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[1][TOP]
>UniRef100_Q99367 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99367_SOYBN
Length = 494
Score = 127 bits (320), Expect(2) = 2e-32
Identities = 59/66 (89%), Positives = 61/66 (92%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTN 336
P YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQT+
Sbjct: 427 PTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTS 486
Query: 335 DKDERG 318
DKD+ G
Sbjct: 487 DKDDGG 492
Score = 35.4 bits (80), Expect(2) = 2e-32
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 414 TSPNYSPTSPSYSPTSP 430
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S
Sbjct: 310 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSP 369
Query: 359 SQYTP 345
S Y+P
Sbjct: 370 S-YSP 373
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 269 TSPSYSPTSPSYSPTSP 285
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 296 PTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 352
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 276 TSPSYSPTSPSYSPTSP 292
Score = 67.8 bits (164), Expect(2) = 2e-13
Identities = 34/53 (64%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SPTYSPSSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 245 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 296
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 303 PTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPA-YSP 359
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 283 TSPSYSPTSPSYSPTSP 299
Score = 31.6 bits (70), Expect(2) = 2e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 227 TSPGYSPTSPGYSPTSP 243
Score = 67.4 bits (163), Expect(2) = 3e-13
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 247 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 303
Score = 31.6 bits (70), Expect(2) = 3e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 234 TSPGYSPTSPGYSPTSP 250
Score = 66.2 bits (160), Expect(2) = 3e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 289 PTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 345
Score = 32.3 bits (72), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 262 TSPAYSPTSPSYSPTSP 278
Score = 64.7 bits (156), Expect(2) = 4e-13
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P Y+P S ++Y+P
Sbjct: 338 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQS-AKYSP 394
Score = 33.5 bits (75), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 290 TSPSYSPTSPSYSPTSP 306
Score = 67.0 bits (162), Expect(2) = 7e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 268 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPS-YSP 324
Score = 30.4 bits (67), Expect(2) = 7e-13
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSP+SP
Sbjct: 241 TSPGYSPTSPTYSPSSP 257
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP Y+P S ++SPS YSPS P SPS S Y+P
Sbjct: 364 YSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPS--SPYSP 413
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 318 TSPSYSPTSPSYSPTSP 334
Score = 67.4 bits (163), Expect(2) = 6e-12
Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P+ YSP+SP YSP+SP S SP YSP+SP +SPS+ GYSP+ P YSP+S S Y+P
Sbjct: 219 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS-YSP 275
Score = 26.9 bits (58), Expect(2) = 6e-12
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS + P YSP+SP
Sbjct: 206 SSPGYSPSSPGYSPSSP 222
Score = 59.7 bits (143), Expect(2) = 3e-11
Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 8/67 (11%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SP S GYSP+ P YSP+S
Sbjct: 324 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSP 383
Query: 359 SQYTPQT 339
S Y PQ+
Sbjct: 384 S-YNPQS 389
Score = 32.3 bits (72), Expect(2) = 3e-11
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P+YSPTSP
Sbjct: 297 TSPSYSPTSPAYSPTSP 313
Score = 67.0 bits (162), Expect = 9e-10
Identities = 35/53 (66%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSPSSP YSPSSP S SP YSP+SP +SP S GYSP+ P YSPSS Y+P
Sbjct: 210 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSP 261
Score = 66.6 bits (161), Expect = 1e-09
Identities = 35/58 (60%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ YSPSSP YSP+SP S SP YSP+SP +SP S YSPS PGYSP+S + Y+P
Sbjct: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 268
Score = 55.5 bits (132), Expect(2) = 2e-09
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 275 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSP 334
Query: 359 SQYTP 345
S Y+P
Sbjct: 335 S-YSP 338
Score = 30.4 bits (67), Expect(2) = 2e-09
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T P+YSPTSP
Sbjct: 255 SSPGYSPTSPAYSPTSP 271
Score = 53.9 bits (128), Expect(2) = 7e-09
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ YSP+SP YSP +SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 254 PSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 313
Query: 359 SQYTP 345
+ Y+P
Sbjct: 314 A-YSP 317
Score = 30.0 bits (66), Expect(2) = 7e-09
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T P YSPTSP
Sbjct: 220 SSPGYSPTSPGYSPTSP 236
Score = 62.8 bits (151), Expect = 2e-08
Identities = 34/56 (60%), Positives = 42/56 (75%), Gaps = 2/56 (3%)
Frame = -3
Query: 500 YSP-SSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
+SP SSP YSPSSP S SP YSP+SP +SP S GYSP+ PGYSP+S + Y+P +
Sbjct: 202 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT-YSPSS 256
Score = 53.5 bits (127), Expect(2) = 3e-08
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 8/60 (13%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSSTSQYTP 345
YSP+SP YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S S Y+P
Sbjct: 231 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPS-YSP 289
Score = 28.5 bits (62), Expect(2) = 3e-08
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS + P YSPTSP
Sbjct: 213 SSPGYSPSSPGYSPTSP 229
Score = 58.9 bits (141), Expect = 2e-07
Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S GYSP+ P YS
Sbjct: 313 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYS 372
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 373 PTSPS-YSP 380
Score = 56.6 bits (135), Expect = 1e-06
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 264 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYS 323
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 324 PTSPS-YSP 331
[2][TOP]
>UniRef100_Q99368 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99368_SOYBN
Length = 977
Score = 120 bits (301), Expect(2) = 3e-30
Identities = 56/64 (87%), Positives = 58/64 (90%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTN 336
P YSPSSPTYSPSSPYNSGVSPDYSP+SPQFSPS GYSPSQPGYSPSSTSQ TPQT+
Sbjct: 914 PTSPSYSPSSPTYSPSSPYNSGVSPDYSPTSPQFSPSAGYSPSQPGYSPSSTSQDTPQTS 973
Query: 335 DKDE 324
DKDE
Sbjct: 974 DKDE 977
Score = 35.4 bits (80), Expect(2) = 3e-30
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 901 TSPNYSPTSPSYSPTSP 917
Score = 65.9 bits (159), Expect(2) = 4e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 810 PTSPSYSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPS-YSP 866
Score = 32.3 bits (72), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 776 TSPAYSPTSPSYSPTSP 792
Score = 63.9 bits (154), Expect(2) = 3e-12
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP YSP+SP S SP YSP+SP +SP S YS + P YSP+S S Y+P
Sbjct: 761 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSSTSPAYSPTSPS-YSP 817
Score = 31.6 bits (70), Expect(2) = 3e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 748 TSPGYSPTSPGYSPTSP 764
Score = 63.5 bits (153), Expect(2) = 1e-11
Identities = 32/53 (60%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SPTYSPSSP S SP YSP+SP +SP S YSP+ P YS S++ Y+P
Sbjct: 759 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPTSPAYS-STSPAYSP 810
Score = 61.2 bits (147), Expect(2) = 1e-11
Identities = 30/53 (56%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YS +SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 808 YSPTSPSYSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPTSPSYSPTSPA-YSP 859
Score = 32.3 bits (72), Expect(2) = 1e-11
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P+YSPTSP
Sbjct: 783 TSPSYSPTSPAYSPTSP 799
Score = 30.0 bits (66), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T P YSPTSP
Sbjct: 741 SSPGYSPTSPGYSPTSP 757
Score = 62.8 bits (151), Expect(2) = 1e-11
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YS +S S Y+P
Sbjct: 782 PTSPSYSPTSPAYSPTSPAYSSTSPAYSPTSPSYSPTSPAYSPTSPSYSLTSPS-YSP 838
Score = 30.4 bits (67), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSP+SP
Sbjct: 755 TSPGYSPTSPTYSPSSP 771
Score = 68.6 bits (166), Expect = 3e-10
Identities = 35/58 (60%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P+ YSPSSP YSP+SP S SP YSP+SP +SPS+ GYSP+ P YSP+S S Y+P
Sbjct: 733 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS-YSP 789
Score = 67.4 bits (163), Expect = 7e-10
Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSPSSP YSPSSP S SP YSP+SP +SP S YSPS PGYSP+S + Y+P
Sbjct: 731 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 782
Score = 55.1 bits (131), Expect(2) = 2e-09
Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YS +SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 796 PTSPAYSSTSPAYSPTSPSYSPTSPAYSPTSPSYSLTSPS--YSPTSPSYSPTSPS-YSP 852
Score = 30.4 bits (67), Expect(2) = 2e-09
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T P+YSPTSP
Sbjct: 769 SSPGYSPTSPAYSPTSP 785
Score = 63.9 bits (154), Expect = 7e-09
Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S+ YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P Y+
Sbjct: 820 PAYSPTSPSYSLTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYN 879
Query: 371 PSSTSQYTP 345
P S ++Y+P
Sbjct: 880 PQS-AKYSP 887
Score = 60.1 bits (144), Expect = 1e-07
Identities = 34/54 (62%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Frame = -3
Query: 500 YSPSS-PTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+SPSS P YSPSSP S SP YSP+SP +SP S GYSP+ P YSPSS Y+P
Sbjct: 723 FSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSP 775
Score = 60.1 bits (144), Expect = 1e-07
Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S+ P+ S YSP+SP+YSP+SP S SP YSP+SP +SP S Y+P YS
Sbjct: 827 PSYSLTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYNPQSAKYS 886
Query: 371 PSSTSQYTPQT 339
PS Y+P +
Sbjct: 887 PSLA--YSPSS 895
Score = 52.4 bits (124), Expect(2) = 2e-07
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
P+ YSP+SP YSP SP SP YSPSSP +SP S YSP+ P YSP+S + Y
Sbjct: 740 PSSPGYSPTSPGYSPTSPGYSP----TSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPA-Y 794
Query: 350 TP 345
+P
Sbjct: 795 SP 796
Score = 26.9 bits (58), Expect(2) = 2e-07
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS + P YSP+SP
Sbjct: 727 SSPGYSPSSPGYSPSSP 743
Score = 58.2 bits (139), Expect = 4e-07
Identities = 35/71 (49%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 813 PSYSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYS 872
Query: 371 PSSTSQYTPQT 339
P+S S Y PQ+
Sbjct: 873 PTSPS-YNPQS 882
[3][TOP]
>UniRef100_UPI0001985649 PREDICTED: similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA
binding / DNA-directed RNA polymerase n=1 Tax=Vitis
vinifera RepID=UPI0001985649
Length = 1848
Score = 113 bits (283), Expect(2) = 4e-28
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTN 336
P YSP+SPTYSP+SPYNSGVSPDYSPSSPQ+SPS GYSPS PGYSPSSTSQYTPQ +
Sbjct: 1781 PTSPSYSPASPTYSPTSPYNSGVSPDYSPSSPQYSPSAGYSPSAPGYSPSSTSQYTPQMS 1840
Query: 335 DKD 327
+KD
Sbjct: 1841 NKD 1843
Score = 35.4 bits (80), Expect(2) = 4e-28
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1768 TSPNYSPTSPSYSPTSP 1784
Score = 69.3 bits (168), Expect(2) = 2e-14
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S S Y+P
Sbjct: 1671 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPS-YSP 1727
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1616 TSPSYSPTSPSYSPTSP 1632
Score = 68.2 bits (165), Expect(2) = 4e-14
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P +YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 PTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1699
Score = 33.5 bits (75), Expect(2) = 4e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1602 TSPSYSPTSPSYSPTSP 1618
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1629 PTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPS-YSP 1685
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1609 TSPSYSPTSPSYSPTSP 1625
Score = 66.2 bits (160), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P Y+PSS ++Y+P
Sbjct: 1692 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSS-AKYSP 1748
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1672 TSPSYSPTSPSYSPTSP 1688
Score = 67.8 bits (164), Expect(2) = 2e-13
Identities = 34/53 (64%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SPTYSPSSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1578 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1629
Score = 31.6 bits (70), Expect(2) = 2e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1560 TSPGYSPTSPGYSPTSP 1576
Score = 67.4 bits (163), Expect(2) = 3e-13
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1580 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1636
