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[1][TOP] >UniRef100_Q7XYZ2 Light-harvesting complex I polypeptide (Fragment) n=1 Tax=Griffithsia japonica RepID=Q7XYZ2_GRIJA Length = 168 Score = 146 bits (368), Expect = 1e-33 Identities = 72/121 (59%), Positives = 87/121 (71%) Frame = +3 Query: 180 MKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLV 359 M AS+++PFLE P KLD T+ G GFDPLYLS+Y+D DYAA E+K+GR+ MLA LG LV Sbjct: 3 MAASESVPFLEKPSKLDGTRVGDTGFDPLYLSDYIDLDYAAAAEIKHGRICMLATLGMLV 62 Query: 360 AEVVHLPNKQFSNPVALDAIYQVPVAGWVQILIAISVVELATFKMVYDPKRAAXQLGFDP 539 EVVHLPN FS P L AIY VP+ GWVQI+ I +VELA+FK Y+ LGFDP Sbjct: 63 QEVVHLPNAAFSEPNPLKAIYAVPIEGWVQIITVICLVELASFKATYE---TGADLGFDP 119 Query: 540 L 542 + Sbjct: 120 M 120 [2][TOP] >UniRef100_Q7XY90 Light-harvest protein n=1 Tax=Griffithsia japonica RepID=Q7XY90_GRIJA Length = 213 Score = 124 bits (310), Expect = 6e-27 Identities = 69/165 (41%), Positives = 99/165 (60%), Gaps = 8/165 (4%) Frame = +3 Query: 81 MYAFVAATPVMSRSAFAGSAVSRAP-APVASTMTM-KASKAIPFLEAPEKLDETKAGYAG 254 M AFV P++SRS+ G+++S AP A +T++M + S ++PFL+ PE L +T GY G Sbjct: 1 MNAFVPTLPLLSRSSLGGASLSVAPRASAPATVSMSERSASVPFLKKPENLPDTLIGYTG 60 Query: 255 FDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQVPV 434 FDPL + +D + + E+K+GRV+MLA LG LV E +HLP K F NP+A +A +QVP Sbjct: 61 FDPLNFTGRVDYRWMQEAEIKHGRVSMLAVLGMLVQEFIHLPAKGFENPLATEAFFQVPS 120 Query: 435 AGWVQILIAISVVELATFKMVYDPK------RAAXQLGFDPLKMD 551 AG QI + EL K P +LGF+P+ +D Sbjct: 121 AGLFQIFLFCGFAELYLHKGKLSPSDMFSDGATPGELGFNPMNLD 165 [3][TOP] >UniRef100_P93450 Light-harvesting complex I polypeptide n=1 Tax=Porphyridium purpureum RepID=P93450_PORCR Length = 203 Score = 123 bits (309), Expect = 8e-27 Identities = 79/157 (50%), Positives = 91/157 (57%), Gaps = 3/157 (1%) Frame = +3 Query: 81 MYAFVAATPVMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFD 260 M AFV+ + SA S S+ A M SKAIPFLEAP KLD T G GFD Sbjct: 1 MAAFVSGFGLARASAGRSSVCSKN----AHVTMMAKSKAIPFLEAPAKLDGTLVGDVGFD 56 Query: 261 PLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQ---FSNPVALDAIYQVP 431 PL LS LD Y ELK+GR+AMLA LG++V E+ L KQ F+ P AIY+VP Sbjct: 57 PLGLSATLDVKYLRAAELKHGRIAMLAALGFVVQEI--LAPKQSGPFTEPDPFLAIYKVP 114 Query: 432 VAGWVQILIAISVVELATFKMVYDPKRAAXQLGFDPL 542 V GW QI+ AIS+VEL TFK YD GFDPL Sbjct: 115 VEGWYQIIAAISLVELVTFKENYDGSAEPGNFGFDPL 151 [4][TOP] >UniRef100_Q7X8N6 Light-harvest protein n=1 Tax=Griffithsia japonica RepID=Q7X8N6_GRIJA Length = 217 Score = 117 bits (294), Expect = 4e-25 Identities = 65/159 (40%), Positives = 93/159 (58%), Gaps = 7/159 (4%) Frame = +3 Query: 93 VAATPVMSRSAFAGSAVSRAPAPVASTMTMK-ASKAIPFLEAPEKLDETKAGYAGFDPLY 269 +AA P +SRSA G+AVS A AP S ++M S ++PFL P+ L E GY GFDPL Sbjct: 10 LAARPTLSRSALCGAAVSAAVAPAPSAVSMSDLSPSVPFLPKPKNLSEDMVGYTGFDPLG 69 Query: 270 LSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQVPVAGWVQ 449 LSN +D + + E+K+GRV MLA G L E VHLP+ +++NP+A +A+ QVP A Q Sbjct: 70 LSNLVDIKWLQESEIKHGRVCMLAVAGILAQEFVHLPDPRYANPLATEALNQVPSAALWQ 129 Query: 450 ILIAISVVELATFK------MVYDPKRAAXQLGFDPLKM 548 I + + E K ++ +LGF+P+ + Sbjct: 130 IFLFCGLAEFVLHKGKISYVDMFSDGAVPGELGFNPMNL 168 [5][TOP] >UniRef100_Q9FDZ6 Light-harvesting protein n=1 Tax=Galdieria sulphuraria RepID=Q9FDZ6_GALSU Length = 229 Score = 115 bits (288), Expect = 2e-24 Identities = 60/125 (48%), Positives = 78/125 (62%), Gaps = 7/125 (5%) Frame = +3 Query: 189 SKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEV 368 S ++PFLE P+ LD T G GFDPLY+S+ LD + + E+K+GR+AMLA LG++V E Sbjct: 48 SPSVPFLERPQNLDGTAPGDVGFDPLYISDLLDIQWLRESEIKHGRIAMLAALGFIVQEF 107 Query: 369 VHLPNKQFSNPVALDAIYQVPVAGWVQILIAISVVELATFK-------MVYDPKRAAXQL 527 VHLP + FSN VA+DA +QVP G QI + I ++E K M DP R Sbjct: 108 VHLPGQVFSNKVAVDAFFQVPRGGLWQIFLFIGLLEFVMNKGKMTPLDMFSDPNRKPGDF 167 Query: 528 GFDPL 542 GFDPL Sbjct: 168 GFDPL 172 [6][TOP] >UniRef100_Q9FEM1 Light-harvesting protein n=1 Tax=Galdieria sulphuraria RepID=Q9FEM1_GALSU Length = 227 Score = 114 bits (286), Expect = 4e-24 Identities = 59/129 (45%), Positives = 82/129 (63%), Gaps = 3/129 (2%) Frame = +3 Query: 165 ASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLAC 344 +S+ + + S+AIPFL+AP LD + G GFDPL S+ +D Y + ELK+ R+AMLA Sbjct: 47 SSSTSGRQSRAIPFLKAPPSLDGSMVGDVGFDPLGFSSIIDLRYLRESELKHCRIAMLAV 106 Query: 345 LGWLVAEVVHLPNKQFSNPVALDAIYQVPVAGWVQILIAISVVE---LATFKMVYDPKRA 515 +G++V E +HLP FSNP + AI QVPVAGWVQI + ++++E +A K R Sbjct: 107 VGFIVQEFIHLPGDVFSNPHPMQAIGQVPVAGWVQIFLLVAILEMIDIAAIKETLQGNRE 166 Query: 516 AXQLGFDPL 542 GFDPL Sbjct: 167 PGYFGFDPL 175 [7][TOP] >UniRef100_Q7XY92 Light-harvest protein (Fragment) n=1 Tax=Griffithsia japonica RepID=Q7XY92_GRIJA Length = 206 Score = 114 bits (285), Expect = 5e-24 Identities = 66/148 (44%), Positives = 90/148 (60%), Gaps = 5/148 (3%) Frame = +3 Query: 111 MSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQ 290 ++R+AFAG+AVSRA AP + +M AS ++PFLE P KLD + G GFDP SN + Sbjct: 4 IARTAFAGAAVSRAAAPAKARFSMDASASVPFLERPPKLDGSLPGDVGFDPCGFSNAFEL 63 Query: 291 DYAAQGELKNGRVAMLACLGWLVAEVV-HLPNKQFSNPVALDAIYQVPVAGW---VQILI 458 ++ + ELK+GR+ MLA LGW+ E+V HLPN+ +S A + +Y V GW +QIL Sbjct: 64 NFLREAELKHGRICMLAILGWVFPELVGHLPNEAYS---ATNPLYAVGSVGWLPIIQILA 120 Query: 459 AISVVELATFKMVYDPKRA-AXQLGFDP 539 I++ E VYD A GFDP Sbjct: 121 FIAICEAKGVAKVYDENCANPGNYGFDP 148 [8][TOP] >UniRef100_A8KCN9 Light harvesting complex protein 3 n=1 Tax=Guillardia theta RepID=A8KCN9_GUITH Length = 218 Score = 114 bits (285), Expect = 5e-24 Identities = 62/158 (39%), Positives = 91/158 (57%) Frame = +3 Query: 75 VIMYAFVAATPVMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAG 254 V++ A + + +A +A SRA M + S+AIPFLE P+KLD + GYAG Sbjct: 5 VLLLAAAGVSAAFAPAALPVNAGSRAAIARGPRM-QQMSEAIPFLEKPKKLDSSMPGYAG 63 Query: 255 FDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQVPV 434 FDPL S+Y D + + E+K+GR+ MLA +G E+ LP + L+A YQ+ Sbjct: 64 FDPLGFSDYYDVKWLQEAEIKHGRICMLAVVGMFHPEIAKLPQFASFSTNPLEAFYQLSF 123 Query: 435 AGWVQILIAISVVELATFKMVYDPKRAAXQLGFDPLKM 548 AGW+QI + I + E +F+ VY +A LGFDPL++ Sbjct: 124 AGWLQIFVFIGICESFSFEKVYYTDKAPGDLGFDPLRL 161 [9][TOP] >UniRef100_Q5K269 Light harvesting protein 7 (Fragment) n=1 Tax=Guillardia theta RepID=Q5K269_GUITH Length = 203 Score = 113 bits (283), Expect = 8e-24 Identities = 62/151 (41%), Positives = 90/151 (59%) Frame = +3 Query: 96 AATPVMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLS 275 AA PV +A + +A++R P + S+AIPFLE P+KLD + GYAGFDPL S Sbjct: 5 AALPV---NAGSRAAIARGPR------MQQMSEAIPFLEKPKKLDSSMPGYAGFDPLGFS 55 Query: 276 NYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQVPVAGWVQIL 455 +Y D + + E+K+GR+ MLA +G E+ LP + L+A YQ+ AGW+QI Sbjct: 56 DYYDVKWLQEAEIKHGRICMLAVVGMFHPEIAKLPQFASFSTNPLEAFYQLSFAGWLQIF 