AU187027 ( PF007c05_r )

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[1][TOP]
>UniRef100_Q7XZS8 R-phycoerythrin gamma subunit n=1 Tax=Corallina officinalis
           RepID=Q7XZS8_COROI
          Length = 319

 Score =  145 bits (365), Expect = 2e-33
 Identities = 75/140 (53%), Positives = 101/140 (72%), Gaps = 2/140 (1%)
 Frame = +3

Query: 72  AFAVTGMFPTAKTAGSAFTANALKAPVAAPAKAATSITM-VDAFQRRFQSPGKIGIDYSR 248
           AFAVTGMF  AK   ++FT      PV+   + + ++TM VDAFQ++FQ+ GKIG+DYSR
Sbjct: 5   AFAVTGMFAAAKVGVTSFTGAT--EPVSTRRRTSGNVTMAVDAFQKKFQTFGKIGVDYSR 62

Query: 249 PRKLSSYKRSG-PSSLIDYPISPAMAGFYTLSTCGRASGASKTLAKADEYMAKGINMVYK 425
           P+KL+SYKR G  ++ ++YP +P+ AG Y++++CG+ SGASK L K DEY AKG+  V+K
Sbjct: 63  PKKLASYKRGGFDAASVEYPNAPSFAGKYSIASCGQPSGASKILMKYDEYCAKGMLQVFK 122

Query: 426 RTAVASGVYTTKCAESTTPG 485
           R AV  GVYTTKC E T  G
Sbjct: 123 RNAVPFGVYTTKCTEGTVAG 142

[2][TOP]
>UniRef100_P83592 R-phycoerythrin gamma chain, chloroplastic n=1 Tax=Corallina
           officinalis RepID=PHEG_COROI
          Length = 319

 Score =  145 bits (365), Expect = 2e-33
 Identities = 75/140 (53%), Positives = 100/140 (71%), Gaps = 2/140 (1%)
 Frame = +3

Query: 72  AFAVTGMFPTAKTAGSAFTANALKAPVAAPAKAATSITM-VDAFQRRFQSPGKIGIDYSR 248
           AFAVTGMF  AK   ++FT      PV+   + + ++TM VDAFQ++FQ+ GKIG+DYSR
Sbjct: 5   AFAVTGMFAAAKVGVTSFTGAT--EPVSTRRRTSGNVTMAVDAFQKKFQTFGKIGVDYSR 62

Query: 249 PRKLSSYKRSG-PSSLIDYPISPAMAGFYTLSTCGRASGASKTLAKADEYMAKGINMVYK 425
           P+KL+SYKR G  ++ ++YP +P+ AG Y+++ CG+ SGASK L K DEY AKG+  V+K
Sbjct: 63  PKKLASYKRGGFDAASVEYPNAPSFAGKYSIAPCGQPSGASKILMKYDEYCAKGVLQVFK 122

Query: 426 RTAVASGVYTTKCAESTTPG 485
           R AV  GVYTTKC E T  G
Sbjct: 123 RNAVPFGVYTTKCTEGTVAG 142

[3][TOP]
>UniRef100_P34784 R-phycoerythrin gamma chain, chloroplastic n=1 Tax=Aglaothamnion
           neglectum RepID=PHEG_AGLNE
          Length = 317

 Score =  136 bits (343), Expect = 6e-31
 Identities = 76/139 (54%), Positives = 98/139 (70%), Gaps = 2/139 (1%)
 Frame = +3

Query: 72  AFAVTGMFPTAKTAGSAFTANALKAPV-AAPAKAATSITMV-DAFQRRFQSPGKIGIDYS 245
           AFAV GMF   K +GS FTA+    PV + PA +AT + MV D  QR++QS GKIG+DYS
Sbjct: 5   AFAVNGMFTPVKLSGS-FTASM---PVDSKPAASATGVRMVVDPLQRKYQSIGKIGVDYS 60

Query: 246 RPRKLSSYKRSGPSSLIDYPISPAMAGFYTLSTCGRASGASKTLAKADEYMAKGINMVYK 425
           RP+KL++Y RSG S  +++P +P+MAG Y+L+ C +A GA+K L K DEY AKG+  V K
Sbjct: 61  RPKKLATYVRSGYSVGMEFPNTPSMAGHYSLTDCDKAGGAAKILMKYDEYCAKGMLQVGK 120