Score = 31.6 bits (70), Expect(2) = 3e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1567 TSPGYSPTSPGYSPTSP 1583
Score = 65.9 bits (159), Expect(2) = 4e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 PTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPS-YSP 1678
Score = 64.7 bits (156), Expect(2) = 4e-13
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP Y+PSS ++SPS YSPS P SPS S Y+P
Sbjct: 1718 YSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSLAYSPSSPRLSPS--SPYSP 1767
Score = 33.5 bits (75), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1679 TSPSYSPTSPSYSPTSP 1695
Score = 32.3 bits (72), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1595 TSPAYSPTSPSYSPTSP 1611
Score = 65.9 bits (159), Expect(2) = 2e-12
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1601 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPS-YSP 1657
Score = 30.4 bits (67), Expect(2) = 2e-12
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSP+SP
Sbjct: 1574 TSPGYSPTSPTYSPSSP 1590
Score = 67.4 bits (163), Expect(2) = 6e-12
Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P+ YSP+SP YSP+SP S SP YSP+SP +SPS+ GYSP+ P YSP+S S Y+P
Sbjct: 1552 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS-YSP 1608
Score = 26.9 bits (58), Expect(2) = 6e-12
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS + P YSP+SP
Sbjct: 1539 SSPGYSPSSPGYSPSSP 1555
Score = 57.8 bits (138), Expect(2) = 5e-11
Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 8/67 (11%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SP S GYSP+ P YSP+S
Sbjct: 1678 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSP 1737
Query: 359 SQYTPQT 339
S Y P +
Sbjct: 1738 S-YNPSS 1743
Score = 33.5 bits (75), Expect(2) = 5e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1623 TSPSYSPTSPSYSPTSP 1639
Score = 67.8 bits (164), Expect = 5e-10
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P + P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1643 PTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1702
Query: 359 SQYTP 345
S Y+P
Sbjct: 1703 S-YSP 1706
Score = 67.0 bits (162), Expect = 9e-10
Identities = 35/53 (66%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSPSSP YSPSSP S SP YSP+SP +SP S GYSP+ P YSPSS Y+P
Sbjct: 1543 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSP 1594
Score = 66.6 bits (161), Expect = 1e-09
Identities = 35/58 (60%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ YSPSSP YSP+SP S SP YSP+SP +SP S YSPS PGYSP+S + Y+P
Sbjct: 1545 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 1601
Score = 53.5 bits (127), Expect(2) = 9e-09
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 8/60 (13%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSSTSQYTP 345
YSP+SP YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1564 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPS-YSP 1622
Score = 30.0 bits (66), Expect(2) = 9e-09
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T P YSPTSP
Sbjct: 1553 SSPGYSPTSPGYSPTSP 1569
Score = 62.8 bits (151), Expect = 2e-08
Identities = 34/56 (60%), Positives = 42/56 (75%), Gaps = 2/56 (3%)
Frame = -3
Query: 500 YSP-SSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
+SP SSP YSPSSP S SP YSP+SP +SP S GYSP+ PGYSP+S + Y+P +
Sbjct: 1535 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT-YSPSS 1589
Score = 58.9 bits (141), Expect = 2e-07
Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S GYSP+ P YS
Sbjct: 1667 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYS 1726
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1727 PTSPS-YSP 1734
Score = 54.7 bits (130), Expect = 4e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1597 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYS 1656
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1657 PTSPA-YSP 1664
[4][TOP]
>UniRef100_B9SXC0 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9SXC0_RICCO
Length = 1855
Score = 111 bits (277), Expect(2) = 2e-27
Identities = 53/65 (81%), Positives = 56/65 (86%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTN 336
P YSPSSPTYSPSSPYNSGV PDYSPSSPQ+SPS GYSPS PGYSPSSTSQYT QT+
Sbjct: 1774 PTSPSYSPSSPTYSPSSPYNSGVGPDYSPSSPQYSPSAGYSPSAPGYSPSSTSQYT-QTS 1832
Query: 335 DKDER 321
KD+R
Sbjct: 1833 TKDDR 1837
Score = 35.4 bits (80), Expect(2) = 2e-27
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1761 TSPNYSPTSPSYSPTSP 1777
Score = 68.9 bits (167), Expect(2) = 2e-14
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S GYSP+ P YSP+S S Y+P
Sbjct: 1671 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPS-YSP 1727
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1616 TSPSYSPTSPSYSPTSP 1632
Score = 68.6 bits (166), Expect(2) = 3e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P +YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 PTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1699
Score = 33.5 bits (75), Expect(2) = 3e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1602 TSPSYSPTSPSYSPTSP 1618
Score = 66.2 bits (160), Expect(2) = 2e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1629 PTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPS-YSP 1685
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1609 TSPSYSPTSPSYSPTSP 1625
Score = 67.8 bits (164), Expect(2) = 2e-13
Identities = 34/53 (64%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SPTYSPSSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1578 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1629
Score = 31.6 bits (70), Expect(2) = 2e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1560 TSPGYSPTSPGYSPTSP 1576
Score = 67.4 bits (163), Expect(2) = 3e-13
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1580 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1636
Score = 31.6 bits (70), Expect(2) = 3e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1567 TSPGYSPTSPGYSPTSP 1583
Score = 65.5 bits (158), Expect(2) = 6e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 PTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPS-YSP 1678
Score = 32.3 bits (72), Expect(2) = 6e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1595 TSPAYSPTSPSYSPTSP 1611
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP Y+P S ++SPS YSPS P SPS S Y+P
Sbjct: 1711 YSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPS--SPYSP 1760
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1665 TSPSYSPTSPSYSPTSP 1681
Score = 64.7 bits (156), Expect(2) = 3e-12
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1601 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPA-YSP 1657
Score = 30.4 bits (67), Expect(2) = 3e-12
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSP+SP
Sbjct: 1574 TSPGYSPTSPTYSPSSP 1590
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P+ YSP+SP YSP+SP S SP YSP+SP +SPS+ GYSP+ P YSP+S S Y+P
Sbjct: 1552 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS-YSP 1608
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS + P YSP+SP
Sbjct: 1540 SPGYSPSSPGYSPSSP 1555
Score = 58.5 bits (140), Expect(2) = 3e-11
Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP YSP+SP S SP YSP+SP +SP S Y+P YSPS Y+P +
Sbjct: 1692 PTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLA--YSPSS 1749
Score = 33.5 bits (75), Expect(2) = 3e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1672 TSPSYSPTSPSYSPTSP 1688
Score = 67.0 bits (162), Expect = 9e-10
Identities = 35/53 (66%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSPSSP YSPSSP S SP YSP+SP +SP S GYSP+ P YSPSS Y+P
Sbjct: 1543 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSP 1594
Score = 67.0 bits (162), Expect = 9e-10
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P + P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1643 PTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1702
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1703 A-YSP 1706
Score = 66.6 bits (161), Expect = 1e-09
Identities = 35/58 (60%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ YSPSSP YSP+SP S SP YSP+SP +SP S YSPS PGYSP+S + Y+P
Sbjct: 1545 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 1601
Score = 53.9 bits (128), Expect(2) = 7e-09
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPS 366
P YSP+SP+YSP+SP S SP YSP+SP +SP+ SPS SPS
Sbjct: 1594 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT---SPSYSPTSPS 1640
Score = 30.0 bits (66), Expect(2) = 7e-09
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T P YSPTSP
Sbjct: 1553 SSPGYSPTSPGYSPTSP 1569
Score = 53.5 bits (127), Expect(2) = 2e-08
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 8/60 (13%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSSTSQYTP 345
YSP+SP YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1564 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPS-YSP 1622
Score = 28.5 bits (62), Expect(2) = 2e-08
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS + P YSPTSP
Sbjct: 1546 SSPGYSPSSPGYSPTSP 1562
Score = 61.6 bits (148), Expect = 4e-08
Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 2/56 (3%)
Frame = -3
Query: 500 YSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
+SP+ SP YSPSSP S SP YSP+SP +SP S GYSP+ PGYSP+S + Y+P +
Sbjct: 1535 FSPTLSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT-YSPSS 1589
Score = 58.2 bits (139), Expect = 4e-07
Identities = 35/71 (49%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1667 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYS 1726
Query: 371 PSSTSQYTPQT 339
P+S S Y PQ+
Sbjct: 1727 PTSPS-YNPQS 1736
Score = 55.5 bits (132), Expect = 3e-06
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P Y+
Sbjct: 1674 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN 1733
Query: 371 PSSTSQYTP 345
P S ++Y+P
Sbjct: 1734 PQS-AKYSP 1741
Score = 54.7 bits (130), Expect = 4e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1597 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYS 1656
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1657 PTSPA-YSP 1664
[5][TOP]
>UniRef100_A7NVN8 Chromosome chr18 scaffold_1, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7NVN8_VITVI
Length = 89
Score = 113 bits (283), Expect(2) = 6e-25
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTN 336
P YSP+SPTYSP+SPYNSGVSPDYSPSSPQ+SPS GYSPS PGYSPSSTSQYTPQ +
Sbjct: 22 PTSPSYSPASPTYSPTSPYNSGVSPDYSPSSPQYSPSAGYSPSAPGYSPSSTSQYTPQMS 81
Query: 335 DKD 327
+KD
Sbjct: 82 NKD 84
Score = 24.6 bits (52), Expect(2) = 6e-25
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+S + S T PSYSPTSP
Sbjct: 9 SSYSCSPTSPSYSPTSP 25
[6][TOP]
>UniRef100_P18616 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Arabidopsis
thaliana RepID=RPB1_ARATH
Length = 1840
Score = 89.0 bits (219), Expect(2) = 8e-21
Identities = 45/68 (66%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTN 336
P YSPSSPTYSPSSPY+SG SPDYSPS+ GYSP+ PGYSPSST QYTP
Sbjct: 1769 PTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-------GYSPTLPGYSPSSTGQYTPHEG 1821
Query: 335 D-KDERGK 315
D KD+ GK
Sbjct: 1822 DKKDKTGK 1829
Score = 35.4 bits (80), Expect(2) = 8e-21
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1756 TSPNYSPTSPSYSPTSP 1772
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1638 PTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1694
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S
Sbjct: 1652 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSP 1711
Query: 359 SQYTP 345
S Y+P
Sbjct: 1712 S-YSP 1715
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1597 TSPSYSPTSPSYSPTSP 1613
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1604 TSPSYSPTSPSYSPTSP 1620
Score = 67.8 bits (164), Expect(2) = 2e-13
Identities = 34/53 (64%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SPTYSPSSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1573 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1624
Score = 31.6 bits (70), Expect(2) = 2e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1555 TSPGYSPTSPGYSPTSP 1571
Score = 67.4 bits (163), Expect(2) = 3e-13
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1575 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1631
Score = 31.6 bits (70), Expect(2) = 3e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1562 TSPGYSPTSPGYSPTSP 1578
Score = 65.9 bits (159), Expect(2) = 4e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1617 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPS-YSP 1673
Score = 32.3 bits (72), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1590 TSPAYSPTSPSYSPTSP 1606
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S Y P+ P Y+P S ++Y+P
Sbjct: 1680 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQS-AKYSP 1736
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1625 TSPSYSPTSPSYSPTSP 1641
Score = 65.9 bits (159), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1596 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPA-YSP 1652
Score = 30.4 bits (67), Expect(2) = 2e-12
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSP+SP
Sbjct: 1569 TSPGYSPTSPTYSPSSP 1585
Score = 59.3 bits (142), Expect(2) = 2e-11
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 7/66 (10%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP---GYSPS---STS 357
P YSP+SP+YSP+SP S SP YSP+SP +SP S GYSP+ P SPS ++
