[UP]
BLASTX 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AU187344 PF011d03_r
(487 letters)
Database: uniref100
9,526,577 sequences; 3,332,566,763 total letters
Searching..................................................done
significant alignments:[graphical|details]
UniRef100_Q870P5 Related to 3'->5' exoribonuclease n=1 Tax=Neuro... 115 2e-24
UniRef100_Q1K617 Putative uncharacterized protein n=1 Tax=Neuros... 115 2e-24
UniRef100_Q2GTQ4 Putative uncharacterized protein n=1 Tax=Chaeto... 114 3e-24
UniRef100_A9S857 Predicted protein n=1 Tax=Physcomitrella patens... 113 7e-24
UniRef100_A4RY84 Predicted protein n=1 Tax=Ostreococcus lucimari... 113 7e-24
UniRef100_B7FL19 Putative uncharacterized protein n=1 Tax=Medica... 110 4e-23
UniRef100_A8JGN6 Predicted protein (Fragment) n=1 Tax=Chlamydomo... 110 6e-23
UniRef100_C0SD90 3'-5'-exoribonuclease n=1 Tax=Paracoccidioides ... 110 6e-23
UniRef100_C5Y9M2 Putative uncharacterized protein Sb06g031660 n=... 109 8e-23
UniRef100_C5PEU6 Exosome complex exonuclease RRP4, putative n=1 ... 109 8e-23
UniRef100_C1GFD9 Exosome complex exonuclease RRP4 n=1 Tax=Paraco... 109 8e-23
UniRef100_B8MNL3 Exosome complex exonuclease Rrp4, putative n=1 ... 109 8e-23
UniRef100_A7EZN7 Putative uncharacterized protein n=1 Tax=Sclero... 109 8e-23
UniRef100_Q1E5X8 Putative uncharacterized protein n=1 Tax=Coccid... 109 1e-22
UniRef100_C5K2A9 Exosome complex exonuclease Rrp4 n=1 Tax=Ajello... 109 1e-22
UniRef100_B6HEP3 Pc20g08110 protein n=1 Tax=Penicillium chrysoge... 109 1e-22
UniRef100_A1CJ56 Exosome complex exonuclease Rrp4, putative n=1 ... 109 1e-22
UniRef100_B4FVR4 Putative uncharacterized protein n=1 Tax=Zea ma... 108 1e-22
UniRef100_B4FK25 Putative uncharacterized protein n=1 Tax=Zea ma... 108 1e-22
UniRef100_Q2U564 Exosomal 3'-5' exoribonuclease complex n=1 Tax=... 108 1e-22
UniRef100_B8NV58 Exosome complex exonuclease Rrp4, putative n=1 ... 108 1e-22
UniRef100_B6JY62 Exosome complex exonuclease RRP4 n=1 Tax=Schizo... 108 1e-22
UniRef100_Q8LSI3 Exonuclease n=1 Tax=Phytophthora sojae RepID=Q8... 108 2e-22
UniRef100_B9ET84 Putative uncharacterized protein n=1 Tax=Oryza ... 108 2e-22
UniRef100_Q7XUA1 Os04g0520000 protein n=3 Tax=Oryza sativa RepID... 108 2e-22
UniRef100_Q0CBI0 Putative uncharacterized protein n=1 Tax=Asperg... 108 2e-22
UniRef100_B6QTI1 Exosome complex exonuclease Rrp4, putative n=1 ... 108 2e-22
UniRef100_C3ZTA6 Putative uncharacterized protein n=1 Tax=Branch... 107 3e-22
UniRef100_C5G008 Exosome complex exonuclease RRP4 n=1 Tax=Micros... 107 3e-22
UniRef100_A4RH01 Putative uncharacterized protein n=1 Tax=Magnap... 107 3e-22
UniRef100_C4JWI4 Putative uncharacterized protein n=1 Tax=Uncino... 107 4e-22
UniRef100_C1H5I3 Exosome complex exonuclease RRP4 n=1 Tax=Paraco... 107 4e-22
UniRef100_A6RT85 Putative uncharacterized protein n=1 Tax=Botryo... 107 4e-22
UniRef100_UPI0001983821 PREDICTED: hypothetical protein n=1 Tax=... 106 7e-22
UniRef100_A7PU41 Chromosome chr7 scaffold_31, whole genome shotg... 106 7e-22
