[UP]
[1][TOP]
>UniRef100_Q2HU05 Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
aspartic, catalytic n=1 Tax=Medicago truncatula
RepID=Q2HU05_MEDTR
Length = 1715
Score = 83.6 bits (205), Expect = 9e-15
Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
Frame = -1
Query: 289 NAKPPMFDG--QRFEYWKDRLESFFLGFDADLWDIIVDGYER-PVDADGKKIPRSEMTAD 119
+ K P F+G + F +WK + SF +G D +LWDI+ DG + +D +G I R T
Sbjct: 28 SGKAPKFNGDPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPA 87
Query: 118 QKKLYSQHHKARAILLSAISYEEYQKITDREFAKGIFES 2
QKKLY +HHK R I++++I EY K++D+ AK +F S
Sbjct: 88 QKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFAS 126
[2][TOP]
>UniRef100_Q1S5J6 Reverse transcriptase (RNA-dependent DNA polymerase), putative n=1
Tax=Medicago truncatula RepID=Q1S5J6_MEDTR
Length = 1654
Score = 83.6 bits (205), Expect = 9e-15
Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
Frame = -1
Query: 289 NAKPPMFDG--QRFEYWKDRLESFFLGFDADLWDIIVDGYER-PVDADGKKIPRSEMTAD 119
+ K P F+G + F +WK + SF +G D +LWDI+ DG + +D +G I R T
Sbjct: 28 SGKAPRFNGDPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPA 87
Query: 118 QKKLYSQHHKARAILLSAISYEEYQKITDREFAKGIFES 2
QKKLY +HHK R I++++I EY K++D+ AK +F S
Sbjct: 88 QKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFAS 126
[3][TOP]
>UniRef100_Q2QRW7 Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza
sativa Japonica Group RepID=Q2QRW7_ORYSJ
Length = 1328
Score = 58.9 bits (141), Expect = 2e-07
Identities = 31/95 (32%), Positives = 49/95 (51%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +FDG F +W R++S+ + D D+W + Y IP + TA +K
Sbjct: 7 FSTKPHVFDGTDFSHWCSRIQSYIMAEDYDIWRKVSHAY---------VIPEAINTAAEK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIF 8
+ Q+ KA ILLS ISY +Y + + A I+
Sbjct: 58 TAFEQNCKAHNILLSGISYSDYDHVAHLQTAHEIW 92
[4][TOP]
>UniRef100_Q7X7G6 OSJNBb0006N15.2 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q7X7G6_ORYSJ
Length = 1134
Score = 58.5 bits (140), Expect = 3e-07
Identities = 31/95 (32%), Positives = 50/95 (52%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +FDG F +W R++S+ + D D+W + Y IP + TA +K
Sbjct: 7 FSTKPHVFDGTDFSHWCSRMQSYIMAEDYDIWRKVSHAY---------VIPEAINTAAEK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIF 8
+ Q+ KAR ILLS IS +Y ++ + A I+
Sbjct: 58 TAFEQNCKARNILLSGISRSDYDRVAHLQTAHEIW 92
[5][TOP]
>UniRef100_Q75LG0 Putative integrase n=1 Tax=Oryza sativa Japonica Group
RepID=Q75LG0_ORYSJ
Length = 1507
Score = 57.8 bits (138), Expect = 5e-07
Identities = 31/95 (32%), Positives = 50/95 (52%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +FDG F +W R++S+ + D D+W + Y IP + TA +K
Sbjct: 7 FSTKPHVFDGTDFSHWCSRMQSYIMAEDYDIWRKVSHPY---------VIPEAINTAAEK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIF 8
+ Q+ KAR ILLS IS +Y ++ + A I+
Sbjct: 58 TAFEQNCKARNILLSGISRSDYDRVAHLQTAHEIW 92
[6][TOP]
>UniRef100_Q10GK7 Retrotransposon protein, putative, unclassified n=1 Tax=Oryza
sativa Japonica Group RepID=Q10GK7_ORYSJ
Length = 1523
Score = 57.8 bits (138), Expect = 5e-07
Identities = 31/95 (32%), Positives = 50/95 (52%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +FDG F +W R++S+ + D D+W + Y IP + TA +K