Query: 426 RTAVASGVYTTKCAESTTP 482
           R A  +GVYTTKC E T P
Sbjct: 121 RAACRTGVYTTKCTEGTQP 139

[4][TOP]
>UniRef100_C7IWZ3 Os01g0363550 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group
           RepID=C7IWZ3_ORYSJ
          Length = 277

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 60/176 (34%), Positives = 66/176 (37%), Gaps = 16/176 (9%)
 Frame = +1

Query: 1   LPPCVRIARRRRRPPPPPPQPWLPPLPSRACSRPRRPLGRPSPPTP*RRRWLRLPRRRRR 180
           LP   R  R RRRPPPPP    L PLP R  S        P P  P R  W R  RRR  
Sbjct: 7   LPGFHRPLRPRRRPPPPPR---LVPLPLRLFSSIEFLRDSPPPVAPDRGTWTRSGRRRGG 63

Query: 181 SRWWTPSSAASSRRARLVLTTRARGSCRRTSARARRR*LTTPSPRPWLVSTPCPPAAGLR 360
           +                      RGS  R   R RR    +P+  PW   T  P     R
Sbjct: 64  A--------------------GGRGSSSRRCGRGRRLCTASPTSSPW---TSPPTRFSPR 100

Query: 361 ARRRLW---PRRTSTWPRASTWCTS-------------APPLRRVCTRPSAPSRPP 480
            RRR W     R+ + PRA+T C S             APP  R     S PS PP
Sbjct: 101 GRRRPWSTPSARSRSSPRAATPCASTSARCPRAGSPPCAPPPPRAAPGCSTPSPPP 156

[5][TOP]
>UniRef100_Q69340 Pseudorabies virus ORF1, ORF2, and ORF3 n=1 Tax=Suid herpesvirus 1
            RepID=Q69340_9ALPH
          Length = 1958

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 47/120 (39%), Positives = 59/120 (49%), Gaps = 18/120 (15%)
 Frame = -1

Query: 329  ETSHGRGDGVVNQRRRARALVRRQ----LPRARVVNTNLARRLEAALEGVHHRDRRRRLG 162
            E  HG G G V  R  A  ++  +    +P A V +  + RR+ A   G+  R  +R +G
Sbjct: 1520 EDGHGPGRGAVAGRGLADVVLVPEPLAGVPGAAVADAAVGRRVGAG-PGLPERGEQRPVG 1578

Query: 161  RRS---HRRLQGVGGEGRPS----GLRGREHARDGKGGSHGCGGGG-------GGRRRRR 24
            RR    H R   VGG   P+    GLRGR   R G+GG  G GGGG       GGRRRRR
Sbjct: 1579 RRGPVGHEREVVVGGAALPARGPGGLRGR--GRGGRGGGGGGGGGGGRGPRGRGGRRRRR 1636

[6][TOP]
>UniRef100_Q5Z8D5 Os01g0349000 protein n=1 Tax=Oryza sativa Japonica Group
           RepID=Q5Z8D5_ORYSJ
          Length = 231

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 65/190 (34%), Positives = 75/190 (39%), Gaps = 35/190 (18%)
 Frame = +1

Query: 4   PPCVRIARRRRRPPPPPPQPWL--------PPLPS---RACSR---PRRPL--------- 114
           PP  R  R RRR  PPPP P L        P  PS   R+ SR   PRRP          
Sbjct: 48  PPPPRTCRHRRRRRPPPPHPALRRRLRAPQPRRPSPTRRSPSRSGLPRRPQFAPLPFPRR 107

Query: 115 -------GRPSPPTP*RRRWLRLPRRRRRSRWWTPSSAASSRRARLVLTTRARGSCRRTS 273
                    P PPT    R    PRR   SR    ++AA   R R V   R+  + RR  
Sbjct: 108 PPFPSTPPPPPPPTSPSPRPTSTPRREPSSR---ATAAACVTRLRRVGPPRSFSTRRRGR 164

Query: 274 ARARRR*LTTPSPRP---WLVSTPCPPAAGLRARRRLWPRRTSTWP--RASTWCTSAPPL 438
            R  RR +    P P   W V  P    +  R R    PRR    P  R S  C+SA P 
Sbjct: 165 CRVARRRIVAAVPLPRGRWPVGEPARRFSPHRLRAA--PRRLRATPPRRPSARCSSA-PT 221

