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[1][TOP]
>UniRef100_C6TJ02 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TJ02_SOYBN
Length = 190
Score = 100 bits (248), Expect = 7e-20
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY
Sbjct: 1 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 50
[2][TOP]
>UniRef100_B9SWZ0 Exosome complex exonuclease RRP41, putative n=1 Tax=Ricinus
communis RepID=B9SWZ0_RICCO
Length = 241
Score = 97.8 bits (242), Expect = 3e-19
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
MEYVSPEGLRLDGRRPMEMRQ+RA+IGAVSKADGSA+FEMGNTKVIAAVY
Sbjct: 1 MEYVSPEGLRLDGRRPMEMRQLRAQIGAVSKADGSAVFEMGNTKVIAAVY 50
[3][TOP]
>UniRef100_A5BIU1 Chromosome chr15 scaffold_40, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A5BIU1_VITVI
Length = 241
Score = 94.4 bits (233), Expect = 4e-18
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
ME+VSPEGLRLDGRRPMEMRQIR EIGAV+KADGSA FEMGNTKVIAAVY
Sbjct: 1 MEFVSPEGLRLDGRRPMEMRQIRGEIGAVAKADGSAFFEMGNTKVIAAVY 50
[4][TOP]
>UniRef100_B9I8T9 Predicted protein n=2 Tax=Populus RepID=B9I8T9_POPTR
Length = 241
Score = 94.0 bits (232), Expect = 5e-18
Identities = 44/50 (88%), Positives = 50/50 (100%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
ME+V+PEGLRLDGRRPMEMRQ+RA+IGAV+KADGSA+FEMGNTKVIAAVY
Sbjct: 1 MEFVNPEGLRLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVY 50
[5][TOP]
>UniRef100_Q9SP08 Exonuclease RRP41 n=1 Tax=Arabidopsis thaliana RepID=Q9SP08_ARATH
Length = 241
Score = 86.7 bits (213), Expect = 8e-16
Identities = 43/50 (86%), Positives = 46/50 (92%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
MEYV+PEGLRLDGRR EMRQI AE+G VSKADGSA+FEMGNTKVIAAVY
Sbjct: 1 MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVY 50
[6][TOP]
>UniRef100_A8J275 3'-5' exoribonuclease PH component of the exosome n=1
Tax=Chlamydomonas reinhardtii RepID=A8J275_CHLRE
Length = 245
Score = 78.6 bits (192), Expect = 2e-13
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
ME+VSPEGLRLDGRRP E+R+I ++ +S ADGSAIFEMGNTKV+AAV+
Sbjct: 1 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVF 50
[7][TOP]
>UniRef100_Q6K293 Putative exosome component 4 n=1 Tax=Oryza sativa Japonica Group
RepID=Q6K293_ORYSJ
Length = 245
Score = 77.0 bits (188), Expect = 6e-13
Identities = 36/51 (70%), Positives = 45/51 (88%), Gaps = 1/51 (1%)
Frame = +2
Query: 278 MEYVSP-EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
MEYV+P G R+DGRRP EMRQ++ E+G V++ADGSA+FEMGNT+VIAAVY
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVY 51
[8][TOP]
>UniRef100_C5YZ99 Putative uncharacterized protein Sb09g022550 n=1 Tax=Sorghum
bicolor RepID=C5YZ99_SORBI
Length = 242
Score = 77.0 bits (188), Expect = 6e-13
Identities = 36/51 (70%), Positives = 45/51 (88%), Gaps = 1/51 (1%)
Frame = +2
Query: 278 MEYVSP-EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
MEYV+P G R+DGRRP EMRQ++ E+G V++ADGSA+FEMGNT+VIAAVY
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVY 51
[9][TOP]
>UniRef100_B9G2C8 Putative uncharacterized protein n=2 Tax=Oryza sativa
RepID=B9G2C8_ORYSJ
Length = 242
Score = 77.0 bits (188), Expect = 6e-13
Identities = 36/51 (70%), Positives = 45/51 (88%), Gaps = 1/51 (1%)
Frame = +2
Query: 278 MEYVSP-EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
MEYV+P G R+DGRRP EMRQ++ E+G V++ADGSA+FEMGNT+VIAAVY
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVY 51
[10][TOP]
>UniRef100_B4FDA8 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FDA8_MAIZE
Length = 242
Score = 77.0 bits (188), Expect = 6e-13
Identities = 36/51 (70%), Positives = 45/51 (88%), Gaps = 1/51 (1%)
Frame = +2
Query: 278 MEYVSP-EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
MEYV+P G R+DGRRP EMRQ++ E+G V++ADGSA+FEMGNT+VIAAVY
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVY 51
[11][TOP]
>UniRef100_C5YVG7 Putative uncharacterized protein Sb09g028170 n=1 Tax=Sorghum
bicolor RepID=C5YVG7_SORBI
Length = 242
Score = 76.6 bits (187), Expect = 8e-13
Identities = 36/51 (70%), Positives = 45/51 (88%), Gaps = 1/51 (1%)
Frame = +2
Query: 278 MEYVSP-EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
MEYV+P G R+DGRRP EMRQ++ E+G V++ADGSA+FEMGNT+VIAAVY
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGIVARADGSALFEMGNTRVIAAVY 51
[12][TOP]
>UniRef100_B6T763 Exosome complex exonuclease RRP41 n=1 Tax=Zea mays
RepID=B6T763_MAIZE
