = +1

Query: 94   AVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNST 273
            A+ AA RQ+F          A+   L S+     +T+KE + GL  +  Y   F TP   
Sbjct: 739  AIRAAYRQIFERDLAPYIVQAEFTGLESKLGNGEITVKEFIEGLGCSDLYIKEFYTPYPN 798

Query: 274  YRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP--- 438
             +++EL  KH LGR P TQ E+  + Q L + G    I     + EY  LFG++ VP   
Sbjct: 799  TKVIELGTKHFLGRAPLTQKEIQKYNQILATQGIRGFIGAMVNSMEYLQLFGEDTVPYRR 858

Query: 439  -STVFRGTYRSSEE-FNRLCKSN 501
              T+    + ++E  +N+L K +
Sbjct: 859  FPTLPAANFPNTERLYNKLTKQD 881

[203][TOP]
>UniRef100_Q2JTM6 Putative phycobilisome 120 kDa linker polypeptide, core n=1
            Tax=Synechococcus sp. JA-3-3Ab RepID=Q2JTM6_SYNJA
          Length = 898

 Score = 68.2 bits (165), Expect = 4e-10
 Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 7/142 (4%)
 Frame = +1

Query: 97   VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
            + AA RQVF         +A+++   S+ R   +T+KE +  L  +  YRS F  P    
Sbjct: 741  IRAAYRQVFERDMDIYNISAELSSAESKLRNGEITVKEFIEALGCSELYRSEFYAPYPNT 800

Query: 277  RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP---- 438
            +++EL  KH LGR P  Q E+  + Q L + G  A +       EY  LFG++ VP    
Sbjct: 801  KVIELGTKHFLGRAPLNQQEIRKYNQILATQGVKAFVRALLNTQEYRDLFGEDTVPYRRF 860

Query: 439  STVFRGTYRSSEE-FNRLCKSN 501
             T+    + +++E + RL K N
Sbjct: 861  PTLPAANFPNTQELYGRLTKQN 882

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LS  + +  + AA RQVF    +       ++ L S+ +   ++MKE +R L K+  Y
Sbjct: 271 PGLSNAEKEEVIKAAYRQVFERD-IRRAYGLKLSNLESKVKNGEISMKEFIRRLGKSELY 329

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F  P    R+VEL ++H LGR P T+ EV  +   + S G    +D    + EY   
Sbjct: 330 RKQFYEPYINSRVVELAFRHFLGRAPETREEVQTYFSIVSSKGLAGLVDALVDSREYGDY 389

Query: 418 FGDNVVP 438
           FG+  VP
Sbjct: 390 FGEETVP 396

[204][TOP]
>UniRef100_Q2JTJ0 Putative phycobilisome 120 kDa linker polypeptide, core n=1
            Tax=Synechococcus sp. JA-3-3Ab RepID=Q2JTJ0_SYNJA
          Length = 899

 Score = 68.2 bits (165), Expect = 4e-10
 Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 7/142 (4%)
 Frame = +1

Query: 97   VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
            + AA RQ+F         +A+++   S+ R   +T+KE V  L  +  YRS F  P    
Sbjct: 741  IRAAYRQIFERDMDIYNISAELSSAESKLRNGEITVKEFVEALGCSELYRSEFYAPYPNT 800

Query: 277  RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP---- 438
            +++EL  KH LGR P  Q E+  + Q L + G  A +       EY  LFG++ VP    
Sbjct: 801  KVIELGTKHFLGRAPLNQQEIRKYNQILATQGLKAFVRALLNTQEYRDLFGEDTVPYRRF 860

Query: 439  STVFRGTYRSSEE-FNRLCKSN 501
             T+    + +++E + RL K N
Sbjct: 861  PTLPAANFPNTQELYGRLTKQN 882

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LS  + +  + AA RQVF    +       +A L S+ +   ++MKE +R L K+  Y
Sbjct: 271 PGLSNAEKEEVIKAAYRQVFERD-IRRAYGLKLADLESKVKNGEISMKEFIRRLGKSELY 329

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F  P    R+VEL ++H LGR P T+ EV  +   + S G    +D    + EY   
Sbjct: 330 RKQFYEPYINSRVVELAFRHFLGRAPETREEVQTYFAIVSSKGLAGLVDALVDSREYGDY 389

Query: 418 FGDNVVP 438
           FG+  VP
Sbjct: 390 FGEETVP 396

[205][TOP]
>UniRef100_Q2JP69 Putative phycobilisome 120 kDa linker polypeptide, core n=1
            Tax=Synechococcus sp. JA-2-3B'a(2-13) RepID=Q2JP69_SYNJB
          Length = 897

 Score = 68.2 bits (165), Expect = 4e-10
 Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 7/142 (4%)
 Frame = +1

Query: 97   VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
            + AA RQVF         +A+++   S+ R   +T+KE +  L  +  YRS F  P    
Sbjct: 740  IRAAYRQVFERDMDIYNISAELSSAESKLRNGEITVKEFIEALGCSELYRSEFYAPYPNT 799

Query: 277  RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP---- 438
            +++EL  KH LGR P  Q E+  + Q L + G  A +       EY  LFG++ VP    
Sbjct: 800  KVIELGTKHFLGRAPLNQQEIRKYNQILATQGVKAFVRALLNTQEYRDLFGEDTVPYRRF 859

Query: 439  STVFRGTYRSSEE-FNRLCKSN 501
             T+    + +++E + RL K N
Sbjct: 860  PTLPAANFPNTQELYGRLTKQN 881

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LS  + +  + AA RQVF    +       ++ L S+ +   ++MKE +R L K+  Y
Sbjct: 271 PGLSNAEKEEVIKAAYRQVFERD-IRRAYGLKLSDLESKVKNGEISMKEFIRRLGKSELY 329

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F  P    R+VEL ++H LGR P T+ EV  +   + S G    +D    + EY   
Sbjct: 330 RKQFYEPYINSRVVELAFRHFLGRAPETREEVQTYFSIISSKGLAGLVDALVDSREYGDY 389

Query: 418 FGDNVVP 438
           FG+  VP
Sbjct: 390 FGEETVP 396

[206][TOP]
>UniRef100_A3IMR4 Phycobilisome LCM core-membrane linker polypeptide n=1
           Tax=Cyanothece sp. CCY0110 RepID=A3IMR4_9CHRO
          Length = 897

 Score = 68.2 bits (165), Expect = 4e-10
 Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
 Frame = +1

Query: 25  PATYSSVDAT----IDAPRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGR 192
           P +Y +   T    +  P LS  +    + AA RQ+F    + +  +  ++ L SQ +  
Sbjct: 259 PQSYFNASVTRQKFVMKPGLSELEKGEIIRAAYRQLFERD-ITKAYSQSISYLESQVKNG 317

Query: 193 NLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAG 369
           +++MKE VR L K+  YR +F  P    R +EL ++H+LGRGP ++ EV  +   +   G
Sbjct: 318 DISMKEFVRRLCKSPLYRKQFFEPFINSRALELAFRHILGRGPSSREEVQNYFAIVSDGG 377

Query: 370 YDADIDTYFGA-EYDSLFGDNVVPSTVFRGTYRSSEE 477
             A +D    + EY   FG+  VP    RG  + ++E
Sbjct: 378 LAALVDALVDSQEYADYFGEETVP--YLRGLGQEAQE 412

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 10/146 (6%)
 Frame = +1

Query: 94   AVAAAIRQVFG---NAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTP 264
            A+ AA RQ+F    + Y+ +   A+   L S+     +T+KE ++GL  +  Y   F TP
Sbjct: 739  AIRAAYRQIFERDLDPYIIQ---AEFTALESKLGNGEITVKEFIQGLGYSDLYIKEFYTP 795

Query: 265  NSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
                +++EL  KH LGR P TQ E+  + Q L + G    I     + EY  LFG++ VP
Sbjct: 796  YPNTKVIELGTKHFLGRAPLTQKEIQKYNQILATQGIRGFIGAMVNSMEYLQLFGEDTVP 855