Sbjct: 7 FSTKPHVFDGTDFSHWCSRMQSYIMAEDYDIWRKVSHPY---------VIPEAINTAAEK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIF 8
+ Q+ KAR ILLS IS +Y ++ + A I+
Sbjct: 58 TAFEQNCKARNILLSGISRSDYDRVAHLQTAHEIW 92
[7][TOP]
>UniRef100_Q7XUM5 OSJNBb0002J11.7 protein n=1 Tax=Oryza sativa RepID=Q7XUM5_ORYSA
Length = 1081
Score = 57.4 bits (137), Expect = 7e-07
Identities = 31/95 (32%), Positives = 50/95 (52%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +FDG F +W R++S+ + D D+W + Y IP + TA +K
Sbjct: 7 FSTKPHVFDGTDFSHWYSRMQSYIMAEDYDIWRKVSHTY---------VIPEAINTAAKK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIF 8
+ Q+ KAR ILLS IS +Y ++ + A I+
Sbjct: 58 TAFEQNCKARNILLSGISCSDYDRVAHLQNAHEIW 92
[8][TOP]
>UniRef100_Q01J06 OSIGBa0145C12.6 protein n=1 Tax=Oryza sativa RepID=Q01J06_ORYSA
Length = 1313
Score = 57.4 bits (137), Expect = 7e-07
Identities = 31/95 (32%), Positives = 50/95 (52%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +FDG F +W R++S+ + D D+W + Y IP + TA +K
Sbjct: 7 FSTKPHVFDGTDFSHWYSRMQSYIMAEDYDIWRKVSHTY---------VIPEAINTAAKK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIF 8
+ Q+ KAR ILLS IS +Y ++ + A I+
Sbjct: 58 TAFEQNCKARNILLSGISCSDYDRVAHLQNAHEIW 92
[9][TOP]
>UniRef100_Q6AUQ5 Putative polyprotein n=1 Tax=Oryza sativa Japonica Group
RepID=Q6AUQ5_ORYSJ
Length = 1398
Score = 57.0 bits (136), Expect = 9e-07
Identities = 31/95 (32%), Positives = 50/95 (52%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +FDG F +W R++S+ + D D+W + Y IP + TA +K
Sbjct: 7 FSTKPHVFDGTDFSHWYSRMQSYIMAEDYDIWRKVSHPY---------VIPETINTAAEK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIF 8
+ Q+ KAR ILLS IS +Y ++ + A I+
Sbjct: 58 TAFEQNCKARNILLSGISRLDYNRVAHLQTAHEIW 92
[10][TOP]
>UniRef100_Q7XW16 OSJNBb0013O03.2 protein n=1 Tax=Oryza sativa RepID=Q7XW16_ORYSA
Length = 1028
Score = 56.6 bits (135), Expect = 1e-06
Identities = 30/95 (31%), Positives = 49/95 (51%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +FDG F +W R++S+ + D D+W + Y IP + T +K
Sbjct: 7 FSTKPHVFDGTDFSHWCSRMQSYIMAEDYDIWRKVSHPY---------VIPEAINTTTEK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIF 8
+ Q+ KAR ILLS IS +Y ++ + A I+
Sbjct: 58 TAFEQNCKARNILLSGISRSDYDRVAHLQTAHEIW 92
[11][TOP]
>UniRef100_Q7XG99 Zinc knuckle family protein n=2 Tax=Oryza sativa RepID=Q7XG99_ORYSJ
Length = 669
Score = 56.6 bits (135), Expect = 1e-06
Identities = 31/97 (31%), Positives = 50/97 (51%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +F+G F +W R++S+ + D D+W + Y IP TA +K
Sbjct: 7 FSTKPHVFNGTDFSHWCSRMQSYIMAEDYDIWRKVSHAY---------VIPEVINTAAEK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIFES 2
+ Q+ KAR ILLS IS +Y ++ E A I+ +
Sbjct: 58 TAFEQNCKARNILLSGISRSDYDRVPHLETAHEIWNA 94
[12][TOP]
>UniRef100_Q337Z0 Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza
sativa Japonica Group RepID=Q337Z0_ORYSJ
Length = 1197
Score = 56.6 bits (135), Expect = 1e-06
Identities = 29/86 (33%), Positives = 46/86 (53%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +FDG F +W R++S+ + D D+W + Y IP + TA +K
Sbjct: 7 FSTKPHVFDGTDFSHWCSRMQSYIMAEDYDIWRKVSHAY---------VIPEAINTAAKK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKIT 35
