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[1][TOP]
>UniRef100_C6TJ02 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TJ02_SOYBN
Length = 190
Score = 112 bits (280), Expect(2) = 3e-28
Identities = 56/56 (100%), Positives = 56/56 (100%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ
Sbjct: 1 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 56
Score = 37.0 bits (84), Expect(2) = 3e-28
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 464 NRSQQMSDQALVRCEYSMAN 523
NR+QQ+S ALVRCEYSMAN
Sbjct: 57 NRNQQISSHALVRCEYSMAN 76
[2][TOP]
>UniRef100_B9SWZ0 Exosome complex exonuclease RRP41, putative n=1 Tax=Ricinus
communis RepID=B9SWZ0_RICCO
Length = 241
Score = 110 bits (274), Expect(2) = 3e-28
Identities = 53/56 (94%), Positives = 56/56 (100%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
MEYVSPEGLRLDGRRPMEMRQ+RA+IGAVSKADGSA+FEMGNTKVIAAVYGPREVQ
Sbjct: 1 MEYVSPEGLRLDGRRPMEMRQLRAQIGAVSKADGSAVFEMGNTKVIAAVYGPREVQ 56
Score = 38.9 bits (89), Expect(2) = 3e-28
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +2
Query: 464 NRSQQMSDQALVRCEYSMAN 523
NRSQQ+ DQALVRCEY+MAN
Sbjct: 57 NRSQQIIDQALVRCEYTMAN 76
[3][TOP]
>UniRef100_B9I8T9 Predicted protein n=2 Tax=Populus RepID=B9I8T9_POPTR
Length = 241
Score = 106 bits (264), Expect(2) = 9e-28
Identities = 50/56 (89%), Positives = 56/56 (100%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
ME+V+PEGLRLDGRRPMEMRQ+RA+IGAV+KADGSA+FEMGNTKVIAAVYGPREVQ
Sbjct: 1 MEFVNPEGLRLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQ 56
Score = 41.2 bits (95), Expect(2) = 9e-28
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 464 NRSQQMSDQALVRCEYSMAN 523
NRSQQ++DQALVRCEYSMAN
Sbjct: 57 NRSQQINDQALVRCEYSMAN 76
[4][TOP]
>UniRef100_A5BIU1 Chromosome chr15 scaffold_40, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A5BIU1_VITVI
Length = 241
Score = 105 bits (262), Expect(2) = 2e-27
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
ME+VSPEGLRLDGRRPMEMRQIR EIGAV+KADGSA FEMGNTKVIAAVYGPREV+
Sbjct: 1 MEFVSPEGLRLDGRRPMEMRQIRGEIGAVAKADGSAFFEMGNTKVIAAVYGPREVE 56
Score = 41.2 bits (95), Expect(2) = 2e-27
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 464 NRSQQMSDQALVRCEYSMAN 523
NRSQQ+SDQALVRCEY+MAN
Sbjct: 57 NRSQQISDQALVRCEYTMAN 76
[5][TOP]
>UniRef100_Q9SP08 Exonuclease RRP41 n=1 Tax=Arabidopsis thaliana RepID=Q9SP08_ARATH
Length = 241
Score = 98.6 bits (244), Expect(2) = 4e-21
Identities = 48/56 (85%), Positives = 52/56 (92%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
MEYV+PEGLRLDGRR EMRQI AE+G VSKADGSA+FEMGNTKVIAAVYGPRE+Q
Sbjct: 1 MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQ 56
Score = 26.6 bits (57), Expect(2) = 4e-21
Identities = 13/20 (65%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Frame = +2
Query: 464 NRSQQM-SDQALVRCEYSMA 520
N+SQQ +D A+V CEYSMA
Sbjct: 57 NKSQQKKNDHAVVLCEYSMA 76
[6][TOP]
>UniRef100_C5YZ99 Putative uncharacterized protein Sb09g022550 n=1 Tax=Sorghum
bicolor RepID=C5YZ99_SORBI
Length = 242
Score = 89.4 bits (220), Expect(2) = 1e-18
Identities = 42/57 (73%), Positives = 51/57 (89%), Gaps = 1/57 (1%)
Frame = +3
Query: 297 MEYVSP-EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
MEYV+P G R+DGRRP EMRQ++ E+G V++ADGSA+FEMGNT+VIAAVYGPREVQ
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQ 57
Score = 27.7 bits (60), Expect(2) = 1e-18
Identities = 13/20 (65%), Positives = 17/20 (85%), Gaps = 1/20 (5%)
Frame = +2
Query: 464 NRSQQM-SDQALVRCEYSMA 520
N+ QQ+ S++ALVRCEY MA
Sbjct: 58 NKGQQVNSNEALVRCEYRMA 77
[7][TOP]
>UniRef100_C5YVG7 Putative uncharacterized protein Sb09g028170 n=1 Tax=Sorghum
bicolor RepID=C5YVG7_SORBI
Length = 242
Score = 89.0 bits (219), Expect(2) = 1e-18
Identities = 42/57 (73%), Positives = 51/57 (89%), Gaps = 1/57 (1%)
Frame = +3
Query: 297 MEYVSP-EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
MEYV+P G R+DGRRP EMRQ++ E+G V++ADGSA+FEMGNT+VIAAVYGPREVQ
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGIVARADGSALFEMGNTRVIAAVYGPREVQ 57
Score = 27.7 bits (60), Expect(2) = 1e-18
Identities = 13/20 (65%), Positives = 17/20 (85%), Gaps = 1/20 (5%)
Frame = +2
Query: 464 NRSQQM-SDQALVRCEYSMA 520
N+ QQ+ S++ALVRCEY MA
Sbjct: 58 NKGQQVNSNEALVRCEYRMA 77
[8][TOP]
>UniRef100_B4FDA8 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FDA8_MAIZE
Length = 242
Score = 89.4 bits (220), Expect(2) = 2e-18
Identities = 42/57 (73%), Positives = 51/57 (89%), Gaps = 1/57 (1%)
Frame = +3
Query: 297 MEYVSP-EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
MEYV+P G R+DGRRP EMRQ++ E+G V++ADGSA+FEMGNT+VIAAVYGPREVQ
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQ 57
Score = 26.9 bits (58), Expect(2) = 2e-18
Identities = 13/20 (65%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Frame = +2
Query: 464 NRSQQM-SDQALVRCEYSMA 520
N+ QQ+ S +ALVRCEY MA
Sbjct: 58 NKGQQVNSKEALVRCEYRMA 77
[9][TOP]
>UniRef100_B9G2C8 Putative uncharacterized protein n=2 Tax=Oryza sativa
RepID=B9G2C8_ORYSJ
Length = 242
Score = 89.4 bits (220), Expect(2) = 2e-18
Identities = 42/57 (73%), Positives = 51/57 (89%), Gaps = 1/57 (1%)
Frame = +3
Query: 297 MEYVSP-EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
MEYV+P G R+DGRRP EMRQ++ E+G V++ADGSA+FEMGNT+VIAAVYGPREVQ
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQ 57
Score = 26.6 bits (57), Expect(2) = 2e-18
Identities = 13/21 (61%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = +2
Query: 464 NRSQQM-SDQALVRCEYSMAN 523
N+ QQ+ S ALVRCEY MA+
Sbjct: 58 NKGQQVNSKDALVRCEYRMAD 78
[10][TOP]
>UniRef100_A9TY02 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9TY02_PHYPA
Length = 246
Score = 82.8 bits (203), Expect(2) = 3e-18
Identities = 39/60 (65%), Positives = 47/60 (78%)
Frame = +3
Query: 300 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQIGANK 479
E+VSPEGLRLDGRRP EMR + A +G V ADGSA+F MGNT+V+A VYGP EV A++
Sbjct: 4 EFVSPEGLRLDGRRPPEMRHLHAVVGVVPSADGSALFHMGNTQVMAVVYGPHEVHNKAHQ 63
Score = 32.7 bits (73), Expect(2) = 3e-18
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +2
Query: 464 NRSQQMSDQALVRCEYSMA 520
N++ Q+ D+ALVRCEYSMA
Sbjct: 59 NKAHQLHDKALVRCEYSMA 77
[11][TOP]
>UniRef100_B6T763 Exosome complex exonuclease RRP41 n=1 Tax=Zea mays
RepID=B6T763_MAIZE
Length = 242
Score = 88.2 bits (217), Expect(2) = 4e-18
Identities = 42/57 (73%), Positives = 50/57 (87%), Gaps = 1/57 (1%)
Frame = +3
Query: 297 MEYVSP-EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
MEYV+P G R+DGRRP EMRQ++ E+G V +ADGSA+FEMGNT+VIAAVYGPREVQ
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVVRADGSALFEMGNTRVIAAVYGPREVQ 57
Score = 26.9 bits (58), Expect(2) = 4e-18
Identities = 13/20 (65%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Frame = +2
Query: 464 NRSQQM-SDQALVRCEYSMA 520
N+ QQ+ S +ALVRCEY MA
Sbjct: 58 NKGQQVNSKEALVRCEYRMA 77
[12][TOP]
>UniRef100_A8J275 3'-5' exoribonuclease PH component of the exosome n=1
Tax=Chlamydomonas reinhardtii RepID=A8J275_CHLRE
Length = 245
Score = 84.7 bits (208), Expect(2) = 7e-17
Identities = 39/55 (70%), Positives = 47/55 (85%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
ME+VSPEGLRLDGRRP E+R+I ++ +S ADGSAIFEMGNTKV+AAV+GP V
Sbjct: 1 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV 55
Score = 26.2 bits (56), Expect(2) = 7e-17
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 461 TNRSQQMSDQALVRCEYSMA 520
T RS+ + ALV CEYSMA
Sbjct: 56 TRRSELREEGALVVCEYSMA 75
[13][TOP]
>UniRef100_Q6K293 Putative exosome component 4 n=1 Tax=Oryza sativa Japonica Group
RepID=Q6K293_ORYSJ
Length = 245
Score = 87.4 bits (215), Expect = 5e-16
Identities = 41/56 (73%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Frame = +3
Query: 297 MEYVSP-EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
MEYV+P G R+DGRRP EMRQ++ E+G V++ADGSA+FEMGNT+VIAAVYGPREV
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREV 56
[14][TOP]
>UniRef100_Q54EU6 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum
RepID=Q54EU6_DICDI
Length = 247
Score = 84.0 bits (206), Expect = 6e-15
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQI 467
K+ Y+SPEGLR+DGRR E+R+I E+G +ADGSA +E GNTK+IAAVYGPRE+ +
Sbjct: 3 KLSYISPEGLRIDGRRANELRRINVEMGIFKRADGSAYYEQGNTKIIAAVYGPREISV 60
[15][TOP]
>UniRef100_C1EDA5 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EDA5_9CHLO
Length = 261
Score = 79.3 bits (194), Expect(2) = 1e-14
Identities = 37/54 (68%), Positives = 46/54 (85%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
MEYVS EGLRLDGRRP E R++R E+ A+ +DGSA+FE+GNTKV+AAV+GP E
Sbjct: 1 MEYVSLEGLRLDGRRPKETRRMRCELTALPGSDGSAVFELGNTKVLAAVHGPHE 54
Score = 24.3 bits (51), Expect(2) = 1e-14
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 470 SQQMSDQALVRCEYSMA 520
S+++ D+ LV+CE SMA
Sbjct: 59 SERLEDRLLVKCEVSMA 75
[16][TOP]
>UniRef100_C1MWG2 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MWG2_9CHLO
Length = 245
Score = 74.7 bits (182), Expect(2) = 1e-13
Identities = 36/54 (66%), Positives = 42/54 (77%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
MEYVS EGLRLDGRRP E RQ+R +G + ADGSA F GNT+V+ AV+GPRE
Sbjct: 1 MEYVSLEGLRLDGRRPKETRQMRCAMGVLPAADGSAEFRAGNTRVMCAVHGPRE 54
Score = 25.0 bits (53), Expect(2) = 1e-13
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 434 CCCLWP*RGTNRSQQMSDQALVRCEYSMA 520
C P NR ++ ++A+++CE+S A
Sbjct: 47 CAVHGPRECVNRGERDDERAIIKCEFSQA 75
[17][TOP]
>UniRef100_UPI0001923A5C PREDICTED: similar to putative exosome complex exonuclease RRP41
