AU190093 ( PF047f12_r )

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[1][TOP]
>UniRef100_Q7XY92 Light-harvest protein (Fragment) n=1 Tax=Griffithsia japonica
           RepID=Q7XY92_GRIJA
          Length = 206

 Score = 73.2 bits (178), Expect = 9e-12
 Identities = 34/61 (55%), Positives = 43/61 (70%)
 Frame = +2

Query: 302 APTAFVGCRLAAPAAPVAARWTMVKSKAIPFMEAPPALDGSMIGDVGFDPLGFSNYIDLK 481
           A TAF G  ++  AAP  AR++M  S ++PF+E PP LDGS+ GDVGFDP GFSN  +L 
Sbjct: 5   ARTAFAGAAVSRAAAPAKARFSMDASASVPFLERPPKLDGSLPGDVGFDPCGFSNAFELN 64

Query: 482 F 484
           F
Sbjct: 65  F 65

[2][TOP]
>UniRef100_Q9FEM1 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
           RepID=Q9FEM1_GALSU
          Length = 227

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 27/37 (72%), Positives = 36/37 (97%)
 Frame = +2

Query: 374 KSKAIPFMEAPPALDGSMIGDVGFDPLGFSNYIDLKF 484
           +S+AIPF++APP+LDGSM+GDVGFDPLGFS+ IDL++
Sbjct: 54  QSRAIPFLKAPPSLDGSMVGDVGFDPLGFSSIIDLRY 90

[3][TOP]
>UniRef100_Q9FEL9 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
           RepID=Q9FEL9_GALSU
          Length = 220

 Score = 64.7 bits (156), Expect = 3e-09
 Identities = 27/37 (72%), Positives = 34/37 (91%)
 Frame = +2

Query: 374 KSKAIPFMEAPPALDGSMIGDVGFDPLGFSNYIDLKF 484
           KSKAIPF++ PPALDGSM+GDVGFDPL  S+Y+DL++
Sbjct: 45  KSKAIPFLDRPPALDGSMVGDVGFDPLNISSYLDLRW 81

[4][TOP]
>UniRef100_Q8RW55 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
           RepID=Q8RW55_GALSU
          Length = 220

 Score = 64.7 bits (156), Expect = 3e-09
 Identities = 27/37 (72%), Positives = 34/37 (91%)
 Frame = +2

Query: 374 KSKAIPFMEAPPALDGSMIGDVGFDPLGFSNYIDLKF 484
           KSKAIPF++ PPALDGSM+GDVGFDPL  S+Y+DL++
Sbjct: 45  KSKAIPFLDRPPALDGSMVGDVGFDPLNISSYLDLRW 81

[5][TOP]
>UniRef100_A8KCN4 Light harvesting complex protein 2 n=1 Tax=Guillardia theta
           RepID=A8KCN4_GUITH
          Length = 215

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
 Frame = +2

Query: 293 ALRAPTAFVGCRLAAPAAPVAARWTMV--KSKAIPFMEAPPALDGSMIGDVGFDPLGFSN 466
           A  + +AF    L   AA  + +   +  +S A+PF+  PPALDG+M GDVGFDPLGFSN
Sbjct: 10  AAASASAFAPAALPTRAARSSTQGLKMQDRSYAVPFLSRPPALDGTMAGDVGFDPLGFSN 69

Query: 467 YIDLKF 484
           Y DLK+
Sbjct: 70  YFDLKW 75

[6][TOP]
>UniRef100_Q5K281 Light harvesting complex protein (Fragment) n=1 Tax=Guillardia
           theta RepID=Q5K281_GUITH
          Length = 235

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 33/73 (45%), Positives = 42/73 (57%)
 Frame = +2

Query: 266 FASAFGGATALRAPTAFVGCRLAAPAAPVAARWTMVKSKAIPFMEAPPALDGSMIGDVGF 445
           FA +FG +       A  G ++ +  +  A      KSKA+PF+  P  LDGSM GDVGF
Sbjct: 12  FAPSFGTSAVSSRSNAITGMKMQSVLSNRAG-----KSKAMPFLSQPEKLDGSMPGDVGF 66