+ Q KAR ILLS IS +Y +++
Sbjct: 58 TAFEQSCKARNILLSGISRSDYDRVS 83
[13][TOP]
>UniRef100_Q2QRW3 Retrotransposon protein, putative, unclassified n=1 Tax=Oryza
sativa Japonica Group RepID=Q2QRW3_ORYSJ
Length = 1290
Score = 55.8 bits (133), Expect = 2e-06
Identities = 29/95 (30%), Positives = 50/95 (52%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +FDG+ F +W ++S+ + D D+W + Y IP + TA +K
Sbjct: 7 FSNKPHVFDGKDFSHWCSSMQSYIMAEDYDIWRKVSHAY---------VIPEAINTAAKK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIF 8
+ Q+ KAR ILLS S+ +Y ++ + A I+
Sbjct: 58 TAFEQNCKARNILLSGFSHSDYDRVAHLQTAHEIW 92
[14][TOP]
>UniRef100_Q2QP29 Retrotransposon protein, putative, unclassified n=1 Tax=Oryza
sativa Japonica Group RepID=Q2QP29_ORYSJ
Length = 1417
Score = 55.8 bits (133), Expect = 2e-06
Identities = 31/95 (32%), Positives = 49/95 (51%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP + DG F +W RL+S+ + D D+W + Y IP + TA +K
Sbjct: 7 FSTKPHVSDGTDFSHWCSRLQSYIMAEDYDIWIKVSHAY---------VIPEAINTAAEK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIF 8
+ Q+ KAR ILLS IS +Y ++ + A I+
Sbjct: 58 TAFEQNCKARNILLSGISRSDYDRVAHLQTAHEIW 92
[15][TOP]
>UniRef100_Q947Z9 Putative retroelement n=1 Tax=Oryza sativa RepID=Q947Z9_ORYSA
Length = 1660
Score = 55.5 bits (132), Expect = 3e-06
Identities = 29/95 (30%), Positives = 49/95 (51%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +FDG F +W R++S+ + D D+W + Y IP + TA +K
Sbjct: 151 FSTKPHVFDGTDFSHWCSRMQSYIMAEDYDIWRKVSHSY---------VIPEAINTAAEK 201
Query: 112 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIF 8
+ Q+ K+ ILLS IS +Y ++ + A I+
Sbjct: 202 TAFEQNCKSHNILLSGISRSDYDRVAHLQTAHEIW 236
[16][TOP]
>UniRef100_Q7XW15 OSJNBb0013O03.3 protein n=1 Tax=Oryza sativa RepID=Q7XW15_ORYSA
Length = 1162
Score = 55.5 bits (132), Expect = 3e-06
Identities = 31/97 (31%), Positives = 50/97 (51%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +FDG F +W R++S+ + D D+W + Y IP + TA +K
Sbjct: 7 FSTKPHVFDGTDFYHWCSRMQSYIMAEDYDIWRKVSHPY---------VIPEAINTAAEK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIFES 2
+ Q+ KAR ILLS IS +Y ++ A I+ +
Sbjct: 58 IAFEQNCKARNILLSGISRSDYDRVAHFRTAHEIWNA 94
[17][TOP]
>UniRef100_Q53MZ6 Retrotransposon protein, putative, unclassified n=1 Tax=Oryza
sativa Japonica Group RepID=Q53MZ6_ORYSJ
Length = 1584
Score = 55.5 bits (132), Expect = 3e-06
Identities = 30/97 (30%), Positives = 49/97 (50%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +FDG F +W R++S+ + D D+W + Y IP + T +K
Sbjct: 7 FSTKPHVFDGTDFSHWCSRMQSYIMAEDYDIWRKVSHPY---------VIPEAINTTAEK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIFES 2
+ Q+ KAR ILLS IS +Y ++ A I+ +
Sbjct: 58 TAFEQNCKARNILLSGISRSDYDRVAHFRTAHEIWNA 94
[18][TOP]
>UniRef100_Q339P3 Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza
sativa Japonica Group RepID=Q339P3_ORYSJ
Length = 794
Score = 55.5 bits (132), Expect = 3e-06
Identities = 29/95 (30%), Positives = 49/95 (51%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +FDG F +W R++S+ + D D+W + Y IP + TA +K