n=1 Tax=Hydra magnipapillata RepID=UPI0001923A5C
Length = 244
Score = 72.0 bits (175), Expect(2) = 3e-13
Identities = 35/55 (63%), Positives = 43/55 (78%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
++ VSPEGLR DGR+ E+R+I A+ G S+ADGSA E GNTKVIA+VYGP EV
Sbjct: 4 LDLVSPEGLRFDGRKCHELRKITAKKGIFSQADGSAYIEQGNTKVIASVYGPHEV 58
Score = 26.6 bits (57), Expect(2) = 3e-13
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 461 TNRSQQMSDQALVRCEYSMA 520
+NRS+ + D L+ C++SMA
Sbjct: 59 SNRSKTLHDSTLINCQFSMA 78
[18][TOP]
>UniRef100_Q975G8 Probable exosome complex exonuclease 1 n=1 Tax=Sulfolobus tokodaii
RepID=ECX1_SULTO
Length = 247
Score = 78.2 bits (191), Expect = 3e-13
Identities = 37/56 (66%), Positives = 44/56 (78%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
K + GLRLDGR+P EMR I+ E+G + ADGSAIFEMGNTKVIAAVYGP+E+
Sbjct: 10 KPRLILDNGLRLDGRKPDEMRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGPKEM 65
[19][TOP]
>UniRef100_C4WSG4 ACYPI001085 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSG4_ACYPI
Length = 213
Score = 68.9 bits (167), Expect(2) = 9e-13
Identities = 31/61 (50%), Positives = 44/61 (72%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQIGAN 476
M+ +S +GLR DGRR E+R+IR ++G ++ DGSA E GNTKV+AA+YGP E++
Sbjct: 1 MDLLSRQGLRTDGRRSGELRRIRCKMGVFNQPDGSAYLEQGNTKVVAAIYGPHEIRTNRA 60
Query: 477 K 479
K
Sbjct: 61 K 61
Score = 28.1 bits (61), Expect(2) = 9e-13
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 461 TNRSQQMSDQALVRCEYSMA 520
TNR++ +D A++ C+YSMA
Sbjct: 57 TNRAKAPNDSAVINCQYSMA 76
[20][TOP]
>UniRef100_UPI000179264C PREDICTED: similar to exosome complex exonuclease RRP41, partial
n=1 Tax=Acyrthosiphon pisum RepID=UPI000179264C
Length = 122
Score = 68.9 bits (167), Expect(2) = 9e-13
Identities = 31/61 (50%), Positives = 44/61 (72%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQIGAN 476
M+ +S +GLR DGRR E+R+IR ++G ++ DGSA E GNTKV+AA+YGP E++
Sbjct: 1 MDLLSRQGLRTDGRRSGELRRIRCKMGVFNQPDGSAYLEQGNTKVVAAIYGPHEIRTNRA 60
Query: 477 K 479
K
Sbjct: 61 K 61
Score = 28.1 bits (61), Expect(2) = 9e-13
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 461 TNRSQQMSDQALVRCEYSMA 520
TNR++ +D A++ C+YSMA
Sbjct: 57 TNRAKAPNDSAVINCQYSMA 76
[21][TOP]
>UniRef100_A7S1D9 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7S1D9_NEMVE
Length = 247
Score = 75.5 bits (184), Expect = 2e-12
Identities = 37/76 (48%), Positives = 55/76 (72%), Gaps = 4/76 (5%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQIGA- 473
+E +SPEGLR+DGR+ E+R++ ++G +S+ADGSA EMGNTK +A VYGP EVQ A
Sbjct: 4 LEVLSPEGLRIDGRKASELRKMVCKVGVLSQADGSAYIEMGNTKALATVYGPHEVQNKAK 63
Query: 474 ---NK*VTRLWFGVST 512
++ + + FG++T
Sbjct: 64 ALHDRVLLNVQFGMAT 79
[22][TOP]
>UniRef100_Q4SLK0 Chromosome 15 SCAF14556, whole genome shotgun sequence n=1
Tax=Tetraodon nigroviridis RepID=Q4SLK0_TETNG
Length = 291
Score = 66.2 bits (160), Expect(2) = 2e-12
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
+E +S +G R+DGR+ E+R+I+A +G ++ADGSA E GNTK +A VYGP EV
Sbjct: 4 LELLSDQGYRIDGRKATELRKIQARMGVFAQADGSAYLEQGNTKALAVVYGPHEV 58
Score = 29.3 bits (64), Expect(2) = 2e-12
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 434 CCCLWP*RGTNRSQQMSDQALVRCEYSMA 520
C C+ RG+ RS+ D+A++ C+YSMA
Sbjct: 67 CVCVCQMRGS-RSRARHDRAVINCQYSMA 94
[23][TOP]
>UniRef100_B7P8R1 Exosomal 3'-5' exoribonuclease complex, subunit Rrp41, putative n=1
Tax=Ixodes scapularis RepID=B7P8R1_IXOSC
Length = 246
Score = 68.6 bits (166), Expect(2) = 2e-12
Identities = 32/54 (59%), Positives = 39/54 (72%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
+E +S EG RLDGR+P E R+I +G S+ADGSA E GN KV+AAVYGP E
Sbjct: 4 LELLSDEGYRLDGRKPNEQRKIDCRLGVFSQADGSAYIEQGNAKVLAAVYGPHE 57
Score = 26.9 bits (58), Expect(2) = 2e-12
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 464 NRSQQMSDQALVRCEYSMA 520
NRS+ + D+ LV C++SMA
Sbjct: 61 NRSRALHDRVLVNCQFSMA 79
[24][TOP]
>UniRef100_C1BWS7 Exosome complex exonuclease RRP41 n=1 Tax=Esox lucius
RepID=C1BWS7_ESOLU
Length = 245
Score = 68.9 bits (167), Expect(2) = 2e-12
Identities = 30/61 (49%), Positives = 45/61 (73%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQIGAN 476
+E +S +G RLDGR+ E+R+++A +G ++ADGSA E GNTK +A VYGP EV++ +
Sbjct: 4 VELLSDQGYRLDGRKATELRKVQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVRMSRS 63
Query: 477 K 479
K
Sbjct: 64 K 64
Score = 26.6 bits (57), Expect(2) = 2e-12
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +2
Query: 464 NRSQQMSDQALVRCEYSMA 520
+RS+ + D+A++ C+YSMA
Sbjct: 61 SRSKTLHDRAVINCQYSMA 79
[25][TOP]
>UniRef100_B5X813 Exosome complex exonuclease RRP41 n=1 Tax=Salmo salar
RepID=B5X813_SALSA
Length = 245
Score = 67.4 bits (163), Expect(2) = 7e-12
Identities = 30/61 (49%), Positives = 44/61 (72%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQIGAN 476
+E +S +G RLDGR+ E+R+++A +G ++ADGSA E GNTK +A VYGP EV+ +
Sbjct: 4 LELLSDQGYRLDGRKAAELRKVQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVRGSRS 63
Query: 477 K 479
K
Sbjct: 64 K 64
Score = 26.6 bits (57), Expect(2) = 7e-12
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +2
Query: 464 NRSQQMSDQALVRCEYSMA 520
+RS+ + D+A++ C+YSMA
Sbjct: 61 SRSKTLHDRAVINCQYSMA 79
[26][TOP]
>UniRef100_UPI000186CE6C Exosome complex exonuclease RRP41, putative n=1 Tax=Pediculus
humanus corporis RepID=UPI000186CE6C
Length = 253
Score = 72.0 bits (175), Expect(2) = 9e-12
Identities = 33/53 (62%), Positives = 42/53 (79%)
Frame = +3
Query: 306 VSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
+S + LRLDGRR E+RQIR ++G S+ DGSA EMGNTKV+AAVYGP +V+
Sbjct: 5 ISDQNLRLDGRRASELRQIRCKLGVFSQPDGSAYIEMGNTKVLAAVYGPHQVR 57
Score = 21.6 bits (44), Expect(2) = 9e-12
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 467 RSQQMSDQALVRCEYSMA 520
R++ + D A++ C+YS A
Sbjct: 59 RTKPLLDAAVINCQYSSA 76
[27][TOP]
>UniRef100_Q5PQ94 LOC495942 protein n=1 Tax=Xenopus laevis RepID=Q5PQ94_XENLA
Length = 249
Score = 68.2 bits (165), Expect(2) = 9e-12
Identities = 31/61 (50%), Positives = 44/61 (72%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQIGAN 476
ME +S +G R+DGR+ E+R+IRA +G ++ADGSA E GNTK +A VYGP E++ +
Sbjct: 4 MELLSDQGYRVDGRKAGELRKIRARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRS 63
Query: 477 K 479
K
Sbjct: 64 K 64
Score = 25.4 bits (54), Expect(2) = 9e-12
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +2
Query: 464 NRSQQMSDQALVRCEYSMA 520
+RS+ + D+ ++ C+YSMA
Sbjct: 61 SRSKMLHDRCVINCQYSMA 79
[28][TOP]
>UniRef100_UPI00005EC0D3 PREDICTED: similar to Chain G, Structure Of The Human Rna Exosome
Composed Of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42,
Csl4, Rrp4, And Rrp40 n=1 Tax=Monodelphis domestica
RepID=UPI00005EC0D3
Length = 245
Score = 65.5 bits (158), Expect(2) = 9e-12
Identities = 29/56 (51%), Positives = 42/56 (75%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
+E +S +G R+DGRR E+R+I+A +G ++ADGSA E GNTK +A VYGP E++
Sbjct: 4 LELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEMR 59
Score = 28.1 bits (61), Expect(2) = 9e-12
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +2
Query: 464 NRSQQMSDQALVRCEYSMA 520
+RS+ + D+ALV C+YSMA
Sbjct: 61 SRSRALPDRALVNCQYSMA 79
[29][TOP]
>UniRef100_C1BN11 Exosome complex exonuclease RRP41 n=1 Tax=Caligus rogercresseyi
RepID=C1BN11_9MAXI
Length = 246
Score = 73.2 bits (178), Expect = 1e-11
Identities = 37/61 (60%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVS-KADGSAIFEMGNTKVIAAVYGPREVQIGA 473
ME +S +GLRLDGR+ E+R++R +GA S ADGSA EMGNTKV+AAVYGPRE + G+
Sbjct: 1 MELLSDQGLRLDGRKSDELRRLRCRLGAFSWSADGSAYLEMGNTKVLAAVYGPREPRGGS 60
Query: 474 N 476
+
Sbjct: 61 S 61
[30][TOP]
>UniRef100_Q28H58 Exosome component 4 n=1 Tax=Xenopus (Silurana) tropicalis
RepID=Q28H58_XENTR
Length = 249
Score = 67.0 bits (162), Expect(2) = 1e-11
Identities = 30/61 (49%), Positives = 44/61 (72%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQIGAN 476
+E +S +G R+DGR+ E+R+IRA +G ++ADGSA E GNTK +A VYGP E++ +
Sbjct: 4 LELLSDQGYRVDGRKAGELRKIRARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRS 63
Query: 477 K 479
K
Sbjct: 64 K 64
Score = 26.2 bits (56), Expect(2) = 1e-11
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +2
Query: 464 NRSQQMSDQALVRCEYSMA 520
+RS+ + D+++V C+YSMA
Sbjct: 61 SRSKMLHDRSVVNCQYSMA 79
[31][TOP]
>UniRef100_C3N5R3 Exosome complex exonuclease 1 n=1 Tax=Sulfolobus islandicus M.16.27
RepID=C3N5R3_SULIA
Length = 245
Score = 72.8 bits (177), Expect = 1e-11
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = +3
Query: 315 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
+G R+DGR+P E+R I+ E+G + ADGSAIFEMGNTK IAAVYGP+E+
Sbjct: 13 DGKRIDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEM 61
[32][TOP]
>UniRef100_C3MVG4 Exosome complex exonuclease 1 n=2 Tax=Sulfolobus islandicus
RepID=C3MVG4_SULIM
Length = 245
Score = 72.8 bits (177), Expect = 1e-11
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = +3
Query: 315 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
+G R+DGR+P E+R I+ E+G + ADGSAIFEMGNTK IAAVYGP+E+
Sbjct: 13 DGKRIDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEM 61
[33][TOP]
>UniRef100_C3MQ46 Exosome complex exonuclease 1 n=3 Tax=Sulfolobus islandicus
RepID=C3MQ46_SULIL
Length = 245
Score = 72.8 bits (177), Expect = 1e-11
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = +3
Query: 315 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
