AU188630 ( PF028e06_r )

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[1][TOP]
>UniRef100_Q7XYZ7 Phycoerythrin 31 kDa gamma subunit (Fragment) n=1 Tax=Griffithsia
           japonica RepID=Q7XYZ7_GRIJA
          Length = 210

 Score = 81.3 bits (199), Expect = 4e-14
 Identities = 52/138 (37%), Positives = 74/138 (53%), Gaps = 6/138 (4%)
 Frame = +1

Query: 127 VTVYDAQKSSFVSTSPAPAAAAATTPAGPTMLLSARVRK-VSGGFSTKGG-----SYAQI 288
           +TV      S   TSP PA   +   A PTM+L   +R  +S G +T  G     + A I
Sbjct: 1   LTVAKPAVGSSAFTSPLPAHTESAPSAAPTMVLRTTLRSPMSSGSATVFGYVGKANIASI 60

Query: 289 ASKSDKYLAQTITQQYKKTAAAGGVYNVQCTEGSVAGMADYKRVAAKTRAFRDLQKTASQ 468
            SK+D Y+A ++ +QY   +   GV+NVQCTEGSV   AD+ RV A    +R    +AS+
Sbjct: 61  LSKADAYMAMSVRKQYLAKSNPFGVFNVQCTEGSVKFAADFSRVRALNLNYRTQAYSASK 120

Query: 469 KYGDLYAMRAVSIQVAHG 522
           K  D++  R  +I  +HG
Sbjct: 121 KTMDMFESRKSAIANSHG 138

[2][TOP]
>UniRef100_P92928 Gamma 31 kDa subunit of phycoerythrin n=1 Tax=Aglaothamnion
           neglectum RepID=P92928_AGLNE
          Length = 280

 Score = 73.9 bits (180), Expect = 6e-12
 Identities = 43/118 (36%), Positives = 63/118 (53%)
 Frame = +1

Query: 169 SPAPAAAAATTPAGPTMLLSARVRKVSGGFSTKGGSYAQIASKSDKYLAQTITQQYKKTA 348
           +P    +AA   + PTM+L   +R     FS  G +Y+ I SK+D Y+AQ + +QY   A
Sbjct: 26  TPLANRSAAVKSSAPTMVLRTSLRAPIETFSVYG-TYSSIMSKADTYMAQCVKKQYLAMA 84

Query: 349 AAGGVYNVQCTEGSVAGMADYKRVAAKTRAFRDLQKTASQKYGDLYAMRAVSIQVAHG 522
              G + VQCTEGSV   A+  RV + +  +R    + S+   D+Y  R  +I  AHG
Sbjct: 85  NPMGTFGVQCTEGSVKFAAEVARVRSLSADYRQKMSSPSKAAFDMYENRKAAIVAAHG 142

[3][TOP]
>UniRef100_P83592 R-phycoerythrin gamma chain, chloroplastic n=1 Tax=Corallina
           officinalis RepID=PHEG_COROI
          Length = 319

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 32/81 (39%), Positives = 47/81 (58%)
 Frame = +1

Query: 280 AQIASKSDKYLAQTITQQYKKTAAAGGVYNVQCTEGSVAGMADYKRVAAKTRAFRDLQKT 459
           ++I  K D+Y A+ + Q +K+ A   GVY  +CTEG+VAG A  KRV  +T AFR  QK 
Sbjct: 103 SKILMKYDEYCAKGVLQVFKRNAVPFGVYTTKCTEGTVAGQAQEKRVFNRTMAFRQAQKP 162

Query: 460 ASQKYGDLYAMRAVSIQVAHG 522
            + +  + Y  R     +A+G
Sbjct: 163 VNVRLAEQYEARRKCFILANG 183

[4][TOP]
>UniRef100_Q7XZS8 R-phycoerythrin gamma subunit n=1 Tax=Corallina officinalis
           RepID=Q7XZS8_COROI
          Length = 319

