[UP]
[1][TOP]
>UniRef100_B9SC90 DNA polymerase n=1 Tax=Ricinus communis RepID=B9SC90_RICCO
Length = 1526
Score = 159 bits (401), Expect = 2e-37
Identities = 104/195 (53%), Positives = 124/195 (63%), Gaps = 25/195 (12%)
Frame = +2
Query: 5 DDEASRKRRTTRGPEATARSQALELLKACRGGGRRSDL-AGPQIKLENPIYDTVPEDEYN 181
D+ + RR TRGPEATAR+ ALE LKA R GGRRS+ AG IK+E PI+DTV ED+Y+
Sbjct: 4 DEPVTAARRRTRGPEATARASALERLKALRQGGRRSENGAGYDIKMETPIFDTVSEDDYD 63
Query: 182 ALPLAAKRREQAQDFIVDDDGLGYTLSSE-------------DESDG--ENLENPKWKKD 316
L A+RR +AQ FIVDDDGLGY E DESDG N +N +K
Sbjct: 64 KL--VAQRRLEAQGFIVDDDGLGYGDEGEEEDWSQAGLPPSSDESDGGETNNKNRSKRKK 121
Query: 317 HQPKRPSVS------SSSLSAAAA---GTQRLSSMFTSSNFKKKRDDKASESIVDDVIAE 469
+ K S +SSLSAAAA G QR+SSMFTS+ FK + + E+IVDDVIAE
Sbjct: 122 TEKKEKGKSKVIKKVNSSLSAAAAALMGKQRISSMFTSTVFKNRDKNLDCENIVDDVIAE 181
Query: 470 FAPDENDRLRRRRAK 514
FAPDENDR RRRR +
Sbjct: 182 FAPDENDRERRRRVQ 196
[2][TOP]
>UniRef100_UPI0001983B03 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001983B03
Length = 1491
Score = 153 bits (386), Expect = 1e-35
Identities = 107/198 (54%), Positives = 120/198 (60%), Gaps = 22/198 (11%)
Frame = +2
Query: 26 RRTTRGPEATA---RSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYNALPLA 196
RR +RG EATA R A + K GGRRSD G QIK+E+PIYDTV EDEY+ L
Sbjct: 11 RRRSRGAEATAPLGRPPASK--KPSARGGRRSDGVGFQIKVEDPIYDTVDEDEYD--KLV 66
Query: 197 AKRREQAQDFIVDDDGLGY-------------TLSSEDESDGENLENPKWKKDHQPKRPS 337
AKRRE+ + FIVDD+G GY S DESDGE E PK KK + P
Sbjct: 67 AKRREEFRGFIVDDNGSGYGDEGQEEDWSLAGVPPSSDESDGE-AERPKKKKTEKKDPPP 125
Query: 338 VSSSSLSAAAA--GTQRLSSMFTSSNFKKKRDDK----ASESIVDDVIAEFAPDENDRLR 499
S LSAAAA G QRLSSMFTSS FKK RDDK + +SIVDDVIAEFAPDE DR R
Sbjct: 126 KKPSPLSAAAAMMGKQRLSSMFTSSVFKKSRDDKVKGLSCDSIVDDVIAEFAPDEADRER 185
Query: 500 RRRAKPSADSIXASLVSG 553
RRR + S + V G
Sbjct: 186 RRRGQSGLVSGGRNFVPG 203
[3][TOP]
>UniRef100_A7PLB6 DNA polymerase n=1 Tax=Vitis vinifera RepID=A7PLB6_VITVI
Length = 1495
Score = 153 bits (386), Expect = 1e-35
Identities = 107/198 (54%), Positives = 120/198 (60%), Gaps = 22/198 (11%)
Frame = +2
Query: 26 RRTTRGPEATA---RSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYNALPLA 196
RR +RG EATA R A + K GGRRSD G QIK+E+PIYDTV EDEY+ L
Sbjct: 11 RRRSRGAEATAPLGRPPASK--KPSARGGRRSDGVGFQIKVEDPIYDTVDEDEYD--KLV 66
Query: 197 AKRREQAQDFIVDDDGLGY-------------TLSSEDESDGENLENPKWKKDHQPKRPS 337
AKRRE+ + FIVDD+G GY S DESDGE E PK KK + P
Sbjct: 67 AKRREEFRGFIVDDNGSGYGDEGQEEDWSLAGVPPSSDESDGE-AERPKKKKTEKKDPPP 125
Query: 338 VSSSSLSAAAA--GTQRLSSMFTSSNFKKKRDDK----ASESIVDDVIAEFAPDENDRLR 499
S LSAAAA G QRLSSMFTSS FKK RDDK + +SIVDDVIAEFAPDE DR R
Sbjct: 126 KKPSPLSAAAAMMGKQRLSSMFTSSVFKKSRDDKVKGLSCDSIVDDVIAEFAPDEADRER 185
Query: 500 RRRAKPSADSIXASLVSG 553
RRR + S + V G
Sbjct: 186 RRRGQSGLVSGGRNFVPG 203
[4][TOP]
>UniRef100_B8A6Y4 DNA polymerase n=1 Tax=Oryza sativa Indica Group RepID=B8A6Y4_ORYSI
Length = 1532
Score = 149 bits (377), Expect = 1e-34
Identities = 102/195 (52%), Positives = 124/195 (63%), Gaps = 26/195 (13%)
Frame = +2
Query: 2 ADDEASRKRRTTRGPEATARSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYN 181