+G R+DGR+P E+R I+ E+G + ADGSAIFEMGNTK IAAVYGP+E+
Sbjct: 13 DGKRIDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEM 61
[34][TOP]
>UniRef100_B4KHM2 GI10716 n=1 Tax=Drosophila mojavensis RepID=B4KHM2_DROMO
Length = 249
Score = 72.4 bits (176), Expect = 2e-11
Identities = 32/57 (56%), Positives = 43/57 (75%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
+ME +S +GLRLDGRRP E+R I+ ++G + DGSA E GNTKV+AAVYGP + +
Sbjct: 4 RMELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAK 60
[35][TOP]
>UniRef100_B4JCT4 GH10637 n=1 Tax=Drosophila grimshawi RepID=B4JCT4_DROGR
Length = 249
Score = 72.4 bits (176), Expect = 2e-11
Identities = 32/57 (56%), Positives = 43/57 (75%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
+ME +S +GLRLDGRRP E+R I+ ++G + DGSA E GNTKV+AAVYGP + +
Sbjct: 4 RMELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAK 60
[36][TOP]
>UniRef100_UPI00003608A8 UPI00003608A8 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00003608A8
Length = 245
Score = 67.0 bits (162), Expect(2) = 2e-11
Identities = 29/56 (51%), Positives = 43/56 (76%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
+E +S +G R+DGR+ E+R+I+A +G ++ADGSA E GNTKV+A VYGP E++
Sbjct: 4 LELLSDQGYRIDGRKATELRKIQARMGVFAQADGSAYLEQGNTKVLAVVYGPHEMR 59
Score = 25.4 bits (54), Expect(2) = 2e-11
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 464 NRSQQMSDQALVRCEYSMA 520
+RS+ D+A++ C+YSMA
Sbjct: 61 SRSRARHDRAVINCQYSMA 79
[37][TOP]
>UniRef100_UPI00001CFD4D exosome component 4 n=1 Tax=Rattus norvegicus RepID=UPI00001CFD4D
Length = 245
Score = 66.6 bits (161), Expect(2) = 2e-11
Identities = 29/56 (51%), Positives = 42/56 (75%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
+E +S +G R+DGRR E+R+I+A +G ++ADGSA E GNTK +A VYGP E++
Sbjct: 4 LELLSDQGYRIDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIR 59
Score = 25.8 bits (55), Expect(2) = 2e-11
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 464 NRSQQMSDQALVRCEYSMA 520
+RS+ + D+ALV C+YS A
Sbjct: 61 SRSRALPDRALVNCQYSSA 79
[38][TOP]
>UniRef100_Q921I9 Exosome complex exonuclease RRP41 n=2 Tax=Mus musculus
RepID=EXOS4_MOUSE
Length = 245
Score = 66.6 bits (161), Expect(2) = 2e-11
Identities = 29/56 (51%), Positives = 42/56 (75%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
+E +S +G R+DGRR E+R+I+A +G ++ADGSA E GNTK +A VYGP E++
Sbjct: 4 LELLSDQGYRIDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIR 59
Score = 25.8 bits (55), Expect(2) = 2e-11
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 464 NRSQQMSDQALVRCEYSMA 520
+RS+ + D+ALV C+YS A
Sbjct: 61 SRSRALPDRALVNCQYSSA 79
[39][TOP]
>UniRef100_UPI0000EDBA5C PREDICTED: similar to Chain C, Structure Of The Human Rna Exosome
Composed Of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42,
Csl4, Rrp4, And Rrp40 n=1 Tax=Ornithorhynchus anatinus
RepID=UPI0000EDBA5C
Length = 245
Score = 66.2 bits (160), Expect(2) = 2e-11
Identities = 30/56 (53%), Positives = 41/56 (73%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
+E +S EG R+DGRR E+R+I A +G ++ADGSA E GNTK +A VYGP E++
Sbjct: 4 LELLSDEGYRVDGRRAGELRKIEARMGVFAQADGSAYIEQGNTKALAVVYGPHEMR 59
Score = 26.2 bits (56), Expect(2) = 2e-11
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +2
Query: 467 RSQQMSDQALVRCEYSMA 520
RS+ + D+ALV C++SMA
Sbjct: 62 RSRALPDRALVNCQFSMA 79
[40][TOP]
>UniRef100_Q6PBZ8 Exosc4 protein n=1 Tax=Danio rerio RepID=Q6PBZ8_DANRE
Length = 245
Score = 64.7 bits (156), Expect(2) = 3e-11
Identities = 28/61 (45%), Positives = 43/61 (70%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQIGAN 476
+E +S +G RLDGR+ E+R+++A + ++ADGSA E GNTK +A VYGP E++ +
Sbjct: 4 LELLSDQGYRLDGRKATELRKVQARMSVFAQADGSAYLEQGNTKALAVVYGPHEIRGSRS 63
Query: 477 K 479
K
Sbjct: 64 K 64
Score = 27.3 bits (59), Expect(2) = 3e-11
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +2
Query: 464 NRSQQMSDQALVRCEYSMA 520
+RS+ + D+A++ C+YSMA
Sbjct: 61 SRSKSLHDRAIINCQYSMA 79
[41][TOP]
>UniRef100_B4P324 GE11809 n=1 Tax=Drosophila yakuba RepID=B4P324_DROYA
Length = 246
Score = 71.6 bits (174), Expect = 3e-11
Identities = 32/57 (56%), Positives = 43/57 (75%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
K E +S +GLRLDGRRP E+R+I+ ++G + DGSA E GNTKV+AAVYGP + +
Sbjct: 4 KYELLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAK 60
[42][TOP]
>UniRef100_B3NB10 GG10219 n=1 Tax=Drosophila erecta RepID=B3NB10_DROER
Length = 246
Score = 71.6 bits (174), Expect = 3e-11
Identities = 32/57 (56%), Positives = 43/57 (75%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
K E +S +GLRLDGRRP E+R+I+ ++G + DGSA E GNTKV+AAVYGP + +
Sbjct: 4 KYELLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAK 60
[43][TOP]
>UniRef100_Q9UXC2 Probable exosome complex exonuclease 1 n=2 Tax=Sulfolobus
solfataricus RepID=ECX1_SULSO
Length = 248
Score = 71.6 bits (174), Expect = 3e-11
Identities = 32/49 (65%), Positives = 40/49 (81%)
Frame = +3
Query: 315 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
+G R DGR+P E+R I+ E+G + ADGSAIFEMGNTK IAAVYGP+E+
Sbjct: 16 DGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEM 64
[44][TOP]
>UniRef100_Q4JB27 Probable exosome complex exonuclease 1 n=1 Tax=Sulfolobus
acidocaldarius RepID=ECX1_SULAC
Length = 243
Score = 71.6 bits (174), Expect = 3e-11
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
K + + GLR DGR+ E+R I+ E+G + ADGSAIFEMGNTKVIAAVYGP+E+
Sbjct: 6 KPKLILENGLRTDGRKLDELRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGPKEM 61
[45][TOP]
>UniRef100_B4MX14 GK15569 n=1 Tax=Drosophila willistoni RepID=B4MX14_DROWI
Length = 251
Score = 71.2 bits (173), Expect = 4e-11
Identities = 34/60 (56%), Positives = 44/60 (73%)
Frame = +3
Query: 300 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQIGANK 479
E +S +GLRLDGRRP E+R I+ ++G + DGSA E GNTKV+AAVYGP + + G NK
Sbjct: 6 ELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAK-GKNK 64
[46][TOP]
>UniRef100_A4YCV2 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Metallosphaera
sedula DSM 5348 RepID=A4YCV2_METS5
Length = 245
Score = 71.2 bits (173), Expect = 4e-11
Identities = 32/56 (57%), Positives = 44/56 (78%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
K + + +G RLDGRRP E+R ++ EIG + ADGS++ E+GNTK+IAAVYGPRE+
Sbjct: 6 KPKLILDDGRRLDGRRPDELRPMKMEIGVLKNADGSSLVEVGNTKIIAAVYGPREM 61
[47][TOP]
>UniRef100_C3XU58 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3XU58_BRAFL
Length = 246
Score = 69.3 bits (168), Expect(2) = 4e-11
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQIGAN 476
+E +S +G R+DGRR E+R++ A +G ++ADGSA E GNTK +A VYGP EV+ G
Sbjct: 4 LEIISDQGYRIDGRRSSELRKVCARMGVFTQADGSAYIEQGNTKALATVYGPHEVRKGRG 63
Query: 477 K 479
K
Sbjct: 64 K 64
Score = 21.9 bits (45), Expect(2) = 4e-11
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 467 RSQQMSDQALVRCEYSMA 520
R + D+A+V C++SMA
Sbjct: 62 RGKIQHDRAVVNCQFSMA 79
[48][TOP]
>UniRef100_Q16KB4 Exosome complex exonuclease RRP41, putative n=1 Tax=Aedes aegypti
RepID=Q16KB4_AEDAE
Length = 245
Score = 70.9 bits (172), Expect(2) = 4e-11
Identities = 33/54 (61%), Positives = 42/54 (77%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
ME +S EGLRLDGRR E+R+I+ ++G S+ DGSA E GNTKV+AAVYGP +
Sbjct: 1 MELLSDEGLRLDGRRANELRRIQCKLGVFSQPDGSAYIEQGNTKVLAAVYGPHQ 54
Score = 20.4 bits (41), Expect(2) = 4e-11
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +2
Query: 485 DQALVRCEYSMA 520
++ +V C+YSMA
Sbjct: 63 EEVIVNCQYSMA 74
[49][TOP]
>UniRef100_UPI0001862F93 hypothetical protein BRAFLDRAFT_218985 n=1 Tax=Branchiostoma
floridae RepID=UPI0001862F93
Length = 244
Score = 69.3 bits (168), Expect(2) = 4e-11
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQIGAN 476
+E +S +G R+DGRR E+R++ A +G ++ADGSA E GNTK +A VYGP EV+ G
Sbjct: 4 LEIISDQGYRIDGRRSSELRKVCARMGVFTQADGSAYIEQGNTKALATVYGPHEVRKGRG 63
Query: 477 K 479
K
Sbjct: 64 K 64
Score = 21.9 bits (45), Expect(2) = 4e-11
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 467 RSQQMSDQALVRCEYSMA 520
R + D+A+V C++SMA
Sbjct: 62 RGKIQHDRAVVNCQFSMA 79
[50][TOP]
>UniRef100_B4M9A1 GJ18275 n=1 Tax=Drosophila virilis RepID=B4M9A1_DROVI
Length = 249
Score = 70.9 bits (172), Expect = 5e-11
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
++E +S +GLRLDGRRP E+R I+ ++G + DGSA E GNTKV+AAVYGP + +
Sbjct: 4 RIELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAK 60
[51][TOP]
>UniRef100_B3RL48 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3RL48_TRIAD
Length = 243
Score = 70.9 bits (172), Expect = 5e-11
Identities = 30/54 (55%), Positives = 41/54 (75%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
ME +SPEGLR+DGRRP E+R+ +G +S+ADGSA E GNTK +A++ GP +
Sbjct: 1 MEIISPEGLRIDGRRPEEIRRFNCRLGVLSRADGSAYLEQGNTKALASINGPHQ 54
[52][TOP]
>UniRef100_UPI00017968DC PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal
RNA-processing protein 41) (Exosome component 4) (p12A)
n=1 Tax=Equus caballus RepID=UPI00017968DC
Length = 245
Score = 66.2 bits (160), Expect(2) = 6e-11
Identities = 29/56 (51%), Positives = 42/56 (75%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
+E +S +G R+DGRR E+R+I+A +G ++ADGSA E GNTK +A VYGP E++
Sbjct: 4 LELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIR 59
Score = 24.6 bits (52), Expect(2) = 6e-11
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 464 NRSQQMSDQALVRCEYSMA 520
+R++ + D+ALV C+YS A
Sbjct: 61 SRARALPDRALVNCQYSSA 79
[53][TOP]