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 32/81 (39%), Positives = 47/81 (58%)
 Frame = +1

Query: 280 AQIASKSDKYLAQTITQQYKKTAAAGGVYNVQCTEGSVAGMADYKRVAAKTRAFRDLQKT 459
           ++I  K D+Y A+ + Q +K+ A   GVY  +CTEG+VAG A  KRV  +T AFR  QK 
Sbjct: 103 SKILMKYDEYCAKGMLQVFKRNAVPFGVYTTKCTEGTVAGQAQEKRVFNRTMAFRQAQKP 162

Query: 460 ASQKYGDLYAMRAVSIQVAHG 522
            + +  + Y  R     +A+G
Sbjct: 163 VNVRLAEQYEARRKCFILANG 183

[5][TOP]
>UniRef100_Q3JG96 Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei
           1710b RepID=Q3JG96_BURP1
          Length = 687

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 52/132 (39%), Positives = 56/132 (42%), Gaps = 8/132 (6%)
 Frame = +2

Query: 149 RAPLCRPPRRPRRRRRPPPLARRC-----CSPPASARSAAGSRPRVAAMRRLRPRAISIW 313
           R P C   RR   RRR  PLAR         P A  RS A +  R  A RR RP A    
Sbjct: 556 RPPPCARSRRRSPRRRASPLARSARRPHRARPRACRRSRARADRRSRAQRRCRPTAAR-- 613

Query: 314 PRRSRSSTRRLLRLVVCTTCSARRALSRAWPTTSALPPRPEPSGTCRRPRARST---XTS 484
             R+RS TRR  R   C     R A +RA    SA   R     T RRP  R T     S
Sbjct: 614 -ARARSGTRRRTRRARCRDRRPRAATARAGRRASA--SRRTRRCTARRPMRRHTRRRAAS 670

Query: 485 TRCARCPSRSRT 520
            RC  C  RSR+
Sbjct: 671 CRCPWCAGRSRS 682

[6][TOP]
>UniRef100_P34784 R-phycoerythrin gamma chain, chloroplastic n=1 Tax=Aglaothamnion
           neglectum RepID=PHEG_AGLNE
          Length = 317

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 32/85 (37%), Positives = 45/85 (52%)
 Frame = +1

Query: 265 KGGSYAQIASKSDKYLAQTITQQYKKTAAAGGVYNVQCTEGSVAGMADYKRVAAKTRAFR 444
           K G  A+I  K D+Y A+ + Q  K+ A   GVY  +CTEG+   MA   RV  +T+AFR
Sbjct: 96  KAGGAAKILMKYDEYCAKGMLQVGKRAACRTGVYTTKCTEGTQPQMAFDVRVFNRTQAFR 155

Query: 445 DLQKTASQKYGDLYAMRAVSIQVAH 519
             QK  + +  + Y  R     +AH
Sbjct: 156 QAQKPVAARLREQYEARKACFVLAH 180

[7][TOP]
>UniRef100_A8MSW5 Putative uncharacterized protein TNRC18 n=1 Tax=Homo sapiens
            RepID=A8MSW5_HUMAN
          Length = 1308

 Score = 57.0 bits (136), Expect = 8e-07
 Identities = 57/168 (33%), Positives = 67/168 (39%), Gaps = 25/168 (14%)
 Frame = +2

Query: 32   PASPDFHPLSSIFPATTPPWPSCLPCPSGPPV*PSMMPRRAPLCRPPRRPRRRRRPPPLA 211
            P  P   P     P   PP P   P P  PP+ P  +P R P   PP  PR    PPP  
Sbjct: 1120 PGRPHRPPPPPPHPPPPPPPPPHPPLPP-PPLPPPPLPLRLPPLPPPPLPRPHPPPPPPL 1178