115 Query: 456 IAISVVELATFKMVYDPKRAAXQLGFDPLKM 548 + I + E +F+ VY +A LGFDPL++ Sbjct: 116 VFIGICESFSFEKVYYTDKAPGDLGFDPLRL 146 [10][TOP] >UniRef100_A8KCP1 Light harvesting complex protein 4 (Fragment) n=1 Tax=Guillardia theta RepID=A8KCP1_GUITH Length = 232 Score = 111 bits (278), Expect = 3e-23 Identities = 65/160 (40%), Positives = 88/160 (55%), Gaps = 9/160 (5%) Frame = +3 Query: 96 AATPVMSRSAFAGSAVSRAPAPVASTMTMKA--SKAIPFLEAPEKLDETKAGYAGFDPLY 269 A P SA + + + + S ++ +A SKA+PFL PEKLD + G GFDPL Sbjct: 8 AFAPSFGTSAVSSRSNAITGMKMQSVLSNRAGKSKAMPFLSQPEKLDGSMPGDVGFDPLG 67 Query: 270 LSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQVPVAGWVQ 449 +S Y D + + ELK+GR+ MLA G LV EV+HLP + FS +ALDA P G + Sbjct: 68 ISTYFDLKWMREAELKHGRICMLAWTGCLVQEVIHLPGEAFSKKLALDAWASAPRGGMIS 127 Query: 450 ILIAISVVE-------LATFKMVYDPKRAAXQLGFDPLKM 548 IL+AI ++E L M +P R LGFDPL + Sbjct: 128 ILVAIGLIEMISNRFQLTATDMFANPARVPGDLGFDPLSL 167 [11][TOP] >UniRef100_Q9FEM0 Light-harvesting protein n=1 Tax=Galdieria sulphuraria RepID=Q9FEM0_GALSU Length = 219 Score = 110 bits (274), Expect = 9e-23 Identities = 56/126 (44%), Positives = 79/126 (62%), Gaps = 1/126 (0%) Frame = +3 Query: 168 STMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACL 347 S T + SKAIPF PE+LDE+ GYAGFDPL S+ D + + E+K+ R+ MLA L Sbjct: 37 SAETQRMSKAIPFFPKPERLDESMPGYAGFDPLGFSDKFDVKFLQEAEIKHCRICMLAAL 96 Query: 348 GWLVAEVVHLPNKQFSNPVALDAIYQVPVAGWVQILIAISVVE-LATFKMVYDPKRAAXQ 524 GW+ E HLP++ FSN L A+ QVP G +QIL+ + +E ++ K+ + P++ Sbjct: 97 GWVFPEFWHLPSEVFSNTSPLAALGQVPKFGLIQILLLVVALEAISLDKLEFHPEKEPGD 156 Query: 525 LGFDPL 542 GFDPL Sbjct: 157 FGFDPL 162 [12][TOP] >UniRef100_Q5K281 Light harvesting complex protein (Fragment) n=1 Tax=Guillardia theta RepID=Q5K281_GUITH Length = 235 Score = 106 bits (265), Expect = 1e-21 Identities = 63/160 (39%), Positives = 86/160 (53%), Gaps = 9/160 (5%) Frame = +3 Query: 96 AATPVMSRSAFAGSAVSRAPAPVASTMTMKA--SKAIPFLEAPEKLDETKAGYAGFDPLY 269 A P SA + + + + S ++ +A SKA+PFL PEKLD + G GFDPL Sbjct: 11 AFAPSFGTSAVSSRSNAITGMKMQSVLSNRAGKSKAMPFLSQPEKLDGSMPGDVGFDPLG 70 Query: 270 LSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQVPVAGWVQ 449 +S Y D + + ELK+GR+ MLA G LV EV+HLP + +ALDA P G + Sbjct: 71 ISTYFDLKWMREAELKHGRICMLAWTGCLVQEVIHLPESAEAKKLALDAWASAPRGGMIS 130 Query: 450 ILIAISVVE-------LATFKMVYDPKRAAXQLGFDPLKM 548 IL+AI ++E L M +P R LGFDPL + Sbjct: 131 ILVAIGLIEMISNRFQLTATDMFANPARVPGDLGFDPLSL 170 [13][TOP] >UniRef100_A8KCR3 Light harvesting complex protein 9 n=1 Tax=Guillardia theta RepID=A8KCR3_GUITH Length = 220 Score = 100 bits (248), Expect = 9e-20 Identities = 67/165 (40%), Positives = 86/165 (52%), Gaps = 10/165 (6%) Frame = +3 Query: 78 IMYAFVAATPVMSRSAFAG---SAVSRAPAPVASTMTMKA-SKAIPFLEAPEKLDETKAG 245 ++ A +A + SAFA SA RA S M M+ S+++PFL P LD G Sbjct: 1 MLRAVIAFAACAAASAFAPTLPSAGVRAKTSAVSGMKMQQMSQSVPFLPRPAALDGKMVG 60 Query: 246 YAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQ 425 GFDP S+ D + + ELK+GRV MLA LG++V E VHLP + SNPV +A YQ Sbjct: 61 DVGFDPFGFSSKYDIKWLRESELKHGRVCMLASLGYIVQEFVHLPFEATSNPVGSEAFYQ 120 Query: 426 VPVAGWVQILIAISVVE--LATFKM----VYDPKRAAXQLGFDPL 542 VP G QI I +E FKM ++ R GFDPL Sbjct: 121 VPAGGLWQIFAFIGAIEHFSHNFKMSGSTMFSDGRTPGNFGFDPL 165 [14][TOP] >UniRef100_A8KCN4 Light harvesting complex protein 2 n=1 Tax=Guillardia theta RepID=A8KCN4_GUITH Length = 215 Score = 97.8 bits (242), Expect = 5e-19 Identities = 63/166 (37%), Positives = 84/166 (50%), Gaps = 9/166 (5%) Frame = +3 Query: 78 IMYAFVAATPVMSRSAFAGSAVSRAPAPVASTMTMKA---SKAIPFLEAPEKLDETKAGY 248 ++ A + S SAFA +A+ A +ST +K S A+PFL P LD T AG Sbjct: 1 MLRAILVLAAAASASAFAPAALPTRAAR-SSTQGLKMQDRSYAVPFLSRPPALDGTMAGD 59 Query: 249 AGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQV 428 GFDPL SNY D + + ELK+GRV ML LG+LV E LP F + ++A + V Sbjct: 60 VGFDPLGFSNYFDLKWLREAELKHGRVCMLGTLGFLVQEKFQLPLPGFGEKLPIEAFFTV 119 Query: 429 PVAGWVQILIAISVVELATFKMVYDP------KRAAXQLGFDPLKM 548 P G QI + +E+ + P RA LGFDPL + Sbjct: 120 PTGGLWQIFFTLGAIEILSNNGRISPGDMFADGRAPGDLGFDPLNL 165 [15][TOP] >UniRef100_B7FSP4 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FSP4_PHATR Length = 199 Score = 93.2 bits (230), Expect = 1e-17 Identities = 60/155 (38%), Positives = 86/155 (55%), Gaps = 2/155 (1%) Frame = +3 Query: 78 IMYAFVAATPVMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGF 257 +M + + A + S +AFA +++ A S + SK+IPFL P+KLD + AG GF Sbjct: 1 MMRSTILAALLASAAAFAPASMQSQRAGSVSLNAEEMSKSIPFLVKPDKLDGSMAGDMGF 60 Query: 258 DPLYLSN-YLDQDYAAQGELKNGRVAMLACLGWLVAEV-VHLPNKQFSNPVALDAIYQVP 431 DP+ LS+ D YA E+K+GR+ MLA +G LV + +HLP +QF+N A+ V Sbjct: 61 DPMRLSDIQTDLKYARWSEIKHGRICMLAIVGILVQQAGIHLPGEQFTNTDIFGAVDSVG 120 Query: 432 VAGWVQILIAISVVELATFKMVYDPKRAAXQLGFD 536 +QI I VE+ATF Y + LGFD Sbjct: 121 FGANMQIFAGIGAVEIATFNKHYG-EGEPGDLGFD 154 [16][TOP] >UniRef100_Q9FEL9 Light-harvesting protein n=1 Tax=Galdieria sulphuraria RepID=Q9FEL9_GALSU Length = 220 Score = 91.7 bits (226), Expect = 3e-17 Identities = 54/131 (41%), Positives = 75/131 (57%), Gaps = 5/131 (3%) Frame = +3 Query: 165 ASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLAC 344 AS + SKAIPFL+ P LD + G GFDPL +S+YLD + + ELK+ R+AMLA Sbjct: 38 ASASLPQKSKAIPFLDRPPALDGSMVGDVGFDPLNISSYLDLRWLRESELKHCRIAMLAV 97 Query: 345 LGWLVAEVVHLPNKQFSNPVALDAIYQVPVAGWV-QILIAISVVEL----ATFKMVYDPK 509 +GW V EV HLPN+ +S +A ++ G + QI++ S E+ A +M+ Sbjct: 98 VGWFVQEVFHLPNQIYSASDPTEAFWKTLATGPMGQIVLWTSFFEIISTPAVIQMLQGSG 157 Query: 510 RAAXQLGFDPL 542 R GFDPL Sbjct: 158 REPGYFGFDPL 168 [17][TOP] >UniRef100_Q8RW55 Light-harvesting protein n=1 Tax=Galdieria sulphuraria RepID=Q8RW55_GALSU Length = 220 Score = 90.9 bits (224), Expect = 6e-17 Identities = 54/131 (41%), Positives = 74/131 (56%), Gaps = 5/131 (3%) Frame = +3 Query: 165 ASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLAC 344 AS + SKAIPFL+ P LD + G GFDPL +S+YLD + + ELK+ R+AMLA Sbjct: 38 ASASLPQKSKAIPFLDRPPALDGSMVGDVGFDPLNISSYLDLRWLRESELKHCRIAMLAV 97 Query: 345 LGWLVAEVVHLPNKQFSNPVALDAIYQVPVAGWV-QILIAISVVEL----ATFKMVYDPK 509 +GW V EV HLPN +S +A ++ G + QI++ S E+ A +M+ Sbjct: 98 VGWFVQEVFHLPNXIYSASDPTEAFWKTLATGPMGQIVLWTSFFEIISTPAVIQMLQGSG 157 Query: 510 RAAXQLGFDPL 542 R GFDPL Sbjct: 158 REPGYFGFDPL 168 [18][TOP] >UniRef100_P93449 Light-harvesting complex I polypeptide n=1 Tax=Porphyridium purpureum RepID=P93449_PORCR Length = 222 Score = 88.6 bits (218), Expect = 3e-16 Identities = 57/156 (36%), Positives = 83/156 (53%), Gaps = 8/156 (5%) Frame = +3 Query: 99 ATPVMSRSAFAGSAVSRAPAPVASTMTMKA--SKAIPFLEAPEKLDETKAGYAGFDPLYL 272 A PV +A +V A A + M A SK+IPFLE P+ LD + AG GFDPL Sbjct: 12 AGPVDKVAAIQSKSVKAAVPVKAGRIAMMAEMSKSIPFLEKPKNLDGSMAGDVGFDPLGF 71 Query: 273 