Query: 439  ----STVFRGTYRSSEE-FNRLCKSN 501
                 T+    + ++E  +N+L K +
Sbjct: 856  YRRFPTLPAANFPNTERLYNKLTKQD 881

[207][TOP]
>UniRef100_P50040 Phycobilisome rod-core linker polypeptide cpcG2 n=1
           Tax=Thermosynechococcus elongatus BP-1 RepID=PYG2_THEEB
          Length = 246

 Score = 67.8 bits (164), Expect = 5e-10
 Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
 Frame = +1

Query: 25  PATYSSVDATIDAPRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTM 204
           P  YS  DA   +      D D  + AA RQVF    + +        L SQ   R +++
Sbjct: 28  PWRYSLEDAVDQS------DIDELIWAAYRQVFSEHVVLKSTRQPH--LESQLANRAISV 79

Query: 205 KELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDAD 381
           ++ +RGLAK+  +R   +  NS YRLVE+  K LLGR P  + E  A +  + + G+   
Sbjct: 80  RDFIRGLAKSETFRRLVVETNSNYRLVEIALKRLLGRAPYNKQEELAWSIRIATDGWQKF 139

Query: 382 IDTYFGA-EYDSLFGDNVVP 438
           +DT   + EY   FGDN VP
Sbjct: 140 VDTLVDSDEYTQNFGDNTVP 159

[208][TOP]
>UniRef100_A0ZKM2 Phycobilisome rod-core linker protein n=1 Tax=Nodularia spumigena
           CCY9414 RepID=A0ZKM2_NODSP
          Length = 247

 Score = 67.4 bits (163), Expect = 7e-10
 Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 9/136 (6%)
 Frame = +1

Query: 58  DAPRL-----SAWDGDVA--VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELV 216
           D PR+      A+D +V   + AA RQ+F    + +        L SQ + R +T+++ +
Sbjct: 26  DTPRIYRIEDCAFDSEVQELIWAAYRQIFSEHEILKFYRQ--TNLESQIKNRAITVRDFI 83

Query: 217 RGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTY 393
           RGLAK+  +R+  +  NS YRLV++  K +LGR    + E  A +  + + G++  +D  
Sbjct: 84  RGLAKSETFRNLVVQTNSNYRLVDIALKRILGRASYNKDEEIAWSIKIATLGWNGFVDAL 143

Query: 394 FGA-EYDSLFGDNVVP 438
             + EY S FGDN+VP
Sbjct: 144 INSQEYQSNFGDNIVP 159

[209][TOP]
>UniRef100_P50039 Phycobilisome rod-core linker polypeptide cpcG1 n=1
           Tax=Thermosynechococcus elongatus BP-1 RepID=PYG1_THEEB
          Length = 277

 Score = 67.4 bits (163), Expect = 7e-10
 Identities = 52/156 (33%), Positives = 77/156 (49%), Gaps = 3/156 (1%)
 Frame = +1

Query: 25  PATYSSVDATIDAPRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTM 204
           P  Y   DAT DA  +     D  + AA RQ+F    +          L SQ R R +++
Sbjct: 28  PVIYRLTDAT-DAAAV-----DALIWAAYRQIFSEHLILASYRQPF--LESQLRNRAISV 79

Query: 205 KELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGPT--QAEVSAHTQTLMSAGYDA 378
           ++ +RGL K+  YR +    NS YRLV++++K  LGR PT  Q E  A +  L + G + 
Sbjct: 80  RDFIRGLGKSEVYREQVAAVNSNYRLVDISFKRFLGR-PTYGQQEQIAWSIILATRGLEG 138

Query: 379 DIDTYFGA-EYDSLFGDNVVPSTVFRGTYRSSEEFN 483
            ID    + EY   FG ++VP   ++   R +  FN
Sbjct: 139 FIDALVDSDEYQQNFGADIVP---YQRRRRMARPFN 171

[210][TOP]
>UniRef100_B8HR81 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 7425
           RepID=B8HR81_CYAP4
          Length = 251

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
 Frame = +1

Query: 82  DGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMT 261
           D DV + AA RQ+F +A+  + + A    L SQ R   +T+++ +RGL  +  +R  F  
Sbjct: 41  DMDVLIEAAYRQIFFHAFAVDRQVA----LESQLRNGQITVRDFIRGLLLSETFRRSFYD 96

Query: 262 PNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVV 435
            NS YR VE   + +LGR   +Q E  A +  +MS G    +D    + EY + FG+N V
Sbjct: 97  LNSNYRFVEHCVQKVLGRDVYSQREKIAWSAVVMSKGVKGFVDELLNSEEYLTNFGENTV 156

Query: 436 P 438
           P
Sbjct: 157 P 157

[211][TOP]
>UniRef100_A9UKJ2 Phycocyanin (Fragment) n=1 Tax=Arthrospira platensis FACHB341
           RepID=A9UKJ2_SPIPL
          Length = 119

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 36/86 (41%), Positives = 47/86 (54%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P  +  D    + AA RQV GN +L + E    A   S  R   +T+++ VR LA +  Y
Sbjct: 25  PNFTEGDVQAVIWAAYRQVMGNEHLMQRERLTSA--ESLLRQGEITVRDFVRALAVSELY 82

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGP 321
           R +F   NS  R +ELNYKHLLGR P
Sbjct: 83  RKKFFYGNSQVRFIELNYKHLLGRAP 108

[212][TOP]
>UniRef100_Q3M8Y9 Phycobilisome linker polypeptide n=1 Tax=Anabaena variabilis ATCC
           29413 RepID=Q3M8Y9_ANAVT
          Length = 279

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 46/140 (32%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
 Frame = +1

Query: 25  PATYSSVDATIDAPRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTM 204
           P  Y    A  DA      D D  + AA RQ+F    + +      + L SQ R R + +
Sbjct: 28  PTIYRLAAAIDDA------DVDAIIWAAYRQIFSEHLIIKSNRQ--SFLESQLRNRAINV 79

Query: 205 KELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDAD 381
           ++ +RGL K+  YR++    NS YRLV++  K  LGR    Q E  A +  + + G    
Sbjct: 80  RDFIRGLGKSEVYRTQVAELNSNYRLVDITLKRFLGRAAYNQDEEIAWSIVIGTQGLHGF 139

Query: 382 IDTYFGA-EYDSLFGDNVVP 438
           ID    + EY   FGD++VP
Sbjct: 140 IDALLDSDEYRENFGDDIVP 159

[213][TOP]
>UniRef100_O06838 Phycoerythrin class III gamma chain n=1 Tax=Prochlorococcus marinus
           RepID=O06838_PROMA
          Length = 270

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           ++AV AA +Q+FGN    E E      L  + R  ++ ++E +R LAK+  Y   F+   
Sbjct: 119 EIAVVAAYKQIFGNLNPMESERPKE--LERRLRNGDIPIREFIRSLAKSEFYSRHFIERV 176

Query: 268 STYRLVELNYKHLLGRG-PTQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
           S  R VEL + HLLGR    ++E+  +   +   G+++ ID+   + EY+  FG+++VP
Sbjct: 177 SQIRSVELRFMHLLGRPLKDESELINNINFIREKGFESHIDSLMNSLEYEEHFGEDIVP 235

[214][TOP]
>UniRef100_A5GIZ8 Phycobilisome linker polypeptide, C-phycoerythrin class
           II-associated n=1 Tax=Synechococcus sp. WH 7803
           RepID=A5GIZ8_SYNPW
          Length = 286

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
 Frame = +1

Query: 94  AVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNST 273
           A++AA +QVFGN  + + +   +  L +  R   +T ++ + GL K+  Y+  F    S 
Sbjct: 84  AISAAYKQVFGNIGITDSQR--LVSLEAFLRDGRITTRDFMAGLVKSELYKQTFFFAVSP 141