AD AS +R RG EA ARS ALE L+A R GG R+ A Q+++E PIYDTV E++Y
Sbjct: 6 ADAGASGRRSRARGSEAVARSAALERLRAIRDGGARA-AAAVQVRIEAPIYDTVAEEDYA 64
Query: 182 ALPLAAKRREQAQDFIVDDDGLGYT--------------LSSEDESDGENLENPKWKKDH 319
AL A+RR+ A FIVDDDGLGY SS++ SDGE+ K K+
Sbjct: 65 AL--VARRRKDAGAFIVDDDGLGYADDGREEDWTHRTIHSSSDEGSDGEDGAPRKRKQPR 122
Query: 320 -QPKRP---SVSSSSLSAAAA--GTQRLSSMFTSSNFKKKRDDK------ASESIVDDVI 463
Q KRP S +++SLSAAAA G QRLSSMFTSS F+K D+ A++SIVDDVI
Sbjct: 123 PQSKRPPQQSAAAASLSAAAAMMGKQRLSSMFTSSVFRKPGSDRGRDSSLAADSIVDDVI 182
Query: 464 AEFAPDENDRLRRRR 508
AEFAPD+NDR RRR
Sbjct: 183 AEFAPDDNDREERRR 197
[5][TOP]
>UniRef100_O48653 DNA polymerase alpha catalytic subunit n=2 Tax=Oryza sativa
Japonica Group RepID=DPOLA_ORYSJ
Length = 1534
Score = 149 bits (377), Expect = 1e-34
Identities = 102/195 (52%), Positives = 124/195 (63%), Gaps = 26/195 (13%)
Frame = +2
Query: 2 ADDEASRKRRTTRGPEATARSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYN 181
AD AS +R RG EA ARS ALE L+A R GG R+ A Q+++E PIYDTV E++Y
Sbjct: 6 ADAGASGRRSRARGSEAVARSAALERLRAIRDGGARA-AAAVQVRIEAPIYDTVAEEDYA 64
Query: 182 ALPLAAKRREQAQDFIVDDDGLGYT--------------LSSEDESDGENLENPKWKKDH 319
AL A+RR+ A FIVDDDGLGY SS++ SDGE+ K K+
Sbjct: 65 AL--VARRRKDAGAFIVDDDGLGYADDGREEDWTHRTIHSSSDEGSDGEDGAPRKRKQPR 122
Query: 320 -QPKRP---SVSSSSLSAAAA--GTQRLSSMFTSSNFKKKRDDK------ASESIVDDVI 463
Q KRP S +++SLSAAAA G QRLSSMFTSS F+K D+ A++SIVDDVI
Sbjct: 123 PQSKRPPQQSAAAASLSAAAAMMGKQRLSSMFTSSVFRKPGSDRGRDSSLAADSIVDDVI 182
Query: 464 AEFAPDENDRLRRRR 508
AEFAPD+NDR RRR
Sbjct: 183 AEFAPDDNDREERRR 197
[6][TOP]
>UniRef100_B9EUV2 DNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9EUV2_ORYSJ
Length = 1523
Score = 142 bits (359), Expect = 1e-32
Identities = 99/196 (50%), Positives = 121/196 (61%), Gaps = 27/196 (13%)
Frame = +2
Query: 2 ADDEASRKRRTTRGPEATARSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYN 181
AD AS +R RG EA ARS ALE L+A R GG R+ A Q+++E PIYDTV E++Y
Sbjct: 6 ADAGASGRRSRARGSEAVARSAALERLRAIRDGGARA-AAAVQVRIEAPIYDTVAEEDYA 64
Query: 182 ALPLAAKRREQAQDFIVDDDGLGYT--------------LSSEDESDGEN---LENPKWK 310
AL A+RR+ A FIVDDDGLGY SS++ SDGE+ E
Sbjct: 65 AL--VARRRKDAGAFIVDDDGLGYADDGREEDWTHRTIHSSSDEGSDGEDGAPREAEAAA 122
Query: 311 KDHQPKRP--SVSSSSLSAAAA--GTQRLSSMFTSSNFKKKRDDK------ASESIVDDV 460
+ RP S +++SLSAAAA G QRLSSMFTSS F+K D+ A++SIVDDV
Sbjct: 123 SAVEAARPQQSAAAASLSAAAAMMGKQRLSSMFTSSVFRKPGSDRGRDSSLAADSIVDDV 182
Query: 461 IAEFAPDENDRLRRRR 508
IAEFAPD+NDR RRR
Sbjct: 183 IAEFAPDDNDREERRR 198
[7][TOP]
>UniRef100_C5XR76 DNA polymerase n=1 Tax=Sorghum bicolor RepID=C5XR76_SORBI
Length = 1541
Score = 135 bits (340), Expect = 2e-30
Identities = 87/191 (45%), Positives = 119/191 (62%), Gaps = 28/191 (14%)
Frame = +2
Query: 20 RKRRTTRGPEATARSQALELLKACRGGG-RRSDLAGPQIKLENPIYDTVPEDEYNALPLA 196
R R TRG EA+ R+ L+ L+A R G R SD+ Q+K++ PIYDTVPE+EYN L
Sbjct: 14 RTRTRTRGAEASGRAARLQQLRAVRNGEIRASDVI--QVKVDAPIYDTVPEEEYNVL--V 69
Query: 197 AKRREQAQDFIVDDDGLGYT-------------LSSEDESDGENLENPKWKKD------- 316
A+R+++A +FI+DDDGLGY SS DE + P+ +K
Sbjct: 70 ARRKKEAGEFIIDDDGLGYVDDGREEDWSHRALPSSSDEGSDDEDGAPRKRKQPRPPQAK 129
