[UP]
[1][TOP] >UniRef100_C8XBK0 Transcriptional regulator, Fis family n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XBK0_9ACTO Length = 245 Score = 58.2 bits (139), Expect = 3e-07 Identities = 52/144 (36%), Positives = 63/144 (43%), Gaps = 28/144 (19%) Frame = -3 Query: 467 PTARPAAQRGPSRHRRRPRRTRRRH-HRGAPRTAPTPCGGWGRGALGR-----TPPRSHG 306 P+ R + GP RPRR +RH R P TA G + GR TP S G Sbjct: 15 PSPRSPERAGPGPRLLRPRRDPQRHPRRRRPTTAAARRSGPAAPSTGRARWLWTPTGSRG 74 Query: 305 ---------PPSRP--GSRRRSCP*-------APSPGRP----GWLPAGRRGGRCRWQWR 192 PPSRP G+ RR P A PG+P G +P+ R GR R R Sbjct: 75 RRAAPSPCLPPSRPPRGTARRPIPSGRPIRASATGPGQPATGRGAVPSRHRPGRRRIGGR 134 Query: 191 RQPGWRQAYPPGGRHQRAGRPRAW 120 R+PG+R + PG R R G R W Sbjct: 135 RRPGYRHPHRPGPR--RPGPHRLW 156 [2][TOP] >UniRef100_C6NW58 Putative ATP-dependent RNA helicase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NW58_9GAMM Length = 386 Score = 55.8 bits (133), Expect = 1e-06 Identities = 42/114 (36%), Positives = 47/114 (41%), Gaps = 10/114 (8%) Frame = -3 Query: 485 RPCRGTPTARPAAQRGPSRHRRRPRRTRRRHHRGAPRTAPTPCGGWGRGALGRTPPRSHG 306 RP RG P + S RR R T RR R R P GG GR P S G Sbjct: 113 RPTRGRSAGSPRRRPTGSTGRRPTRPTGRRPTRPTGRRPTRPTGGRPTRPTGRRPTGSTG 172 Query: 305 P-PSRPGSRRRSCP*APSPGRPGWLPAGRRGGRCRWQWRRQ---------PGWR 174 P+RP RR + P P RP LP R G RW+ RR+ P WR Sbjct: 173 RRPTRPTGRRPTRPTGRRPARPTGLPRRRWGRGTRWRRRRRCHPQRTEKGPRWR 226 [3][TOP] >UniRef100_C4RG10 ATPase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RG10_9ACTO Length = 1011 Score = 55.8 bits (133), Expect = 1e-06 Identities = 49/115 (42%), Positives = 57/115 (49%), Gaps = 2/115 (1%) Frame = -3 Query: 467 PTARPAAQRGPSRHRRRPRRTRRRHHRGAPR--TAPTPCGGWGRGALGRTPPRSHGPPSR 294 P+AR A+RGP R R R RR G PR A P G GR A GR R+H P R Sbjct: 150 PSARRDARRGP-RALRGGGRGDRRGSPGRPRPPAAAGPGGAGGRPAAGRGTRRAH--PPR 206 Query: 293 PGSRRRSCP*APSPGRPGWLPAGRRGGRCRWQWRRQPGWRQAYPPGGRHQRAGRP 129 P RR A R G PA + G R + R+PG R+A G R +RAGRP Sbjct: 207 PAHDRRP---AGDGARRGGGPAAQAGRPAR-RGTRRPGPRRAAGRGRRGRRAGRP 257 [4][TOP] >UniRef100_D0EL85 Truncated bell-like homeodomain protein n=1 Tax=Hordeum vulgare RepID=D0EL85_HORVU Length = 238 Score = 55.5 bits (132), Expect = 2e-06 Identities = 55/163 (33%), Positives = 63/163 (38%), Gaps = 14/163 (8%) Frame = +3 Query: 18 DLAAITPPPTRSAHDRY----------PSDAHRTPPPLEPWH-VQPRSRAP---CSLVAP 155 D AA PPT A PS R PPP P H PR R CS +P Sbjct: 56 DAAAEDSPPTPLARTTSTTRPGRGLPRPSTPTRPPPP--PTHRTAPRCRRASSWCSTGSP 113 Query: 156 SWRVRLPPSRLAAPLPPAATSTPPCGQPPRTSR*WCLRAAAAATARPTWWPV*PRRGATK 335 R SR + + S PP PPR R + A R P PR Sbjct: 114 PSRSPRSSSRTSPRTTSRSPSPPPRPIPPRRPRRPGSSRSREAPGRAVPSPATPR----- 168 Query: 336 CASSPPSAWRRRGAWRAAVVAAARPTRPTAVAGWTSLGCRACS 464 C+ P S+ RRRG WR + ARP PTA + RACS Sbjct: 169 CSGDPSSSSRRRGCWRRSATWEARPRTPTAAS-----RTRACS 206 [5][TOP] >UniRef100_UPI0000F2EC68 PREDICTED: hypothetical protein n=1 Tax=Monodelphis domestica RepID=UPI0000F2EC68 Length = 287 Score = 55.1 bits (131), Expect = 2e-06 Identities = 51/145 (35%), Positives = 59/145 (40%), Gaps = 14/145 (9%) Frame = -3 Query: 485 RPCRGTPTARPAAQ-RGPS------RHRRRPRRTRRRHHRGAPRTAPTPCGGWGRGALG- 330 R C