SNYLDQDYAAQGELKNGRVAMLACLGWLVAEV-----VHLPNKQFSNPVALDAIYQVPVA 437 S+ D + + ELK+GR+ MLA LG++ E+ + P F+ L A+ +P A Sbjct: 72 SDKWDVKFLREAELKHGRICMLAALGFIYPEIMGGKSIPSPEGYFTELNPLKAVKAIPTA 131 Query: 438 GWVQILIAISVVELATFKMVY-DPKRAAXQLGFDPL 542 G +QI++ + V+E ++ V+ D A FDPL Sbjct: 132 GLLQIVLFVMVLEAISWNKVFMDKTSAPGDFKFDPL 167 [19][TOP] >UniRef100_Q2IA66 Chloroplast light harvesting protein isoform 13 n=1 Tax=Isochrysis galbana RepID=Q2IA66_ISOGA Length = 211 Score = 85.9 bits (211), Expect = 2e-15 Identities = 53/126 (42%), Positives = 66/126 (52%), Gaps = 8/126 (6%) Frame = +3 Query: 189 SKAIPFLEAPEKLDETKAGY-AGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAE 365 SKA+PFL AP AG GFDPLYLS Y+D +A + ELK+GR+ MLA G+ E Sbjct: 36 SKAVPFLSAPPCQSSKLAGAETGFDPLYLSEYIDIKWAREAELKHGRICMLAATGYFFQE 95 Query: 366 VVHLPNKQFSNPVALDAIYQVPVAGWVQILIAISVVEL-------ATFKMVYDPKRAAXQ 524 + LP P ++A V QI++ +SVVE M DPKR Sbjct: 96 FLALPGFPGYTPNGIEAATSVSPESLAQIVLFMSVVEYNSNLNKWTQDTMFTDPKREPGN 155 Query: 525 LGFDPL 542 LGFDPL Sbjct: 156 LGFDPL 161 [20][TOP] >UniRef100_B8C2K6 Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C2K6_THAPS Length = 198 Score = 85.5 bits (210), Expect = 2e-15 Identities = 58/144 (40%), Positives = 83/144 (57%), Gaps = 3/144 (2%) Frame = +3 Query: 78 IMYAFVAATPVMSRSAFAGSAVSRAPAPVASTMTM-KASKAIPFLEAPEKLDETKAGYAG 254 ++ A + + + + SAFA ++V R ST+ + + SK+IPFL PEKLD + AG G Sbjct: 1 MLKAVLTTSLIAAASAFAPASVGR------STVALNEMSKSIPFLTVPEKLDGSMAGDVG 54 Query: 255 FDPLYLSN-YLDQDYAAQGELKNGRVAMLACLGWLVAEV-VHLPNKQFSNPVALDAIYQV 428 FDP+ LS+ D +YA ELK+GR+ MLA +G + E HLP ++ +AI V Sbjct: 55 FDPMGLSDIQTDLNYARWAELKHGRICMLAVVGMVWQEYGPHLPGDAYATKDPWEAISSV 114 Query: 429 PVAGWVQILIAISVVELATFKMVY 500 A Q L+AI VVELA + Y Sbjct: 115 GFASNFQTLLAIGVVELANWNKYY 138 [21][TOP] >UniRef100_Q9XG28 Light-harvesting protein n=1 Tax=Galdieria sulphuraria RepID=Q9XG28_GALSU Length = 302 Score = 77.4 bits (189), Expect = 6e-13 Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 5/125 (4%) Frame = +3 Query: 183 KASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVA 362 K SKA+PF+ P+ LD T AG GFDPL +N D + + ELK+ R+AMLA LG++V Sbjct: 126 KWSKALPFMLWPKNLDGTMAGDVGFDPLGFTNVFDVKWMREAELKHCRIAMLAALGFMVQ 185 Query: 363 EVVHLPNKQFSN--PVALDAIYQVPVAGWVQILIAI---SVVELATFKMVYDPKRAAXQL 527 E+ P+ FS PV +Y V G QIL+ + ++ + + + KR Sbjct: 186 ELWTFPHPYFSKVPPVLAHDVY-VKTGGMSQILLFVIFFEIISVFAVSQMMEGKREPGVF 244 Query: 528 GFDPL 542 FDPL Sbjct: 245 HFDPL 249 [22][TOP] >UniRef100_Q9M441 Light-harvesting protein n=1 Tax=Galdieria sulphuraria RepID=Q9M441_GALSU Length = 302 Score = 77.4 bits (189), Expect = 6e-13 Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 5/125 (4%) Frame = +3 Query: 183 KASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVA 362 K SKA+PF+ P+ LD T AG GFDPL +N D + + ELK+ R+AMLA LG++V Sbjct: 126 KWSKALPFMLWPKNLDGTMAGDVGFDPLGFTNVFDVKWMREAELKHCRIAMLAALGFMVQ 185 Query: 363 EVVHLPNKQFSN--PVALDAIYQVPVAGWVQILIAI---SVVELATFKMVYDPKRAAXQL 527 E+ P+ FS PV +Y V G QIL+ + ++ + + + KR Sbjct: 186 ELWTFPHPYFSKVPPVLAHDVY-VKTGGMSQILLFVIFFEIISVFAVSQMMEGKREPGVF 244 Query: 528 GFDPL 542 FDPL Sbjct: 245 HFDPL 249 [23][TOP] >UniRef100_A8KCQ1 Light harvesting complex protein 6 n=1 Tax=Guillardia theta RepID=A8KCQ1_GUITH Length = 218 Score = 77.0 bits (188), Expect = 8e-13 Identities = 62/164 (37%), Positives = 86/164 (52%), Gaps = 8/164 (4%) Frame = +3 Query: 75 VIMYAFVAATPVMSRSA-FAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYA 251 +++ A VAA S SA + SR A V M SK+IPFL+ P LD T AG Sbjct: 5 ILVAACVAAATAFSPSAPLTRPSSSRNVAAVGPRM-QAMSKSIPFLKKPAALDGTLAGDV 63 Query: 252 GFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPN-KQFSNPVALDAIYQV 428 GFDPL LS+ D + A+ ELK+ R+AMLA LG +V ++ P + + ++ + Sbjct: 64 GFDPLGLSSVADVRFLAEAELKHCRLAMLAALGAIVQDIFTFPGVSKVVGSEKMTGVHDI 123 Query: 429 PV--AGWVQILIAISVVE----LATFKMVYDPKRAAXQLGFDPL 542 V QIL+ +S +E LA F+ + D KRA FDPL Sbjct: 124 LVKQGAMGQILLWVSFLEVFGTLALFETL-DGKRAPGDFKFDPL 166 [24][TOP] >UniRef100_O81932 Fucoxanthin chlorophyll a/c protein (Fragment) n=1 Tax=Cyclotella cryptica RepID=O81932_9STRA Length = 164 Score = 75.1 bits (183), Expect = 3e-12 Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 2/104 (1%) Frame = +3 Query: 195 AIPFLEAPEKLDETKAGYAGFDPLYLSN-YLDQDYAAQGELKNGRVAMLACLGWLVAEV- 368 +IPFL PEKLD + G GFDP+ LS+ D +YA ELK+GR+ MLA +G + E Sbjct: 1 SIPFLTVPEKLDGSMPGDMGFDPMGLSDIQTDLNYARWSELKHGRICMLAVVGMVWQEYG 60 Query: 369 VHLPNKQFSNPVALDAIYQVPVAGWVQILIAISVVELATFKMVY 500 HLP ++ +AI V A +Q L+AI VVELA + Y Sbjct: 61 PHLPGDAYATRDPWEAISSVGFASNIQTLLAIGVVELANWNKYY 104 [25][TOP] >UniRef100_Q5K286 Light harvesting protein 2 (Fragment) n=1 Tax=Guillardia theta RepID=Q5K286_GUITH Length = 244 Score = 74.7 bits (182), Expect = 4e-12 Identities = 55/158 (34%), Positives = 74/158 (46%), Gaps = 15/158 (9%) Frame = +3 Query: 114 SRSAFAGSAVSRAPAPVASTMTMKA-----------SKAIPFLEAPEKLDETKAGYAGFD 260 S +AFA + R AP AS + S+++PFL+ P LD + G GFD Sbjct: 5 SAAAFAPAPAGRLSAPAASRAAISRGPRMAVFEGSFSESVPFLKQPTNLDGSLPGDVGFD 64 Query: 261 PLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQVPVAG 440 PL S D + ELK+GR+AMLA LGWLV E P +P+ + V G Sbjct: 65 PLGFSEVFDVKVLREAELKHGRIAMLAVLGWLVQESYTFPFFDKVSPIEAHDLL-VKSGG 123 Query: 441 WVQILIAISVVE----LATFKMVYDPKRAAXQLGFDPL 542 QIL+ S +E +A F+ + R FDPL Sbjct: 124 MSQILLWTSFLEIFGGIALFQTI-QGTRYPGDFSFDPL 160 [26][TOP] >UniRef100_A8KCP5 Light harvesting complex protein 5 n=1 Tax=Guillardia theta RepID=A8KCP5_GUITH Length = 235 Score = 74.7 bits (182), Expect = 4e-12 Identities = 55/158 (34%), Positives = 74/158 (46%), Gaps = 15/158 (9%) Frame = +3 Query: 114 SRSAFAGSAVSRAPAPVASTMTMKA-----------SKAIPFLEAPEKLDETKAGYAGFD 260 S +AFA + R AP AS + S+++PFL+ P LD + G GFD Sbjct: 13 SAAAFAPAPAGRLSAPAASRAAISRGPRMAVFEGSFSESVPFLKQPTNLDGSLPGDVGFD 72 Query: 261 PLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQVPVAG 440 PL S D + ELK+GR+AMLA LGWLV E P +P+ + V G Sbjct: 73 PLGFSEVFDVKVLREAELKHGRIAMLAVLGWLVQESYTFPFFDKVSPIEAHDLL-VKSGG 131 Query: 441 WVQILIAISVVE----LATFKMVYDPKRAAXQLGFDPL 542 QIL+ S +E +A F+ + R FDPL Sbjct: 132 MSQILLWTSFLEIFGGIALFQTI-QGTRYPGDFSFDPL 168 [27][TOP] >UniRef100_Q5K258 Lhc7 protein (Fragment) n=1 Tax=Guillardia theta RepID=Q5K258_GUITH Length = 176 Score = 72.4 bits (176), Expect = 2e-11 Identities = 50/125 (40%), Positives = 70/125 (56%), Gaps = 7/125 (5%) Frame = +3 Query: 189 SKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEV 368 SK+IPFL+ P LD T AG GFDPL LS+ D + A+ ELK+ R+AMLA LG +V ++ Sbjct: 1 SKSIPFLKKPAALDGTLAGDVGFDPLGLSSVADVRFLAEAELKHCRLAMLAALGAIVQDI 60 Query: 369 VHLPN-KQFSNPVALDAIYQVPV--AGWVQILIAISVVE----LATFKMVYDPKRAAXQL 527 P + + ++ + V QIL+ +S +E LA F+ + D KRA Sbjct: 