Query: 274 YRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP 438
            R VEL  KHLLGR P +Q+EV A  + +   G+DA +D      EY   FG + VP
Sbjct: 142 MRGVELTVKHLLGRPPVSQSEVGAAIKMIADEGFDAFVDHLVRSEEYLETFGTDTVP 198

[215][TOP]
>UniRef100_A2C0E6 Putative uncharacterized protein n=1 Tax=Prochlorococcus marinus
           str. NATL1A RepID=A2C0E6_PROM1
          Length = 263

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 36/118 (30%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
 Frame = +1

Query: 91  VAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNS 270
           VA+ A  + +FGN  L + E      +  + R  +LT++E  R + K+  YR+ +    S
Sbjct: 113 VAINALYKHIFGNLSLMQSERP--IDIERKLRNGDLTVREFTRKICKSTIYRNFYFDGIS 170

Query: 271 TYRLVELNYKHLLGRG-PTQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
            Y+ ++L YKH+LGR   ++ EV+  +  + + G++  ID    + EY+ +FG+++VP
Sbjct: 171 QYKAIKLRYKHILGRPIKSKDEVTQSSNIINNLGFEEHIDFLIDSNEYNKIFGEDIVP 228

[216][TOP]
>UniRef100_P29732 Phycobilisome rod-core linker polypeptide cpcG2 n=1
           Tax=Mastigocladus laminosus RepID=PYG2_MASLA
          Length = 247

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
 Frame = +1

Query: 58  DAPRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTA 237
           DAP  S  +    + AA RQ+F    + +        L SQ + R +T+++ +RGLAK+ 
Sbjct: 35  DAPSYS--EIQELIWAAYRQIFSEHEILKFHRQ--INLESQLKNRTITVRDFIRGLAKSE 90

Query: 238 AYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYD 411
           A++   +  NS YR+VE++ K +LGR P  + E  A +  + + G+   +D    + EY 
Sbjct: 91  AFQRLVVETNSNYRIVEISLKRILGRAPYNREEEIAWSIKIATDGFGGFVDALVDSEEYQ 150

Query: 412 SLFGDNVVP 438
             FGDN VP
Sbjct: 151 INFGDNTVP 159

[217][TOP]
>UniRef100_P29731 Phycobilisome rod-core linker polypeptide cpcG1 n=1
           Tax=Mastigocladus laminosus RepID=PYG1_MASLA
          Length = 279

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
 Frame = +1

Query: 25  PATYSSVDATIDAPRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTM 204
           P  Y   D + D       + D  + AA RQ+F    + E        L SQ R R + +
Sbjct: 28  PTIYRLTDTSSDT------EIDAIIWAAYRQIFSEHLILETYRQPY--LESQLRNRAINV 79

Query: 205 KELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDAD 381
           ++ +RGL K+  YR      NS YRLV++++K  LGR    ++E  A +  + + G    
Sbjct: 80  RDFIRGLGKSEVYRQEVAQTNSNYRLVDISFKRFLGRATYGKSEQIAWSIVIATQGLHGF 139

Query: 382 IDTYFGA-EYDSLFGDNVVP 438
           ID    + EY   FGD++VP
Sbjct: 140 IDALVDSEEYRQNFGDDIVP 159

[218][TOP]
>UniRef100_Q46H66 Phycoerythrin class III gamma chain n=1 Tax=Prochlorococcus marinus
           str. NATL2A RepID=Q46H66_PROMT
          Length = 263

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 36/118 (30%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
 Frame = +1

Query: 91  VAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNS 270
           VA+ A  + +FGN  L + E      +  + R  +LT++E  R + K+  YR+ +    S
Sbjct: 113 VAINALYKHIFGNLSLMQSERP--IDIERKLRNGDLTVREFTRKICKSTIYRNFYFDGIS 170

Query: 271 TYRLVELNYKHLLGRG-PTQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
            Y+ ++L YKH+LGR   ++ EV+  +  + + G++  ID    + EY+++FG+++VP
Sbjct: 171 QYKSIKLIYKHILGRPIKSKGEVTQSSNIINNLGFEEHIDFLIDSNEYNNIFGEDIVP 228

[219][TOP]
>UniRef100_Q31LK9 Phycobilisome rod-core linker polypeptide n=2 Tax=Synechococcus
           elongatus RepID=Q31LK9_SYNE7
          Length = 250

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           D  + AA RQ+F +A+  + +     VL SQ R   +T+++ +RGL  +A +RS F   N
Sbjct: 43  DEVIQAAYRQIFFHAFKCDRQT----VLESQLRNGQITVRDFIRGLLLSATFRSSFYDKN 98

Query: 268 STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
           S YR VE   + +LGR    + E  A +  + + GY+  IDT   + EY S FG + VP
Sbjct: 99  SNYRFVEQVVQRVLGRDVYGEREKIAWSLAVATQGYEGFIDTLLNSDEYLSNFGYDKVP 157

[220][TOP]
>UniRef100_B0JW16 Phycobilisome core-membrane linker polypeptide n=1 Tax=Microcystis
           aeruginosa NIES-843 RepID=B0JW16_MICAN
          Length = 901

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
 Frame = +1

Query: 70  LSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRS 249
           LS  +    + AA RQ+F    +    +  ++ L S+ +  +++MKE VR L K+  YR 
Sbjct: 281 LSESEKSSIIKAAYRQIFERD-ITRAYSQSISDLESKVKNGDISMKEFVRRLGKSPLYRK 339

Query: 250 RFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFG 423
           +F  P    R +EL ++H LGRGP ++ EV  +   + S G  A ID    + EY   FG
Sbjct: 340 QFFEPFINSRALELAFRHFLGRGPSSREEVQKYFSIVSSGGLAALIDALVDSQEYSDYFG 399

Query: 424 DNVVP 438
           +  VP
Sbjct: 400 EETVP 404

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
 Frame = +1

Query: 97   VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
            V AA RQ+F          A+   L S+     +T+KE + GL  +  Y   F  P    
Sbjct: 744  VRAAYRQIFERDLEPYIINAEFTALESKLSNAEITVKEFIEGLGCSDLYLKEFYAPYPNT 803

Query: 277  RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP---- 438
            +++EL  KH LGR P  Q E+  + Q L + G  A I     + EY  LFG++ VP    
Sbjct: 804  KVIELGTKHFLGRAPLNQKEIQKYNQILATKGLKAFIGAMVNSMEYLQLFGEDTVPYRRF 863

Query: 439  STVFRGTYRSSEE-FNRLCKSNA 504
             T+    + ++E  +N+L K ++
Sbjct: 864  PTLPAANFPNTERLYNKLTKQDS 886

[221][TOP]
>UniRef100_A8YC96 ApcE protein n=1 Tax=Microcystis aeruginosa PCC 7806
           RepID=A8YC96_MICAE
          Length = 901

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
 Frame = +1

Query: 70  LSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRS 249
           LS  +    + AA RQ+F    +    +  ++ L S+ +  +++MKE VR L K+  YR 
Sbjct: 281 LSESEKSSIIKAAYRQIFERD-ITRAYSQSISDLESKVKNGDISMKEFVRRLGKSPLYRK 339

Query: 250 RFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFG 423
           +F  P    R +EL ++H LGRGP ++ EV  +   + S G  A ID    + EY   FG
Sbjct: 340 QFFEPFINSRALELAFRHFLGRGPSSREEVQKYFSIVSSGGLAALIDALVDSQEYSDYFG 399

Query: 424 DNVVP 438
           +  VP
Sbjct: 400 EETVP 404

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
 Frame = +1

Query: 97   VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
            V AA RQ+F          A+   L S+     +T+KE + GL  +  Y   F  P    
Sbjct: 744  VRAAYRQIFERDLEPYIINAEFTALESKLSNAEITVKEFIEGLGGSDLYLKEFYAPYPNT 803