Length = 242
Score = 75.9 bits (185), Expect = 1e-12
Identities = 36/51 (70%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
Frame = +2
Query: 278 MEYVSP-EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
MEYV+P G R+DGRRP EMRQ++ E+G V +ADGSA+FEMGNT+VIAAVY
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVVRADGSALFEMGNTRVIAAVY 51
[13][TOP]
>UniRef100_A9TY02 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9TY02_PHYPA
Length = 246
Score = 73.9 bits (180), Expect = 5e-12
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = +2
Query: 281 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
E+VSPEGLRLDGRRP EMR + A +G V ADGSA+F MGNT+V+A VY
Sbjct: 4 EFVSPEGLRLDGRRPPEMRHLHAVVGVVPSADGSALFHMGNTQVMAVVY 52
[14][TOP]
>UniRef100_Q54EU6 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum
RepID=Q54EU6_DICDI
Length = 247
Score = 72.8 bits (177), Expect = 1e-11
Identities = 32/51 (62%), Positives = 41/51 (80%)
Frame = +2
Query: 275 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
K+ Y+SPEGLR+DGRR E+R+I E+G +ADGSA +E GNTK+IAAVY
Sbjct: 3 KLSYISPEGLRIDGRRANELRRINVEMGIFKRADGSAYYEQGNTKIIAAVY 53
[15][TOP]
>UniRef100_C1EDA5 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EDA5_9CHLO
Length = 261
Score = 72.4 bits (176), Expect = 1e-11
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
MEYVS EGLRLDGRRP E R++R E+ A+ +DGSA+FE+GNTKV+AAV+
Sbjct: 1 MEYVSLEGLRLDGRRPKETRRMRCELTALPGSDGSAVFELGNTKVLAAVH 50
[16][TOP]
>UniRef100_Q975G8 Probable exosome complex exonuclease 1 n=1 Tax=Sulfolobus tokodaii
RepID=ECX1_SULTO
Length = 247
Score = 70.1 bits (170), Expect = 7e-11
Identities = 34/51 (66%), Positives = 39/51 (76%)
Frame = +2
Query: 275 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
K + GLRLDGR+P EMR I+ E+G + ADGSAIFEMGNTKVIAAVY
Sbjct: 10 KPRLILDNGLRLDGRKPDEMRPIKIELGVLKNADGSAIFEMGNTKVIAAVY 60
[17][TOP]
>UniRef100_B4KHM2 GI10716 n=1 Tax=Drosophila mojavensis RepID=B4KHM2_DROMO
Length = 249
Score = 66.2 bits (160), Expect = 1e-09
Identities = 30/51 (58%), Positives = 39/51 (76%)
Frame = +2
Query: 275 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+ME +S +GLRLDGRRP E+R I+ ++G + DGSA E GNTKV+AAVY
Sbjct: 4 RMELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVY 54
[18][TOP]
>UniRef100_B4JCT4 GH10637 n=1 Tax=Drosophila grimshawi RepID=B4JCT4_DROGR
Length = 249
Score = 66.2 bits (160), Expect = 1e-09
Identities = 30/51 (58%), Positives = 39/51 (76%)
Frame = +2
Query: 275 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+ME +S +GLRLDGRRP E+R I+ ++G + DGSA E GNTKV+AAVY
Sbjct: 4 RMELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVY 54
[19][TOP]
>UniRef100_C1MWG2 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MWG2_9CHLO
Length = 245
Score = 65.9 bits (159), Expect = 1e-09
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
MEYVS EGLRLDGRRP E RQ+R +G + ADGSA F GNT+V+ AV+
Sbjct: 1 MEYVSLEGLRLDGRRPKETRQMRCAMGVLPAADGSAEFRAGNTRVMCAVH 50
[20][TOP]
>UniRef100_B3RL48 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3RL48_TRIAD
Length = 243
Score = 65.9 bits (159), Expect = 1e-09
Identities = 28/49 (57%), Positives = 38/49 (77%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAV 424
ME +SPEGLR+DGRRP E+R+ +G +S+ADGSA E GNTK +A++
Sbjct: 1 MEIISPEGLRIDGRRPEEIRRFNCRLGVLSRADGSAYLEQGNTKALASI 49
[21][TOP]
>UniRef100_B4P324 GE11809 n=1 Tax=Drosophila yakuba RepID=B4P324_DROYA
Length = 246
Score = 65.5 bits (158), Expect = 2e-09
Identities = 30/51 (58%), Positives = 39/51 (76%)
Frame = +2
Query: 275 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
K E +S +GLRLDGRRP E+R+I+ ++G + DGSA E GNTKV+AAVY
Sbjct: 4 KYELLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVY 54
[22][TOP]
>UniRef100_B3NB10 GG10219 n=1 Tax=Drosophila erecta RepID=B3NB10_DROER
Length = 246
Score = 65.5 bits (158), Expect = 2e-09
Identities = 30/51 (58%), Positives = 39/51 (76%)
Frame = +2
Query: 275 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
K E +S +GLRLDGRRP E+R+I+ ++G + DGSA E GNTKV+AAVY
Sbjct: 4 KYELLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVY 54
[23][TOP]
>UniRef100_Q16KB4 Exosome complex exonuclease RRP41, putative n=1 Tax=Aedes aegypti
RepID=Q16KB4_AEDAE
Length = 245
Score = 65.1 bits (157), Expect = 2e-09
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
ME +S EGLRLDGRR E+R+I+ ++G S+ DGSA E GNTKV+AAVY