Query: 212  RRCCSPPASARSAAGSR-------PRVAAMRRLR-------------PRAISIWPRRSRS 331
                 PP   R+   +R       PR+A  RR R             PR      RR R 
Sbjct: 1179 PPLL-PPPQTRTLPAARTMRQPPPPRLALPRRRRSPPRPPSRPARRGPRPTPQARRRPRP 1237

Query: 332  STRRLLRLVVCTTCSAR-----RALSRAWPTTSALPPRPEPSGTCRRP 460
            S RRLLR    + CS R     RA  R    +++ PPR  PSG+  RP
Sbjct: 1238 SPRRLLR-SPHSLCSPRLRPGPRADPRRERASTSPPPRSWPSGSACRP 1284

[8][TOP]
>UniRef100_A4H484 Microtubule-associated protein, putative (Fragment) n=1
            Tax=Leishmania braziliensis RepID=A4H484_LEIBR
          Length = 1903

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 56/193 (29%), Positives = 74/193 (38%), Gaps = 24/193 (12%)
 Frame = +2

Query: 11   TRKPRAFPAS---PDFHPLSSIFPATT-------------PPW-PSCLPCPSGPPV*PSM 139
            TR+P   PA    P   P  S  P  T             PPW P+C P P+G P   + 
Sbjct: 823  TRRPPWTPACTTRPAGTPTRSTTPTRTSGRCRRTKSATRRPPWTPACTPRPAGTPTRSTT 882

Query: 140  MPRRAPLCRPPRRPRRRRRPPPLARRCCSPPASARS-------AAGSRPRVAAMRRLRPR 298
            + R +  C   RR +   R PP    C   PA   +        +G   R  +  R  P 
Sbjct: 883  LTRTSGRC---RRTKSATRRPPWTPACTPRPAGTPTRSTTLTRTSGRCRRTKSATRRPPW 939

Query: 299  AISIWPRRSRSSTRRLLRLVVCTTCSARRALSRAWPTTSALPPRPEPSGTCRRPRARSTX 478
              +  PR + + TR          C   ++ +R  P T A  PR  P+GT  R     T 
Sbjct: 940  TPACTPRPAGTPTRSTTLTRTSGRCRRTKSATRRPPWTPACTPR--PAGTPTR-STTPTR 996

Query: 479  TSTRCARCPSRSR 517
            TS RC R  S +R
Sbjct: 997  TSGRCRRTKSATR 1009

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 49/153 (32%), Positives = 65/153 (42%), Gaps = 7/153 (4%)
 Frame = +2

Query: 83   PPW-PSCLPCPSGPPV*PSMMPRRAPLCRPPRRPRRRRRPPPLARRCCSPPASARSAAGS 259
            PPW P+C P P+G P   + + R +  CR  +   RR   PP    C   PA      G+
Sbjct: 900  PPWTPACTPRPAGTPTRSTTLTRTSGRCRRTKSATRR---PPWTPACTPRPA------GT 950

Query: 260  RPRVAAMRRLRPRAISIWPRRSRSSTRRLLRLVVCTTCSARRALSRAWPTTSALPPRPEP 439
              R   + R   R      RR++S+TRR      CT   A        PT S  P R   
Sbjct: 951  PTRSTTLTRTSGRC-----RRTKSATRRPPWTPACTPRPA------GTPTRSTTPTR--T 997

Query: 440  SGTCRRPRAR------STXTSTRCARCPSRSRT 520
            SG CRR ++       +   +TR A  P+RS T
Sbjct: 998  SGRCRRTKSATRRPPWTPACTTRPAGTPTRSTT 1030

[9][TOP]
>UniRef100_C9JS29 Putative uncharacterized protein TNRC18 n=1 Tax=Homo sapiens
            RepID=C9JS29_HUMAN
          Length = 1312

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 56/168 (33%), Positives = 68/168 (40%), Gaps = 25/168 (14%)
 Frame = +2