Query: 317 HQPKRPSVSSSSLSAAAAGT-QRLSSMFTSSNFKKKRDDK------ASESIVDDVIAEFA 475
QP++ + +++S SAAAA T Q++SS+FTSS FK+ D+ A++SIVDD+IAEFA
Sbjct: 130 RQPQQSAKAAASFSAAAAKTGQQISSLFTSSVFKRTGSDRTKSLALAADSIVDDIIAEFA 189
Query: 476 PDENDRLRRRR 508
PDENDR RRR
Sbjct: 190 PDENDREERRR 200
[8][TOP]
>UniRef100_Q9FHA3 DNA polymerase alpha catalytic subunit n=1 Tax=Arabidopsis thaliana
RepID=DPOLA_ARATH
Length = 1492
Score = 113 bits (283), Expect = 9e-24
Identities = 82/198 (41%), Positives = 111/198 (56%), Gaps = 28/198 (14%)
Frame = +2
Query: 5 DDEASRKRRTTRGPEATARSQALELLKACRGGGRRSDLAGP-QIKLENPIYDTVPEDEYN 181
D+ RR +RG EA++R LE LKA R GG RS G I+L+ PI+DTV ++EY+
Sbjct: 4 DNSTETGRRRSRGAEASSRKDTLERLKAIRQGGIRSASGGGYDIRLQKPIFDTVDDEEYD 63
Query: 182 ALPLAAKRREQAQDFIVDDDGLGYTLSSEDESDGENLENP-------------------- 301
A L ++RRE+A+ F+V +DG G L DE + E+ P
Sbjct: 64 A--LVSRRREEARGFVV-EDGEGGDLGYLDEGEEEDWSKPSGPESTDESDDGGRFSGRLK 120
Query: 302 -KWKKDHQPKRPSVS--SSSLSAAA--AGTQRLSSMFTSSNFKK-KRDDKAS-ESIVDDV 460
K K Q ++P V + +L AAA G RLSSMFTSS+FKK K DKA E I+D++
Sbjct: 121 KKKKGKEQTQQPQVKKVNPALKAAATITGEGRLSSMFTSSSFKKVKETDKAQYEGILDEI 180
Query: 461 IAEFAPDENDRLRRRRAK 514
IA+ PDE+DR + R K
Sbjct: 181 IAQVTPDESDRKKHTRRK 198
[9][TOP]
>UniRef100_A9TLA6 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TLA6_PHYPA
Length = 281
Score = 102 bits (254), Expect = 2e-20
Identities = 76/188 (40%), Positives = 115/188 (61%), Gaps = 26/188 (13%)
Frame = +2
Query: 29 RTTRG--PEATARSQALELLKACRG-GGRRSDLAGPQIKLENPIYDTVPEDEYNALPLAA 199
R TRG PEA+AR+ AL LK + GGRR + Q++ E+ IYD++ E +YN L L
Sbjct: 8 RRTRGVVPEASARAAALSELKKLKDEGGRRVN--NYQVREEDKIYDSLSEADYNLLVL-- 63
Query: 200 KRREQAQDFIVDDDGLGYTLSSEDE----------SDGENLENPKWKKDH----QPKRPS 337
KRRE+ ++F+V DDGLGY E+E S+ ++ + K KK + + P+
Sbjct: 64 KRREEVKNFVVADDGLGYADIGEEEDWNVDQYCGDSEDDDADTNKKKKKNADEVKKDAPN 123
Query: 338 VSSSSLSAAAA--GTQRLSSMFTSSN-----FKKKRDDKA--SESIVDDVIAEFAPDEND 490
+++LSAAA+ G QRL+SMFTS++ ++ RDDK +ESI+DDV+A+ + D+ D
Sbjct: 124 RKAAALSAAASLIGKQRLASMFTSASGIPSLGRRLRDDKGVNTESILDDVLADVSADDVD 183
Query: 491 RLRRRRAK 514
R R +R +
Sbjct: 184 REREKRRR 191
[10][TOP]
>UniRef100_B6JY90 DNA polymerase n=1 Tax=Schizosaccharomyces japonicus yFS275
RepID=B6JY90_SCHJY
Length = 1314
Score = 63.2 bits (152), Expect = 1e-08
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 16/185 (8%)
Frame = +2
Query: 35 TRGPEATARSQALELLKACRGGGRRSDLAGPQIKLENP-IYDTVPEDEYNALPLAAKRRE 211
+R +A+AR +AL L+A R G+ A ENP +YD+V EDEY + ++R
Sbjct: 27 SRSGKASAR-EALSQLRALRESGKTR--ASVYETEENPELYDSVDEDEYRRV---VRKRL 80
Query: 212 QAQDFIVDDDGLGYTLSSEDESDGENLENPKWKKDHQPKRPSVSSSSLSAAAAGTQRLSS 391
DF+VDD+G GY + DE N + + D K SSS AA QR+S+
Sbjct: 81 DEDDFVVDDNGAGYVENGYDEWGPRNPTSSDDEADENAKDRKKRSSS-QRLAAPEQRIST 139
Query: 392 MF---------TSSNFKKKRDDKASESIVDDVIAEFAPD------ENDRLRRRRAKPSAD 526
F T S+ +K+ D + ++ + D++ D + +L R PS
Sbjct: 140 FFKRKALAPPTTKSSSEKRADKRDDDAFLADILGAVDADVMTELPKKRKLNETRNPPSGT 199
Query: 527 SIXAS 541
S+ S
Sbjct: 200 SVRKS 204
[11][TOP]
>UniRef100_UPI000175832A PREDICTED: similar to DNA polymerase alpha 180kD CG6349-PA n=1