>UniRef100_UPI00004A57C5 PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal
RNA processing protein 41) (Exosome component 4) (p12A)
isoform 1 n=1 Tax=Canis lupus familiaris
RepID=UPI00004A57C5
Length = 245
Score = 66.2 bits (160), Expect(2) = 6e-11
Identities = 29/56 (51%), Positives = 42/56 (75%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
+E +S +G R+DGRR E+R+I+A +G ++ADGSA E GNTK +A VYGP E++
Sbjct: 4 LELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIR 59
Score = 24.6 bits (52), Expect(2) = 6e-11
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 464 NRSQQMSDQALVRCEYSMA 520
+R++ + D+ALV C+YS A
Sbjct: 61 SRARALPDRALVNCQYSSA 79
[54][TOP]
>UniRef100_Q9NPD3 Exosome complex exonuclease RRP41 n=1 Tax=Homo sapiens
RepID=EXOS4_HUMAN
Length = 245
Score = 66.2 bits (160), Expect(2) = 6e-11
Identities = 29/56 (51%), Positives = 42/56 (75%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
+E +S +G R+DGRR E+R+I+A +G ++ADGSA E GNTK +A VYGP E++
Sbjct: 4 LELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIR 59
Score = 24.6 bits (52), Expect(2) = 6e-11
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 464 NRSQQMSDQALVRCEYSMA 520
+R++ + D+ALV C+YS A
Sbjct: 61 SRARALPDRALVNCQYSSA 79
[55][TOP]
>UniRef100_Q7YRA3 Exosome complex exonuclease RRP41 n=1 Tax=Bos taurus
RepID=EXOS4_BOVIN
Length = 245
Score = 66.2 bits (160), Expect(2) = 6e-11
Identities = 29/56 (51%), Positives = 42/56 (75%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
+E +S +G R+DGRR E+R+I+A +G ++ADGSA E GNTK +A VYGP E++
Sbjct: 4 LELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIR 59
Score = 24.6 bits (52), Expect(2) = 6e-11
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 464 NRSQQMSDQALVRCEYSMA 520
+R++ + D+ALV C+YS A
Sbjct: 61 SRARALPDRALVNCQYSSA 79
[56][TOP]
>UniRef100_UPI00017B08EC UPI00017B08EC related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B08EC
Length = 245
Score = 65.5 bits (158), Expect(2) = 6e-11
Identities = 28/56 (50%), Positives = 42/56 (75%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
+E +S +G R+DGR+ E+R+I+A +G ++ADGSA E GNTK +A VYGP E++
Sbjct: 4 LELLSDQGYRIDGRKATELRKIQARMGVFAQADGSAYLEQGNTKALAVVYGPHEMR 59
Score = 25.4 bits (54), Expect(2) = 6e-11
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 464 NRSQQMSDQALVRCEYSMA 520
+RS+ D+A++ C+YSMA
Sbjct: 61 SRSRARHDRAVINCQYSMA 79
[57][TOP]
>UniRef100_A3DMU9 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Staphylothermus
marinus F1 RepID=A3DMU9_STAMF
Length = 240
Score = 67.4 bits (163), Expect(2) = 6e-11
Identities = 31/52 (59%), Positives = 39/52 (75%)
Frame = +3
Query: 306 VSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
+ +GLR DGR+P E+R I+ ++G + ADGSA E G TKVIAAVYGPREV
Sbjct: 7 IREDGLRHDGRKPNELRPIKMDVGVLKNADGSAYVEYGGTKVIAAVYGPREV 58
Score = 23.5 bits (49), Expect(2) = 6e-11
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 467 RSQQMSDQALVRCEYSMA 520
R + D+AL+RC Y MA
Sbjct: 61 RHLALPDRALIRCRYHMA 78
[58][TOP]
>UniRef100_UPI00006A4B1C PREDICTED: similar to LOC495942 protein n=1 Tax=Ciona intestinalis
RepID=UPI00006A4B1C
Length = 247
Score = 70.5 bits (171), Expect = 7e-11
Identities = 30/53 (56%), Positives = 40/53 (75%)
Frame = +3
Query: 300 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
E +S EG R DGR+P E+R++R +G ++ADGSA E GNTKV+AA+YGP E
Sbjct: 5 ELISDEGYRFDGRKPSELRRVRCNMGVFTQADGSAYIEQGNTKVLAAIYGPHE 57
[59][TOP]
>UniRef100_Q9VK19 FI07225p n=1 Tax=Drosophila melanogaster RepID=Q9VK19_DROME
Length = 246
Score = 70.5 bits (171), Expect = 7e-11
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
K + +S +GLRLDGRRP E+R+I+ ++G + DGSA E GNTKV+AAVYGP + +
Sbjct: 4 KYDLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAK 60
[60][TOP]
>UniRef100_Q8SYC8 RE67757p n=1 Tax=Drosophila melanogaster RepID=Q8SYC8_DROME
Length = 246
Score = 70.5 bits (171), Expect = 7e-11
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
K + +S +GLRLDGRRP E+R+I+ ++G + DGSA E GNTKV+AAVYGP + +
Sbjct: 4 KYDLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAK 60
[61][TOP]
>UniRef100_B4IEH2 GM25757 n=1 Tax=Drosophila sechellia RepID=B4IEH2_DROSE
Length = 246
Score = 70.5 bits (171), Expect = 7e-11
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
K + +S +GLRLDGRRP E+R+I+ ++G + DGSA E GNTKV+AAVYGP + +
Sbjct: 4 KYDLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAK 60
[62][TOP]
>UniRef100_B0XII7 Exosome complex exonuclease RRP41 n=1 Tax=Culex quinquefasciatus
RepID=B0XII7_CULQU
Length = 245
Score = 70.5 bits (171), Expect = 7e-11
Identities = 33/54 (61%), Positives = 42/54 (77%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
ME +S EGLRLDGRR E+R+I+ ++G S+ DGSA E GNTKV+AAVYGP +
Sbjct: 1 MELLSDEGLRLDGRRSNELRRIQCKLGVFSQPDGSAYVEQGNTKVLAAVYGPHQ 54
[63][TOP]
>UniRef100_Q29KH8 GA13761 n=2 Tax=pseudoobscura subgroup RepID=Q29KH8_DROPS
Length = 249
Score = 69.7 bits (169), Expect = 1e-10
Identities = 31/55 (56%), Positives = 41/55 (74%)
Frame = +3
Query: 300 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
E +S +GLRLDGRRP E+R I+ ++G + DGSA E GNTKV+AAVYGP + +
Sbjct: 6 ELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAK 60
[64][TOP]
>UniRef100_A8PTK4 Putative exosome complex exonuclease RRP41, putative n=1 Tax=Brugia
malayi RepID=A8PTK4_BRUMA
Length = 249
Score = 62.8 bits (151), Expect(2) = 1e-10
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
M +S G R DGR+P ++R + ++G S+ADGSA E GNTKV+ AVYGP E
Sbjct: 1 MSIISEHGFRQDGRKPHQIRNLNYKLGVYSQADGSAYLEQGNTKVLCAVYGPYE 54
Score = 26.9 bits (58), Expect(2) = 1e-10
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 434 CCCLWP*RGTNRSQQMSDQALVRCEYSMA 520
C P RS+ + D+ ++ C+YSMA
Sbjct: 47 CAVYGPYEPKQRSRLLEDRCIINCQYSMA 75
[65][TOP]
>UniRef100_B3MN36 GF15621 n=1 Tax=Drosophila ananassae RepID=B3MN36_DROAN
Length = 249
Score = 69.3 bits (168), Expect = 2e-10
Identities = 31/55 (56%), Positives = 41/55 (74%)
Frame = +3
Query: 300 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
E +S +GLRLDGRRP E+R I+ ++G + DGSA E GNTKV+AAVYGP + +
Sbjct: 6 ELLSEQGLRLDGRRPHELRHIQCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAK 60
[66][TOP]
>UniRef100_Q8TYC1 Probable exosome complex exonuclease 1 n=1 Tax=Methanopyrus
kandleri RepID=ECX1_METKA
Length = 239
Score = 68.2 bits (165), Expect = 3e-10
Identities = 29/52 (55%), Positives = 41/52 (78%)
Frame = +3
Query: 306 VSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
+S +GLRLDGR+P EMR ++ + G + +ADGSA E+G K++AAVYGPRE+
Sbjct: 9 ISEDGLRLDGRKPDEMRPLKIQAGVLKRADGSAYLELGANKIVAAVYGPREL 60
[67][TOP]
>UniRef100_A1RXQ6 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Thermofilum
pendens Hrk 5 RepID=A1RXQ6_THEPD
Length = 245
Score = 65.1 bits (157), Expect(2) = 5e-10
Identities = 30/51 (58%), Positives = 36/51 (70%)
Frame = +3
Query: 306 VSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
+ G R+DGR P EMR +R E G + ADGSA E+GN KV+AAVYGPRE
Sbjct: 10 IDENGRRVDGRLPDEMRPLRVEAGVLKNADGSAYVELGNNKVLAAVYGPRE 60
Score = 22.7 bits (47), Expect(2) = 5e-10
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +2
Query: 467 RSQQMSDQALVRCEYSM 517
R + + D+A+++C YSM
Sbjct: 64 RHEALPDRAILKCRYSM 80
[68][TOP]
>UniRef100_C4M2G1 3' exoribonuclease family protein n=1 Tax=Entamoeba histolytica
HM-1:IMSS RepID=C4M2G1_ENTHI
Length = 238
Score = 67.0 bits (162), Expect = 7e-10
Identities = 34/54 (62%), Positives = 38/54 (70%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
MEY+SPEG RLDGRR EMR+ EI +S ADGSA MGNT V A V+GP E
Sbjct: 1 MEYISPEGYRLDGRRTTEMRKCEMEINFLSTADGSARVRMGNTIVEAVVFGPLE 54
[69][TOP]
>UniRef100_A0B8W3 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Methanosaeta
thermophila PT RepID=A0B8W3_METTP
Length = 245
Score = 67.0 bits (162), Expect = 7e-10
Identities = 31/49 (63%), Positives = 39/49 (79%)
Frame = +3
Query: 315 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
+G+RLDGRR E+R I+ E+G + +ADGS EMG+ KVIAAVYGPREV
Sbjct: 9 DGIRLDGRRFDELRPIKMEVGVLKRADGSCYMEMGDNKVIAAVYGPREV 57
[70][TOP]
>UniRef100_Q12ZB7 Archaeal exosome complex RNA-binding protein n=1
Tax=Methanococcoides burtonii DSM 6242
RepID=Q12ZB7_METBU
Length = 343
Score = 66.6 bits (161), Expect = 1e-09
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
++++ GLRLDGRR E+R + E+G +S+ADGS E GN KV+AAVYGPRE+
Sbjct: 6 VKFIDENGLRLDGRRVDEIRPMTVEMGVLSRADGSCYLEWGNNKVLAAVYGPREL 60
[71][TOP]
>UniRef100_B8D6B9 Probable exosome complex exonuclease 1 n=1 Tax=Desulfurococcus
kamchatkensis 1221n RepID=B8D6B9_DESK1
Length = 242
Score = 65.9 bits (159), Expect = 2e-09
Identities = 28/48 (58%), Positives = 38/48 (79%)
Frame = +3
Query: 315 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
+GLR+DGR+P E+R +R +G + A+GSA+ E GNTK +AAVYGPRE
Sbjct: 10 DGLRIDGRKPEELRPVRIALGVLKNANGSALVEYGNTKALAAVYGPRE 57
[72][TOP]
>UniRef100_UPI0000DB6F09 PREDICTED: similar to putative exosome complex exonuclease RRP41
n=1 Tax=Apis mellifera RepID=UPI0000DB6F09
Length = 268
Score = 65.1 bits (157), Expect = 3e-09
Identities = 29/63 (46%), Positives = 43/63 (68%)
Frame = +3
Query: 318 GLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQIGANK*VTRLW 497
GLRLDGRR +E+RQIR ++G +ADGSA E GNTK++ VYGP + + + +++
Sbjct: 12 GLRLDGRRALELRQIRIKMGVFGQADGSAYIEHGNTKILVTVYGPHQPRNSTGRSTSKIT 71
Query: 498 FGV 506
G+
Sbjct: 72 KGI 74
[73][TOP]
>UniRef100_UPI00005A29C7 PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal
RNA processing protein 41) (Exosome component 4) (p12A)
isoform 4 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A29C7
Length = 244
Score = 65.1 bits (157), Expect = 3e-09
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
+E +S +G R+DGRR E+R+I+A +G ++ADGSA E GNTK +A VYGP E +
Sbjct: 4 LELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEAR 59
[74][TOP]
>UniRef100_UPI00015B5B6C PREDICTED: similar to ENSANGP00000009222 n=1 Tax=Nasonia
vitripennis RepID=UPI00015B5B6C
Length = 270
Score = 64.7 bits (156), Expect = 4e-09
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +3
Query: 309 SPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQIGAN 476
S GLR DGRRP+E+R+IR +G +ADGSA E G TK++A VYGP + + AN
Sbjct: 8 SQGGLRADGRRPLELRRIRLRMGVFGQADGSAYLEQGKTKILATVYGPHQPRGKAN 63
[75][TOP]
>UniRef100_UPI00005A29C8 PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal
RNA processing protein 41) (Exosome component 4) (p12A)
isoform 5 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A29C8
Length = 238
Score = 64.7 bits (156), Expect = 4e-09
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
+E +S +G R+DGRR E+R+I+A +G ++ADGSA E GNTK +A VYGP E
Sbjct: 4 LELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHE 57
[76][TOP]
>UniRef100_Q4Q1B7 Exosome complex exonuclease RRP41, putative n=1 Tax=Leishmania
major RepID=Q4Q1B7_LEIMA
Length = 246
Score = 64.7 bits (156), Expect = 4e-09
Identities = 30/53 (56%), Positives = 37/53 (69%)
Frame = +3
Query: 300 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
EYVSP GLRLDGRRP+E R++ G +S DGS +G +KV A V+GPRE
Sbjct: 6 EYVSPAGLRLDGRRPLEARRMDIAFGTLSACDGSCDITLGQSKVCACVFGPRE 58
[77][TOP]
>UniRef100_B0ERA1 Exosome complex exonuclease RRP41, putative n=1 Tax=Entamoeba
dispar SAW760 RepID=B0ERA1_ENTDI
Length = 238
Score = 64.7 bits (156), Expect = 4e-09
Identities = 32/54 (59%), Positives = 38/54 (70%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
MEY+SPEG RLDGRR EMR+ EI ++ +DGSA MGNT V A V+GP E
Sbjct: 1 MEYISPEGYRLDGRRTTEMRKCEMEINFLNTSDGSARVRMGNTIVEAVVFGPLE 54
[78][TOP]
>UniRef100_B1L6N7 Exosome complex exonuclease 1 n=1 Tax=Candidatus Korarchaeum
cryptofilum OPF8 RepID=B1L6N7_KORCO
Length = 248
Score = 63.9 bits (154), Expect(2) = 5e-09
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +3
Query: 306 VSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
++ EG+R DGR P EMR I+ +G + KADGSA E G +++AAV+GPREV
Sbjct: 13 ITEEGIRTDGRLPHEMRPIKMMVGVLEKADGSAFVEWGGNRILAAVFGPREV 64
Score = 20.4 bits (41), Expect(2) = 5e-09
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 479 MSDQALVRCEYSMA 520
+ D+AL+R Y+MA
Sbjct: 71 LPDRALIRARYNMA 84
[79][TOP]
>UniRef100_A4HPG8 Exosome complex exonuclease RRP41, putative n=1 Tax=Leishmania
braziliensis RepID=A4HPG8_LEIBR
Length = 246
Score = 63.9 bits (154), Expect = 6e-09
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = +3
Query: 300 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
EYVSP GLRLDGRRP+E R++ G +S DGS +G +KV A+++GPRE
Sbjct: 6 EYVSPAGLRLDGRRPLEARRMDIVFGTLSACDGSCDITVGQSKVCASIFGPRE 58
[80][TOP]
>UniRef100_C5A2B9 Probable exosome complex exonuclease 1 n=1 Tax=Thermococcus
gammatolerans EJ3 RepID=ECX1_THEGJ
Length = 249
Score = 63.9 bits (154), Expect = 6e-09
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
++ + G R+DGRR E+R+I E+G + ADGSA E G K++AAVYGPRE+
Sbjct: 8 LKLIDENGRRIDGRRKYELRKIHMEVGVLKNADGSAYIEWGKNKILAAVYGPREI 62
[81][TOP]
>UniRef100_C5KIM5 Exosome complex exonuclease RRP41, putative n=1 Tax=Perkinsus
marinus ATCC 50983 RepID=C5KIM5_9ALVE
Length = 248
Score = 63.5 bits (153), Expect = 8e-09
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
+ E+++ EG RLDGRRP E+R + +IG ADGSA + G TKV+A V+GPR +Q
Sbjct: 4 RQEFLTYEGFRLDGRRPNELRHLTLKIGDAPSADGSATLQQGLTKVVAHVFGPRPLQ 60
[82][TOP]
>UniRef100_B5IEJ8 Exosome complex exonuclease 1 n=1 Tax=Aciduliprofundum boonei T469
RepID=B5IEJ8_9EURY
Length = 243
Score = 63.5 bits (153), Expect = 8e-09
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
++ + GLR+DGR P ++R I+ E+G + +ADGSA E G K+IAAVYGP E
Sbjct: 5 IKLIDDNGLRIDGRLPNQLRPIKMEVGVLKRADGSAFIEWGGNKIIAAVYGPHE 58
[83][TOP]
>UniRef100_UPI0000E4A5EC PREDICTED: similar to ENSANGP00000026025, partial n=2
Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A5EC
Length = 104
Score = 63.2 bits (152), Expect = 1e-08
Identities = 32/49 (65%), Positives = 36/49 (73%)
Frame = +3
Query: 315 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
EG R DGR P+E+R I + GAVS+A GS EM NTKVI AVYGPREV
Sbjct: 4 EGKRQDGRSPLEIRPIFLKAGAVSQAKGSCYMEMKNTKVICAVYGPREV 52
[84][TOP]
>UniRef100_Q649Q0 Ribonuclease PH n=1 Tax=uncultured archaeon GZfos34H10
RepID=Q649Q0_9ARCH
Length = 242
Score = 63.2 bits (152), Expect = 1e-08
Identities = 31/56 (55%), Positives = 40/56 (71%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
KME + +G RL GR E+R I+ E+G + +ADGS FE+GN KVIA VYGPRE+
Sbjct: 5 KMELIK-DGKRLSGRGFEELRPIKIEVGVLKRADGSCYFELGNNKVIAGVYGPREM 59
[85][TOP]
>UniRef100_O29757 Probable exosome complex exonuclease 1 n=1 Tax=Archaeoglobus
fulgidus RepID=ECX1_ARCFU
Length = 258
Score = 63.2 bits (152), Expect = 1e-08
Identities = 32/58 (55%), Positives = 40/58 (68%)
Frame = +3
Query: 288 NLKMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
N K E + +GLRLDGR+ E+R I+ E + +ADGS EMG KVIAAV+GPREV
Sbjct: 5 NEKPEKLIVDGLRLDGRKFDELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREV 62
[86][TOP]
>UniRef100_C6A456 Probable exosome complex exonuclease 1 n=1 Tax=Thermococcus
sibiricus MM 739 RepID=C6A456_THESM
Length = 246
Score = 62.8 bits (151), Expect = 1e-08
Identities = 26/55 (47%), Positives = 39/55 (70%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
++ + G R+DGR+ E+R+I+ E+G + ADGSA E G K++AAVYGPRE+
Sbjct: 7 LKLIDENGYRVDGRKKYELRKIKMEVGVLKSADGSAYVEWGKNKIMAAVYGPREI 61
[87][TOP]
>UniRef100_C8S7M6 Exosome complex exonuclease 1 n=1 Tax=Ferroglobus placidus DSM
10642 RepID=C8S7M6_FERPL
Length = 245
Score = 62.8 bits (151), Expect = 1e-08
Identities = 29/50 (58%), Positives = 36/50 (72%)
Frame = +3
Query: 315 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
+G R+DGR P E+R I+ E G + ADGS EMG KV+AAVYGPR+VQ
Sbjct: 10 DGRRIDGRLPDELRPIKIEAGVLKNADGSCYLEMGKNKVMAAVYGPRKVQ 59
[88][TOP]
>UniRef100_B7R2K9 Exosome complex exonuclease 1 n=1 Tax=Thermococcus sp. AM4
RepID=B7R2K9_9EURY
Length = 248
Score = 62.8 bits (151), Expect = 1e-08
Identities = 26/55 (47%), Positives = 38/55 (69%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
++ + G R+DGR+ E+R+I E+G + ADGSA E G K++AAVYGPRE+
Sbjct: 7 LKLIDENGRRIDGRKKYELRKIHMEVGVLKNADGSAYIEWGKNKILAAVYGPREI 61
[89][TOP]
>UniRef100_Q5JIR6 Probable exosome complex exonuclease 1 n=1 Tax=Thermococcus
kodakarensis RepID=ECX1_PYRKO
Length = 249
Score = 62.8 bits (151), Expect = 1e-08
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
++ + G R+DGR+ E+R I+ E+G + ADGSA E G KV+AAVYGPRE+
Sbjct: 8 LKLIDENGKRIDGRKKYELRPIKMEVGVLKNADGSAYVEWGKNKVLAAVYGPREI 62
[90][TOP]
>UniRef100_A2BKC0 Probable exosome complex exonuclease 1 n=1 Tax=Hyperthermus
butylicus DSM 5456 RepID=ECX1_HYPBU
Length = 255
Score = 62.8 bits (151), Expect = 1e-08
Identities = 29/46 (63%), Positives = 36/46 (78%)
Frame = +3
Query: 321 LRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
+R DGR P ++R IR E+G +S ADGSA+ E G T+VIAAVYGPRE
Sbjct: 24 IRHDGRLPEQLRPIRMEVGVLSNADGSALVEYGGTRVIAAVYGPRE 69
[91][TOP]
>UniRef100_UPI0001758632 PREDICTED: similar to exosome complex exonuclease RRP41, putative
n=1 Tax=Tribolium castaneum RepID=UPI0001758632
Length = 249
Score = 61.6 bits (148), Expect(2) = 2e-08
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = +3
Query: 300 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
E +S GLR DGRR E+R+IR ++G ++ DGSA E G TKV+AAVYGP +V
Sbjct: 6 ELLSKIGLRQDGRRADELRRIRCKLGVFTEPDGSAYLEQGLTKVLAAVYGPHQV 59
Score = 20.8 bits (42), Expect(2) = 2e-08
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2
Query: 485 DQALVRCEYSMA 520
D A+V C++SMA
Sbjct: 67 DSAVVNCQFSMA 78
[92][TOP]
>UniRef100_Q4DGF6 Exosome complex exonuclease RRP41A, putative (Fragment) n=1
Tax=Trypanosoma cruzi RepID=Q4DGF6_TRYCR
Length = 195
Score = 62.4 bits (150), Expect = 2e-08
Identities = 31/56 (55%), Positives = 35/56 (62%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
K EY+SP GLRLDGRRP E R++ E G V DG G V A+VYGPREV
Sbjct: 4 KKEYISPAGLRLDGRRPQESRRMTLEFGKVLGCDGCCTVMSGLATVCASVYGPREV 59
[93][TOP]
>UniRef100_A4ID90 Exosome complex exonuclease RRP41, putative n=1 Tax=Leishmania
infantum RepID=A4ID90_LEIIN
Length = 246
Score = 62.4 bits (150), Expect = 2e-08
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = +3
Query: 300 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
EYVSP GLRLDGRRP+E R++ +S DGS +G +KV A V+GPRE
Sbjct: 6 EYVSPAGLRLDGRRPLEARRMDIAFSTLSACDGSCDITLGQSKVCACVFGPRE 58
[94][TOP]
>UniRef100_Q647V6 Ribonuclease PH n=1 Tax=uncultured archaeon GZfos9D1
RepID=Q647V6_9ARCH
Length = 245
Score = 62.4 bits (150), Expect = 2e-08
Identities = 29/49 (59%), Positives = 37/49 (75%)
Frame = +3
Query: 315 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
+G RLDGR E+R I+ E+G + +ADGS E+GN KVIAAVYGPRE+
Sbjct: 10 DGKRLDGRGFDELRPIKIEVGVLKRADGSCYLELGNNKVIAAVYGPREM 58
[95][TOP]
>UniRef100_B5IVS6 Exosome complex exonuclease 1 n=1 Tax=Thermococcus barophilus MP
RepID=B5IVS6_9EURY
Length = 247
Score = 62.4 bits (150), Expect = 2e-08