61 FTFPGVSKVVGSEKMTGVHDILVKQGAMGQILLWVSFLEVFGTLALFETL-DGKRAPGDF 119 Query: 528 GFDPL 542 FDPL Sbjct: 120 KFDPL 124 [28][TOP] >UniRef100_A8KCR8 Light harvesting complex protein 10 n=1 Tax=Guillardia theta RepID=A8KCR8_GUITH Length = 257 Score = 71.2 bits (173), Expect = 5e-11 Identities = 59/176 (33%), Positives = 85/176 (48%), Gaps = 26/176 (14%) Frame = +3 Query: 93 VAATPVMSRSAFAGSAVSRAPAPVAS----TMTMKA-SKAIPFLEAPEKLDETKAGYAGF 257 +AA+ V + + AG A+ A AP S +M+M+A SK +P+LEAP LD G GF Sbjct: 7 IAASVVTATAFLAGPALPSAHAPARSNAISSMSMQARSKPLPWLEAPPALDGKMEGDVGF 66 Query: 258 DPLYLSNYLDQ----DYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQ-----FSNPVAL 410 DPL++S+ L + + ELK+GRVAMLA G +V ++ P A Sbjct: 67 DPLWVSSMLPDAGWIKFLREAELKHGRVAMLAATGAIVQDIFTFPGVDKVIGAAKMTSAH 126 Query: 411 DAIYQVPVAG-----------WVQILIAISVVELA-TFKMVYDPKRAAXQLGFDPL 542 D + + G W+ +L +S + TFK + RA GFDPL Sbjct: 127 DKYLSLEIGGSKVATMHQMLLWIGLLEILSAPAIVQTFK--GETSRAPGDFGFDPL 180 [29][TOP] >UniRef100_Q4GWU4 Light-harvesting complex protein Lhcc5 n=1 Tax=Rhodomonas sp. CS24 RepID=Q4GWU4_RHDS2 Length = 255 Score = 70.5 bits (171), Expect = 8e-11 Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 5/107 (4%) Frame = +3 Query: 75 VIMYAFVAATPVMSRSAFAGSAVSRAPAPVASTMTM-KASKAIPFLEAPEKLDETKAGYA 251 V+ A VA+ + V+R A S+M M K S A+P+L+AP LDE+ GY Sbjct: 5 VLFGAVVASASAFVAPVLPSAGVARTNANAMSSMRMQKKSAAMPWLDAPPALDESMTGYV 64 Query: 252 GFDPLYLSNYLDQ----DYAAQGELKNGRVAMLACLGWLVAEVVHLP 380 GFDPL++S+ L + + E+K+GRVAMLA G +V ++ P Sbjct: 65 GFDPLWVSSMLPDPGYVKFLQEAEIKHGRVAMLAATGAIVQDIFTFP 111 [30][TOP] >UniRef100_B7FQE0 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FQE0_PHATR Length = 202 Score = 70.5 bits (171), Expect = 8e-11 Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 7/160 (4%) Frame = +3 Query: 93 VAATPVMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYL 272 + A+ + + +AFA ++ A VA + + S A+PFL PE L GFDPL Sbjct: 5 ILASMLSAAAAFAPASQGAGKASVA--LNAEKSPAMPFLPYPENLKGYIGDDIGFDPLGF 62 Query: 273 SNYLDQDYAAQGELKNGRVAMLACLGWLVAE---VVHLPNKQFSNPVALDAIYQVPVAG- 440 S+Y DY + E+K+GR+ MLA +G++ + +VH ++ A DA+ + V G Sbjct: 63 SDYFPMDYLRESEIKHGRICMLAVVGYIATDLGIIVHPYGSGLTSATAHDALLEKGVMGN 122 Query: 441 ---WVQILIAISVVELATFKMVYDPKRAAXQLGFDPLKMD 551 W+ L +S + AT +M+ R GF +D Sbjct: 123 ALIWIGALEMVSYI--ATAEMLQGSGREPGYFGFGTKYLD 160 [31][TOP] >UniRef100_A8KCQ6 Light harvesting complex protein 7 (Fragment) n=1 Tax=Guillardia theta RepID=A8KCQ6_GUITH Length = 198 Score = 70.1 bits (170), Expect = 1e-10 Identities = 48/122 (39%), Positives = 63/122 (51%), Gaps = 4/122 (3%) Frame = +3 Query: 189 SKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEV 368 S A+PFL+ P LD + G GFDPL S+ D + ELK+GR AMLA LG++V E+ Sbjct: 27 SAAVPFLKRPSNLDGSYVGDVGFDPLGFSDVFDLRVLREAELKHGRFAMLAVLGFIVQEL 86 Query: 369 VHLPNKQFSNPVALDA-IYQVPVAGWVQILIAISVVELATFKMVYDP---KRAAXQLGFD 536 P F +DA Y V G QI+ IS VE+ +++ KR FD Sbjct: 87 YTFP--FFPKMAPVDAHDYFVQQGGGSQIIFWISFVEIFGVVALFETLQGKREPGDFAFD 144 Query: 537 PL 542 PL Sbjct: 145 PL 146 [32][TOP] >UniRef100_A8KCR0 Light harvesting complex protein 8 (Fragment) n=1 Tax=Guillardia theta RepID=A8KCR0_GUITH Length = 222 Score = 69.7 bits (169), Expect = 1e-10 Identities = 54/169 (31%), Positives = 74/169 (43%), Gaps = 29/169 (17%) Frame = +3 Query: 123 AFAGSAVSRAPAPVASTMTMKASKA---------------------IPFLEAPEKLDETK 239 A A SA + AP+PV +A+ A FLE P LD T Sbjct: 8 ALAASAAAFAPSPVLPRAAQRAAAARNGPTMQLYKEGQLQGATVNLYSFLERPPALDGTW 67 Query: 240 AGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLP--NKQFSNPVALD 413 G GFDPL SN +D + + ELK+GRV MLA G +V +V P K F + Sbjct: 68 VGDVGFDPLGFSNIIDMRWLREAELKHGRVCMLAATGMIVQDVYQFPGVTKTF-GAAKMT 126 Query: 414 AIYQVPV--AGWVQILIAISVVEL----ATFKMVYDPKRAAXQLGFDPL 542 A++ V Q+L+ + +E+ A +M+ R GFDPL Sbjct: 127 ALHDAAVKQGAMQQLLLWLGFIEIFGFVAIVQMLQGSDRQPGDFGFDPL 175 [33][TOP] >UniRef100_Q2IA65 Chloroplast light harvesting protein isoform 14 n=1 Tax=Isochrysis galbana RepID=Q2IA65_ISOGA Length = 193 Score = 67.8 bits (164), Expect = 5e-10 Identities = 52/140 (37%), Positives = 76/140 (54%), Gaps = 7/140 (5%) Frame = +3 Query: 99 ATPVMSRSAFAGSA----VSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPL 266 A + S S AG A V R APV M S+A+PFLEAP KLD + AG GFDPL Sbjct: 3 ALSLQSLSLNAGMAPAARVQRMQAPV-----MIKSQALPFLEAPAKLDGSMAGDRGFDPL 57 Query: 267 YLSNYLDQDYAAQGELKNGRVAMLACLGWL-VAEVVHLPNKQFSNPVALDAIYQVPVAGW 443 L+ + +Y + ELK+GR+ MLA +G++ V ++P F+ V+ A + V Sbjct: 58 NLAGSFNLNYMREAELKHGRICMLAWVGYVAVDNGFYVP---FAPHVSSLAAHDTAVKSG 114 Query: 444 VQILI--AISVVELATFKMV 497 +L+ A+ V+E ++ V Sbjct: 115 NMLLLLGAVGVIEALSYNAV 134 [34][TOP] >UniRef100_B7G6N5 Protein fucoxanthin chlorophyll a/c protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G6N5_PHATR Length = 246 Score = 67.4 bits (163), Expect = 7e-10 Identities = 50/132 (37%), Positives = 67/132 (50%), Gaps = 14/132 (10%) Frame = +3 Query: 189 SKAIPFLEAPEKLDETKAGYAGFDPL-YLSNYLDQDYAAQGELKNGRVAMLACLGWLVAE 365 S+AIPF + P LD T AG GFDP+ + S+ D + E+K+GR+AMLA GW+ AE Sbjct: 59 SEAIPFQKRPHALDGTFAGDVGFDPIGFASSKEDLWKYREAEVKHGRLAMLASAGWIFAE 118 Query: 366 VVHLPNKQ-FSNPVALDA-----------IYQVPVAGWVQILIAISVVEL-ATFKMVYDP 506 P Q FS LDA + +V WV L+A + ++L K DP Sbjct: 119 RFDRPLAQLFSMEPVLDASNRNPALLNGGLGKVSPVYWVSCLVAAAAIDLNGIEKSRNDP 178 Query: 507 KRAAXQLGFDPL 542 LG+DPL Sbjct: 179 NYFPGNLGWDPL 190 [35][TOP] >UniRef100_B7FUM6 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FUM6_PHATR Length = 200 Score = 67.0 bits (162), Expect = 9e-10 Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 7/159 (4%) Frame = +3 Query: 93 VAATPVMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYL 272 V A+ + S +AFA +A PA S + + SK++PFL AP+ G GFDPL Sbjct: 5 VFASLLASAAAFAPAA---KPAASTSALNAEMSKSMPFLTAPKNTGGY-VGDVGFDPLGF 60 Query: 273 SNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQVPVAGWVQI 452 S+ D + + E+K+GR AMLA +G+++ + LP + L A ++ +QI Sbjct: 61 SDNFDMKWLRESEIKHGRAAMLATVGFVMQQFWTLPGMVHVDDSNL-APGAAGISPMLQI 119 Query: 453 LIAISVVELATFK-------MVYDPKRAAXQLGFDPLKM 548 + + +E T K M D R LGFDP+ M Sbjct: 120 VFGMGALEWWTNKGKVTMEDMFSDSSREPGNLGFDPMGM 158 [36][TOP] >UniRef100_Q5K274 Light harvesting protein 6 (Fragment) n=1 Tax=Guillardia theta RepID=Q5K274_GUITH Length = 213 Score = 63.9 bits (154), Expect = 7e-09 Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 22/158 (13%) Frame = +3 Query: 135 SAVSRAPAPVASTMTMKA-SKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQ----DYA 299 SA + A + S+M+M+A SK +P+LEAP LD G GFDPL++S+ L + Sbjct: 5 SAHAPARSNAISSMSMQARSKPLPWLEAPPALDGKMEGDVGFDPLWVSSMLPDAGWIKFL 64 Query: 300 AQGELKNGRVAMLACLGWLVAEVVHLPNKQ-----FSNPVALDAIYQVPVAG-----WVQ 449 + ELK+GRVAMLA G +V ++ P A D + + G Q Sbjct: 65 