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[1][TOP]
>UniRef100_UPI000184A2B2 Serine/arginine repetitive matrix protein 2 (Serine/arginine-rich
splicing factor-related nuclear matrix protein of 300
kDa) (Ser/Arg- related nuclear matrix protein)
(SR-related nuclear matrix protein of 300 kDa) (Splicing
coactivator subunit SRm300) (30 n=1 Tax=Canis lupus
familiaris RepID=UPI000184A2B2
Length = 2682
Score = 57.8 bits (138), Expect = 4e-07
Identities = 43/127 (33%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
Frame = -2
Query: 449 RTTRPAH-SGRTTAKARARSGSAATTTPAHSGRTTATVPTRRGGAPRRRCAPAAAARRGR 273
R+ PA SGR+ ++ AR G + + TPA GR+ + P RRG R R A R R
Sbjct: 568 RSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRG---RSRSRTPARRGRSR 624
Query: 272 GERPQRRRTEEQMVAARKAGTLRDPPLKGGGGGRVPRKAK---KPRRKTVGSHKEAGGST 102
P RRR+ + V R R P +G G RK K RR S E S
Sbjct: 625 SRTPARRRSRSRSVVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSR 684
Query: 101 VWWRQGR 81
+ R+ R
Sbjct: 685 ISSRRSR 691
[2][TOP]
>UniRef100_Q3JMI3 Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei
1710b RepID=Q3JMI3_BURP1
Length = 595
Score = 55.5 bits (132), Expect = 2e-06
Identities = 46/122 (37%), Positives = 61/122 (50%), Gaps = 17/122 (13%)
Frame = -2
Query: 431 HSGRTTAKARARSGSA----------ATTTPAHSGRTTATVPTRRGG--APRRRCAPAAA 288
H G A+AR R G+A A PAH GR VP RR G PRRRCAP ++
Sbjct: 384 HRGARGARARRRGGAARAEAGRRVLRARHEPAHDGRAIPDVPQRRAGHRLPRRRCAPRSS 443
Query: 287 ARRGRGERPQRRR--TEEQMVAARKAGTLRD--PPLKGGGGGRVPRKAKKPR-RKTVGSH 123
R GR R +RRR + V++R +RD P +GG G R+ R + R R+ G
Sbjct: 444 ERAGR-RRVRRRRYALGDPDVSSR----VRDGGPRARGGDGTRLSRGGRGRRARRPCGRR 498
Query: 122 KE 117
++
Sbjct: 499 RQ 500
[3][TOP]
>UniRef100_Q9UQ39 RNA binding protein (Fragment) n=1 Tax=Homo sapiens
RepID=Q9UQ39_HUMAN
Length = 956
Score = 55.5 bits (132), Expect = 2e-06
Identities = 43/129 (33%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Frame = -2
Query: 449 RTTRPAH-SGRTTAKARARSGSAATTTPAHSGRTTATVPTRRGGAPRRRCAPAAAARRG- 276
R+ PA SGR+ ++ AR G + + TPA GR+ + P RR G R R ARRG
Sbjct: 601 RSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSR----TPARRGR 656
Query: 275 -RGERPQRRRTEEQMVAARKAGTLRDPPLKGGGGGRVPRKAK---KPRRKTVGSHKEAGG 108
R P+R R+ + + R R P +G G RK K RR S E
Sbjct: 657 SRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKK 716
Query: 107 STVWWRQGR 81
S + R+ R
Sbjct: 717 SRISSRRSR 725
[4][TOP]
>UniRef100_Q9UQ35-2 Isoform 2 of Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo
sapiens RepID=Q9UQ35-2
Length = 2334
Score = 55.5 bits (132), Expect = 2e-06
Identities = 43/129 (33%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Frame = -2
Query: 449 RTTRPAH-SGRTTAKARARSGSAATTTPAHSGRTTATVPTRRGGAPRRRCAPAAAARRG- 276
R+ PA SGR+ ++ AR G + + TPA GR+ + P RR G R R ARRG
Sbjct: 636 RSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSR----TPARRGR 691
Query: 275 -RGERPQRRRTEEQMVAARKAGTLRDPPLKGGGGGRVPRKAK---KPRRKTVGSHKEAGG 108
R P+R R+ + + R R P +G G RK K RR S E