UniRef100_Q4WWH3 Exosome complex exonuclease Rrp4, putative n=1 ... 106 7e-22
UniRef100_C9S555 Exosome complex exonuclease RRP4 n=1 Tax=Vertic... 106 7e-22
UniRef100_C6H939 Exosome complex exonuclease RRP4 n=1 Tax=Ajello... 106 7e-22
UniRef100_C0NJ23 Exosome complex exonuclease RRP4 n=1 Tax=Ajello... 106 7e-22
UniRef100_B0XZ51 Exosome complex exonuclease Rrp4, putative n=1 ... 106 7e-22
UniRef100_A2QXZ2 Contig An11c0370, complete genome n=1 Tax=Asper... 106 7e-22
UniRef100_A1D8C2 Exosome complex exonuclease Rrp4, putative n=1 ... 106 7e-22
UniRef100_B9GX78 Predicted protein n=1 Tax=Populus trichocarpa R... 105 1e-21
UniRef100_B3MFH2 GF11836 n=1 Tax=Drosophila ananassae RepID=B3MF... 105 2e-21
UniRef100_Q4P5D8 Putative uncharacterized protein n=1 Tax=Ustila... 105 2e-21
UniRef100_Q09704 Exosome complex component rrp4 n=1 Tax=Schizosa... 105 2e-21
UniRef100_B4NNA4 GK22923 n=1 Tax=Drosophila willistoni RepID=B4N... 105 2e-21
UniRef100_B4KRZ0 GI19036 n=1 Tax=Drosophila mojavensis RepID=B4K... 105 2e-21
UniRef100_A6R1F0 Putative uncharacterized protein n=1 Tax=Ajello... 105 2e-21
UniRef100_A9UXQ8 Predicted protein (Fragment) n=1 Tax=Monosiga b... 104 3e-21
UniRef100_Q9ZVT7 F15K9.4 protein n=1 Tax=Arabidopsis thaliana Re... 103 5e-21
UniRef100_B9SFN0 Rrp4, putative n=1 Tax=Ricinus communis RepID=B... 103 5e-21
UniRef100_B4LLW4 GJ20003 n=1 Tax=Drosophila virilis RepID=B4LLW4... 103 5e-21
UniRef100_B4J751 GH20673 n=1 Tax=Drosophila grimshawi RepID=B4J7... 103 5e-21
UniRef100_Q0U0B7 Putative uncharacterized protein n=1 Tax=Phaeos... 103 5e-21
UniRef100_C7YRH2 Predicted protein n=1 Tax=Nectria haematococca ... 103 6e-21
UniRef100_Q28ZE6 GA17783 n=2 Tax=pseudoobscura subgroup RepID=Q2... 103 8e-21
UniRef100_B4P9P3 GE11554 n=1 Tax=Drosophila yakuba RepID=B4P9P3_... 102 1e-20
UniRef100_B3NPN8 GG20018 n=1 Tax=Drosophila erecta RepID=B3NPN8_... 102 1e-20
UniRef100_UPI000023DEE2 hypothetical protein FG09961.1 n=1 Tax=G... 102 1e-20
UniRef100_Q5KQ17 Exosome complex exonuclease rrp4, putative n=1 ... 102 1e-20
UniRef100_A4VBG0 RRP4 protein n=1 Tax=Chironomus tentans RepID=A... 102 2e-20
UniRef100_B2VRD3 Exosome component 2 n=1 Tax=Pyrenophora tritici... 102 2e-20
UniRef100_B2AE31 Predicted CDS Pa_4_2660 n=1 Tax=Podospora anser... 102 2e-20
UniRef100_UPI0000EDE4C8 PREDICTED: similar to heterogeneous nucl... 101 2e-20
UniRef100_B5X6X1 Exosome complex exonuclease RRP4 n=1 Tax=Salmo ... 101 2e-20
UniRef100_Q5B7Q4 Putative uncharacterized protein n=1 Tax=Emeric... 100 4e-20
UniRef100_C8VHJ5 Exosome complex exonuclease Rrp4, putative (AFU... 100 4e-20
UniRef100_C0H9Z1 Exosome complex exonuclease RRP4 n=2 Tax=Salmo ... 100 5e-20
UniRef100_UPI00004493B3 exosome component 2 n=1 Tax=Gallus gallu... 100 7e-20
UniRef100_Q9W1M9 Rrp4 n=1 Tax=Drosophila melanogaster RepID=Q9W1... 100 7e-20
UniRef100_Q8MSZ7 GM02257p n=1 Tax=Drosophila melanogaster RepID=... 100 7e-20
UniRef100_C1BQF7 Exosome complex exonuclease RRP4 n=1 Tax=Caligu... 100 7e-20