Tax=Tribolium castaneum RepID=UPI000175832A
Length = 1406
Score = 58.5 bits (140), Expect = 4e-07
Identities = 50/172 (29%), Positives = 77/172 (44%)
Frame = +2
Query: 5 DDEASRKRRTTRGPEATARSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYNA 184
+D+ S +R + +++ +++A E K + G R +LEN +YDTV E EY
Sbjct: 2 EDDTSERRPKRQKRDSSYKAKAFEKFKQLKSGLRNKYEVE---ELEN-VYDTVDEKEYTK 57
Query: 185 LPLAAKRREQAQDFIVDDDGLGYTLSSEDESDGENLENPKWKKDHQPKRPSVSSSSLSAA 364
L Q D+IVDDDG GY D D ++L++ K V A
Sbjct: 58 KVLD----RQDDDWIVDDDGSGYVEDGRDIFD-DDLDHASIAAASSKKNKGVKRKKNVAE 112
Query: 365 AAGTQRLSSMFTSSNFKKKRDDKASESIVDDVIAEFAPDENDRLRRRRAKPS 520
AG L + ++ KKK + K + DD +AE + N+ R +A S
Sbjct: 113 NAGRGNLQYLISNMPSKKKEEKKLDQ---DDDLAELLQEINETPRESKAATS 161
[12][TOP]
>UniRef100_B7ZRF3 DNA polymerase n=1 Tax=Xenopus laevis RepID=B7ZRF3_XENLA
Length = 1458
Score = 58.5 bits (140), Expect = 4e-07
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
Frame = +2
Query: 14 ASRKRRTTRGPEATARSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYNALPL 193
ASR RR E + R +ALE LK + G + +++ + IY+ V E EY+ L
Sbjct: 9 ASRSRREKT--EKSGRKEALERLKRAKAGEK----VKYEVEQVSSIYEEVDEAEYSKLV- 61
Query: 194 AAKRREQAQDFIVDDDGLGYT-----LSSEDESDGENLENPKWKKDHQPKRPSVSSSSLS 358
R Q D+IVDDDG GY + +D D ++ K K + +V SS+S
Sbjct: 62 ---RDRQDDDWIVDDDGTGYVEDGREIFDDDLEDNALADSGKGAKGAPKDKTNVKKSSVS 118
Query: 359 AAAAGTQRLSSMFTSSNFKKKRDDKASESIVDDVIAEFAPD 481
+ SMF +S KK DKA + DD++ + D
Sbjct: 119 K----PNNIKSMFMASAV-KKTTDKAVDLSKDDLLGDLLQD 154
[13][TOP]
>UniRef100_B1WBE2 DNA polymerase n=1 Tax=Xenopus laevis RepID=B1WBE2_XENLA
Length = 1458
Score = 58.5 bits (140), Expect = 4e-07
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
Frame = +2
Query: 14 ASRKRRTTRGPEATARSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYNALPL 193
ASR RR E + R +ALE LK + G + +++ + IY+ V E EY+ L
Sbjct: 9 ASRSRREKT--EKSGRKEALERLKRAKAGEK----VKYEVEQVSSIYEEVDEAEYSKLV- 61
Query: 194 AAKRREQAQDFIVDDDGLGYT-----LSSEDESDGENLENPKWKKDHQPKRPSVSSSSLS 358
R Q D+IVDDDG GY + +D D ++ K K + +V SS+S
Sbjct: 62 ---RDRQDDDWIVDDDGTGYVEDGREIFDDDLEDNALADSGKGAKGAPKDKTNVKKSSVS 118
Query: 359 AAAAGTQRLSSMFTSSNFKKKRDDKASESIVDDVIAEFAPD 481
+ SMF +S KK DKA + DD++ + D
Sbjct: 119 K----PNNIKSMFMASAV-KKTTDKAVDLSKDDLLGDLLQD 154
[14][TOP]
>UniRef100_Q9DE46 DNA polymerase alpha catalytic subunit n=1 Tax=Xenopus laevis
RepID=DPOLA_XENLA
Length = 1458
Score = 58.5 bits (140), Expect = 4e-07
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
Frame = +2
Query: 14 ASRKRRTTRGPEATARSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYNALPL 193
ASR RR E + R +ALE LK + G + +++ + IY+ V E EY+ L
Sbjct: 9 ASRSRREKT--EKSGRKEALERLKRAKAGEK----VKYEVEQVSSIYEEVDEAEYSKLV- 61
Query: 194 AAKRREQAQDFIVDDDGLGYT-----LSSEDESDGENLENPKWKKDHQPKRPSVSSSSLS 358
R Q D+IVDDDG GY + +D D ++ K K + +V SS+S
Sbjct: 62 ---RDRQDDDWIVDDDGTGYVEDGREIFDDDLEDNALADSGKGAKGAPKDKTNVKKSSVS 118
Query: 359 AAAAGTQRLSSMFTSSNFKKKRDDKASESIVDDVIAEFAPD 481
+ SMF +S KK DKA + DD++ + D
Sbjct: 119 K----PNNIKSMFMASAV-KKTTDKAVDLSKDDLLGDLLQD 154
[15][TOP]
>UniRef100_UPI0000567613 DNA polymerase alpha n=1 Tax=Danio rerio RepID=UPI0000567613