G T P + RG + + PRR RH G P + TP G+ RG Sbjct: 45 RTCSGGGTTAPGRRDRGQALRAAFLSRSKTPRRGGTRHAHGPPTASGTP-PGYRRGRAAP 103 Query: 329 ----RTPPRSHGPPSR--PGSRRRSCP*APSPGRPGWLPAGRRGGRCRWQWRRQPGWRQA 168 RTPP PP R PG+ R P AP+ GRP R R R RR P A Sbjct: 104 EGTHRTPPGRPQPPRRLEPGTGERHRPKAPAVGRPP-PDTQPRSRRARGGHRRPPLTVGA 162 Query: 167 YPPGGRHQRAGRPRAWLHVPWFEGG 93 P R R+G P W WF G Sbjct: 163 ATPPWRPSRSGDPCVWAGA-WFPSG 186 [6][TOP] >UniRef100_UPI0000F2EBF1 PREDICTED: hypothetical protein n=1 Tax=Monodelphis domestica RepID=UPI0000F2EBF1 Length = 287 Score = 55.1 bits (131), Expect = 2e-06 Identities = 51/145 (35%), Positives = 59/145 (40%), Gaps = 14/145 (9%) Frame = -3 Query: 485 RPCRGTPTARPAAQ-RGPS------RHRRRPRRTRRRHHRGAPRTAPTPCGGWGRGALG- 330 R C G T P + RG + + PRR RH G P + TP G+ RG Sbjct: 45 RTCSGGGTTAPGRRDRGQALRAAFLSRSKTPRRGGTRHAHGPPTASGTP-PGYRRGRAAP 103 Query: 329 ----RTPPRSHGPPSR--PGSRRRSCP*APSPGRPGWLPAGRRGGRCRWQWRRQPGWRQA 168 RTPP PP R PG+ R P AP+ GRP R R R RR P A Sbjct: 104 EGTHRTPPGRPQPPRRLEPGTGERHRPKAPAVGRPP-PDTQPRSRRARGGHRRPPLTVGA 162 Query: 167 YPPGGRHQRAGRPRAWLHVPWFEGG 93 P R R+G P W WF G Sbjct: 163 ATPPWRPSRSGDPCVWAGA-WFPSG 186 [7][TOP] >UniRef100_A7HI44 LigA n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HI44_ANADF Length = 535 Score = 54.7 bits (130), Expect = 3e-06 Identities = 46/127 (36%), Positives = 51/127 (40%), Gaps = 15/127 (11%) Frame = -3 Query: 461 ARPAAQRGPSRHRRRPRRTRRRHHRGAPRTAPTPCGGWGRGALGRTPPRSHGPPSRPGSR 282 +R A R P R RR P R R R RGA P G GRGA GR R P R G Sbjct: 3 SRAGADRHPERDRRAPGRRRHRRGRGAAPRGGGPAGPAGRGAAGRLGRRRRRPAGRGGGD 62 Query: 281 RRSCP----*APSPG-----------RPGWLPAGRRGGRCRWQWRRQPGWRQAYPPGGRH 147 RR+ P A + G RP PAG G R G R+ PGG Sbjct: 63 RRARPPRARRAAAAGGAPRAAAADRLRPARRPAGPDGA------ARHAGARRGPRPGGGG 116 Query: 146 QRAGRPR 126 +RA R Sbjct: 117 RRAAGRR 123 [8][TOP] >UniRef100_Q1DG75 Putative uncharacterized protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DG75_MYXXD Length = 513 Score = 53.5 bits (127), Expect = 7e-06 Identities = 44/120 (36%), Positives = 53/120 (44%), Gaps = 4/120 (3%) Frame = -3 Query: 476 RGTPTARPAAQRGPSRHRRRPRRTRRRHHRGAPRTAPTPCGGWGRGALGRTPPRSHGPPS 297 RG P AR A +R P+ HRR P R R R AP P P G +G +G PP + P Sbjct: 40 RGAP-ARHAPRRSPA-HRRTPDRGPRHARRPAPVRGPRPVAGTKQGGVGSLPPPASRPAR 97 Query: 296 RPGSRRRSCP*APSPGRPGWLPAGRRGGRCRWQWRRQPGWRQAYPPGGRH----QRAGRP 129 RRR+ P P P R G P R R R R+ A+ RH +R G P Sbjct: 98 PAAPRRRARPACP-PVRTG--PRSPRVSRSRAAGGRRASGSAAFACAPRHRACLERHGSP 154 [9][TOP] >UniRef100_C4REF4 Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4REF4_9ACTO Length = 341 Score = 53.1 bits (126), Expect = 9e-06 Identities = 49/125 (39%), Positives = 52/125 (41%), Gaps = 12/125 (9%) Frame = -3 Query: 464 TARPAAQRGPSRHRRRPRRTRR------RHHRGAPRTAPTPCGGWGRGALGRTPPRSHGP 303 TA P + R P PR RR RG RT GW R + GR PPR Sbjct: 62 TAWPGSARLPPTGTTSPRPGRRWPGGPTGRRRGGARTGR----GWPRRSPGRRPPRR--- 114 Query: 302 PSRPGSRRRSCP*APSPGRPGWLPAGRRGGR--CRWQWRRQP----GWRQAYPPGGRHQR 141 PSR GSR S P PGWLP R GR RW R P R+A R QR Sbjct: 115 PSRSGSRASSPP-------PGWLPGTTRCGRPPSRWSAPRPPYRRLVERRAQAAELREQR 167 Query: 140 AGRPR 126 AG R Sbjct: 168 AGHER 172