Identities = 26/55 (47%), Positives = 38/55 (69%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
++ + G R+DGR+ E+R I+ E+G + ADGSA E G K++AAVYGPRE+
Sbjct: 8 IKLIDENGRRIDGRKKYELRPIKMEVGVLKNADGSAYIEWGKNKILAAVYGPREI 62
[96][TOP]
>UniRef100_B6YSI2 Probable exosome complex exonuclease 1 n=1 Tax=Thermococcus
onnurineus NA1 RepID=ECX1_THEON
Length = 249
Score = 62.4 bits (150), Expect = 2e-08
Identities = 26/55 (47%), Positives = 38/55 (69%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
++ + G R+DGR+ E+R I+ E+G + ADGSA E G K++AAVYGPRE+
Sbjct: 8 LKLIDENGRRIDGRKKYELRPIKMEVGVLKNADGSAYVEWGKNKILAAVYGPREI 62
[97][TOP]
>UniRef100_Q8ZVM9 Probable exosome complex exonuclease 1 n=1 Tax=Pyrobaculum
aerophilum RepID=ECX1_PYRAE
Length = 246
Score = 59.3 bits (142), Expect(2) = 2e-08
Identities = 26/48 (54%), Positives = 35/48 (72%)
Frame = +3
Query: 318 GLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
G+R DGR P +MR+++ +G VS ADGSA+ G T +AAVYGPRE+
Sbjct: 12 GVRADGRTPDQMREVKIAVGVVSNADGSAMVSYGATTAVAAVYGPREM 59
Score = 22.7 bits (47), Expect(2) = 2e-08
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 275 PPLSKLEDGVRQPRRTP 325
PP+ L++GVR RTP
Sbjct: 4 PPVPLLQNGVRADGRTP 20
[98][TOP]
>UniRef100_Q64DM6 Ribonuclease PH n=1 Tax=uncultured archaeon GZfos18B6
RepID=Q64DM6_9ARCH
Length = 242
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
KME + +G RL GR E+R I+ ++G + +ADGS FE+GN K IAAVYGPRE+
Sbjct: 5 KMELIK-DGKRLSGRGFEELRPIKIDVGVLKRADGSCYFELGNNKAIAAVYGPREM 59
[99][TOP]
>UniRef100_Q64CA7 Ribonuclease PH n=1 Tax=uncultured archaeon GZfos24D9
RepID=Q64CA7_9ARCH
Length = 242
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
KME + +G RL GR E+R I+ E+G + +ADGS FE+GN K +AAVYGPRE+
Sbjct: 5 KMELIK-DGKRLSGRGFEELRPIKIEVGLLKRADGSCYFELGNNKALAAVYGPREM 59
[100][TOP]
>UniRef100_A3MUP1 Probable exosome complex exonuclease 1 n=1 Tax=Pyrobaculum
calidifontis JCM 11548 RepID=ECX1_PYRCJ
Length = 246
Score = 62.0 bits (149), Expect = 2e-08
Identities = 27/48 (56%), Positives = 36/48 (75%)
Frame = +3
Query: 318 GLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
GLR DGR P +MR+++ ++G VS ADGSA+ G T +AAVYGPRE+
Sbjct: 12 GLRADGRAPDQMREVQIQVGTVSNADGSAVVSYGATTAVAAVYGPREM 59
[101][TOP]
>UniRef100_Q0W2Y8 Putative exosome complex exonuclease 1 n=1 Tax=uncultured
methanogenic archaeon RC-I RepID=Q0W2Y8_UNCMA
Length = 253
Score = 61.6 bits (148), Expect = 3e-08
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
K E + +G RLDGR P ++R I+ + G + +ADGS E G KV+AAVYGPREV
Sbjct: 3 KPEKLIVDGKRLDGRGPFDLRPIKFQAGVLKRADGSCYLEFGGNKVMAAVYGPREV 58
[102][TOP]
>UniRef100_Q4DZV2 Ribosomal RNA processing protein 41A, putative n=1 Tax=Trypanosoma
cruzi RepID=Q4DZV2_TRYCR
Length = 252
Score = 61.2 bits (147), Expect = 4e-08
Identities = 30/56 (53%), Positives = 35/56 (62%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
K EY++P GLRLDGRRP E R++ E G V DG G V A+VYGPREV
Sbjct: 4 KKEYINPAGLRLDGRRPQESRRMTLEFGKVLGCDGCCTVMSGLATVCASVYGPREV 59
[103][TOP]
>UniRef100_Q64B50 Ribonuclease PH n=1 Tax=uncultured archaeon GZfos27G5
RepID=Q64B50_9ARCH
Length = 247
Score = 61.2 bits (147), Expect = 4e-08
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = +3
Query: 315 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
EG R DGR E+R I+ E+G + +ADGS E+GN KVIAAVYGPRE+
Sbjct: 10 EGKRSDGRGFDELRPIKIEVGVLKRADGSCYLELGNNKVIAAVYGPREM 58
[104][TOP]
>UniRef100_Q38AL8 Exosome complex exonuclease RRP41A n=1 Tax=Trypanosoma brucei
RepID=Q38AL8_9TRYP
Length = 252
Score = 60.8 bits (146), Expect = 5e-08
Identities = 29/54 (53%), Positives = 35/54 (64%)
Frame = +3
Query: 300 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
EY++P GLRLDGRRP E R++ E G +S DG G + V A VYGPREV
Sbjct: 6 EYINPAGLRLDGRRPNEPRRLALEFGKISGCDGCCTVVSGLSHVCATVYGPREV 59
[105][TOP]
>UniRef100_D0A3H8 Exosome complex exonuclease RRP41A (Rrp41p homologue, putative) n=1
Tax=Trypanosoma brucei gambiense DAL972
RepID=D0A3H8_TRYBG
Length = 252
Score = 60.8 bits (146), Expect = 5e-08
Identities = 29/54 (53%), Positives = 35/54 (64%)
Frame = +3
Query: 300 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
EY++P GLRLDGRRP E R++ E G +S DG G + V A VYGPREV
Sbjct: 6 EYINPAGLRLDGRRPNEPRRLALEFGKISGCDGCCTVVSGLSHVCATVYGPREV 59
[106][TOP]
>UniRef100_Q8U0L9 Probable exosome complex exonuclease 1 n=1 Tax=Pyrococcus furiosus
RepID=ECX1_PYRFU
Length = 250
Score = 60.8 bits (146), Expect = 5e-08
Identities = 26/55 (47%), Positives = 38/55 (69%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
++ + G RLDGR+ E+R I+ ++G + A+GSA E G K+IAAVYGPRE+
Sbjct: 8 LKLIDENGRRLDGRKKYELRPIKMKVGVLKNANGSAYIEWGKNKIIAAVYGPREI 62
[107][TOP]
>UniRef100_Q9V119 Probable exosome complex exonuclease 1 n=1 Tax=Pyrococcus abyssi
RepID=ECX1_PYRAB
Length = 249
Score = 60.8 bits (146), Expect = 5e-08
Identities = 26/55 (47%), Positives = 38/55 (69%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
++ + G R+DGR+ E+R I+ E+G + A+GSA E G K+IAAVYGPRE+
Sbjct: 8 LKLIDENGRRIDGRKKYELRPIKMEVGVLKNANGSAYIEWGKNKIIAAVYGPREL 62
[108][TOP]
>UniRef100_Q64D55 Ribonuclease PH n=1 Tax=uncultured archaeon GZfos19A5
RepID=Q64D55_9ARCH
Length = 247
Score = 60.5 bits (145), Expect = 7e-08
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = +3
Query: 315 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
+G RLDGR E+R I+ E+G + +ADGS E+G+ KVIAAVYGPRE+
Sbjct: 10 DGKRLDGRGFDELRPIKIEVGVLKRADGSCYLELGDNKVIAAVYGPREM 58
[109][TOP]
>UniRef100_Q5XQ92 Ribonuclease PH n=1 Tax=uncultured archaeon GZfos26D8
RepID=Q5XQ92_9ARCH
Length = 247
Score = 60.5 bits (145), Expect = 7e-08
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = +3
Query: 315 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
+G RLDGR E+R I+ E+G + +ADGS E+G+ KVIAAVYGPRE+
Sbjct: 10 DGKRLDGRGFDELRPIKIEVGVLKRADGSCYLELGDNKVIAAVYGPREM 58
[110][TOP]
>UniRef100_A7RQ94 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RQ94_NEMVE
Length = 268
Score = 60.1 bits (144), Expect = 9e-08
Identities = 29/51 (56%), Positives = 35/51 (68%)
Frame = +3
Query: 306 VSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
+ +G R DGRRP E+R + G VS+A GSA EM NTKVI A+YGPRE
Sbjct: 30 IRKDGCRQDGRRPDELRPMFLRAGVVSQAKGSAYIEMKNTKVICAIYGPRE 80
[111][TOP]
>UniRef100_Q8PTT8 Probable exosome complex exonuclease 1 n=1 Tax=Methanosarcina mazei
RepID=ECX1_METMA
Length = 493
Score = 60.1 bits (144), Expect = 9e-08
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = +3
Query: 306 VSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
++ +GLRLDGRR E+R ++ E+G +S+ADGS E G K++ V+GPRE
Sbjct: 11 ITDDGLRLDGRRADEIRPMKIEVGVLSRADGSCYLEWGRNKILVGVFGPRE 61
[112][TOP]
>UniRef100_Q9YC03 Probable exosome complex exonuclease 1 n=1 Tax=Aeropyrum pernix
RepID=ECX1_AERPE
Length = 246
Score = 60.1 bits (144), Expect = 9e-08
Identities = 26/48 (54%), Positives = 36/48 (75%)
Frame = +3
Query: 315 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
+G R DGR P ++R +R ++G + ADGSA+ E G T+V+AAVYGPRE
Sbjct: 14 DGRRHDGRLPEDLRPVRMQVGILHNADGSALVEFGRTRVLAAVYGPRE 61
[113][TOP]
>UniRef100_A4WM67 Probable exosome complex exonuclease 1 n=1 Tax=Pyrobaculum
arsenaticum DSM 13514 RepID=ECX1_PYRAR
Length = 246
Score = 59.3 bits (142), Expect(2) = 1e-07
Identities = 26/48 (54%), Positives = 35/48 (72%)
Frame = +3
Query: 318 GLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
G+R DGR P +MR+++ +G VS ADGSA+ G T +AAVYGPRE+
Sbjct: 12 GVRADGRLPDQMREVKISVGVVSNADGSAMVSYGATTAVAAVYGPREM 59
Score = 20.4 bits (41), Expect(2) = 1e-07
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 275 PPLSKLEDGVRQPRRTP 325
PP+ L++GVR R P
Sbjct: 4 PPVPLLQNGVRADGRLP 20
[114][TOP]
>UniRef100_Q17533 Putative exosome complex exonuclease RRP41 n=1 Tax=Caenorhabditis
elegans RepID=EXOS4_CAEEL
Length = 240
Score = 59.7 bits (143), Expect = 1e-07
Identities = 27/54 (50%), Positives = 34/54 (62%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
M +S G R+DGRRP ++R I +G A+GS E GNTKV+ AVYGP E
Sbjct: 1 MNIISEHGFRIDGRRPAQIRNINTRLGLNRNAEGSCYLEHGNTKVLCAVYGPYE 54
[115][TOP]
>UniRef100_A8WQQ5 Putative exosome complex exonuclease RRP41 n=2 Tax=Caenorhabditis
briggsae RepID=EXOS4_CAEBR
Length = 240
Score = 59.7 bits (143), Expect = 1e-07
Identities = 27/54 (50%), Positives = 34/54 (62%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
M +S G R+DGRRP ++R I +G A+GS E GNTKV+ AVYGP E
Sbjct: 1 MSIISEHGFRMDGRRPAQIRNINTRLGLNRNAEGSCYLEHGNTKVLCAVYGPYE 54
[116][TOP]
>UniRef100_C4YA81 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4YA81_CLAL4
Length = 244
Score = 59.3 bits (142), Expect = 2e-07
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGA-VSKADGSAIFEMGNTKVIAAVYGPRE 458
+ME SPEGLR+DGRR E+R+ +I + ADGS+ E GNTKV+ V+GP+E
Sbjct: 3 RMELYSPEGLRVDGRRWNELRRFECKINTHANSADGSSYIEQGNTKVMCMVHGPKE 58
[117][TOP]
>UniRef100_Q6MZC1 Ribonuclease PH n=1 Tax=uncultured archaeon RepID=Q6MZC1_9ARCH
Length = 242
Score = 59.3 bits (142), Expect = 2e-07
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
KME + +G RL GR E+R I+ ++G + +ADGS FE+G+ K +AAVYGPRE+
Sbjct: 5 KMELIK-DGKRLSGRGFEELRPIKIDVGVLKRADGSCYFELGDNKALAAVYGPREM 59
[118][TOP]
>UniRef100_O59223 Probable exosome complex exonuclease 1 n=1 Tax=Pyrococcus
horikoshii RepID=ECX1_PYRHO
Length = 249
Score = 59.3 bits (142), Expect = 2e-07
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
++ + G R+DGR+ E+R I+ ++G + A+GSA E G K+IAAVYGPRE+