UniRef100_B4QIR6 GD25033 n=1 Tax=Drosophila simulans RepID=B4QIR... 100 7e-20
UniRef100_B4I8P8 GM15529 n=1 Tax=Drosophila sechellia RepID=B4I8... 100 7e-20
UniRef100_C5GMH1 Exosome complex exonuclease Rrp4 n=1 Tax=Ajello... 100 7e-20
UniRef100_Q54EV5 Putative uncharacterized protein n=1 Tax=Dictyo... 100 9e-20
UniRef100_A8PR08 Putative uncharacterized protein n=1 Tax=Malass... 100 9e-20
UniRef100_UPI0001793417 PREDICTED: similar to rrp4 n=1 Tax=Acyrt... 99 1e-19
UniRef100_Q5BJ85 Exosome component 2 n=1 Tax=Xenopus (Silurana) ... 99 1e-19
UniRef100_UPI000186D87A Exosome complex exonuclease RRP4, putati... 99 2e-19
UniRef100_UPI000051A7E9 PREDICTED: similar to Rrp4 CG3931-PA n=1... 98 3e-19
UniRef100_UPI000192497E PREDICTED: similar to Exosome complex ex... 97 6e-19
UniRef100_UPI0000180C0E exosome component 2 n=1 Tax=Rattus norve... 97 6e-19
UniRef100_Q6GPU7 MGC82596 protein n=1 Tax=Xenopus laevis RepID=Q... 97 6e-19
UniRef100_C5DU72 ZYRO0C14410p n=1 Tax=Zygosaccharomyces rouxii C... 97 6e-19
UniRef100_UPI000180B6AD PREDICTED: similar to exosome component ... 97 7e-19
UniRef100_UPI00015B6058 PREDICTED: similar to rrp4 n=1 Tax=Nason... 97 7e-19
UniRef100_UPI00016E59D3 UPI00016E59D3 related cluster n=1 Tax=Ta... 97 7e-19
UniRef100_C3KII1 Exosome complex exonuclease RRP4 n=1 Tax=Anoplo... 97 7e-19
UniRef100_Q16KT2 Rrp4 n=1 Tax=Aedes aegypti RepID=Q16KT2_AEDAE 97 7e-19
UniRef100_UPI0000E48192 PREDICTED: similar to MGC82596 protein n... 96 1e-18
UniRef100_Q4SJH9 Chromosome 4 SCAF14575, whole genome shotgun se... 96 1e-18
UniRef100_C1MLQ5 Predicted protein n=1 Tax=Micromonas pusilla CC... 96 1e-18
UniRef100_Q8VBV3 Exosome complex exonuclease RRP4 n=2 Tax=Mus mu... 96 1e-18
UniRef100_UPI00015604EF PREDICTED: similar to Exosome component ... 95 3e-18
UniRef100_C4R4Z2 3'-5' exoribonuclease involved in rRNA processi... 95 3e-18
UniRef100_Q2KID0 Exosome complex exonuclease RRP4 n=1 Tax=Bos ta... 94 4e-18
UniRef100_B3LSI7 3'-5' exoribonuclease n=1 Tax=Saccharomyces cer... 94 5e-18
UniRef100_A8P7F6 Putative uncharacterized protein n=1 Tax=Coprin... 94 5e-18
UniRef100_P38792 Exosome complex component RRP4 n=4 Tax=Saccharo... 94 5e-18
UniRef100_UPI00005A1F0F PREDICTED: similar to Exosome complex ex... 94 6e-18
UniRef100_UPI0000EB242A Exosome complex exonuclease RRP4 (EC 3.1... 94 6e-18
UniRef100_A7TS41 Putative uncharacterized protein n=1 Tax=Vander... 94 6e-18
UniRef100_C5E3M1 KLTH0H14696p n=1 Tax=Lachancea thermotolerans C... 93 8e-18
UniRef100_C5L6L5 Exosome complex exonuclease rrp4, putative n=1 ... 93 1e-17
UniRef100_B6ABE4 Putative uncharacterized protein n=1 Tax=Crypto... 93 1e-17
UniRef100_B0XEG9 Exosome complex exonuclease RRP4 n=1 Tax=Culex ... 93 1e-17
UniRef100_B0WN41 Exosome complex exonuclease RRP4 n=1 Tax=Culex ... 93 1e-17
UniRef100_Q6FRN4 Similar to uniprot|P38792 Saccharomyces cerevis... 93 1e-17
UniRef100_Q6CA66 YALI0D05511p n=1 Tax=Yarrowia lipolytica RepID=... 93 1e-17
UniRef100_C8Z9K7 Rrp4p n=1 Tax=Saccharomyces cerevisiae EC1118 R... 93 1e-17