REAELKHGRVAMLAATGAIVQDIFTFPGVDKVIGAAKMTSAHDKYLSLEIGGSKVATMHQ 124 Query: 450 ILIAISVVEL-------ATFKMVYDPKRAAXQLGFDPL 542 +L+ I ++E+ TFK + RA GFDPL Sbjct: 125 MLLWIGLLEILSDPAIVQTFK--GETSRAPGDFGFDPL 160 [37][TOP] >UniRef100_B8C8Q0 Fucoxanthin chl a/c light-harvesting protein, lhcr type n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C8Q0_THAPS Length = 204 Score = 63.5 bits (153), Expect = 1e-08 Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 15/155 (9%) Frame = +3 Query: 123 AFAGSAVSRAPA---PVASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQD 293 A AGS+ + AP A+ + + SKA+PFL P D G GFDPL S+ D Sbjct: 9 ALAGSSAAFAPVNNGKAATALNAEMSKAMPFLINPANTDGL-IGSNGFDPLGFSDTFDIK 67 Query: 294 YAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALD---AIYQVPVAGWVQILIAI 464 + + E+K+GRVAMLA G++ ++ V+ P +S+ D A V ++ +QI+ A Sbjct: 68 WLQESEIKHGRVAMLASAGFIASQFVNFP--MYSSMHVDDSNMAPTVVGISAMLQIVCAA 125 Query: 465 SVVELATFKMVYDPK---------RAAXQLGFDPL 542 V E T+K + R GFDP+ Sbjct: 126 GVEEWRTYKGQVTMEDMFTGDMADRTPGDFGFDPM 160 [38][TOP] >UniRef100_Q2IA67 Chloroplast light harvesting protein isoform 12 n=1 Tax=Isochrysis galbana RepID=Q2IA67_ISOGA Length = 231 Score = 63.2 bits (152), Expect = 1e-08 Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 4/137 (2%) Frame = +3 Query: 144 SRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNG 323 + APAP ++ S+++PFL + LD G GFDP+ S L D+ + ELK+ Sbjct: 53 AEAPAPPPPPPPVQYSQSMPFLVKRKTLDGY-VGDIGFDPVGFSEILPMDWLREAELKHC 111 Query: 324 RVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQVPVAGWVQILIAISVVELATF----K 491 RVAMLA +G++ + H+ F+ A DA V Q+L+ + ++E+ F + Sbjct: 112 RVAMLATVGFVFTDFFHISGFDFTTLEAHDAC--VASGAMSQLLLWLGLLEVFGFIGIDQ 169 Query: 492 MVYDPKRAAXQLGFDPL 542 + RAA FDPL Sbjct: 170 TLRGSGRAAGDFSFDPL 186 [39][TOP] >UniRef100_B7GCV9 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GCV9_PHATR Length = 232 Score = 63.2 bits (152), Expect = 1e-08 Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 15/133 (11%) Frame = +3 Query: 189 SKAIPFLEAPEKLDETKAGYAGFDPLYL--SNYLDQDYAAQGELKNGRVAMLACLGWLVA 362 S ++PF+ + LD + G AGFDPL+L S L +DY E+K+GR+AMLA LGW + Sbjct: 46 SASVPFMPKNKLLDGSYPGDAGFDPLFLADSQALLEDYR-DAEIKHGRLAMLAALGWPAS 104 Query: 363 EV--------VHLP---NKQFSNPVALD-AIYQVPVAGWVQILIAISVVELATF-KMVYD 503 EV V +P ++ P L+ + ++PV W L S +E A K D Sbjct: 105 EVWDRAIANAVSMPPVVDESLRAPSVLNGGLGKIPVEYWAASLFVASFIECANIQKRRTD 164 Query: 504 PKRAAXQLGFDPL 542 + L FDPL Sbjct: 165 DRWFPGNLNFDPL 177 [40][TOP] >UniRef100_B7G502 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G502_PHATR Length = 206 Score = 62.4 bits (150), Expect = 2e-08 Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 8/164 (4%) Frame = +3 Query: 81 MYAFVAATPVMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFD 260 M + + A+ + S +AFA ++ S + + + + E+ E + K G FD Sbjct: 1 MKSIIFASLLTSAAAFAPASSSTTRTATPTALNEEFCRGYVGGESVEPMFIGKTGSKNFD 60 Query: 261 PLYLSNYLDQ--DYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFS---NPVALDAIYQ 425 PL L+ + + + + ELK+GR AMLA G++V E V +P + +S P +DA Sbjct: 61 PLGLTEKVPEWVPWFRESELKHGRAAMLAVAGFVVPEFVRVPGEAYSFAAIPNVIDAHDA 120 Query: 426 VPVAGWVQILIAISVVELATFKMVYDPK---RAAXQLGFDPLKM 548 +P A +QI IS VE +F + + R GFDPLK+ Sbjct: 121 LPQA-MIQIFAWISFVEAVSFPALANMNEFDRVPGDFGFDPLKL 163 [41][TOP] >UniRef100_Q5ENM0 Chloroplast light harvesting complex protein (Fragment) n=1 Tax=Heterocapsa triquetra RepID=Q5ENM0_HETTR Length = 166 Score = 61.2 bits (147), Expect = 5e-08 Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 1/100 (1%) Frame = +3 Query: 165 ASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLAC 344 A T + S A+PFL P L GFDPL +S+ L Y + ELK+GRV MLA Sbjct: 45 AMDKTSEMSPAVPFLNYPVPLKGYVGDEKGFDPLGVSDALPVYYLRESELKHGRVCMLAT 104 Query: 345 LGWLVAEV-VHLPNKQFSNPVALDAIYQVPVAGWVQILIA 461 +GW+ ++ V P QF N + A ++ G +Q +A Sbjct: 105 IGWMATDLGVRFPGDQFQNVSTVGAHDKMVELGLMQPFLA 144 [42][TOP] >UniRef100_Q2IA64 Chloroplast light harvesting protein isoform 15 n=1 Tax=Isochrysis galbana RepID=Q2IA64_ISOGA Length = 199 Score = 61.2 bits (147), Expect = 5e-08 Identities = 49/139 (35%), Positives = 73/139 (52%), Gaps = 9/139 (6%) Frame = +3 Query: 114 SRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQD 293 S AFA + ++RA AP+ S +S P+ + T G+ FDPL LS+ +D+D Sbjct: 8 SVQAFAPTGLARAQAPMRSGALAMSS---PYENELGVIQPT--GF--FDPLNLSSDIDED 60 Query: 294 YAAQ---GELKNGRVAMLACLGWLVAEVVHLPNK-----QFSN-PVALDAIYQVPVAGWV 446 AQ ELK+GRVA LA +G++V E P + +F++ P + AI +P GW Sbjct: 61 TFAQYRTAELKHGRVAQLAVIGYVVPEFYRFPGEIAPGIKFADVPNGVAAIDAIPTLGWA 120 Query: 447 QILIAISVVELATFKMVYD 503 QI+ I V+ F +D Sbjct: 121 QIIFLIGAVDYWGFLGDFD 139 [43][TOP] >UniRef100_B8CEQ3 Pt17531-like protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8CEQ3_THAPS Length = 196 Score = 61.2 bits (147), Expect = 5e-08 Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 9/128 (7%) Frame = +3 Query: 120 SAFAGSAVSRAPAPVASTMTMKAS----KAIPFLEAPEKLDETKAGYAGFDPLYLSNYLD 287 + A SA + APA ++S T + S + + + AP G+ FDPL LS D Sbjct: 7 ATLAASAAAFAPASISSPSTTQLSAWRDEVVVGITAP-------VGF--FDPLGLSKGKD 57 Query: 288 QD---YAAQGELKNGRVAMLACLGW-LVAEVVHLP-NKQFSNPVALDAIYQVPVAGWVQI 452 Y + ELKNGRVAM ACLGW L A VH N + SN L A+ ++P GW+Q Sbjct: 58 DATMAYYREAELKNGRVAMAACLGWYLNAGGVHPAFNSELSND-PLKAMVELPAVGWLQF 116 Query: 453 LIAISVVE 476 ++ +E Sbjct: 117 VLGCGAIE 124 [44][TOP] >UniRef100_B7FQE1 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FQE1_PHATR Length = 215 Score = 60.1 bits (144), Expect = 1e-07 Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 10/128 (7%) Frame = +3 Query: 186 ASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAE 365 AS+++PF+E P L + G AGFDP S++L D+ + ELK+GR+ M+A G+ + Sbjct: 44 ASESLPFMEYPPNL-KGYVGDAGFDPFRFSDFLPMDFLREAELKHGRICMMATAGFAAVD 102 Query: 366 ----VVHLPN--KQFSNPVALDAIYQVPVAGWVQILIAISVVEL----ATFKMVYDPKRA 515 V LP + ++ A DA+ V G Q+L+ S +E+ A +M+ R Sbjct: 103 LGLRVYPLPEGYEGLTSVTAHDAL--VKQGGMGQMLLWFSFLEIFDTVAVIQMLNGSGRR 160 Query: 516 AXQLGFDP 539 GFDP Sbjct: 161 PGDFGFDP 168 [45][TOP] >UniRef100_B8C0K4 Fucoxanthin chlorophyll a/c light-harvesting protein, lhcr type n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C0K4_THAPS Length = 203 Score = 59.7 bits (143), Expect = 1e-07 Identities = 34/97 (35%), Positives = 56/97 (57%) Frame = +3 Query: 78 IMYAFVAATPVMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGF 257 +M + + A+ S +AFA ++ RA + ++ SKA+P+L P LD + G GF Sbjct: 1 MMKSVIIASLACSAAAFAPASNGRAATSLEASAK---SKALPWLPNPSNLDG-RIGANGF 56 Query: 258 DPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEV 368 DPL +S Y DY + E+K+GRV M+A G++ ++ Sbjct: 57 DPLGISEYFPVDYLVESEIKHGRVCMMAWAGYVAVDL 93 [46][TOP] >UniRef100_B8C0K3 Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C0K3_THAPS Length = 203 Score = 59.7 bits (143), Expect = 1e-07 Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 11/163 (6%) Frame = +3 Query: 81 MYAFVAATPVM-SRSAFAGSAVSRAPAPVASTMTMKASKA--IPFLEAPEKLDETKAGYA 251 M VAA ++ S SAF AP+ A +T A K+ +PFLEAP LD G Sbjct: 1 MMKIVAALALVGSTSAFT------APSTGARAVTSLAEKSASLPFLEAPPNLDGG-VGDL 53 Query: 252 GFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEV---VHLPNKQFSNPVALDA-I 419 GFDP S+++ D+ + ELK+GR+ M+A LG++ ++ V+ + F + ++ A Sbjct: 54 GFDPFRFSDFVPIDFLREAELKHGRICMMAWLGFVAVDMGFRVYPAAEGFESLTSITAHD 113 Query: 420 YQVPVAGWVQILIAISVVE----LATFKMVYDPKRAAXQLGFD 536 V G Q+L+ S++E +A +M+ RA G D Sbjct: 114 AAVEQGGMSQMLLWFSLLEVFDTIAVQQMLEGSGRAPGDFGLD 156 [47][TOP] >UniRef100_B7G9B9 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G9B9_PHATR Length = 216 Score = 59.7 bits (143), Expect = 1e-07 Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 13/171 (7%) Frame = +3 Query: 75 VIMYAFVAATPVMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAG 254 ++ +A + AT S SAFA + ++ V +++ + SK++PF+ P+ LD + AG G Sbjct: 1 MMKFAVLTATLAASASAFAPA---QSNTRVVTSLNAERSKSLPFMNRPDLLDGSMAGDVG 57 Query: 255 FDPLYLSNY----LDQDYAAQGELKNGRVAMLACLGWLVAEVV-HLPNKQFSNPVA-LDA 416 FDPL LS +D + + E+K+ RVAM+A G L E+ P + + + DA Sbjct: 58 FDPLGLSTIEGVGVDLYWLREAEIKHCRVAMMAVAGVLWVELFGPAPGCEMATAKSQTDA 117 Query: 417 IYQVPVA-------GWVQILIAISVVELATFKMVYDPKRAAXQLGFDPLKM 548 +Q+ A G++ + + +A +RA G DPLK+ Sbjct: 118 FWQLWQAHPQYIAFGFIMTGLVEMITGIAITTGRESGQRAPGDFGLDPLKI 168 [48][TOP] >UniRef100_B7FQS0 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FQS0_PHATR Length = 217 Score = 59.7 bits (143), Expect = 1e-07 Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 34/175 (19%) Frame = +3 Query: 120 SAFAGSAVSRAPAPVAS----TMTM--------------KASKAIPFLEAPEKLDETKAG 245 ++FA SA + AP+P S T T + SKA+PF P+ LD + G Sbjct: 8 ASFAASASAFAPSPQNSQNSRTQTSLNNDLWGQPPSDGKEKSKALPFANRPKLLDGSMPG 67 Query: 246 YAGFDPLYLS--NYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLP-----------NK 386 GFDP + + Y + E+K+ R+AMLA GW+ AE+ P K Sbjct: 68 DVGFDPFGFAGADKASLMYMREAEIKHCRLAMLAVAGWVFAELFDKPIADAVGLPTALTK 127 Query: 387 QFSNPVALD-AIYQVPVAGWVQILIAISVVELATFKMVYDPKR--AAXQLGFDPL 542 ++P L+ + ++ +A W+ ++ +VE+ K+ D + GFDP+ Sbjct: 128 SGASPSILNGGLEKIDIAYWLAVVTLAGIVEIENSKVKEDKGKDYILGDCGFDPI 182 [49][TOP] >UniRef100_A4QPP6 Chloroplast light-harvesting complex protein Lhcz1; nuclear n=1 Tax=Isochrysis galbana RepID=A4QPP6_ISOGA Length = 222 Score = 59.7 bits (143), Expect = 1e-07 Identities = 52/162 (32%), Positives = 69/162 (42%), Gaps = 18/162 (11%) Frame = +3 Query: 120 SAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQ-DY 296 S A + S PAPV T TM+ D T AG GFDP L+ ++ Y Sbjct: 25 SMVAETPASPPPAPVPLTSTMRVG------------DNTLAGDFGFDPFQLAESPERLAY 72 Query: 297 AAQGELKNGRVAMLACLGWLVAEVVHLP-----------NKQFSNPVALD-AIYQVPVAG 440 + E+K+ R+AMLA GW +AE+++ P K +P L+ + VP Sbjct: 73 YREAEVKHARLAMLAAAGWPMAELLNKPLSDALGVKSILTKSGESPSILNGGLGNVPAVY 132 Query: 441 WVQILIAISVVELATFKMVY-----DPKRAAXQLGFDPLKMD 551 W IL VE + DPK L FDPL MD Sbjct: 133 WALILGLAIYVEAKSLDTQLNIGKRDPKYIPGMLQFDPLGMD 174 [50][TOP] >UniRef100_B8LDJ7 Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LDJ7_THAPS Length = 222 Score = 59.3 bits (142), Expect = 2e-07 Identities = 53/170 (31%), Positives = 75/170 (44%), Gaps = 20/170 (11%) Frame = +3 Query: 93 VAATPVMSRSAFAGSAVSRAPAPVASTMTMKA----SKAIPFLEAPEKLDETKAGYAGFD 260 V A+ V S +AFA ++ + V T T+ A SKA+PF+ P+ LD T AG GFD Sbjct: 4 VLASLVTSAAAFAPASTN-----VRQTTTLTAEKEMSKALPFVPRPKLLDGTLAGDVGFD 58 Query: 261 PLYLSNYLDQDYAA--QGELKNGRVAMLACLGWLVAEVVH------------LPNKQFSN 398 P + + + E+K+ R+AMLA +GW +AE L N S Sbjct: 59 PFGFGGADKESLISMREAEIKHSRLAMLAAVGWPLAEKFDGAIAQFLGLPSALTNSGASP 118 Query: 399 PVALDAIYQVPVAGWVQILIAISVVELAT--FKMVYDPKRAAXQLGFDPL 542 V + ++ WV + + ELA K K GFDPL Sbjct: 119 SVLNGGLDKIEPDYWVIVAAIAGLAELANNETKTATGKKYTPGDCGFDPL 168 [51][TOP] >UniRef100_Q5K278 Light harvesting protein 5 (Fragment) n=1 Tax=Guillardia theta RepID=Q5K278_GUITH Length = 225 Score = 58.5 bits (140), Expect = 3e-07 Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 12/132 (9%) Frame = +3 Query: 183 KASKAIPFLEAPEK--LDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWL 356 K AIPF P D T AG GFDPL +S +LD + + ELK+ RVAMLA G + Sbjct: 49 KGVTAIPFAGRPNTPAFDGTWAGDVGFDPLTISGWLDIKWLREAELKHCRVAMLAVAGCI 108 Query: 357 VAEVVHLPNKQ--FSNPVAL----DAIYQVPVAG----WVQILIAISVVELATFKMVYDP 506 ++ P + +S+ + L DA + G W+ AIS A +M+ Sbjct: 109 AQDLFRFPGAETVYSSDLKLTKLHDAALKTGTMGQMLFWLGSFEAISTA--AVIQMLQGS 166 Query: 507 KRAAXQLGFDPL 542 R GFDPL Sbjct: 167 GRKPGDFGFDPL 178 [52][TOP] >UniRef100_B8BYV3 Member of fucoxanthin chlorophyll a/c family, lhca clade n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BYV3_THAPS Length = 219 Score = 58.5 bits (140), Expect = 3e-07 Identities = 54/154 (35%), Positives = 71/154 (46%), Gaps = 16/154 (10%) Frame = +3 Query: 129 AGSAVSRAPAPVA---STMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNY----LD 287 AGSA S PA + S + + S+A+PFL P LD + AG GFDPL LS +D Sbjct: 11 AGSAYSFCPAANSVRSSALNAEKSQAMPFLNKPALLDGSMAGDKGFDPLGLSTIDDVGID 70 Query: 288 QDYAAQGELKNGRVAMLACLGWLVAEVV-HLPNKQFSN-PVALDAIYQV-------PVAG 440 + + E+K+ RVAMLA G L EV P + + DA +Q+ A Sbjct: 71 LYWLREAEIKHARVAMLAVAGALQVEVFGPAPGCEMATAKCQTDAFWQIWSAHPQYIAAS 130 Query: 441 WVQILIAISVVELATFKMVYDPKRAAXQLGFDPL 542 V I I +V +A RA G DPL Sbjct: 131 LVLITIVEAVSGIAATTGRESGDRAPGDFGLDPL 164 [53][TOP] >UniRef100_A4QPJ2 Chloroplast protein Lhcz1 (Fragment) n=1 Tax=Bigelowiella natans RepID=A4QPJ2_BIGNA Length = 226 Score = 58.5 bits (140), Expect = 3e-07 Identities = 51/154 (33%), Positives = 73/154 (47%), Gaps = 19/154 (12%) Frame = +3 Query: 144 SRAPAPVASTMTM--KASKAIPFLEAPEKLDE-TKAGYAGFDPLYLSNYLDQDYAAQ--- 305 +RA P A T T K S+A+PFLE P LD AG GFDP+ L+ D++ Q Sbjct: 48 TRAEIPEAPTTTTETKMSEAVPFLERPSNLDAYPMAGDYGFDPIKLAK--DKETLIQYRL 105 Query: 306 GELKNGRVAMLACLGW--------LVAEVVHLPN-----KQFSNPVALDAIYQVPVAGWV 446 E+K+GR+AMLA + W ++A++ +LPN S V + QV W Sbjct: 106 AEIKHGRLAMLAAVAWPLQELENPVLAKMFNLPNLVEETSGRSPSVLNGGLEQVSATYWT 165 Query: 447 QILIAISVVELATFKMVYDPKRAAXQLGFDPLKM 548 +L+ V+E + GFDPL + Sbjct: 166 AVLLLTIVIE-TIGNDSWGGTIQPGDYGFDPLNL 198 [54][TOP] >UniRef100_B8C7L8 Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C7L8_THAPS Length = 256 Score = 57.0 bits (136), Expect = 9e-07 Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 8/102 (7%) Frame = +3 Query: 150 APAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQD-YAAQGELKNGR 326 A A ST K S ++PFL P+ L AG GFDPL LS+ ++ Y + E+K+ R Sbjct: 32 ALATPPSTSLSKYSPSLPFLRRPQFLTGEFAGDVGFDPLGLSSSSEKVLYYREAEIKHAR 