Query: 446 DPLGFSNYIDLKF 484
           DPLG S Y DLK+
Sbjct: 67  DPLGISTYFDLKW 79

[7][TOP]
>UniRef100_A8KCP1 Light harvesting complex protein 4 (Fragment) n=1 Tax=Guillardia
           theta RepID=A8KCP1_GUITH
          Length = 232

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 33/73 (45%), Positives = 42/73 (57%)
 Frame = +2

Query: 266 FASAFGGATALRAPTAFVGCRLAAPAAPVAARWTMVKSKAIPFMEAPPALDGSMIGDVGF 445
           FA +FG +       A  G ++ +  +  A      KSKA+PF+  P  LDGSM GDVGF
Sbjct: 9   FAPSFGTSAVSSRSNAITGMKMQSVLSNRAG-----KSKAMPFLSQPEKLDGSMPGDVGF 63

Query: 446 DPLGFSNYIDLKF 484
           DPLG S Y DLK+
Sbjct: 64  DPLGISTYFDLKW 76

[8][TOP]
>UniRef100_P93450 Light-harvesting complex I polypeptide n=1 Tax=Porphyridium
           purpureum RepID=P93450_PORCR
          Length = 203

 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 26/39 (66%), Positives = 33/39 (84%)
 Frame = +2

Query: 368 MVKSKAIPFMEAPPALDGSMIGDVGFDPLGFSNYIDLKF 484
           M KSKAIPF+EAP  LDG+++GDVGFDPLG S  +D+K+
Sbjct: 30  MAKSKAIPFLEAPAKLDGTLVGDVGFDPLGLSATLDVKY 68

[9][TOP]
>UniRef100_A8KCR3 Light harvesting complex protein 9 n=1 Tax=Guillardia theta
           RepID=A8KCR3_GUITH
          Length = 220

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 13/76 (17%)
 Frame = +2

Query: 296 LRAPTAFVGCRLAA------PAAPVAARWTMVK-------SKAIPFMEAPPALDGSMIGD 436
           LRA  AF  C  A+      P+A V A+ + V        S+++PF+  P ALDG M+GD
Sbjct: 2   LRAVIAFAACAAASAFAPTLPSAGVRAKTSAVSGMKMQQMSQSVPFLPRPAALDGKMVGD 61

Query: 437 VGFDPLGFSNYIDLKF 484
           VGFDP GFS+  D+K+
Sbjct: 62  VGFDPFGFSSKYDIKW 77

[10][TOP]
>UniRef100_P93449 Light-harvesting complex I polypeptide n=1 Tax=Porphyridium
           purpureum RepID=P93449_PORCR
          Length = 222

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 35/75 (46%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
 Frame = +2

Query: 266 FASAFGGATALRAPTAFVGCRLAAPAAPVAARWTMVK--SKAIPFMEAPPALDGSMIGDV 439
           F S   GA  +    A     + A     A R  M+   SK+IPF+E P  LDGSM GDV
Sbjct: 5   FVSGGRGAGPVDKVAAIQSKSVKAAVPVKAGRIAMMAEMSKSIPFLEKPKNLDGSMAGDV 64

Query: 440 GFDPLGFSNYIDLKF 484
           GFDPLGFS+  D+KF
Sbjct: 65  GFDPLGFSDKWDVKF 79

[11][TOP]
>UniRef100_Q5K286 Light harvesting protein 2 (Fragment) n=1 Tax=Guillardia theta
           RepID=Q5K286_GUITH
          Length = 244

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 34/73 (46%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
 Frame = +2

Query: 269 ASAFGGATA--LRAPTAFVGCRLAAPAAPVAARWTMVKSKAIPFMEAPPALDGSMIGDVG 442
           A+AF  A A  L AP A    R A    P  A +    S+++PF++ P  LDGS+ GDVG
Sbjct: 6   AAAFAPAPAGRLSAPAA---SRAAISRGPRMAVFEGSFSESVPFLKQPTNLDGSLPGDVG 62