Sbjct: 1 MELLSDEGLRLDGRRANELRRIQCKLGVFSQPDGSAYIEQGNTKVLAAVY 50
[24][TOP]
>UniRef100_B4M9A1 GJ18275 n=1 Tax=Drosophila virilis RepID=B4M9A1_DROVI
Length = 249
Score = 64.7 bits (156), Expect = 3e-09
Identities = 29/51 (56%), Positives = 39/51 (76%)
Frame = +2
Query: 275 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
++E +S +GLRLDGRRP E+R I+ ++G + DGSA E GNTKV+AAVY
Sbjct: 4 RIELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVY 54
[25][TOP]
>UniRef100_B0XII7 Exosome complex exonuclease RRP41 n=1 Tax=Culex quinquefasciatus
RepID=B0XII7_CULQU
Length = 245
Score = 64.7 bits (156), Expect = 3e-09
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
ME +S EGLRLDGRR E+R+I+ ++G S+ DGSA E GNTKV+AAVY
Sbjct: 1 MELLSDEGLRLDGRRSNELRRIQCKLGVFSQPDGSAYVEQGNTKVLAAVY 50
[26][TOP]
>UniRef100_A7S1D9 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7S1D9_NEMVE
Length = 247
Score = 64.7 bits (156), Expect = 3e-09
Identities = 28/50 (56%), Positives = 40/50 (80%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+E +SPEGLR+DGR+ E+R++ ++G +S+ADGSA EMGNTK +A VY
Sbjct: 4 LEVLSPEGLRIDGRKASELRKMVCKVGVLSQADGSAYIEMGNTKALATVY 53
[27][TOP]
>UniRef100_C3N5R3 Exosome complex exonuclease 1 n=1 Tax=Sulfolobus islandicus M.16.27
RepID=C3N5R3_SULIA
Length = 245
Score = 64.7 bits (156), Expect = 3e-09
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = +2
Query: 296 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+G R+DGR+P E+R I+ E+G + ADGSAIFEMGNTK IAAVY
Sbjct: 13 DGKRIDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVY 56
[28][TOP]
>UniRef100_C3MVG4 Exosome complex exonuclease 1 n=2 Tax=Sulfolobus islandicus
RepID=C3MVG4_SULIM
Length = 245
Score = 64.7 bits (156), Expect = 3e-09
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = +2
Query: 296 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+G R+DGR+P E+R I+ E+G + ADGSAIFEMGNTK IAAVY
Sbjct: 13 DGKRIDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVY 56
[29][TOP]
>UniRef100_C3MQ46 Exosome complex exonuclease 1 n=3 Tax=Sulfolobus islandicus
RepID=C3MQ46_SULIL
Length = 245
Score = 64.7 bits (156), Expect = 3e-09
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = +2
Query: 296 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+G R+DGR+P E+R I+ E+G + ADGSAIFEMGNTK IAAVY
Sbjct: 13 DGKRIDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVY 56
[30][TOP]
>UniRef100_UPI000186CE6C Exosome complex exonuclease RRP41, putative n=1 Tax=Pediculus
humanus corporis RepID=UPI000186CE6C
Length = 253
Score = 64.3 bits (155), Expect = 4e-09
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = +2
Query: 287 VSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+S + LRLDGRR E+RQIR ++G S+ DGSA EMGNTKV+AAVY
Sbjct: 5 ISDQNLRLDGRRASELRQIRCKLGVFSQPDGSAYIEMGNTKVLAAVY 51
[31][TOP]
>UniRef100_Q9VK19 FI07225p n=1 Tax=Drosophila melanogaster RepID=Q9VK19_DROME
Length = 246
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/51 (56%), Positives = 39/51 (76%)
Frame = +2
Query: 275 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
K + +S +GLRLDGRRP E+R+I+ ++G + DGSA E GNTKV+AAVY
Sbjct: 4 KYDLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVY 54
[32][TOP]
>UniRef100_Q8SYC8 RE67757p n=1 Tax=Drosophila melanogaster RepID=Q8SYC8_DROME
Length = 246
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/51 (56%), Positives = 39/51 (76%)
Frame = +2
Query: 275 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
K + +S +GLRLDGRRP E+R+I+ ++G + DGSA E GNTKV+AAVY
Sbjct: 4 KYDLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVY 54
[33][TOP]
>UniRef100_B4IEH2 GM25757 n=1 Tax=Drosophila sechellia RepID=B4IEH2_DROSE
Length = 246
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/51 (56%), Positives = 39/51 (76%)
Frame = +2
Query: 275 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
K + +S +GLRLDGRRP E+R+I+ ++G + DGSA E GNTKV+AAVY
Sbjct: 4 KYDLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVY 54
[34][TOP]
>UniRef100_UPI0001923A5C PREDICTED: similar to putative exosome complex exonuclease RRP41
n=1 Tax=Hydra magnipapillata RepID=UPI0001923A5C
Length = 244
Score = 63.5 bits (153), Expect = 7e-09
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
++ VSPEGLR DGR+ E+R+I A+ G S+ADGSA E GNTKVIA+VY
Sbjct: 4 LDLVSPEGLRFDGRKCHELRKITAKKGIFSQADGSAYIEQGNTKVIASVY 53
[35][TOP]