UniRef100_B9WG52 Exosome complex exonuclease, putative (Ribosoma... 93 1e-17
UniRef100_UPI0000E2214B PREDICTED: hypothetical protein isoform ... 92 1e-17
UniRef100_B4E001 cDNA FLJ52817, highly similar to Exosome comple... 92 1e-17
UniRef100_B4DKK6 cDNA FLJ52512, highly similar to Exosome comple... 92 1e-17
UniRef100_A3KFL5 Exosome component 2 n=1 Tax=Homo sapiens RepID=... 92 1e-17
UniRef100_A3KFL2 Exosome component 2 n=1 Tax=Homo sapiens RepID=... 92 1e-17
UniRef100_A3KFL1 Exosome component 2 (Fragment) n=1 Tax=Homo sap... 92 1e-17
UniRef100_Q59TN2 Likely exosome component Rrp4p n=1 Tax=Candida ... 92 1e-17
UniRef100_C4YH94 Exosome complex exonuclease RRP4 n=1 Tax=Candid... 92 1e-17
UniRef100_Q13868 Exosome complex exonuclease RRP4 n=1 Tax=Homo s... 92 1e-17
UniRef100_UPI00006D7468 PREDICTED: exosome component 2 n=1 Tax=M... 92 2e-17
UniRef100_A8PTK6 Exosome component 2, putative n=1 Tax=Brugia ma... 92 2e-17
UniRef100_Q75EW2 AAL034Cp n=1 Tax=Eremothecium gossypii RepID=Q7... 92 2e-17
UniRef100_UPI0001924513 PREDICTED: similar to exosome component ... 91 3e-17
UniRef100_B0XEH0 Exosome complex exonuclease RRP4 n=1 Tax=Culex ... 91 3e-17
UniRef100_UPI000194D863 PREDICTED: exosome component 2 n=1 Tax=T... 91 4e-17
UniRef100_Q6CNG5 KLLA0E12739p n=1 Tax=Kluyveromyces lactis RepID... 91 4e-17
UniRef100_Q7QHJ5 AGAP011211-PA n=1 Tax=Anopheles gambiae RepID=Q... 91 5e-17
UniRef100_Q5ZHN8 Putative uncharacterized protein n=1 Tax=Gallus... 90 7e-17
UniRef100_Q568S7 Exosome component 2 n=1 Tax=Danio rerio RepID=Q... 90 9e-17
UniRef100_A5E4J0 Exosome complex exonuclease RRP4 n=1 Tax=Lodder... 90 9e-17
UniRef100_UPI000179E790 UPI000179E790 related cluster n=1 Tax=Bo... 89 1e-16
UniRef100_A8WZW7 C. briggsae CBR-EXOS-2 protein n=2 Tax=Caenorha... 89 1e-16
UniRef100_C5M2N6 Exosome complex exonuclease RRP4 n=1 Tax=Candid... 89 1e-16
UniRef100_Q95XD0 Exosome (Multiexonuclease complex) component pr... 89 2e-16
UniRef100_UPI0000D55888 PREDICTED: similar to AGAP011211-PA n=1 ... 88 3e-16
UniRef100_B0DII3 Predicted protein (Fragment) n=1 Tax=Laccaria b... 88 3e-16
UniRef100_UPI000151B271 hypothetical protein PGUG_04543 n=1 Tax=... 87 6e-16
UniRef100_C4XXZ2 Putative uncharacterized protein n=1 Tax=Clavis... 87 6e-16
UniRef100_A5DMP2 Putative uncharacterized protein n=1 Tax=Pichia... 87 6e-16
UniRef100_A3LTN3 Predicted protein n=1 Tax=Pichia stipitis RepID... 87 6e-16
UniRef100_Q6BHN2 DEHA2G17248p n=1 Tax=Debaryomyces hansenii RepI... 86 1e-15
UniRef100_C1FDX4 Putative uncharacterized protein n=1 Tax=Microm... 86 2e-15
UniRef100_C4M3T2 Exosome complex exonuclease RRP4, putative n=1 ... 85 2e-15
UniRef100_Q57X83 Ribosomal RNA processing protein 4 n=2 Tax=Tryp... 85 3e-15
UniRef100_B0EKZ0 Rrp4, putative n=1 Tax=Entamoeba dispar SAW760 ... 85 3e-15
UniRef100_B0EKY3 Exosome complex exonuclease RRP4, putative n=1 ... 85 3e-15
UniRef100_A2DKL3 Exonuclease, putative n=1 Tax=Trichomonas vagin... 85 3e-15