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSP 1725
Query: 356 QYTPQT 339
Y PQ+
Sbjct: 1726 SYNPQS 1731
Score = 33.5 bits (75), Expect(2) = 2e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1611 TSPSYSPTSPSYSPTSP 1627
Score = 56.2 bits (134), Expect(2) = 1e-10
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 20/77 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQF--------------------SPSTGY 396
P YSP+SP YSP+SP S SP Y P+SP + SP++ Y
Sbjct: 1694 PTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPY 1753
Query: 395 SPSQPGYSPSSTSQYTP 345
SP+ P YSP+S S Y+P
Sbjct: 1754 SPTSPNYSPTSPS-YSP 1769
Score = 33.5 bits (75), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1660 TSPSYSPTSPSYSPTSP 1676
Score = 67.4 bits (163), Expect = 7e-10
Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P+ YSP+SP YSP+SP S SP YSP+SP +SPS+ GYSP+ P YSP+S S Y+P
Sbjct: 1547 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS-YSP 1603
Score = 66.2 bits (160), Expect = 1e-09
Identities = 34/53 (64%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSPSSP YSP+SP S SP YSP+SP +SP S YSPS PGYSP+S + Y+P
Sbjct: 1545 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 1596
Score = 64.7 bits (156), Expect = 4e-09
Identities = 36/69 (52%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1620 PSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYS 1679
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1680 PTSPS-YSP 1687
Score = 53.5 bits (127), Expect(2) = 9e-09
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 8/60 (13%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSSTSQYTP 345
YSP+SP YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1559 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPS-YSP 1617
Score = 30.0 bits (66), Expect(2) = 9e-09
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T P YSPTSP
Sbjct: 1548 SSPGYSPTSPGYSPTSP 1564
Score = 60.8 bits (146), Expect = 6e-08
Identities = 34/54 (62%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Frame = -3
Query: 500 YSPSS-PTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+SPSS P YSPSSP S SP YSP+SP +SP S GYSP+ P YSPSS Y+P
Sbjct: 1537 FSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSP 1589
Score = 55.8 bits (133), Expect = 2e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1592 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYS 1651
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1652 PTSPA-YSP 1659
[7][TOP]
>UniRef100_Q56Z04 DNA-directed RNA polymerase II largest chain (Fragment) n=1
Tax=Arabidopsis thaliana RepID=Q56Z04_ARATH
Length = 99
Score = 89.0 bits (219), Expect(2) = 9e-21
Identities = 45/68 (66%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTN 336
P YSPSSPTYSPSSPY+SG SPDYSPS+ GYSP+ PGYSPSST QYTP
Sbjct: 28 PTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-------GYSPTLPGYSPSSTGQYTPHEG 80
Query: 335 D-KDERGK 315
D KD+ GK
Sbjct: 81 DKKDKTGK 88
Score = 35.4 bits (80), Expect(2) = 9e-21
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 15 TSPNYSPTSPSYSPTSP 31
[8][TOP]
>UniRef100_B9FZ51 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FZ51_ORYSJ
Length = 1526
Score = 82.4 bits (202), Expect(2) = 1e-18
Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 3/67 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNS--GVSPDYSPSSPQFSPSTGYSPSQPGYSPSST-SQYTP 345
P YS SP+YSP+SPY + G SPDYSP+SP +SPS YSP+ PGYSPSST Q++P
Sbjct: 1456 PTSPSYSQPSPSYSPTSPYTTSGGPSPDYSPTSPNYSPSGSYSPTAPGYSPSSTGQQFSP 1515
Query: 344 QTNDKDE 324
Q DKD+
Sbjct: 1516 QAADKDK 1522
Score = 34.3 bits (77), Expect(2) = 1e-18
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T P+YSPTSP
Sbjct: 1443 TSPNYSPTSPTYSPTSP 1459
Score = 68.6 bits (166), Expect(2) = 3e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P +YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1314 PTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1370
Score = 33.5 bits (75), Expect(2) = 3e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1266 TSPSYSPTSPSYSPTSP 1282
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S
Sbjct: 1342 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSP 1401
Query: 359 SQYTP 345
S Y+P
Sbjct: 1402 S-YSP 1405
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1287 TSPSYSPTSPSYSPTSP 1303
Score = 66.2 bits (160), Expect(2) = 2e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1300 PTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPS-YSP 1356
Score = 66.2 bits (160), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P Y+PSS ++Y+P
Sbjct: 1370 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSS-AKYSP 1426
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1273 TSPSYSPTSPSYSPTSP 1289
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1336 TSPSYSPTSPSYSPTSP 1352
Score = 67.4 bits (163), Expect(2) = 3e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1258 PGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1314
Score = 31.6 bits (70), Expect(2) = 3e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS PSYSPTSP
Sbjct: 1238 TSPSYSPASPSYSPTSP 1254
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1279 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPA-YSP 1335
Score = 62.4 bits (150), Expect(2) = 2e-12
Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS--TSQYTP 345
YSP+SP+YSP+SP S SP Y+PSS ++SPS YSPS P SP S + Y+P
Sbjct: 1396 YSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSHAYSPSSPRLSPYSQTSPNYSP 1449
Score = 33.5 bits (75), Expect(2) = 2e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1343 TSPSYSPTSPSYSPTSP 1359
Score = 31.2 bits (69), Expect(2) = 2e-12
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T PSYSPTSP
Sbjct: 1260 SPTYSPTSPSYSPTSP 1275
Score = 67.0 bits (162), Expect(2) = 5e-12
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P SPTYSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1251 PTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1307
Score = 27.7 bits (60), Expect(2) = 5e-12
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 547 PNYSXTFPSYSPTSP 503
P YS T PSYSP SP
Sbjct: 1233 PGYSPTSPSYSPASP 1247
Score = 58.9 bits (141), Expect(2) = 2e-11
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG-YSPSQPGYSPSS 363
P YSP+SP YSP+SP S SP+YSP+SP ++PS+ YSPS YSPSS
Sbjct: 1384 PTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSH-AYSPSS 1434
Score = 33.5 bits (75), Expect(2) = 2e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1350 TSPSYSPTSPSYSPTSP 1366
Score = 55.5 bits (132), Expect(2) = 2e-10
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 7/64 (10%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP---GYSPS---STS 357
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P SPS ++
Sbjct: 1328 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1387
Query: 356 QYTP 345
Y+P
Sbjct: 1388 AYSP 1391
Score = 33.5 bits (75), Expect(2) = 2e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1280 TSPSYSPTSPSYSPTSP 1296
Score = 55.1 bits (131), Expect(2) = 3e-10
Identities = 34/67 (50%), Positives = 40/67 (59%), Gaps = 10/67 (14%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSP-YN---SGVSPD--YSPSSPQFSP----STGYSPSQPGYSPS 366
P YSP+SP YSP+SP YN + SP YSPSSP+ SP S YSP+ P YSP+
Sbjct: 1398 PTSPSYSPTSPNYSPTSPSYNPSSAKYSPSHAYSPSSPRLSPYSQTSPNYSPTSPTYSPT 1457
Query: 365 STSQYTP 345
S S P
Sbjct: 1458 SPSYSQP 1464
Score = 33.5 bits (75), Expect(2) = 3e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1357 TSPSYSPTSPSYSPTSP 1373
Score = 68.2 bits (165), Expect = 4e-10
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P + P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1314 PTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1373
Query: 359 SQYTP 345
S Y+P
Sbjct: 1374 S-YSP 1377
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+Y+P SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1249 YSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1300
Score = 64.3 bits (155), Expect = 6e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP Y+P SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1235 YSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPS-YSP 1286
Score = 64.3 bits (155), Expect = 6e-09
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1237 PTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1293
Score = 54.3 bits (129), Expect(2) = 1e-08
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
P YSP+SP+YSP SP SP YSP+SP +SP S YSP+ P YSP+S S Y
Sbjct: 1286 PTSPSYSPTSPSYSPTSPSYSP----TSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPS-Y 1340
Query: 350 TP 345
+P
Sbjct: 1341 SP 1342
Score = 28.5 bits (62), Expect(2) = 1e-08
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+Y+ P+YSPTSP
Sbjct: 1252 TSPSYTPGSPTYSPTSP 1268
Score = 59.7 bits (143), Expect = 1e-07
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ +YSP P YSP+SP S SP YSP+SP ++P S YSP+ P YSP+S S Y+P
Sbjct: 1224 PSSPVYSPG-PGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPS-YSP 1279
Score = 58.5 bits (140), Expect = 3e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S GYSP+ P YS
Sbjct: 1345 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYS 1404
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1405 PTSPN-YSP 1412
Score = 55.1 bits (131), Expect = 3e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1261 PTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYS 1320
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1321 PTSPA-YSP 1328
[9][TOP]
>UniRef100_Q6ZJR1 DNA-directed RNA polymerase largest chain-like protein n=1
Tax=Oryza sativa Japonica Group RepID=Q6ZJR1_ORYSJ
Length = 138
Score = 82.4 bits (202), Expect(2) = 2e-18
Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 3/67 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNS--GVSPDYSPSSPQFSPSTGYSPSQPGYSPSST-SQYTP 345
P YS SP+YSP+SPY + G SPDYSP+SP +SPS YSP+ PGYSPSST Q++P
Sbjct: 68 PTSPSYSQPSPSYSPTSPYTTSGGPSPDYSPTSPNYSPSGSYSPTAPGYSPSSTGQQFSP 127
Query: 344 QTNDKDE 324
Q DKD+
Sbjct: 128 QAADKDK 134
Score = 34.3 bits (77), Expect(2) = 2e-18
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T P+YSPTSP
Sbjct: 55 TSPNYSPTSPTYSPTSP 71
[10][TOP]
>UniRef100_C5YGY9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5YGY9_SORBI
Length = 1857
Score = 78.6 bits (192), Expect(2) = 3e-17
Identities = 39/66 (59%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNS--GVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQ 342
P YS SP+YSP+SP+N+ G SPDYSP+SP +SPS YSP+ PGYSPSST Q
Sbjct: 1792 PTSPSYSQPSPSYSPTSPFNTSGGPSPDYSPTSPNYSPSGSYSPTAPGYSPSSTG----Q 1847
Query: 341 TNDKDE 324
NDKD+
Sbjct: 1848 GNDKDD 1853
Score = 33.5 bits (75), Expect(2) = 3e-17
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1735 TSPSYSPTSPSYSPTSP 1751
Score = 68.6 bits (166), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P +YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1650 PTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1706
Score = 34.3 bits (77), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T P+YSPTSP
Sbjct: 1595 TSPNYSPTSPTYSPTSP 1611
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S
Sbjct: 1678 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSP 1737
Query: 359 SQYTP 345
S Y+P
Sbjct: 1738 S-YSP 1741
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1623 TSPSYSPTSPSYSPTSP 1639
Score = 66.2 bits (160), Expect(2) = 2e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1636 PTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPS-YSP 1692
Score = 66.2 bits (160), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P Y+PSS ++Y+P
Sbjct: 1706 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSS-AKYSP 1762
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1609 TSPSYSPTSPSYSPTSP 1625
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1672 TSPSYSPTSPSYSPTSP 1688
Score = 64.7 bits (156), Expect(2) = 6e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1615 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPA-YSP 1671
Score = 33.1 bits (74), Expect(2) = 6e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1602 TSPTYSPTSPSYSPTSP 1618
Score = 61.2 bits (147), Expect(2) = 4e-12
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS--TSQYTP 345
YSP+SP+YSP+SP S SP Y+PSS ++SPS YSPS P +P S + Y+P
Sbjct: 1732 YSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSHAYSPSSPRMTPYSQTSPSYSP 1785
Score = 33.5 bits (75), Expect(2) = 4e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1679 TSPSYSPTSPSYSPTSP 1695
Score = 58.5 bits (140), Expect(2) = 3e-11
Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG-YSPSQPGYSPSS 363
P YSP+SP YSP+SP S SP YSP+SP ++PS+ YSPS YSPSS
Sbjct: 1720 PTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSH-AYSPSS 1770
Score = 33.5 bits (75), Expect(2) = 3e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1686 TSPSYSPTSPSYSPTSP 1702
Score = 57.8 bits (138), Expect(2) = 5e-11
Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 8/67 (11%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SP S GYSP+ P YSP+S
Sbjct: 1692 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSP 1751
Query: 359 SQYTPQT 339
S Y P +
Sbjct: 1752 S-YNPSS 1757
