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[1][TOP]
>UniRef100_C6SXH0 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SXH0_SOYBN
Length = 145
Score = 256 bits (654), Expect = 9e-67
Identities = 123/140 (87%), Positives = 135/140 (96%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
LF+DIFRVEKLNPDDKKLF+KVTRIEARSE+FDMFMHLDINSE+YPLKVGQKFAL+LV T
Sbjct: 6 LFEDIFRVEKLNPDDKKLFDKVTRIEARSEKFDMFMHLDINSEIYPLKVGQKFALVLVST 65
Query: 268 LNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMMMKGD 447
LNPDGTPDTGYY +RQSLA+NFEYVMYGKLY+I+EGSGREKAE+NISFGGLLMM+KGD
Sbjct: 66 LNPDGTPDTGYYTQISRQSLANNFEYVMYGKLYRITEGSGREKAEMNISFGGLLMMLKGD 125
Query: 448 HSHCNKFELDQRLYLLMRKV 507
SHCNKFELDQRLYLL+RKV
Sbjct: 126 TSHCNKFELDQRLYLLIRKV 145
[2][TOP]
>UniRef100_C6T3F2 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T3F2_SOYBN
Length = 145
Score = 254 bits (649), Expect = 3e-66
Identities = 122/140 (87%), Positives = 135/140 (96%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
LF+DIFRVEKLNPDDKKLF+KVTRIEARSE+FDMFMHLDINSE+YPLKVGQKFAL+LV +
Sbjct: 6 LFEDIFRVEKLNPDDKKLFDKVTRIEARSEKFDMFMHLDINSEVYPLKVGQKFALVLVSS 65
Query: 268 LNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMMMKGD 447
LNPDGTPDTGYY +RQSLA+NFEYVMYGKLY+I+EGSGREKAE+NISFGGLLMM+KGD
Sbjct: 66 LNPDGTPDTGYYTQISRQSLANNFEYVMYGKLYRITEGSGREKAEMNISFGGLLMMLKGD 125
Query: 448 HSHCNKFELDQRLYLLMRKV 507
SHCNKFELDQRLYLL+RKV
Sbjct: 126 TSHCNKFELDQRLYLLIRKV 145
[3][TOP]
>UniRef100_B3TLS5 RNA polymerase n=1 Tax=Elaeis guineensis RepID=B3TLS5_ELAGV
Length = 145
Score = 194 bits (493), Expect = 4e-48
Identities = 96/146 (65%), Positives = 120/146 (82%), Gaps = 2/146 (1%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
MVE+LF+DIF + +++PD KK F+KV+RIEARSE+FDM+M LD+N+E+YPL VG KF ++
Sbjct: 1 MVELLFEDIFTLTRIDPDGKK-FDKVSRIEARSEQFDMYMQLDVNTEIYPLHVGDKFTMV 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSG--REKAELNISFGGLL 429
L PTL+ DGTPD+GYY+ G R+SLAD FEYVM+GKLYKISE S K E+ SFGGLL
Sbjct: 60 LAPTLSLDGTPDSGYYMQGQRKSLADKFEYVMHGKLYKISEESSGPNVKVEIYASFGGLL 119
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRKV 507
MM+KGD S+ FELDQRL+LLMRKV
Sbjct: 120 MMLKGDPSNATNFELDQRLFLLMRKV 145
[4][TOP]
>UniRef100_A9P0G9 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9P0G9_PICSI
Length = 145
Score = 194 bits (493), Expect = 4e-48
Identities = 96/146 (65%), Positives = 121/146 (82%), Gaps = 2/146 (1%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
MVE+LF+DIF V +++PD KK F+KV+RIEARSE+FDM+M LD+N ++YP+ VG+KFA+
Sbjct: 1 MVELLFEDIFTVTRIDPDGKK-FDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVA 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKIS-EGSGRE-KAELNISFGGLL 429
L PTLN DGTPD GY++ G R+SLAD +EYVMYGKLY +S EGSG K E+N SFGGLL
Sbjct: 60 LAPTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYNLSEEGSGANVKVEINASFGGLL 119
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRKV 507
M++KGD S+ FELDQRL+LLMRKV
Sbjct: 120 MLLKGDPSNAGNFELDQRLFLLMRKV 145
[5][TOP]
>UniRef100_Q9M1A8 Putative uncharacterized protein T16L24.150 n=1 Tax=Arabidopsis
thaliana RepID=Q9M1A8_ARATH
Length = 146
Score = 194 bits (492), Expect = 5e-48
Identities = 92/142 (64%), Positives = 119/142 (83%), Gaps = 1/142 (0%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
I+F+DIF V+KL+PD KK F+KVTR+EARS +MFMHLD+N+E+YPL VG KF L + P
Sbjct: 6 IMFEDIFVVDKLDPDGKK-FDKVTRVEARSHNLEMFMHLDVNTEVYPLAVGDKFTLAMAP 64
Query: 265 TLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGR-EKAELNISFGGLLMMMK 441
TLN DGTPDTGY+ PG +++LAD +EY+M+GKLYKISE G+ KAEL +SFGGLLM+++
Sbjct: 65 TLNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKISERDGKTPKAELYVSFGGLLMLLQ 124
Query: 442 GDHSHCNKFELDQRLYLLMRKV 507
GD +H + FELDQRL+LLMRK+
Sbjct: 125 GDPAHISHFELDQRLFLLMRKL 146
[6][TOP]
>UniRef100_O81097 RNA polymerase I, II and III 16.5 kDa subunit n=1 Tax=Arabidopsis
thaliana RepID=O81097_ARATH
Length = 146
Score = 192 bits (487), Expect = 2e-47
Identities = 92/142 (64%), Positives = 118/142 (83%), Gaps = 1/142 (0%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
ILF+DIF V++L+PD KK F+KVTR++A S +MFMHLD+N+E+YPL VG KF L L P
Sbjct: 6 ILFEDIFVVDQLDPDGKK-FDKVTRVQATSHNLEMFMHLDVNTEVYPLAVGDKFTLALAP 64
Query: 265 TLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGR-EKAELNISFGGLLMMMK 441
TLN DGTPDTGY+ PG +++LAD +EY+M+GKLYKISE G+ KAEL +SFGGLLM++K
Sbjct: 65 TLNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKISERDGKTPKAELYVSFGGLLMLLK 124
Query: 442 GDHSHCNKFELDQRLYLLMRKV 507
GD +H + FELDQRL+LLMRK+
Sbjct: 125 GDPAHISHFELDQRLFLLMRKL 146
[7][TOP]
>UniRef100_B9SWD9 DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide,
putative n=1 Tax=Ricinus communis RepID=B9SWD9_RICCO
Length = 146
Score = 186 bits (472), Expect = 1e-45
Identities = 92/143 (64%), Positives = 118/143 (82%), Gaps = 2/143 (1%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
+LF+DIF V+KL+PD KK F+KV+RIEA S+ DMFMHLD+N+E+YP+ VG KF + L
Sbjct: 5 VLFEDIFVVDKLDPDGKK-FDKVSRIEAHSQNCDMFMHLDVNTEIYPMAVGDKFTMALAH 63
Query: 265 TLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKIS-EGSGRE-KAELNISFGGLLMMM 438
TLN DGTPDTGYY G R++LAD +EY+M GKLYKIS EGSG+ KAE+ +S+GGLLM++
Sbjct: 64 TLNLDGTPDTGYYTQGARKTLADKYEYIMNGKLYKISEEGSGKAVKAEMLVSYGGLLMLL 123
Query: 439 KGDHSHCNKFELDQRLYLLMRKV 507
+GD SH + FELDQRL+LLMRK+
Sbjct: 124 RGDPSHVSHFELDQRLFLLMRKL 146
[8][TOP]
>UniRef100_Q5Z6G3 Putative RNA polymerase I, II and III 16.5 kDa subunit n=1
Tax=Oryza sativa Japonica Group RepID=Q5Z6G3_ORYSJ
Length = 396
Score = 181 bits (459), Expect = 4e-44
Identities = 90/147 (61%), Positives = 115/147 (78%), Gaps = 3/147 (2%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
MVE LF+DIF V +L+PD KK F++V+RIEARSE+FDM+M LD+ +E+YP++ G +F ++
Sbjct: 251 MVEHLFEDIFTVTRLDPDGKK-FDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 309
Query: 256 LVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSG---REKAELNISFGGL 426
L PTLN DGTPDTG+Y R++LAD F+YVM+GKLYKISE S K E+ SFGGL
Sbjct: 310 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 369
Query: 427 LMMMKGDHSHCNKFELDQRLYLLMRKV 507
LMM+KGD S FELDQRL+LL+RKV
Sbjct: 370 LMMLKGDPSSAASFELDQRLFLLIRKV 396
[9][TOP]
>UniRef100_A3BF08 Putative uncharacterized protein n=2 Tax=Oryza sativa
RepID=A3BF08_ORYSJ
Length = 191
Score = 181 bits (459), Expect = 4e-44
Identities = 90/147 (61%), Positives = 115/147 (78%), Gaps = 3/147 (2%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
MVE LF+DIF V +L+PD KK F++V+RIEARSE+FDM+M LD+ +E+YP++ G +F ++
Sbjct: 46 MVEHLFEDIFTVTRLDPDGKK-FDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 104
Query: 256 LVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSG---REKAELNISFGGL 426
L PTLN DGTPDTG+Y R++LAD F+YVM+GKLYKISE S K E+ SFGGL
Sbjct: 105 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 164
Query: 427 LMMMKGDHSHCNKFELDQRLYLLMRKV 507
LMM+KGD S FELDQRL+LL+RKV
Sbjct: 165 LMMLKGDPSSAASFELDQRLFLLIRKV 191
[10][TOP]
>UniRef100_C5WSX7 Putative uncharacterized protein Sb01g001330 n=1 Tax=Sorghum
bicolor RepID=C5WSX7_SORBI
Length = 145
Score = 175 bits (444), Expect = 2e-42
Identities = 87/146 (59%), Positives = 114/146 (78%), Gaps = 2/146 (1%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M E LF+D F V +L+PD KK F+KV+R+EARSE+ M+M LD+ +++YPL+ G+KF ++
Sbjct: 1 MSEHLFEDTFIVSRLDPDGKK-FDKVSRVEARSEQLGMYMQLDVATDVYPLRAGEKFNMV 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNI--SFGGLL 429
L PTLN DGTPDTGYY R++LADN+EYVM GKLYKISE + + A++ I SFGGLL
Sbjct: 60 LAPTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSQNAKVEIYASFGGLL 119
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRKV 507
M+++GD S FELDQRL+LLMRKV
Sbjct: 120 MLLRGDPSTAASFELDQRLFLLMRKV 145
[11][TOP]
>UniRef100_B9MW11 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9MW11_POPTR
Length = 148
Score = 175 bits (443), Expect = 3e-42
Identities = 85/143 (59%), Positives = 113/143 (79%), Gaps = 2/143 (1%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
I+F+DIF V+KL+PD KK F+KVTRIEA S+ DMFMHLD+N+++YP+ V KF + L
Sbjct: 7 IMFEDIFVVDKLDPDGKK-FDKVTRIEAHSQNCDMFMHLDVNTDVYPMFVNDKFTMALAH 65
Query: 265 TLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGRE--KAELNISFGGLLMMM 438
TLN DGTPDTGYY G R++LAD +EYVM+GKLY+I E R + E+ I+FGGLLM++
Sbjct: 66 TLNLDGTPDTGYYTQGGRKTLADKYEYVMHGKLYQIQEEGSRRATRTEMVITFGGLLMLL 125
Query: 439 KGDHSHCNKFELDQRLYLLMRKV 507
KGD S+ ++FELDQRL+ L+RK+
Sbjct: 126 KGDPSYVSQFELDQRLFCLIRKL 148
[12][TOP]
>UniRef100_B4FPA6 DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide
n=1 Tax=Zea mays RepID=B4FPA6_MAIZE
Length = 146
Score = 171 bits (434), Expect = 3e-41
Identities = 85/147 (57%), Positives = 112/147 (76%), Gaps = 3/147 (2%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M E LF+D F V +L+PD KK F++V+R+EARSE+ DM+M LD+ +++YP+ G+KF ++
Sbjct: 1 MSEHLFEDTFVVTRLDPDGKK-FDRVSRVEARSEQLDMYMQLDVATDVYPMHAGEKFNMV 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISE---GSGREKAELNISFGGL 426
+ PTLN DGTPDTGYY R++LADN+EYVM GKLYKISE S K E+ SFGGL
Sbjct: 60 IAPTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSSQNAKVEMYASFGGL 119
Query: 427 LMMMKGDHSHCNKFELDQRLYLLMRKV 507
LM+++GD S FELDQRL+LL+RKV
Sbjct: 120 LMLLRGDPSTAASFELDQRLFLLIRKV 146
[13][TOP]
>UniRef100_Q84SP5 Os03g0845700 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q84SP5_ORYSJ
Length = 148
Score = 171 bits (433), Expect = 4e-41
Identities = 84/149 (56%), Positives = 113/149 (75%), Gaps = 5/149 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M E LF+DIF V +L+PD KK F++V+RIEARS++FDM+M LD+ +++YP+ G +F ++
Sbjct: 1 MAEFLFEDIFTVTRLDPDGKK-FDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMV 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISE-----GSGREKAELNISFG 420
LVPTLN DGTPD+ ++ R++LAD +EYVM+GKLYKISE +K E+ SFG
Sbjct: 60 LVPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFG 119
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GLL+M+KGD S FELDQRL+LLMRKV
Sbjct: 120 GLLVMLKGDPSSAANFELDQRLFLLMRKV 148
[14][TOP]
>UniRef100_B8AN91 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8AN91_ORYSI
Length = 215
Score = 171 bits (433), Expect = 4e-41
Identities = 84/149 (56%), Positives = 113/149 (75%), Gaps = 5/149 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M E LF+DIF V +L+PD KK F++V+RIEARS++FDM+M LD+ +++YP+ G +F ++
Sbjct: 68 MAEFLFEDIFTVTRLDPDGKK-FDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMV 126
Query: 256 LVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISE-----GSGREKAELNISFG 420
LVPTLN DGTPD+ ++ R++LAD +EYVM+GKLYKISE +K E+ SFG
Sbjct: 127 LVPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFG 186
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GLL+M+KGD S FELDQRL+LLMRKV
Sbjct: 187 GLLVMLKGDPSSAANFELDQRLFLLMRKV 215
[15][TOP]
>UniRef100_A7QAN3 Chromosome chr5 scaffold_72, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QAN3_VITVI
Length = 145
Score = 171 bits (433), Expect = 4e-41
Identities = 87/146 (59%), Positives = 114/146 (78%), Gaps = 2/146 (1%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M LF DIF+V +++PD KK F+KV+RIEA+SE+ DM+M LD+N+E+YP+ G+KFA+
Sbjct: 1 MENTLFGDIFKVIQIDPDGKK-FDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMS 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKIS-EGSG-REKAELNISFGGLL 429
L TL+ DGTPDTGYY R+SLAD FEYVM+GKLYKIS EGSG K + +SFGGLL
Sbjct: 60 LASTLDLDGTPDTGYYTQAGRKSLADKFEYVMHGKLYKISEEGSGPNVKGVIYVSFGGLL 119
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRKV 507
MM+ GD ++ K +LDQR++LL+RKV
Sbjct: 120 MMLSGDPANTAKLDLDQRVFLLIRKV 145
[16][TOP]
>UniRef100_C5WSY4 Putative uncharacterized protein Sb01g001420 n=1 Tax=Sorghum
bicolor RepID=C5WSY4_SORBI
Length = 145
Score = 171 bits (432), Expect = 5e-41
Identities = 84/146 (57%), Positives = 114/146 (78%), Gaps = 2/146 (1%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M E LF+D F V +L+PD KK F++V+R+EARSE+ M+M LD+ +++YP++ +KF ++
Sbjct: 1 MSEHLFEDTFVVNRLDPDGKK-FDRVSRVEARSEQLAMYMQLDVATDVYPMQPNEKFNMV 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNI--SFGGLL 429
L PTLN DGTPDTGYY R++LADN+EYVM+GKLYKISE + + A++ I SFGGLL
Sbjct: 60 LAPTLNLDGTPDTGYYTQAGRKTLADNYEYVMHGKLYKISEDTSSQNAKVEIYASFGGLL 119
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRKV 507
M+++GD S FELDQRL+LLMRKV
Sbjct: 120 MLLRGDPSTAASFELDQRLFLLMRKV 145
[17][TOP]
>UniRef100_B6SRG8 DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide
n=1 Tax=Zea mays RepID=B6SRG8_MAIZE
Length = 146
Score = 170 bits (431), Expect = 6e-41
Identities = 84/147 (57%), Positives = 112/147 (76%), Gaps = 3/147 (2%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M + LF+D F V +L+PD KK F++V+R+EARSE+ DM+M LD+ +++YP+ G+KF ++
Sbjct: 1 MSDHLFEDTFVVTRLDPDGKK-FDRVSRVEARSEQLDMYMQLDVATDVYPMHAGEKFNMV 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISE---GSGREKAELNISFGGL 426
+ PTLN DGTPDTGYY R++LADN+EYVM GKLYKISE S K E+ SFGGL
Sbjct: 60 IAPTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSSQNAKVEMYASFGGL 119
Query: 427 LMMMKGDHSHCNKFELDQRLYLLMRKV 507
LM+++GD S FELDQRL+LL+RKV
Sbjct: 120 LMLLRGDPSTAASFELDQRLFLLIRKV 146
[18][TOP]
>UniRef100_A7QAN4 Chromosome chr5 scaffold_72, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QAN4_VITVI
Length = 145
Score = 160 bits (404), Expect = 9e-38
Identities = 82/146 (56%), Positives = 111/146 (76%), Gaps = 2/146 (1%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
MVE FDDIF V+ +P KK F+KV+RIEA SE++DMFM LD+N E YP++ G+KF ++
Sbjct: 1 MVETFFDDIFVVDGQDPGGKK-FDKVSRIEASSEQYDMFMQLDVNIEAYPIQAGEKFRMV 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKIS-EGSGRE-KAELNISFGGLL 429
L PTL+ DG T Y+ G ++SLAD F+YVMYG +YK+S EGSG + K + SFGGLL
Sbjct: 60 LAPTLHLDGADVTDYFTQGEQKSLADKFDYVMYGIIYKVSNEGSGPDVKGVIYASFGGLL 119
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRKV 507
M++KGD S+ NK E+++RL+LLM+KV
Sbjct: 120 MILKGDPSNLNKLEVNKRLFLLMKKV 145
[19][TOP]
>UniRef100_A5AWJ9 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5AWJ9_VITVI
Length = 305
Score = 156 bits (394), Expect = 1e-36
Identities = 86/167 (51%), Positives = 112/167 (67%), Gaps = 24/167 (14%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M LF DIF+V +++PD KK F+KV+RIEA+SE+ DM+M LD+N+E+YP+ G+KFA+
Sbjct: 1 MENTLFGDIFKVIQIDPDGKK-FDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMS 59
Query: 256 LVPTLNPDGTPDTGYYVP----------------------GNRQSLADNFEYVMYGKLYK 369
L TL+ DGTPDTGYY R+SLAD FEYVM+GKLYK
Sbjct: 60 LASTLDLDGTPDTGYYTQVKCCGMVVXLARTKRITAAVRVAGRKSLADKFEYVMHGKLYK 119
Query: 370 IS-EGSG-REKAELNISFGGLLMMMKGDHSHCNKFELDQRLYLLMRK 504
IS EGSG K + +SFGGLLMM+ GD ++ K +LDQR +LL+RK
Sbjct: 120 ISEEGSGPNVKGVIYVSFGGLLMMLSGDPANTAKLDLDQRXFLLIRK 166
Score = 125 bits (315), Expect = 2e-27
Identities = 70/135 (51%), Positives = 94/135 (69%), Gaps = 2/135 (1%)
Frame = +1
Query: 19 TLVRSLH*YKLQ*GDWDVTMVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMH 198
TL+ S Y L ++ VTMVE FDDIF V+ +P KK F+KV+RIEA SE++DMFM
Sbjct: 171 TLIPSCE-YLLXRDNFAVTMVETFFDDIFVVDGQDPGGKK-FDKVSRIEASSEQYDMFMQ 228
Query: 199 LDINSELYPLKVGQKFALLLVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKIS- 375
LD+N E YP++ G+KF ++L PTL+ DG T Y+ G +SLAD F+YVMYG +YK+S
Sbjct: 229 LDVNIEAYPIQAGEKFRMVLAPTLHLDGADVTDYFTQGEXKSLADKFDYVMYGIIYKVSN 288
Query: 376 EGSGRE-KAELNISF 417
EGSG + K ++I F
Sbjct: 289 EGSGPDVKGYISILF 303
[20][TOP]
>UniRef100_A9RV22 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RV22_PHYPA
Length = 147
Score = 155 bits (391), Expect = 3e-36