Length = 1389
Score = 57.4 bits (137), Expect = 8e-07
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Frame = +2
Query: 14 ASRKRRTTRGPEATARSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYNALPL 193
ASR RR + E R ALE LK + G + +++ IYD V E++Y+ +
Sbjct: 13 ASRSRREKK--EKVGRKSALEQLKRAKKGEK----VKYEVEEFTSIYDEVDEEQYSKIV- 65
Query: 194 AAKRREQAQDFIVDDDGLGYTLSSEDESDGENLENPKWKKDHQPKRPSVSSSSL-SAAAA 370
R Q D+I+DDDG GY + D E ++ K Q + S ++ ++ +
Sbjct: 66 ---RERQDDDWIIDDDGTGYVEDGREIFDEELDDDALGPKSKQAAKGGDSKKNVKKSSVS 122
Query: 371 GTQRLSSMFTSSNFKK---KRDDKASESIVDDVIAEFAPDEN 487
+ SMF +SN KK K D + + ++ D++ + +++
Sbjct: 123 KPNSIKSMFMNSNVKKPAEKHVDLSQDDLLGDILQDLHSEKS 164
[16][TOP]
>UniRef100_Q6DRM6 DNA polymerase (Fragment) n=1 Tax=Danio rerio RepID=Q6DRM6_DANRE
Length = 1389
Score = 57.4 bits (137), Expect = 8e-07
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Frame = +2
Query: 14 ASRKRRTTRGPEATARSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYNALPL 193
ASR RR + E R ALE LK + G + +++ IYD V E++Y+ +
Sbjct: 12 ASRSRREKK--EKVGRKSALEQLKRAKKGEK----VKYEVEEFTSIYDEVDEEQYSKIV- 64
Query: 194 AAKRREQAQDFIVDDDGLGYTLSSEDESDGENLENPKWKKDHQPKRPSVSSSSL-SAAAA 370
R Q D+I+DDDG GY + D E ++ K Q + S ++ ++ +
Sbjct: 65 ---RERQDDDWIIDDDGTGYVEDGREIFDEELDDDALGPKSKQAAKGGDSKKNVKKSSVS 121
Query: 371 GTQRLSSMFTSSNFKK---KRDDKASESIVDDVIAEFAPDEN 487
+ SMF +SN KK K D + + ++ D++ + +++
Sbjct: 122 KPNSIKSMFMNSNVKKPAEKHVDLSQDDLLGDILQDLHSEKS 163
[17][TOP]
>UniRef100_B7S421 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7S421_PHATR
Length = 361
Score = 57.4 bits (137), Expect = 8e-07
Identities = 39/105 (37%), Positives = 59/105 (56%)
Frame = +2
Query: 53 TARSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYNALPLAAKRREQAQDFIV 232
T R+ AL K R GGR D+ + +++ +YD V E EY AL A ++RE DF+V
Sbjct: 6 TQRALALRRFKE-RRGGRLDDVEDAEA-VDDDVYDVVDESEYRALVAARRQRE---DFVV 60
Query: 233 DDDGLGYTLSSEDESDGENLENPKWKKDHQPKRPSVSSSSLSAAA 367
DDDGLGY E E G+ ++ +++ KR +V ++L+ A
Sbjct: 61 DDDGLGYHDDGE-ERLGDEADHDDDDRNNARKRDAVGGAALTQKA 104
[18][TOP]
>UniRef100_UPI0001760EEF PREDICTED: polymerase (DNA directed), alpha n=1 Tax=Danio rerio
RepID=UPI0001760EEF
Length = 1470
Score = 57.0 bits (136), Expect = 1e-06
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 8/166 (4%)
Frame = +2
Query: 14 ASRKRRTTRGPEATARSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYNALPL 193
ASR RR + E R ALE LK + G + +++ IYD V E++Y+ +
Sbjct: 26 ASRSRREKK--EKVGRKSALEQLKRAKKGEK----VKYEVEEFTSIYDEVDEEQYSKIV- 78
Query: 194 AAKRREQAQDFIVDDDGLGYTLSSE---DESDGENLENPKWK--KDHQPKRPSVSSSSLS 358
R Q D+I+DDDG GY DE ++ PK + K + +V SS+S
Sbjct: 79 ---RERQDDDWIIDDDGTGYVEDGREIFDEELDDDALGPKSECGKTRGDSKKNVKKSSVS 135
Query: 359 AAAAGTQRLSSMFTSSNFKK---KRDDKASESIVDDVIAEFAPDEN 487
+ SMF +SN KK K D + + ++ D++ + + N
Sbjct: 136 K----PNSIKSMFMNSNVKKPAEKHVDLSQDDLLGDILQDLHSEVN 177
[19][TOP]
>UniRef100_UPI0000F2CC3F PREDICTED: similar to polymerase (DNA directed), alpha n=1
Tax=Monodelphis domestica RepID=UPI0000F2CC3F
Length = 1619
Score = 57.0 bits (136), Expect = 1e-06
Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 3/161 (1%)