Query: 32   PASPDFHPLSSIFPATTPPWPSCLPCPSGPPV*PSMMPRRAPLCRPPRRPRRRRRPPPLA 211
            P +P     +   P   PP P   P P  PP+ P  +P R P   PP  PR    PPP  
Sbjct: 1120 PRAPALPSEARAPPPPPPPPPPHPPLPP-PPLPPPPLPLRLPPLPPPPLPRPHPPPPPPL 1178

Query: 212  RRCCSPPASARSAAGSR-------PRVAAMRRLR-------------PRAISIWPRRSRS 331
                 PP   R+   +R       PR+A  RR R             PR      RR R 
Sbjct: 1179 PPLL-PPPQTRTLPAARTMRQPPPPRLALPRRRRSPPRPPSRPARRGPRPTPQARRRPRP 1237

Query: 332  STRRLLRLVVCTTCSAR-----RALSRAWPTTSALPPRPEPSGTCRRP 460
            S RRLLR    + CS R     RA  R    +++ PPR  PSG+  RP
Sbjct: 1238 SPRRLLR-SPHSLCSPRLRPGPRADPRRERASTSPPPRSWPSGSACRP 1284

[10][TOP]
>UniRef100_Q6ZQP7 Uncharacterized protein LOC284861 n=1 Tax=Homo sapiens
           RepID=YV021_HUMAN
          Length = 286

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 62/190 (32%), Positives = 79/190 (41%), Gaps = 18/190 (9%)
 Frame = +2

Query: 5   PHTRKP--RAFPASPDFHPLSSIFPATTPPWPSCLPCPSGPPV*PSMMPRRAPLCRPPRR 178
           P TR P  R  P +P      +  PA TPP  S  P  + P   P+  P RA   R P R
Sbjct: 75  PPTRAPPTRMPPTAPPTRTPPTASPARTPPTES--PARTPPTASPARTPPRASPTRTPPR 132

Query: 179 PRRRRRP--------PPLARRCCSPPASA------RSAAGSRPRVAAMRRLRPRAISIWP 316
              RR P        PP A    +PP ++      R++    P  A+ RR  PRA    P
Sbjct: 133 ASPRRTPSTASPTRTPPRASPRRTPPRASPTRTPPRASPKRTPPRASPRRTPPRAS---P 189

Query: 317 RRS--RSSTRRLLRLVVCTTCSARRALSRAWPTTSALPPRPEPSGTCRRPRARSTXTSTR 490
            R+  R+S +R        T S  R   RA PT +  PP   P+ T  R     T  +  
Sbjct: 190 TRAPPRASPKR-----TPPTASPTRTPPRASPTRT--PPTESPARTPPRASPTRTPPTES 242

Query: 491 CARCPSRSRT 520
            AR PSR+ T
Sbjct: 243 PARTPSRAST 252

[11][TOP]
>UniRef100_UPI0001B7B770 UPI0001B7B770 related cluster n=1 Tax=Rattus norvegicus
           RepID=UPI0001B7B770
          Length = 895

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 47/140 (33%), Positives = 60/140 (42%), Gaps = 4/140 (2%)
 Frame = +2

Query: 110 PSGPPV*PSMMPRRAPLCRPPRRPRRRRRP-PPLARRCCSPPASARSAAGSRPRVAAMRR 286
           PS PP      P  AP   PP  PRRRR P PP  RR  SPP   RS +  R      RR
Sbjct: 562 PSPPPARRRRSPSPAPPPPPPPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRR 621

Query: 287 LRPRAISIWPRRSRSSTRRLLRLVVCTTCSARRALSRAWPTTSALPP---RPEPSGTCRR 457
             P   S  P+R  +S     +     +   +R +S + P     PP   R  PS + + 
Sbjct: 622 YSP---SPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPPVTKRRSPSLSSKH 678

Query: 458 PRARSTXTSTRCARCPSRSR 517
            +  S   STR AR P  ++
Sbjct: 679 RKGSSPGRSTREARSPQPNK 698

[12][TOP]
>UniRef100_UPI0001B7B76F UPI0001B7B76F related cluster n=1 Tax=Rattus norvegicus
           RepID=UPI0001B7B76F
          Length = 922