Identities = 80/143 (55%), Positives = 104/143 (72%), Gaps = 2/143 (1%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
+LF+DIF + +L+PD KK F+KV+RI A SE+FDM + LD+N ++YPL G+KF L L
Sbjct: 5 LLFEDIFTISQLDPDGKK-FDKVSRIVAHSEQFDMDVLLDVNIDIYPLHKGEKFTLALAS 63
Query: 265 TLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKI--SEGSGREKAELNISFGGLLMMM 438
TL+ DGT D G + NR+SLAD +EYVMYGK+YK +E G K E +SFGGLLM +
Sbjct: 64 TLSLDGTMDDGTFDQSNRKSLADKYEYVMYGKVYKYADTESKGPPKVETYVSFGGLLMCL 123
Query: 439 KGDHSHCNKFELDQRLYLLMRKV 507
KGD ++ N LDQR+YLLMRKV
Sbjct: 124 KGDPNNLNSLVLDQRVYLLMRKV 146
[21][TOP]
>UniRef100_Q9AXJ3 RNA polymerase I, II and III subunit RPB8 (Fragment) n=1
Tax=Manihot esculenta RepID=Q9AXJ3_MANES
Length = 110
Score = 154 bits (388), Expect = 6e-36
Identities = 73/110 (66%), Positives = 93/110 (84%), Gaps = 2/110 (1%)
Frame = +1
Query: 184 DMFMHLDINSELYPLKVGQKFALLLVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKL 363
DMFMHLD+N+E+YP+ VG KF + L TLN DGTPDTGYY+ G R++LAD +EY+M+GKL
Sbjct: 1 DMFMHLDVNTEIYPMAVGDKFTMALAHTLNLDGTPDTGYYIQGARKTLADKYEYIMHGKL 60
Query: 364 YKIS-EGSGRE-KAELNISFGGLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
YKIS EGSG+ KAE+ +S+GGLLMM+KGD SH + FELDQRL+LL+RK+
Sbjct: 61 YKISEEGSGKAVKAEIYVSYGGLLMMLKGDPSHVSHFELDQRLFLLIRKL 110
[22][TOP]
>UniRef100_B9MW12 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9MW12_POPTR
Length = 138
Score = 147 bits (371), Expect = 6e-34
Identities = 77/140 (55%), Positives = 101/140 (72%), Gaps = 2/140 (1%)
Frame = +1
Query: 94 DDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPTLN 273
+DIF V + K F+KVTRIEARSER ++FM LD+N+E+YP+K +++A+ L TL+
Sbjct: 2 EDIFIVGSVG----KNFDKVTRIEARSERLELFMQLDVNTEVYPIKQEERYAVKLTTTLD 57
Query: 274 PDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKI-SEGSG-REKAELNISFGGLLMMMKGD 447
PDGTPDT YY P S+ADNF Y+M+GKLYKI EGSG K E+ ISFGGLLM +KG+
Sbjct: 58 PDGTPDTAYYTPIKPGSIADNFYYIMHGKLYKILDEGSGANHKVEMLISFGGLLMSLKGN 117
Query: 448 HSHCNKFELDQRLYLLMRKV 507
F+LDQ+ +L MRK+
Sbjct: 118 PDCITDFQLDQKYFLCMRKL 137
[23][TOP]
>UniRef100_C5Z8T6 Putative uncharacterized protein Sb10g028590 n=1 Tax=Sorghum
bicolor RepID=C5Z8T6_SORBI
Length = 149
Score = 147 bits (370), Expect = 8e-34
Identities = 77/150 (51%), Positives = 107/150 (71%), Gaps = 7/150 (4%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M E LF D F+V +L+PD KK F+KVTRIEA SE +M+M LD+ +E+Y +K+G F ++
Sbjct: 1 MAEHLFKDKFKVTRLDPDGKK-FDKVTRIEATSEN-EMYMQLDVATEVYAMKLGDTFNMV 58
Query: 256 LVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISE-------GSGREKAELNIS 414
L TLN DG+ D GYY R++LAD+++Y+M+GKLYKISE G+ K E+ S
Sbjct: 59 LALTLNLDGSTDAGYYTQAGRKTLADDYDYIMHGKLYKISEDSTKDSNGNSSTKVEIYAS 118
Query: 415 FGGLLMMMKGDHSHCNKFELDQRLYLLMRK 504
FGGLLM+++GD S F+LDQRL+LL++K
Sbjct: 119 FGGLLMILRGDPSCAAGFQLDQRLFLLIKK 148
[24][TOP]
>UniRef100_B4IYV0 GH15097 n=3 Tax=Drosophila RepID=B4IYV0_DROGR
Length = 149
Score = 135 bits (340), Expect = 2e-30
Identities = 70/148 (47%), Positives = 106/148 (71%), Gaps = 4/148 (2%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M +LF+DIF V+ ++P+ KK F++V+R+ SE F M + LDINS LYP+++G KF L+
Sbjct: 1 MAGVLFEDIFNVKDMDPEGKK-FDRVSRLHCESESFKMDLILDINSWLYPMELGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQ-SLADNFEYVMYGKLYKI-SEGSGREKAELN--ISFGG 423
L TL DG PD+G Y P + + AD+FEYVMYGK+Y+I + + E + L+ +SFGG
Sbjct: 60 LATTLREDGCPDSGEYNPMEHEGTRADSFEYVMYGKIYRIEGDEAHNESSRLSAYVSFGG 119
Query: 424 LLMMMKGDHSHCNKFELDQRLYLLMRKV 507
LLM ++GD ++ + FE+DQ +YLLM+++
Sbjct: 120 LLMRLQGDANNLHGFEVDQHMYLLMKRL 147
[25][TOP]
>UniRef100_Q9VNZ3 Rpb8 n=7 Tax=Sophophora RepID=Q9VNZ3_DROME
Length = 149
Score = 135 bits (340), Expect = 2e-30
Identities = 69/148 (46%), Positives = 102/148 (68%), Gaps = 4/148 (2%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M +LF+DIF V+ ++P+ KK F++V+R+ SE F M + LDINS LYP+++G KF L+
Sbjct: 1 MAGVLFEDIFNVKDMDPEGKK-FDRVSRLHCESESFKMDLILDINSWLYPMELGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQ-SLADNFEYVMYGKLYKISEGSGREKA---ELNISFGG 423
L TL DG PD+G Y P + + AD+FEYVMYGK+Y+I +A +SFGG
Sbjct: 60 LATTLREDGCPDSGEYNPMEHEGTRADSFEYVMYGKIYRIEGDEAHNEASRLSAYVSFGG 119
Query: 424 LLMMMKGDHSHCNKFELDQRLYLLMRKV 507
LLM ++GD ++ + FE+DQ +YLLM+++
Sbjct: 120 LLMRLQGDANNLHGFEVDQHMYLLMKRL 147
[26][TOP]
>UniRef100_B3MAS1 GF25165 n=1 Tax=Drosophila ananassae RepID=B3MAS1_DROAN
Length = 149
Score = 135 bits (339), Expect = 3e-30
Identities = 69/148 (46%), Positives = 102/148 (68%), Gaps = 4/148 (2%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M +LF+DIF V+ ++P+ KK F++V+R+ SE F M + LDINS LYP+++G KF L+
Sbjct: 1 MAGVLFEDIFNVKDMDPEGKK-FDRVSRLHCESESFKMDLILDINSWLYPMELGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQ-SLADNFEYVMYGKLYKISEGSGREKA---ELNISFGG 423
L TL DG PD+G Y P + + AD+FEYVMYGK+Y+I +A +SFGG
Sbjct: 60 LATTLREDGCPDSGEYNPLEHEGTRADSFEYVMYGKIYRIEGDEAHNEASRLSAYVSFGG 119
Query: 424 LLMMMKGDHSHCNKFELDQRLYLLMRKV 507
LLM ++GD ++ + FE+DQ +YLLM+++
Sbjct: 120 LLMRLQGDANNLHGFEVDQHMYLLMKRL 147
[27][TOP]
>UniRef100_Q4S7A1 Chromosome 1 SCAF14716, whole genome shotgun sequence. (Fragment)
n=1 Tax=Tetraodon nigroviridis RepID=Q4S7A1_TETNG
Length = 150
Score = 134 bits (338), Expect = 4e-30
Identities = 72/149 (48%), Positives = 103/149 (69%), Gaps = 5/149 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M ILF+DIF V+ ++PD KK F++V+R+ SE F M + LD+N ++YP+ +G KF L+
Sbjct: 1 MAGILFEDIFDVKDIDPDGKK-FDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVP-GNRQSLADNFEYVMYGKLYKI--SEGSGREKAELN--ISFG 420
+ TL DGTPD G Y P +R S AD F+YVMYGK+YKI E S L+ +S+G
Sbjct: 60 IASTLYEDGTPDDGEYNPTDDRPSRADQFDYVMYGKVYKIEGDETSTEAATRLSAYVSYG 119
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GLLM ++GD ++ + FE+D R+YLLM+K+
Sbjct: 120 GLLMRLQGDANNLHGFEVDSRVYLLMKKL 148
[28][TOP]
>UniRef100_B4MNF8 GK17059 n=1 Tax=Drosophila willistoni RepID=B4MNF8_DROWI
Length = 149
Score = 134 bits (338), Expect = 4e-30
Identities = 69/148 (46%), Positives = 106/148 (71%), Gaps = 4/148 (2%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M ++F+DIF V+ ++P+ KK F++V+R+ SE F M + LDINS LYP+++G KF L+
Sbjct: 1 MAGVIFEDIFNVKDMDPEGKK-FDRVSRLHCESESFKMDLILDINSWLYPMELGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQ-SLADNFEYVMYGKLYKI-SEGSGREKAELN--ISFGG 423
L TL DG PD+G Y P + + AD+FEYVMYGK+Y+I + + E + L+ +SFGG
Sbjct: 60 LATTLREDGCPDSGEYNPMEHEGTRADSFEYVMYGKIYRIEGDEAHNESSRLSAYVSFGG 119
Query: 424 LLMMMKGDHSHCNKFELDQRLYLLMRKV 507
LLM ++GD ++ + FE+DQ +YLLM+++
Sbjct: 120 LLMRLQGDANNLHGFEVDQHIYLLMKRL 147
[29][TOP]
>UniRef100_UPI00016E78C9 UPI00016E78C9 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E78C9
Length = 151
Score = 134 bits (337), Expect = 5e-30
Identities = 72/149 (48%), Positives = 100/149 (67%), Gaps = 5/149 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M ILF+DIF V+ ++PD KK V+R+ SE F M + LD+N ++YP+ +G KF L+
Sbjct: 1 MAGILFEDIFDVKDIDPDGKKFDRAVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLV 60
Query: 256 LVPTLNPDGTPDTGYYVP-GNRQSLADNFEYVMYGKLYKI--SEGSGREKAELN--ISFG 420
+ TL DGTPD G Y P +R S AD F+YVMYGK+YKI E S L+ IS+G
Sbjct: 61 IASTLYEDGTPDDGEYNPTDDRPSRADQFDYVMYGKVYKIEGDETSTEAATRLSAYISYG 120
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GLLM ++GD ++ + FE+D R+YLLM+K+
Sbjct: 121 GLLMRLQGDANNLHGFEVDSRVYLLMKKL 149
[30][TOP]
>UniRef100_Q568H8 Zgc:110289 n=1 Tax=Danio rerio RepID=Q568H8_DANRE
Length = 150
Score = 133 bits (335), Expect = 9e-30
Identities = 71/149 (47%), Positives = 103/149 (69%), Gaps = 5/149 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M ILF+DIF V+ ++PD KK F++V+R+ SE F M + LD+N ++YP+ +G KF L+
Sbjct: 1 MAGILFEDIFDVKDIDPDGKK-FDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVP-GNRQSLADNFEYVMYGKLYKI--SEGSGREKAELN--ISFG 420
+ TL DGTPD G Y P +R S AD F+YVMYGK+Y+I E S L+ +S+G
Sbjct: 60 IASTLYEDGTPDDGEYNPQDDRPSRADQFDYVMYGKVYRIEGDETSTEAATRLSAYVSYG 119
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GLLM ++GD ++ + FE+D R+YLLM+K+
Sbjct: 120 GLLMRLQGDANNLHGFEVDSRVYLLMKKL 148
[31][TOP]
>UniRef100_UPI00000247CE PREDICTED: similar to RNA polymerase II subunit hRPB17 n=1 Tax=Mus
musculus RepID=UPI00000247CE
Length = 150
Score = 133 bits (334), Expect = 1e-29
Identities = 72/149 (48%), Positives = 103/149 (69%), Gaps = 5/149 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
MV ILF+DIF V+ ++P+ KK F++V+R+ SE F M + LD+N ++YP+ +G KF L+
Sbjct: 1 MVRILFEDIFDVKDIDPEGKK-FDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVP-GNRQSLADNFEYVMYGKLYKI--SEGSGREKAELN--ISFG 420
+ TL DGT D G Y P +R S AD FEYVMYGK+Y+I E S L+ +SFG
Sbjct: 60 IASTLYEDGTLDDGEYSPTDDRPSRADQFEYVMYGKVYRIEGDETSTEAATRLSAYVSFG 119
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GLLM ++GD ++ + FE+D R+YLLM+K+
Sbjct: 120 GLLMRLQGDANNLHGFEVDSRVYLLMKKL 148
[32][TOP]
>UniRef100_C3KGW8 DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1
Tax=Anoplopoma fimbria RepID=C3KGW8_9PERC
Length = 150
Score = 132 bits (332), Expect = 2e-29
Identities = 72/149 (48%), Positives = 102/149 (68%), Gaps = 5/149 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M ILF+DIF V+ ++PD KK F++V+R+ SE F M + LD+N ++YP+ +G KF L+
Sbjct: 1 MAGILFEDIFDVKDIDPDGKK-FDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVP-GNRQSLADNFEYVMYGKLYKI--SEGSGREKAELN--ISFG 420
+ TL D TPD G Y P +R S AD F+YVMYGK+YKI E S L+ +SFG
Sbjct: 60 IASTLYEDRTPDDGEYNPQDDRPSRADQFDYVMYGKVYKIEGDETSTEAATRLSAYVSFG 119
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GLLM ++GD ++ + FE+D R+YLLM+K+
Sbjct: 120 GLLMRLQGDANNLHGFEVDARVYLLMKKL 148
[33][TOP]
>UniRef100_C1BJ34 DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide
n=1 Tax=Osmerus mordax RepID=C1BJ34_OSMMO
Length = 150
Score = 132 bits (332), Expect = 2e-29
Identities = 71/149 (47%), Positives = 102/149 (68%), Gaps = 5/149 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M ILF+DI V+ ++PD KK F++V+R+ SE F M + LD+N ++YP+ +G KF L+
Sbjct: 1 MAGILFEDILDVKDIDPDGKK-FDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVP-GNRQSLADNFEYVMYGKLYKI--SEGSGREKAELN--ISFG 420
+ TL DGTPD G Y P +R S AD F+YVMYGK+YKI E S L+ +S+G
Sbjct: 60 IASTLYEDGTPDDGEYNPQDDRPSRADQFDYVMYGKVYKIEGDETSTEAATRLSAYVSYG 119
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GLLM ++GD ++ + FE+D R+YLLM+K+
Sbjct: 120 GLLMRLQGDANNLHGFEVDSRVYLLMKKL 148
[34][TOP]
>UniRef100_B9EM78 DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1
Tax=Salmo salar RepID=B9EM78_SALSA
Length = 150
Score = 132 bits (332), Expect = 2e-29
Identities = 71/149 (47%), Positives = 102/149 (68%), Gaps = 5/149 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M ILF+DIF V+ ++PD K F++V+R+ SE F M + LD+N ++YP+ +G KF L+
Sbjct: 1 MAGILFEDIFDVKDIDPDGMK-FDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVP-GNRQSLADNFEYVMYGKLYKI--SEGSGREKAELN--ISFG 420
+ TL DGTPD G Y P +R S AD F+YVMYGK+YKI E S L+ +S+G
Sbjct: 60 IASTLYEDGTPDDGEYNPQDDRPSRADQFDYVMYGKVYKIEGDETSTEAATRLSAYVSYG 119
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GLLM ++GD ++ + FE+D R+YLLM+K+
Sbjct: 120 GLLMRLQGDANNLHGFEVDSRVYLLMKKL 148
[35][TOP]
>UniRef100_UPI0001926631 PREDICTED: similar to RNA polymerase II, polypeptide H n=1
Tax=Hydra magnipapillata RepID=UPI0001926631
Length = 151
Score = 132 bits (331), Expect = 3e-29
Identities = 68/150 (45%), Positives = 104/150 (69%), Gaps = 6/150 (4%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M ++F+DIF ++ ++P KK F++V+R+ SE F M + LD+N+++YP+ +G+KF L+
Sbjct: 1 MAGVVFEDIFDIKDIDPGGKK-FDRVSRLHCESESFKMDLILDVNTQIYPVDLGEKFRLV 59
Query: 256 LVPTLNPDGTPDTG-YYVPGNRQSLADNFEYVMYGKLYKISE---GSGREKAELN--ISF 417
LV TL DGTPD G Y + N S AD FEYVMYGK+Y+I + GS L+ +S+
Sbjct: 60 LVTTLREDGTPDDGEYNMADNDPSRADQFEYVMYGKVYRIDDENVGSDHFTNRLSAYVSY 119
Query: 418 GGLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GGLLM ++GD ++ + E+DQ +YLLM+K+
Sbjct: 120 GGLLMRLQGDANNLHGMEIDQHVYLLMKKI 149
[36][TOP]
>UniRef100_C1BWD7 DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1
Tax=Esox lucius RepID=C1BWD7_ESOLU
Length = 150
Score = 130 bits (328), Expect = 6e-29
Identities = 70/149 (46%), Positives = 101/149 (67%), Gaps = 5/149 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M ILF+DIF V+ ++PD K F++V+R+ SE F M + LD+N ++YP+ +G KF L+
Sbjct: 1 MAGILFEDIFDVKDIDPDGMK-FDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVP-GNRQSLADNFEYVMYGKLYKI-SEGSGREKA---ELNISFG 420
+ TL DGTPD G Y P R S D F+YVMYGK+YKI S+ + E A +S+G
Sbjct: 60 IASTLYEDGTPDDGEYNPQDERPSRTDQFDYVMYGKVYKIESDETSTEAATRLSAYVSYG 119
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GLLM ++GD ++ + FE+D R+YLLM+K+
Sbjct: 120 GLLMRLQGDANNLHGFEVDSRVYLLMKKL 148
[37][TOP]
>UniRef100_A9PGQ8 Predicted protein n=1 Tax=Populus trichocarpa RepID=A9PGQ8_POPTR
Length = 143
Score = 130 bits (327), Expect = 7e-29
Identities = 68/139 (48%), Positives = 98/139 (70%), Gaps = 2/139 (1%)
Frame = +1
Query: 97 DIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPTLNP 276
D F +EKLNPD KK ++KV+RI ARSE+ D++M LD+++E+YP++ ++ +LL TLN
Sbjct: 6 DFFVIEKLNPDGKK-YDKVSRIVARSEKGDLYMVLDVHTEIYPIEEKSRYLVLLTETLNT 64
Query: 277 DGTPDTGYYVPGNRQSLADNFEYVMYGKLYKI-SEGSGRE-KAELNISFGGLLMMMKGDH 450
DGTP G + S D FEYV +GKLYKI EGSG + K E+ ISFGGL ++++G
Sbjct: 65 DGTPVDPRNAQGKQPSKEDKFEYVTHGKLYKIDKEGSGADFKLEIYISFGGLQLLLRGSP 124
Query: 451 SHCNKFELDQRLYLLMRKV 507
S +F+LD+ ++LMRK+
Sbjct: 125 SSLARFQLDKNYFMLMRKM 143
[38][TOP]
>UniRef100_B3RTQ3 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3RTQ3_TRIAD
Length = 147
Score = 130 bits (326), Expect = 1e-28
Identities = 68/146 (46%), Positives = 96/146 (65%), Gaps = 2/146 (1%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M +LF+DIF V+ ++PD KK F +V+R+ SE F M + LDINS+LYP++ G KF L+
Sbjct: 1 MAGVLFEDIFDVKDIDPDGKK-FHRVSRLICDSESFKMELILDINSQLYPVEDGDKFRLM 59
Query: 256 LVPTLNPDGTPDTGYYVP--GNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLL 429
L TL DG D G Y P N + ADNFEYVMYGK+Y++ K + IS+GGLL
Sbjct: 60 LASTLREDGIADDGEYNPLGVNGSNKADNFEYVMYGKIYRLEGDEDSAKIAVYISYGGLL 119
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRKV 507
M ++GD ++ F +D +YLL++K+
Sbjct: 120 MRLQGDPNNLQGFSVDNHVYLLIKKL 145
[39][TOP]
>UniRef100_UPI0000D56A8C PREDICTED: similar to Rpb8 CG11246-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D56A8C
Length = 152
Score = 129 bits (325), Expect = 1e-28
Identities = 72/153 (47%), Positives = 103/153 (67%), Gaps = 9/153 (5%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M +LF+DIF V+ ++P+ KK F++V+R+ SE F M + LDINS LYP+++G KF L+
Sbjct: 1 MAGVLFEDIFNVKDIDPEGKK-FDRVSRLHCESESFKMDLILDINSWLYPMELGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQ---SLADNFEYVMYGKLYKIS------EGSGREKAELN 408
L TL DG PD+G + P + S AD+FEYVM GK+Y+I E S R A
Sbjct: 60 LATTLREDGYPDSGDWNPQGLETEGSRADSFEYVMSGKVYRIEGDEAAVEPSSRLAA--Y 117
Query: 409 ISFGGLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
+SFGGLLM ++GD ++ + FE+DQ +YLLM+K+
Sbjct: 118 VSFGGLLMRLQGDANNLHSFEVDQHMYLLMKKI 150
[40][TOP]
>UniRef100_C1BRY6 DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1
Tax=Lepeophtheirus salmonis RepID=C1BRY6_9MAXI
Length = 150
Score = 129 bits (324), Expect = 2e-28
Identities = 72/151 (47%), Positives = 105/151 (69%), Gaps = 7/151 (4%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M +LF+DIF V+ ++P+ KK F++V+R+ SE F M + LDINS +YP+++G KF L+
Sbjct: 1 MAGVLFEDIFDVKDIDPEGKK-FDRVSRLHCESESFKMDLILDINSWIYPIELGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVP-GNRQSLADNFEYVMYGKLYKI------SEGSGREKAELNIS 414
L TL DG PD+G + P + S AD+FE+VMYGK+Y+I SE SGR A +S