Sbjct: 8 LKLIDENGRRIDGRKKYELRPIKMKVGVLKNANGSAYIEWGRNKIIAAVYGPREL 62
[119][TOP]
>UniRef100_Q469M3 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Methanosarcina
barkeri str. Fusaro RepID=Q469M3_METBF
Length = 501
Score = 58.9 bits (141), Expect = 2e-07
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +3
Query: 306 VSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
++ +GLRLDGR E+R ++ EIG +S+ADGS E G KV+ V+GPRE
Sbjct: 9 ITDDGLRLDGRHADEIRPMKIEIGVLSRADGSCYLEWGRNKVLVGVFGPRE 59
[120][TOP]
>UniRef100_B1Y978 Probable exosome complex exonuclease 1 n=1 Tax=Thermoproteus
neutrophilus V24Sta RepID=ECX1_THENV
Length = 246
Score = 58.9 bits (141), Expect = 2e-07
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = +3
Query: 318 GLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
G+R DGR P +MR+++ +G +S ADGSA+ G T +AAVYGPRE+
Sbjct: 12 GVRADGRAPDQMREVQISVGVISNADGSAMVSYGATTAVAAVYGPREM 59
[121][TOP]
>UniRef100_C7DI01 3' exoribonuclease n=1 Tax=Candidatus Micrarchaeum acidiphilum
ARMAN-2 RepID=C7DI01_9EURY
Length = 246
Score = 55.8 bits (133), Expect(2) = 2e-07
Identities = 26/48 (54%), Positives = 35/48 (72%)
Frame = +3
Query: 315 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
+G RLDGR E+R ++ E G ++ A+GSA E GN KV+AAVYGP+E
Sbjct: 13 DGKRLDGRDFNELRPLKIEAGILANANGSAYLEWGNNKVLAAVYGPKE 60
Score = 22.7 bits (47), Expect(2) = 2e-07
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 449 P*RGTNRSQQMSDQALVRCEYSMA 520
P T R +++A+++C YSMA
Sbjct: 58 PKEATPRHLADTNKAIIKCRYSMA 81
[122][TOP]
>UniRef100_A2DCK7 3' exoribonuclease family, domain 1 containing protein n=1
Tax=Trichomonas vaginalis G3 RepID=A2DCK7_TRIVA
Length = 241
Score = 58.5 bits (140), Expect = 3e-07
Identities = 28/61 (45%), Positives = 41/61 (67%)
Frame = +3
Query: 318 GLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQIGANK*VTRLW 497
GLR+DGR P EMR + A+IG + GS+ F++G T+VIA ++GPR+ + G N R+
Sbjct: 9 GLRIDGRPPNEMRLVEAKIGTIPGCTGSSHFKIGQTEVIAQIFGPRDNRSGDNAAEIRVT 68
Query: 498 F 500
F
Sbjct: 69 F 69
[123][TOP]
>UniRef100_Q97BZ5 Probable exosome complex exonuclease 1 n=1 Tax=Thermoplasma
volcanium RepID=ECX1_THEVO
Length = 248
Score = 58.5 bits (140), Expect = 3e-07
Identities = 26/55 (47%), Positives = 38/55 (69%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
K++ ++ + LRLDGR E+R I+ E G +++ADGSA E G K+I VYGP+E
Sbjct: 8 KIKLINEDNLRLDGRSFNELRPIKIEAGVLNRADGSAYIEWGGNKIIVGVYGPKE 62
[124][TOP]
>UniRef100_Q01E66 Putative exonuclease RRP41 (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q01E66_OSTTA
Length = 321
Score = 58.2 bits (139), Expect = 3e-07
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQIG 470
MEYVS EGLRLDGRR E+R+ R ++ DGSA FE+GNT + V GP E + G
Sbjct: 52 MEYVSFEGLRLDGRRANEIRRPRHAFAIDAQCDGSARFELGNTVIECRVDGPSERKFG 109
[125][TOP]
>UniRef100_Q5TMQ4 AGAP011906-PA n=1 Tax=Anopheles gambiae RepID=Q5TMQ4_ANOGA
Length = 308
Score = 58.2 bits (139), Expect = 3e-07
Identities = 29/54 (53%), Positives = 37/54 (68%)
Frame = +3
Query: 300 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
E + +G R DGRR E R+ A+IG VS A GSA E+GNTKVI +V+ PRE+
Sbjct: 35 EALGKDGKRKDGRRLQESRKYYAKIGVVSTAKGSAYVELGNTKVIVSVFDPREI 88
[126][TOP]
>UniRef100_A1RST0 Probable exosome complex exonuclease 1 n=1 Tax=Pyrobaculum
islandicum DSM 4184 RepID=ECX1_PYRIL
Length = 246
Score = 58.2 bits (139), Expect = 3e-07
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +3
Query: 318 GLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
G+R DGR P +MR++ +G VS ADGSA+ G T +AAVYGPRE+
Sbjct: 12 GVRADGRAPDQMREVNITVGIVSNADGSAMVSYGATTAVAAVYGPREM 59
[127][TOP]
>UniRef100_O26779 Probable exosome complex exonuclease 1 n=1 Tax=Methanothermobacter
thermautotrophicus str. Delta H RepID=ECX1_METTH
Length = 240
Score = 53.1 bits (126), Expect(2) = 4e-07
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +3
Query: 321 LRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQI 467
+R DGR E+R ++ E G + +ADGS+ E G K++ AVYGPRE QI
Sbjct: 16 VREDGRAFDELRPLKIEAGILERADGSSYLEFGGNKILVAVYGPREAQI 64
Score = 24.6 bits (52), Expect(2) = 4e-07
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 467 RSQQMSDQALVRCEYSMA 520
R Q D+A++RC Y+MA
Sbjct: 65 RKLQRPDRAVIRCRYNMA 82
[128][TOP]
>UniRef100_Q95Z13 Rrp41p homologue n=1 Tax=Trypanosoma brucei RepID=Q95Z13_9TRYP
Length = 252
Score = 57.8 bits (138), Expect = 5e-07
Identities = 28/54 (51%), Positives = 34/54 (62%)
Frame = +3
Query: 300 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
EY++P GLRLDGRR E R++ E G +S DG G + V A VYGPREV
Sbjct: 6 EYINPAGLRLDGRRQNEPRRLALEFGKISGCDGCCTVVSGLSHVCATVYGPREV 59
[129][TOP]
>UniRef100_C5DCB7 KLTH0B01738p n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DCB7_LACTC
Length = 245
Score = 57.8 bits (138), Expect = 5e-07
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKA-DGSAIFEMGNTKVIAAVYGPREVQIG 470
++E SPEGLR+DGRR E+R++ I + A DGS+ E GN KVI V GP+E ++
Sbjct: 3 RLEIYSPEGLRVDGRRWNELRRLECSINTHANASDGSSYLEQGNNKVITLVTGPQEPKLR 62
Query: 471 ANK*VTRLWFGVS 509
+ VT+ V+
Sbjct: 63 SQMNVTKATISVA 75
[130][TOP]
>UniRef100_Q6BHJ0 DEHA2G18194p n=2 Tax=Debaryomyces hansenii RepID=Q6BHJ0_DEBHA
Length = 245
Score = 57.0 bits (136), Expect = 8e-07
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGA-VSKADGSAIFEMGNTKVIAAVYGPRE 458
+ME SPEGLR+DGRR E+R+ I S +DGS+ E GNTK+I V GP E
Sbjct: 3 RMELYSPEGLRIDGRRWNELRRFECRINTHPSSSDGSSYIEQGNTKIICMVQGPME 58
[131][TOP]
>UniRef100_C5M243 Exosome complex exonuclease RRP41 n=1 Tax=Candida tropicalis
MYA-3404 RepID=C5M243_CANTT
Length = 240
Score = 56.2 bits (134), Expect = 1e-06
Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGA-VSKADGSAIFEMGNTKVIAAVYGPREVQI 467
ME SPEGLR+DGRR E+R+ I + +DGS+ E GNTKV+ V GP E Q+
Sbjct: 1 MELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVVCTVQGPIEPQL 58
[132][TOP]
>UniRef100_A5E3M3 Exosome complex exonuclease RRP41 n=1 Tax=Lodderomyces elongisporus
RepID=A5E3M3_LODEL
Length = 244
Score = 56.2 bits (134), Expect = 1e-06
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGA-VSKADGSAIFEMGNTKVIAAVYGPRE 458
+ME SPEGLR+DGRR E+R+ I + +DGS+ E GNTKVI V GP E
Sbjct: 3 RMELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVICTVIGPME 58
[133][TOP]
>UniRef100_Q9HIP2 Probable exosome complex exonuclease 1 n=1 Tax=Thermoplasma
acidophilum RepID=ECX1_THEAC
Length = 248
Score = 56.2 bits (134), Expect = 1e-06
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
K++ ++ + LRLDGR E+R I+ + G +++ADGSA E G K++ VYGP+E
Sbjct: 8 KIKLINEDNLRLDGRSFNELRPIKIQAGVLNRADGSAYIEWGGNKIMVGVYGPKE 62
[134][TOP]
>UniRef100_B9ACR7 Putative uncharacterized protein n=2 Tax=Methanobrevibacter smithii
RepID=B9ACR7_METSM
Length = 233
Score = 55.8 bits (133), Expect = 2e-06
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +3
Query: 315 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQI 467
E +R DGR+ E+R I+ E G + +ADGSA E+G K++ AVYGPRE I
Sbjct: 3 EMIREDGRKYNELRPIKIEAGVLERADGSAYLEVGGNKILVAVYGPRESYI 53
[135][TOP]
>UniRef100_UPI00016E06CA UPI00016E06CA related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E06CA
Length = 276
Score = 55.8 bits (133), Expect = 2e-06
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Frame = +3
Query: 306 VSPEGLRLDGRR--PMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
VSP+G R DGRR +++R + G VS+A GSA E GNTK++ VYGPRE +
Sbjct: 28 VSPQGPRADGRRRDQVDVRPVFVRCGLVSQAKGSAYIEAGNTKLMCCVYGPRETE 82
[136][TOP]
>UniRef100_B3LI42 Exosome complex exonuclease RRP41 n=1 Tax=Saccharomyces cerevisiae
RM11-1a RepID=B3LI42_YEAS1
Length = 246
Score = 55.8 bits (133), Expect = 2e-06
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGA-VSKADGSAIFEMGNTKVIAAVYGPREVQIG 470
++E SPEGLRLDGRR E+R+ + I ADGS+ E GN K+I V GP+E ++
Sbjct: 3 RLEIYSPEGLRLDGRRWNELRRFESSINTHPHAADGSSYMEQGNNKIITLVKGPKEPRLK 62
Query: 471 ANK*VTRLWFGVS 509
+ ++ VS
Sbjct: 63 SQMDTSKALLNVS 75
[137][TOP]
>UniRef100_A5UJR9 Ribonuclease PH, Rph n=1 Tax=Methanobrevibacter smithii ATCC 35061
RepID=A5UJR9_METS3
Length = 234
Score = 55.8 bits (133), Expect = 2e-06
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +3
Query: 315 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQI 467
E +R DGR+ E+R I+ E G + +ADGSA E+G K++ AVYGPRE I
Sbjct: 4 EMIREDGRKYNELRPIKIEAGVLERADGSAYLEVGGNKILVAVYGPRESYI 54
[138][TOP]
>UniRef100_P46948 Exosome complex component SKI6 n=5 Tax=Saccharomyces cerevisiae
RepID=RRP41_YEAST
Length = 246
Score = 55.8 bits (133), Expect = 2e-06
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGA-VSKADGSAIFEMGNTKVIAAVYGPREVQIG 470
++E SPEGLRLDGRR E+R+ + I ADGS+ E GN K+I V GP+E ++
Sbjct: 3 RLEIYSPEGLRLDGRRWNELRRFESSINTHPHAADGSSYMEQGNNKIITLVKGPKEPRLK 62
Query: 471 ANK*VTRLWFGVS 509
+ ++ VS
Sbjct: 63 SQMDTSKALLNVS 75
[139][TOP]
>UniRef100_A8MA84 Exosome complex exonuclease 1 n=1 Tax=Caldivirga maquilingensis
IC-167 RepID=A8MA84_CALMQ
Length = 242
Score = 55.5 bits (132), Expect = 2e-06
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = +3
Query: 315 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
+G R+DGR P E R + ++G + A+GSA+ GNT V+AAVYGPRE
Sbjct: 12 DGKRVDGRLPEEHRPVTMQVGVLPNANGSALVAYGNTVVLAAVYGPRE 59
[140][TOP]
>UniRef100_Q2NEX5 Putative exosome complex, exonuclease 1 subunit n=1
Tax=Methanosphaera stadtmanae DSM 3091
RepID=Q2NEX5_METST
Length = 232
Score = 53.9 bits (128), Expect(2) = 2e-06
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +3
Query: 315 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