>UniRef100_UPI00006A4B1C PREDICTED: similar to LOC495942 protein n=1 Tax=Ciona intestinalis
RepID=UPI00006A4B1C
Length = 247
Score = 63.5 bits (153), Expect = 7e-09
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = +2
Query: 281 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
E +S EG R DGR+P E+R++R +G ++ADGSA E GNTKV+AA+Y
Sbjct: 5 ELISDEGYRFDGRKPSELRRVRCNMGVFTQADGSAYIEQGNTKVLAAIY 53
[36][TOP]
>UniRef100_B4MX14 GK15569 n=1 Tax=Drosophila willistoni RepID=B4MX14_DROWI
Length = 251
Score = 63.5 bits (153), Expect = 7e-09
Identities = 29/49 (59%), Positives = 37/49 (75%)
Frame = +2
Query: 281 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
E +S +GLRLDGRRP E+R I+ ++G + DGSA E GNTKV+AAVY
Sbjct: 6 ELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVY 54
[37][TOP]
>UniRef100_Q29KH8 GA13761 n=2 Tax=pseudoobscura subgroup RepID=Q29KH8_DROPS
Length = 249
Score = 63.5 bits (153), Expect = 7e-09
Identities = 29/49 (59%), Positives = 37/49 (75%)
Frame = +2
Query: 281 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
E +S +GLRLDGRRP E+R I+ ++G + DGSA E GNTKV+AAVY
Sbjct: 6 ELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVY 54
[38][TOP]
>UniRef100_Q9UXC2 Probable exosome complex exonuclease 1 n=2 Tax=Sulfolobus
solfataricus RepID=ECX1_SULSO
Length = 248
Score = 63.5 bits (153), Expect = 7e-09
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +2
Query: 296 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+G R DGR+P E+R I+ E+G + ADGSAIFEMGNTK IAAVY
Sbjct: 16 DGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVY 59
[39][TOP]
>UniRef100_Q4JB27 Probable exosome complex exonuclease 1 n=1 Tax=Sulfolobus
acidocaldarius RepID=ECX1_SULAC
Length = 243
Score = 63.5 bits (153), Expect = 7e-09
Identities = 31/51 (60%), Positives = 38/51 (74%)
Frame = +2
Query: 275 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
K + + GLR DGR+ E+R I+ E+G + ADGSAIFEMGNTKVIAAVY
Sbjct: 6 KPKLILENGLRTDGRKLDELRPIKIELGVLKNADGSAIFEMGNTKVIAAVY 56
[40][TOP]
>UniRef100_C1BN11 Exosome complex exonuclease RRP41 n=1 Tax=Caligus rogercresseyi
RepID=C1BN11_9MAXI
Length = 246
Score = 63.2 bits (152), Expect = 9e-09
Identities = 32/51 (62%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVS-KADGSAIFEMGNTKVIAAVY 427
ME +S +GLRLDGR+ E+R++R +GA S ADGSA EMGNTKV+AAVY
Sbjct: 1 MELLSDQGLRLDGRKSDELRRLRCRLGAFSWSADGSAYLEMGNTKVLAAVY 51
[41][TOP]
>UniRef100_B3MN36 GF15621 n=1 Tax=Drosophila ananassae RepID=B3MN36_DROAN
Length = 249
Score = 63.2 bits (152), Expect = 9e-09
Identities = 29/49 (59%), Positives = 37/49 (75%)
Frame = +2
Query: 281 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
E +S +GLRLDGRRP E+R I+ ++G + DGSA E GNTKV+AAVY
Sbjct: 6 ELLSEQGLRLDGRRPHELRHIQCKLGVFEQPDGSAYMEQGNTKVLAAVY 54
[42][TOP]
>UniRef100_A4YCV2 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Metallosphaera
sedula DSM 5348 RepID=A4YCV2_METS5
Length = 245
Score = 62.0 bits (149), Expect = 2e-08
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +2
Query: 275 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
K + + +G RLDGRRP E+R ++ EIG + ADGS++ E+GNTK+IAAVY
Sbjct: 6 KPKLILDDGRRLDGRRPDELRPMKMEIGVLKNADGSSLVEVGNTKIIAAVY 56
[43][TOP]
>UniRef100_B7P8R1 Exosomal 3'-5' exoribonuclease complex, subunit Rrp41, putative n=1
Tax=Ixodes scapularis RepID=B7P8R1_IXOSC
Length = 246
Score = 61.6 bits (148), Expect = 3e-08
Identities = 29/50 (58%), Positives = 36/50 (72%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+E +S EG RLDGR+P E R+I +G S+ADGSA E GN KV+AAVY
Sbjct: 4 LELLSDEGYRLDGRKPNEQRKIDCRLGVFSQADGSAYIEQGNAKVLAAVY 53
[44][TOP]
>UniRef100_C4M2G1 3' exoribonuclease family protein n=1 Tax=Entamoeba histolytica
HM-1:IMSS RepID=C4M2G1_ENTHI
Length = 238
Score = 60.8 bits (146), Expect = 4e-08
Identities = 31/50 (62%), Positives = 35/50 (70%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
MEY+SPEG RLDGRR EMR+ EI +S ADGSA MGNT V A V+
Sbjct: 1 MEYISPEGYRLDGRRTTEMRKCEMEINFLSTADGSARVRMGNTIVEAVVF 50
[45][TOP]
>UniRef100_UPI000179264C PREDICTED: similar to exosome complex exonuclease RRP41, partial
n=1 Tax=Acyrthosiphon pisum RepID=UPI000179264C
Length = 122
Score = 60.1 bits (144), Expect = 8e-08
Identities = 27/50 (54%), Positives = 38/50 (76%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
M+ +S +GLR DGRR E+R+IR ++G ++ DGSA E GNTKV+AA+Y
Sbjct: 1 MDLLSRQGLRTDGRRSGELRRIRCKMGVFNQPDGSAYLEQGNTKVVAAIY 50