Sbjct: 60 LANTLREDGFPDSGEWNPTESGPSRADSFEHVMYGKIYRIEGDEISSETSGRLAA--YVS 117
Query: 415 FGGLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
FGGLLM ++GD ++ + FE+D +YLLM+K+
Sbjct: 118 FGGLLMRLQGDANNLHGFEVDHYVYLLMKKL 148
[41][TOP]
>UniRef100_A7S8M4 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7S8M4_NEMVE
Length = 148
Score = 129 bits (324), Expect = 2e-28
Identities = 66/147 (44%), Positives = 97/147 (65%), Gaps = 3/147 (2%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M +LF+DIF V+ ++P+ KK F++V+R+ SE F M + LDINS++YP+++G KF L+
Sbjct: 1 MAGVLFEDIFDVKDIDPEGKK-FDRVSRLHCESESFKMDLILDINSQVYPVELGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAE---LNISFGGL 426
L TL DGTPD + S AD FEYVMYGK+Y+I G + A +S+GGL
Sbjct: 60 LATTLKEDGTPDDEFNPVDTTPSRADQFEYVMYGKVYRIEGDEGPDPASRLAAYVSYGGL 119
Query: 427 LMMMKGDHSHCNKFELDQRLYLLMRKV 507
LM ++GD ++ + E D +YLLM+K+
Sbjct: 120 LMRLQGDANNLHGIEADDHVYLLMKKL 146
[42][TOP]
>UniRef100_P52434 DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=4
Tax=Amniota RepID=RPAB3_HUMAN
Length = 150
Score = 129 bits (324), Expect = 2e-28
Identities = 70/149 (46%), Positives = 102/149 (68%), Gaps = 5/149 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M ILF+DIF V+ ++P+ KK F++V+R+ SE F M + LD+N ++YP+ +G KF L+
Sbjct: 1 MAGILFEDIFDVKDIDPEGKK-FDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVP-GNRQSLADNFEYVMYGKLYKI--SEGSGREKAELN--ISFG 420
+ TL DGT D G Y P +R S AD FEYVMYGK+Y+I E S L+ +S+G
Sbjct: 60 IASTLYEDGTLDDGEYNPTDDRPSRADQFEYVMYGKVYRIEGDETSTEAATRLSAYVSYG 119
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GLLM ++GD ++ + FE+D R+YLLM+K+
Sbjct: 120 GLLMRLQGDANNLHGFEVDSRVYLLMKKL 148
[43][TOP]
>UniRef100_C1BP22 DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1
Tax=Caligus rogercresseyi RepID=C1BP22_9MAXI
Length = 150
Score = 128 bits (322), Expect = 3e-28
Identities = 72/151 (47%), Positives = 104/151 (68%), Gaps = 7/151 (4%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M +LF+DIF V+ ++P+ KK F++V+R+ SE F M + LDINS +YP+ +G KF L+
Sbjct: 1 MAGVLFEDIFDVKDIDPEGKK-FDRVSRLHCESESFKMDLILDINSWIYPMDLGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVP-GNRQSLADNFEYVMYGKLYKI------SEGSGREKAELNIS 414
L TL DG PD+G + P + S AD+FE+VMYGK+Y+I SE SGR A +S
Sbjct: 60 LANTLREDGFPDSGEWNPTESGPSRADSFEHVMYGKIYRIEGDELSSETSGRLGA--YVS 117
Query: 415 FGGLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
FGGLLM ++GD ++ + FE+D +YLLM+K+
Sbjct: 118 FGGLLMRLQGDANNLHGFEVDHYIYLLMKKL 148
[44][TOP]
>UniRef100_UPI000186D263 DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide,
putative n=1 Tax=Pediculus humanus corporis
RepID=UPI000186D263
Length = 150
Score = 127 bits (319), Expect = 6e-28
Identities = 67/149 (44%), Positives = 100/149 (67%), Gaps = 5/149 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M +LF+DIF V+ ++P+ +K F++V+R+ SE F M + LD+N+ LYP+++G KF L+
Sbjct: 1 MAGVLFEDIFNVKDIDPEGRK-FDRVSRLHCESESFKMDLILDVNTWLYPMELGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVP-GNRQSLADNFEYVMYGKLYKI----SEGSGREKAELNISFG 420
L TL DG PD+G + P N S AD+FEYVMYG Y+I S + +SFG
Sbjct: 60 LATTLREDGYPDSGEWNPLDNEGSRADSFEYVMYGLNYRIEGDDSSPETSSRLAAYVSFG 119
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GLLM ++GD ++ + FE+DQ LYLL++K+
Sbjct: 120 GLLMRLQGDANNLHGFEVDQHLYLLIKKL 148
[45][TOP]
>UniRef100_UPI00004D424B polymerase (RNA) II (DNA directed) polypeptide H n=1 Tax=Xenopus
(Silurana) tropicalis RepID=UPI00004D424B
Length = 150
Score = 127 bits (319), Expect = 6e-28
Identities = 68/149 (45%), Positives = 102/149 (68%), Gaps = 5/149 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M ILF+DIF V+ ++P+ +K F++V+R+ SE F M + LD+N ++YP+ +G KF L+
Sbjct: 1 MAGILFEDIFDVKDIDPEGRK-FDRVSRLHCESESFKMDLILDVNIQVYPVDLGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVP-GNRQSLADNFEYVMYGKLYKI--SEGSGREKAELN--ISFG 420
+ TL DGT D G Y P +R S AD FEY+MYGK+Y+I E S L+ +S+G
Sbjct: 60 IASTLYEDGTLDDGEYNPTDDRPSRADQFEYIMYGKVYRIEGDETSTEAATRLSAYVSYG 119
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GLLM ++GD ++ + FE+D R+YLLM+K+
Sbjct: 120 GLLMRLQGDANNLHGFEVDSRVYLLMKKL 148
[46][TOP]
>UniRef100_C1C4T2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1
Tax=Rana catesbeiana RepID=C1C4T2_RANCA
Length = 150
Score = 127 bits (319), Expect = 6e-28
Identities = 68/149 (45%), Positives = 102/149 (68%), Gaps = 5/149 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M ILF+DIF V+ ++P+ +K F++V+R+ SE F M + LD+N ++YP+ +G KF L+
Sbjct: 1 MAGILFEDIFDVKDIDPEGRK-FDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVPG-NRQSLADNFEYVMYGKLYKI--SEGSGREKAELN--ISFG 420
+ TL DGT D G Y P +R S AD FEYVMYGK+Y+I E S L+ +S+G
Sbjct: 60 IANTLYEDGTLDGGEYNPNDDRPSRADQFEYVMYGKVYRIEGDETSTEAATRLSAYVSYG 119
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GLLM ++GD ++ + FE+D R+YL+M+K+
Sbjct: 120 GLLMRLQGDANNLHGFEVDSRIYLMMKKL 148
[47][TOP]
>UniRef100_Q17NL0 DNA-directed RNA polymerase subunit rpb8 n=1 Tax=Aedes aegypti
RepID=Q17NL0_AEDAE
Length = 150
Score = 127 bits (319), Expect = 6e-28
Identities = 70/150 (46%), Positives = 102/150 (68%), Gaps = 6/150 (4%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M ILF+DIF V+ ++P+ KK F++ +R+ SE F M + LDINS LYP+++G KF L+
Sbjct: 1 MSGILFEDIFNVKDMDPEGKK-FDRASRLHCESESFKMDLILDINSWLYPMELGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQ-SLADNFEYVMYGKLYKISEGSGREKAELN-----ISF 417
L TL+ DGTP + Y + S AD+FEYVM+GK+Y+I EG + N +SF
Sbjct: 60 LATTLHEDGTPASMEYNAAEIEGSRADSFEYVMFGKVYRI-EGDDAQLESANRLSAYVSF 118
Query: 418 GGLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GGLLM ++GD ++ + FE+DQ +YLLM+K+
Sbjct: 119 GGLLMRLQGDANNLHGFEIDQHMYLLMKKL 148
[48][TOP]
>UniRef100_UPI0000519D7F PREDICTED: similar to Rpb8 CG11246-PA isoform 1 n=1 Tax=Apis
mellifera RepID=UPI0000519D7F
Length = 151
Score = 127 bits (318), Expect = 8e-28
Identities = 69/150 (46%), Positives = 102/150 (68%), Gaps = 6/150 (4%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M +LF+DIF V+ ++P+ KK F++V+R+ SE F M + LDINS LYP+++G KF L+
Sbjct: 1 MAGVLFEDIFNVKDIDPEGKK-FDRVSRLHCESESFKMDLILDINSWLYPMELGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQ--SLADNFEYVMYGKLYKI--SEGSGREKAELN--ISF 417
L TL DG PD G + ++ S AD+FEYVM G +Y+I E S + L+ +SF
Sbjct: 60 LATTLREDGYPDGGEWNATEQEGGSRADSFEYVMSGMVYRIEGDEASNEPSSRLSAYVSF 119
Query: 418 GGLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GGLLM ++GD ++ + FE+DQ +YLLM+K+
Sbjct: 120 GGLLMRLQGDANNLHGFEIDQHMYLLMKKL 149
[49][TOP]
>UniRef100_Q6GQD4 MGC80152 protein n=1 Tax=Xenopus laevis RepID=Q6GQD4_XENLA
Length = 150
Score = 127 bits (318), Expect = 8e-28
Identities = 68/149 (45%), Positives = 102/149 (68%), Gaps = 5/149 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M ILF+DIF V+ ++P+ +K F++V+R+ SE F M + LD+N ++YP+ +G KF L+
Sbjct: 1 MAGILFEDIFDVKDIDPEGRK-FDRVSRLHCESESFKMDLILDVNIQVYPVDLGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVP-GNRQSLADNFEYVMYGKLYKI--SEGSGREKAELN--ISFG 420
+ TL DGT D G Y P +R S AD FEY+MYGK+Y+I E S L+ +S+G
Sbjct: 60 VASTLYEDGTLDDGEYNPTDDRPSRADQFEYIMYGKVYRIEGDETSTEAATRLSAYVSYG 119
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GLLM ++GD ++ + FE+D R+YLLM+K+
Sbjct: 120 GLLMRLQGDANNLHGFEVDSRVYLLMKKL 148
[50][TOP]
>UniRef100_B0WFP1 DNA-directed RNA polymeraseI n=1 Tax=Culex quinquefasciatus
RepID=B0WFP1_CULQU
Length = 150
Score = 127 bits (318), Expect = 8e-28
Identities = 70/150 (46%), Positives = 102/150 (68%), Gaps = 6/150 (4%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M ILF+DIF V+ ++P+ KK F++ +R+ SE F M + LDINS LYP+++G KF L+
Sbjct: 1 MSGILFEDIFNVKDMDPEGKK-FDRSSRLHCESESFKMDLILDINSWLYPMELGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQ-SLADNFEYVMYGKLYKISEGSGREKAELN-----ISF 417
L TL+ DGTP + Y + S AD+FEYVM+GK+Y+I EG + N +SF
Sbjct: 60 LATTLHEDGTPASMEYNAAEIEGSRADSFEYVMFGKVYRI-EGDDAQTESANRLSAYVSF 118
Query: 418 GGLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GGLLM ++GD ++ + FE+DQ +YLLM+K+
Sbjct: 119 GGLLMRLQGDANNLHGFEIDQHMYLLMKKL 148
[51][TOP]
>UniRef100_UPI00015B5C52 PREDICTED: similar to CG11246-PA n=1 Tax=Nasonia vitripennis
RepID=UPI00015B5C52
Length = 151
Score = 126 bits (317), Expect = 1e-27
Identities = 69/150 (46%), Positives = 101/150 (67%), Gaps = 6/150 (4%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M +LF+DIF V+ ++PD KK F++V R+ SE F M + LDINS LYP+++G KF L+
Sbjct: 1 MAGVLFEDIFNVKDIDPDGKK-FDRVIRLHCESESFKMDLILDINSWLYPMELGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQ--SLADNFEYVMYGKLYKI--SEGSGREKAELN--ISF 417
L TL DG PD G + + S A++FEYVM GK+Y+I E + + L+ +SF
Sbjct: 60 LATTLREDGYPDGGDWNAAEMEGGSRANSFEYVMSGKVYRIEGDEANNEPSSRLSAYVSF 119
Query: 418 GGLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GGLLM ++GD ++ + FE+DQ +YLLM+K+
Sbjct: 120 GGLLMRLQGDANNLHGFEIDQHMYLLMKKL 149
[52][TOP]
>UniRef100_Q94KV4 RNA polymerase subunit n=1 Tax=Manihot esculenta RepID=Q94KV4_MANES
Length = 96
Score = 126 bits (317), Expect = 1e-27
Identities = 62/96 (64%), Positives = 79/96 (82%), Gaps = 2/96 (2%)
Frame = +1
Query: 226 LKVGQKFALLLVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKIS-EGSGRE-KA 399
+ VG KF + L TLN DGTPDTGYY+ G R++LAD +EY+M+GKLYKIS EGSG+ KA
Sbjct: 1 MAVGDKFTMALAHTLNLDGTPDTGYYIQGARKTLADKYEYIMHGKLYKISEEGSGKAVKA 60
Query: 400 ELNISFGGLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
E+ +S+GGLLMM+KGD SH + FELDQRL+LL+RK+
Sbjct: 61 EIYVSYGGLLMMLKGDPSHVSHFELDQRLFLLIRKL 96
[53][TOP]
>UniRef100_UPI00006A46DC PREDICTED: similar to RNA polymerase II, polypeptide H n=1
Tax=Ciona intestinalis RepID=UPI00006A46DC
Length = 152
Score = 125 bits (314), Expect = 2e-27
Identities = 66/147 (44%), Positives = 99/147 (67%), Gaps = 6/147 (4%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
+LF+DIF ++ ++P+ KK F++V+R+ SE F M + LDIN++LYP+++G KF L+L
Sbjct: 5 LLFEDIFDIKDVDPEGKK-FDRVSRLHCDSESFKMELILDINTQLYPVELGDKFRLVLAT 63
Query: 265 TLNPDGTPDTGYYVP--GNRQSLADNFEYVMYGKLYKI----SEGSGREKAELNISFGGL 426
TL+ DGTP G + P + AD FEYVMYGK+Y+I S G K +SFGGL
Sbjct: 64 TLSEDGTPADGEFNPLWEKNPTRADQFEYVMYGKVYRIEGEESVGDVASKLSAYVSFGGL 123
Query: 427 LMMMKGDHSHCNKFELDQRLYLLMRKV 507
LM ++GD ++ + +DQ LYLL++K+
Sbjct: 124 LMRLQGDANNLHGMTVDQNLYLLLKKL 150
[54][TOP]
>UniRef100_Q7Q0D5 AGAP012397-PA n=1 Tax=Anopheles gambiae RepID=Q7Q0D5_ANOGA
Length = 150
Score = 125 bits (314), Expect = 2e-27
Identities = 68/149 (45%), Positives = 101/149 (67%), Gaps = 5/149 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M ILF+DIF V+ ++P+ KK F++V+R+ SE F M + LDINS LYPL++G KF L+
Sbjct: 1 MSGILFEDIFNVKDMDPEGKK-FDRVSRLHCESESFKMDLILDINSWLYPLELGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQ-SLADNFEYVMYGKLYKI----SEGSGREKAELNISFG 420
L TL+ DGT + Y + S AD+FEYVM+GK+Y+I S+ + +SFG
Sbjct: 60 LATTLHEDGTAASMEYNAAEIEGSRADSFEYVMFGKVYRIEGDDSQTESSNRLSAYVSFG 119
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GLLM ++GD ++ + FE+DQ ++LLM+K+
Sbjct: 120 GLLMRLQGDANNLHGFEIDQHMFLLMKKL 148
[55][TOP]
>UniRef100_Q010E8 Glyoxylase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q010E8_OSTTA
Length = 602
Score = 123 bits (308), Expect = 1e-26
Identities = 65/139 (46%), Positives = 92/139 (66%), Gaps = 2/139 (1%)
Frame = +1
Query: 91 FDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPTL 270
F+D+F V +PD KK F++V+R + RSE FD + +D+N ++YPL VGQ+F+L L PTL
Sbjct: 25 FEDMFEVIDRDPDGKK-FDRVSRYKCRSE-FDAELTIDVNVDVYPLSVGQRFSLALAPTL 82
Query: 271 NPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISE--GSGREKAELNISFGGLLMMMKG 444
+ DG+P+ + + SLAD +EYVMYGK YK E G +A +SFGGLLM +K
Sbjct: 83 SLDGSPEDDAFDQSGKPSLADGYEYVMYGKCYKKVEENAGGLTRASAFVSFGGLLMNLKA 142
Query: 445 DHSHCNKFELDQRLYLLMR 501
D + ++D R+YLLMR
Sbjct: 143 DPKSLQEVDVDDRIYLLMR 161
[56][TOP]
>UniRef100_A8I4L4 DNA-directed RNA polymerase II, 16.5 kDa polypeptide n=1
Tax=Chlamydomonas reinhardtii RepID=A8I4L4_CHLRE
Length = 145
Score = 123 bits (308), Expect = 1e-26
Identities = 62/142 (43%), Positives = 97/142 (68%), Gaps = 1/142 (0%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
ILF+D+F V +PD KK F+ V+R S+ ++M +H+DIN+EL+PL+ KF+L+L
Sbjct: 7 ILFEDVFDVVDKDPDGKK-FDNVSRFICHSDLYEMDLHIDINTELFPLQRNDKFSLVLAW 65
Query: 265 TLNPDGTPDTGYY-VPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMMMK 441
T+N D TP + Y PG R++L DN++YVM+GK++K + + K E+ +SFGGLLM +
Sbjct: 66 TINLDATPGSEKYDAPGGRRTLMDNYDYVMHGKVFKYKDNN--MKVEVFVSFGGLLMKLA 123
Query: 442 GDHSHCNKFELDQRLYLLMRKV 507
GD + E+D +YLL++K+
Sbjct: 124 GDPAKLEPIEVDNNVYLLLKKL 145
[57][TOP]
>UniRef100_C4WVG5 ACYPI009782 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WVG5_ACYPI
Length = 154
Score = 123 bits (308), Expect = 1e-26
Identities = 66/149 (44%), Positives = 98/149 (65%), Gaps = 8/149 (5%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
++F+DIF V+ ++P+ K+ F++V+R+ SE F M + LDINS +YP+ +G KF L+L
Sbjct: 5 MVFEDIFNVKDIDPNGKQ-FDRVSRLHCESESFKMELILDINSWIYPMDLGDKFRLVLAT 63
Query: 265 TLNPDGTPDTGYYVP---GNRQSLADNFEYVMYGKLYKIS-----EGSGREKAELNISFG 420
TL DG PD G + P AD+FEYVMYGK+Y+I + S + K +SFG
Sbjct: 64 TLREDGQPDAGDWNPIEMDQNGCRADSFEYVMYGKIYRIEGDDKVKESHKNKLAAYVSFG 123
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GLLM + GD ++ + FE+DQ +YLLM+K+
Sbjct: 124 GLLMRLLGDPNNLHGFEVDQCVYLLMKKL 152
[58][TOP]
>UniRef100_A4S3L1 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S3L1_OSTLU
Length = 136
Score = 122 bits (307), Expect = 2e-26
Identities = 67/138 (48%), Positives = 93/138 (67%), Gaps = 2/138 (1%)
Frame = +1
Query: 100 IFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPTLNPD 279
+F V +PD KK F++V+R + RSE FD + +D+N ++YPL VGQ+F+L L PTL+ D
Sbjct: 1 MFEVIDRDPDGKK-FDRVSRYKCRSE-FDAELTIDVNVDVYPLTVGQRFSLALAPTLSLD 58
Query: 280 GTPDTGYYVPGNRQSLADNFEYVMYGKLY-KISEGS-GREKAELNISFGGLLMMMKGDHS 453
GTP+ + + SLAD +EYVMYGK Y K+ E + G +A ISFGGLLM +K D
Sbjct: 59 GTPEDDAFDQSGKPSLADGYEYVMYGKCYKKVDENAGGLTRASAYISFGGLLMNLKADPK 118
Query: 454 HCNKFELDQRLYLLMRKV 507
+ + E+D R+YLLMR V
Sbjct: 119 NLQEIEIDDRIYLLMRAV 136
[59][TOP]
>UniRef100_UPI0000E47867 PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI0000E47867
Length = 151
Score = 121 bits (304), Expect = 3e-26
Identities = 65/150 (43%), Positives = 98/150 (65%), Gaps = 6/150 (4%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M +LF+DIF V+ ++P+ KK F++V+R+ SE F M + LD+N++ YP+ +G KF L+
Sbjct: 1 MAGVLFEDIFDVKDIDPEGKK-FDRVSRLHCESESFKMDLILDVNTQQYPVDLGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVP--GNRQSLADNFEYVMYGKLYKI----SEGSGREKAELNISF 417
L TL DG PD Y P + S AD+FEYVM+GK+Y+I S K +S+
Sbjct: 60 LATTLREDGFPDEPDYTPLDDGQPSRADSFEYVMFGKVYRIEGDESLTEAATKLSAYMSY 119
Query: 418 GGLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GGLLM ++GD ++ + EL+Q +YLLM+K+
Sbjct: 120 GGLLMRLQGDANNLHGVELNQHVYLLMKKL 149
[60][TOP]
>UniRef100_A8XT81 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3
n=1 Tax=Caenorhabditis briggsae RepID=RPAB3_CAEBR
Length = 148
Score = 121 bits (303), Expect = 4e-26
Identities = 66/146 (45%), Positives = 93/146 (63%), Gaps = 3/146 (2%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M I+FDD+F V+ ++PD KK F++V+R +E F M + +DINS++YPLK KF L+
Sbjct: 1 MAGIIFDDMFSVKSVDPDGKK-FDRVSRYFCDAESFKMELIIDINSQIYPLKQNDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKI-SEGSGREKAEL--NISFGGL 426
L TL DG D G Y P +EYVMYGK+Y++ + SG + +L SFGGL
Sbjct: 60 LATTLREDGLADEGEYDPKAEYPRIKQYEYVMYGKVYRLEDDDSGTDGGQLAAYASFGGL 119
Query: 427 LMMMKGDHSHCNKFELDQRLYLLMRK 504
LM +KG+ + + FE+D LYLLM+K
Sbjct: 120 LMRLKGEAINLHGFEVDMNLYLLMKK 145
[61][TOP]
>UniRef100_A8PIW4 DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide,