Query: 443 FDPLGFSNYIDLK 481
           FDPLGFS   D+K
Sbjct: 63  FDPLGFSEVFDVK 75

[12][TOP]
>UniRef100_A8KCR0 Light harvesting complex protein 8 (Fragment) n=1 Tax=Guillardia
           theta RepID=A8KCR0_GUITH
          Length = 222

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 22/31 (70%), Positives = 28/31 (90%)
 Frame = +2

Query: 392 FMEAPPALDGSMIGDVGFDPLGFSNYIDLKF 484
           F+E PPALDG+ +GDVGFDPLGFSN ID+++
Sbjct: 56  FLERPPALDGTWVGDVGFDPLGFSNIIDMRW 86

[13][TOP]
>UniRef100_A8KCP5 Light harvesting complex protein 5 n=1 Tax=Guillardia theta
           RepID=A8KCP5_GUITH
          Length = 235

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 34/73 (46%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
 Frame = +2

Query: 269 ASAFGGATA--LRAPTAFVGCRLAAPAAPVAARWTMVKSKAIPFMEAPPALDGSMIGDVG 442
           A+AF  A A  L AP A    R A    P  A +    S+++PF++ P  LDGS+ GDVG
Sbjct: 14  AAAFAPAPAGRLSAPAA---SRAAISRGPRMAVFEGSFSESVPFLKQPTNLDGSLPGDVG 70

Query: 443 FDPLGFSNYIDLK 481
           FDPLGFS   D+K
Sbjct: 71  FDPLGFSEVFDVK 83

[14][TOP]
>UniRef100_B5YM80 Fucoxanthin chlorophyll a/c light-harvesting protein n=1
           Tax=Thalassiosira pseudonana CCMP1335 RepID=B5YM80_THAPS
          Length = 252

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
 Frame = +2

Query: 251 LKMLGFASAFGG------ATALRAPTAFVGCRLAAP---AAPVAARWTMVKSKAIPFMEA 403
           L +L  ASAF        ++ALR         +A P   AAPVAA      S A+PFM  
Sbjct: 7   LSLLASASAFTTPMQTMPSSALRMSEPSTAEEVAEPVVVAAPVAAA-APAMSTALPFMAR 65

Query: 404 PPALDGSMIGDVGFDPLGFS 463
           P ALDGS+ GDVGFDP+GF+
Sbjct: 66  PVALDGSLAGDVGFDPIGFA 85

[15][TOP]
>UniRef100_B9IJA3 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IJA3_POPTR
          Length = 116

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 35/91 (38%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
 Frame = +3

Query: 12  RGWLCVPPKAAQPTRQRPALRPSAAIETACVRTIP------PPPPLPP-PSASTAVVLPV 170
           R  L +PP  A P   +P L P  +I T    T+P      P P LPP PS  T + LP 
Sbjct: 24  RQLLQLPPLPAIPNLPKPTLPPMPSIPTLPQPTLPTAQPSLPKPTLPPLPSLPTMLSLPK 83

Query: 171 LFSPASPSRPFLPYVP----LPRFSFVSPPP 251
           +  P  PS P +P +P    +P   F+SPPP
Sbjct: 84  VTLPPLPSMPSMPTIPIPTTIPSIPFLSPPP 114

[16][TOP]
>UniRef100_Q9XG28 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
           RepID=Q9XG28_GALSU
          Length = 302

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +2

Query: 377 SKAIPFMEAPPALDGSMIGDVGFDPLGFSNYIDLKF 484
           SKA+PFM  P  LDG+M GDVGFDPLGF+N  D+K+
Sbjct: 128 SKALPFMLWPKNLDGTMAGDVGFDPLGFTNVFDVKW 163

[17][TOP]
>UniRef100_Q9M441 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
           RepID=Q9M441_GALSU
          Length = 302