Sbjct: 7 FSTKPHVFDGTDFSHWCSRMQSYIMAEDYDIWRKVSHSY---------VIPEAINTAAEK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIF 8
+ Q+ K+ ILLS IS +Y ++ + A I+
Sbjct: 58 TAFEQNCKSHNILLSGISRSDYDRVAHLQTAHEIW 92
[19][TOP]
>UniRef100_Q2RBH8 Retrotransposon protein, putative, unclassified n=1 Tax=Oryza
sativa Japonica Group RepID=Q2RBH8_ORYSJ
Length = 1258
Score = 55.5 bits (132), Expect = 3e-06
Identities = 31/95 (32%), Positives = 49/95 (51%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +FDG F +W R++ + L D D+W + Y IP + TA +K
Sbjct: 7 FSTKPHVFDGTDFSHWCSRMQFYILAEDYDIWRKVSHPY---------VIPEAINTAAEK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIF 8
+ Q+ KAR ILLS IS +Y ++ + A I+
Sbjct: 58 IAFEQNCKARNILLSGISRSDYDRVAHLQTAHEIW 92
[20][TOP]
>UniRef100_Q8LM60 Putative retroelement n=1 Tax=Oryza sativa Japonica Group
RepID=Q8LM60_ORYSJ
Length = 1499
Score = 55.1 bits (131), Expect = 3e-06
Identities = 29/86 (33%), Positives = 46/86 (53%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ K +FDG F +W R++S+ + D D+W + Y IP + TA +K
Sbjct: 7 FSTKNHVFDGTDFSHWCSRMQSYIMAEDYDIWRKVSHPYV---------IPEAINTAAEK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKIT 35
+ Q+ KAR ILLS IS +Y ++T
Sbjct: 58 TAFEQNCKARNILLSGISRSDYDRVT 83
[21][TOP]
>UniRef100_Q8H8L1 Putative retroelement n=1 Tax=Oryza sativa Japonica Group
RepID=Q8H8L1_ORYSJ
Length = 1099
Score = 55.1 bits (131), Expect = 3e-06
Identities = 29/86 (33%), Positives = 46/86 (53%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ K +FDG F +W R++S+ + D D+W + Y IP + TA +K
Sbjct: 7 FSTKNHVFDGTDFSHWCSRMQSYIMAEDYDIWRKVSHPYV---------IPEAINTAAEK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKIT 35
+ Q+ KAR ILLS IS +Y ++T
Sbjct: 58 TAFEQNCKARNILLSGISRSDYDRVT 83
[22][TOP]
>UniRef100_Q7XH50 Putative copia-type pol polyprotein n=2 Tax=Oryza sativa
RepID=Q7XH50_ORYSJ
Length = 998
Score = 55.1 bits (131), Expect = 3e-06
Identities = 31/97 (31%), Positives = 49/97 (50%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +FDG F +W R++S+ + D D+W + Y IP TA K
Sbjct: 7 FSTKPHVFDGTDFSHWCSRMQSYIMAEDYDIWRKVSHPY---------VIPEVINTAAAK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIFES 2
+ Q+ KAR ILLS IS +Y ++ + A I+ +
Sbjct: 58 TKFEQNCKARNILLSGISRSDYDRVAHFQTAHEIWNA 94
[23][TOP]
>UniRef100_Q339K1 Retrotransposon protein, putative, unclassified n=1 Tax=Oryza
sativa Japonica Group RepID=Q339K1_ORYSJ
Length = 1062
Score = 55.1 bits (131), Expect = 3e-06
Identities = 29/86 (33%), Positives = 46/86 (53%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ K +FDG F +W R++S+ + D D+W + Y IP + TA +K
Sbjct: 7 FSTKNHVFDGTDFSHWCSRMQSYIMAEDYDIWRKVSHPYV---------IPEAINTAAEK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKIT 35
+ Q+ KAR ILLS IS +Y ++T
Sbjct: 58 TAFEQNCKARNILLSGISRSDYDRVT 83
[24][TOP]
>UniRef100_Q2R190 Zinc knuckle family protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q2R190_ORYSJ
Length = 370
Score = 55.1 bits (131), Expect = 3e-06
Identities = 28/88 (31%), Positives = 46/88 (52%)
Frame = -1
Query: 298 DGYNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTAD 119
D ++ KP +F+G F YW D+++S+ + D D+W + YE IP T
Sbjct: 3 DKFSTKPHVFNGVDFPYWCDKMQSYIMAQDYDIWPKVAQPYE---------IPDQINTTA 53