91 Query: 327 VAMLACLGWLVAEVVHLPNKQ-------FSNPVALDAIYQVP 431 +AMLA GW ++E++ P Q S ALDA +VP Sbjct: 92 LAMLAAAGWPLSELLDRPLTQQLDSSFNLSLSPALDATDRVP 133 [55][TOP] >UniRef100_B5Y4K0 Fucoxanthin chlorophyll a/c protein, lhcr type n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y4K0_PHATR Length = 279 Score = 57.0 bits (136), Expect = 9e-07 Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 20/138 (14%) Frame = +3 Query: 189 SKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYA----AQGELKNGRVAMLACLGWL 356 S AIPFL+ PE LD + G GFDP ++D + + + E+K+ R+AMLA GW Sbjct: 80 STAIPFLKRPEFLDGSMPGDVGFDPF---GFVDSEASLVSFREAEIKHARLAMLAAAGWP 136 Query: 357 VAEVVHLPNKQFSN----PVALDAIYQVP-----------VAGWVQILIAISVVEL-ATF 488 ++E L ++QF++ ALDA +VP W L A + ++L Sbjct: 137 LSE---LFDRQFASWLDLDPALDATDRVPSILNGGLGKISPVYWGACLGAAAAIDLYGLR 193 Query: 489 KMVYDPKRAAXQLGFDPL 542 K DP +LGFDPL Sbjct: 194 KKRSDPDYFPGKLGFDPL 211 [56][TOP] >UniRef100_Q9LKN9 Light-harvesting complex protein LHCC4 (Fragment) n=1 Tax=Guillardia theta RepID=Q9LKN9_GUITH Length = 219 Score = 56.6 bits (135), Expect = 1e-06 Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 24/167 (14%) Frame = +3 Query: 114 SRSAFAGSAV----SRAPAPVASTMTM--------KASKAIPFLEAPEKLDETKAGYAGF 257 S +AFA SA+ +RA +M + K IP P LD T G GF Sbjct: 12 SAAAFAPSAMLPRATRAARATGPSMQLYKDGSLQGKGVNIIPIFPRPASLDGTAVGDQGF 71 Query: 258 DPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLV-AEVVHLPNKQ--FSNPVALDAIYQV 428 DP S++++ + + E+K+GR+AMLA G +V A + P + F + I+ + Sbjct: 72 DPFGFSSWVNMKFVREAEIKHGRIAMLAFAGIMVEAAGIKAPGVESVFGPTKDIFEIHNL 131 Query: 429 PV--AGWVQILIAISVVEL-----ATFKMVYDP--KRAAXQLGFDPL 542 V QIL+ +E+ A +M+ DP KR GFDPL Sbjct: 132 AVEKGSMGQILLWTGFLEMVIGWPAMNEMLNDPSSKRIPGDFGFDPL 178 [57][TOP] >UniRef100_B8BYV4 Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BYV4_THAPS Length = 214 Score = 56.6 bits (135), Expect = 1e-06 Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 9/87 (10%) Frame = +3 Query: 129 AGSAVSRAPAP---VASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNY----LD 287 AGSA + APA +S + + S ++PF+ P LD + GY GFDPL LSN +D Sbjct: 12 AGSASAFAPASNSVKSSALNAERSPSLPFMNKPALLDPSMPGYKGFDPLGLSNIDDVGID 71 Query: 288 QDYAAQGELKNGRVAMLACLG--WLVA 362 + + E+K+ RVAMLA G W+ A Sbjct: 72 LYWLREAEIKHARVAMLAVAGAVWVEA 98 [58][TOP] >UniRef100_B8BU33 Fucoxanthin chlorophyll a/c light-harvesting protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BU33_THAPS Length = 252 Score = 56.6 bits (135), Expect = 1e-06 Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 44/187 (23%) Frame = +3 Query: 114 SRSAFA----GSAVSRAPAPVASTMTMKA------SKAIPFLEAPEKLDETKAGYAGFDP 263 S SAFA G+AV + + M K SKA+PFL P LD + G GFDP Sbjct: 14 SASAFAPANNGAAVKTSLDAMPDRMWNKMVDKTQRSKAMPFLPRPINLDGSYVGDVGFDP 73 Query: 264 LYLSNYLDQDYAA--------------------QGELKNGRVAMLACLGWLVAE------ 365 YLS+ +D+++A + ELK+GR+AM+A GWL + Sbjct: 74 FYLSS-IDKNFAGFIQPPSWEETNGLPTLYWMREAELKHGRIAMMAFAGWLATDFGVRFP 132 Query: 366 -----VVHLPNKQFSNPVALDA---IYQVPVAGWVQILIAISVVELATFKMVYDPKRAAX 521 +PN ++ + +D+ + + G+++I A +VE++ + R A Sbjct: 133 GAGEPYTSVPNAFSAHNIMVDSGAMWVMLSLIGFIEISTAAVLVEVSK----GENDREAG 188 Query: 522 QLGFDPL 542 FDPL Sbjct: 189 DFCFDPL 195 [59][TOP] >UniRef100_B7G871 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G871_PHATR Length = 197 Score = 55.8 bits (133), Expect = 2e-06 Identities = 54/168 (32%), Positives = 79/168 (47%), Gaps = 11/168 (6%) Frame = +3 Query: 81 MYAFVAATPVMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFD 260 M +AA+ V SAFA S++ A A +A P+ ++ T G+ FD Sbjct: 1 MKLLLAASLVSVTSAFAPSSLKSATT---------ALQASPYENELGVIEPT--GF--FD 47 Query: 261 PLYLSNYLDQDYAAQ---GELKNGRVAMLACLGWLVAEVVH--------LPNKQFSNPVA 407 PL LS +DQ+ Q ELK+GRVA LA +G++V E+ LP + N VA Sbjct: 48 PLGLSKDIDQEKFDQYRTAELKHGRVAQLAVIGYVVQEIYRFPFDIAPGLPCAEVPNGVA 107 Query: 408 LDAIYQVPVAGWVQILIAISVVELATFKMVYDPKRAAXQLGFDPLKMD 551 AI +P GW QI + V+ + +D A + DP +M+ Sbjct: 108 --AIQAIPALGWAQIFFLVGSVDYYGYLGDFD----AGKPDLDPAEME 149 [60][TOP] >UniRef100_B7FPL6 Fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FPL6_PHATR Length = 193 Score = 55.8 bits (133), Expect = 2e-06 Identities = 45/135 (33%), Positives = 64/135 (47%), Gaps = 9/135 (6%) Frame = +3 Query: 108 VMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAG----FDPLYLS 275 + S A GSA + APA + + S ++ + DET G FDPL LS Sbjct: 3 IASLFAIVGSAAAFAPA----SQIHRGSSSLSAWK-----DETVVGITAPVGFFDPLGLS 53 Query: 276 NYLDQD---YAAQGELKNGRVAMLACLGWLVAEVVHLP--NKQFSNPVALDAIYQVPVAG 440 + + Y + ELK+GRVAM ACLGW + P N + S+ L+A Q+P Sbjct: 54 KDKNDETMGYYRESELKHGRVAMAACLGWFITAGGTHPAFNSELSSD-PLEAARQLPFVA 112 Query: 441 WVQILIAISVVELAT 485 W+Q ++ VE T Sbjct: 113 WLQFILGCGAVEWLT 127 [61][TOP] >UniRef100_B8C0G1 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C0G1_THAPS Length = 221 Score = 55.1 bits (131), Expect = 3e-06 Identities = 41/120 (34%), Positives = 54/120 (45%), Gaps = 29/120 (24%) Frame = +3 Query: 270 LSNYLDQDYAAQG-------ELKNGRVAMLACLGWLVAEV-VHLPNKQ------------ 389 L Y+ QD G E+KNGRVAM+A +G+LV + VH P Sbjct: 52 LGRYILQDVNEDGIKWWQNAEIKNGRVAMVATIGYLVQKTGVHFPLYMGPNSSSDWLLSS 111 Query: 390 --------FSNPVALDAIYQVPVAGWVQILIAISVVELATFKMVY-DPKRAAXQLGFDPL 542 S+ ALD I VP AGW+Q+L A + EL +K + D G+DPL Sbjct: 112 TSGVTFGDVSHANALDTIAMVPSAGWLQVLFAAGLFELTAYKRQWMDGNEIPGDYGYDPL 171 [62][TOP] >UniRef100_UPI000184A2B2 Serine/arginine repetitive matrix protein 2 (Serine/arginine-rich splicing factor-related nuclear matrix protein of 300 kDa) (Ser/Arg- related nuclear matrix protein) (SR-related nuclear matrix protein of 300 kDa) (Splicing coactivator subunit SRm300) (30 n=1 Tax=Canis lupus familiaris RepID=UPI000184A2B2 Length = 2682 Score = 55.1 bits (131), Expect = 3e-06 Identities = 59/173 (34%), Positives = 82/173 (47%), Gaps = 5/173 (2%) Frame = -1 Query: 540 AGQSRAAPPRASGRTPS*RSPAQPQRWR*GSEPTQQQGPGRWR-PGRRG*RTACWAGARP 364 +G+SR+ P GR+ S R+PA+ R R S ++G R R P RRG +R Sbjct: 576 SGRSRSRTPARRGRSRS-RTPARRGRSR--SRTPARRGRSRSRTPARRG-------RSRS 625 Query: 363 RPPA---SQGRRASPHGRSSTRPGQRSPGRGSCSGTAGQTRHTQP*SRPASQAPPGRG*- 196 R PA S+ R GRS +R QR GS S ++R +Q SR S + Sbjct: 626 RTPARRRSRSRSVVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRI 685 Query: 195 PSRPSSSSSTPLAPARERPLTPRRRSGSSPG*QPQRRT**REGGTGGMRKEEK 37 SR S S S+P + A+ R R SGSSP + + RT R +G + + K Sbjct: 686 SSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSRTPPRRSRSGSSQPKAK 738 [63][TOP] >UniRef100_Q9UQ39 RNA binding protein (Fragment) n=1 Tax=Homo sapiens RepID=Q9UQ39_HUMAN Length = 956 Score = 54.7 bits (130), Expect = 5e-06 Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 2/170 (1%) Frame = -1 Query: 540 AGQSRAAPPRASGRTPS*RSPAQPQRWR*GSEPTQQQGPGRWR-PGRRG*RTACWAGARP 