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 47/140 (33%), Positives = 60/140 (42%), Gaps = 4/140 (2%)
 Frame = +2

Query: 110 PSGPPV*PSMMPRRAPLCRPPRRPRRRRRP-PPLARRCCSPPASARSAAGSRPRVAAMRR 286
           PS PP      P  AP   PP  PRRRR P PP  RR  SPP   RS +  R      RR
Sbjct: 562 PSPPPARRRRSPSPAPPPPPPPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRR 621

Query: 287 LRPRAISIWPRRSRSSTRRLLRLVVCTTCSARRALSRAWPTTSALPP---RPEPSGTCRR 457
             P   S  P+R  +S     +     +   +R +S + P     PP   R  PS + + 
Sbjct: 622 YSP---SPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPPVTKRRSPSLSSKH 678

Query: 458 PRARSTXTSTRCARCPSRSR 517
            +  S   STR AR P  ++
Sbjct: 679 RKGSSPGRSTREARSPQPNK 698

[13][TOP]
>UniRef100_UPI0001B7B76E UPI0001B7B76E related cluster n=1 Tax=Rattus norvegicus
           RepID=UPI0001B7B76E
          Length = 946

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 47/140 (33%), Positives = 60/140 (42%), Gaps = 4/140 (2%)
 Frame = +2

Query: 110 PSGPPV*PSMMPRRAPLCRPPRRPRRRRRP-PPLARRCCSPPASARSAAGSRPRVAAMRR 286
           PS PP      P  AP   PP  PRRRR P PP  RR  SPP   RS +  R      RR
Sbjct: 562 PSPPPARRRRSPSPAPPPPPPPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRR 621

Query: 287 LRPRAISIWPRRSRSSTRRLLRLVVCTTCSARRALSRAWPTTSALPP---RPEPSGTCRR 457
             P   S  P+R  +S     +     +   +R +S + P     PP   R  PS + + 
Sbjct: 622 YSP---SPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPPVTKRRSPSLSSKH 678

Query: 458 PRARSTXTSTRCARCPSRSR 517
            +  S   STR AR P  ++
Sbjct: 679 RKGSSPGRSTREARSPQPNK 698

[14][TOP]
>UniRef100_B2RYB3 Srrm1 protein n=1 Tax=Rattus norvegicus RepID=B2RYB3_RAT
          Length = 908

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 47/140 (33%), Positives = 60/140 (42%), Gaps = 4/140 (2%)
 Frame = +2

Query: 110 PSGPPV*PSMMPRRAPLCRPPRRPRRRRRP-PPLARRCCSPPASARSAAGSRPRVAAMRR 286
           PS PP      P  AP   PP  PRRRR P PP  RR  SPP   RS +  R      RR
Sbjct: 548 PSPPPARRRRSPSPAPPPPPPPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRR 607

Query: 287 LRPRAISIWPRRSRSSTRRLLRLVVCTTCSARRALSRAWPTTSALPP---RPEPSGTCRR 457
             P   S  P+R  +S     +     +   +R +S + P     PP   R  PS + + 
Sbjct: 608 YSP---SPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPPVTKRRSPSLSSKH 664

Query: 458 PRARSTXTSTRCARCPSRSR 517
            +  S   STR AR P  ++
Sbjct: 665 RKGSSPGRSTREARSPQPNK 684

[15][TOP]
>UniRef100_O15417-2 Isoform 2 of Trinucleotide repeat-containing gene 18 protein n=1
            Tax=Homo sapiens RepID=O15417-2
          Length = 1134

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 60/172 (34%), Positives = 70/172 (40%), Gaps = 19/172 (11%)
 Frame = +2