putative n=1 Tax=Brugia malayi RepID=A8PIW4_BRUMA
Length = 149
Score = 120 bits (301), Expect = 8e-26
Identities = 68/144 (47%), Positives = 93/144 (64%), Gaps = 3/144 (2%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
ILFDD+F V+ ++P+ KK F++V+R+ SE F M + LD+N++LYP+ + KF LLL
Sbjct: 5 ILFDDMFLVKDVDPEGKK-FDRVSRLFCDSESFKMELILDVNTQLYPMNLNDKFRLLLAT 63
Query: 265 TLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKI-SEGSGREKAEL--NISFGGLLMM 435
TL DG PD + D FEYVM+GK+Y+I E S E L SFGGLLM
Sbjct: 64 TLRDDGLPDEREFDNQTHYPRLDPFEYVMFGKVYRIEGEESSSETNTLAAYASFGGLLMR 123
Query: 436 MKGDHSHCNKFELDQRLYLLMRKV 507
+KGD ++ + FELD +YLLM+KV
Sbjct: 124 LKGDANNLHGFELDSGIYLLMKKV 147
[62][TOP]
>UniRef100_Q19826 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3
n=1 Tax=Caenorhabditis elegans RepID=RPAB3_CAEEL
Length = 148
Score = 120 bits (300), Expect = 1e-25
Identities = 64/146 (43%), Positives = 91/146 (62%), Gaps = 3/146 (2%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M I+FDD+F+V+ ++PD KK F++V+R +E F M + +DINS++YPLK K L+
Sbjct: 1 MAGIIFDDMFKVKSVDPDGKK-FDRVSRYFCDAESFKMELIIDINSQIYPLKQNDKVRLV 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISE---GSGREKAELNISFGGL 426
L TL DG D G Y P +EYVMYGK+Y++ + G+ K SFGGL
Sbjct: 60 LATTLREDGLADEGEYDPKAEYPRIKQYEYVMYGKVYRLEDDDTGTDGGKLAAYASFGGL 119
Query: 427 LMMMKGDHSHCNKFELDQRLYLLMRK 504
LM +KG+ + + FE+D LYLLM+K
Sbjct: 120 LMRLKGEAINLHGFEVDMNLYLLMKK 145
[63][TOP]
>UniRef100_C3ZLN6 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3ZLN6_BRAFL
Length = 162
Score = 119 bits (299), Expect = 1e-25
Identities = 65/162 (40%), Positives = 101/162 (62%), Gaps = 18/162 (11%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEK------------VTRIEARSERFDMFMHLDINSEL 219
M +LF+DIF V+ ++PD KK F++ ++R+ SE F M + LD+N+++
Sbjct: 1 MAGVLFEDIFDVKDIDPDGKK-FDRGEKFSFISQIVYLSRLHCESESFKMELILDVNTQV 59
Query: 220 YPLKVGQKFALLLVPTLNPDGTPDTGYYVPGN-RQSLADNFEYVMYGKLYKISEGSGRE- 393
YP+ +G KF L+L TL DG PD G Y+P + S AD FEYVMYGK+Y+I EG
Sbjct: 60 YPVDIGDKFRLVLASTLREDGAPDDGEYIPNDGTPSRADQFEYVMYGKIYRI-EGDDTHT 118
Query: 394 ----KAELNISFGGLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
+ +S+GGLLM ++GD ++ + E+D+ +YLL++K+
Sbjct: 119 ETATRLSAYVSYGGLLMRLQGDANNLHGMEVDKHVYLLIKKL 160
[64][TOP]
>UniRef100_UPI00001CCFE2 PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide H n=1 Tax=Rattus norvegicus
RepID=UPI00001CCFE2
Length = 151
Score = 119 bits (298), Expect = 2e-25
Identities = 64/146 (43%), Positives = 96/146 (65%), Gaps = 5/146 (3%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
ILF+DIF V+ ++P+ KK F++V+++ SE F + + LDIN ++YP+ +G KF L++
Sbjct: 5 ILFEDIFDVKDIDPEGKK-FDRVSQLHCESESFKVDLILDINIQIYPVDLGDKFRLVIAS 63
Query: 265 TLNPDGTPDTGYYVP-GNRQSLADNFEYVMYGKLYKISEGSGREKA----ELNISFGGLL 429
TL D T D G Y P R S AD FEYVMYGK+Y+I +A +S+GGLL
Sbjct: 64 TLYDDDTLDDGEYNPTDGRPSRADQFEYVMYGKVYRIEGDESSTEAATCLSACVSYGGLL 123
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRKV 507
M +GD ++ ++FE+D R+YLL +K+
Sbjct: 124 MRPQGDANNLHEFEVDSRVYLLKKKL 149
[65][TOP]
>UniRef100_C7BVR9 Putative Rna polymerase ii (B) subunit protein 8 n=1
Tax=Angiostrongylus cantonensis RepID=C7BVR9_9BILA
Length = 148
Score = 117 bits (292), Expect = 8e-25
Identities = 58/147 (39%), Positives = 93/147 (63%), Gaps = 3/147 (2%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M +++FDD+F V+ ++PD KK F++ +R+ SE F M + LD+N+++YP+ + KF L+
Sbjct: 1 MSDVIFDDMFTVKNIDPDGKK-FDRCSRLFCDSESFSMELILDVNTQIYPVNLNDKFRLM 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKI---SEGSGREKAELNISFGGL 426
+ ++ DG PD G + P S FEYVM+G++Y+I GS + SFGGL
Sbjct: 60 ITTSVRDDGMPDEGEHDPQANYSRVAQFEYVMFGRVYRIEGDDSGSDGTRIAAYASFGGL 119
Query: 427 LMMMKGDHSHCNKFELDQRLYLLMRKV 507
LM +KG+ + + F LD +YLL++KV
Sbjct: 120 LMRLKGEAFNLHGFGLDSNIYLLIKKV 146
[66][TOP]
>UniRef100_Q54YW8 DNA-directed RNA polymerases I, II, and III subunit rpabc3 n=1
Tax=Dictyostelium discoideum RepID=RPAB3_DICDI
Length = 142
Score = 117 bits (292), Expect = 8e-25
Identities = 58/143 (40%), Positives = 94/143 (65%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M ILF+D F V++++PD KK F++V+R SE ++M + +DI + +YPL ++F ++
Sbjct: 1 MTSILFEDTFEVKEIDPDGKK-FDRVSRFVCYSENYEMDLQIDIATHIYPLG-HERFKMV 58
Query: 256 LVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMM 435
L +LN DG+ D N+ SLAD ++YVMYGK++K + + K + SFGGLL++
Sbjct: 59 LASSLNLDGSSDNSGSYDTNKPSLADKYDYVMYGKIFKYQKENSSSKVSVFASFGGLLVL 118
Query: 436 MKGDHSHCNKFELDQRLYLLMRK 504
++GD + ELD R+YLL++K
Sbjct: 119 LQGDPRYLPGIELDARIYLLIKK 141
[67][TOP]
>UniRef100_C1DYQ6 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1DYQ6_9CHLO
Length = 151
Score = 116 bits (290), Expect = 1e-24
Identities = 60/143 (41%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
I ++DIF V +PD KK F+KV+R RS+ F+ + +DIN ++Y L VG +F L+L P
Sbjct: 10 IAYEDIFEVIDRDPDGKK-FDKVSRFRCRSQ-FEADLEIDINVDIYKLDVGTRFTLVLSP 67
Query: 265 TLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISE--GSGREKAELNISFGGLLMMM 438
TL+ DGTP+ Y +++LA +++YVMYGK++K + G +K + SFGGLLM +
Sbjct: 68 TLSLDGTPEDPSYDQTGKETLASSYDYVMYGKVFKKEDENAGGIQKTTVIASFGGLLMRI 127
Query: 439 KGDHSHCNKFELDQRLYLLMRKV 507
K D + + ++D R+Y+L+RK+
Sbjct: 128 KADPKNLQEVDIDNRVYVLIRKI 150
[68][TOP]
>UniRef100_B7G7Y8 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B7G7Y8_PHATR
Length = 149
Score = 115 bits (288), Expect = 2e-24
Identities = 67/142 (47%), Positives = 90/142 (63%), Gaps = 3/142 (2%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
LF+DIF + LNPD K FE+V RI+A F+ + LDIN E+Y L+ KF L+L T
Sbjct: 9 LFEDIFEITALNPDGYK-FERVNRIQATGTTFECELLLDINCEIYTLRETDKFTLVLAST 67
Query: 268 LNPDGTP-DTGYYVPGN--RQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMMM 438
L+ DG+P D YVP N SLADN+EYVM+G+++ +S + IS+GGLLM +
Sbjct: 68 LHLDGSPADHFSYVPANSAEPSLADNYEYVMHGRVFDMSYQKD-GTVVIAISYGGLLMRL 126
Query: 439 KGDHSHCNKFELDQRLYLLMRK 504
GD H + DQRLYLL++K
Sbjct: 127 TGDQRHLSSILPDQRLYLLLKK 148
[69][TOP]
>UniRef100_UPI0000519D7D PREDICTED: similar to Rpb8 CG11246-PA isoform 2 n=1 Tax=Apis
mellifera RepID=UPI0000519D7D
Length = 139
Score = 107 bits (266), Expect = 9e-22
Identities = 60/133 (45%), Positives = 86/133 (64%), Gaps = 6/133 (4%)
Frame = +1
Query: 127 DDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPTLNPDGTPDTGYYV 306
DD + V+R+ SE F M + LDINS LYP+++G KF L+L TL DG PD G +
Sbjct: 5 DDWVVVTTVSRLHCESESFKMDLILDINSWLYPMELGDKFRLVLATTLREDGYPDGGEWN 64
Query: 307 PGNRQ--SLADNFEYVMYGKLYKI--SEGSGREKAELN--ISFGGLLMMMKGDHSHCNKF 468
++ S AD+FEYVM G +Y+I E S + L+ +SFGGLLM ++GD ++ + F
Sbjct: 65 ATEQEGGSRADSFEYVMSGMVYRIEGDEASNEPSSRLSAYVSFGGLLMRLQGDANNLHGF 124
Query: 469 ELDQRLYLLMRKV 507
E+DQ +YLLM+K+
Sbjct: 125 EIDQHMYLLMKKL 137
[70][TOP]
>UniRef100_B8CGC8 RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8CGC8_THAPS
Length = 153
Score = 104 bits (259), Expect = 6e-21
Identities = 61/144 (42%), Positives = 85/144 (59%), Gaps = 5/144 (3%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
LF+DIF + LNP+ KK F+ V R+ A F+ + LD N ++Y L G+K L+L T
Sbjct: 11 LFEDIFEITHLNPEGKK-FDLVNRLSATGTTFECDLLLDYNCQIYSLLEGEKMTLVLAST 69
Query: 268 LNPDGTPD--TGYYVP---GNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLM 432
LN DGTPD T Y N +LADN+EYVM+G+++ +S + ISFGGLL
Sbjct: 70 LNLDGTPDDHTSYNPATSHNNELTLADNYEYVMHGRVFDVSYKKD-GVVVIAISFGGLLC 128
Query: 433 MMKGDHSHCNKFELDQRLYLLMRK 504
+ GD H + D RLY+L++K
Sbjct: 129 RLTGDQRHLSSVLPDMRLYVLIKK 152
[71][TOP]
>UniRef100_UPI0000519D7E PREDICTED: similar to Rpb8 CG11246-PA n=1 Tax=Apis mellifera
RepID=UPI0000519D7E
Length = 139
Score = 103 bits (258), Expect = 7e-21
Identities = 57/125 (45%), Positives = 83/125 (66%), Gaps = 6/125 (4%)
Frame = +1
Query: 151 VTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPTLNPDGTPDTGYYVPGNRQ--S 324
++R+ SE F M + LDINS LYP+++G KF L+L TL DG PD G + ++ S
Sbjct: 13 LSRLHCESESFKMDLILDINSWLYPMELGDKFRLVLATTLREDGYPDGGEWNATEQEGGS 72
Query: 325 LADNFEYVMYGKLYKI--SEGSGREKAELN--ISFGGLLMMMKGDHSHCNKFELDQRLYL 492
AD+FEYVM G +Y+I E S + L+ +SFGGLLM ++GD ++ + FE+DQ +YL
Sbjct: 73 RADSFEYVMSGMVYRIEGDEASNEPSSRLSAYVSFGGLLMRLQGDANNLHGFEIDQHMYL 132
Query: 493 LMRKV 507
LM+K+
Sbjct: 133 LMKKL 137
[72][TOP]
>UniRef100_A8N1X0 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8N1X0_COPC7
Length = 153
Score = 102 bits (254), Expect = 2e-20
Identities = 58/148 (39%), Positives = 84/148 (56%), Gaps = 8/148 (5%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
ILFDDIF + ++ + KK F++V+R+ A S+ +DM + LD N EL+PLK GQ FAL L
Sbjct: 8 ILFDDIFTISDIDKEGKK-FDRVSRLYAHSKNYDMDLTLDYNVELFPLKEGQSFALALAS 66
Query: 265 TLNPDGTPDTG--------YYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFG 420
+L G + R+ L D++EYVMYGK+YK +G+ E SFG
Sbjct: 67 SLTKGGAKGDDEEDKEHDVWRPDSKRRGLDDDYEYVMYGKVYKF-DGASSEIVTAYASFG 125
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMRK 504
GLLM + G H L +++L+R+
Sbjct: 126 GLLMSLTGSFRHMTSIVLGDPVFILLRR 153
[73][TOP]
>UniRef100_A8Q8G6 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS
7966 RepID=A8Q8G6_MALGO
Length = 147
Score = 100 bits (250), Expect = 6e-20
Identities = 61/144 (42%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
LFD F V+ ++PD KK F++V+R+ A S DM + LDI +++YP+ VGQ+ A LLV +
Sbjct: 6 LFDTQFVVKDIDPDGKK-FDRVSRVIASSPTLDMTLSLDIATDIYPVHVGQQLAFLLVSS 64
Query: 268 L-----NPDGTPD-TGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLL 429
L D T D + + + SLA F+YVMYGK++K E S E+ + SFGGLL
Sbjct: 65 LRRDKAESDATADRDAWRLDQDDNSLAKGFDYVMYGKIFKYDERS-TEQVTVYGSFGGLL 123
Query: 430 MMMKGDHSHCNKFELDQRLYLLMR 501
M + G H +K + +YLLMR
Sbjct: 124 MALTGSFRHLSKITVGSNVYLLMR 147
[74][TOP]
>UniRef100_C9J413 Putative uncharacterized protein POLR2H n=1 Tax=Homo sapiens
RepID=C9J413_HUMAN
Length = 122
Score = 99.0 bits (245), Expect = 2e-19
Identities = 54/144 (37%), Positives = 84/144 (58%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M ILF+DIF V+ ++P+ KK F++V+R+ SE F M + LD+N ++YP+ +G KF L+
Sbjct: 1 MAGILFEDIFDVKDIDPEGKK-FDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMM 435
+ TL DGT D G Y P + R + +S+GGLLM
Sbjct: 60 IASTLYEDGTLDDGEYNPTD-----------------------DRPSSSAYVSYGGLLMR 96
Query: 436 MKGDHSHCNKFELDQRLYLLMRKV 507
++GD ++ + FE+D R+YLLM+K+
Sbjct: 97 LQGDANNLHGFEVDSRVYLLMKKL 120
[75][TOP]
>UniRef100_C9JCU7 Putative uncharacterized protein POLR2H n=1 Tax=Homo sapiens
RepID=C9JCU7_HUMAN
Length = 175
Score = 98.6 bits (244), Expect = 3e-19
Identities = 60/157 (38%), Positives = 89/157 (56%), Gaps = 1/157 (0%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M ILF+DIF V+ ++P+ KK F++V+R+ SE F M + LD+N ++YP+ +G KF L+
Sbjct: 1 MAGILFEDIFDVKDIDPEGKK-FDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVP-GNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLM 432
+ TL DGT D G Y P +R S AD FEYVMYGK+Y+I E E + L+
Sbjct: 60 IASTLYEDGTLDDGEYNPTDDRPSRADQFEYVMYGKVYRI------EGDETSTEAATRLL 113
Query: 433 MMKGDHSHCNKFELDQRLYLLMRKV*KSC*EQG*GGC 543
++ C++ L+ L +V + GGC
Sbjct: 114 RLRAAEWQCSRITGWGLLFQLCVRVLWGPAHEAAGGC 150
[76][TOP]
>UniRef100_C9JBJ6 Putative uncharacterized protein POLR2H n=2 Tax=Amniota
RepID=C9JBJ6_HUMAN
Length = 114
Score = 98.2 bits (243), Expect = 4e-19
Identities = 53/112 (47%), Positives = 76/112 (67%), Gaps = 5/112 (4%)
Frame = +1
Query: 187 MFMHLDINSELYPLKVGQKFALLLVPTLNPDGTPDTGYYVP-GNRQSLADNFEYVMYGKL 363
M + LD+N ++YP+ +G KF L++ TL DGT D G Y P +R S AD FEYVMYGK+
Sbjct: 1 MDLILDVNIQIYPVDLGDKFRLVIASTLYEDGTLDDGEYNPTDDRPSRADQFEYVMYGKV 60
Query: 364 YKI--SEGSGREKAELN--ISFGGLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
Y+I E S L+ +S+GGLLM ++GD ++ + FE+D R+YLLM+K+
Sbjct: 61 YRIEGDETSTEAATRLSAYVSYGGLLMRLQGDANNLHGFEVDSRVYLLMKKL 112
[77][TOP]
>UniRef100_B0CQL5 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0CQL5_LACBS
Length = 162
Score = 97.8 bits (242), Expect = 5e-19
Identities = 60/157 (38%), Positives = 85/157 (54%), Gaps = 17/157 (10%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
I+FDDIF + ++ + KK F++V+R+ A S+ +DM + LD N EL+PL+ Q FAL L
Sbjct: 8 IVFDDIFTISDIDKEGKK-FDRVSRLYAHSKNYDMDLTLDYNVELFPLEKDQSFALALAS 66
Query: 265 TLNPDGTP---------------DTGYYVPG--NRQSLADNFEYVMYGKLYKISEGSGRE 393
+L G P + + P R+ L D++EYVMYGK+YK +G E
Sbjct: 67 SLARGGAPGSSGTDGAQEEADDKERDVWRPDGKGRRGLEDDYEYVMYGKVYKF-DGGTSE 125
Query: 394 KAELNISFGGLLMMMKGDHSHCNKFELDQRLYLLMRK 504
SFGGLLM + G H L +YLLMR+
Sbjct: 126 IVTAYASFGGLLMSLTGSFRHMTSIVLGDPVYLLMRR 162
[78][TOP]
>UniRef100_Q75C08 ACR111Cp n=1 Tax=Eremothecium gossypii RepID=Q75C08_ASHGO
Length = 144
Score = 96.3 bits (238), Expect = 2e-18
Identities = 62/149 (41%), Positives = 94/149 (63%), Gaps = 6/149 (4%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMF-MHLDINSELYPLKVGQKFAL 252
M LFDDIF ++++ D+ + KV+RIEA S D + LD+N+EL+PL+ Q+ +
Sbjct: 1 MSSTLFDDIFTIQEV---DQGRYNKVSRIEAISTSQDTCKLTLDVNTELFPLQPQQQLTV 57
Query: 253 LLVPTLNPDGTPDT-GYY---VPGNRQSLADNFEYVMYGKLYKISEGSG-REKAELNISF 417
+L TLN DGT D+ G + PG R SLAD+F+YV YG YK E +G ++ + SF
Sbjct: 58 MLATTLNLDGTEDSHGSWRPPAPGAR-SLADDFDYVTYGTAYKFEEANGNKDMLAVYYSF 116
Query: 418 GGLLMMMKGDHSHCNKFELDQRLYLLMRK 504
GGLLM ++G++ + F+ + +YLL R+
Sbjct: 117 GGLLMRLEGNYRLLSNFK-QENVYLLCRR 144
[79][TOP]
>UniRef100_UPI00018644E9 hypothetical protein BRAFLDRAFT_86283 n=1 Tax=Branchiostoma
floridae RepID=UPI00018644E9
Length = 126
Score = 95.1 bits (235), Expect = 3e-18
Identities = 49/112 (43%), Positives = 71/112 (63%), Gaps = 13/112 (11%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEK------------VTRIEARSERFDMFMHLDINSEL 219
M +LF+DIF V+ ++PD KK F++ ++R+ SE F M + LD+N+++
Sbjct: 1 MAGVLFEDIFDVKDIDPDGKK-FDRGEKFSFISQIVYLSRLHCESESFKMELILDVNTQV 59
Query: 220 YPLKVGQKFALLLVPTLNPDGTPDTGYYVPGN-RQSLADNFEYVMYGKLYKI 372
YP+ +G KF L+L TL DG PD G Y+P + S AD FEYVMYGK+Y+I
Sbjct: 60 YPVDIGDKFRLVLASTLREDGAPDDGEYIPNDGTPSRADQFEYVMYGKIYRI 111
[80][TOP]
>UniRef100_B6HIG3 Pc21g06060 protein n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6HIG3_PENCW
Length = 143
Score = 94.0 bits (232), Expect = 8e-18
Identities = 50/143 (34%), Positives = 84/143 (58%), Gaps = 3/143 (2%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
+LF+D F + +N +++V+R+ S + LD+N+ELYP VG+ +L L
Sbjct: 5 LLFEDTFTITSVNAQK---YDRVSRLTCNSNDASLTFTLDVNTELYPCAVGESLSLALAS 61
Query: 265 TLNPDGTPDTGYY---VPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMM 435
TL+ DG DT V QSLAD+++YV +GK+Y+ EG+ ++ + +SFGGLL+
Sbjct: 62 TLSLDGKEDTRASWREVSMGEQSLADDYDYVCHGKVYRFEEGATKDTMAVFVSFGGLLLY 121
Query: 436 MKGDHSHCNKFELDQRLYLLMRK 504
++G + +D +YLL++K
Sbjct: 122 LEGPYKKLAPLRID-HVYLLLKK 143
[81][TOP]
>UniRef100_Q0D9U8 Os06g0697400 protein n=2 Tax=Oryza sativa Japonica Group
RepID=Q0D9U8_ORYSJ
Length = 82
Score = 93.6 bits (231), Expect = 1e-17
Identities = 40/71 (56%), Positives = 55/71 (77%)
Frame = +1
Query: 187 MFMHLDINSELYPLKVGQKFALLLVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLY 366
M+M LD+ +E+YP++ G +F ++L PTLN DGTPDTG+Y R++LAD F+YVM+GKLY
Sbjct: 1 MYMQLDVATEVYPMRAGDRFTMVLAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLY 60
Query: 367 KISEGSGREKA 399
KISE S +A
Sbjct: 61 KISEDSSSGQA 71
[82][TOP]
>UniRef100_B2B2T5 Predicted CDS Pa_6_2130 (Fragment) n=1 Tax=Podospora anserina
RepID=B2B2T5_PODAN
Length = 209
Score = 93.2 bits (230), Expect = 1e-17
Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
LF+D FRV KL+ DKK +++V RI A SE + + LDIN+EL+P K G + +L+ +
Sbjct: 68 LFEDNFRVHKLS--DKK-YDRVDRIYATSEDKSIEITLDINNELFPCKEGDELNMLIATS 124
Query: 268 LNPDGTPDT--GYY----VPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLL 429