Query: 277  RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP---- 438
            +++EL  KH LGR P  Q E+  + Q L + G  A I     + EY  LFG++ VP    
Sbjct: 804  KVIELGTKHFLGRAPLNQKEIQKYNQILATQGLKAFIGAMVNSMEYLQLFGEDTVPYRRF 863

Query: 439  STVFRGTYRSSEE-FNRLCKSNA 504
             T+    + ++E  +N+L K ++
Sbjct: 864  PTLPAANFPNTERLYNKLTKQDS 886

[222][TOP]
>UniRef100_P29986 Phycobilisome rod-core linker polypeptide cpcG1 n=1 Tax=Nostoc sp.
           PCC 7120 RepID=PYG1_ANASP
          Length = 279

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 46/140 (32%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
 Frame = +1

Query: 25  PATYSSVDATIDAPRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTM 204
           P  Y    A  DA      D D  + A  RQ+F    + +      + L SQ R R + +
Sbjct: 28  PTIYRLAAAIDDA------DVDAIIWAGYRQIFSEHLIIKSNRQ--SFLESQLRNRAINV 79

Query: 205 KELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDAD 381
           ++ +RGL K+  YR++    NS YRLV++  K  LGR    Q E  A +  + S G    
Sbjct: 80  RDFIRGLGKSEVYRTQVADLNSNYRLVDITLKRFLGRAAYNQDEEIAWSIVIGSQGLHGF 139

Query: 382 IDTYFGA-EYDSLFGDNVVP 438
           ID    + EY   FGD++VP
Sbjct: 140 IDALLDSDEYRENFGDDIVP 159

[223][TOP]
>UniRef100_P48088 Phycobilisome linker polypeptide n=1 Tax=Cyanophora paradoxa
            RepID=APCE_CYAPA
          Length = 883

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
 Frame = +1

Query: 97   VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
            + A  RQVF           +  V  S+ + + +++KE V  L ++  Y+  F TP    
Sbjct: 719  IKAVYRQVFERDMDMYRIQNEFTVFESRLKNKEISVKEFVEALGQSQLYQKEFYTPYPNT 778

Query: 277  RLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVV----- 435
            +++EL  KH LGR P  Q E+  + Q L S G  A I +   + EY  +FG++ V     
Sbjct: 779  KVIELAMKHFLGRAPKNQIEIRKYNQLLASNGIAALIRSLVSSLEYAEVFGEDTVPYRRF 838

Query: 436  ---PSTVFRGTYRSSEEFNRLCKSNAGPAASDKAKRGLNML 549
               P+T F  T +      +  K+ + P+ + +  R +++L
Sbjct: 839  PTFPATNFPNTEKLYNSLTKQTKTISNPSFAPEKTRRIDLL 879

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 51/171 (29%), Positives = 75/171 (43%), Gaps = 25/171 (14%)
 Frame = +1

Query: 1   PAPFPCARPATYSSV----------DATIDAPR------LSAWDGDVAVAAAIRQVFGN- 129
           PAP    R  T +S+          +A +  PR      LS  + +  + A  RQ+F   
Sbjct: 225 PAPSDLVRKRTSTSLQGLKLPQIYANAVVQKPRFQMKSTLSTTEKETVIKAVYRQIFERD 284

Query: 130 ---AYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYK 300
              AY  +        L S+ +   L++KE VR L K+  Y  +F  P    R +EL ++
Sbjct: 285 VRRAYSLKNYD-----LESKVKNGQLSIKEFVRALGKSKLYAQQFYEPFINSRALELAFR 339

Query: 301 HLLGRGPTQAEVSAHTQTLMSAG-----YDADIDTYFGAEYDSLFGDNVVP 438
           H LGRGP   E       L+S G      DA +D+    EY+  FG+ +VP
Sbjct: 340 HFLGRGPGSREEVQEYFALISKGGLPLLVDALVDS---KEYEEYFGEEIVP 387

[224][TOP]
>UniRef100_Q85FW8 Phycobilisome linker polypeptide n=1 Tax=Cyanidioschyzon merolae
            RepID=Q85FW8_CYAME
          Length = 840

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 7/151 (4%)
 Frame = +1

Query: 70   LSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRS 249
            L   D  V   AA+RQ+F       +E   + V   +F    ++++ELV+ LA T  Y  
Sbjct: 677  LERQDRLVVFEAAVRQIFERNMWANKELETLQV---KFLQGEMSVRELVKALATTKLYVK 733

Query: 250  RFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFG 423
             F  P    +++EL  KH+LGR    QAE+  + Q L   G +A +      AEY +LFG
Sbjct: 734  EFYQPYPNTQVIELATKHILGRAVLNQAEIRYYNQILAREGLEAMVSRMVNSAEYRNLFG 793

Query: 424  DNVVP----STVFRGTYRSSEE-FNRLCKSN 501
            +N VP     T+    + ++++ +NRL K N
Sbjct: 794  ENQVPYRRFPTLPAANFPNTQKLYNRLTKQN 824

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LS+ +    + A  RQVF    +F      +  L S+   + +++KE +R L ++  Y
Sbjct: 259 PNLSSEERKQVIRACYRQVFERDIVFGY-GLSLGELESKALQQQISIKEFIRALGQSEIY 317

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGPTQ-AEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R +F  P    R+VEL +KH LGR P+   E + +   + S G    +D    + EY   
Sbjct: 318 RRQFYQPFVNSRVVELAFKHFLGRAPSSLKEWNEYFAIVSSRGLKGLVDALINSKEYADY 377

Query: 418 FGDNVVP 438
           FG+  VP
Sbjct: 378 FGEETVP 384

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 3/160 (1%)
 Frame = +1

Query: 1   PAPFPCARPATYSSVDATIDAPRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQ 180
           P   P A P      +A I+            + AAI +VFG   +++E+   +  L ++
Sbjct: 488 PCQLPSALPQDRLEANAPIERQ----------IQAAIIRVFGRD-VYQEQKQWLKPLENE 536

Query: 181 FRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGPT--QAEVSAHTQT 354
            R + +T++E +R LAK+  +R+ + +     + +E  +  LLGR PT  + E+ A+   
Sbjct: 537 LRRKTITLREFIRQLAKSDEFRNLYWSRLYVCKAIEYIHIRLLGR-PTYGRREIEAYFDI 595

Query: 355 LMSAGYDADIDTYFGA-EYDSLFGDNVVPSTVFRGTYRSS 471
              +G+   ID    + EY   FGD  VP   +R    SS
Sbjct: 596 AAKSGFYTLIDAMVDSEEYKRNFGDQTVPYDRYRAALSSS 635

[225][TOP]
>UniRef100_Q1XDM4 Phycobilisome linker polypeptide n=1 Tax=Porphyra yezoensis
           RepID=APCE_PORYE
          Length = 886

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 10/148 (6%)
 Frame = +1

Query: 25  PATYSSVDATIDAPR------LSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAV--LTSQ 180
           P TY  V A +  PR      LSA + ++ V A  RQ+F        +A D+++  L SQ
Sbjct: 251 PQTY--VQAGVSTPRFVMKPSLSADEKNIVVKACYRQIFERDIA---KAYDLSLSNLESQ 305

Query: 181 FRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGPTQ-AEVSAHTQTL 357
            +   +++KE +R L  ++ YR +F  P    R +EL ++H LGRGP+   E   +   L
Sbjct: 306 VKNGQISIKEFIRSLGTSSIYRKQFYEPFVNSRALELAFRHFLGRGPSSLEEFQKYFAIL 365

Query: 358 MSAGYDADIDTYF-GAEYDSLFGDNVVP 438
            S G    ++     +EY   FG+  VP
Sbjct: 366 SSTGLSGLVNALLNSSEYTDYFGEETVP 393

 Score = 63.9 bits (154), Expect = 8e-09
 Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
 Frame = +1

Query: 94   AVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNST 273
            A+ AA RQ+F           +   + S F  R + +KELV  LA +  Y   F  P   
Sbjct: 729  ALRAAYRQIFERDLNSFSVGGEFLDIKSAFLNRQICVKELVEKLALSELYGKEFYQPYPN 788