Frame = +2
Query: 14 ASRKRRTTRGPEATARSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYNALPL 193
ASR RR + A R +ALE LK + G R +++ +YD V ED+Y+ +
Sbjct: 17 ASRSRREKKS--AKGRQEALERLKKAKAGERFKY----EVEDFTSVYDEVDEDQYSRMVQ 70
Query: 194 AAKRREQAQDFIVDDDGLGYTLSSEDESDGENLENPKW---KKDHQPKRPSVSSSSLSAA 364
A Q D+IVDDDG GY + D E L++ + KK K + A
Sbjct: 71 A----RQDDDWIVDDDGTGYVEDGREIFDDE-LDDDAFDVSKKGKGDKASKDKKNIKKAV 125
Query: 365 AAGTQRLSSMFTSSNFKKKRDDKASESIVDDVIAEFAPDEN 487
+ + SMF +S KK DK + DD++ + D N
Sbjct: 126 VSKPNNIKSMFMAS-AGKKTTDKVVDLSKDDLLGDILQDLN 165
[20][TOP]
>UniRef100_Q013X2 DNA polymerase n=1 Tax=Ostreococcus tauri RepID=Q013X2_OSTTA
Length = 1530
Score = 56.6 bits (135), Expect = 1e-06
Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 18/190 (9%)
Frame = +2
Query: 8 DEASRKRRTTRGPEATARSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYNAL 187
D +R + + E TAR + E + + R + A +EN +YD + ED Y AL
Sbjct: 3 DRRARSSKAAKALELTARLR--EQREGDKKRSRIDEAADEADAIEN-VYDELDEDAYRAL 59
Query: 188 PLAAKRREQAQDFIVDDDGLGYTLSSEDE----------SDGENLENPKWKKDHQPKRPS 337
AKRRE DF+V+D G GY E+E D E+ K K + K +
Sbjct: 60 --VAKRREAGVDFVVNDAGEGYDDLGEEEDWTTANPNYSDDEEDAPKAKGAKATEKKAKA 117
Query: 338 VSSSSLSAAAAGTQRLSSMFTSSNFKKKRDDKA-----SESIVDDVIAE---FAPDENDR 493
+ + A A + + M KKK+ D+ +++I++D+ AE F
Sbjct: 118 TADEKAAKANAKAKGNAGMLLGGVQKKKKLDEVAADADADAILEDIFAEVDMFNASTPAT 177
Query: 494 LRRRRAKPSA 523
+ RRA P A
Sbjct: 178 VLARRAAPVA 187
[21][TOP]
>UniRef100_A8J9T2 DNA polymerase n=1 Tax=Chlamydomonas reinhardtii RepID=A8J9T2_CHLRE
Length = 1114
Score = 56.2 bits (134), Expect = 2e-06
Identities = 33/84 (39%), Positives = 46/84 (54%)
Frame = +2
Query: 23 KRRTTRGPEATARSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYNALPLAAK 202
+R+ + A ALE L+A R GG + LA ++K E +YD V E +Y + K
Sbjct: 5 RRQPVQSSAAVKAKGALEQLRAARDGGLKRALAY-EVKEEAAVYDVVDEQQYAEI---VK 60
Query: 203 RREQAQDFIVDDDGLGYTLSSEDE 274
+R A DF+VDDDG GY ED+
Sbjct: 61 KRRDAGDFVVDDDGAGYHDIGEDD 84
[22][TOP]
>UniRef100_UPI00018618D1 hypothetical protein BRAFLDRAFT_278582 n=1 Tax=Branchiostoma
floridae RepID=UPI00018618D1
Length = 1475
Score = 55.8 bits (133), Expect = 2e-06
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 11/181 (6%)
Frame = +2
Query: 14 ASRKRRTTRGPEATARSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYNALPL 193
A+R RRT + + T R ALE LK + G + + +LEN +Y+ V EDEY+ +
Sbjct: 15 ATRSRRTRK--DKTGRLAALEKLKKVKKGEK---VKYEVDELEN-VYEEVNEDEYSDVV- 67
Query: 194 AAKRREQAQDFIVDDDGLGYT-----LSSEDESDGENLENPKWKKDHQPKRPSVSSSSL- 355
R Q D+I+DDDG GY + +D + G + + K KK P + + +
Sbjct: 68 ---RTRQEDDWIIDDDGSGYVEDGREIFDDDIAGGSDAPSAKDKKKTGPGQKKAAKPMVK 124
Query: 356 SAAAAGTQRLSSMFTSSNFKKKRDDK----ASESIVDDVIAEF-APDENDRLRRRRAKPS 520
+ SMF SS KK + +K + ++ D++ E A D R A+P
Sbjct: 125 KPVIKPNNSIMSMFQSSAAKKAKTEKDVKLDEDELLGDILQEMHAEDIQTTPPSRSARPP 184
Query: 521 A 523
A
Sbjct: 185 A 185
[23][TOP]
>UniRef100_UPI00005A5CFB PREDICTED: similar to DNA polymerase alpha catalytic subunit n=1
Tax=Canis lupus familiaris RepID=UPI00005A5CFB
Length = 1590
Score = 55.1 bits (131), Expect = 4e-06