L+ DGT D G+ + + SLAD ++YV YGK+YK +G + + ISFGGLL
Sbjct: 125 LHYDGTKDDERGWRDVAKMGASEGSLADQYDYVCYGKIYKFEDGEDGQTIKAYISFGGLL 184
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRK 504
M + G + ++ +YLL+R+
Sbjct: 185 MSLVGPYKKLTPLRVEY-VYLLVRR 208
[83][TOP]
>UniRef100_Q6C2A8 YALI0F09383p n=1 Tax=Yarrowia lipolytica RepID=Q6C2A8_YARLI
Length = 139
Score = 92.0 bits (227), Expect = 3e-17
Identities = 53/140 (37%), Positives = 85/140 (60%), Gaps = 2/140 (1%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARS-ERFDMFMHLDINSELYPLKVGQKFALLLVP 264
LF+D F+ + D +++V+RI A+S D+ + LD+N+EL+P+ G + L
Sbjct: 4 LFEDSFKTTSV---DSARYDRVSRITAQSLNHDDIHLTLDVNTELFPMSKGDVVTVALAS 60
Query: 265 TLNPDGTPDTGYYVPG-NRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMMMK 441
L T +G+ P +SLAD+++YVMYG +YK EGSG EK + +SFGGLL+ ++
Sbjct: 61 QLTDKETTYSGWREPKVGEKSLADDYDYVMYGTVYKFEEGSG-EKVAVYVSFGGLLLCLE 119
Query: 442 GDHSHCNKFELDQRLYLLMR 501
G + H + + + +YLLMR
Sbjct: 120 GGYRHLSSLK-QENVYLLMR 138
[84][TOP]
>UniRef100_UPI0000E80BBA PREDICTED: similar to RNA polymerase II subunit hRPB17 isoform 1
n=1 Tax=Gallus gallus RepID=UPI0000E80BBA
Length = 122
Score = 90.9 bits (224), Expect = 7e-17
Identities = 60/149 (40%), Positives = 82/149 (55%), Gaps = 5/149 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M ILF+DIF V+ ++P+ KK FD G KF L+
Sbjct: 1 MAGILFEDIFDVKDIDPEGKK--------------FDR---------------GDKFRLV 31
Query: 256 LVPTLNPDGTPDTGYYVP-GNRQSLADNFEYVMYGKLYKIS--EGSGREKAELN--ISFG 420
+ TL DGT D G Y P +R S AD FEYVMYGK+Y+I E S L+ +S+G
Sbjct: 32 IASTLYEDGTLDDGEYNPTDDRPSRADQFEYVMYGKVYRIEGDETSTEAATRLSAYVSYG 91
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
GLLM ++GD ++ + FE+D R+YLLM+K+
Sbjct: 92 GLLMRLQGDANNLHGFEVDSRVYLLMKKL 120
[85][TOP]
>UniRef100_C4Y3Q1 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4Y3Q1_CLAL4
Length = 148
Score = 90.9 bits (224), Expect = 7e-17
Identities = 57/147 (38%), Positives = 87/147 (59%), Gaps = 5/147 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERF-DMFMHLDINSELYPLKVGQKFAL 252
M ILF+D+F VE + D + KV+RIEA+S D+ + LDIN EL+P+K +
Sbjct: 1 MSGILFEDMFNVESI---DNARYNKVSRIEAQSSTSQDIKITLDINRELFPVKDNDSLTI 57
Query: 253 LLVPTLNPDGTPDT--GYYVPGNR--QSLADNFEYVMYGKLYKISEGSGREKAELNISFG 420
L +L + + T G + P R +SLAD+++YVMYG +YK E S +K + ISFG
Sbjct: 58 ALASSLGNESSMLTSNGSWRPPKRGDRSLADDYDYVMYGTVYKFEESSDNDKMAVYISFG 117
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMR 501
GLLM ++G + + + + Y+L+R
Sbjct: 118 GLLMRLEGGYRSLSSLK-QENAYILIR 143
[86][TOP]
>UniRef100_Q6CRR0 KLLA0D07139p n=1 Tax=Kluyveromyces lactis RepID=Q6CRR0_KLULA
Length = 145
Score = 90.1 bits (222), Expect = 1e-16
Identities = 57/149 (38%), Positives = 89/149 (59%), Gaps = 6/149 (4%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMF-MHLDINSELYPLKVGQKFAL 252
M LFDD+F V+++ D + KV+RIEA+S + + LDINSEL+P+K + A+
Sbjct: 1 MSSALFDDVFTVQEV---DTGRYNKVSRIEAQSTSQESCKLTLDINSELFPIKTQDQLAV 57
Query: 253 LLVPTLNPDGTPD---TGYYVP-GNRQSLADNFEYVMYGKLYKISEGSG-REKAELNISF 417
++ +L DG+ + T + P +SLAD+++YVMYG YK E G ++ + SF
Sbjct: 58 MITTSLQLDGSEEPQGTSWRAPPAGTRSLADDYDYVMYGTAYKFEEVKGNKDLLAVYYSF 117
Query: 418 GGLLMMMKGDHSHCNKFELDQRLYLLMRK 504
GGLLM ++G++ N + + YLL RK
Sbjct: 118 GGLLMRLEGNYRLLNNLK-QENAYLLCRK 145
[87][TOP]
>UniRef100_C5GJE8 UDP-glucose 4-epimerase Gal10 n=2 Tax=Ajellomyces dermatitidis
RepID=C5GJE8_AJEDR
Length = 146
Score = 89.7 bits (221), Expect = 1e-16
Identities = 50/146 (34%), Positives = 81/146 (55%), Gaps = 6/146 (4%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
+LF+D F + +N +++V RI S LD+N+ELYP+ G+ +L L
Sbjct: 5 VLFEDTFTITSINAQK---YDRVARISCTSSDNLTTFTLDVNTELYPVSTGESLSLALAS 61
Query: 265 TLNPDGTPDTG------YYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGL 426
TL DG D+ V Q+LA++++YV +GK+Y+ EG+ E + +SFGGL
Sbjct: 62 TLALDGKDDSAGGKGAWRDVGMGEQTLANDYDYVCHGKVYRFEEGNTAENMSVFVSFGGL 121
Query: 427 LMMMKGDHSHCNKFELDQRLYLLMRK 504
L+ ++G + N +D +YLLM+K
Sbjct: 122 LLYLEGPYKKLNPLRIDY-IYLLMKK 146
[88][TOP]
>UniRef100_A0DFX5 Chromosome undetermined scaffold_5, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0DFX5_PARTE
Length = 148
Score = 89.0 bits (219), Expect = 2e-16
Identities = 48/142 (33%), Positives = 85/142 (59%), Gaps = 3/142 (2%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
L D+ F+VE ++ + F++V+RI+ +S+ ++ M LD+N ++YP+ G ++ +L+V +
Sbjct: 8 LIDEYFKVEDIDQAGQS-FKRVSRIKCKSKSGEVDMELDVNIDIYPIDKGSEYRVLIVRS 66
Query: 268 LNPDGTPDTGYYVPGNRQ---SLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMMM 438
L D G Y P Q L + F+Y M+G+++K+ + + + SFGGL++ +
Sbjct: 67 LGISQEMDQGKYKPEFSQIDNELLEKFQYAMFGRVFKMIKDQNK-MINVFASFGGLILKL 125
Query: 439 KGDHSHCNKFELDQRLYLLMRK 504
G +KF DQR+YLLMRK
Sbjct: 126 SGKSEELDKFADDQRVYLLMRK 147
[89][TOP]
>UniRef100_A7ET20 UDP-glucose 4-epimerase Gal10 n=1 Tax=Sclerotinia sclerotiorum 1980
UF-70 RepID=A7ET20_SCLS1
Length = 151
Score = 89.0 bits (219), Expect = 2e-16
Identities = 58/147 (39%), Positives = 82/147 (55%), Gaps = 8/147 (5%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSE-RFDMFMHLDINSELYPLKVGQKFALLLVP 264
LFD+ F V +L D K + +V RI+A S + M LDIN+ELYPL VG ++L
Sbjct: 9 LFDEHFTVNEL---DHKKYVRVGRIKATSTVDHSVSMLLDINTELYPLAVGDNIRVVLAT 65
Query: 265 TLNPDGTPDTGY-------YVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGG 423
+LN DGT D G G +LAD F+YV +GK+YK + + + ISFGG
Sbjct: 66 SLNLDGTKDDGKGWRDANRMGLGGEATLADMFDYVCHGKIYKFEDQENSDLIKAYISFGG 125
Query: 424 LLMMMKGDHSHCNKFELDQRLYLLMRK 504
LLM ++G + +D +YLL++K
Sbjct: 126 LLMGLEGPYKKLTPLRVDY-VYLLIKK 151
[90][TOP]
>UniRef100_A2Q7W7 Catalytic activity: nucleoside triphosphate + RNA(n) =
Pyrophosphate + RNA(n+1) n=1 Tax=Aspergillus niger CBS
513.88 RepID=A2Q7W7_ASPNC
Length = 144
Score = 89.0 bits (219), Expect = 2e-16
Identities = 50/144 (34%), Positives = 83/144 (57%), Gaps = 4/144 (2%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
+LF+D F + +N + +++V+R+ S LD+NSELYP VG+ + L
Sbjct: 5 VLFEDTFTITTIN---SQKYDRVSRLSCNSTDTLSHFTLDVNSELYPCVVGESVNMALAS 61
Query: 265 TLNPDGTPDTGYY----VPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLM 432
TL+ DG D+G V Q+LA++++YV +GK+Y+ EGS + + ISFGGLL+
Sbjct: 62 TLSLDGKDDSGSKGWREVGMGEQTLANDYDYVCHGKVYRFEEGSSQGNMAVFISFGGLLL 121
Query: 433 MMKGDHSHCNKFELDQRLYLLMRK 504
++G + +D +YLL++K
Sbjct: 122 YLEGPYKKLAPLRIDY-VYLLLKK 144
[91][TOP]
>UniRef100_C4PYX1 DNA-directed rna polymerase subunit rpb8, putative n=1
Tax=Schistosoma mansoni RepID=C4PYX1_SCHMA
Length = 156
Score = 88.6 bits (218), Expect = 3e-16
Identities = 59/152 (38%), Positives = 92/152 (60%), Gaps = 12/152 (7%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
L +DIF V+ ++ D KK F+KV+R+ SE F M + LDI++ +Y L G KF ++L T
Sbjct: 4 LLEDIFDVKDVDKDGKK-FDKVSRLFCESESFKMGLILDIHALIYGLSKGDKFRMVLTKT 62
Query: 268 -LNPDGT----PDTGYYVPGNRQSLADN----FEYVMYGKLYKI-SEGSGREKAELN--I 411
LN GT D + LA++ F+YV YGK+Y+I ++ SG + + L+ +
Sbjct: 63 LLNELGTDADDDDEDDAADETDEKLANSKMAEFDYVCYGKIYRIETQDSGVDASRLSCYV 122
Query: 412 SFGGLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
SFGGLLM + GD S+ F + + LYL+++K+
Sbjct: 123 SFGGLLMQLTGDASNLQGFRVGKHLYLMIKKL 154
[92][TOP]
>UniRef100_C5DEX5 KLTH0D10538p n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DEX5_LACTC
Length = 144
Score = 88.6 bits (218), Expect = 3e-16
Identities = 57/149 (38%), Positives = 90/149 (60%), Gaps = 6/149 (4%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M LFDDIF+V ++ D + KV+RIEA S + + +DIN+EL+P++V ++
Sbjct: 1 MSTTLFDDIFQVTEV---DLGRYNKVSRIEAHSTSQEFLLTVDINTELFPVRVNDTLTVM 57
Query: 256 LVPTLNPDG--TPDTGYY---VPGNRQSLADNFEYVMYGKLYKISEGSG-REKAELNISF 417
L TL+ DG T G + PG R SLAD+++YVMYG Y+ E +G ++ + SF
Sbjct: 58 LSSTLSIDGSETVQGGSWRAPQPGER-SLADDYDYVMYGTAYRFEEVAGKKDLIAVYYSF 116
Query: 418 GGLLMMMKGDHSHCNKFELDQRLYLLMRK 504
GGLLM ++G++ + + + YLL+R+
Sbjct: 117 GGLLMRLEGNYRGLSNLK-QENAYLLVRR 144
[93][TOP]
>UniRef100_C1GDY9 DNA-directed RNA polymerases i n=1 Tax=Paracoccidioides
brasiliensis Pb18 RepID=C1GDY9_PARBD
Length = 146
Score = 88.6 bits (218), Expect = 3e-16
Identities = 52/146 (35%), Positives = 84/146 (57%), Gaps = 6/146 (4%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
+LF+D F V +N D+K +++V RI S LD+N+ELYP+ G+ +L L
Sbjct: 5 VLFEDTFTVTAIN--DQK-YDRVARISCTSSDNLTIFTLDVNTELYPVATGETLSLALAS 61
Query: 265 TLNPDGTPDTG------YYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGL 426
TL DG D+ V Q+LA++++YV +GK+Y+ EG+ E + +SFGGL
Sbjct: 62 TLALDGKDDSAGGKGAWRDVSMGEQTLANDYDYVCHGKVYRFEEGNTVENMSVFVSFGGL 121
Query: 427 LMMMKGDHSHCNKFELDQRLYLLMRK 504
L+ ++G + + +D +YLLM+K
Sbjct: 122 LLYLEGPYKKLSPLRIDY-IYLLMKK 146
[94][TOP]
>UniRef100_B5RUY9 DEHA2G22902p n=1 Tax=Debaryomyces hansenii RepID=B5RUY9_DEBHA
Length = 148
Score = 88.6 bits (218), Expect = 3e-16
Identities = 54/147 (36%), Positives = 87/147 (59%), Gaps = 5/147 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERF-DMFMHLDINSELYPLKVGQKFAL 252
M ILF+D+F V+ + D + KV+RI +S D+ + LDINSEL+P++ +
Sbjct: 1 MSGILFEDMFNVDSV---DSARYNKVSRITGQSSTSQDIKITLDINSELFPVRDNDSLTI 57
Query: 253 LLVPTLNPDGTPDT--GYYVP--GNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFG 420
+L +L + + T G + P N +SLAD+++YVMYG +YK E S +K + ISFG
Sbjct: 58 MLASSLGNESSMLTSNGSWRPPKSNDRSLADDYDYVMYGTVYKFEENSNNDKMSVYISFG 117
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMR 501
GLLM ++G + + + + Y+L+R
Sbjct: 118 GLLMCLEGGYRSLSNLK-QENAYILIR 143
[95][TOP]
>UniRef100_A6RSE3 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana
B05.10 RepID=A6RSE3_BOTFB
Length = 151
Score = 88.6 bits (218), Expect = 3e-16
Identities = 58/147 (39%), Positives = 82/147 (55%), Gaps = 8/147 (5%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSE-RFDMFMHLDINSELYPLKVGQKFALLLVP 264
LFD+ F V +L D K + +V RI+A S + M LDIN+EL+PL VG ++L
Sbjct: 9 LFDEHFTVNEL---DHKKYVRVGRIKATSTVDHSVSMLLDINTELFPLAVGDNIRVVLAT 65
Query: 265 TLNPDGTPDTGY-------YVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGG 423
+LN DGT D G G SLAD F+YV +GK+YK + + + ISFGG
Sbjct: 66 SLNLDGTKDDGKGWRDANRMGLGGEASLADMFDYVCHGKIYKFEDQENSDLIKAYISFGG 125
Query: 424 LLMMMKGDHSHCNKFELDQRLYLLMRK 504
LLM ++G + +D +YLL++K
Sbjct: 126 LLMGLEGPYKKLTPLRVDY-VYLLVKK 151
[96][TOP]
>UniRef100_A5DF21 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DF21_PICGU
Length = 148
Score = 88.6 bits (218), Expect = 3e-16
Identities = 55/147 (37%), Positives = 88/147 (59%), Gaps = 5/147 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERF-DMFMHLDINSELYPLKVGQKFAL 252
M ILF+D+F VE + D + KV+RI A+S D+ + LDINSEL+P++ +
Sbjct: 1 MSGILFEDMFNVESV---DSARYNKVSRIIAQSSTSQDIKITLDINSELFPVRDHDSLTI 57
Query: 253 LLVPTLNPDGTPDT--GYYVP--GNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFG 420
L +L + + T G + P +SLAD+++YVMYG +YK E +G +K + ISFG
Sbjct: 58 TLASSLGNEQSQVTSSGSWRPPKAGERSLADDYDYVMYGTVYKFEENAGSDKMSVYISFG 117
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMR 501
GLLM ++G++ + + + Y+L+R
Sbjct: 118 GLLMCLEGNYRSLSNLK-QENAYILIR 143
[97][TOP]
>UniRef100_C0SAY2 DNA-directed RNA polymerases i n=2 Tax=Paracoccidioides
brasiliensis RepID=C0SAY2_PARBP
Length = 146
Score = 88.2 bits (217), Expect = 4e-16
Identities = 51/146 (34%), Positives = 84/146 (57%), Gaps = 6/146 (4%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
+LF+D F + +N D+K +++V RI S LD+N+ELYP+ G+ +L L
Sbjct: 5 VLFEDTFTITAIN--DQK-YDRVARISCTSSDNLTIFTLDVNTELYPVATGETLSLALAS 61
Query: 265 TLNPDGTPDTG------YYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGL 426
TL DG D+ V Q+LA++++YV +GK+Y+ EG+ E + +SFGGL
Sbjct: 62 TLALDGKDDSAGGKGAWRDVSMGEQTLANDYDYVCHGKVYRFEEGNTVENMSVFVSFGGL 121
Query: 427 LMMMKGDHSHCNKFELDQRLYLLMRK 504
L+ ++G + + +D +YLLM+K
Sbjct: 122 LLYLEGPYKKLSPLRIDY-IYLLMKK 146
[98][TOP]
>UniRef100_Q92399 DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1
Tax=Schizosaccharomyces pombe RepID=RPAB3_SCHPO
Length = 125
Score = 87.8 bits (216), Expect = 6e-16
Identities = 53/140 (37%), Positives = 83/140 (59%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
+L D+IF V + DK+ +++V+RI A S + DM + LDINS++YPL+ F+L +
Sbjct: 5 VLLDEIFTVTSV---DKQKYQRVSRITAVSGQNDMNLTLDINSQIYPLEKDATFSLQITS 61
Query: 265 TLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMMMKG 444
LN +PD L + +Y+MYGK+Y++ E EK + +SFGGLLM ++G
Sbjct: 62 NLN---SPD-----------LKEAADYIMYGKVYRVEEAKD-EKVSVYVSFGGLLMAIEG 106
Query: 445 DHSHCNKFELDQRLYLLMRK 504
H + LD +YLL+R+
Sbjct: 107 SHRKLYRLSLD-HVYLLLRR 125
[99][TOP]
>UniRef100_Q0CF49 Putative uncharacterized protein n=1 Tax=Aspergillus terreus
NIH2624 RepID=Q0CF49_ASPTN
Length = 145
Score = 87.4 bits (215), Expect = 7e-16
Identities = 49/145 (33%), Positives = 82/145 (56%), Gaps = 5/145 (3%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
+LF+D F + +N +++V+R+ S LD+N+ELYP VG+ ++ +
Sbjct: 5 VLFEDTFTITAINAQK---YDRVSRLTCTSSDNFTTFTLDVNTELYPCAVGESLSMAIAS 61
Query: 265 TLNPDGTPDTGYYVPGNR-----QSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLL 429
TL+ DG D+G V QSLA++++YV +GK+Y+ EGS + ISFGGLL
Sbjct: 62 TLSLDGKEDSGTKVGWREVGMGEQSLANDYDYVCHGKVYRFEEGSTSGNMAVFISFGGLL 121
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRK 504
+ ++G + +D +YLL++K
Sbjct: 122 LYLEGPYKKTAPLRIDY-VYLLLKK 145
[100][TOP]
>UniRef100_Q4P603 Putative uncharacterized protein n=1 Tax=Ustilago maydis
RepID=Q4P603_USTMA
Length = 161
Score = 87.0 bits (214), Expect = 9e-16
Identities = 58/159 (36%), Positives = 83/159 (52%), Gaps = 21/159 (13%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
LFD F V +++PD KK F++V+RI A S DM + +DI ++++P+ GQ+ L T
Sbjct: 6 LFDTQFVVSQIDPDGKK-FDRVSRIIATSPSLDMTLSIDIATDIWPVTEGQQLTFQLAST 64
Query: 268 L-------NPDG----TPDTGYYV----------PGNRQSLADNFEYVMYGKLYKISEGS 384
L PDG T D PGN +AD+F+YVMYGK+Y+ E
Sbjct: 65 LKKETSSAKPDGVDGETQDAAAQAAERDAWRLDQPGN-GGIADDFDYVMYGKIYRYDEKV 123
Query: 385 GREKAELNISFGGLLMMMKGDHSHCNKFELDQRLYLLMR 501
E SFGGL+M + G+ H + + +YLLMR
Sbjct: 124 ADEVTVYG-SFGGLMMALTGNFRHMSNITIGSNVYLLMR 161
[101][TOP]
>UniRef100_B8NG68 DNA-directed RNA polymerases i, ii, and iii 145 kDa polypeptide n=1
Tax=Aspergillus flavus NRRL3357 RepID=B8NG68_ASPFN
Length = 144
Score = 87.0 bits (214), Expect = 9e-16
Identities = 48/144 (33%), Positives = 84/144 (58%), Gaps = 4/144 (2%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
+LF+D F + +N ++ +++V+R+ S LD+N+ELYP G+ ++ L
Sbjct: 5 LLFEDTFTITGVN---QQKYDRVSRLTCTSTDHSSTFTLDVNTELYPCTTGESVSMSLAS 61
Query: 265 TLNPDGTPDTGYY----VPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLM 432
TL+ DG DTG V Q+LA++++YV +GK+Y+ EG+ + + ISFGGLL+
Sbjct: 62 TLSLDGKEDTGSKGWREVGMGEQTLANDYDYVCHGKVYRFEEGTTQGNMAVFISFGGLLL 121
Query: 433 MMKGDHSHCNKFELDQRLYLLMRK 504
++G + +D +YLL++K
Sbjct: 122 YLEGPYKKLAPLRIDY-VYLLLKK 144
[102][TOP]
>UniRef100_B0Y0V7 DNA-directed RNA polymerases i, ii, and iii 145 kDa polypeptide n=2
Tax=Aspergillus fumigatus RepID=B0Y0V7_ASPFC
Length = 145
Score = 86.7 bits (213), Expect = 1e-15
Identities = 49/145 (33%), Positives = 82/145 (56%), Gaps = 5/145 (3%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
+LFDD F + +N + +++V+R+ S LDINSELYP VG+ ++ L
Sbjct: 5 LLFDDTFTITAIN---SQKYDRVSRLSCTSSDSVTTFTLDINSELYPCAVGESVSMALAS 61
Query: 265 TLNPDGTPDTGYY-----VPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLL 429
TL+ DG TG V Q+LA++++YV +GK+Y+ E + + + +SFGGLL
Sbjct: 62 TLSLDGKEATGAKASWREVGAGEQTLANDYDYVCHGKVYRFEEAATQGNMAVFVSFGGLL 121
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRK 504
+ ++G + +D +YLL++K
Sbjct: 122 LYLEGPYKKLAPLRIDY-VYLLLKK 145
[103][TOP]
>UniRef100_A7AQQ3 RNA polymerase subunit 8c, putative n=1 Tax=Babesia bovis