[46][TOP]
>UniRef100_C4WSG4 ACYPI001085 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSG4_ACYPI
Length = 213
Score = 60.1 bits (144), Expect = 8e-08
Identities = 27/50 (54%), Positives = 38/50 (76%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
M+ +S +GLR DGRR E+R+IR ++G ++ DGSA E GNTKV+AA+Y
Sbjct: 1 MDLLSRQGLRTDGRRSGELRRIRCKMGVFNQPDGSAYLEQGNTKVVAAIY 50
[47][TOP]
>UniRef100_UPI00003608A8 UPI00003608A8 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00003608A8
Length = 245
Score = 59.3 bits (142), Expect = 1e-07
Identities = 26/50 (52%), Positives = 38/50 (76%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+E +S +G R+DGR+ E+R+I+A +G ++ADGSA E GNTKV+A VY
Sbjct: 4 LELLSDQGYRIDGRKATELRKIQARMGVFAQADGSAYLEQGNTKVLAVVY 53
[48][TOP]
>UniRef100_Q5PQ94 LOC495942 protein n=1 Tax=Xenopus laevis RepID=Q5PQ94_XENLA
Length = 249
Score = 59.3 bits (142), Expect = 1e-07
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
ME +S +G R+DGR+ E+R+IRA +G ++ADGSA E GNTK +A VY
Sbjct: 4 MELLSDQGYRVDGRKAGELRKIRARMGVFAQADGSAYIEQGNTKALAVVY 53
[49][TOP]
>UniRef100_Q8TYC1 Probable exosome complex exonuclease 1 n=1 Tax=Methanopyrus
kandleri RepID=ECX1_METKA
Length = 239
Score = 58.9 bits (141), Expect = 2e-07
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = +2
Query: 287 VSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+S +GLRLDGR+P EMR ++ + G + +ADGSA E+G K++AAVY
Sbjct: 9 ISEDGLRLDGRKPDEMRPLKIQAGVLKRADGSAYLELGANKIVAAVY 55
[50][TOP]
>UniRef100_UPI0000EDBA5C PREDICTED: similar to Chain C, Structure Of The Human Rna Exosome
Composed Of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42,
Csl4, Rrp4, And Rrp40 n=1 Tax=Ornithorhynchus anatinus
RepID=UPI0000EDBA5C
Length = 245
Score = 58.5 bits (140), Expect = 2e-07
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+E +S EG R+DGRR E+R+I A +G ++ADGSA E GNTK +A VY
Sbjct: 4 LELLSDEGYRVDGRRAGELRKIEARMGVFAQADGSAYIEQGNTKALAVVY 53
[51][TOP]
>UniRef100_B0ERA1 Exosome complex exonuclease RRP41, putative n=1 Tax=Entamoeba
dispar SAW760 RepID=B0ERA1_ENTDI
Length = 238
Score = 58.5 bits (140), Expect = 2e-07
Identities = 29/50 (58%), Positives = 35/50 (70%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
MEY+SPEG RLDGRR EMR+ EI ++ +DGSA MGNT V A V+
Sbjct: 1 MEYISPEGYRLDGRRTTEMRKCEMEINFLNTSDGSARVRMGNTIVEAVVF 50
[52][TOP]
>UniRef100_UPI0000DB6F09 PREDICTED: similar to putative exosome complex exonuclease RRP41
n=1 Tax=Apis mellifera RepID=UPI0000DB6F09
Length = 268
Score = 58.2 bits (139), Expect = 3e-07
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = +2
Query: 299 GLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
GLRLDGRR +E+RQIR ++G +ADGSA E GNTK++ VY
Sbjct: 12 GLRLDGRRALELRQIRIKMGVFGQADGSAYIEHGNTKILVTVY 54
[53][TOP]
>UniRef100_UPI00001CFD4D exosome component 4 n=1 Tax=Rattus norvegicus RepID=UPI00001CFD4D
Length = 245
Score = 58.2 bits (139), Expect = 3e-07
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+E +S +G R+DGRR E+R+I+A +G ++ADGSA E GNTK +A VY
Sbjct: 4 LELLSDQGYRIDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVY 53
[54][TOP]
>UniRef100_Q28H58 Exosome component 4 n=1 Tax=Xenopus (Silurana) tropicalis
RepID=Q28H58_XENTR
Length = 249
Score = 58.2 bits (139), Expect = 3e-07
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+E +S +G R+DGR+ E+R+IRA +G ++ADGSA E GNTK +A VY
Sbjct: 4 LELLSDQGYRVDGRKAGELRKIRARMGVFAQADGSAYIEQGNTKALAVVY 53
[55][TOP]
>UniRef100_B5X813 Exosome complex exonuclease RRP41 n=1 Tax=Salmo salar
RepID=B5X813_SALSA
Length = 245
Score = 58.2 bits (139), Expect = 3e-07
Identities = 25/50 (50%), Positives = 37/50 (74%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+E +S +G RLDGR+ E+R+++A +G ++ADGSA E GNTK +A VY
Sbjct: 4 LELLSDQGYRLDGRKAAELRKVQARMGVFAQADGSAYIEQGNTKALAVVY 53
[56][TOP]
>UniRef100_Q921I9 Exosome complex exonuclease RRP41 n=2 Tax=Mus musculus
RepID=EXOS4_MOUSE
Length = 245
Score = 58.2 bits (139), Expect = 3e-07
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+E +S +G R+DGRR E+R+I+A +G ++ADGSA E GNTK +A VY
Sbjct: 4 LELLSDQGYRIDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVY 53
[57][TOP]
>UniRef100_UPI0001862F93 hypothetical protein BRAFLDRAFT_218985 n=1 Tax=Branchiostoma
floridae RepID=UPI0001862F93
Length = 244
Score = 57.8 bits (138), Expect = 4e-07