Score = 33.5 bits (75), Expect(2) = 5e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1637 TSPSYSPTSPSYSPTSP 1653
Score = 55.5 bits (132), Expect(2) = 2e-10
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 7/64 (10%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP---GYSPS---STS 357
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P SPS ++
Sbjct: 1664 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1723
Query: 356 QYTP 345
Y+P
Sbjct: 1724 AYSP 1727
Score = 33.5 bits (75), Expect(2) = 2e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1616 TSPSYSPTSPSYSPTSP 1632
Score = 68.9 bits (167), Expect = 2e-10
Identities = 37/65 (56%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN YSP+SPTYSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1590 PTYSPTSPN---YSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1646
Query: 359 SQYTP 345
S Y+P
Sbjct: 1647 S-YSP 1650
Score = 68.2 bits (165), Expect = 4e-10
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P + P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1650 PTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1709
Query: 359 SQYTP 345
S Y+P
Sbjct: 1710 S-YSP 1713
Score = 54.3 bits (129), Expect(2) = 5e-10
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 10/67 (14%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSP-YN---SGVSPD--YSPSSPQFSP----STGYSPSQPGYSPS 366
P YSP+SP+YSP+SP YN + SP YSPSSP+ +P S YSP+ P YSP+
Sbjct: 1734 PTSPSYSPTSPSYSPTSPSYNPSSAKYSPSHAYSPSSPRMTPYSQTSPSYSPTSPTYSPT 1793
Query: 365 STSQYTP 345
S S P
Sbjct: 1794 SPSYSQP 1800
Score = 33.5 bits (75), Expect(2) = 5e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1693 TSPSYSPTSPSYSPTSP 1709
Score = 67.0 bits (162), Expect = 9e-10
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1587 PGSPTYSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1643
Score = 66.6 bits (161), Expect = 1e-09
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P SPTYSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1580 PTSPSYTPGSPTYSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1636
Score = 65.5 bits (158), Expect = 3e-09
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = -3
Query: 548 SKL*PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
S L P S P+ YSP+SP+Y+P SP S SP+YSP+SP +SP S YSP+ P YS
Sbjct: 1565 SPLSPSYSPASPS---YSPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTSPSYSPTSPSYS 1621
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1622 PTSPS-YSP 1629
Score = 62.8 bits (151), Expect = 2e-08
Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = -3
Query: 527 SIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
S VF YSP SP+YSP+SP S SP Y+P SP +SP S YSP+ P YSP+S S Y
Sbjct: 1555 SPVFTPEKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTSPS-Y 1613
Query: 350 TP 345
+P
Sbjct: 1614 SP 1615
Score = 59.7 bits (143), Expect = 1e-07
Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S GYSP+ P YS
Sbjct: 1681 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYS 1740
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1741 PTSPS-YSP 1748
Score = 57.4 bits (137), Expect = 7e-07
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 7/65 (10%)
Frame = -3
Query: 518 FPNISIYSPSSPTYSPSSPY------NSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
FP+ YSPSS YSPSSP S +SP YSP+SP +SP S Y+P P YSP+S
Sbjct: 1538 FPSPGGYSPSSGGYSPSSPVFTPEKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSPTSP 1597
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1598 N-YSP 1601
Score = 57.0 bits (136), Expect = 9e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1611 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYS 1670
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1671 PTSPS-YSP 1678
[11][TOP]
>UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium
discoideum RepID=RPB1_DICDI
Length = 1727
Score = 73.9 bits (180), Expect(2) = 8e-16
Identities = 38/66 (57%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSS---TSQYT 348
P YSP+SP+YSP+SP S SP YSPSSP +SPS+ YSPS P YSPSS T++Y
Sbjct: 1660 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPTFTNKYN 1719
Query: 347 PQTNDK 330
Q N+K
Sbjct: 1720 YQPNNK 1725
Score = 33.5 bits (75), Expect(2) = 8e-16
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1605 TSPSYSPTSPSYSPTSP 1621
Score = 70.5 bits (171), Expect(2) = 8e-15
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SPS+ YSPS P YSPSS S Y+P +
Sbjct: 1653 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPS-YSPSS 1711
Score = 33.5 bits (75), Expect(2) = 8e-15
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1612 TSPSYSPTSPSYSPTSP 1628
Score = 69.7 bits (169), Expect(2) = 1e-14
Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSPS P YSPSS S Y+P +
Sbjct: 1646 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPS-YSPSS 1704
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1619 TSPSYSPTSPSYSPTSP 1635
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1604 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1660
Score = 35.8 bits (81), Expect(2) = 2e-14
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
TSP+YS T PSYSPTSPF
Sbjct: 1584 TSPSYSPTSPSYSPTSPF 1601
Score = 68.9 bits (167), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP+ S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1583 PTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1639
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1556 TSPSYSPTSPSYSPTSP 1572
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1625 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1681
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1570 TSPSYSPTSPSYSPTSP 1586
Score = 65.9 bits (159), Expect(2) = 9e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1562 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPS-YSP 1618
Score = 31.2 bits (69), Expect(2) = 9e-13
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T PSYSPTSP
Sbjct: 1550 SPTYSPTSPSYSPTSP 1565
Score = 57.4 bits (137), Expect(2) = 6e-11
Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 8/67 (11%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPSS
Sbjct: 1632 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1691
Query: 359 SQYTPQT 339
S Y+P +
Sbjct: 1692 S-YSPSS 1697
Score = 33.5 bits (75), Expect(2) = 6e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1577 TSPSYSPTSPSYSPTSP 1593
Score = 65.9 bits (159), Expect(2) = 5e-10
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1555 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPS-YSP 1611
Score = 21.9 bits (45), Expect(2) = 5e-10
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+S Y P+YSPTSP
Sbjct: 1542 SSYQYFPQSPTYSPTSP 1558
Score = 67.4 bits (163), Expect = 7e-10
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 518 FPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
FP YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1547 FPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1599
Score = 65.1 bits (157), Expect = 3e-09
Identities = 32/53 (60%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y P SPTYSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1546 YFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1597
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1607 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1666
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1667 PTSPS-YSP 1674
Score = 56.6 bits (135), Expect = 1e-06
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1558 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYS 1617
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1618 PTSPS-YSP 1625
Score = 56.6 bits (135), Expect = 1e-06
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1600 PFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1659
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1660 PTSPS-YSP 1667
Score = 54.7 bits (130), Expect = 4e-06
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1569 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSP 1628
Query: 359 SQYTP 345
S Y+P
Sbjct: 1629 S-YSP 1632
[12][TOP]
>UniRef100_Q30BD9 DNA-directed RNA polymerase n=1 Tax=Glaucocystis nostochinearum
RepID=Q30BD9_9EUKA
Length = 1852
Score = 73.2 bits (178), Expect(2) = 1e-15
Identities = 39/64 (60%), Positives = 43/64 (67%), Gaps = 7/64 (10%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTS------ 357
P YSP+SP+YSPSSP S SP YSPSSP +SPS+ YSPS P YSPSS S
Sbjct: 1723 PTSPSYSPTSPSYSPSSPSCSPASPTYSPSSPSYSPSSPSYSPSSPSYSPSSPSYSPSSP 1782
Query: 356 QYTP 345
QYTP
Sbjct: 1783 QYTP 1786
Score = 33.5 bits (75), Expect(2) = 1e-15
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1668 TSPSYSPTSPSYSPTSP 1684
Score = 68.2 bits (165), Expect(2) = 4e-14
Identities = 38/63 (60%), Positives = 43/63 (68%), Gaps = 6/63 (9%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSP-----SQPGYSPSSTSQ 354
P+ YSPSSP+YSPSSP S SP YSPSSPQ++P S YSP S P YSP TSQ
Sbjct: 1751 PSSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPQYTPASANYSPPSPLHSSPAYSP--TSQ 1808
Query: 353 YTP 345
Y+P
Sbjct: 1809 YSP 1811
Score = 33.5 bits (75), Expect(2) = 4e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1696 TSPSYSPTSPSYSPTSP 1712
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP++SP S YSP+ PGYSP+S
Sbjct: 1611 PTSPAYSPTSPSYSPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPGYSPTSP 1670
Query: 359 SQYTP 345
S Y+P
Sbjct: 1671 S-YSP 1674
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1591 TSPSYSPTSPSYSPTSP 1607
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1646 PTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1702
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1598 TSPSYSPTSPSYSPTSP 1614
Score = 68.2 bits (165), Expect(2) = 2e-13
Identities = 33/53 (62%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S S Y+P
Sbjct: 1588 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPGYSPTSPS-YSP 1639
Score = 31.6 bits (70), Expect(2) = 2e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS + PSYSPTSP
Sbjct: 1577 TSPGYSASSPSYSPTSP 1593
Score = 66.2 bits (160), Expect(2) = 2e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1639 PTSPRYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1695
Score = 33.1 bits (74), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1626 TSPGYSPTSPSYSPTSP 1642
Score = 64.7 bits (156), Expect(2) = 4e-13
Identities = 35/72 (48%), Positives = 44/72 (61%), Gaps = 12/72 (16%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSP------------SSPQFSPSTGYSPSQPGYS 372
P+ YSPSSP+YSPSSP S SP Y+P SSP +SP++ YSP+ P Y
Sbjct: 1758 PSSPSYSPSSPSYSPSSPSYSPSSPQYTPASANYSPPSPLHSSPAYSPTSQYSPTSPAYG 1817
Query: 371 PSSTSQYTPQTN 336
SS + YTPQ+N
Sbjct: 1818 ASSPA-YTPQSN 1828
Score = 33.5 bits (75), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1717 TSPSYSPTSPSYSPTSP 1733
Score = 63.5 bits (153), Expect(2) = 9e-13
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P SP+S S Y+P
Sbjct: 1667 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPS-YSP 1723
Score = 63.5 bits (153), Expect(2) = 9e-13
Identities = 31/54 (57%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 357
P YSP+SP+YSP+SP S SP SP+SP +SP S YSP+ P YSPSS S
Sbjct: 1688 PTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSYSPTSPSYSPTSPSYSPSSPS 1741
Score = 63.5 bits (153), Expect(2) = 9e-13
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSPS P SP+S + Y+P +
Sbjct: 1695 PTSPSYSPTSPSYSPTSPSCSPTSPSYSPTSPSYSPTSPSYSPSSPSCSPASPT-YSPSS 1753
Score = 33.5 bits (75), Expect(2) = 9e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1647 TSPSYSPTSPSYSPTSP 1663
Score = 33.5 bits (75), Expect(2) = 9e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1675 TSPSYSPTSPSYSPTSP 1691
Score = 33.5 bits (75), Expect(2) = 9e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1682 TSPSYSPTSPSYSPTSP 1698
Score = 67.4 bits (163), Expect(2) = 3e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S GYSP+ P YSP+S +Y+P
Sbjct: 1590 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPGYSPTSPSYSPTS-PRYSP 1646
Score = 27.7 bits (60), Expect(2) = 3e-12
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS P YSPTSP
Sbjct: 1564 SPSYSAASPRYSPTSP 1579
Score = 59.7 bits (143), Expect(2) = 2e-11
Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1681 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPS--YSPTSPSYSPTSPS-YSP 1737
Query: 344 QT 339
+
Sbjct: 1738 SS 1739
Score = 33.1 bits (74), Expect(2) = 2e-11
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1640 TSPRYSPTSPSYSPTSP 1656
Score = 57.8 bits (138), Expect(2) = 5e-11
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P+ SP+SPTYSPSSP S SP YSPSSP SPS YSPS P Y+P+S + Y+P
Sbjct: 1737 PSSPSCSPASPTYSPSSPSYSPSSPSYSPSSPSYSPSSPS--YSPSSPQYTPAS-ANYSP 1793
Score = 33.5 bits (75), Expect(2) = 5e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1689 TSPSYSPTSPSYSPTSP 1705
Score = 58.2 bits (139), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1653 PTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1709
Score = 32.3 bits (72), Expect(2) = 8e-11
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P+YSPTSP
Sbjct: 1605 TSPSYSPTSPAYSPTSP 1621
Score = 57.4 bits (137), Expect(2) = 1e-10
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 8/60 (13%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S GYSP+ P YSP+S S Y+P