Sbjct: 692 SRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKK 751
Query: 107 STVWWRQGR 81
S + R+ R
Sbjct: 752 SRISSRRSR 760
[5][TOP]
>UniRef100_Q9UQ35 Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo sapiens
RepID=SRRM2_HUMAN
Length = 2752
Score = 55.5 bits (132), Expect = 2e-06
Identities = 43/129 (33%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Frame = -2
Query: 449 RTTRPAH-SGRTTAKARARSGSAATTTPAHSGRTTATVPTRRGGAPRRRCAPAAAARRG- 276
R+ PA SGR+ ++ AR G + + TPA GR+ + P RR G R R ARRG
Sbjct: 636 RSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSR----TPARRGR 691
Query: 275 -RGERPQRRRTEEQMVAARKAGTLRDPPLKGGGGGRVPRKAK---KPRRKTVGSHKEAGG 108
R P+R R+ + + R R P +G G RK K RR S E
Sbjct: 692 SRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKK 751
Query: 107 STVWWRQGR 81
S + R+ R
Sbjct: 752 SRISSRRSR 760
[6][TOP]
>UniRef100_UPI0000DC1A1B UPI0000DC1A1B related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0000DC1A1B
Length = 491
Score = 55.1 bits (131), Expect = 2e-06
Identities = 44/131 (33%), Positives = 59/131 (45%), Gaps = 6/131 (4%)
Frame = -2
Query: 455 ARRTTRPAHSGRTTAKARAR-SGSAATTTPAHSGRTTATVPTRRGGAPRRRCAPAAAARR 279
+R ++ SGR+ ++ AR SG + + TPA GR+ + P RR G R R ARR
Sbjct: 324 SRSRSQARRSGRSRSRTPARRSGRSRSRTPARRGRSRSRTPARRSGRSRSR----TPARR 379
Query: 278 G--RGERPQRRRTEEQMVAARKAGTLRDPPLKGGGGGRVPRKAK---KPRRKTVGSHKEA 114
G R P RRR+ + + R R P +G G RK K RR S E
Sbjct: 380 GRSRSRTPARRRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEM 439
Query: 113 GGSTVWWRQGR 81
S V R+ R
Sbjct: 440 KKSHVSSRRSR 450
[7][TOP]
>UniRef100_UPI0000DA333B PREDICTED: similar to serine/arginine repetitive matrix 2 n=1
Tax=Rattus norvegicus RepID=UPI0000DA333B
Length = 2707
Score = 55.1 bits (131), Expect = 2e-06
Identities = 44/131 (33%), Positives = 59/131 (45%), Gaps = 6/131 (4%)
Frame = -2
Query: 455 ARRTTRPAHSGRTTAKARAR-SGSAATTTPAHSGRTTATVPTRRGGAPRRRCAPAAAARR 279
+R ++ SGR+ ++ AR SG + + TPA GR+ + P RR G R R ARR
Sbjct: 631 SRSRSQARRSGRSRSRTPARRSGRSRSRTPARRGRSRSRTPARRSGRSRSR----TPARR 686
Query: 278 G--RGERPQRRRTEEQMVAARKAGTLRDPPLKGGGGGRVPRKAK---KPRRKTVGSHKEA 114
G R P RRR+ + + R R P +G G RK K RR S E
Sbjct: 687 GRSRSRTPARRRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEM 746
Query: 113 GGSTVWWRQGR 81
S V R+ R
Sbjct: 747 KKSHVSSRRSR 757
[8][TOP]
>UniRef100_B1ZE31 Pseudouridine synthase n=1 Tax=Methylobacterium populi BJ001
RepID=B1ZE31_METPB
Length = 577
Score = 53.1 bits (126), Expect = 9e-06
Identities = 42/137 (30%), Positives = 55/137 (40%), Gaps = 16/137 (11%)
Frame = -1
Query: 429 QRPDNSKGARPQRQRSHDNAGPQRPDHSNGAHPPRRRAEEEVRARSGGAP---------- 280
+RP+ S+ RP+R +A P+R + GA P RR E R G P
Sbjct: 438 ERPERSREDRPRRDAPAGDARPRRREAGEGAAPERRGPPRERRFEGEGRPEGRPPRERSE 497
Query: 279 ----RKR*APAAAAHRGADGGRPEGRHTP--RPSFKGGRGGASTAKGQEAPPKNGGVPQG 118
R R A R A+ G PE R P RP G A + +G +AP + G
Sbjct: 498 GRPQRDRGEGAPRRERSAEAGAPERRGPPRDRPRAAEGERPARSPRGADAPERGGFRKGP 557
Query: 117 GRWLHRMVAPRTRSTRR 67
G L R + R RR
Sbjct: 558 GGRLRRQARHQGRRPRR 574