Query: 274  YRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP--- 438
             +++EL  KH+LGR P  QAE+    Q L S G  A I       EY++++G + VP   
Sbjct: 789  TKVIELGTKHILGRAPNNQAEIRFFNQILASKGLSAFISNLVESVEYNAVYGKDTVPYRR 848

Query: 439  -STVFRGTYRSSEE-FNRLCKSN 501
              T+    + ++E  +NRL K +
Sbjct: 849  FPTLPAANFPNTETLYNRLTKQD 871

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           +V    A  +VFG   +++EE   +  + SQ +   +T++E VR LAK++ +RS +  P 
Sbjct: 530 EVVTKVAYLRVFGRE-VYQEEKLILKPIESQLKDNQITVREFVRQLAKSSIFRSLYWEPL 588

Query: 268 STYRLVELNYKHLLGRGPT--QAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP 438
              + +E  +  LLGR PT  + E++ +       GY   IDT    +EY   FGDN VP
Sbjct: 589 YICKAIEYIHNRLLGR-PTYGRQEINKYFDIAYKQGYYQVIDTIIDSSEYTETFGDNTVP 647

[226][TOP]
>UniRef100_B9YI82 Phycobilisome linker polypeptide n=1 Tax='Nostoc azollae' 0708
           RepID=B9YI82_ANAAZ
          Length = 276

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
 Frame = +1

Query: 25  PATYSSVDATIDAPRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTM 204
           P+ Y    AT DA      D D  + A  RQ+F    + E      + L SQ R R + +
Sbjct: 28  PSMYRLNTATSDA------DIDAIIWAGYRQIFSEHLILESYRQ--SFLESQLRNRAINV 79

Query: 205 KELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDAD 381
           ++ +RGL K+  YR++    NS YRLV++  +  LGR    + E  A +  + + G    
Sbjct: 80  RDFIRGLGKSHVYRTQVGEINSNYRLVDITLQRFLGRAAYNKDEEIAWSIVIATKGLHGF 139

Query: 382 IDTYFGA-EYDSLFGDNVVP 438
           ID    + EY   FGD++VP
Sbjct: 140 IDALLDSDEYQENFGDHIVP 159

[227][TOP]
>UniRef100_Q6B8S8 Phycobilisome linker polypeptide n=1 Tax=Gracilaria tenuistipitata
           var. liui RepID=Q6B8S8_GRATL
          Length = 878

 Score = 63.9 bits (154), Expect = 8e-09
 Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
 Frame = +1

Query: 70  LSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRS 249
           LS+ + ++ + A  RQ+F    + +    +   L SQ +   L++KE +R L K+  YR 
Sbjct: 270 LSSEEKNMVIKACYRQIFQRD-ISKAYGLNFTDLESQVKNGTLSLKEFIRYLGKSYIYRK 328

Query: 250 RFMTPNSTYRLVELNYKHLLGRG-PTQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFG 423
           +F+ P +  R++EL ++H LGRG  +  E   +   L S G D  ID    + EY   FG
Sbjct: 329 QFVQPFTNSRVIELAFRHFLGRGLSSLEEFKKYFGVLSSRGLDGLIDRLLNSNEYSDYFG 388

Query: 424 DNVVP 438
           +  VP
Sbjct: 389 EETVP 393

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 10/164 (6%)
 Frame = +1

Query: 40   SVDATIDAPRLSAWDGDVAVAAAIRQVFG---NAYLFEEEAADVAVLTSQFRGRNLTMKE 210
            +VD+++DA  +        + A  RQ+F    N+++  +E  +   L   F  R +T++ 
Sbjct: 708  TVDSSMDAASMFQ-----ILRAVYRQIFERDLNSFIVGDEFFN---LEKAFVNRQITVRS 759

Query: 211  LVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADID 387
            LV  L  ++ Y   F  P    +++EL  KH LGR P  QAE+    Q L S G    I 
Sbjct: 760  LVEKLGSSSLYAKEFYQPYPNTKVIELGTKHFLGRAPNNQAEIRYFNQILASQGLAYFIS 819

Query: 388  TYFGA-EYDSLFGDNVVP----STVFRGTYRSSEE-FNRLCKSN 501
            T   + EY+ +FG N VP     T+    + ++E+ +NRL K +
Sbjct: 820  TLVNSKEYEVIFGINTVPYRRFPTLPAANFPNTEKLYNRLTKQS 863

[228][TOP]
>UniRef100_P73093 Phycobilisome rod-core linker polypeptide; CpcG n=1
           Tax=Synechocystis sp. PCC 6803 RepID=P73093_SYNY3
          Length = 235

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
 Frame = +1

Query: 70  LSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRS 249
           LS+ D D  + AA RQ+F +A+ ++ E     VL SQ R   +T+++ VRGL  +  +R+
Sbjct: 23  LSSSDMDNLIEAAYRQIFFHAFKWDREK----VLESQLRNGQITVRDFVRGLLLSNTFRN 78

Query: 250 RFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFG 423
            F   NS YR VE   + +LGR   ++ E  A +  + + GY   ID    + EY + FG
Sbjct: 79  SFYEKNSNYRFVEHCVQKILGRDVYSEREKIAWSIVVATKGYQGLIDDLLNSDEYLNNFG 138

Query: 424 DNVVP 438
            + VP
Sbjct: 139 YDTVP 143

[229][TOP]
>UniRef100_Q3AJE9 Possible phycobilisome linker polypeptide n=1 Tax=Synechococcus sp.
           CC9605 RepID=Q3AJE9_SYNSC
          Length = 290

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           + A+ A  +QVFGN  + + +   V++      GR + ++  + GL K+  Y+++F    
Sbjct: 82  EAAITAGYKQVFGNIGISDNQRL-VSLEAFLCDGR-INVQGFMAGLVKSELYKNKFFHAV 139

Query: 268 STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP 438
           S  R +EL  KHLLGR P  Q EVSA  Q + + G+DA +D+     EY   FG + VP
Sbjct: 140 SPMRGIELTTKHLLGRPPINQKEVSAGIQLIAAEGFDAFVDSLVRSEEYLETFGTDTVP 198

[230][TOP]
>UniRef100_Q112Y5 Phycobilisome linker polypeptide n=1 Tax=Trichodesmium erythraeum
            IMS101 RepID=Q112Y5_TRIEI
          Length = 913

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 41/145 (28%), Positives = 72/145 (49%), Gaps = 7/145 (4%)
 Frame = +1

Query: 88   DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
            ++ +AAA RQ+F          ++ + L S+ +  ++ +KE +  L  +  Y   F TP 
Sbjct: 752  NLVIAAAYRQIFERDMPPFIMRSEFSFLESKLKNNDINLKEFIEELGCSQVYIKEFYTPY 811

Query: 268  STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP- 438
               +++EL  KH LGR P  Q E+  + Q L + G    ++    + EY  LFGD+ VP 
Sbjct: 812  PNTKVIELGTKHFLGRAPRDQVEIRKYNQILATLGIKGFVNAMVNSDEYIELFGDDTVPY 871

Query: 439  ---STVFRGTYRSSEE-FNRLCKSN 501
                T+    + ++E  +N+L + N
Sbjct: 872  RRFPTLPAANFPNTERLYNQLTRQN 896

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LS ++    V AA RQVF    +    + +++ L SQ +   ++MKE +R L K+  Y
Sbjct: 282 PGLSNFEKQDVVKAAYRQVFERD-ITRAYSLNISYLESQVKNCEISMKEFIRRLGKSPLY 340

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGPTQAE-----VSAHTQTLMSAGYDADIDTYFGAEY 408
           + +F       R+VEL  +H LGRG +  E         T+  +SA  DA +D+    EY
Sbjct: 341 QKQFYEGFVNSRVVELATRHFLGRGLSSPEEFRKYFDIVTKGGLSALVDAMVDS---QEY 397