Sbjct: 1630 YSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPS-YSP 1688
Score = 32.3 bits (72), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1612 TSPAYSPTSPSYSPTSP 1628
Score = 63.2 bits (152), Expect(2) = 5e-10
Identities = 32/53 (60%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP YS SSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1574 YSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPS-YSP 1625
Score = 24.6 bits (52), Expect(2) = 5e-10
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS PSYS SP
Sbjct: 1557 SPSYSPASPSYSAASP 1572
Score = 60.8 bits (146), Expect = 6e-08
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YS +SP S SP YS SSP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1560 YSPASPSYSAASPRYSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1611
Score = 60.8 bits (146), Expect = 6e-08
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YS +SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1567 YSAASPRYSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPA-YSP 1618
Score = 59.3 bits (142), Expect = 2e-07
Identities = 32/54 (59%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Frame = -3
Query: 500 YSPSSPTYSPSSP-YNSGVSPDYSPSSPQFS-PSTGYSPSQPGYSPSSTSQYTP 345
YSPSSP YSP SP ++ SP YSP+SP +S S YSP+ PGYS SS S Y+P
Sbjct: 1538 YSPSSPPYSPRSPGFDYAASPSYSPASPSYSAASPRYSPTSPGYSASSPS-YSP 1590
Score = 59.3 bits (142), Expect = 2e-07
Identities = 37/71 (52%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSPSSP SP S YSPS P YS
Sbjct: 1698 PSYSPTSPSYSPTSPSCSPTSPSYSPTSPSYSPTSPSYSPSSPSCSPASPTYSPSSPSYS 1757
Query: 371 PSSTSQYTPQT 339
PSS S Y+P +
Sbjct: 1758 PSSPS-YSPSS 1767
Score = 56.6 bits (135), Expect = 1e-06
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 9/66 (13%)
Frame = -3
Query: 515 PNISIYSP--------SSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSS 363
P+ YSP +SP+YSP+SP S SP YSP+SP +S S+ YSP+ P YSP+S
Sbjct: 1540 PSSPPYSPRSPGFDYAASPSYSPASPSYSAASPRYSPTSPGYSASSPSYSPTSPSYSPTS 1599
Query: 362 TSQYTP 345
S Y+P
Sbjct: 1600 PS-YSP 1604
Score = 56.2 bits (134), Expect = 2e-06
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1586 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPGYSPTSPSYSPTSPRYS 1645
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1646 PTSPS-YSP 1653
[13][TOP]
>UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata
RepID=Q9AXN0_9RHOD
Length = 1746
Score = 73.6 bits (179), Expect(2) = 3e-15
Identities = 38/60 (63%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
P+ YSPSSP YSPSSP+ S SP YSPSSPQ+SPS+ YSPS P YSPSS + Y+P +
Sbjct: 1681 PSSPHYSPSSPQYSPSSPHYSPSSPHYSPSSPQYSPSSPQYSPSSPAYSPSSPA-YSPSS 1739
Score = 32.0 bits (71), Expect(2) = 3e-15
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1637 TSPTYSPTSPTYSPTSP 1653
Score = 67.8 bits (164), Expect(2) = 5e-14
Identities = 36/70 (51%), Positives = 43/70 (61%), Gaps = 11/70 (15%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-----------GYSPSQPGYSP 369
P YSP+SPTYSP+SP S SP YSP+SP +SPS+ YSPS P YSP
Sbjct: 1629 PTSPAYSPTSPTYSPTSPTYSPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPHYSP 1688
Query: 368 SSTSQYTPQT 339
SS QY+P +
Sbjct: 1689 SS-PQYSPSS 1697
Score = 33.5 bits (75), Expect(2) = 5e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1609 TSPSYSPTSPSYSPTSP 1625
Score = 68.6 bits (166), Expect(2) = 2e-13
Identities = 36/55 (65%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
YSPSSP YSPSSP S SP YSPSSP +SPS+ YSPS P YSPSS + Y+P +
Sbjct: 1679 YSPSSPHYSPSSPQYSPSSPHYSPSSPHYSPSSPQYSPSSPQYSPSSPA-YSPSS 1732
Score = 66.6 bits (161), Expect(2) = 2e-13
Identities = 38/70 (54%), Positives = 45/70 (64%), Gaps = 11/70 (15%)
Frame = -3
Query: 515 PNISIYSPSSP----------TYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSP 369
P +YSPSSP +YSPSSP+ S SP YSPSSP +SPS+ YSPS P YSP
Sbjct: 1657 PTSPMYSPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHYSPSSPHYSPSSPQYSP 1716
Query: 368 SSTSQYTPQT 339
SS QY+P +
Sbjct: 1717 SS-PQYSPSS 1725
Score = 33.1 bits (74), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1602 TSPTYSPTSPSYSPTSP 1618
Score = 31.2 bits (69), Expect(2) = 2e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1623 TSPAYSPTSPAYSPTSP 1639
Score = 65.1 bits (157), Expect(2) = 7e-13
Identities = 40/70 (57%), Positives = 45/70 (64%), Gaps = 11/70 (15%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNS-----GVS-----PDYSPSSPQFSPST-GYSPSQPGYSP 369
P YSP+SP YSPSSP S GVS P YSPSSPQ+SPS+ YSPS P YSP
Sbjct: 1650 PTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHYSPSSPHYSP 1709
Query: 368 SSTSQYTPQT 339
SS QY+P +
Sbjct: 1710 SS-PQYSPSS 1718
Score = 32.3 bits (72), Expect(2) = 7e-13
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P+YSPTSP
Sbjct: 1616 TSPSYSPTSPAYSPTSP 1632
Score = 65.5 bits (158), Expect(2) = 6e-10
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SPTYSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1599 YSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTSPT-YSP 1650
Score = 21.9 bits (45), Expect(2) = 6e-10
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP P YSPTSP
Sbjct: 1588 SSPGGVAASPGYSPTSP 1604
Score = 63.5 bits (153), Expect = 1e-08
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1601 PTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTSPTYSPTSPT-YSP 1657
Score = 54.7 bits (130), Expect(2) = 2e-08
Identities = 27/43 (62%), Positives = 30/43 (69%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPS 387
P+ YSPSSP YSPSSP S SP YSPSSP +SPS+ PS
Sbjct: 1702 PSSPHYSPSSPQYSPSSPQYSPSSPAYSPSSPAYSPSSPAHPS 1744
Score = 27.3 bits (59), Expect(2) = 2e-08
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS + P YSP+SP
Sbjct: 1682 SSPHYSPSSPQYSPSSP 1698
Score = 57.0 bits (136), Expect = 9e-07
Identities = 28/50 (56%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = -3
Query: 491 SSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1595 ASPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPT-YSP 1643
[14][TOP]
>UniRef100_A7S8F9 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7S8F9_NEMVE
Length = 1929
Score = 71.6 bits (174), Expect(2) = 4e-15
Identities = 36/60 (60%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSPS P YSPSS S Y+PQ+
Sbjct: 1722 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPS-YSPQS 1780
Score = 33.5 bits (75), Expect(2) = 4e-15
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1667 TSPSYSPTSPSYSPTSP 1683
Score = 69.7 bits (169), Expect(2) = 1e-14
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SPS+ YSPS P YSP S S +P +
Sbjct: 1729 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSYASPSS 1788
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1674 TSPSYSPTSPSYSPTSP 1690
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSPSSP +SPS+ YSP P Y+ S+ +Y+P
Sbjct: 1736 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSYASPSSPKYSP 1793
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1681 TSPSYSPTSPSYSPTSP 1697
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1757
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1639 TSPSYSPTSPSYSPTSP 1655
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1646 TSPSYSPTSPSYSPTSP 1662
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1653 TSPSYSPTSPSYSPTSP 1669
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/62 (53%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Frame = -3
Query: 527 SIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQY 351
S P+ YSP+SP+YSP+SP S SP+YSP+SP +SPS+ YSP+ P Y+P+S S Y
Sbjct: 1782 SYASPSSPKYSPASPSYSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPS-Y 1840
Query: 350 TP 345
+P
Sbjct: 1841 SP 1842
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1730 TSPSYSPTSPSYSPTSP 1746
Score = 66.6 bits (161), Expect(2) = 3e-13
Identities = 33/55 (60%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
YSP+SP+YSPSSP S SP Y+P+SPQ+SP S YSP+ P YSP +T YTP +
Sbjct: 1840 YSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPASPNYSP-TTPSYTPMS 1893
Score = 32.0 bits (71), Expect(2) = 3e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS PSYSP+SP
Sbjct: 1808 TSPNYSPASPSYSPSSP 1824
Score = 67.0 bits (162), Expect(2) = 3e-12
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1638 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1694
Score = 28.5 bits (62), Expect(2) = 3e-12
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P YSP+SP
Sbjct: 1610 SPSYSPTSPGYSPSSP 1625
Score = 61.2 bits (147), Expect(2) = 4e-12
Identities = 33/59 (55%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQF-SPST-GYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSPSSP S SP YSP SP + SPS+ YSP+ P YSP+S +Y+P
Sbjct: 1750 PTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSYASPSSPKYSPASPSYSPTS-PKYSP 1807
Score = 33.5 bits (75), Expect(2) = 4e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1695 TSPSYSPTSPSYSPTSP 1711
Score = 63.9 bits (154), Expect(2) = 8e-12
Identities = 31/58 (53%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P+ YSP+SP+Y+P+SP S SP YSPSSP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1821 PSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTS-PKYSP 1877
Score = 30.0 bits (66), Expect(2) = 8e-12
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSP SP
Sbjct: 1801 TSPKYSPTSPNYSPASP 1817
Score = 66.2 bits (160), Expect(2) = 1e-11
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1629 YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1680
Score = 26.9 bits (58), Expect(2) = 1e-11
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+ S PSYSPTSP
Sbjct: 1602 SSPSMSPASPSYSPTSP 1618
Score = 58.9 bits (141), Expect(2) = 2e-11
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSPSS S Y+P
Sbjct: 1800 PTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPS--YSPASPSYSPSSPS-YSP 1856
Query: 344 QT 339
+
Sbjct: 1857 SS 1858
Score = 33.5 bits (75), Expect(2) = 2e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1744 TSPSYSPTSPSYSPTSP 1760
Score = 70.1 bits (170), Expect = 1e-10
Identities = 38/65 (58%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN YSP+SP+YSPSSP S SP Y+P+SP +SP S YSPS P YSPSS
Sbjct: 1803 PKYSPTSPN---YSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSS- 1858
Query: 359 SQYTP 345
+YTP
Sbjct: 1859 PRYTP 1863
Score = 66.2 bits (160), Expect = 1e-09
Identities = 33/55 (60%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQF---SPSTGYSPSQPGYSPSSTSQYTP 345
YSPSSP + PSSP S SP YSP+SP + SPS+GYSP+ P YSP+S S Y+P
Sbjct: 1592 YSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPS-YSP 1645
Score = 62.4 bits (150), Expect(2) = 2e-09
Identities = 33/55 (60%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
Frame = -3
Query: 500 YSPSSPT--YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSPSSP+ YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1620 YSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 23.5 bits (49), Expect(2) = 2e-09
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS + P++ P+SP
Sbjct: 1589 SPGYSPSSPAFMPSSP 1604
Score = 62.8 bits (151), Expect = 2e-08
Identities = 36/67 (53%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYN--SGVSPDYSPSSPQFSP-STGYSPSQPGYSPS 366
P +S P+ YSP+SP YSPSSP + S SP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1604 PSMSPASPS---YSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660
Query: 365 STSQYTP 345
S S Y+P
Sbjct: 1661 SPS-YSP 1666
Score = 58.9 bits (141), Expect = 2e-07
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPD--YSPSSPQFSP-STGYSPSQPGYSPS 366
P P+ SP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1594 PSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPT 1653
Query: 365 STSQYTP 345
S S Y+P
Sbjct: 1654 SPS-YSP 1659
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1697 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1756
Query: 371 PSSTSQYTPQT 339
P+S S Y+P +
Sbjct: 1757 PTSPS-YSPSS 1766
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1634 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1693
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1694 PTSPS-YSP 1701
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1662 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1721
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1722 PTSPS-YSP 1729
Score = 48.5 bits (114), Expect(2) = 7e-07
Identities = 19/40 (47%), Positives = 30/40 (75%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 396
P+ Y+P+SP YSP+SP S SP+YSP++P ++P +G+
Sbjct: 1856 PSSPRYTPTSPQYSPTSPKYSPASPNYSPTTPSYTPMSGH 1895
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T PSY+P SP
Sbjct: 1822 SSPKYSPTSPSYTPASP 1838
Score = 55.1 bits (131), Expect = 3e-06
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP--GYSPSSTSQYTP 345
P I + +SP YSPSSP SP SP+SP +SP S GYSPS P GYSP+S S Y+P
Sbjct: 1580 PYIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPS-YSP 1638
[15][TOP]
>UniRef100_Q6CBQ3 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CBQ3_YARLI
Length = 1750
Score = 71.6 bits (174), Expect(2) = 4e-15
Identities = 36/69 (52%), Positives = 48/69 (69%), Gaps = 2/69 (2%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQ 342