Query: 439 RRVCTRPSAP 468
           RR+   P+ P
Sbjct: 222 RRLSPPPARP 231

[7][TOP]
>UniRef100_A8MSW5 Putative uncharacterized protein TNRC18 n=1 Tax=Homo sapiens
            RepID=A8MSW5_HUMAN
          Length = 1308

 Score = 52.4 bits (124), Expect(2) = 2e-06
 Identities = 59/163 (36%), Positives = 66/163 (40%), Gaps = 20/163 (12%)
 Frame = +1

Query: 40   PPPPPPQPWLPP-------LPSRACSRPRRPLGRPSPPTP*RRRWLRLPRRRRRSRWWTP 198
            PPPPPP P LPP       LP R    P  PL RP PP P     L  P + R     T 
Sbjct: 1136 PPPPPPHPPLPPPPLPPPPLPLRLPPLPPPPLPRPHPPPPPPLPPLLPPPQTR-----TL 1190

Query: 199  SSAASSRR---ARLVLTTRARGSCRRTSARARR--------R*LTTPSPRPWLVSTPCPP 345
             +A + R+    RL L  R R   R  S  ARR        R    PSPR  L S     
Sbjct: 1191 PAARTMRQPPPPRLALPRRRRSPPRPPSRPARRGPRPTPQARRRPRPSPRRLLRSPHSLC 1250

Query: 346  AAGLRARRRLWPR--RTSTWPRASTWCTSAPPLRRVCTRPSAP 468
            +  LR   R  PR  R ST P   +W  S    R   T P +P
Sbjct: 1251 SPRLRPGPRADPRRERASTSPPPRSW-PSGSACRPWRTGPRSP 1292

 Score = 22.3 bits (46), Expect(2) = 2e-06
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 12   RPHRTSSPSSPPPP 53
            RPHR   P   PPP
Sbjct: 1122 RPHRPPPPPPHPPP 1135

[8][TOP]
>UniRef100_UPI0000EBC524 PREDICTED: similar to serine/arginine repetitive matrix 1 isoform 2
            n=1 Tax=Bos taurus RepID=UPI0000EBC524
          Length = 901

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 54/159 (33%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
 Frame = +1

Query: 28   RRRRPPPPP------PQPWLPPLPSRACSRPRRPLGRPSPPTP*RRRWLRLPRRRRRSRW 189
            RRR P PPP      P+ + PP+  R    P       SPP P +RR    P  +RR   
Sbjct: 576  RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSH 635

Query: 190  WTP----SSAASSRRARLVLTTRARGSCRRTSARARR----R*LTTPSPRPWLVSTPCPP 345
              P    SS  + RR+  + +   +GS    SAR  R        +PSPRP    T  PP
Sbjct: 636  SPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSAREARSPQPNKRHSPSPRPRAPQTSSPP 695

Query: 346  AAGLRARRRLWP-RRTSTWPRASTWCTSAPPLRRVCTRP 459
             A  R    L P RR S  P       S+ P+RRV   P
Sbjct: 696  PA--RRGASLSPQRRQSPSP-------SSRPIRRVSRTP 725

[9][TOP]
>UniRef100_UPI0000EBC50E PREDICTED: similar to serine/arginine repetitive matrix 1 isoform 1
            n=1 Tax=Bos taurus RepID=UPI0000EBC50E
          Length = 915

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 54/159 (33%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
 Frame = +1

Query: 28   RRRRPPPPP------PQPWLPPLPSRACSRPRRPLGRPSPPTP*RRRWLRLPRRRRRSRW 189
            RRR P PPP      P+ + PP+  R    P       SPP P +RR    P  +RR   
Sbjct: 590  RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSH 649

Query: 190  WTP----SSAASSRRARLVLTTRARGSCRRTSARARR----R*LTTPSPRPWLVSTPCPP 345
              P    SS  + RR+  + +   +GS    SAR  R        +PSPRP    T  PP
Sbjct: 650  SPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSAREARSPQPNKRHSPSPRPRAPQTSSPP 709

Query: 346  AAGLRARRRLWP-RRTSTWPRASTWCTSAPPLRRVCTRP 459
             A  R    L P RR S  P       S+ P+RRV   P
Sbjct: 710  PA--RRGASLSPQRRQSPSP-------SSRPIRRVSRTP 739