Query: 409 DSLFGDNVVPSTVFRGTYRSSEE 477
              FG+  VP    RG  + ++E
Sbjct: 398 SDYFGEETVP--YLRGLGQEAQE 418

[231][TOP]
>UniRef100_A0ZKM3 Phycobilisome linker polypeptide n=1 Tax=Nodularia spumigena
           CCY9414 RepID=A0ZKM3_NODSP
          Length = 279

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
 Frame = +1

Query: 25  PATYSSVDATIDAPRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTM 204
           P  Y    AT D       D D  + AA RQ+F    +          L SQ R R + +
Sbjct: 28  PTMYRLAAATSDT------DIDAIIWAAYRQIFSEHLIIASNRQKF--LESQLRNRAINV 79

Query: 205 KELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDAD 381
           ++ +RGL K+  YR++    N+ YRLV++  K  +GR    + E  A +  + + G    
Sbjct: 80  RDFIRGLGKSEVYRTQVADINTNYRLVDITLKRFVGRAAYNKDEEIAWSIVIGTKGLHGF 139

Query: 382 IDTYFGA-EYDSLFGDNVVP 438
           IDT   + EY   FGD++VP
Sbjct: 140 IDTLLDSEEYLQNFGDDIVP 159

[232][TOP]
>UniRef100_B8HR80 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 7425
           RepID=B8HR80_CYAP4
          Length = 244

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
 Frame = +1

Query: 70  LSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRS 249
           LS  D DV ++AA RQVF    +        A   SQ R   + +++ +R LA +  +RS
Sbjct: 37  LSPADLDVLISAAYRQVFNEQQMTLSTRRTFAEAESQLRIGQINVRDFIRALATSDIFRS 96

Query: 250 RFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFG 423
           R   PNS YR V++  + LLGR   ++ E  A +  L + G +  I       EY   FG
Sbjct: 97  RNYDPNSNYRFVQICIQRLLGREVYSEREKIAWSIVLATQGLNGFISALLNTQEYLDNFG 156

Query: 424 DNVVP 438
           +N VP
Sbjct: 157 ENTVP 161

[233][TOP]
>UniRef100_D0CJL6 Phycobilisome linker polypeptide, C-phycoerythrin class
           II-associated n=1 Tax=Synechococcus sp. WH 8109
           RepID=D0CJL6_9SYNE
          Length = 290

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 42/119 (35%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
 Frame = +1

Query: 88  DVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
           + A+ A  +QVFGN  + + +   V++      GR + ++  + GL K+  Y+ +F    
Sbjct: 82  EAAITAGYKQVFGNIGISDNQRL-VSLEAFLCDGR-INVQGFMAGLVKSELYKQKFFHAV 139

Query: 268 STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSLFGDNVVP 438
           S  R +EL  KHLLGR P  Q EVSA  Q +   G+DA +D+     EY   FG + VP
Sbjct: 140 SPMRGIELTTKHLLGRPPINQKEVSAGIQLIAEEGFDAFVDSLVRSEEYLETFGTDTVP 198

[234][TOP]
>UniRef100_P35911 Phycobilisome linker polypeptide n=1 Tax=Galdieria sulphuraria
            RepID=APCE_GALSU
          Length = 863

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 9/135 (6%)
 Frame = +1

Query: 97   VAAAIRQVFG---NAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPN 267
            + AA RQVF    + Y    E   +  L   F   +L++KE +  L ++  YR  F  P 
Sbjct: 706  IKAAYRQVFERDIDPYTIGREFYSIETL---FYAGSLSVKEFIEHLGQSELYRKEFFEPY 762

Query: 268  STYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP- 438
               +++EL  KH LGR P  Q E+  + Q L S G  + + +   + EY  +FGD++VP 
Sbjct: 763  PNTKVIELGTKHFLGRAPKDQGEIRLYNQILRSQGLKSFVKSLINSQEYIEIFGDSIVPY 822

Query: 439  ---STVFRGTYRSSE 474
                T+  GT+ +++
Sbjct: 823  RRFPTLPAGTFPNTD 837

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LS  + +  + AA RQVF    + +  +  +  + S+ +   ++MKE +R L K++ Y
Sbjct: 259 PNLSVEEKNEIIRAAYRQVFERD-IVKAYSLSLTKMESRVKIGQISMKEFIRALGKSSLY 317

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRG-PTQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSL 417
           R  F    S  R+VEL ++H LGRG  +  E   +   +   G    +DT   + EY   
Sbjct: 318 RKEFFDSFSNSRVVELAFRHFLGRGISSLEEFQKYFAIVSQEGLGGLVDTLINSKEYSDY 377

Query: 418 FGDNVVP 438
           FG+  VP
Sbjct: 378 FGEETVP 384

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
 Frame = +1

Query: 97  VAAAIRQVFG-NAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNST 273
           + A   +VFG N Y   EE   +  + +QFR + +++KEL+R L+K+  +R  + TP   
Sbjct: 509 IRACYLRVFGRNPYT--EEKLILQPIENQFRDKCISIKELIRALSKSNLFRKLYWTPFYV 566

Query: 274 YRLVELNYKHLLGRGPT--QAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVPST 444
            + +E  +  LLGR PT  + E++ +       G+   ID    + EY  +FGDN++P  
Sbjct: 567 CKSIEYIHIRLLGR-PTYGRKEINNYFNISAQGGFYKLIDAIIDSEEYSQVFGDNIIPYE 625

Query: 445 VFRGTYRSS 471
            +   Y  S
Sbjct: 626 RYLTPYNLS 634

[235][TOP]
>UniRef100_P28035 Phycobilisome linker polypeptide n=2 Tax=Synechococcus elongatus
           RepID=APCE_SYNP6
          Length = 705

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
 Frame = +1

Query: 70  LSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRS 249
           LS  + + A+ AA RQVF    +    +  V+ L S+ +   ++ KE +R L K+  YR 
Sbjct: 279 LSTVEKNEAIKAAYRQVFERD-ITRAYSQKVSDLESKVKNGEISTKEFIRRLGKSPLYRQ 337

Query: 250 RFMTPNSTYRLVELNYKHLLGRGPTQAEVSAHTQTLMSA-GYDADIDTYFGA-EYDSLFG 423
           +F       R++EL ++H LGRG + AE       L+SA G+ A ID    + EY   FG
Sbjct: 338 QFHDRFVNSRVIELAFRHFLGRGISSAEEFTRYFDLLSAKGFAALIDALVDSQEYADYFG 397

Query: 424 DNVVPSTVFRGTYRSSEE 477
           +  VP    RG  + ++E
Sbjct: 398 EETVP--YLRGLGQEAQE 413

[236][TOP]
>UniRef100_A5GV80 Anchor polypeptide LCM n=1 Tax=Synechococcus sp. RCC307
           RepID=A5GV80_SYNR3
          Length = 953

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LS  +    + AA RQVF          A   V  SQ     ++M+E +R L ++  Y
Sbjct: 280 PNLSGVEKAEIIRAAYRQVFQRDIAKAYSQAPCPVEASQVAQGQISMREFIRALGRSKEY 339

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGPTQAEVSAHTQTLMSA-GYDADIDTYFGA-EYDSL 417
           R +F +  +  R VEL ++H LGRG +  E      +++SA G +  +D+   + EY  +
Sbjct: 340 RQQFFSRFANTRAVELAFRHFLGRGVSSLEEFRKYFSIVSAQGLNGLVDSLVNSMEYARV 399

Query: 418 FGDNVVP 438
           FG+  VP
Sbjct: 400 FGEETVP 406

[237][TOP]
>UniRef100_Q9TLS6 Phycobilisome linker polypeptide n=1 Tax=Cyanidium caldarium
           RepID=APCE_CYACA
          Length = 870

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LS  +    + A  RQVF    + +     +  L S+ +   +++KE +R L K+  Y
Sbjct: 265 PNLSNTEKAQVIKACYRQVFERD-IAKAYGLSLLELESKLKNLQISVKEFIRALGKSTLY 323