Query: 118 QKKLYSQHHKARAILLSAISYEEYQKIT 35
K + + KAR ILLS IS ++ +++
Sbjct: 54 LKTKFENNCKARNILLSGISRSDFDRVS 81
[25][TOP]
>UniRef100_UPI0000DD9B09 Os11g0138400 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000DD9B09
Length = 1833
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/95 (32%), Positives = 49/95 (51%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +FDG F +W R++S+ + D D+W + Y IP + TA +K
Sbjct: 7 FSTKPHVFDGTDFSHWCSRMKSYIMVEDYDIWRKVSHPY---------VIPEAINTAAEK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIF 8
Q+ KAR ILLS IS +Y ++ + A I+
Sbjct: 58 TALEQNCKARNILLSGISRSDYDRVAHLQTAHEIW 92
[26][TOP]
>UniRef100_Q84VI4 Gag-pol polyprotein n=1 Tax=Glycine max RepID=Q84VI4_SOYBN
Length = 1574
Score = 54.7 bits (130), Expect = 4e-06
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = -1
Query: 283 KPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERP--VDADGKKI----PRSEMTA 122
+PP+ DG +EYWK R+ +F D+ W ++ G+E P +D +GK P + T
Sbjct: 12 RPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDELKPEEDWTK 71
Query: 121 DQKKLYSQHHKARAILLSAISYEEYQKITDREFAKGIFE 5
++ +L + KA L + + ++ I AK +E
Sbjct: 72 EEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWE 110
[27][TOP]
>UniRef100_Q84VH8 Gag-pol polyprotein n=1 Tax=Glycine max RepID=Q84VH8_SOYBN
Length = 1576
Score = 54.7 bits (130), Expect = 4e-06
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = -1
Query: 283 KPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERP--VDADGKKI----PRSEMTA 122
+PP+ DG +EYWK R+ +F D+ W ++ G+E P +D +GK P + T
Sbjct: 12 RPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDELKPEEDWTK 71
Query: 121 DQKKLYSQHHKARAILLSAISYEEYQKITDREFAKGIFE 5
++ +L + KA L + + ++ I AK +E
Sbjct: 72 EEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWE 110
[28][TOP]
>UniRef100_Q53PJ5 Zinc knuckle family protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q53PJ5_ORYSJ
Length = 655
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/97 (31%), Positives = 48/97 (49%)
Frame = -1
Query: 298 DGYNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTAD 119
D ++ KP +FDG F +W R++S+ + D D+W + Y IP T
Sbjct: 3 DRFSTKPHVFDGTDFSHWCSRMQSYIMAKDYDIWRKVSHPY---------VIPEEINTTA 53
Query: 118 QKKLYSQHHKARAILLSAISYEEYQKITDREFAKGIF 8
K + Q+ KAR ILLS IS +Y ++ + A I+
Sbjct: 54 LKLEFEQNCKARNILLSGISRSDYDRVAHLQAAHEIW 90
[29][TOP]
>UniRef100_Q2RAT6 Phosphoglycerate mutase family protein, expressed n=1 Tax=Oryza
sativa Japonica Group RepID=Q2RAT6_ORYSJ
Length = 1024
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/95 (32%), Positives = 49/95 (51%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +FDG F +W R++S+ + D D+W + Y IP + TA +K
Sbjct: 7 FSTKPHVFDGTDFSHWCSRMKSYIMVEDYDIWRKVSHPY---------VIPEAINTAAEK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIF 8
Q+ KAR ILLS IS +Y ++ + A I+
Sbjct: 58 TALEQNCKARNILLSGISRSDYDRVAHLQTAHEIW 92
[30][TOP]
>UniRef100_Q84VH6 Gag-pol polyprotein n=1 Tax=Glycine max RepID=Q84VH6_SOYBN
Length = 1577
Score = 54.3 bits (129), Expect = 6e-06
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = -1