364 +G+SR+ P GR+ S R+PA+ R R P ++ G R R P RRG + P Sbjct: 609 SGRSRSRTPARRGRSRS-RTPARRGRSR-SRTPARRSGRSRSRTPARRGRSRS----RTP 662 Query: 363 RPPASQGRRASPHGRSSTRPGQRSPGRGSCSGTAGQTRHTQP*SRPASQAPPGRG*-PSR 187 R S+ R GRS +R QR GS S ++R +Q SR S + SR Sbjct: 663 RRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSR 722 Query: 186 PSSSSSTPLAPARERPLTPRRRSGSSPG*QPQRRT**REGGTGGMRKEEK 37 S S S+P + A+ R R SGSSP + + +T R +G + + K Sbjct: 723 RSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAK 772 [64][TOP] >UniRef100_Q9UQ35-2 Isoform 2 of Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo sapiens RepID=Q9UQ35-2 Length = 2334 Score = 54.7 bits (130), Expect = 5e-06 Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 2/170 (1%) Frame = -1 Query: 540 AGQSRAAPPRASGRTPS*RSPAQPQRWR*GSEPTQQQGPGRWR-PGRRG*RTACWAGARP 364 +G+SR+ P GR+ S R+PA+ R R P ++ G R R P RRG + P Sbjct: 644 SGRSRSRTPARRGRSRS-RTPARRGRSR-SRTPARRSGRSRSRTPARRGRSRS----RTP 697 Query: 363 RPPASQGRRASPHGRSSTRPGQRSPGRGSCSGTAGQTRHTQP*SRPASQAPPGRG*-PSR 187 R S+ R GRS +R QR GS S ++R +Q SR S + SR Sbjct: 698 RRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSR 757 Query: 186 PSSSSSTPLAPARERPLTPRRRSGSSPG*QPQRRT**REGGTGGMRKEEK 37 S S S+P + A+ R R SGSSP + + +T R +G + + K Sbjct: 758 RSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAK 807 [65][TOP] >UniRef100_Q9UQ35 Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo sapiens RepID=SRRM2_HUMAN Length = 2752 Score = 54.7 bits (130), Expect = 5e-06 Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 2/170 (1%) Frame = -1 Query: 540 AGQSRAAPPRASGRTPS*RSPAQPQRWR*GSEPTQQQGPGRWR-PGRRG*RTACWAGARP 364 +G+SR+ P GR+ S R+PA+ R R P ++ G R R P RRG + P Sbjct: 644 SGRSRSRTPARRGRSRS-RTPARRGRSR-SRTPARRSGRSRSRTPARRGRSRS----RTP 697 Query: 363 RPPASQGRRASPHGRSSTRPGQRSPGRGSCSGTAGQTRHTQP*SRPASQAPPGRG*-PSR 187 R S+ R GRS +R QR GS S ++R +Q SR S + SR Sbjct: 698 RRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSR 757 Query: 186 PSSSSSTPLAPARERPLTPRRRSGSSPG*QPQRRT**REGGTGGMRKEEK 37 S S S+P + A+ R R SGSSP + + +T R +G + + K Sbjct: 758 RSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAK 807 [66][TOP] >UniRef100_UPI0000F2DB84 PREDICTED: similar to splicing coactivator subunit SRm300 n=1 Tax=Monodelphis domestica RepID=UPI0000F2DB84 Length = 2785 Score = 54.3 bits (129), Expect = 6e-06 Identities = 54/178 (30%), Positives = 72/178 (40%), Gaps = 8/178 (4%) Frame = -1 Query: 537 GQSRAAPP----RASGRTPS*RSPAQPQRWR*GSEPTQQQGPGRWRPGRRG*RTACWAGA 370 G+SR+ P R+ RTP R PQRW P Q++G R P R G W+ + Sbjct: 501 GRSRSRTPNRRGRSRSRTPQWRRSRSPQRWGRSRSP-QRRGRSR-SPQRPG-----WSRS 553 Query: 369 RPRPPASQGRRASPHGRSSTR-PGQRSPGRGSCSGTAGQTRHTQP*SRPASQAPPGRG*P 193 R + R A+ GRS +R P R R G++R P R + P Sbjct: 554 RNAQRRGRSRSAARRGRSRSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTP----- 608 Query: 192 SRPSSSSSTPLAPARERPLTPRRRSGSSPG*QPQR---RT**REGGTGGMRKEEKESG 28 +R S S TP R R TP RR + +R R+ R GG R + G Sbjct: 609 ARRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRTRSPARRGGRSRSRTPARRGG 666 [67][TOP] >UniRef100_B8C770 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C770_THAPS Length = 194 Score = 53.9 bits (128), Expect = 8e-06 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%) Frame = +3 Query: 255 FDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVV-HLPNKQFSNPVALDAIYQVP 431 FDPL LS+Y+ D+A + EL NGR AMLA +GW +V + + +DAI Q Sbjct: 48 FDPLNLSDYVPVDWARRAELSNGRSAMLATVGWFFPKVFGTFDSTDVTTTDPIDAIMQAD 107 Query: 432 VAGWVQILIAISVVELATFKMVYDPK 509 W Q ++ V E +K + K Sbjct: 108 PQWWAQWILICGVFETWKYKKEMEGK 133 [68][TOP] >UniRef100_UPI00015558E9 PREDICTED: similar to splicing coactivator subunit SRm300, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI00015558E9 Length = 2677 Score = 53.9 bits (128), Expect = 8e-06 Identities = 61/196 (31%), Positives = 75/196 (38%), Gaps = 26/196 (13%) Frame = -1 Query: 537 GQSRAAPP----RASGRTPS*RSPAQPQRWR*GSEPTQQQGPGR--WRPGRRG*RTACWA 376 G+SR+ P R+ RTP R PQRW P Q++G R RPG R A Sbjct: 374 GRSRSRTPARKGRSRSRTPQWRRSRSPQRWGRSRSP-QRRGRSRSPQRPGWSRSRNAQRR 432 Query: 375 GARPRPPASQGRRASPHGRSSTRPGQRSPGRGSCSGTAGQTR-----HTQP*SRPASQAP 211 G R R A +GR S + R R+P R S + TR T R S+ P Sbjct: 433 G-RSRSTARRGRSRSKTPATRGRSRSRTPARRGRSRSRTPTRRRSRSRTSTRRRSRSRTP 491 Query: 210 PGRG---------------*PSRPSSSSSTPLAPARERPLTPRRRSGSSPG*QPQRRT** 76 RG P R S + +P+ R R TP RR G S P RR Sbjct: 492 TRRGRSRSRTPARRRSRTRSPVRRRSRTRSPVRRGRSRSRTPARRGGRSRSRTPARR--- 548 Query: 75 REGGTGGMRKEEKESG 28 GG R + G Sbjct: 549 --GGRSRSRTPARRGG 562 Score = 53.9 bits (128), Expect = 8e-06 Identities = 59/160 (36%), Positives = 78/160 (48%), Gaps = 8/160 (5%) Frame = -1 Query: 537 GQSRA-APPRASGRTPS*RSPAQPQRWR*GSEPTQQQGPGRWR-PGRRG*RTACWAGARP 364 G+SR+ P R GR+ S R+PA+ P ++ G R R P RRG R+ R Sbjct: 526 GRSRSRTPARRGGRSRS-RTPARRGGRSRSRTPARRGGRSRSRTPARRGGRS------RS 578 Query: 363 RPPASQGRRA---SP--HGRSSTRPGQRSPGRGSCSGTAGQTRHTQP*SRPASQAPPGRG 199 R PA +G R+ SP GRS +R R GS S ++R +Q SR S + Sbjct: 579 RTPARRGARSRTRSPVRRGRSHSRTPPRRGRSGSSSERKNKSRASQR-SRSNSSPEVKKS 637 Query: 198 *PS-RPSSSSSTPLAPARERPLTPRRRSGSSPG*QPQRRT 82 S R S S S+P A+ RP R RSGSSP + + RT Sbjct: 638 RTSLRRSRSLSSPRPKAKSRPSLRRSRSGSSPRPKAKSRT 677 [69][TOP] >UniRef100_UPI0000D9FB77 PREDICTED: hypothetical protein, partial n=1 Tax=Macaca mulatta RepID=UPI0000D9FB77 Length = 205 Score = 53.9 bits (128), Expect = 8e-06 Identities = 53/160 (33%), Positives = 61/160 (38%), Gaps = 22/160 (13%) Frame = -1 Query: 519 PPRASGRTPS*RSPAQPQRWR*GSEPTQQQGPGRWRPGRRG*RTACWAGARPRPPAS--- 349 PPR R P RS +QP P + PG W P RRG R +G++P PPA Sbjct: 21 PPRRGCRQPP-RSGSQP--------PPPARPPGFWEPPRRGCRQPPRSGSQPPPPARPPG 71 Query: 348 ------QGRRASPHGRSSTRPGQRSPG-----RGSCSGTAGQTRHTQP*SRPASQAPPGR 202 +G R P S P R PG R C P +RP P R Sbjct: 72 FWEPPRRGCRQPPRSGSQPPPPARPPGFWEPPRRGCRQPPRSGSQPPPPARPPGFWEPPR 131 Query: 201 G*PSRPSSSSSTPLAPARERPL--TPRR------RSGSSP 106 +P S S P PAR PRR RSGS P Sbjct: 132 RGCRQPPRSGSQPPPPARPPGFWEPPRRGCRQPPRSGSQP 171 [70][TOP] >UniRef100_B7G4U8 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G4U8_PHATR Length = 260 Score = 53.5 bits (127), Expect = 1e-05 Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 16/135 (11%) Frame = +3 Query: 183 KASKAIPFLEAPEKLDETKAGYAGFDPL-YLSNYLDQDYAAQGELKNGRVAMLACLGWLV 359 K S+++PF+E P LD T G GFDPL + D + E+K+ R+AMLA GW + Sbjct: 58 KMSQSLPFMERPAALDGTLVGDVGFDPLGFAKTKADLINYREAEVKHARLAMLAAAGWPL 117 Query: 360 AEV--VHLPNKQFSNPVALDA-----------IYQVPVAGWVQILIAISVVELATFKMV- 497 +E+ + N P+ LDA + +V WV L+A + +++ Sbjct: 118 SELFDAKIANWMGMTPL-LDANDRAPSLLNGGLGKVSPVYWVACLVAAAAIDVYGISKAR 176 Query: 498 -YDPKRAAXQLGFDP 539 +P LG DP Sbjct: 177 KNEPDYFPGNLGIDP 191