P YSP+SP+YSPSSP +N+G S YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1682 PTSPSYSPTSPSYSPSSPKFNAGASTSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPG 1740
Query: 341 TNDKDERGK 315
+ D ++ K
Sbjct: 1741 SGDSKDKEK 1749
Score = 33.5 bits (75), Expect(2) = 4e-15
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1629 TSPSYSPTSPSYSPTSP 1645
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S +P
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSYSPTSP 1671
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 34/59 (57%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS--PSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSPSSP+F+ ST YSP+ P YSP+S S Y+P
Sbjct: 1668 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKFNAGASTSYSPTSPSYSPTSPS-YSP 1725
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1601 TSPSYSPTSPSYSPTSP 1617
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1615 TSPSYSPTSPSYSPTSP 1631
Score = 67.4 bits (163), Expect(2) = 6e-12
Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSPSSP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1591 YSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1642
Score = 26.9 bits (58), Expect(2) = 6e-12
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP ++ T PSYSP+SP
Sbjct: 1551 SPGFAATSPSYSPSSP 1566
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1593 PSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1649
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP ++ T PSYSP+SP
Sbjct: 1580 SSPAFAATSPSYSPSSP 1596
Score = 63.2 bits (152), Expect = 1e-08
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ ++ +SP+YSPSSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1579 PSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1635
Score = 60.8 bits (146), Expect = 6e-08
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 7/71 (9%)
Frame = -3
Query: 536 PDISIVFPNISIYSP------SSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPG 378
P + P+ S SP +SP++SPSSP + SP YSPSSP +SP S YSP+ P
Sbjct: 1552 PGFAATSPSYSPSSPGMGLGAASPSFSPSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPS 1611
Query: 377 YSPSSTSQYTP 345
YSP+S S Y+P
Sbjct: 1612 YSPTSPS-YSP 1621
Score = 58.5 bits (140), Expect = 3e-07
Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Frame = -3
Query: 536 PDISIVFPNISIYSPS-SPT-YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS 366
P S P+ S SPS SPT YSP+SP S SP YSP+SP +SP S YSPS P ++
Sbjct: 1645 PSYSPTSPSYSPTSPSYSPTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKFNAG 1704
Query: 365 STSQYTP 345
+++ Y+P
Sbjct: 1705 ASTSYSP 1711
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1596 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1655
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1656 PTSPS-YSP 1663
Score = 57.0 bits (136), Expect = 9e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1589 PSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1648
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1649 PTSPS-YSP 1656
[16][TOP]
>UniRef100_UPI00019270BB PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 1 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270BB
Length = 2041
Score = 71.2 bits (173), Expect(2) = 5e-15
Identities = 35/58 (60%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P IYSP+SP+YSP+SP S SP YSP+SP++SP S YSP+ P YSPSS QY+P
Sbjct: 1728 PTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSS-PQYSP 1784
Score = 33.5 bits (75), Expect(2) = 5e-15
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1673 TSPSYSPTSPSYSPTSP 1689
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 36/58 (62%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSPSSPQ+SP S YSP P YSPSS S Y+P
Sbjct: 1749 PTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPS-YSP 1805
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1694 TSPSYSPTSPSYSPTSP 1710
Score = 68.9 bits (167), Expect(2) = 2e-14
Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP SP+YSPSSP S SP YSP+SP++SP S YSP+ P YSPSS S Y+P +
Sbjct: 1784 PTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPS-YSPSS 1842
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1736 TSPSYSPTSPSYSPTSP 1752
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1672 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1728
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1652 TSPSYSPTSPSYSPTSP 1668
Score = 68.2 bits (165), Expect(2) = 1e-13
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
P IYSP+SP YSP+S S SP+YSPSSP++SP+T YSP+ P YSP+S + Y+P T
Sbjct: 1910 PTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPT-YSPST 1968
Score = 67.0 bits (162), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1707
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1714 PTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPS-YSP 1770
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1659 TSPSYSPTSPSYSPTSP 1675
Score = 33.1 bits (74), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1631 TSPGYSPTSPSYSPTSP 1647
Score = 32.0 bits (71), Expect(2) = 1e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1855 TSPTYSPTSPAYSPTSP 1871
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP++ YSP+ P YSP+S S Y+P
Sbjct: 1693 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPS-YSP 1749
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1666 TSPSYSPTSPSYSPTSP 1682
Score = 67.4 bits (163), Expect(2) = 3e-13
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP+YSPSSP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1826 PTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPA-YSP 1882
Score = 31.6 bits (70), Expect(2) = 3e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1806 TSPKYSPTSPKYSPTSP 1822
Score = 65.1 bits (157), Expect(2) = 3e-13
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S +Y+P
Sbjct: 1770 PTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTS-PKYSP 1826
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1715 TSPSYSPTSPSYSPTSP 1731
Score = 65.5 bits (158), Expect(2) = 9e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP+SP S SP YSP+SP +SP S YSP+ P YSP+S +Y+P
Sbjct: 1847 PTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTS-PKYSP 1903
Score = 65.1 bits (157), Expect(2) = 9e-13
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSPSSP S SP+YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1819 PTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPA-YSP 1875
Score = 32.0 bits (71), Expect(2) = 9e-13
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSP+SP
Sbjct: 1764 TSPSYSPTSPSYSPSSP 1780
Score = 31.6 bits (70), Expect(2) = 9e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1813 TSPKYSPTSPKYSPTSP 1829
Score = 63.5 bits (153), Expect(2) = 1e-12
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1812 PTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPA-YSP 1868
Score = 33.1 bits (74), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1757 TSPKYSPTSPSYSPTSP 1773
Score = 71.6 bits (174), Expect = 4e-11
Identities = 38/71 (53%), Positives = 45/71 (63%), Gaps = 7/71 (9%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS- 363
P + P YSP+SP YSP+SP S SP YSP+SP +SP STGYSP+ P YSPSS
Sbjct: 1882 PTSPVYSPTSPAYSPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSP 1941
Query: 362 -----TSQYTP 345
T QY+P
Sbjct: 1942 KYSPTTPQYSP 1952
Score = 67.0 bits (162), Expect(2) = 5e-11
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P +YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1623 PTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1679
Score = 57.8 bits (138), Expect(2) = 5e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSPSSP S SP YSP SP SPS YSP+ P YSP+S +Y+P
Sbjct: 1763 PTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPS--YSPTSPKYSPTS-PKYSP 1819
Score = 33.5 bits (75), Expect(2) = 5e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1708 TSPSYSPTSPSYSPTSP 1724
Score = 24.3 bits (51), Expect(2) = 5e-11
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP S + P YSPTSP
Sbjct: 1611 SPAMSPSSPGYSPTSP 1626
Score = 57.4 bits (137), Expect(2) = 6e-11
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 5/62 (8%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
P YSPSSP+YSP SP SP YSP+SP++SP S YSPS P YSPSS + Y
Sbjct: 1791 PQSPSYSPSSPSYSPTSPKYSP----TSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPN-Y 1845
Query: 350 TP 345
+P
Sbjct: 1846 SP 1847
Score = 33.5 bits (75), Expect(2) = 6e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1743 TSPSYSPTSPSYSPTSP 1759
Score = 69.7 bits (169), Expect = 1e-10
Identities = 36/67 (53%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P I P YSP+SP+YSP+SP S SP YSP+SP +SP S YSPS P YSP+S
Sbjct: 1728 PTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSP 1787
Query: 359 SQYTPQT 339
+ Y+PQ+
Sbjct: 1788 A-YSPQS 1793
Score = 56.6 bits (135), Expect(2) = 4e-10
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 9/66 (13%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP--------QFSP-STGYSPSQPGYSPSS 363
P+ YSP++P YSP+SP S SP YSPS+P +SP YSP P YSP
Sbjct: 1938 PSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSPLEPDYSPGTPTYSPDG 1997
Query: 362 TSQYTP 345
T Y+P
Sbjct: 1998 TPTYSP 2003
Score = 54.7 bits (130), Expect(2) = 4e-10
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 7/64 (10%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP---GYSPS---STS 357
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P SPS ++
Sbjct: 1700 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSP 1759
Query: 356 QYTP 345
+Y+P
Sbjct: 1760 KYSP 1763
Score = 33.5 bits (75), Expect(2) = 4e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1680 TSPSYSPTSPSYSPTSP 1696
Score = 31.6 bits (70), Expect(2) = 4e-10
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1897 TSPKYSPTSPKYSPTSP 1913
Score = 66.6 bits (161), Expect = 1e-09
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P + P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1623 PTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682
Query: 359 SQYTP 345
S Y+P
Sbjct: 1683 S-YSP 1686
Score = 65.5 bits (158), Expect = 3e-09
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P + P+ YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1609 PQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSP 1668
Query: 359 SQYTP 345
S Y+P
Sbjct: 1669 S-YSP 1672
Score = 54.7 bits (130), Expect(2) = 3e-09
Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSST 360
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1637 PTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1696
Query: 359 SQYTP 345
S Y+P
Sbjct: 1697 S-YSP 1700
Score = 30.4 bits (67), Expect(2) = 3e-09
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1624 TSPLYSPTSPGYSPTSP 1640
Score = 63.9 bits (154), Expect = 7e-09
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
PN ++P SP SPSSP S SP YSP+SP +SP S YSP+ PGYSP+S S Y+P
Sbjct: 1602 PNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPS-YSP 1658
Score = 51.2 bits (121), Expect(2) = 2e-08
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 10/67 (14%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVS--------PDYSPSSPQFSP--STGYSPSQPGYSPS 366
P YSP+SPTYSPS+P + V PDYSP +P +SP + YSP G+S +
Sbjct: 1952 PTSPKYSPASPTYSPSTPTDKSVGSINYSPLEPDYSPGTPTYSPDGTPTYSPDGRGFSGT 2011
Query: 365 STSQYTP 345
+ +P
Sbjct: 2012 AAKNISP 2018
Score = 30.8 bits (68), Expect(2) = 2e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1904 TSPKYSPTSPIYSPTSP 1920
Score = 62.0 bits (149), Expect = 3e-08
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P +++ P+ YSP+SP ++P SP S SP YSP+SP +SP S GYSP+ P YSP+S
Sbjct: 1591 PSRNVMSPS---YSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSP 1647
Query: 359 SQYTP 345
Y+P
Sbjct: 1648 G-YSP 1651
Score = 60.5 bits (145), Expect = 8e-08
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P I P YSP+S YSP+SP S SP YSP++PQ+SP S YSP+ P YSPS+
Sbjct: 1910 PTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPST 1968
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1654 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1713
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1714 PTSPS-YSP 1721
Score = 57.4 bits (137), Expect = 7e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1647 PGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1706
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1707 PTSPS-YSP 1714
Score = 56.6 bits (135), Expect = 1e-06
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1689 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYS 1748
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1749 PTSPS-YSP 1756
[17][TOP]
>UniRef100_UPI00019270E9 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 2 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270E9
Length = 2014
Score = 71.2 bits (173), Expect(2) = 5e-15
Identities = 35/58 (60%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P IYSP+SP+YSP+SP S SP YSP+SP++SP S YSP+ P YSPSS QY+P
Sbjct: 1701 PTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSS-PQYSP 1757
Score = 33.5 bits (75), Expect(2) = 5e-15
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1646 TSPSYSPTSPSYSPTSP 1662
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 36/58 (62%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSPSSPQ+SP S YSP P YSPSS S Y+P