[10][TOP]
>UniRef100_UPI0000F33DFB UPI0000F33DFB related cluster n=1 Tax=Bos taurus RepID=UPI0000F33DFB
          Length = 910

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 54/159 (33%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
 Frame = +1

Query: 28   RRRRPPPPP------PQPWLPPLPSRACSRPRRPLGRPSPPTP*RRRWLRLPRRRRRSRW 189
            RRR P PPP      P+ + PP+  R    P       SPP P +RR    P  +RR   
Sbjct: 585  RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSH 644

Query: 190  WTP----SSAASSRRARLVLTTRARGSCRRTSARARR----R*LTTPSPRPWLVSTPCPP 345
              P    SS  + RR+  + +   +GS    SAR  R        +PSPRP    T  PP
Sbjct: 645  SPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSAREARSPQPNKRHSPSPRPRAPQTSSPP 704

Query: 346  AAGLRARRRLWP-RRTSTWPRASTWCTSAPPLRRVCTRP 459
             A  R    L P RR S  P       S+ P+RRV   P
Sbjct: 705  PA--RRGASLSPQRRQSPSP-------SSRPIRRVSRTP 734

[11][TOP]
>UniRef100_C5YDG9 Putative uncharacterized protein Sb06g024545 (Fragment) n=1
           Tax=Sorghum bicolor RepID=C5YDG9_SORBI
          Length = 226

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 58/180 (32%), Positives = 73/180 (40%), Gaps = 29/180 (16%)
 Frame = +1

Query: 31  RRRPPPPPPQPWLPPLPSRA-----------------------CSRPRRPLGRPS---PP 132
           R RPPPPPP P  PP   R+                       C R   P   P+    P
Sbjct: 42  RPRPPPPPPLPRRPPWARRSGRARTAAVTRRTAACACGAGASGCRRSGSPARSPASGWAP 101

Query: 133 TP*RRRWLRLPRRRRRSRW-WTPSSAASSRRARLVLTTRARGSCRRTSARARRR*LTTPS 309
           +P  RRW     RR R+ W  +PS A ++R +    T+R R +C R     R R   T  
Sbjct: 102 SP-PRRW-----RRARTTWRRSPSRAPATRTS----TSRPRRTCSRARPPRRPR---TCR 148

Query: 310 PRPWLVSTPCPPAAGLRARRRLWPRRTSTWPRA--STWCTSAPPLRRVCTRPSAPSRPPR 483
           PRP    +P PP + L  RR   P +    PRA  +   T+  P  R   RP    R PR
Sbjct: 149 PRP---RSPPPPTSLLCRRRAPAPVKAQAMPRAPRAAAPTTPAPAPRRRPRPRPRRRRPR 205

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 57/163 (34%), Positives = 63/163 (38%), Gaps = 6/163 (3%)
 Frame = +1

Query: 7   PCVRIARRRRRPPPPPPQPW-----LPPLPSRACSRPRRPLGRPSPPTP*RRRWLRLPRR 171
           P  R ARR+      PP  W     LPP       RP RP   P PP P R  W R   R
Sbjct: 17  PLHRQARRK------PPWTWTTLRSLPP-------RPPRPRPPPPPPLPRRPPWARRSGR 63

Query: 172 RRRSRWWTPSSAASSRRARLVLTTRARGSCRRTSARARRR*LTTPSPRP-WLVSTPCPPA 348
            R        +AA +RR            CRR+ + AR       SP   W    P PP 
Sbjct: 64  AR--------TAAVTRRTAACACGAGASGCRRSGSPAR-------SPASGW---APSPPR 105

Query: 349 AGLRARRRLWPRRTSTWPRASTWCTSAPPLRRVCTRPSAPSRP 477
              RA R  W R  S  P   T  TS P  RR C+R   P RP
Sbjct: 106 RWRRA-RTTWRRSPSRAPATRT-STSRP--RRTCSRARPPRRP 144

[12][TOP]
>UniRef100_C4JBY0 Putative uncharacterized protein n=1 Tax=Zea mays
           RepID=C4JBY0_MAIZE
          Length = 213

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 57/184 (30%), Positives = 70/184 (38%), Gaps = 39/184 (21%)
 Frame = +1