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+E +S +G R+DGRR E+R++ A +G ++ADGSA E GNTK +A VY
Sbjct: 4 LEIISDQGYRIDGRRSSELRKVCARMGVFTQADGSAYIEQGNTKALATVY 53
[58][TOP]
>UniRef100_UPI00017968DC PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal
RNA-processing protein 41) (Exosome component 4) (p12A)
n=1 Tax=Equus caballus RepID=UPI00017968DC
Length = 245
Score = 57.8 bits (138), Expect = 4e-07
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+E +S +G R+DGRR E+R+I+A +G ++ADGSA E GNTK +A VY
Sbjct: 4 LELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVY 53
[59][TOP]
>UniRef100_UPI00015B5B6C PREDICTED: similar to ENSANGP00000009222 n=1 Tax=Nasonia
vitripennis RepID=UPI00015B5B6C
Length = 270
Score = 57.8 bits (138), Expect = 4e-07
Identities = 26/46 (56%), Positives = 33/46 (71%)
Frame = +2
Query: 290 SPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
S GLR DGRRP+E+R+IR +G +ADGSA E G TK++A VY
Sbjct: 8 SQGGLRADGRRPLELRRIRLRMGVFGQADGSAYLEQGKTKILATVY 53
[60][TOP]
>UniRef100_UPI00005EC0D3 PREDICTED: similar to Chain G, Structure Of The Human Rna Exosome
Composed Of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42,
Csl4, Rrp4, And Rrp40 n=1 Tax=Monodelphis domestica
RepID=UPI00005EC0D3
Length = 245
Score = 57.8 bits (138), Expect = 4e-07
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+E +S +G R+DGRR E+R+I+A +G ++ADGSA E GNTK +A VY
Sbjct: 4 LELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVY 53
[61][TOP]
>UniRef100_UPI00005A29C8 PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal
RNA processing protein 41) (Exosome component 4) (p12A)
isoform 5 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A29C8
Length = 238
Score = 57.8 bits (138), Expect = 4e-07
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+E +S +G R+DGRR E+R+I+A +G ++ADGSA E GNTK +A VY
Sbjct: 4 LELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVY 53
[62][TOP]
>UniRef100_UPI00005A29C7 PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal
RNA processing protein 41) (Exosome component 4) (p12A)
isoform 4 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A29C7
Length = 244
Score = 57.8 bits (138), Expect = 4e-07
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+E +S +G R+DGRR E+R+I+A +G ++ADGSA E GNTK +A VY
Sbjct: 4 LELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVY 53
[63][TOP]
>UniRef100_UPI00017B08EC UPI00017B08EC related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B08EC
Length = 245
Score = 57.8 bits (138), Expect = 4e-07
Identities = 25/50 (50%), Positives = 37/50 (74%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+E +S +G R+DGR+ E+R+I+A +G ++ADGSA E GNTK +A VY
Sbjct: 4 LELLSDQGYRIDGRKATELRKIQARMGVFAQADGSAYLEQGNTKALAVVY 53
[64][TOP]
>UniRef100_UPI00004A57C5 PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal
RNA processing protein 41) (Exosome component 4) (p12A)
isoform 1 n=1 Tax=Canis lupus familiaris
RepID=UPI00004A57C5
Length = 245
Score = 57.8 bits (138), Expect = 4e-07
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+E +S +G R+DGRR E+R+I+A +G ++ADGSA E GNTK +A VY
Sbjct: 4 LELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVY 53
[65][TOP]
>UniRef100_Q4SLK0 Chromosome 15 SCAF14556, whole genome shotgun sequence n=1
Tax=Tetraodon nigroviridis RepID=Q4SLK0_TETNG
Length = 291
Score = 57.8 bits (138), Expect = 4e-07
Identities = 25/50 (50%), Positives = 37/50 (74%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+E +S +G R+DGR+ E+R+I+A +G ++ADGSA E GNTK +A VY
Sbjct: 4 LELLSDQGYRIDGRKATELRKIQARMGVFAQADGSAYLEQGNTKALAVVY 53
[66][TOP]
>UniRef100_C1BWS7 Exosome complex exonuclease RRP41 n=1 Tax=Esox lucius
RepID=C1BWS7_ESOLU
Length = 245
Score = 57.8 bits (138), Expect = 4e-07
Identities = 25/50 (50%), Positives = 37/50 (74%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+E +S +G RLDGR+ E+R+++A +G ++ADGSA E GNTK +A VY
Sbjct: 4 VELLSDQGYRLDGRKATELRKVQARMGVFAQADGSAYIEQGNTKALAVVY 53
[67][TOP]
>UniRef100_C3XU58 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3XU58_BRAFL
Length = 246
Score = 57.8 bits (138), Expect = 4e-07
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+E +S +G R+DGRR E+R++ A +G ++ADGSA E GNTK +A VY
Sbjct: 4 LEIISDQGYRIDGRRSSELRKVCARMGVFTQADGSAYIEQGNTKALATVY 53
[68][TOP]
>UniRef100_Q9NPD3 Exosome complex exonuclease RRP41 n=1 Tax=Homo sapiens
RepID=EXOS4_HUMAN
Length = 245