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +2

Query: 377 SKAIPFMEAPPALDGSMIGDVGFDPLGFSNYIDLKF 484
           SKA+PFM  P  LDG+M GDVGFDPLGF+N  D+K+
Sbjct: 128 SKALPFMLWPKNLDGTMAGDVGFDPLGFTNVFDVKW 163

[18][TOP]
>UniRef100_A8KCQ1 Light harvesting complex protein 6 n=1 Tax=Guillardia theta
           RepID=A8KCQ1_GUITH
          Length = 218

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 28/72 (38%), Positives = 40/72 (55%)
 Frame = +2

Query: 269 ASAFGGATALRAPTAFVGCRLAAPAAPVAARWTMVKSKAIPFMEAPPALDGSMIGDVGFD 448
           A+AF  +  L  P++        P            SK+IPF++ P ALDG++ GDVGFD
Sbjct: 14  ATAFSPSAPLTRPSSSRNVAAVGPRM-------QAMSKSIPFLKKPAALDGTLAGDVGFD 66

Query: 449 PLGFSNYIDLKF 484
           PLG S+  D++F
Sbjct: 67  PLGLSSVADVRF 78

[19][TOP]
>UniRef100_A8KCN9 Light harvesting complex protein 3 n=1 Tax=Guillardia theta
           RepID=A8KCN9_GUITH
          Length = 218

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 33/73 (45%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
 Frame = +2

Query: 275 AFGGATALRAPTAF---VGCRLAAPAAPVAARWTMVKSKAIPFMEAPPALDGSMIGDVGF 445
           A  G +A  AP A     G R A    P   +     S+AIPF+E P  LD SM G  GF
Sbjct: 9   AAAGVSAAFAPAALPVNAGSRAAIARGPRMQQM----SEAIPFLEKPKKLDSSMPGYAGF 64

Query: 446 DPLGFSNYIDLKF 484
           DPLGFS+Y D+K+
Sbjct: 65  DPLGFSDYYDVKW 77

[20][TOP]
>UniRef100_A8KCR8 Light harvesting complex protein 10 n=1 Tax=Guillardia theta
           RepID=A8KCR8_GUITH
          Length = 257

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 27/62 (43%), Positives = 37/62 (59%)
 Frame = +2

Query: 287 ATALRAPTAFVGCRLAAPAAPVAARWTMVKSKAIPFMEAPPALDGSMIGDVGFDPLGFSN 466
           ATA  A  A       A +  +++     +SK +P++EAPPALDG M GDVGFDPL  S+
Sbjct: 14  ATAFLAGPALPSAHAPARSNAISSMSMQARSKPLPWLEAPPALDGKMEGDVGFDPLWVSS 73

Query: 467 YI 472
            +
Sbjct: 74  ML 75

[21][TOP]
>UniRef100_B9IJ95 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IJ95_POPTR
          Length = 116

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 35/91 (38%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
 Frame = +3

Query: 12  RGWLCVPPKAAQPTRQRPALRPSAAIETACVRTIP------PPPPLPP-PSASTAVVLPV 170
           R  L +PP  A P   +P L P  +I T    T+P      P P LPP PS  T   LP 
Sbjct: 24  RQLLQLPPLPAVPNLPKPTLPPMPSIPTLPQPTLPTAQPSLPKPTLPPLPSLPTMPSLPK 83

Query: 171 LFSPASPSRPFLPYVP----LPRFSFVSPPP 251
           +  P  PS P +P +P    +P   F+SPPP
Sbjct: 84  VTLPPLPSMPSMPTIPIPTTIPSIPFLSPPP 114

[22][TOP]
>UniRef100_Q5K258 Lhc7 protein (Fragment) n=1 Tax=Guillardia theta RepID=Q5K258_GUITH
          Length = 176

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 22/36 (61%), Positives = 30/36 (83%)
 Frame = +2

Query: 377 SKAIPFMEAPPALDGSMIGDVGFDPLGFSNYIDLKF 484
           SK+IPF++ P ALDG++ GDVGFDPLG S+  D++F
Sbjct: 1   SKSIPFLKKPAALDGTLAGDVGFDPLGLSSVADVRF 36