RepID=A7AQQ3_BABBO
Length = 145
Score = 86.3 bits (212), Expect = 2e-15
Identities = 51/140 (36%), Positives = 78/140 (55%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
+F+D F V + D FE+V+RI A+S FD + LDINS+++P+ V +L+
Sbjct: 7 VFEDRFVVRSI---DNSKFERVSRITAKSTGFDAELLLDINSDIFPVTVKSMLHILMTNN 63
Query: 268 LNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMMMKGD 447
L P G+ D + SL ++EY MYGK++K + S E + SFGGLLM + D
Sbjct: 64 LLPSGS-DVNLSDYSDLPSLMRDYEYAMYGKIFKFEDVSS-ETRTIYASFGGLLMSLTAD 121
Query: 448 HSHCNKFELDQRLYLLMRKV 507
+LD R+YL+ R++
Sbjct: 122 KQVIADLDLDMRIYLMARRI 141
[104][TOP]
>UniRef100_Q5CSK9 RNA polymerase II B8 subunit n=2 Tax=Cryptosporidium
RepID=Q5CSK9_CRYPV
Length = 144
Score = 85.9 bits (211), Expect = 2e-15
Identities = 51/145 (35%), Positives = 82/145 (56%)
Frame = +1
Query: 70 VTMVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFA 249
+++ LF+D F + N D F+++ RI RS FD + LDIN+EL+P++ +K +
Sbjct: 1 MSLPSCLFEDRFVI---NSVDSGKFDRIGRIRGRSVGFDADLILDINNELFPVR--EKES 55
Query: 250 LLLVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLL 429
L + + P+ + Q+L D ++YVMYGK+Y++ E ++ L SFGGLL
Sbjct: 56 LYIGLSSQVSVNPNDIVWDNSGPQTLMDQYDYVMYGKIYRVEEKQS-DRRSLYASFGGLL 114
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRK 504
M + D + F LD RLY L+R+
Sbjct: 115 MSLTADKNLVGDFSLDMRLYCLVRR 139
[105][TOP]
>UniRef100_A9VCV6 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9VCV6_MONBE
Length = 137
Score = 85.9 bits (211), Expect = 2e-15
Identities = 39/98 (39%), Positives = 63/98 (64%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
+LF+D+F V +P K+ F++V+R+ F++ + LD+N++LYP+ + +F L L
Sbjct: 5 VLFEDVFTVRDKDPHGKR-FDRVSRVICEGMSFNIELILDLNTQLYPVDLNDRFTLCLAS 63
Query: 265 TLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISE 378
TL+ D PD GYY S ADNF+YVM+G +Y+I +
Sbjct: 64 TLSMDDEPDDGYYNQNRNASRADNFDYVMHGTIYRIED 101
[106][TOP]
>UniRef100_UPI00006CF85E RNA polymerase Rpb8 family protein n=1 Tax=Tetrahymena thermophila
RepID=UPI00006CF85E
Length = 144
Score = 85.5 bits (210), Expect = 3e-15
Identities = 46/142 (32%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Frame = +1
Query: 82 EILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLV 261
+IL +D F++E++ ++K F KV R+ S+ ++ + +DI+++LY +K G ++ +++
Sbjct: 5 DILLEDRFKLEEIKKEEK--FSKVERVVLVSDN-NIKIEIDIHTDLYSMKKGNQYWVMIT 61
Query: 262 PTLNPDGTPDTGYYVPG--NRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMM 435
+L + D G +V +R+S+ D FEYVM+GK+Y ++ + + + SFGGLLM
Sbjct: 62 SSLG-NFQEDKGIFVSEEFDRESIKDKFEYVMHGKIYNMNSDNKAKTVSIFASFGGLLMK 120
Query: 436 MKGDHSHCNKFELDQRLYLLMR 501
+ G F +D R+Y+L+R
Sbjct: 121 VSGKDEDLKNFNVDSRIYILIR 142
[107][TOP]
>UniRef100_B6JZM8 DNA-directed RNA polymerase I n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JZM8_SCHJY
Length = 125
Score = 85.5 bits (210), Expect = 3e-15
Identities = 53/140 (37%), Positives = 82/140 (58%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
IL D+IF V +N + +++V+RI A S + D+ + LDIN++LYPL+ G F+L L
Sbjct: 5 ILVDEIFTVSDVNSEK---YQRVSRITASSAQNDLDLILDINTQLYPLEKGATFSLQLTS 61
Query: 265 TLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMMMKG 444
LN +PD L + +Y+MYGK+Y++ E +K + IS+GGLLM ++G
Sbjct: 62 NLN---SPD-----------LKEAADYIMYGKVYRVEEAKD-DKISVYISYGGLLMSIEG 106
Query: 445 DHSHCNKFELDQRLYLLMRK 504
H + D +YLL+RK
Sbjct: 107 SHRKLYRLSKD-NVYLLLRK 125
[108][TOP]
>UniRef100_A4RHK1 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea
RepID=A4RHK1_MAGGR
Length = 155
Score = 85.5 bits (210), Expect = 3e-15
Identities = 52/146 (35%), Positives = 87/146 (59%), Gaps = 8/146 (5%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFD--MFMHLDINSELYPLKVGQKFALLLV 261
LF+ +F+V ++N ++ +++V RI ARS+ M M LDIN+EL+P+ G+ F ++L
Sbjct: 10 LFEGVFKVTEVN---QQKYDRVARIWARSDASTDLMDMTLDINTELFPMSEGEVFRVVLA 66
Query: 262 PTLNPDGTPD---TGYYVP---GNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGG 423
+L+ DG+ D G+ G +LAD+F+YV +GK+YK + + + ISFGG
Sbjct: 67 TSLSLDGSKDDDKAGWRDATKLGGPATLADSFDYVCHGKIYKFEDSEDGDNIKAYISFGG 126
Query: 424 LLMMMKGDHSHCNKFELDQRLYLLMR 501
LLM + G + +D +YLL++
Sbjct: 127 LLMCLNGPYKKLTPLRVDY-IYLLIK 151
[109][TOP]
>UniRef100_Q5KBG4 DNA-directed RNA polymerases i, ii, and iii 17.1 kDa polypeptide,
putative n=1 Tax=Filobasidiella neoformans
RepID=Q5KBG4_CRYNE
Length = 157
Score = 85.1 bits (209), Expect = 4e-15
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 19/159 (11%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
I+FDD F V+ ++ D KK F++V+RI A S M + LDI +ELYPL+ + F L L
Sbjct: 7 IIFDDRFTVDTVDKDGKK-FDRVSRITATSHSLSMSLTLDIANELYPLEQSETFTLTLAR 65
Query: 265 TLNPDGTPDTGYYVPG-------------------NRQSLADNFEYVMYGKLYKISEGSG 387
+L P G + Q LA++++YVMYGK+ G
Sbjct: 66 SLVPSELETLDSRADGDEGEEGSEVRRVKRELWRSHEQGLAEDYDYVMYGKV-------G 118
Query: 388 REKAELNISFGGLLMMMKGDHSHCNKFELDQRLYLLMRK 504
+ + SFGGLLM ++G + H + + +YLLMRK
Sbjct: 119 KGGSTAYFSFGGLLMALRGSYRHLAGVVVGENVYLLMRK 157
[110][TOP]
>UniRef100_A5E0X3 DNA-directed RNA polymerases I n=1 Tax=Lodderomyces elongisporus
RepID=A5E0X3_LODEL
Length = 148
Score = 85.1 bits (209), Expect = 4e-15
Identities = 54/147 (36%), Positives = 83/147 (56%), Gaps = 5/147 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERF-DMFMHLDINSELYPLKVGQKFAL 252
M +LF+D F V+ +P + KV+RI S D+ + LDINSEL+P+K +
Sbjct: 1 MSSVLFEDSFVVDSTDPGR---YNKVSRITGHSSTAKDITITLDINSELFPVKENDSLTI 57
Query: 253 LLVPTLNPDGTPDT--GYYVPGNRQ--SLADNFEYVMYGKLYKISEGSGREKAELNISFG 420
L +L + + T G + P + S+AD+F+YVMYG +YK E S EK + ISFG
Sbjct: 58 ALASSLGNESSMLTSNGSWRPPKPEDRSIADDFDYVMYGTVYKFEESSDSEKMSVYISFG 117
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMR 501
GLLM ++G + + + + Y+L+R
Sbjct: 118 GLLMRLEGGYRSLSNLK-QENAYILIR 143
[111][TOP]
>UniRef100_C5LB93 RNA polymerase subunit, putative n=1 Tax=Perkinsus marinus ATCC
50983 RepID=C5LB93_9ALVE
Length = 143
Score = 84.7 bits (208), Expect = 5e-15
Identities = 52/146 (35%), Positives = 88/146 (60%), Gaps = 6/146 (4%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
+FDD+F V+ N DD+K F++V+RI+A+S ++ + +DIN+E+YP+ + +
Sbjct: 4 IFDDMFDVK--NIDDEK-FDRVSRIKAQSHTYNAEIEVDINTEIYPIGSSDTLRIAIASA 60
Query: 268 LNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLY-KISEGSGRE----KAELNISFGGLLM 432
+ + GY + + D++EY MYGK+Y K+++ G E + + +SFGGLLM
Sbjct: 61 AD----ANEGYQGESAQPGIIDDYEYAMYGKVYKKMNKTVGTETVASRTIIYVSFGGLLM 116
Query: 433 MMKGDHSHCNK-FELDQRLYLLMRKV 507
++ S ++ LD RLYLL+RKV
Sbjct: 117 KLEAQRSDVDESIRLDDRLYLLIRKV 142
[112][TOP]
>UniRef100_C5L8P4 RNA polymerase subunit, putative n=1 Tax=Perkinsus marinus ATCC
50983 RepID=C5L8P4_9ALVE
Length = 143
Score = 84.7 bits (208), Expect = 5e-15
Identities = 52/146 (35%), Positives = 88/146 (60%), Gaps = 6/146 (4%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
+F+D+F V+ N DD+K F++V+RI+A+S ++ + +DIN+E+YP+ + +
Sbjct: 4 IFEDMFDVK--NIDDEK-FDRVSRIKAQSHTYNAEIEVDINTEIYPIGSSDTLRIAIASA 60
Query: 268 LNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLY-KISEGSGRE----KAELNISFGGLLM 432
+ + GY + + D++EY MYGK+Y K+++ G E + + +SFGGLLM
Sbjct: 61 AD----ANEGYQGEAAQPGIIDDYEYAMYGKVYKKMNKTVGTETVASRTIIYVSFGGLLM 116
Query: 433 MMKGDHSHCNK-FELDQRLYLLMRKV 507
++ S ++ LD RLYLLMRKV
Sbjct: 117 KLEAQRSDVDEAIRLDDRLYLLMRKV 142
[113][TOP]
>UniRef100_B6KK47 RNA polymerase, putative n=3 Tax=Toxoplasma gondii
RepID=B6KK47_TOXGO
Length = 149
Score = 84.7 bits (208), Expect = 5e-15
Identities = 50/145 (34%), Positives = 80/145 (55%), Gaps = 3/145 (2%)
Frame = +1
Query: 79 VEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLL 258
+ LF+D F V + D FE+V R++ +S FD + LD+NS+L+P+K Q+ + +
Sbjct: 3 IPCLFEDRFEVRSV---DCSKFERVARLKGKSSGFDADLQLDVNSDLFPVKEKQRLYIGI 59
Query: 259 VPTLNPDG---TPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLL 429
L+ G D+ + P + ++YVMYGK+++ E S E+ L SFGGLL
Sbjct: 60 TNNLHSSGDARKDDSAWTEPA---AYLKEYDYVMYGKVFRTEECSS-ERRTLYASFGGLL 115
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRK 504
M + D ELD R+Y+L+R+
Sbjct: 116 MALTADKHVVGDLELDMRIYILIRR 140
[114][TOP]
>UniRef100_A1DE77 DNA-directed RNA polymerases i, ii, and iii 145 kDa polypeptide n=1
Tax=Neosartorya fischeri NRRL 181 RepID=A1DE77_NEOFI
Length = 145
Score = 84.7 bits (208), Expect = 5e-15
Identities = 48/145 (33%), Positives = 82/145 (56%), Gaps = 5/145 (3%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
+LF+D F + +N + +++V+R+ S LDINSELYP VG+ ++ L
Sbjct: 5 LLFEDTFTITAIN---SQKYDRVSRLTCTSSDSMTTFTLDINSELYPCAVGESVSMALAS 61
Query: 265 TLNPDGTPDTGYY-----VPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLL 429
TL+ DG TG V Q+LA++++YV +GK+Y+ E + + + +SFGGLL
Sbjct: 62 TLSLDGKEATGAKASWREVGAGEQTLANDYDYVCHGKVYRFEEAATQGNMAVFVSFGGLL 121
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRK 504
+ ++G + +D +YLL++K
Sbjct: 122 LYLEGPYKKLAPLRIDY-VYLLLKK 145
[115][TOP]
>UniRef100_A7TN28 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
DSM 70294 RepID=A7TN28_VANPO
Length = 146
Score = 84.3 bits (207), Expect = 6e-15
Identities = 54/151 (35%), Positives = 86/151 (56%), Gaps = 8/151 (5%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMF-MHLDINSELYPLKVGQKFAL 252
M LFDDIF V ++P + KV+RIEA S + + LDIN++L+P+ V + +
Sbjct: 1 MSNTLFDDIFSVSDVDPGR---YNKVSRIEASSTTQEQCKLTLDINTDLFPVSVQDQITV 57
Query: 253 LLVPTLNPDGTPDTGYYV-------PGNRQSLADNFEYVMYGKLYKISEGSGREKAELNI 411
+V +L+ DG + N +SLAD+++YVMYG YK E S ++ +
Sbjct: 58 AVVTSLSVDGNGENDNSAGRSWRPPQPNERSLADDYDYVMYGTAYKFEEVS-KDLIAIYY 116
Query: 412 SFGGLLMMMKGDHSHCNKFELDQRLYLLMRK 504
SFGGLLM ++G++ + N + + YLL+R+
Sbjct: 117 SFGGLLMRLEGNYRNLNNLK-QENAYLLIRR 146
[116][TOP]
>UniRef100_A3LP63 16-kDa RNA polymerase subunit (Common to polymerases I, II and III)
n=1 Tax=Pichia stipitis RepID=A3LP63_PICST
Length = 148
Score = 84.3 bits (207), Expect = 6e-15
Identities = 53/148 (35%), Positives = 85/148 (57%), Gaps = 5/148 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERF-DMFMHLDINSELYPLKVGQKFAL 252
M ILF+D+F VE D + KV+RI S D+ + LDINSEL+P+K +
Sbjct: 1 MSGILFEDMFVVEST---DSGRYNKVSRITGHSSTSQDIKISLDINSELFPVKANDSLTI 57
Query: 253 LLVPTLNPDGTPDT--GYYVPG--NRQSLADNFEYVMYGKLYKISEGSGREKAELNISFG 420
L +L + + T G + P + +SLAD+++YVMYG +YK E + +K + +SFG
Sbjct: 58 TLASSLGNESSMLTSNGSWRPPKPDDRSLADDYDYVMYGTVYKFEENADNDKMSVYVSFG 117
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMRK 504
GLLM ++G + + + + Y+L+R+
Sbjct: 118 GLLMRLEGGYRSLSNLK-QENAYILIRQ 144
[117][TOP]
>UniRef100_B6AHY6 RNA polymerase II B8 subunit, putative n=1 Tax=Cryptosporidium
muris RN66 RepID=B6AHY6_9CRYT
Length = 144
Score = 83.2 bits (204), Expect = 1e-14
Identities = 50/145 (34%), Positives = 80/145 (55%)
Frame = +1
Query: 70 VTMVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFA 249
+++ LF+D F V N D FE++ RI +S D + LDINS+L+P++ +K +
Sbjct: 1 MSLPSCLFEDRFTV---NSVDSGKFERIGRIRGKSVGLDADLILDINSDLFPVR--EKES 55
Query: 250 LLLVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLL 429
L + + P + Q+L D ++YVMYGK+Y++ E ++ L S+GGLL
Sbjct: 56 LYIGLSTQVSQNPSDVVWDSAAPQTLMDQYDYVMYGKIYRVEEKQS-DRRTLYASYGGLL 114
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRK 504
M + D + F LD RLY L+R+
Sbjct: 115 MALTADKNLVGDFTLDMRLYCLVRR 139
[118][TOP]
>UniRef100_Q4N981 RNA polymerase subunit, putative n=1 Tax=Theileria parva
RepID=Q4N981_THEPA
Length = 145
Score = 82.8 bits (203), Expect = 2e-14
Identities = 51/146 (34%), Positives = 79/146 (54%)
Frame = +1
Query: 70 VTMVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFA 249
+T +F+D F V + D FE+V+R+ A+S FD + LD NS+L + Q
Sbjct: 1 MTTASCVFEDRFLVRSI---DNSKFERVSRLSAKSTGFDAELLLDFNSDLLQVYNKQVLH 57
Query: 250 LLLVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLL 429
+L+ +L P G+ D + SL ++EY MYGK++K E S E + SFGGLL
Sbjct: 58 ILITNSLLPSGS-DVNLSESVDIPSLLGDYEYAMYGKIFKFEEVSS-ETRTIYASFGGLL 115
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRKV 507
M + D +LD ++YLL+R++
Sbjct: 116 MSLTADKQVVADLDLDMKIYLLVRRI 141
[119][TOP]
>UniRef100_Q7SAL1 Related to DNA-directed RNA polymerase chain RPB8 n=1
Tax=Neurospora crassa RepID=Q7SAL1_NEUCR
Length = 152
Score = 82.8 bits (203), Expect = 2e-14
Identities = 49/145 (33%), Positives = 82/145 (56%), Gaps = 6/145 (4%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
LF+D F+VE+++ D K +++V R+ S M LD+N EL+P+KVG+ + L +
Sbjct: 10 LFEDEFKVERIS--DPK-YDRVDRLYCTSVDGQTSMQLDVNKELFPVKVGEYLRIALATS 66
Query: 268 LNPDGTPDT------GYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLL 429
L+ DG+ D + Q+LAD++EYV +GK+YK +G + + +S+GGLL
Sbjct: 67 LSLDGSKDDERGWRDAAKLGSVEQTLADSYEYVCHGKVYKFEDGKDGQTIKAYMSYGGLL 126
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRK 504
M + G + +D +YLL +
Sbjct: 127 MALDGPYKKLTPLRVDY-VYLLANR 150
[120][TOP]
>UniRef100_C5M389 DNA-directed RNA polymerases I n=1 Tax=Candida tropicalis MYA-3404
RepID=C5M389_CANTT
Length = 148
Score = 82.8 bits (203), Expect = 2e-14
Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 5/147 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERF-DMFMHLDINSELYPLKVGQKFAL 252
M ILF+D+F V+ +P + KV RI S D+ + LDINSEL+P++ +
Sbjct: 1 MSGILFEDMFIVDSTDPGR---YNKVCRITGHSSTSKDITITLDINSELFPVQNNDSLTI 57
Query: 253 LLVPTLNPDGTPDT--GYYVP--GNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFG 420
L +L + + T G + P + +SLAD+++YVMYG +YK E S +K + ISFG
Sbjct: 58 TLASSLGNEASMITSNGSWRPPKADDRSLADDYDYVMYGTVYKFEESSDTDKMSVYISFG 117
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMR 501
GLLM ++G + + + + Y+L+R
Sbjct: 118 GLLMRLEGGYRSLSNLK-QENAYILIR 143
[121][TOP]
>UniRef100_UPI0001927769 PREDICTED: similar to RNA polymerase II, polypeptide H, partial n=1
Tax=Hydra magnipapillata RepID=UPI0001927769
Length = 88
Score = 82.4 bits (202), Expect = 2e-14
Identities = 39/76 (51%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = +1
Query: 154 TRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPTLNPDGTPDTG-YYVPGNRQSLA 330
+R+ SE F M + LD+N+++YP+ +G+KF L+LV TL DGTPD G Y + N S A
Sbjct: 1 SRLHCESESFKMDLILDVNTQIYPVDLGEKFRLVLVTTLREDGTPDDGEYNMADNDPSRA 60
Query: 331 DNFEYVMYGKLYKISE 378
D FEYVMYGK+Y+I +
Sbjct: 61 DQFEYVMYGKVYRIDD 76
[122][TOP]
>UniRef100_Q4UGH4 DNA-directed RNA polymerases i, ii, and iii 17.1 kDa polypeptide,
putative n=1 Tax=Theileria annulata RepID=Q4UGH4_THEAN
Length = 145
Score = 82.4 bits (202), Expect = 2e-14
Identities = 51/146 (34%), Positives = 79/146 (54%)
Frame = +1
Query: 70 VTMVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFA 249
+T +F+D F V + D FE+V+R+ A+S FD + LD NS+L + Q
Sbjct: 1 MTTASCVFEDRFLVRSI---DNSKFERVSRLSAKSTGFDAELLLDYNSDLLQVYNKQVLH 57
Query: 250 LLLVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLL 429
+L+ +L P G+ D + SL ++EY MYGK++K E S E + SFGGLL
Sbjct: 58 ILITNSLLPSGS-DVNLSESVDIPSLLGDYEYAMYGKIFKFEEVSS-ETRTIYASFGGLL 115
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRKV 507
M + D +LD ++YLL+R++
Sbjct: 116 MSLTADKQVVADLDLDMKIYLLVRRI 141
[123][TOP]
>UniRef100_P20436 DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=5
Tax=Saccharomyces cerevisiae RepID=RPAB3_YEAST
Length = 146
Score = 82.4 bits (202), Expect = 2e-14
Identities = 58/152 (38%), Positives = 87/152 (57%), Gaps = 9/152 (5%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMF-MHLDINSELYPLKVGQKFAL 252
M LFDDIF+V +++P + KV RIEA S D + LDIN EL+P+ +
Sbjct: 1 MSNTLFDDIFQVSEVDPGR---YNKVCRIEAASTTQDQCKLTLDINVELFPVAAQDSLTV 57
Query: 253 LLVPTLNPDGTPD-----TGYYVP---GNRQSLADNFEYVMYGKLYKISEGSGREKAELN 408
+ +LN + TP T + P G+R SLAD+++YVMYG YK E S ++ +
Sbjct: 58 TIASSLNLEDTPANDSSATRSWRPPQAGDR-SLADDYDYVMYGTAYKFEEVS-KDLIAVY 115