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Frame = +2
Query: 14 ASRKRRTTRGPEATARSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYNALPL 193
+SR RR + R +ALE LK + G + +++ +Y+ V E++Y+ L
Sbjct: 24 SSRSRREKKSKRG--RQEALERLKRAKAGEKYKY----EVEDFTSVYEEVDEEQYSKLVQ 77
Query: 194 AAKRREQAQDFIVDDDGLGYTLSS----EDESDGENLENPKWKKDHQPKRPSVSSSSLSA 361
A Q D+IVDDDG+GY +D+ + + L++ + KD + R + A
Sbjct: 78 A----RQDDDWIVDDDGIGYVEDGREIFDDDLEDDALDSHEKGKDDK-ARTKDRRNVKKA 132
Query: 362 AAAGTQRLSSMFTSSNFKKKRDDKASESIVDDVIAEFAPDEN 487
A + SMF +S KK DKA + DD++ + D N
Sbjct: 133 AVTKPNNIKSMFIAS-AGKKTTDKAVDLSKDDLLGDILQDLN 173
[24][TOP]
>UniRef100_UPI000069E79C DNA polymerase alpha catalytic subunit (EC 2.7.7.7). n=1
Tax=Xenopus (Silurana) tropicalis RepID=UPI000069E79C
Length = 1416
Score = 55.1 bits (131), Expect = 4e-06
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Frame = +2
Query: 14 ASRKRRTTRGPEATARSQALELLKACRGGGRRSDLAGPQIKLE----NPIYDTVPEDEYN 181
ASR RR E + R +ALE LK + AG ++K E + IY+ V E++Y+
Sbjct: 9 ASRSRREKT--EKSGRKEALERLKRAK--------AGEKVKYEVEEISSIYEEVDEEQYS 58
Query: 182 ALPLAAKRREQAQDFIVDDDGLGYT-----LSSEDESDGENLENPKWKKDHQPKRPSVSS 346
+ R Q D+IVDDDG GY + +D D ++ K K + +V
Sbjct: 59 KIV----RDRQDDDWIVDDDGTGYVEDGREIFDDDLEDNALADSGKRAKGAPKDKSNVKK 114
Query: 347 SSLSAAAAGTQRLSSMFTSSNFKKKRDDKASESIVDDVIAEFAPD 481
SS+S + SMF +S K+ DK + DD++ + D
Sbjct: 115 SSVSK----PNNIKSMFMASAV-KRTTDKTVDLSKDDLLGDLLQD 154
[25][TOP]
>UniRef100_UPI0000EB48A9 DNA polymerase alpha catalytic subunit (EC 2.7.7.7). n=1 Tax=Canis
lupus familiaris RepID=UPI0000EB48A9
Length = 1357
Score = 55.1 bits (131), Expect = 4e-06
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Frame = +2
Query: 14 ASRKRRTTRGPEATARSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYNALPL 193
+SR RR + R +ALE LK + G + +++ +Y+ V E++Y+ L
Sbjct: 24 SSRSRREKKSKRG--RQEALERLKRAKAGEKYKY----EVEDFTSVYEEVDEEQYSKLVQ 77
Query: 194 AAKRREQAQDFIVDDDGLGYTLSS----EDESDGENLENPKWKKDHQPKRPSVSSSSLSA 361
A Q D+IVDDDG+GY +D+ + + L++ + KD + R + A
Sbjct: 78 A----RQDDDWIVDDDGIGYVEDGREIFDDDLEDDALDSHEKGKDDK-ARTKDRRNVKKA 132
Query: 362 AAAGTQRLSSMFTSSNFKKKRDDKASESIVDDVIAEFAPDEN 487
A + SMF +S KK DKA + DD++ + D N
Sbjct: 133 AVTKPNNIKSMFIAS-AGKKTTDKAVDLSKDDLLGDILQDLN 173
[26][TOP]
>UniRef100_UPI00017C40EB PREDICTED: polymerase (DNA directed), alpha 1 n=1 Tax=Bos taurus
RepID=UPI00017C40EB
Length = 1462
Score = 54.7 bits (130), Expect = 5e-06
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 4/162 (2%)
Frame = +2
Query: 14 ASRKRRTTRGPEATARSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYNALPL 193
ASR RR + + R QALE LK + G + +++ +Y+ V E++Y+ L
Sbjct: 18 ASRSRREKKSKKG--RQQALERLKRAKAGEKYKY----EVEDFTSVYEEVDEEQYSKLVQ 71
Query: 194 AAKRREQAQDFIVDDDGLGYTLSS----EDESDGENLENPKWKKDHQPKRPSVSSSSLSA 361
A Q D+IVDDDG+GY +D+ + + L++ + KD++ + A
Sbjct: 72 A----RQDDDWIVDDDGIGYVEDGREIFDDDLEDDALDSHEKGKDNKACNKD-KRTVKRA 126
Query: 362 AAAGTQRLSSMFTSSNFKKKRDDKASESIVDDVIAEFAPDEN 487
A + SMF +S +K DKA + DD++ + D N
Sbjct: 127 AVTKPNNIKSMFIAS-AGRKTVDKAVDLSKDDLLGDILQDLN 167
[27][TOP]
>UniRef100_UPI000179E492 UPI000179E492 related cluster n=1 Tax=Bos taurus