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRG-PTQAEVSAHTQTLMSAGYDADIDTYF-GAEYDSL 417
           R  F    +  R+VEL ++H +GRG  +  E   +   L S G DA ID+    +EY   
Sbjct: 324 RKNFYEGFTNSRVVELAFRHFMGRGLSSLQEFRKYFAILSSNGLDALIDSIINNSEYAEY 383

Query: 418 FGDNVVPSTVFRGTYRSSEE 477
           FG+  VP    RG  + ++E
Sbjct: 384 FGEETVP--YIRGYGQEAQE 401

 Score = 57.0 bits (136), Expect = 9e-07
 Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
 Frame = +1

Query: 103  AAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRL 282
            AA+RQVF        +  +   + S F    ++++EL++ +  ++ YR  F  P    ++
Sbjct: 716  AALRQVFERNIEPYIKGGEFKDIESLFLSGKISVRELIKEIGSSSLYRKEFYIPFPNTQV 775

Query: 283  VELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
            +E   KH LGR P  Q+E+  + Q L   G    I+    + EY S+FGD++VP
Sbjct: 776  IEFCTKHFLGRAPKNQSEIRYYNQVLAVQGLREMINYMINSKEYLSVFGDDIVP 829

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 40/143 (27%), Positives = 78/143 (54%), Gaps = 14/143 (9%)
 Frame = +1

Query: 103 AAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRL 282
           AA  +VFG  Y++EEE   +  L ++F+ R++++++ V  LAK+  +RS + +     + 
Sbjct: 519 AAYLRVFGR-YVYEEEKIALRPLENEFKRRSISVRDFVGQLAKSDVFRSLYWSRLYICKS 577

Query: 283 VELNYKHLLGRGPT--QAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP----- 438
           +E  +  LLGR PT  + E++ +   +  +G+ A +D+   + EY   FG++ VP     
Sbjct: 578 IEYIHIRLLGR-PTYGRTEINNYFDIVYKSGFYAFVDSLVNSREYIKCFGNDTVPYDRYS 636

Query: 439 ------STVFRGTYRSSEEFNRL 489
                 S++FR ++ +S  +  L
Sbjct: 637 TPEAVSSSIFRLSFINSVSYKSL 659

[238][TOP]
>UniRef100_Q3M8Y6 Phycobilisome linker polypeptide n=1 Tax=Anabaena variabilis ATCC
           29413 RepID=Q3M8Y6_ANAVT
          Length = 253

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
 Frame = +1

Query: 22  RPATYSSVDATIDAPRL-------SAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQ 180
           R A++ + D   D P +       S  D    + A+ RQVF    + +        L SQ
Sbjct: 16  RVASFGAADQNEDTPYIYRIEDVSSYTDIQNIIWASYRQVFSEHEILKFNRQKT--LESQ 73

Query: 181 FRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTL 357
            +  ++++++ +RGLAK+ A+    ++ N+ YRLV++  K LLGR    + E  A +  +
Sbjct: 74  VKNGSISVRDFIRGLAKSEAFYRLVVSVNNNYRLVDITLKRLLGRSSYNKDEQIAWSIVI 133

Query: 358 MSAGYDADIDTYFGA-EYDSLFGDNVVP 438
            + G+   +D    + EY   FG+N+VP
Sbjct: 134 GTKGFSGFVDALIDSEEYTKNFGENIVP 161

[239][TOP]
>UniRef100_Q0I7Q4 Anchor polypeptide LCM n=1 Tax=Synechococcus sp. CC9311
           RepID=Q0I7Q4_SYNS3
          Length = 1202

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 49/163 (30%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
 Frame = +1

Query: 7   PFPCARPATYSSVDATIDAPRLSAWDGDVA-----------------VAAAIRQVFGNAY 135
           P P  R    SSV   +  P + A   + A                 + AA RQVF    
Sbjct: 260 PTPSTRQKLGSSVRQGLQLPAIYALASETAQRFEMRSGLSGAEKAEIIRAAYRQVFERDI 319

Query: 136 LFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGR 315
                     V  SQ     L+M+E +R L K+  YR++F       R+VEL Y+H LGR
Sbjct: 320 AKGYSQTPCEVEASQLVQGKLSMREFIRALGKSKEYRTQFYGRFVNSRVVELAYRHFLGR 379

Query: 316 GPTQAEVSAHTQTLMS-AGYDADIDTYF-GAEYDSLFGDNVVP 438
           G +  E      +++S  G +  +D    GAEY   FG+  VP
Sbjct: 380 GISSLEEFRKAFSIVSNQGLNGLVDVLINGAEYAQTFGEETVP 422

[240][TOP]
>UniRef100_B1WXL5 Phycobilisome rod-core linker polypeptide n=1 Tax=Cyanothece sp.
           ATCC 51142 RepID=B1WXL5_CYAA5
          Length = 250

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
 Frame = +1

Query: 70  LSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRS 249
           LS  D DV + AA RQ+F +A+ ++ E      L SQ R   +T+++ +RGL  +  + +
Sbjct: 37  LSPGDMDVLINAAYRQIFFHAFKWDREP----FLESQLRNGQITVRDFIRGLLLSNTFVT 92

Query: 250 RFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFG 423
            F   NS YR VE   + +LGR   ++ E  A +  + + GY   ID    + EY   FG
Sbjct: 93  SFYEKNSNYRYVEQCVQRVLGRDVYSEQEKIAWSIVVATKGYGGFIDELLNSDEYLDNFG 152

Query: 424 DNVVP 438
            + VP
Sbjct: 153 YDTVP 157

[241][TOP]
>UniRef100_Q112Y6 Phycobilisome linker polypeptide n=1 Tax=Trichodesmium erythraeum
           IMS101 RepID=Q112Y6_TRIEI
          Length = 702

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LS ++    V AA RQVF    +    + +++ L SQ +   ++MKE +R L K+  Y
Sbjct: 278 PGLSNFEKQDVVKAAYRQVFERD-ITRAYSLNISYLESQVKNCEISMKEFIRRLGKSPLY 336

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGPTQAE-----VSAHTQTLMSAGYDADIDTYFGAEY 408
           + +F       R+VEL  +H LGRG +  E         T+  +SA  DA +D+    EY
Sbjct: 337 QKQFYEGFVNSRVVELATRHFLGRGLSSPEEFRKYFDIVTKGGLSALVDAMVDS---QEY 393

Query: 409 DSLFGDNVVPSTVFRGTYRSSEE 477
              FG+  VP    RG  + ++E
Sbjct: 394 SDYFGEETVP--YLRGLGQEAQE 414

[242][TOP]
>UniRef100_P29733 Phycobilisome rod-core linker polypeptide cpcG3 n=1
           Tax=Mastigocladus laminosus RepID=PYG3_MASLA
          Length = 254

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
 Frame = +1

Query: 103 AAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRL 282
           AA RQVF    +          L SQ +   +T+++ +RGLAK+ A+    ++ N+ YRL
Sbjct: 50  AAYRQVFSEHEILRFNRQKH--LESQLKSGLITVRDFIRGLAKSEAFYRLVVSVNNNYRL 107

Query: 283 VELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
           V++  K LLGR    + E  A +  + + G+D  +D    + EY   FGDN VP
Sbjct: 108 VDVVLKRLLGRSAYNKEEEIAWSIVIGTKGFDGFVDAIVDSDEYTQAFGDNTVP 161

[243][TOP]
>UniRef100_Q05238 Phycobilisome rod-core linker polypeptide cpcG n=1
           Tax=Synechococcus sp. PCC 7002 RepID=PYG1_SYNP2
          Length = 248

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
 Frame = +1

Query: 70  LSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRS 249
           +S  D DV + AA RQ+F +A+  + +     +L SQ R   +T+++ +RGL  +  +  
Sbjct: 37  ISDSDFDVLINAAYRQIFFHAFKCDRQQ----LLESQLRNGQITVRDFIRGLLLSETFID 92