Query: 2    LPHTRKPRAFPASPDFHPLSSIFPATTPPWPSCLPCPSGPPV*---PSMMPRRAPLCRPP 172
            LP   +    P  P  HP     P   PP P  LP    PP+    P   P   PL  PP
Sbjct: 948  LPSEARAPPPPPPPPPHPPLPPPPLPPPPLPLRLPPLPPPPLPRPHPPPPPPLPPLLPPP 1007

Query: 173  RR-----PRRRRRPPP----LARRCCSPPA--SARSAAGSRPRVAAMRRLRPRAISIWPR 319
            +       R  R+PPP    L RR  SPP   S  +  G RP   A RR RP        
Sbjct: 1008 QTRTLPAARTMRQPPPPRLALPRRRRSPPRPPSRPARRGPRPTPQARRRPRP-------- 1059

Query: 320  RSRSSTRRLLRLVVCTTCSAR-----RALSRAWPTTSALPPRPEPSGTCRRP 460
                S RRLLR    + CS R     RA  R    +++ PPR  PSG+  RP
Sbjct: 1060 ----SPRRLLR-SPHSLCSPRLRPGPRADPRRERASTSPPPRSWPSGSACRP 1106

[16][TOP]
>UniRef100_UPI0000DF0802 Os02g0678400 n=1 Tax=Oryza sativa Japonica Group
           RepID=UPI0000DF0802
          Length = 203

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 49/155 (31%), Positives = 58/155 (37%), Gaps = 8/155 (5%)
 Frame = +2

Query: 68  FPATTPPWPSCLPCPSGPPV*PSMMPRR----APLCRPPRRPRRRRRPPPLARRCCS--- 226
           FP + P  P  +         P   PRR    +P   PP  PR RRRP    R   S   
Sbjct: 9   FPLSPPGLPPPIRISPRRAAPPFSAPRRRAWASPPTAPPPPPRSRRRPRSRRRTSSSSTA 68

Query: 227 -PPASARSAAGSRPRVAAMRRLRPRAISIWPRRSRSSTRRLLRLVVCTTCSARRALSRAW 403
            P  S   +A S PR A+     P A    P    +STR         TCS  R    A 
Sbjct: 69  GPGGSGACSASSAPRGASPSPTAPGASRTAPSSRPTSTRSRP-----PTCSMPRGSPAAP 123

Query: 404 PTTSALPPRPEPSGTCRRPRARSTXTSTRCARCPS 508
            +T A P  P PS      R RS  ++   A C S
Sbjct: 124 TSTGARPTAPRPSAPTSAARLRSPTSAAPAASCSS 158

[17][TOP]
>UniRef100_B6KDA1 Putative uncharacterized protein n=1 Tax=Toxoplasma gondii ME49
           RepID=B6KDA1_TOXGO
          Length = 2777

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 3/156 (1%)
 Frame = +2

Query: 5   PHTRKPRAFPASPDFHPLSSIFPA---TTPPWPSCLPCPSGPPV*PSMMPRRAPLCRPPR 175
           PH    ++ P SP   P  S  P+   +  P P   P PS PP+ PS  PR++P   PP 
Sbjct: 374 PHQSPSQSPPNSPSQSPRQSPSPSPPSSPSPSPRQSPSPS-PPMSPSQSPRQSPSPSPPS 432

Query: 176 RPRRRRRPPPLARRCCSPPASARSAAGSRPRVAAMRRLRPRAISIWPRRSRSSTRRLLRL 355
            P    R  P      SP  S R +    PR +  +  R ++ S  PR+S S        
Sbjct: 433 SPSPSPRQSPSPSPPMSPSQSPRQSPSQSPRQSPSQSPR-QSPSESPRQSPSQ------- 484

Query: 356 VVCTTCSARRALSRAWPTTSALPPRPEPSGTCRRPR 463
                 S R++ S++ P + +  PR  P  + R+PR
Sbjct: 485 ------SPRQSPSQSPPKSPSQSPRQSPLESPRQPR 514