RepID=UPI000179E492
Length = 1351
Score = 54.7 bits (130), Expect = 5e-06
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 4/162 (2%)
Frame = +2
Query: 14 ASRKRRTTRGPEATARSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYNALPL 193
ASR RR + + R QALE LK + G + +++ +Y+ V E++Y+ L
Sbjct: 24 ASRSRREKKSKKG--RQQALERLKRAKAGEKYKY----EVEDFTSVYEEVDEEQYSKLVQ 77
Query: 194 AAKRREQAQDFIVDDDGLGYTLSS----EDESDGENLENPKWKKDHQPKRPSVSSSSLSA 361
A Q D+IVDDDG+GY +D+ + + L++ + KD++ + A
Sbjct: 78 A----RQDDDWIVDDDGIGYVEDGREIFDDDLEDDALDSHEKGKDNKACNKD-KRTVKRA 132
Query: 362 AAAGTQRLSSMFTSSNFKKKRDDKASESIVDDVIAEFAPDEN 487
A + SMF +S +K DKA + DD++ + D N
Sbjct: 133 AVTKPNNIKSMFIAS-AGRKTVDKAVDLSKDDLLGDILQDLN 173
[28][TOP]
>UniRef100_UPI00017F0984 PREDICTED: similar to polymerase (DNA-directed), alpha, partial n=1
Tax=Sus scrofa RepID=UPI00017F0984
Length = 1351
Score = 54.3 bits (129), Expect = 7e-06
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 4/162 (2%)
Frame = +2
Query: 14 ASRKRRTTRGPEATARSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYNALPL 193
ASR RR + + R +ALE LK + G + +++ +Y+ V ED+Y+ L
Sbjct: 18 ASRSRREKKSKKG--RQEALERLKRAKAGEKYKY----EVEDFTSVYEEVDEDQYSKLVQ 71
Query: 194 AAKRREQAQDFIVDDDGLGYTLSS----EDESDGENLENPKWKKDHQPKRPSVSSSSLSA 361
A Q D+IVDDDG+GY +D+ + + L++ + KD + + +
Sbjct: 72 A----RQDDDWIVDDDGIGYVEDGREIFDDDLEDDALDSQEKGKDDKARNKD-KRNVKKT 126
Query: 362 AAAGTQRLSSMFTSSNFKKKRDDKASESIVDDVIAEFAPDEN 487
+ SMF +S +K DKA + DD++ + D N
Sbjct: 127 VVTKPNNIKSMFIAS-AGRKTADKAIDLSKDDLLGDILQDLN 167
[29][TOP]
>UniRef100_C3ZEE6 DNA polymerase n=1 Tax=Branchiostoma floridae RepID=C3ZEE6_BRAFL
Length = 1526
Score = 54.3 bits (129), Expect = 7e-06
Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 11/180 (6%)
Frame = +2
Query: 17 SRKRRTTRGPEATARSQALELLKACRGGGRRSDLAGPQIKLENPIYDTVPEDEYNALPLA 196
+R RRT + + T R ALE LK + G + + +LEN +Y+ V EDEY+ +
Sbjct: 16 TRSRRTRK--DKTGRLAALEKLKKVKKGEK---VKYEVDELEN-VYEEVNEDEYSDVV-- 67
Query: 197 AKRREQAQDFIVDDDGLGYT-----LSSEDESDGENLENPKWKKDHQPKRPSVSSSSL-S 358
R Q D+I+DDDG GY + +D + G + + K KK P + + +
Sbjct: 68 --RTRQEDDWIIDDDGSGYVEDGREIFDDDIAGGSDAPSAKDKKKGGPGQKKAAKPMVKK 125
Query: 359 AAAAGTQRLSSMFTSSNFKKKRDDKASESIVDDVIAEFAPDENDRLRR-----RRAKPSA 523
+ SMF SS KK +++K + D+++ + + + R +R KP++
Sbjct: 126 PVIKPNNSIMSMFQSSAAKKAKNEKDVKLDEDELLGDILQEMHAESRSGGPAPKRMKPAS 185
[30][TOP]
>UniRef100_A8I1E4 Hydroxyproline-rich cell wall protein n=1 Tax=Chlamydomonas
reinhardtii RepID=A8I1E4_CHLRE
Length = 398
Score = 53.9 bits (128), Expect = 9e-06
Identities = 47/138 (34%), Positives = 56/138 (40%), Gaps = 3/138 (2%)
Frame = +3
Query: 33 PPEAPKPPPAAKPWSSLKPAVAVAADLTSPDPKSS*KTLSTTPSPKTSTTPSPSPPSAAS 212
P +P P P P S K A+ SP PK+S + S TPSPK S +PSP+P AS
Sbjct: 246 PKASPSPTPTPSPTPSPK-----ASPSPSPSPKAS-PSPSPTPSPKASPSPSPTPSPKAS 299
Query: 213 KRKISSSMMMASVTPSPLKT---NPMVKIWRIPSGRRITNLNGLLFLHHHSPPPQPARRG 383
S S TPSP + P K PS T+ SP P PA
Sbjct: 300 PSPSPSPKASPSPTPSPKASPSPTPSPKASPSPSPSPSTS-------PKVSPTPSPAGTA 352
Query: 384 CRPCSLPRISRRKGTTRP 437
+P P S K P
Sbjct: 353 PKPAPTPSPSPTKKNKPP 370