E +R DGR +R ++ E+G ++ ADGSA E GN K++ VYGPRE+
Sbjct: 4 EFIRKDGRAYNTLRNMKMEVGVLNNADGSAYIECGNNKILVGVYGPREI 52
Score = 21.2 bits (43), Expect(2) = 2e-06
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +2
Query: 464 NRSQQMSDQALVRCEYSMA 520
++ D A++RC+Y+MA
Sbjct: 54 SKKHSKPDGAVLRCKYNMA 72
[141][TOP]
>UniRef100_UPI0000D569CA PREDICTED: similar to exosomal 3-5 exoribonuclease complex subunit
Rrp41-like protein n=1 Tax=Tribolium castaneum
RepID=UPI0000D569CA
Length = 282
Score = 55.1 bits (131), Expect = 3e-06
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +3
Query: 246 LSTSFYFFLILLSPNLKMEY---VSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEM 416
+S + F L + +LK ++ V P G R DGR E R+I + G VS+A GSA E+
Sbjct: 13 ISIPYQLFDKLNTKSLKTQFSEIVQPNGTRADGRTSTEHRKIFLKTGVVSQAKGSAYIEL 72
Query: 417 GNTKVIAAVYGPREV 461
TKVI +V+ PRE+
Sbjct: 73 DQTKVIVSVFDPREI 87
[142][TOP]
>UniRef100_Q0V679 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0V679_PHANO
Length = 251
Score = 55.1 bits (131), Expect = 3e-06
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +3
Query: 321 LRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
LRLDGRR E+R+I A+I + ADGS+ EMGNTK++ +V GP E
Sbjct: 13 LRLDGRRWNELRRIHAQISTQAAADGSSYLEMGNTKILVSVTGPAE 58
[143][TOP]
>UniRef100_A3GGM6 Predicted protein n=1 Tax=Pichia stipitis RepID=A3GGM6_PICST
Length = 241
Score = 55.1 bits (131), Expect = 3e-06
Identities = 29/55 (52%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGA-VSKADGSAIFEMGNTKVIAAVYGPRE 458
ME SPEGLR+DGRR E+R I + +DGS+ E GNTKVI V GP E
Sbjct: 1 MELYSPEGLRIDGRRWNEIRNFECRINTHPNSSDGSSYIEQGNTKVICVVQGPME 55
[144][TOP]
>UniRef100_A8A8Z2 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Ignicoccus
hospitalis KIN4/I RepID=A8A8Z2_IGNH4
Length = 241
Score = 54.7 bits (130), Expect = 4e-06
Identities = 24/48 (50%), Positives = 34/48 (70%)
Frame = +3
Query: 315 EGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
+G R DGR P ++R + ++G + ADGSA +G T+V+AAVYGPRE
Sbjct: 12 DGKRHDGRGPADLRPLEMKVGVLYNADGSAWLRIGGTEVVAAVYGPRE 59
[145][TOP]
>UniRef100_B3LAB5 Exosome complex exonuclease rrp41 homolog,putative n=1
Tax=Plasmodium knowlesi strain H RepID=B3LAB5_PLAKH
Length = 246
Score = 54.3 bits (129), Expect = 5e-06
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIG---AVSKADGSAIFEMGNTKVIAAVYGPREVQI 467
+EYV+ EG RLDGR+ E R I+ +G + ADG A +E+GNTK+++ + GP E++
Sbjct: 4 VEYVNEEGYRLDGRKEDECRLIKINVGNENIFTDADGFAFYEIGNTKLLSYIQGPTELKK 63
Query: 468 GANK 479
K
Sbjct: 64 SEEK 67
[146][TOP]
>UniRef100_A5K0X2 Exosome complex exonuclease rrp41, putative n=1 Tax=Plasmodium
vivax RepID=A5K0X2_PLAVI
Length = 246
Score = 54.3 bits (129), Expect = 5e-06
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIG---AVSKADGSAIFEMGNTKVIAAVYGPREVQI 467
+EYV+ EG RLDGR+ E R I+ +G + ADG A +E+GNTK+++ + GP E++
Sbjct: 4 VEYVNEEGYRLDGRKEDECRLIKINVGNENIFTDADGFAFYEIGNTKLLSYIQGPTELKK 63
Query: 468 GANK 479
K
Sbjct: 64 SEEK 67
[147][TOP]
>UniRef100_Q6FSM7 Strain CBS138 chromosome G complete sequence n=1 Tax=Candida
glabrata RepID=Q6FSM7_CANGA
Length = 246
Score = 54.3 bits (129), Expect = 5e-06
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGA-VSKADGSAIFEMGNTKVIAAVYGPRE 458
++E SPEGLRLDGRR E+R+ + I ADGS+ E GN KVI V GP+E
Sbjct: 3 RVEIYSPEGLRLDGRRWNELRRFESAINTHPHAADGSSYLEQGNNKVITLVKGPKE 58
[148][TOP]
>UniRef100_C5E0D5 ZYRO0G11814p n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5E0D5_ZYGRC
Length = 245
Score = 53.9 bits (128), Expect = 7e-06
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGAVS-KADGSAIFEMGNTKVIAAVYGPREVQIG 470
+ E SPEGLR+DGRR E+R+ I S ADGS+ E GN K+I V GP+E +
Sbjct: 3 RFEIYSPEGLRVDGRRWNELRRFDCSINTHSHAADGSSYLEQGNNKIITLVKGPKEPSLR 62
Query: 471 ANK*VTRLWFGVS 509
+ T+ VS
Sbjct: 63 SQMDPTKALLKVS 75
[149][TOP]
>UniRef100_B3T6G7 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured
marine microorganism HF4000_APKG2H5 RepID=B3T6G7_9ZZZZ
Length = 238
Score = 53.5 bits (127), Expect = 9e-06
Identities = 25/54 (46%), Positives = 33/54 (61%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
++ + G R+DGR+P ++R I E+G V A GSA G VIAAVYGP E
Sbjct: 7 VQMIDENGRRMDGRKPADLRPISIEVGVVPVAAGSACVRWGTNHVIAAVYGPME 60
[150][TOP]
>UniRef100_Q4YSB2 Exosome complex exonuclease rrp41, putative n=1 Tax=Plasmodium
berghei RepID=Q4YSB2_PLABE
Length = 246
Score = 53.5 bits (127), Expect = 9e-06
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIG---AVSKADGSAIFEMGNTKVIAAVYGPREVQ 464
+EY++ EG RLDGR+ E R I+ +G + ADG A +E+GNTK+++ + GP E++
Sbjct: 4 LEYINEEGYRLDGRKCNEYRLIKINMGNQNIFNDADGFAFYEIGNTKILSYIQGPTELK 62
[151][TOP]
>UniRef100_Q4XHZ1 Exosome complex exonuclease rrp41, putative (Fragment) n=1
Tax=Plasmodium chabaudi RepID=Q4XHZ1_PLACH
Length = 227
Score = 53.5 bits (127), Expect = 9e-06
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIG---AVSKADGSAIFEMGNTKVIAAVYGPREVQI 467
+EY++ EG RLDGR+ E R I+ +G + ADG A +E+GNTK+++ + GP E++
Sbjct: 4 LEYINEEGYRLDGRKCDEYRLIKINMGNQNIFTDADGFAFYEIGNTKILSYIQGPTELKK 63
Query: 468 GANK 479
+K
Sbjct: 64 SDDK 67
[152][TOP]
>UniRef100_Q75C81 ACR035Wp n=1 Tax=Eremothecium gossypii RepID=Q75C81_ASHGO
Length = 246
Score = 53.5 bits (127), Expect = 9e-06
Identities = 29/56 (51%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGA-VSKADGSAIFEMGNTKVIAAVYGPRE 458
K E SPEGLRLDGRR E+R+ I + ADGS+ E GN K+I V GP E
Sbjct: 3 KTEIYSPEGLRLDGRRWNELRRFECSINTHPTAADGSSYLEQGNNKLITLVTGPHE 58
[153][TOP]
>UniRef100_Q5AMR4 Likely exosome component Ski6p n=1 Tax=Candida albicans
RepID=Q5AMR4_CANAL
Length = 240
Score = 53.5 bits (127), Expect = 9e-06
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGA-VSKADGSAIFEMGNTKVIAAVYGPRE 458
ME SPEGLR+DGRR E+R+ I + +DGS+ E GNTKV+ V GP E
Sbjct: 1 MELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVMCTVQGPIE 55
[154][TOP]
>UniRef100_C4YHN7 Exosome complex exonuclease RRP41 n=1 Tax=Candida albicans
RepID=C4YHN7_CANAL
Length = 240
Score = 53.5 bits (127), Expect = 9e-06
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGA-VSKADGSAIFEMGNTKVIAAVYGPRE 458
ME SPEGLR+DGRR E+R+ I + +DGS+ E GNTKV+ V GP E
Sbjct: 1 MELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVMCTVQGPIE 55
[155][TOP]
>UniRef100_B9WFQ9 Exosome complex exonuclease, putative (Ribosomal rna processing
protein, putative) (3'-to-5' phosphorolytic
exoribonuclease, putative) n=1 Tax=Candida dubliniensis
CD36 RepID=B9WFQ9_CANDC
Length = 240
Score = 53.5 bits (127), Expect = 9e-06
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 297 MEYVSPEGLRLDGRRPMEMRQIRAEIGA-VSKADGSAIFEMGNTKVIAAVYGPRE 458
ME SPEGLR+DGRR E+R+ I + +DGS+ E GNTKV+ V GP E
Sbjct: 1 MELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVMCTVQGPIE 55
[156][TOP]
>UniRef100_B2WKB1 Exosome complex exonuclease RRP41 n=1 Tax=Pyrenophora
tritici-repentis Pt-1C-BFP RepID=B2WKB1_PYRTR
Length = 250
Score = 53.5 bits (127), Expect = 9e-06
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +3
Query: 321 LRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPRE 458
LRLDGRR E+R+I A+I + ADGS+ E GNTK++ +V GP E
Sbjct: 13 LRLDGRRWNELRRIHAQISTQAAADGSSYLEQGNTKILVSVTGPHE 58
[157][TOP]
>UniRef100_A5DGL1 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DGL1_PICGU
Length = 242
Score = 53.5 bits (127), Expect = 9e-06
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +3
Query: 294 KMEYVSPEGLRLDGRRPMEMRQIRAEIGA-VSKADGSAIFEMGNTKVIAAVYGPREVQIG 470
++E SPEGLR+DGRR E+R+ +I + + GS+ E GNTKVI V GP E +
Sbjct: 3 RLELYSPEGLRVDGRRWNELRRFECKINTHPNSSTGSSYVEQGNTKVICMVEGPSEPETR 62
Query: 471 ANK*VTRLWFGVSTA 515
+ V+R V+ A
Sbjct: 63 SQVDVSRATIEVNIA 77
[158][TOP]
>UniRef100_B3TAN7 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured
marine crenarchaeote HF4000_APKG8G2 RepID=B3TAN7_9ARCH
Length = 245
Score = 53.5 bits (127), Expect = 9e-06
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +3
Query: 318 GLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
G+R DGR+ E R++ ++G + ADGSA E G K++A V+GPR+V
Sbjct: 15 GIRSDGRKVNETRKVTIKVGVLKNADGSAYIEFGGNKILAGVFGPRDV 62
[159][TOP]
>UniRef100_B3T985 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured
marine crenarchaeote HF4000_APKG6J21 RepID=B3T985_9ARCH
Length = 245
Score = 53.5 bits (127), Expect = 9e-06
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +3
Query: 318 GLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
G+R DGR+ E R++ ++G + ADGSA E G K++A V+GPR+V
Sbjct: 15 GIRSDGRKVNETRKVTIKVGVLKNADGSAYIEFGGNKILAGVFGPRDV 62
[160][TOP]
>UniRef100_B3T8C1 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured
marine crenarchaeote HF4000_APKG5E24 RepID=B3T8C1_9ARCH
Length = 245
Score = 53.5 bits (127), Expect = 9e-06
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +3
Query: 318 GLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 461
G+R DGR+ E R++ ++G + ADGSA E G K++A V+GPR+V
Sbjct: 15 GIRSDGRKVNETRKVTIKVGVLKNADGSAYIEFGGNKILAGVFGPRDV 62
[161][TOP]
>UniRef100_O42872 Exosome complex component ski6 n=1 Tax=Schizosaccharomyces pombe
RepID=RRP41_SCHPO
Length = 242
Score = 53.5 bits (127), Expect = 9e-06
Identities = 31/69 (44%), Positives = 38/69 (55%)
Frame = +3
Query: 300 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQIGANK 479
E +S EGLR DGRR EMR + IG +GSA E+GNTKV+ V GP E I +
Sbjct: 5 EILSLEGLRNDGRRWDEMRNFQCRIGIEPSENGSAFIELGNTKVLCIVDGPSEPVIKSKA 64
Query: 480 *VTRLWFGV 506
R + V
Sbjct: 65 RADRTFVNV 73