Query: 7   PCVRIARRRRRPPPPPPQPWLPPLPSRACSRPRR-------------PLGRPSPPTP*RR 147
           P +R  RR  R  P  P P  P   SR+ S PRR             P   PSP TP RR
Sbjct: 40  PHLRCPRRGARRAPRSP-PAAPSASSRSSSAPRRCARRRCPTAAATAPASSPSPTTPTRR 98

Query: 148 RWLRL------PRRRRRSRWWTPSSAASSR-----------------RARLVLTTRARGS 258
              R       PRR   +  W  + A+++R                  A  + TT   G+
Sbjct: 99  SPARKCRPPGGPRRTGSTASWRSAPASTTRPGATSSTTTTTTTTRTSTASTLTTTTTAGA 158

Query: 259 CRRTSARARRR*---LTTPSPRPWLVSTPCPPAAGLRARRRLWPRRTSTWPRASTWCTSA 429
              T   ARRR      TPSP  W          G R+ RR   R   +WP + TW TS+
Sbjct: 159 ASATRTTARRRTPGGTATPSPSCW---------RGPRSERRGCSR---SWPSSVTWPTSS 206

Query: 430 PPLR 441
           P  R
Sbjct: 207 PRSR 210

[13][TOP]
>UniRef100_UPI0001B4C795 NADH dehydrogenase I chain L n=1 Tax=Streptomyces hygroscopicus ATCC
            53653 RepID=UPI0001B4C795
          Length = 888

 Score = 52.0 bits (123), Expect(2) = 9e-06
 Identities = 57/156 (36%), Positives = 61/156 (39%), Gaps = 10/156 (6%)
 Frame = +1

Query: 46   PPPPQPWLPPLPSRACSRPRRPLGRP-SPPTP*RRRWLRLPR-------RRRRSRWWTPS 201
            PPPP+P  PP P R+   PRR L RP  PP   RRR   LPR       R RR R   P 
Sbjct: 578  PPPPRP--PPPPRRSRFPPRRRLQRPVRPPRARRRRPRPLPRPRGRRDVRTRRGRCPPP- 634

Query: 202  SAASSRRARLVLTTRARGSCRRTSARARRR*LTTPSPR--PWLVSTPCPPAAGLRARRRL 375
                +RR R     R R    R +AR   R      PR    L   P  PA   R RRR 
Sbjct: 635  ----ARRGRPPRPDRQRADLSRRAARGLPRPGRGRRPRRSGSLTREPHRPAIPPRGRRRA 690

Query: 376  WPRRTSTWPRASTWCTSAPPLRRVCTRPSAPSRPPR 483
             P R    P          P R    RP A    PR
Sbjct: 691  PPARLRRRPVPG-------PARAAGPRPGAGRAAPR 719

 Score = 20.8 bits (42), Expect(2) = 9e-06
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 11  ASASHVVAVVPPPP 52
           A  +HVV   PPPP
Sbjct: 568 AGVAHVVDSRPPPP 581

[14][TOP]
>UniRef100_UPI0001B55E13 putative chaplin n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B55E13
          Length = 293

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 61/185 (32%), Positives = 66/185 (35%), Gaps = 36/185 (19%)
 Frame = +1

Query: 34  RRPPPPPPQPWLPPLPSRA-CSRPRRPLG---------RPSPPTP*RRRWLRLPRRRRRS 183
           RRP P PPQ    P P  + C+ PR P G          P+PP+P      R PR R RS
Sbjct: 108 RRPAPVPPQDVTAPAPPPSRCTPPRAPAGPSAPRAAGPPPAPPSP-----RRSPRPRARS 162

Query: 184 RWW--------------------TPSSAASSRRARLVLTTRARGSCRRTSARARRR*LTT 303
           R                      TP+ A  S R R       R   R    R   R    
Sbjct: 163 RTRATPALRSAAPAPRPAPPAADTPARAPRSPRPRAPAPGTPRSPPRPPGPRPPDRAARA 222

Query: 304 PSPRPWLVSTPCP-PAAGLRARRRLWPR--RTSTWPRASTWCTSAPPLR---RVCTRPSA 465
           P P P     P P P    RAR R  PR    S  P        APP R   R  T P  
Sbjct: 223 P-PSPPASPPPAPAPPRPARARPRAAPRAPADSATPPPRAHRPRAPPRRPPVRARTEPPP 281