UniRef100_Q8SUC4 Putative uncharacterized protein ECU10_1340 n=1... 84 6e-15
UniRef100_C9ZT82 Ribosomal RNA processing protein 4 (Exosome com... 83 1e-14
UniRef100_B3RNZ4 Putative uncharacterized protein n=1 Tax=Tricho... 83 1e-14
UniRef100_B9Q7M0 Exosome complex exonuclease, putative n=1 Tax=T... 82 2e-14
UniRef100_B9PM89 Exosome complex exonuclease, putative n=1 Tax=T... 82 2e-14
UniRef100_B6KE87 Exosome complex exonuclease, putative n=1 Tax=T... 82 2e-14
UniRef100_UPI00006CC357 hypothetical protein TTHERM_00586540 n=1... 81 4e-14
UniRef100_Q018A9 Exosomal 3'-5' exoribonuclease complex, subunit... 80 5e-14
UniRef100_A4HVU3 Exosome complex exonuclease, putative; ribosoma... 79 1e-13
UniRef100_Q4QFY3 Exosome complex exonuclease, putative; ribosoma... 79 2e-13
UniRef100_A4H7G3 Exosome complex exonuclease, putative; ribosoma... 77 8e-13
UniRef100_Q4DCG9 Exosome complex exonuclease, putative n=1 Tax=T... 76 1e-12
UniRef100_Q4CUM5 Exosome complex exonuclease, putative n=1 Tax=T... 76 1e-12
UniRef100_B7S458 Predicted protein n=1 Tax=Phaeodactylum tricorn... 75 2e-12
UniRef100_C4V9U4 Putative uncharacterized protein n=1 Tax=Nosema... 72 2e-11
UniRef100_B7XJL4 Exosome complex exonuclease RRP4 n=1 Tax=Entero... 71 4e-11
UniRef100_B8BXI9 Predicted protein n=1 Tax=Thalassiosira pseudon... 67 5e-10
UniRef100_A0CIG6 Chromosome undetermined scaffold_19, whole geno... 66 1e-09
UniRef100_A5KAJ3 Exosome complex exonuclease rrp4, putative n=1 ... 61 3e-08
UniRef100_B3L032 Exosome complex exonuclease rrp4, putative n=1 ... 61 4e-08
UniRef100_Q4UDE6 Putative uncharacterized protein n=1 Tax=Theile... 59 2e-07
UniRef100_UPI0001B7B228 UPI0001B7B228 related cluster n=1 Tax=Ra... 58 3e-07
UniRef100_Q4N656 Putative uncharacterized protein n=1 Tax=Theile... 58 3e-07
UniRef100_A5E8N9 Putative uncharacterized protein n=1 Tax=Bradyr... 40 3e-07
UniRef100_C6LSB7 Putative uncharacterized protein n=1 Tax=Giardi... 58 4e-07
UniRef100_A2Q2I9 Nucleic acid-binding, OB-fold n=1 Tax=Medicago ... 57 5e-07
UniRef100_UPI00015DF49D exosome component 2 n=1 Tax=Mus musculus... 57 6e-07
UniRef100_A2AV19 Exosome component 2 (Fragment) n=1 Tax=Mus musc... 57 6e-07
UniRef100_Q89X06 Blr0521 protein n=1 Tax=Bradyrhizobium japonicu... 43 7e-07
UniRef100_A8BI43 Putative uncharacterized protein n=1 Tax=Giardi... 57 8e-07
UniRef100_A7APY0 Putative uncharacterized protein n=1 Tax=Babesi... 57 8e-07
UniRef100_Q7RM76 Putative uncharacterized protein PY02309 n=1 Ta... 56 1e-06
UniRef100_Q4YBS3 Exosome complex exonuclease rrp4, putative n=1 ... 56 1e-06
UniRef100_Q9U0I4 Exosome complex exonuclease rrp4, putative n=1 ... 55 2e-06
UniRef100_Q4XTR1 Exosome complex exonuclease rrp4, putative n=1 ... 55 2e-06
UniRef100_Q5ASL5 Putative uncharacterized protein n=1 Tax=Emeric... 43 3e-06
UniRef100_C8VA31 Putative uncharacterized protein n=1 Tax=Asperg... 43 3e-06
UniRef100_UPI0001925155 PREDICTED: hypothetical protein, partial... 41 5e-06
UniRef100_A6R0R5 Predicted protein n=1 Tax=Ajellomyces capsulatu... 38 9e-06