Score = 57.8 bits (138), Expect = 4e-07
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+E +S +G R+DGRR E+R+I+A +G ++ADGSA E GNTK +A VY
Sbjct: 4 LELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVY 53
[69][TOP]
>UniRef100_Q7YRA3 Exosome complex exonuclease RRP41 n=1 Tax=Bos taurus
RepID=EXOS4_BOVIN
Length = 245
Score = 57.8 bits (138), Expect = 4e-07
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+E +S +G R+DGRR E+R+I+A +G ++ADGSA E GNTK +A VY
Sbjct: 4 LELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVY 53
[70][TOP]
>UniRef100_Q12ZB7 Archaeal exosome complex RNA-binding protein n=1
Tax=Methanococcoides burtonii DSM 6242
RepID=Q12ZB7_METBU
Length = 343
Score = 57.4 bits (137), Expect = 5e-07
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
++++ GLRLDGRR E+R + E+G +S+ADGS E GN KV+AAVY
Sbjct: 6 VKFIDENGLRLDGRRVDEIRPMTVEMGVLSRADGSCYLEWGNNKVLAAVY 55
[71][TOP]
>UniRef100_B8D6B9 Probable exosome complex exonuclease 1 n=1 Tax=Desulfurococcus
kamchatkensis 1221n RepID=B8D6B9_DESK1
Length = 242
Score = 57.0 bits (136), Expect = 6e-07
Identities = 24/44 (54%), Positives = 34/44 (77%)
Frame = +2
Query: 296 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+GLR+DGR+P E+R +R +G + A+GSA+ E GNTK +AAVY
Sbjct: 10 DGLRIDGRKPEELRPVRIALGVLKNANGSALVEYGNTKALAAVY 53
[72][TOP]
>UniRef100_A3DMU9 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Staphylothermus
marinus F1 RepID=A3DMU9_STAMF
Length = 240
Score = 57.0 bits (136), Expect = 6e-07
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +2
Query: 287 VSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+ +GLR DGR+P E+R I+ ++G + ADGSA E G TKVIAAVY
Sbjct: 7 IREDGLRHDGRKPNELRPIKMDVGVLKNADGSAYVEYGGTKVIAAVY 53
[73][TOP]
>UniRef100_A8PTK4 Putative exosome complex exonuclease RRP41, putative n=1 Tax=Brugia
malayi RepID=A8PTK4_BRUMA
Length = 249
Score = 56.6 bits (135), Expect = 8e-07
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
M +S G R DGR+P ++R + ++G S+ADGSA E GNTKV+ AVY
Sbjct: 1 MSIISEHGFRQDGRKPHQIRNLNYKLGVYSQADGSAYLEQGNTKVLCAVY 50
[74][TOP]
>UniRef100_A0B8W3 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Methanosaeta
thermophila PT RepID=A0B8W3_METTP
Length = 245
Score = 56.6 bits (135), Expect = 8e-07
Identities = 26/44 (59%), Positives = 34/44 (77%)
Frame = +2
Query: 296 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+G+RLDGRR E+R I+ E+G + +ADGS EMG+ KVIAAVY
Sbjct: 9 DGIRLDGRRFDELRPIKMEVGVLKRADGSCYMEMGDNKVIAAVY 52
[75][TOP]
>UniRef100_B5IEJ8 Exosome complex exonuclease 1 n=1 Tax=Aciduliprofundum boonei T469
RepID=B5IEJ8_9EURY
Length = 243
Score = 56.6 bits (135), Expect = 8e-07
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
++ + GLR+DGR P ++R I+ E+G + +ADGSA E G K+IAAVY
Sbjct: 5 IKLIDDNGLRIDGRLPNQLRPIKMEVGVLKRADGSAFIEWGGNKIIAAVY 54
[76][TOP]
>UniRef100_A1RXQ6 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Thermofilum
pendens Hrk 5 RepID=A1RXQ6_THEPD
Length = 245
Score = 56.2 bits (134), Expect = 1e-06
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +2
Query: 287 VSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+ G R+DGR P EMR +R E G + ADGSA E+GN KV+AAVY
Sbjct: 10 IDENGRRVDGRLPDEMRPLRVEAGVLKNADGSAYVELGNNKVLAAVY 56
[77][TOP]
>UniRef100_Q6PBZ8 Exosc4 protein n=1 Tax=Danio rerio RepID=Q6PBZ8_DANRE
Length = 245
Score = 55.8 bits (133), Expect = 1e-06
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+E +S +G RLDGR+ E+R+++A + ++ADGSA E GNTK +A VY
Sbjct: 4 LELLSDQGYRLDGRKATELRKVQARMSVFAQADGSAYLEQGNTKALAVVY 53
[78][TOP]
>UniRef100_Q4Q1B7 Exosome complex exonuclease RRP41, putative n=1 Tax=Leishmania
major RepID=Q4Q1B7_LEIMA
Length = 246
Score = 55.8 bits (133), Expect = 1e-06
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +2
Query: 281 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
EYVSP GLRLDGRRP+E R++ G +S DGS +G +KV A V+
Sbjct: 6 EYVSPAGLRLDGRRPLEARRMDIAFGTLSACDGSCDITLGQSKVCACVF 54
[79][TOP]
>UniRef100_A4HPG8 Exosome complex exonuclease RRP41, putative n=1 Tax=Leishmania
braziliensis RepID=A4HPG8_LEIBR
Length = 246
Score = 55.1 bits (131), Expect = 2e-06
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +2
Query: 281 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
EYVSP GLRLDGRRP+E R++ G +S DGS +G +KV A+++
Sbjct: 6 EYVSPAGLRLDGRRPLEARRMDIVFGTLSACDGSCDITVGQSKVCASIF 54
[80][TOP]