Sbjct: 1722 PTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPS-YSP 1778
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1667 TSPSYSPTSPSYSPTSP 1683
Score = 68.9 bits (167), Expect(2) = 2e-14
Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP SP+YSPSSP S SP YSP+SP++SP S YSP+ P YSPSS S Y+P +
Sbjct: 1757 PTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPS-YSPSS 1815
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1709 TSPSYSPTSPSYSPTSP 1725
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1701
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1625 TSPSYSPTSPSYSPTSP 1641
Score = 68.2 bits (165), Expect(2) = 1e-13
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
P IYSP+SP YSP+S S SP+YSPSSP++SP+T YSP+ P YSP+S + Y+P T
Sbjct: 1883 PTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPT-YSPST 1941
Score = 67.0 bits (162), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1624 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1680
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1687 PTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPS-YSP 1743
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1632 TSPSYSPTSPSYSPTSP 1648
Score = 33.1 bits (74), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1604 TSPGYSPTSPSYSPTSP 1620
Score = 32.0 bits (71), Expect(2) = 1e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1828 TSPTYSPTSPAYSPTSP 1844
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP++ YSP+ P YSP+S S Y+P
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPS-YSP 1722
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1639 TSPSYSPTSPSYSPTSP 1655
Score = 67.4 bits (163), Expect(2) = 3e-13
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP+YSPSSP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1799 PTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPA-YSP 1855
Score = 31.6 bits (70), Expect(2) = 3e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1779 TSPKYSPTSPKYSPTSP 1795
Score = 65.1 bits (157), Expect(2) = 3e-13
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S +Y+P
Sbjct: 1743 PTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTS-PKYSP 1799
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1688 TSPSYSPTSPSYSPTSP 1704
Score = 65.5 bits (158), Expect(2) = 9e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP+SP S SP YSP+SP +SP S YSP+ P YSP+S +Y+P
Sbjct: 1820 PTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTS-PKYSP 1876
Score = 65.1 bits (157), Expect(2) = 9e-13
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSPSSP S SP+YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1792 PTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPA-YSP 1848
Score = 32.0 bits (71), Expect(2) = 9e-13
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSP+SP
Sbjct: 1737 TSPSYSPTSPSYSPSSP 1753
Score = 31.6 bits (70), Expect(2) = 9e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1786 TSPKYSPTSPKYSPTSP 1802
Score = 63.5 bits (153), Expect(2) = 1e-12
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1785 PTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPA-YSP 1841
Score = 33.1 bits (74), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1730 TSPKYSPTSPSYSPTSP 1746
Score = 71.6 bits (174), Expect = 4e-11
Identities = 38/71 (53%), Positives = 45/71 (63%), Gaps = 7/71 (9%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS- 363
P + P YSP+SP YSP+SP S SP YSP+SP +SP STGYSP+ P YSPSS
Sbjct: 1855 PTSPVYSPTSPAYSPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSP 1914
Query: 362 -----TSQYTP 345
T QY+P
Sbjct: 1915 KYSPTTPQYSP 1925
Score = 67.0 bits (162), Expect(2) = 5e-11
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P +YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1596 PTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1652
Score = 57.8 bits (138), Expect(2) = 5e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSPSSP S SP YSP SP SPS YSP+ P YSP+S +Y+P
Sbjct: 1736 PTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPS--YSPTSPKYSPTS-PKYSP 1792
Score = 33.5 bits (75), Expect(2) = 5e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1681 TSPSYSPTSPSYSPTSP 1697
Score = 24.3 bits (51), Expect(2) = 5e-11
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP S + P YSPTSP
Sbjct: 1584 SPAMSPSSPGYSPTSP 1599
Score = 57.4 bits (137), Expect(2) = 6e-11
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 5/62 (8%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
P YSPSSP+YSP SP SP YSP+SP++SP S YSPS P YSPSS + Y
Sbjct: 1764 PQSPSYSPSSPSYSPTSPKYSP----TSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPN-Y 1818
Query: 350 TP 345
+P
Sbjct: 1819 SP 1820
Score = 33.5 bits (75), Expect(2) = 6e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1716 TSPSYSPTSPSYSPTSP 1732
Score = 69.7 bits (169), Expect = 1e-10
Identities = 36/67 (53%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P I P YSP+SP+YSP+SP S SP YSP+SP +SP S YSPS P YSP+S
Sbjct: 1701 PTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSP 1760
Query: 359 SQYTPQT 339
+ Y+PQ+
Sbjct: 1761 A-YSPQS 1766
Score = 56.6 bits (135), Expect(2) = 4e-10
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 9/66 (13%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP--------QFSP-STGYSPSQPGYSPSS 363
P+ YSP++P YSP+SP S SP YSPS+P +SP YSP P YSP
Sbjct: 1911 PSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSPLEPDYSPGTPTYSPDG 1970
Query: 362 TSQYTP 345
T Y+P
Sbjct: 1971 TPTYSP 1976
Score = 54.7 bits (130), Expect(2) = 4e-10
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 7/64 (10%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP---GYSPS---STS 357
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P SPS ++
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSP 1732
Query: 356 QYTP 345
+Y+P
Sbjct: 1733 KYSP 1736
Score = 33.5 bits (75), Expect(2) = 4e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1653 TSPSYSPTSPSYSPTSP 1669
Score = 31.6 bits (70), Expect(2) = 4e-10
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1870 TSPKYSPTSPKYSPTSP 1886
Score = 66.6 bits (161), Expect = 1e-09
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P + P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1596 PTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1655
Query: 359 SQYTP 345
S Y+P
Sbjct: 1656 S-YSP 1659
Score = 65.5 bits (158), Expect = 3e-09
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P + P+ YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1582 PQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSP 1641
Query: 359 SQYTP 345
S Y+P
Sbjct: 1642 S-YSP 1645
Score = 54.7 bits (130), Expect(2) = 3e-09
Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSST 360
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1610 PTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1669
Query: 359 SQYTP 345
S Y+P
Sbjct: 1670 S-YSP 1673
Score = 30.4 bits (67), Expect(2) = 3e-09
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1597 TSPLYSPTSPGYSPTSP 1613
Score = 63.9 bits (154), Expect = 7e-09
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
PN ++P SP SPSSP S SP YSP+SP +SP S YSP+ PGYSP+S S Y+P
Sbjct: 1575 PNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPS-YSP 1631
Score = 62.4 bits (150), Expect = 2e-08
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = -3
Query: 512 NISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+I YSP+SP ++P SP S SP YSP+SP +SP S GYSP+ P YSP+S Y+P
Sbjct: 1569 SIPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPG-YSP 1624
Score = 51.2 bits (121), Expect(2) = 2e-08
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 10/67 (14%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVS--------PDYSPSSPQFSP--STGYSPSQPGYSPS 366
P YSP+SPTYSPS+P + V PDYSP +P +SP + YSP G+S +
Sbjct: 1925 PTSPKYSPASPTYSPSTPTDKSVGSINYSPLEPDYSPGTPTYSPDGTPTYSPDGRGFSGT 1984
Query: 365 STSQYTP 345
+ +P
Sbjct: 1985 AAKNISP 1991
Score = 30.8 bits (68), Expect(2) = 2e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1877 TSPKYSPTSPIYSPTSP 1893
Score = 60.5 bits (145), Expect = 8e-08
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P I P YSP+S YSP+SP S SP YSP++PQ+SP S YSP+ P YSPS+
Sbjct: 1883 PTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPST 1941
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1627 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1686
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1687 PTSPS-YSP 1694
Score = 57.4 bits (137), Expect = 7e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1620 PGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1679
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1680 PTSPS-YSP 1687
Score = 56.6 bits (135), Expect = 1e-06
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1662 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYS 1721
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1722 PTSPS-YSP 1729
[18][TOP]
>UniRef100_A8PU11 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8PU11_BRUMA
Length = 1943
Score = 71.2 bits (173), Expect(2) = 5e-15
Identities = 36/60 (60%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SPTYSP+SP S SP YSPSSP++SP S YSP+ P YSPSS QY+P +
Sbjct: 1783 PTSPAYSPTSPTYSPTSPSYSPASPGYSPSSPRYSPTSPTYSPTSPAYSPSS-PQYSPSS 1841
Score = 33.5 bits (75), Expect(2) = 5e-15
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1735 TSPSYSPTSPSYSPTSP 1751
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 35/58 (60%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP+SP S SP YSP+SP +SP S GYSPS P YSP+S + Y+P
Sbjct: 1769 PTSPAYSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPASPGYSPSSPRYSPTSPT-YSP 1825
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1714 TSPSYSPTSPSYSPTSP 1730
Score = 68.9 bits (167), Expect(2) = 2e-14
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ PGYSPSS +Y+P
Sbjct: 1713 PTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPASPGYSPSS-PRYSP 1769
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1693 TSPSYSPTSPSYSPTSP 1709
Score = 70.1 bits (170), Expect(2) = 3e-14
Identities = 37/60 (61%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP YSPSSP S SP YSP+SP +SPS+ YSPS P YSPSS QYTP +
Sbjct: 1797 PTSPSYSPASPGYSPSSPRYSPTSPTYSPTSPAYSPSSPQYSPSSPQYSPSS-PQYTPSS 1855
Score = 32.0 bits (71), Expect(2) = 3e-14
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1777 TSPTYSPTSPAYSPTSP 1793
Score = 67.8 bits (164), Expect(2) = 5e-14
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ PGYSPSS +Y+P
Sbjct: 1762 PSSPRYSPTSPAYSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPASPGYSPSS-PRYSP 1818
Score = 33.5 bits (75), Expect(2) = 5e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1707 TSPSYSPTSPSYSPTSP 1723
Score = 66.2 bits (160), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSPSSP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1734 PTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPRYSPTSPAYSPTSPTYSPTSPA-YSP 1790
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1700 TSPSYSPTSPSYSPTSP 1716
Score = 67.8 bits (164), Expect(2) = 3e-13
Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 7/66 (10%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-------GYSPSQPGYSPSSTS 357
P YSP+SP YSPSSP S SP YSPSSPQ++PS+ YSP+ P YSPSS
Sbjct: 1818 PTSPTYSPTSPAYSPSSPQYSPSSPQYSPSSPQYTPSSPAGDASPAYSPTSPQYSPSS-P 1876
Query: 356 QYTPQT 339
+Y+P +
Sbjct: 1877 RYSPSS 1882
Score = 31.2 bits (69), Expect(2) = 3e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1770 TSPAYSPTSPTYSPTSP 1786
Score = 67.0 bits (162), Expect(2) = 7e-13
Identities = 36/60 (60%), Positives = 41/60 (68%), Gaps = 6/60 (10%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS------TGYSPSQPGYSPSSTSQYTPQT 339
YSP+SP YSPSSP S SP YSP+SPQ+SPS T YS S P YSPSS QY+P +
Sbjct: 1864 YSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPSSPGGAGTSYSRSSPQYSPSS-PQYSPSS 1922
Score = 30.4 bits (67), Expect(2) = 7e-13
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T P+YSPTSP
Sbjct: 1812 SSPRYSPTSPTYSPTSP 1828
Score = 68.6 bits (166), Expect(2) = 1e-12
Identities = 38/63 (60%), Positives = 44/63 (69%), Gaps = 6/63 (9%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVS-----PDYSPSSPQFSPST-GYSPSQPGYSPSSTSQ 354
P+ YSP+SP YSPSSP +G S P YSPSSPQ+SPS+ YSPS P YSPSS Q
Sbjct: 1880 PSSPQYSPTSPQYSPSSPGGAGTSYSRSSPQYSPSSPQYSPSSPQYSPSSPQYSPSS-PQ 1938
Query: 353 YTP 345
Y+P
Sbjct: 1939 YSP 1941
Score = 28.1 bits (61), Expect(2) = 1e-12
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS + P YSP+SP
Sbjct: 1867 TSPQYSPSSPRYSPSSP 1883
Score = 65.1 bits (157), Expect(2) = 3e-12
Identities = 39/72 (54%), Positives = 43/72 (59%), Gaps = 13/72 (18%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSP------------SSPQFSPST-GYSPSQPGY 375
P YSPSSP YSPSSP S SP YSP SSPQ+SPS+ YSPS P Y
Sbjct: 1866 PTSPQYSPSSPRYSPSSPQYSPTSPQYSPSSPGGAGTSYSRSSPQYSPSSPQYSPSSPQY 1925
Query: 374 SPSSTSQYTPQT 339
SPSS QY+P +
Sbjct: 1926 SPSS-PQYSPSS 1936
Score = 30.4 bits (67), Expect(2) = 3e-12
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSP+SP
Sbjct: 1819 TSPTYSPTSPAYSPSSP 1835
Score = 69.3 bits (168), Expect(2) = 6e-12
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S GYSP+ P YSP+S S Y+P