Query: 409 ISFGGLLMMMKGDHSHCNKFELDQRLYLLMRK 504
SFGGLLM ++G++ + N + + YLL+R+
Sbjct: 116 YSFGGLLMRLEGNYRNLNNLK-QENAYLLIRR 146
[124][TOP]
>UniRef100_B8LSY1 DNA-directed RNA polymerases i, ii, and iii 145 kDa polypeptide n=1
Tax=Talaromyces stipitatus ATCC 10500 RepID=B8LSY1_TALSN
Length = 146
Score = 81.6 bits (200), Expect = 4e-14
Identities = 49/145 (33%), Positives = 79/145 (54%), Gaps = 6/145 (4%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
LF+D F + +N + +++V+RI S LDIN+ELYP VG+ ++ L T
Sbjct: 6 LFEDTFTITSIN---SQKYDRVSRISCTSTDNLTTFTLDINTELYPCAVGESLSMALAST 62
Query: 268 LNPDGTPDTGYYVPGNRQ------SLADNFEYVMYGKLYKISEGSGREKAELNISFGGLL 429
L+ DG + G R +LA+ ++YV +GK+Y+ EGS + +SFGGLL
Sbjct: 63 LSLDGKDEDNAASRGWRDVGMGEHTLANEYDYVCHGKVYRFEEGSTSGNMSVFVSFGGLL 122
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRK 504
+ M G ++ +D +YLL++K
Sbjct: 123 LYMDGPYNKLVPLRIDY-VYLLLKK 146
[125][TOP]
>UniRef100_B0EB74 DNA-directed RNA polymerase subunit rpb8, putative n=1
Tax=Entamoeba dispar SAW760 RepID=B0EB74_ENTDI
Length = 143
Score = 81.3 bits (199), Expect = 5e-14
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Frame = +1
Query: 136 KLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPTLNPDGTP---DTGYYV 306
KLFE V+R + E D+ + +DIN++L+PL+ + L L TLN DG+P GY
Sbjct: 18 KLFEGVSRFKLEGE--DLTVFVDINTDLFPLEENDRIKLDLTKTLNRDGSPMDIHQGYSD 75
Query: 307 PGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMMMKGDHSHCNKFELDQRL 486
+ + D+F+YVM G ++K E + + SFGGLL+M+ G + + + ++
Sbjct: 76 NFGKNTKMDDFDYVMSGMVFKFVENKNDDNLSVIASFGGLLLMLYGKPEKLSAYNMKDQV 135
Query: 487 YLLMRK 504
YLL+RK
Sbjct: 136 YLLIRK 141
[126][TOP]
>UniRef100_C8VUX0 DNA-directed RNA polymerases i, ii, and iii 145 kDa polypeptide
(AFU_orthologue; AFUA_5G11120) n=1 Tax=Aspergillus
nidulans FGSC A4 RepID=C8VUX0_EMENI
Length = 145
Score = 81.3 bits (199), Expect = 5e-14
Identities = 50/145 (34%), Positives = 81/145 (55%), Gaps = 5/145 (3%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
+LF+D F V +N + +++V+R+ S LDINSELYP G+ ++ L
Sbjct: 5 LLFEDTFTVTGVNQEK---YDRVSRLTCTSSDSQTTFTLDINSELYPCTTGESLSMALAS 61
Query: 265 TLNPDGTPD---TGYYVPG-NRQSLADNFEYVMYGKLYKISEGSGRE-KAELNISFGGLL 429
TL+ DG D TG+ G Q+LA++++YV +GK+Y+ E S +SFGGLL
Sbjct: 62 TLSLDGKEDGAKTGWREVGMGEQTLANDYDYVCHGKVYRFEEASDSPGNMAAFVSFGGLL 121
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRK 504
+ ++G + +D +YLL++K
Sbjct: 122 LYLEGPYKKLAPLRIDY-VYLLLKK 145
[127][TOP]
>UniRef100_C5FM91 DNA-directed RNA polymerase I n=1 Tax=Microsporum canis CBS 113480
RepID=C5FM91_NANOT
Length = 146
Score = 80.5 bits (197), Expect = 9e-14
Identities = 48/146 (32%), Positives = 81/146 (55%), Gaps = 6/146 (4%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
ILF+D F + +N +++V+RI S + LD+N+E+YP G+ +L L
Sbjct: 5 ILFEDTFSITSINAQK---YDRVSRISCTSTDHLITFTLDVNTEIYPCAPGESLSLALAS 61
Query: 265 TLNPDGTPD-TGYY-----VPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGL 426
TL+ DG + TG V +LA++++YV YGK+Y+ E + +SFGGL
Sbjct: 62 TLSLDGKEEATGERAAWRDVGMGENTLANDYDYVCYGKVYRFEESGTAGNMAVFVSFGGL 121
Query: 427 LMMMKGDHSHCNKFELDQRLYLLMRK 504
L+ + G ++ + ++D +YLLM+K
Sbjct: 122 LLYLDGPYNKLSPLKIDY-VYLLMKK 146
[128][TOP]
>UniRef100_B6Q5W6 DNA-directed RNA polymerases i, ii, and iii 145 kDa polypeptide n=1
Tax=Penicillium marneffei ATCC 18224 RepID=B6Q5W6_PENMQ
Length = 147
Score = 80.5 bits (197), Expect = 9e-14
Identities = 47/146 (32%), Positives = 79/146 (54%), Gaps = 7/146 (4%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
LF+D F + +N + +++V+RI S LD+N+ELYP VG+ ++ L T
Sbjct: 6 LFEDTFTITSIN---SQKYDRVSRISCTSTDNLTTFTLDVNTELYPCAVGESLSMALAST 62
Query: 268 LNPDGTPDTGYYVPGN-------RQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGL 426
L+ DG + G +LA+ ++YV +GK+Y+ EGS + + +SFGGL
Sbjct: 63 LSLDGKDEDASAGRGGWRDVGMGEHTLANEYDYVCHGKVYRFEEGSTQGNMSVFVSFGGL 122
Query: 427 LMMMKGDHSHCNKFELDQRLYLLMRK 504
L+ M G ++ +D +YLL++K
Sbjct: 123 LLYMDGPYNKLVPLRIDY-VYLLIKK 147
[129][TOP]
>UniRef100_A1CB62 DNA-directed RNA polymerases i, ii, and iii 145 kDa polypeptide n=1
Tax=Aspergillus clavatus RepID=A1CB62_ASPCL
Length = 145
Score = 80.1 bits (196), Expect = 1e-13
Identities = 45/145 (31%), Positives = 80/145 (55%), Gaps = 5/145 (3%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
+LF+D F + +N +++V+R+ S LD+N+ELYP VG+ ++ L
Sbjct: 5 LLFEDTFTITGINAQK---YDRVSRLTCTSSDSLTTFTLDVNTELYPCSVGESLSMALAS 61
Query: 265 TLNPDGTPDTG-----YYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLL 429
TL+ DG TG V +LA++++YV +GK+Y+ E + + + +SFGGLL
Sbjct: 62 TLSLDGKEATGGKASWREVGAGELTLANDYDYVCHGKVYRFEEAATQGNMAVFVSFGGLL 121
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRK 504
+ ++G + +D +YLL++K
Sbjct: 122 LYLEGPYKKLAPLRIDY-VYLLLKK 145
[130][TOP]
>UniRef100_Q4YTQ9 RNA polymerase subunit 8c, putative n=1 Tax=Plasmodium berghei
RepID=Q4YTQ9_PLABE
Length = 143
Score = 79.7 bits (195), Expect = 2e-13
Identities = 51/141 (36%), Positives = 81/141 (57%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
ILF+D F + + D FEKV+RI+A+S +D + LD++SEL+ KV +K A+ L
Sbjct: 5 ILFEDRFVISNV---DNSKFEKVSRIKAKSTGYDAELILDVHSELF--KVEEKKAIYLAL 59
Query: 265 TLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMMMKG 444
N G D + + +SL +N EY+M G+++K E S E+ + S+GGL+M +
Sbjct: 60 QDNFMGKNDDKTWEQADNKSL-NNIEYIMSGRIFKFEELSS-ERRTVYASYGGLMMALTA 117
Query: 445 DHSHCNKFELDQRLYLLMRKV 507
D E+D ++YLL + V
Sbjct: 118 DKQFIGDLEIDMKIYLLAKNV 138
[131][TOP]
>UniRef100_C4LZP1 RNA polymerase subunit Rpb8 n=1 Tax=Entamoeba histolytica HM-1:IMSS
RepID=C4LZP1_ENTHI
Length = 143
Score = 79.7 bits (195), Expect = 2e-13
Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Frame = +1
Query: 136 KLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPTLNPDGTP---DTGYYV 306
K+FE V+R + E D+ + +DIN++L+PL+ + L L TLN DG+P GY
Sbjct: 18 KIFEGVSRFKLEGE--DLTVFVDINTDLFPLEEHDRIKLDLTKTLNRDGSPMDIHQGYSD 75
Query: 307 PGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMMMKGDHSHCNKFELDQRL 486
+ + D+F+YVM G ++K E + + SFGGLL+M+ G + + + ++
Sbjct: 76 NFGKNTKMDDFDYVMSGMVFKFVENKNDDNLSVIASFGGLLLMLYGKPEKLSAYNMKDQV 135
Query: 487 YLLMRK 504
YLL+RK
Sbjct: 136 YLLIRK 141
[132][TOP]
>UniRef100_B9WLS3 DNA-directed RNA polymerase subunit common to I, II, and III,
putative n=1 Tax=Candida dubliniensis CD36
RepID=B9WLS3_CANDC
Length = 148
Score = 79.7 bits (195), Expect = 2e-13
Identities = 51/147 (34%), Positives = 84/147 (57%), Gaps = 5/147 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERF-DMFMHLDINSELYPLKVGQKFAL 252
M ILF+D+F V+ +P + KV+RI S D+ + LDIN EL+P++ +
Sbjct: 1 MSGILFEDMFIVDSTDPGR---YNKVSRITGHSSTSKDITITLDINKELFPVQNHDSLTI 57
Query: 253 LLVPTLNPDGTPDT--GYYVPG--NRQSLADNFEYVMYGKLYKISEGSGREKAELNISFG 420
L +L + + T G + P + +SLAD+++YVMYG +YK E + +K + ISFG
Sbjct: 58 TLASSLGNESSMITSNGSWRPPKFDDKSLADDYDYVMYGTIYKFEENTDNDKMAVYISFG 117
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMR 501
GLLM ++G + + + + Y+L+R
Sbjct: 118 GLLMRLEGGYRSLSNLK-QENAYILIR 143
[133][TOP]
>UniRef100_Q59MZ8 DNA-directed RNA polymerases I n=1 Tax=Candida albicans
RepID=Q59MZ8_CANAL
Length = 148
Score = 79.3 bits (194), Expect = 2e-13
Identities = 51/147 (34%), Positives = 83/147 (56%), Gaps = 5/147 (3%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERF-DMFMHLDINSELYPLKVGQKFAL 252
M ILF+D+F V+ +P + KV RI S D+ + LDIN EL+P++ +
Sbjct: 1 MSGILFEDMFIVDSTDPGR---YNKVCRITGHSSTSKDITITLDINKELFPVQNHDSLTI 57
Query: 253 LLVPTLNPDGTPDT--GYYVPG--NRQSLADNFEYVMYGKLYKISEGSGREKAELNISFG 420
L +L + + T G + P + +SLAD+++YVMYG +YK E + +K + ISFG
Sbjct: 58 TLASSLGNESSMITSNGSWRPPKPDERSLADDYDYVMYGTVYKFEENADNDKMAVYISFG 117
Query: 421 GLLMMMKGDHSHCNKFELDQRLYLLMR 501
GLLM ++G + + + + Y+L+R
Sbjct: 118 GLLMRLEGGYRSLSNLK-QENAYILIR 143
[134][TOP]
>UniRef100_Q4XTM7 RNA polymerase subunit 8c, putative n=1 Tax=Plasmodium chabaudi
RepID=Q4XTM7_PLACH
Length = 143
Score = 79.0 bits (193), Expect = 3e-13
Identities = 51/141 (36%), Positives = 81/141 (57%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
ILF+D F + + D FEKV+RI+A+S +D + LD++SEL+ KV +K A+ L
Sbjct: 5 ILFEDRFVISNV---DNSKFEKVSRIKAKSTGYDAELILDVHSELF--KVEEKKAIYLAL 59
Query: 265 TLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMMMKG 444
N G D + + +SL +N EY+M G+++K E S E+ + S+GGL+M +
Sbjct: 60 QDNFMGYSDDKTWEQTDNKSL-NNIEYIMSGRIFKFEELSS-ERRTVYASYGGLMMALTA 117
Query: 445 DHSHCNKFELDQRLYLLMRKV 507
D E+D ++YLL + V
Sbjct: 118 DKQFIGDLEIDMKIYLLAKNV 138
[135][TOP]
>UniRef100_Q0UHX8 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0UHX8_PHANO
Length = 148
Score = 79.0 bits (193), Expect = 3e-13
Identities = 50/146 (34%), Positives = 79/146 (54%), Gaps = 7/146 (4%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
LF++ F V K+N K+ +++V R+ S + LDIN EL+P+ G ++L T
Sbjct: 6 LFEENFIVTKVN---KEKYDRVHRLSGTSTDGSLTFTLDINHELWPVAEGSTINIVLATT 62
Query: 268 LNPDGTPDTGYYVP------GNRQSLADNFEYVMYGKLYKISEG-SGREKAELNISFGGL 426
L DGT G N +LAD FEYV YGK Y+ + +G E + SFGG+
Sbjct: 63 LALDGTTKEGAETSWRNVSRSNTATLADLFEYVCYGKNYRFEDAEAGAETVKYYASFGGM 122
Query: 427 LMMMKGDHSHCNKFELDQRLYLLMRK 504
L+ ++G + N ++D+ +Y+L +K
Sbjct: 123 LLYIEGPYRKLNGLKIDE-IYMLCKK 147
[136][TOP]
>UniRef100_C4R273 RNA polymerase subunit ABC14.5, common to RNA polymerases I, II,
and III n=1 Tax=Pichia pastoris GS115 RepID=C4R273_PICPG
Length = 145
Score = 79.0 bits (193), Expect = 3e-13
Identities = 51/150 (34%), Positives = 83/150 (55%), Gaps = 7/150 (4%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMF-MHLDINSELYPLKVGQKFAL 252
M LFDDIF V+ + D + KV+RI S + LDIN+E++P+ +
Sbjct: 1 MSSALFDDIFTVQTV---DNGRYNKVSRIIGISTTNSAIKLTLDINNEMFPVSQDDSLTV 57
Query: 253 LLVPTLNPDGTPDTGYYVPGNR------QSLADNFEYVMYGKLYKISEGSGREKAELNIS 414
L +L+ DG ++ + R +SLAD+++YVM+G +YK EG +K ++ +S
Sbjct: 58 TLANSLSLDGEDESANFSKSWRPPKPTDKSLADDYDYVMFGTVYKFEEGD-EDKIKVYVS 116
Query: 415 FGGLLMMMKGDHSHCNKFELDQRLYLLMRK 504
FGGLLM ++G + + D LY+L+R+
Sbjct: 117 FGGLLMCLEGGYKSLASLKQD-NLYILIRR 145
[137][TOP]
>UniRef100_C5PI80 RNA polymerase Rpb8 family protein n=1 Tax=Coccidioides posadasii
C735 delta SOWgp RepID=C5PI80_COCP7
Length = 146
Score = 78.2 bits (191), Expect = 4e-13
Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 6/146 (4%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
ILF+D F + +N +++V+RI S LD+NSELYP G+ +L L
Sbjct: 5 ILFEDTFTITSINAQK---YDRVSRISCTSTDQLTTFTLDVNSELYPCAPGESLSLALAS 61
Query: 265 TLNPDGTPDTG------YYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGL 426
TL DG + V +LA++++YV YGK+Y+ + S + +SFGGL
Sbjct: 62 TLALDGKDEGAGGRAVWRDVGMGETTLANDYDYVCYGKVYRFEDSSTAGNMAVFVSFGGL 121
Query: 427 LMMMKGDHSHCNKFELDQRLYLLMRK 504
L+ + G + N +D +YLL++K
Sbjct: 122 LLYLDGPYKKLNPLRIDY-VYLLIKK 146
[138][TOP]
>UniRef100_A5JZU8 RNA polymerase subunit 8c, putative n=1 Tax=Plasmodium vivax
RepID=A5JZU8_PLAVI
Length = 143
Score = 76.3 bits (186), Expect = 2e-12
Identities = 51/141 (36%), Positives = 78/141 (55%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
ILF+D F + + D FEKV+RI+A+S +D + LD++SEL+ KV +K A+ L
Sbjct: 5 ILFEDRFVISSV---DNSKFEKVSRIKAKSTGYDAELILDVHSELF--KVEEKKAIYLAL 59
Query: 265 TLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMMMKG 444
D + G SL +N EY+M G+++K E S E+ + SFGGL+M +
Sbjct: 60 QDKILSKNDDKIWEQGENISL-NNIEYIMSGRIFKFEELSS-ERRTVYASFGGLMMALTT 117
Query: 445 DHSHCNKFELDQRLYLLMRKV 507
D E+D ++YLL + V
Sbjct: 118 DKQFIGDLEIDMKIYLLTKNV 138
[139][TOP]
>UniRef100_B2WGK3 DNA-directed RNA polymerases I n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2WGK3_PYRTR
Length = 146
Score = 75.9 bits (185), Expect = 2e-12
Identities = 48/144 (33%), Positives = 81/144 (56%), Gaps = 6/144 (4%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
+F++ F + +N + +++V+RI S + M LDIN EL+P+ G L+L T
Sbjct: 6 VFEETFNITSINNEK---YDRVSRIYGTSTDNQITMTLDINHELFPVSTGASLNLVLATT 62
Query: 268 LNPDGTP----DTGYYVPGNR--QSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLL 429
L DG+ DT + G + +LAD ++YV YGK Y++ G G + + SFGGLL
Sbjct: 63 LALDGSAKGENDTMWRNVGKQGVTTLADMYDYVCYGKNYRMEGGDG-DTIKYYASFGGLL 121
Query: 430 MMMKGDHSHCNKFELDQRLYLLMR 501
+ M+G H + ++D +Y+L++
Sbjct: 122 LYMEGPHRKLSGLKIDD-IYMLIK 144
[140][TOP]
>UniRef100_C4JDN2 Putative uncharacterized protein n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JDN2_UNCRE
Length = 146
Score = 75.5 bits (184), Expect = 3e-12
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 6/146 (4%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
ILF+D F + +N +++V+RI S LD+N+ELY G+ +L L
Sbjct: 5 ILFEDTFSITSVNAQK---YDRVSRISCMSSDQLTTFTLDVNTELYACSPGESLSLALAS 61
Query: 265 TLNPDGTPDTG------YYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGL 426
TL DG + V +LA++++YV YGK+Y+ E S + +SFGGL
Sbjct: 62 TLALDGKEEGAGGRAMWRDVGMGETTLANDYDYVCYGKVYRFEESSTAGNMAVFVSFGGL 121
Query: 427 LMMMKGDHSHCNKFELDQRLYLLMRK 504
L+ + G + N +D +YLL++K
Sbjct: 122 LLYLDGPYKKLNPLRIDY-VYLLIKK 146
[141][TOP]
>UniRef100_Q1E9U7 Putative uncharacterized protein n=1 Tax=Coccidioides immitis
RepID=Q1E9U7_COCIM
Length = 146
Score = 74.7 bits (182), Expect = 5e-12
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 6/146 (4%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
ILF+D F + +N +++V+RI S LD+NSELY G+ +L L
Sbjct: 5 ILFEDTFTITSINAQK---YDRVSRISCTSTDQLTTFTLDVNSELYRCAPGESLSLALAS 61
Query: 265 TLNPDGTPDTG------YYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGL 426
TL DG + V +LA++++YV YGK+Y+ + S + +SFGGL
Sbjct: 62 TLALDGKDEGAGGRAVWRDVGMGETTLANDYDYVCYGKVYRFEDSSTAGNMAVFVSFGGL 121
Query: 427 LMMMKGDHSHCNKFELDQRLYLLMRK 504
L+ + G + N +D +YLL++K
Sbjct: 122 LLYLDGPYKKLNPLRIDY-VYLLIKK 146
[142][TOP]
>UniRef100_A8QQK8 POLR2H protein n=3 Tax=Eutheria RepID=A8QQK8_BOVIN
Length = 84
Score = 73.9 bits (180), Expect = 8e-12
Identities = 36/78 (46%), Positives = 53/78 (67%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL 255
M ILF+DIF V+ ++P+ KK F++V+R+ SE F M + LD+N ++YP+ +G KF L+
Sbjct: 1 MAGILFEDIFDVKDIDPEGKK-FDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLV 59
Query: 256 LVPTLNPDGTPDTGYYVP 309
+ TL DGT D G Y P
Sbjct: 60 IASTLYEDGTLDDGEYNP 77
[143][TOP]
>UniRef100_Q6FPG2 Similar to uniprot|P20436 Saccharomyces cerevisiae YOR224c RPB8 n=1
Tax=Candida glabrata RepID=Q6FPG2_CANGA
Length = 150
Score = 73.9 bits (180), Expect = 8e-12
Identities = 53/156 (33%), Positives = 87/156 (55%), Gaps = 13/156 (8%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMF-MHLDINSELYPLKVGQKFAL 252
M LFDDIF + +++P + V RIEA S + + LDIN+ L+P++V ++ +
Sbjct: 1 MSTTLFDDIFTISEVDPGR---YNNVCRIEAGSTTQEQCKLTLDINTNLFPVQVNEQLTV 57
Query: 253 LLVPTLNPDG------TPDTGYY------VPGNRQSLADNFEYVMYGKLYKISEGSGREK 396
+ +L+ D TG PG+R SLAD+++YVM+G YK E S ++
Sbjct: 58 TVASSLDVDDDDKAKVNDSTGASRSWRPPQPGDR-SLADDYDYVMHGTAYKFEEVS-KDV 115
Query: 397 AELNISFGGLLMMMKGDHSHCNKFELDQRLYLLMRK 504
+ SFGGLLM ++G++ + N + + YLL+R+
Sbjct: 116 IAVYYSFGGLLMRLEGNYRNLNNLK-QETAYLLIRR 150
[144][TOP]
>UniRef100_C5DXP3 ZYRO0F06644p n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DXP3_ZYGRC
Length = 145
Score = 73.6 bits (179), Expect = 1e-11
Identities = 49/150 (32%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Frame = +1
Query: 76 MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMF-MHLDINSELYPLKVGQKFAL 252
M LFDD+F V ++P + +V RIEA S + + LD+N++L+P++ G++
Sbjct: 1 MSNTLFDDVFLVADVDPGK---YNRVARIEATSTTQEHCKLALDVNTDLFPVQTGEQVTA 57
Query: 253 LLVPTL-------NPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNI 411
+ +L +P T PG R SLAD+++YVM+G Y+ E S + +
Sbjct: 58 TIASSLELEKNVNDPSATRSWRPPQPGER-SLADDYDYVMHGTAYRFEEVS-NDLIAVYY 115