>UniRef100_C5KIM5 Exosome complex exonuclease RRP41, putative n=1 Tax=Perkinsus
marinus ATCC 50983 RepID=C5KIM5_9ALVE
Length = 248
Score = 54.7 bits (130), Expect = 3e-06
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +2
Query: 275 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+ E+++ EG RLDGRRP E+R + +IG ADGSA + G TKV+A V+
Sbjct: 4 RQEFLTYEGFRLDGRRPNELRHLTLKIGDAPSADGSATLQQGLTKVVAHVF 54
[81][TOP]
>UniRef100_UPI0001758632 PREDICTED: similar to exosome complex exonuclease RRP41, putative
n=1 Tax=Tribolium castaneum RepID=UPI0001758632
Length = 249
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = +2
Query: 281 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
E +S GLR DGRR E+R+IR ++G ++ DGSA E G TKV+AAVY
Sbjct: 6 ELLSKIGLRQDGRRADELRRIRCKLGVFTEPDGSAYLEQGLTKVLAAVY 54
[82][TOP]
>UniRef100_Q649Q0 Ribonuclease PH n=1 Tax=uncultured archaeon GZfos34H10
RepID=Q649Q0_9ARCH
Length = 242
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +2
Query: 275 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
KME + +G RL GR E+R I+ E+G + +ADGS FE+GN KVIA VY
Sbjct: 5 KMELIK-DGKRLSGRGFEELRPIKIEVGVLKRADGSCYFELGNNKVIAGVY 54
[83][TOP]
>UniRef100_C5A2B9 Probable exosome complex exonuclease 1 n=1 Tax=Thermococcus
gammatolerans EJ3 RepID=ECX1_THEGJ
Length = 249
Score = 53.9 bits (128), Expect = 5e-06
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
++ + G R+DGRR E+R+I E+G + ADGSA E G K++AAVY
Sbjct: 8 LKLIDENGRRIDGRRKYELRKIHMEVGVLKNADGSAYIEWGKNKILAAVY 57
[84][TOP]
>UniRef100_A2BKC0 Probable exosome complex exonuclease 1 n=1 Tax=Hyperthermus
butylicus DSM 5456 RepID=ECX1_HYPBU
Length = 255
Score = 53.9 bits (128), Expect = 5e-06
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +2
Query: 302 LRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+R DGR P ++R IR E+G +S ADGSA+ E G T+VIAAVY
Sbjct: 24 IRHDGRLPEQLRPIRMEVGVLSNADGSALVEYGGTRVIAAVY 65
[85][TOP]
>UniRef100_A4ID90 Exosome complex exonuclease RRP41, putative n=1 Tax=Leishmania
infantum RepID=A4ID90_LEIIN
Length = 246
Score = 53.5 bits (127), Expect = 7e-06
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +2
Query: 281 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
EYVSP GLRLDGRRP+E R++ +S DGS +G +KV A V+
Sbjct: 6 EYVSPAGLRLDGRRPLEARRMDIAFSTLSACDGSCDITLGQSKVCACVF 54
[86][TOP]
>UniRef100_B1L6N7 Exosome complex exonuclease 1 n=1 Tax=Candidatus Korarchaeum
cryptofilum OPF8 RepID=B1L6N7_KORCO
Length = 248
Score = 53.5 bits (127), Expect = 7e-06
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +2
Query: 287 VSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
++ EG+R DGR P EMR I+ +G + KADGSA E G +++AAV+
Sbjct: 13 ITEEGIRTDGRLPHEMRPIKMMVGVLEKADGSAFVEWGGNRILAAVF 59
[87][TOP]
>UniRef100_Q17533 Putative exosome complex exonuclease RRP41 n=1 Tax=Caenorhabditis
elegans RepID=EXOS4_CAEEL
Length = 240
Score = 53.5 bits (127), Expect = 7e-06
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
M +S G R+DGRRP ++R I +G A+GS E GNTKV+ AVY
Sbjct: 1 MNIISEHGFRIDGRRPAQIRNINTRLGLNRNAEGSCYLEHGNTKVLCAVY 50
[88][TOP]
>UniRef100_A8WQQ5 Putative exosome complex exonuclease RRP41 n=2 Tax=Caenorhabditis
briggsae RepID=EXOS4_CAEBR
Length = 240
Score = 53.5 bits (127), Expect = 7e-06
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +2
Query: 278 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
M +S G R+DGRRP ++R I +G A+GS E GNTKV+ AVY
Sbjct: 1 MSIISEHGFRMDGRRPAQIRNINTRLGLNRNAEGSCYLEHGNTKVLCAVY 50
[89][TOP]
>UniRef100_Q647V6 Ribonuclease PH n=1 Tax=uncultured archaeon GZfos9D1
RepID=Q647V6_9ARCH
Length = 245
Score = 53.1 bits (126), Expect = 9e-06
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +2
Query: 296 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
+G RLDGR E+R I+ E+G + +ADGS E+GN KVIAAVY
Sbjct: 10 DGKRLDGRGFDELRPIKIEVGVLKRADGSCYLELGNNKVIAAVY 53
[90][TOP]
>UniRef100_Q8ZVM9 Probable exosome complex exonuclease 1 n=1 Tax=Pyrobaculum
aerophilum RepID=ECX1_PYRAE
Length = 246
Score = 50.1 bits (118), Expect(2) = 1e-05
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +2
Query: 299 GLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY 427
G+R DGR P +MR+++ +G VS ADGSA+ G T +AAVY
Sbjct: 12 GVRADGRTPDQMREVKIAVGVVSNADGSAMVSYGATTAVAAVY 54
Score = 22.7 bits (47), Expect(2) = 1e-05
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 256 PPLSKLEDGVRQPRRTP 306
PP+ L++GVR RTP
Sbjct: 4 PPVPLLQNGVRADGRTP 20