Query: 283 KPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERP--VDADGKKI----PRSEMTA 122
+PP+ DG +EYWK R+ +F D+ W ++ G+E P +D +GK P + T
Sbjct: 12 RPPILDGTNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTNELKPEEDWTK 71
Query: 121 DQKKLYSQHHKARAILLSAISYEEYQKITDREFAKGIFE 5
++ +L + KA L + + ++ I AK +E
Sbjct: 72 EEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWE 110
[31][TOP]
>UniRef100_Q688I4 Putative polyprotein n=1 Tax=Oryza sativa Japonica Group
RepID=Q688I4_ORYSJ
Length = 1282
Score = 54.3 bits (129), Expect = 6e-06
Identities = 31/95 (32%), Positives = 49/95 (51%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +FDG F +W R++S+ + D D+W I Y IP + A +K
Sbjct: 7 FSTKPLVFDGTDFSHWCSRMQSYIMAEDYDIWRKISHPY---------VIPEAINIAAKK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIF 8
+ Q+ KAR ILLS IS +Y ++ + A I+
Sbjct: 58 SDFEQNCKARNILLSGISRSDYDRVAHLQTAHEIW 92
[32][TOP]
>UniRef100_Q53NR2 Retrotransposon protein, putative, unclassified n=1 Tax=Oryza
sativa Japonica Group RepID=Q53NR2_ORYSJ
Length = 1325
Score = 54.3 bits (129), Expect = 6e-06
Identities = 28/85 (32%), Positives = 45/85 (52%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +FDG F +W R++ + + D D+W + Y IP + TA +K
Sbjct: 7 FSTKPHVFDGTDFSHWCSRMQFYIMAEDYDIWRKVSHPY---------VIPEAINTAAEK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKI 38
+ Q+ KAR ILLS IS +Y ++
Sbjct: 58 TAFEQNCKARNILLSGISRSDYDRV 82
[33][TOP]
>UniRef100_Q10NE5 Retrotransposon protein, putative, unclassified n=1 Tax=Oryza
sativa Japonica Group RepID=Q10NE5_ORYSJ
Length = 2111
Score = 53.9 bits (128), Expect = 7e-06
Identities = 26/96 (27%), Positives = 52/96 (54%)
Frame = -1
Query: 289 NAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQKK 110
+ + P FDG + WK +++ + +W ++ G + P D E+T++Q++
Sbjct: 49 SGRAPQFDGTHYAAWKHKMKLHLISLHPSIWKVVCTGVDVPHDD-------MELTSEQEQ 101
Query: 109 LYSQHHKARAILLSAISYEEYQKITDREFAKGIFES 2
L ++ +A +LSA+S EE+ K+ E AK I+++
Sbjct: 102 LIHRNAQASNAILSALSPEEFNKVDGLEEAKEIWDT 137
[34][TOP]
>UniRef100_Q84VI2 Gag-pol polyprotein n=1 Tax=Glycine max RepID=Q84VI2_SOYBN
Length = 1576
Score = 53.5 bits (127), Expect = 1e-05
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Frame = -1
Query: 283 KPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERP--VDADGKKI----PRSEMTA 122
+PP+ DG +EYWK R+ +F D+ W ++ G+E P +D +GK P + T
Sbjct: 12 RPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDELKPEEDWTK 71
Query: 121 DQKKLYSQHHKARAILLSAISYEEYQKITDREFAKGIFE 5
++ +L + KA L + + ++ I AK E
Sbjct: 72 EEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDACE 110
[35][TOP]
>UniRef100_Q53NX9 Retrotransposon protein, putative, unclassified n=1 Tax=Oryza
sativa Japonica Group RepID=Q53NX9_ORYSJ
Length = 1323
Score = 53.5 bits (127), Expect = 1e-05
Identities = 31/95 (32%), Positives = 48/95 (50%)
Frame = -1
Query: 292 YNAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQK 113
++ KP +FDG F +W R++S+ + D D+W + Y IP + TA +K
Sbjct: 7 FSTKPHVFDGTDFFHWCSRMQSYIMAEDYDIWRKVSHPY---------VIPEAINTAAEK 57
Query: 112 KLYSQHHKARAILLSAISYEEYQKITDREFAKGIF 8
+ Q KAR ILLS IS Y ++ + A I+
Sbjct: 58 TAFEQICKARNILLSGISRSGYDRVAHLQTAHEIW 92