Query: 412 SFGGLLMMMKGDHSHCNKFELDQRLYLLMR 501
SFGGLLM ++G++ N + + LL R
Sbjct: 116 SFGGLLMRLEGNYRSLNNLKQENAFLLLRR 145
[145][TOP]
>UniRef100_C9SUL5 DNA-directed RNA polymerases I n=1 Tax=Verticillium albo-atrum
VaMs.102 RepID=C9SUL5_9PEZI
Length = 152
Score = 72.8 bits (177), Expect = 2e-11
Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 8/147 (5%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
LF++ F + D+ +++V RI A S M LDIN EL+P V ++L +
Sbjct: 10 LFEESFTITNF---DQSKYDRVARISATSADNQTVMTLDINIELFPCAVSDNLHVVLATS 66
Query: 268 LNPDGTPDT--GYYVP------GNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGG 423
L DG+ D G+ G +LAD F+YV +GK+YK + + + +SFGG
Sbjct: 67 LAHDGSKDEEKGWRDVAKGSGGGAEATLADMFDYVCHGKIYKFEDADDGQIIKAYVSFGG 126
Query: 424 LLMMMKGDHSHCNKFELDQRLYLLMRK 504
+LM ++G + +D YLL++K
Sbjct: 127 MLMSLEGPYKKLTPLRVDY-TYLLIKK 152
[146][TOP]
>UniRef100_B3LCD3 Rna polymerase subunit 8c, putative n=1 Tax=Plasmodium knowlesi
strain H RepID=B3LCD3_PLAKH
Length = 143
Score = 72.4 bits (176), Expect = 2e-11
Identities = 48/141 (34%), Positives = 77/141 (54%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
+LF+D F + + D FEKV+RI+A+S +D + LD++SEL+ KV +K A+ L
Sbjct: 5 VLFEDRFVISSV---DNSKFEKVSRIKAKSTGYDAELILDVHSELF--KVEEKKAIYLAL 59
Query: 265 TLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMMMKG 444
D + +L +N EY+M G+++K E S E+ + SFGGL+M +
Sbjct: 60 QDKILNKNDDKIWEQSENIAL-NNIEYIMSGRIFKFEELSS-ERRTVYASFGGLMMALTT 117
Query: 445 DHSHCNKFELDQRLYLLMRKV 507
D E+D ++YLL + V
Sbjct: 118 DKQFIGDLEIDMKIYLLTKNV 138
[147][TOP]
>UniRef100_Q8I5R8 RNA polymerase subunit 8c, putative n=1 Tax=Plasmodium falciparum
3D7 RepID=Q8I5R8_PLAF7
Length = 145
Score = 72.0 bits (175), Expect = 3e-11
Identities = 50/144 (34%), Positives = 80/144 (55%), Gaps = 3/144 (2%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLV- 261
ILF+D F + + D FEKV+RI+A+S +D + LD++SEL+ KV +K A+ L
Sbjct: 5 ILFEDRFVISSV---DNSKFEKVSRIKAKSTGYDAELILDVHSELF--KVEEKKAIYLAL 59
Query: 262 --PTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMM 435
LN + + G+ N +N EY+M G+++K E S E+ + SFGGL+M
Sbjct: 60 QDKLLNRN--DEKGW--EQNENVPLNNIEYIMSGRIFKFEELSS-ERRTVYASFGGLMMA 114
Query: 436 MKGDHSHCNKFELDQRLYLLMRKV 507
+ D E+D ++YLL + +
Sbjct: 115 LTTDKQFIGDLEIDMKIYLLTKNI 138
[148][TOP]
>UniRef100_Q7RN09 DNA-directed RNA polymerases i, ii, and iii 17.1 kDa polypeptide
n=1 Tax=Plasmodium yoelii yoelii RepID=Q7RN09_PLAYO
Length = 160
Score = 71.2 bits (173), Expect = 5e-11
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 15/156 (9%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPL------------ 228
ILF+D F + + D FEKV+RI+A+S +D + LD++SEL+ +
Sbjct: 5 ILFEDRFVISNV---DNSKFEKVSRIKAKSTGYDAELILDVHSELFKVEEKKVAQIIKKR 61
Query: 229 ---KVGQKFALLLVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKA 399
K+ A+ L N G D + + +SL +N EY+M G+++K E S E+
Sbjct: 62 EKKKLNHHHAIYLALQDNFMGKNDEKTWEQTDNKSL-NNIEYIMSGRIFKFEELSS-ERR 119
Query: 400 ELNISFGGLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
+ S+GGL+M + D E+D ++YLL + V
Sbjct: 120 TVYASYGGLMMALTADKQFIGDLEIDMKIYLLAKNV 155
[149][TOP]
>UniRef100_A2D8U6 RNA polymerase Rpb8 family protein n=1 Tax=Trichomonas vaginalis G3
RepID=A2D8U6_TRIVA
Length = 146
Score = 70.9 bits (172), Expect = 7e-11
Identities = 43/137 (31%), Positives = 76/137 (55%), Gaps = 3/137 (2%)
Frame = +1
Query: 103 FRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPTLNPD- 279
FR ++PD K+ F+ V+RI+A ++ D + LD N +Y +K Q F L + L+ D
Sbjct: 8 FRCTAVDPDGKQ-FDDVSRIKATTDEGDYELVLDYNCFIYEIKQDQLFQLNISTQLHSDE 66
Query: 280 GTPDTGYYVPG--NRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMMMKGDHS 453
+ ++ P +LA ++EY+M+GK+Y E +A + +S+GGLLM + GD +
Sbjct: 67 ASRAEEHWHPSIVENSTLAASYEYIMHGKVYNYEEQPETNRATVYVSYGGLLMSLTGDRN 126
Query: 454 HCNKFELDQRLYLLMRK 504
+ + +YLL+ +
Sbjct: 127 TIAGIQRGKEVYLLISR 143
[150][TOP]
>UniRef100_C7Z907 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7Z907_NECH7
Length = 148
Score = 70.1 bits (170), Expect = 1e-10
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
LF++ F V D+ +++V RI S M LDIN EL+P V ++L T
Sbjct: 8 LFEESFTVTDY---DQSKYDRVARISCTSSDSQTVMTLDINIELFPCAVSDTLHVVLSTT 64
Query: 268 LNPDGTPDT--GYYVPGNR----QSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLL 429
L+ DG+ + G+ G ++AD ++YV +GK+YK E +SFGGLL
Sbjct: 65 LSLDGSKEEEKGWRDVGKNGDAPATIADLYDYVCHGKIYKFEETYDGNSINAYVSFGGLL 124
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRK 504
M ++G +D +YLL++K
Sbjct: 125 MSLQGPVKKLTPLRVD-NVYLLVKK 148
[151][TOP]
>UniRef100_A6QU50 DNA-directed RNA polymerases i n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6QU50_AJECN
Length = 129
Score = 69.7 bits (169), Expect = 2e-10
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
+LF+D F + +N +++V RI S LD+N+ELYP+ +G+ +L L
Sbjct: 5 VLFEDTFTITAINAQK---YDRVARINCTSSDNLTTFTLDVNTELYPVAMGESLSLALAS 61
Query: 265 TLNPDGTPDTG------YYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGL 426
TL DG D+ V Q+LA++++YV +GK+Y+ EG+ E + +SFG
Sbjct: 62 TLALDGKDDSAGGRGAWRDVGMGDQTLANDYDYVCHGKVYRFEEGNTAENMSVFVSFGRS 121
Query: 427 LMMMKG 444
++ G
Sbjct: 122 FALLGG 127
[152][TOP]
>UniRef100_UPI000023F4E5 hypothetical protein FG04273.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023F4E5
Length = 148
Score = 68.9 bits (167), Expect = 3e-10
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
LF++ F V + D+ +++V RI S M LDIN EL+P G ++L T
Sbjct: 8 LFEESFTVMEY---DQSKYDRVARIHCTSADSQTIMSLDINIELFPCVRGDSLHVVLTTT 64
Query: 268 LNPDGTPDT--GYYVPGNR----QSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLL 429
L DG+ + G+ G ++AD ++YV +GK+YK E +SFGGLL
Sbjct: 65 LALDGSKEEEKGWRDVGKGGDAPATIADLYDYVCHGKIYKFEETFDGNTINAYVSFGGLL 124
Query: 430 MMMKGDHSHCNKFELDQRLYLLMRK 504
M ++G +D +YLL++K
Sbjct: 125 MSLQGPVKKLTPLRVD-NVYLLVKK 148
[153][TOP]
>UniRef100_C9JUA8 Putative uncharacterized protein POLR2H n=1 Tax=Homo sapiens
RepID=C9JUA8_HUMAN
Length = 86
Score = 67.8 bits (164), Expect = 6e-10
Identities = 37/107 (34%), Positives = 58/107 (54%)
Frame = +1
Query: 187 MFMHLDINSELYPLKVGQKFALLLVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLY 366
M + LD+N ++YP+ +G KF L++ TL DGT D G Y P +
Sbjct: 1 MDLILDVNIQIYPVDLGDKFRLVIASTLYEDGTLDDGEYNPTD----------------- 43
Query: 367 KISEGSGREKAELNISFGGLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
R + +S+GGLLM ++GD ++ + FE+D R+YLLM+K+
Sbjct: 44 ------DRPSSSAYVSYGGLLMRLQGDANNLHGFEVDSRVYLLMKKL 84
[154][TOP]
>UniRef100_B7Q9V8 DNA-directed RNA polymerase subunit rpb8, putative n=1 Tax=Ixodes
scapularis RepID=B7Q9V8_IXOSC
Length = 75
Score = 67.4 bits (163), Expect = 8e-10
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = +1
Query: 187 MFMHLDINSELYPLKVGQKFALLLVPTLNPDGTPDTGYYVPGNR-QSLADNFEYVMYGKL 363
M + LD+N +LYP+ +G KF L++ TL DG PD G Y P + S +D+FEYVMYGK+
Sbjct: 1 MDLILDVNIQLYPVDLGDKFRLVIATTLREDGYPDDGEYNPADTGPSRSDSFEYVMYGKI 60
Query: 364 YKI 372
Y+I
Sbjct: 61 YRI 63
[155][TOP]
>UniRef100_Q4DCA7 RNA polymerase B subunit RPB8, putative n=1 Tax=Trypanosoma cruzi
RepID=Q4DCA7_TRYCR
Length = 149
Score = 67.0 bits (162), Expect = 1e-09
Identities = 38/147 (25%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Frame = +1
Query: 79 VEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLL 258
V ++ +D F V LNPD ++ KV+RI+ ++ER ++ + DIN+E +P+ + + ++L
Sbjct: 4 VPVILEDTFTVTALNPDGV-VYIKVSRIQCKNERGNITITSDINTEEFPVSLDDRLTIML 62
Query: 259 VPTLNPDGTPDTGYYVPG--NRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLM 432
++ G +Y +R++ + +Y M+G++Y +++IS GGLL
Sbjct: 63 ANSIELSGQSGAKHYDQSVYHRETRLQDCDYAMHGRVYGHEVDESSLDVKVHISCGGLLT 122
Query: 433 MMKGDHSHCNKFELDQRLYLLMRKV*K 513
+ G + +Y+L+++V K
Sbjct: 123 QVIGTPQSLRDIHYNSDVYILIKRVGK 149
[156][TOP]
>UniRef100_Q5BGY8 Putative uncharacterized protein n=1 Tax=Emericella nidulans
RepID=Q5BGY8_EMENI
Length = 128
Score = 66.6 bits (161), Expect = 1e-09
Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 4/104 (3%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
+LF+D F V +N + +++V+R+ S LDINSELYP G+ ++ L
Sbjct: 5 LLFEDTFTVTGVNQEK---YDRVSRLTCTSSDSQTTFTLDINSELYPCTTGESLSMALAS 61
Query: 265 TLNPDGTPD---TGYYVPG-NRQSLADNFEYVMYGKLYKISEGS 384
TL+ DG D TG+ G Q+LA++++YV +GK+Y+ E S
Sbjct: 62 TLSLDGKEDGAKTGWREVGMGEQTLANDYDYVCHGKVYRFEEAS 105
[157][TOP]
>UniRef100_Q40944 DNA directed RNA polymerase subunit I/II/III n=1 Tax=Bigelowiella
natans RepID=Q40944_BIGNA
Length = 147
Score = 63.9 bits (154), Expect = 9e-09
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Frame = +1
Query: 94 DDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPTLN 273
+DI ++ +PD K L+EKV+RI A+S +M + DINS L+P+ VG L + T++
Sbjct: 11 NDIIKILSKDPDGK-LYEKVSRIIAQSYYLNMELWFDINSHLFPIYVGDSLNLSIY-TIS 68
Query: 274 PDGTPDTGYYVPGNRQS-LADNFEYVMYGKLYKISEGSGREKA--ELNISFGGLLMMMKG 444
+ T + N+ S L D +EY M GK++ I RE + + SFGGLL+ +K
Sbjct: 69 DESFNST---IKDNQFSYLVDKYEYFMIGKVFNIITSIERETSFNLIYASFGGLLLKLKV 125
Query: 445 DHSHCNKFELDQRLYLLMRKV 507
+ F + L L + ++
Sbjct: 126 KKKYLKSFLPNSHLCLGLNRL 146
[158][TOP]
>UniRef100_Q5DAE1 SJCHGC08401 protein n=1 Tax=Schistosoma japonicum
RepID=Q5DAE1_SCHJA
Length = 121
Score = 63.5 bits (153), Expect = 1e-08
Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 15/122 (12%)
Frame = +1
Query: 187 MFMHLDINSELYPLKVGQKFALLLVPTL------------NPDGTPDTGYYVPGNRQSLA 330
M + LDI++ +Y L G KF ++L TL D +T + ++ +
Sbjct: 1 MGLILDIHALIYSLTKGDKFRMVLTKTLLNELTVDADDDDEDDAADETDEKLANSKMA-- 58
Query: 331 DNFEYVMYGKLYKI-SEGSGREKAELN--ISFGGLLMMMKGDHSHCNKFELDQRLYLLMR 501
F+YV YGK+Y+I ++ SG + + L+ +SFGGLLM + GD S+ F + + LYL+++
Sbjct: 59 -EFDYVCYGKIYRIETQDSGVDASRLSCYVSFGGLLMQLTGDASNLQGFRVGKHLYLMIK 117
Query: 502 KV 507
K+
Sbjct: 118 KL 119
[159][TOP]
>UniRef100_C0NP05 DNA-directed RNA polymerase I n=2 Tax=Ajellomyces capsulatus
RepID=C0NP05_AJECG
Length = 114
Score = 63.2 bits (152), Expect = 1e-08
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
+LF+D F + +N +++V RI S LD+N+ELYP+ +G+ +L L
Sbjct: 5 VLFEDTFTITAINAQK---YDRVARISCTSSDNLTTFTLDVNTELYPVAMGESLSLALAS 61
Query: 265 TLNPDGTPDTG------YYVPGNRQSLADNFEYVMYGKLYKISEGSGRE 393
TL DG D+ V Q+LA++++YV +GK+Y+ EG+ E
Sbjct: 62 TLALDGKDDSAGGRGAWRDVGMGEQTLANDYDYVCHGKVYRFEEGNTAE 110
[160][TOP]
>UniRef100_Q2H0W3 Putative uncharacterized protein n=1 Tax=Chaetomium globosum
RepID=Q2H0W3_CHAGB
Length = 116
Score = 62.8 bits (151), Expect = 2e-08
Identities = 39/103 (37%), Positives = 63/103 (61%), Gaps = 6/103 (5%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
LF++ FR+E+L D+K +++V RI +SE + M LDIN+EL+P K ++ + L +
Sbjct: 10 LFEEHFRIERLG-DNK--YDRVDRIYCKSEDKSITMTLDINNELFPCKPDEELHVALATS 66
Query: 268 LNPDGTPD--TGY----YVPGNRQSLADNFEYVMYGKLYKISE 378
L+ DG+ D G+ + +LAD F+YV YGK+YK +
Sbjct: 67 LHYDGSKDDERGWRDVAKAGASDATLADIFDYVCYGKIYKFED 109
[161][TOP]
>UniRef100_B9P588 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9P588_POPTR
Length = 56
Score = 56.6 bits (135), Expect = 1e-06
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Frame = +1
Query: 349 MYGKLYKI-SEGSG-REKAELNISFGGLLMMMKGDHSHCNKFELDQRLYLLMRKV 507
M+GKLYKI EGSG K E+ ISFGGLLM +KG+ F+LDQ+ +L MRK+
Sbjct: 1 MHGKLYKILDEGSGANHKVEMLISFGGLLMSLKGNPDCITDFQLDQKYFLCMRKL 55
[162][TOP]
>UniRef100_Q2HQ75 RNA polymerase I subunit RPB8 n=1 Tax=Trypanosoma brucei brucei
RepID=Q2HQ75_TRYBB
Length = 149
Score = 56.6 bits (135), Expect = 1e-06
Identities = 30/143 (20%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Frame = +1
Query: 82 EILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLV 261
+++ +D F V +N ++ ++ +V+R+ E + + D+N+ +PL G + ++L
Sbjct: 5 KVILEDTFTVAAVN-EEGTVYSRVSRVRCTGEGGGLIITSDVNTGEFPLHSGDRLTIILT 63
Query: 262 PTLNPDGTPDTGYYVPG--NRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMM 435
++ + +Y +R + D+ +Y M+G++Y + ++IS GGLL
Sbjct: 64 DSIELSEQAGSKHYDQSVYHRSTRLDDCDYAMHGRVYSMEVNGSSLDVTVHISCGGLLTQ 123
Query: 436 MKGDHSHCNKFELDQRLYLLMRK 504
+ G + +Y+LM++
Sbjct: 124 IVGKPQSLKDVHYNSDVYILMKR 146
[163][TOP]
>UniRef100_D0A7Y4 RNA polymerase B subunit RPB8, putative n=2 Tax=Trypanosoma brucei
RepID=D0A7Y4_TRYBG
Length = 149
Score = 56.6 bits (135), Expect = 1e-06
Identities = 30/143 (20%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Frame = +1
Query: 82 EILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLV 261
+++ +D F V +N ++ ++ +V+R+ E + + D+N+ +PL G + ++L
Sbjct: 5 KVILEDTFTVAAVN-EEGTVYSRVSRVRCTGEGGGLIITSDVNTGEFPLHSGDRLTIILT 63
Query: 262 PTLNPDGTPDTGYYVPG--NRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMM 435
++ + +Y +R + D+ +Y M+G++Y + ++IS GGLL
Sbjct: 64 DSIELSEQAGSKHYDQSVYHRSTRLDDCDYAMHGRVYSMEVNESSLDVTVHISCGGLLTQ 123
Query: 436 MKGDHSHCNKFELDQRLYLLMRK 504
+ G + +Y+LM++
Sbjct: 124 IVGKPQSLKDVHYNSDVYILMKR 146
[164][TOP]
>UniRef100_A4I3F6 RNA polymerase B subunit RPB8, putative n=2 Tax=Leishmania
RepID=A4I3F6_LEIIN
Length = 149
Score = 55.1 bits (131), Expect = 4e-06
Identities = 33/143 (23%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
++ +D F V +N + ++ +V+RI ++ + + DINSE +P+ + ++L
Sbjct: 6 VILEDTFTVNGVNTEGT-VYLRVSRIRCVNQDGSLTITTDINSEEFPVSTNDRLTIVLAN 64
Query: 265 TLNPDGTPDTGYYVPG--NRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMMM 438
+L G + YY +R++ ++ +Y M+G++Y + ++IS GGLL+ +
Sbjct: 65 SLELGGKTGSKYYDHSVYHRETRLNDCDYAMHGRVYGHEVVENGLEVNVHISCGGLLVNI 124
Query: 439 KGDHSHCNKFELDQRLYLLMRKV 507
G + +Y+L+++V
Sbjct: 125 VGKPQGLRDVHYNSDVYILIKRV 147
[165][TOP]
>UniRef100_UPI00006CB425 RNA polymerase Rpb8 family protein n=1 Tax=Tetrahymena thermophila
RepID=UPI00006CB425
Length = 130
Score = 54.7 bits (130), Expect = 5e-06
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 1/148 (0%)
Frame = +1
Query: 67 DVTMVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKF 246
D T IL DD F + + K + + R+ +E + +DIN +L+P++ +K+
Sbjct: 3 DFTSDAILVDDTFIASNIIKEPK--YVRTWRVILNNETLSI--EIDINFDLFPMEQDKKY 58
Query: 247 ALLLVPTLNPDGTPDTGYYVPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGL 426
++L + P+ +F Y MYGK++KI + ++ + IS+GGL
Sbjct: 59 QVILTQSFLPE---------------YKKSFSYAMYGKIFKIDLEQDQYQS-IYISYGGL 102
Query: 427 LMMMKGD-HSHCNKFELDQRLYLLMRKV 507
+M M+G + + + R Y+L+R++
Sbjct: 103 VMKMRGKLNDMSQSIKNETRCYILLRQI 130
[166][TOP]
>UniRef100_C5L3C2 RNA polymerase II B8 subunit, putative (Fragment) n=1 Tax=Perkinsus
marinus ATCC 50983 RepID=C5L3C2_9ALVE
Length = 87
Score = 54.3 bits (129), Expect = 7e-06
Identities = 29/91 (31%), Positives = 54/91 (59%)
Frame = +1
Query: 88 LFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVPT 267
+F+D+F V+ N DD+K F++V+RI+A+S ++ + +DIN+E+YP+ + +
Sbjct: 4 IFEDMFDVK--NIDDEK-FDRVSRIKAQSHTYNAEIEVDINTEIYPIGSSDTLRIAIASA 60
Query: 268 LNPDGTPDTGYYVPGNRQSLADNFEYVMYGK 360
+ + GY + + D++EY MYGK
Sbjct: 61 AD----ANEGYQGEAAQPGIIDDYEYAMYGK 87
[167][TOP]
>UniRef100_A4HGC3 RNA polymerase B subunit RPB8, putative n=1 Tax=Leishmania
braziliensis RepID=A4HGC3_LEIBR
Length = 149
Score = 53.9 bits (128), Expect = 9e-06
Identities = 33/143 (23%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Frame = +1
Query: 85 ILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALLLVP 264
++ +D F V +N + ++ +V+RI ++ + + DINSE +P+ + ++L
Sbjct: 6 VILEDTFTVNGVNTEGT-VYLRVSRIRCVNQDGSLTITSDINSEEFPVATNDRLTIVLAN 64
Query: 265 TLNPDGTPDTGYYVPG--NRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMMM 438
+L G + YY +R++ ++ +Y M+G++Y + ++IS GGLL+ +
Sbjct: 65 SLELGGKTGSKYYDHSVYHRETRLNDCDYAMHGRVYGHEVVENGLEVNVHISCGGLLVNI 124
Query: 439 KGDHSHCNKFELDQRLYLLMRKV 507
G + +Y+L+++V
Sbjct: 125 IGKPQGLRDVHYNSDVYILIKRV 147