Query: 466 PSRPP 480
           PSRPP
Sbjct: 282 PSRPP 286

[15][TOP]
>UniRef100_Q82KY9 Putative protoporphyrinogen oxidase n=1 Tax=Streptomyces
           avermitilis RepID=Q82KY9_STRAW
          Length = 474

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 47/150 (31%), Positives = 58/150 (38%), Gaps = 11/150 (7%)
 Frame = +1

Query: 55  PQPW---LPPLPSRACSRPRRPLGRPSPPTP*RRRWLRLPRRRRRSRWWTPSSAASSRRA 225
           P PW    PP P  +C  PR P  RPS P    R W   P         +P +AASS   
Sbjct: 277 PTPWSSPCPPRPPPSCCAPRHPPPRPSWPASSTRPWRWSPSPTAAVGPASPKAAASSCLP 336

Query: 226 RLVLTTRARGSCRRTSARARRR*LTTPSPRPWLVSTPCPPAAGLRARRR--------LWP 381
                +R R S  R+ A +R R     +P  W     C   +G  ARRR         W 
Sbjct: 337 STGAPSRHRRSPPRSGAGSRTR-----TPTCWC----CARRSGGTARRRSSAGTTPASWT 387

Query: 382 RRTSTWPRASTWCTSAPPLRRVCTRPSAPS 471
            R +T  R   W    PP R     P+ P+
Sbjct: 388 SRATTCARRPAW----PPRRSPAASPAGPT 413

[16][TOP]
>UniRef100_B2BXX3 Putative uncharacterized protein n=1 Tax=Capsella rubella
           RepID=B2BXX3_9BRAS
          Length = 839

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 61/175 (34%), Positives = 73/175 (41%), Gaps = 24/175 (13%)
 Frame = +1

Query: 22  ARRRRRPPPPPPQPWLPPLPSRACSRPRRPL-GRPSPPTP*RRRWLRLPRRRRRS----- 183
           ARRRR P PP  +   P  P+R+   P  P   R SP  P RRR   +P RRRRS     
Sbjct: 312 ARRRRSPSPPARRRRSPSPPARSRRSPSPPARSRRSPSPPARRRRSPVPFRRRRSPSPPA 371

Query: 184 -RWWTPSSAASSRRARLVLTTRARGSC--RRTSARARRR*LTT---PSPRPWLVSTPCPP 345
            R  +PS      R+R  L  R R     R  S  ARRR  T    PSP P     P PP
Sbjct: 372 RRHRSPSPLYRRNRSRSPLAKRGRSDSQERSLSPVARRRGPTAARLPSP-PVGQRLPSPP 430

Query: 346 --AAGLRARRRLW----------PRRTSTWPRASTWCTSAPPLRRVCTRPSAPSR 474
              AGL +  R+           P  +S  P        +PP+RR  +   A  R
Sbjct: 431 PRRAGLPSPMRIGGSHPANHLDSPSPSSLSPPGGKNKLPSPPVRRRSSLTPAKER 485

[17][TOP]
>UniRef100_P33485 Probable nuclear antigen n=2 Tax=Suid herpesvirus 1 RepID=VNUA_SUHVK
          Length = 1733

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 47/126 (37%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
 Frame = -1

Query: 329  ETSHGRGDGVVNQRRRARALVRRQ----LPRARVVNTNLARRLEAALEGVHHRDRRRRLG 162
            E  HG G G V  R  A  ++  +    +P A V +  + RR+ A   G+  R  +R +G
Sbjct: 1305 EDGHGPGRGAVAGRGLADVVLVPEPLAGVPGAAVADAAVGRRVGAG-PGLPERGEQRPVG 1363

Query: 161  RRS---HRRLQGVGGEGRPS----GLRGREHARDGKGGSHGCGGGGG------GRRRRRA 21
            RR    H R   VGG   P+    GLRGR     G+GG  G GGGGG      G RRRR 
Sbjct: 1364 RRGPVGHEREVVVGGAALPARGPGGLRGR-----GRGGRGGGGGGGGRGPRGRGGRRRRR 1418

Query: 20   MRTQGG 3
             R   G
Sbjct: 1419 WRPGAG 1424