Query: 250 RFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFG 423
            F   NS YR VE   + +LGR P ++ E  A +  + + G  A +D      EY   FG
Sbjct: 93  SFYNKNSNYRFVEQCIQRVLGRDPFSEQEKIAWSIVICTKGLAAFVDQLLNTDEYMENFG 152

Query: 424 DNVVP 438
            + VP
Sbjct: 153 YDTVP 157

[244][TOP]
>UniRef100_A0ZKM1 Phycobilisome rod-core linker protein n=1 Tax=Nodularia spumigena
           CCY9414 RepID=A0ZKM1_NODSP
          Length = 255

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
 Frame = +1

Query: 22  RPATYSSVDATIDAPRL-------SAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQ 180
           R A++   D   D P +       S  D    + A+ RQ+F    + +        L SQ
Sbjct: 16  RVASFGVADLNEDTPYIYRIEDVSSYTDIQNIIWASYRQIFSEHEILKFNRQKT--LESQ 73

Query: 181 FRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTL 357
            +  +L++++ +RGLAK+  Y    ++ N+ YRLV++  K +LGR    + E  A +  +
Sbjct: 74  LKTGSLSVRDFIRGLAKSETYYRLVVSSNNNYRLVDITLKRVLGRASYNKDEQIAWSIVI 133

Query: 358 MSAGYDADIDTYFGA-EYDSLFGDNVVP 438
            + G+   +D    + EY   FGDN+VP
Sbjct: 134 GTKGFGGFVDALVDSEEYTQNFGDNIVP 161

[245][TOP]
>UniRef100_B5IMT2 Putative uncharacterized protein cpcG n=1 Tax=Cyanobium sp. PCC
           7001 RepID=B5IMT2_9CHRO
          Length = 250

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
 Frame = +1

Query: 61  APRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAA 240
           AP   A   DV +  A RQ+F +A+  + E     VL SQ R   + M++ +RGL  +  
Sbjct: 36  APVQDAASLDVQIDQAYRQIFFHAFRCDREP----VLESQLRSGQIRMRDFIRGLLLSDK 91

Query: 241 YRSRFMTPNSTYRLVELNYKHLLGRGPTQAEVSAHTQTLMSA--GYDADIDTYFGA-EYD 411
           +R  F   NS YRLVE     +LGR P   +      +++ A  G  A +D   G+ EY 
Sbjct: 92  FRRDFYRCNSNYRLVEQLVGRVLGR-PVYGDQERIAWSILIAEQGLPAFVDALLGSEEYL 150

Query: 412 SLFGDNVVP 438
           + FG+ +VP
Sbjct: 151 ANFGEELVP 159

[246][TOP]
>UniRef100_B4AUL4 Phycobilisome linker polypeptide n=1 Tax=Cyanothece sp. PCC 7822
           RepID=B4AUL4_9CHRO
          Length = 250

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
 Frame = +1

Query: 70  LSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRS 249
           LS  D D  + AA RQ+F +A+ ++ E      L SQ R   +T+++ +RGL  +  YR+
Sbjct: 37  LSPTDMDELIEAAYRQIFFHAFKWDREP----FLESQVRNGQITVRDFIRGLLLSKTYRN 92

Query: 250 RFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFG 423
            F   NS YR VE   + +LGR   ++ E  A +  + + G    +D    + EY   +G
Sbjct: 93  SFYEKNSNYRFVEQCVQRVLGRDVYSEREKIAWSIVVATKGIKGFVDELLNSDEYLENYG 152

Query: 424 DNVVP 438
            + VP
Sbjct: 153 YDTVP 157

[247][TOP]
>UniRef100_A3Z985 Anchor polypeptide LCM n=1 Tax=Synechococcus sp. RS9917
           RepID=A3Z985_9SYNE
          Length = 1012

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
 Frame = +1

Query: 97  VAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAYRSRFMTPNSTY 276
           V AA RQVF          +   V  +Q R  +++M+E +R L ++  YR +F    S  
Sbjct: 296 VRAAYRQVFERDITKAYSQSPCPVEATQVRQGDISMREFIRALGRSKEYRQQFYARFSNS 355

Query: 277 RLVELNYKHLLGRG-PTQAEVSAHTQTLMSAGYDADIDTYFGA-EYDSLFGDNVVP 438
           R VEL ++H LGRG  ++ E + +   + + G +  +D      EY  +FG+  VP
Sbjct: 356 RAVELAFRHFLGRGISSREEFTRYFDIVSAQGLNGLVDALINTMEYARVFGEETVP 411

[248][TOP]
>UniRef100_P29989 Phycobilisome rod-core linker polypeptide cpcG4 n=2 Tax=Nostoc sp.
           PCC 7120 RepID=PYG4_ANASP
          Length = 253

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
 Frame = +1

Query: 22  RPATYSSVDATIDAPRL-------SAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQ 180
           R  ++ + D   D P +       S  D    + A+ RQVF    + +        L SQ
Sbjct: 16  RVTSFGAADQNEDTPYIYRIEDVSSYTDIQNIIWASYRQVFSEHEILKFNRQKT--LESQ 73

Query: 181 FRGRNLTMKELVRGLAKTAAYRSRFMTPNSTYRLVELNYKHLLGRGP-TQAEVSAHTQTL 357
            +  ++++++ +RGLAK+ A+    ++ N+ YRLV++  K LLGR    + E  A +  +
Sbjct: 74  VKNGSISVRDFIRGLAKSEAFYRLVVSVNNNYRLVDITLKRLLGRSSYNKDEQIAWSIVI 133

Query: 358 MSAGYDADIDTYFGA-EYDSLFGDNVVP 438
            + G+   +D    + EY   FG+N+VP
Sbjct: 134 GTKGFSGFVDALIDSEEYTKNFGENIVP 161

[249][TOP]
>UniRef100_Q3AZM9 Anchor polypeptide LCM n=1 Tax=Synechococcus sp. CC9902
           RepID=Q3AZM9_SYNS9
          Length = 972

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 42/127 (33%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LS  +    + AA RQVF             +V  SQ     ++M+E VR L ++  Y
Sbjct: 285 PGLSGAEKAEIIRAAFRQVFERDIAKGYSQNPCSVEASQVVQGQISMREYVRALGRSKEY 344

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGPTQAEVSAHTQTLMSA-GYDADIDTYF-GAEYDSL 417
           R +F       R+VEL Y+H LGRG +  E    +  ++SA G +  +D     AEY   
Sbjct: 345 RQQFHDRFVNSRVVELAYRHFLGRGISSIEEFRKSFAILSAQGLNGLVDVLVNSAEYAQN 404

Query: 418 FGDNVVP 438
           FG+ +VP
Sbjct: 405 FGEEMVP 411

[250][TOP]
>UniRef100_Q064Q4 Anchor polypeptide LCM n=1 Tax=Synechococcus sp. BL107
           RepID=Q064Q4_9SYNE
          Length = 984

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
 Frame = +1

Query: 64  PRLSAWDGDVAVAAAIRQVFGNAYLFEEEAADVAVLTSQFRGRNLTMKELVRGLAKTAAY 243
           P LS  +    + AA RQ+F          +   V  SQ     ++M+E VR L ++  Y
Sbjct: 298 PALSGAEKAEIIRAAYRQIFERDIAKGYSQSPCPVEASQVAQGQISMREFVRALGRSKEY 357

Query: 244 RSRFMTPNSTYRLVELNYKHLLGRGPTQAEVSAHTQTLMSA-GYDADIDTYF-GAEYDSL 417
           R +F       R+VEL Y+H LGRG +  E    +  ++SA G    +D     AEY   
Sbjct: 358 RQQFHDRFVNSRVVELAYRHFLGRGISSIEEFRKSFAIVSAQGLKGLVDVLVNSAEYAQN 417

Query: 418 FGDNVVP 438
           FG+ +VP
Sbjct: 418 FGEEMVP 424