Sbjct: 1692 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPS-YSP 1748
Score = 25.0 bits (53), Expect(2) = 6e-12
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP Y P YSPTSP
Sbjct: 1679 SSPAYGVMSPRYSPTSP 1695
Score = 59.3 bits (142), Expect(2) = 8e-11
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 7/65 (10%)
Frame = -3
Query: 515 PNISIYSPSSPT------YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 357
P+ Y+PSSP YSP+SP S SP YSPSSPQ+SP S YSPS PG + +S S
Sbjct: 1846 PSSPQYTPSSPAGDASPAYSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPSSPGGAGTSYS 1905
Query: 356 QYTPQ 342
+ +PQ
Sbjct: 1906 RSSPQ 1910
Score = 31.2 bits (69), Expect(2) = 8e-11
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSP SP
Sbjct: 1791 TSPTYSPTSPSYSPASP 1807
Score = 68.6 bits (166), Expect(2) = 2e-10
Identities = 33/53 (62%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S S Y+P
Sbjct: 1690 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPS-YSP 1741
Score = 20.4 bits (41), Expect(2) = 2e-10
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 526 PSYSPTSP 503
P YSPTSP
Sbjct: 1665 PGYSPTSP 1672
Score = 57.0 bits (136), Expect = 9e-07
Identities = 30/55 (54%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = -3
Query: 506 SIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
S Y SSP Y SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1674 SPYGASSPAYGVMSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1727
Score = 56.2 bits (134), Expect = 2e-06
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1688 PRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYS 1747
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1748 PTSPS-YSP 1755
[19][TOP]
>UniRef100_O96446 DNA-directed RNA polymerase n=1 Tax=Vairimorpha necatrix
RepID=O96446_9MICR
Length = 1605
Score = 70.9 bits (172), Expect(2) = 7e-15
Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P T
Sbjct: 1532 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP-T 1589
Query: 338 NDKDER 321
D DE+
Sbjct: 1590 YDNDEK 1595
Score = 33.5 bits (75), Expect(2) = 7e-15
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1512 TSPSYSPTSPSYSPTSP 1528
Score = 68.9 bits (167), Expect(2) = 7e-14
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1490 PTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1546
Score = 32.0 bits (71), Expect(2) = 7e-14
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1470 TSPTYSPTSPTYSPTSP 1486
Score = 67.0 bits (162), Expect(2) = 3e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1511 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1567
Score = 32.0 bits (71), Expect(2) = 3e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1477 TSPTYSPTSPTYSPTSP 1493
Score = 61.2 bits (147), Expect(2) = 1e-11
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1497 PTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1553
Score = 32.0 bits (71), Expect(2) = 1e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1484 TSPTYSPTSPTYSPTSP 1500
Score = 70.5 bits (171), Expect = 8e-11
Identities = 36/65 (55%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S+ P YSP+SPTYSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1462 PKTSLYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSP 1521
Query: 359 SQYTP 345
S Y+P
Sbjct: 1522 S-YSP 1525
Score = 57.4 bits (137), Expect = 7e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1507 PTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1566
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1567 PTSPS-YSP 1574
[20][TOP]
>UniRef100_UPI000186501C hypothetical protein BRAFLDRAFT_115025 n=1 Tax=Branchiostoma floridae
RepID=UPI000186501C
Length = 1956
Score = 70.5 bits (171), Expect(2) = 8e-15
Identities = 34/59 (57%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQ 342
P YSP+SP+YSP+SP S SP YSPSSP +SP S YSPS P YSPSS + +P+
Sbjct: 1757 PTSPSYSPTSPSYSPASPSYSPTSPSYSPSSPNYSPQSPSYSPSSPSYSPSSPNPSSPK 1815
Score = 33.5 bits (75), Expect(2) = 8e-15
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1702 TSPSYSPTSPSYSPTSP 1718
Score = 68.6 bits (166), Expect(2) = 3e-14
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SPS+ YSP P YSPSS S Y+P +
Sbjct: 1750 PTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPSSPNYSPQSPSYSPSSPS-YSPSS 1808
Score = 33.5 bits (75), Expect(2) = 3e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1695 TSPSYSPTSPSYSPTSP 1711
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1639 TSPSYSPTSPSYSPTSP 1655
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1646 TSPSYSPTSPSYSPTSP 1662
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 32/58 (55%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+Y+P+SP++SP S YSP+ P YSP+S S Y+P
Sbjct: 1722 PTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPS-YSP 1778
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1667 TSPSYSPTSPSYSPTSP 1683
Score = 67.4 bits (163), Expect(2) = 3e-13
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 345
P+ Y+P+SP YSPSSP S SP YSP+SP +SPS+ YSP+ P YSP ST +YTP
Sbjct: 1811 PSSPKYTPTSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSP-STPKYTP 1867
Score = 31.6 bits (70), Expect(2) = 3e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSP SP
Sbjct: 1758 TSPSYSPTSPSYSPASP 1774
Score = 64.7 bits (156), Expect(2) = 4e-13
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P Y+P+S +Y+P
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTS-PKYSP 1757
Score = 33.5 bits (75), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1653 TSPSYSPTSPSYSPTSP 1669
Score = 63.9 bits (154), Expect(2) = 3e-12
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP YSPSSP S SP YSPSS ++SP S YSPS P Y+P+S +Y+P
Sbjct: 1818 PTSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTS-PKYSP 1874
Score = 31.6 bits (70), Expect(2) = 3e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS PSYSPTSP
Sbjct: 1765 TSPSYSPASPSYSPTSP 1781
Score = 60.5 bits (145), Expect(2) = 8e-12
Identities = 35/63 (55%), Positives = 40/63 (63%), Gaps = 6/63 (9%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYS-----PSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSPSSP YSP SP S SP YS PSSP+++P S YSPS P YSPSS +
Sbjct: 1778 PTSPSYSPSSPNYSPQSPSYSPSSPSYSPSSPNPSSPKYTPTSPKYSPSSPKYSPSS-PK 1836
Query: 353 YTP 345
Y+P
Sbjct: 1837 YSP 1839
Score = 33.5 bits (75), Expect(2) = 8e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1723 TSPSYSPTSPSYSPTSP 1739
Score = 63.9 bits (154), Expect(2) = 2e-11
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTY+P+SP S SP Y+P +P++SP S YSP+ P YSP+S S Y+P
Sbjct: 1867 PTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTYSPTSPKGSTYSP 1926
Query: 344 QT 339
T
Sbjct: 1927 TT 1928
Score = 63.5 bits (153), Expect(2) = 2e-11
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQ---FSPST-GYSPSQPGYSPSSTSQYT 348
P Y+P +P YSP+SP S SP YSP+SP+ +SP+T GYSP+ P YSP S
Sbjct: 1888 PTSPSYTPDTPKYSPTSPKYSPTSPTYSPTSPKGSTYSPTTPGYSPASPTYSPESPESRA 1947
Query: 347 PQTNDKDE 324
Q ++DE
Sbjct: 1948 TQEEEEDE 1955
Score = 62.4 bits (150), Expect(2) = 2e-11
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSPSS YSP+SP S +P Y+P+SP++SP S Y+P+ P YSP+S S YTP T
Sbjct: 1839 PTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPS-YTPDT 1897
Score = 30.0 bits (66), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SPNYS PSYSP+SP
Sbjct: 1786 SSPNYSPQSPSYSPSSP 1802
Score = 28.9 bits (63), Expect(2) = 2e-11
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS P+Y+PTSP
Sbjct: 1868 TSPKYSPASPTYTPTSP 1884
Score = 28.5 bits (62), Expect(2) = 2e-11
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS + P YSP+SP
Sbjct: 1819 TSPKYSPSSPKYSPSSP 1835
Score = 58.5 bits (140), Expect(2) = 3e-11
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 8/67 (11%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSP-----STGYSPSQPGYSPSST 360
P YSP+SP+YSP+SP + SP YSP+SP SP S YSP+ P YSPSS
Sbjct: 1729 PTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPSSP 1788
Query: 359 SQYTPQT 339
+ Y+PQ+
Sbjct: 1789 N-YSPQS 1794
Score = 33.5 bits (75), Expect(2) = 3e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1674 TSPSYSPTSPSYSPTSP 1690
Score = 67.0 bits (162), Expect(2) = 5e-11
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1617 PTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 24.3 bits (51), Expect(2) = 5e-11
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS P+Y P SP
Sbjct: 1590 SPSYSPASPAYMPRSP 1605
Score = 61.6 bits (148), Expect(2) = 1e-10
Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ + YSP+SP+YSPS+P + SP YSP+SP ++P S YSP+ P Y+P T +Y+P
Sbjct: 1846 PSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTP-DTPKYSP 1902
Score = 58.9 bits (141), Expect(2) = 1e-10
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1624 PTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1680
Score = 31.2 bits (69), Expect(2) = 1e-10
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T PSYSPTSP
Sbjct: 1612 SPGYSPTSPSYSPTSP 1627
Score = 28.5 bits (62), Expect(2) = 1e-10
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS + P YSPTSP
Sbjct: 1826 SSPKYSPSSPKYSPTSP 1842
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1627 PSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1686
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1687 PTSPS-YSP 1694
Score = 53.9 bits (128), Expect(2) = 6e-10
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP+YSP +SP S SP YSP+SP ++P S YSP+ P YSP+S
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSP 1767
Query: 359 SQYTP 345
S Y+P
Sbjct: 1768 S-YSP 1771
Score = 33.5 bits (75), Expect(2) = 6e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1660 TSPSYSPTSPSYSPTSP 1676
Score = 67.0 bits (162), Expect = 9e-10
Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN Y+P+SP YSP+SP S SP YSP+SP +SP S YSPS P YSP S
Sbjct: 1739 PSYSPTSPN---YTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPSSPNYSPQSP 1795
Query: 359 SQYTPQT 339
S Y+P +
Sbjct: 1796 S-YSPSS 1801
Score = 66.6 bits (161), Expect = 1e-09
Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 60.8 bits (146), Expect = 6e-08
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+P SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1609 TPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 60.8 bits (146), Expect = 6e-08
Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST------GYSPSQPGY 375
P S P+ S P+SP+YSPSSP S SP YSPSSP +SPS+ Y+P+ P Y
Sbjct: 1767 PSYSPASPSYS---PTSPSYSPSSPNYSPQSPSYSPSSPSYSPSSPNPSSPKYTPTSPKY 1823
Query: 374 SPSSTSQYTPQT 339
SPSS +Y+P +
Sbjct: 1824 SPSS-PKYSPSS 1834
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1683 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1742
Query: 371 PSSTSQYTP 345
P+S + YTP
Sbjct: 1743 PTSPN-YTP 1750
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1714
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1715 PTSPS-YSP 1722
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP + SP YSP+SP +SP S YSP+ P YS
Sbjct: 1718 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYS 1777
Query: 371 PSSTSQYTPQT 339
P+S S Y+P +
Sbjct: 1778 PTSPS-YSPSS 1787
[21][TOP]
>UniRef100_UPI0000546D90 PREDICTED: im:7136071 isoform 1 n=1 Tax=Danio rerio
RepID=UPI0000546D90
Length = 1972
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP+Y+P+SP +SP S YSP+ P YSPSS +YTPQ+
Sbjct: 1761 PTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPSS-PRYTPQS 1819
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1706 TSPSYSPTSPSYSPTSP 1722
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1663 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1719
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1636 TSPNYSPTSPSYSPTSP 1652
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + YTP
Sbjct: 1705 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YTP 1761
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1650 TSPSYSPTSPSYSPTSP 1666
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1684 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1740
Score = 65.1 bits (157), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P SP + SP YSPSSP +SP S Y+P+ P YSPSS +YTP
Sbjct: 1803 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSS-PEYTP 1859
Score = 35.4 bits (80), Expect(2) = 9e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1790 TSPNYSPTSPSYSPTSP 1806
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1643 TSPSYSPTSPSYSPTSP 1659
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+Y+P+SP +SP S YSP+ P YSP+S + YTP
Sbjct: 1733 PTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPN-YTP 1789
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1678 TSPSYSPTSPSYSPTSP 1694
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP ++P S YSP+ P YSP+S S Y+P
Sbjct: 1726 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPS-YSP 1782
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1671 TSPSYSPTSPSYSPTSP 1687
Score = 63.9 bits (154), Expect(2) = 4e-13
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--------GYSPSQPGYSPSST 360
P YSP+SP Y+P+SP S SP YSP+SP +SPS+ Y+PS P YSPSS
Sbjct: 1775 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1834
Query: 359 SQYTP 345
S Y+P
Sbjct: 1835 S-YSP 1838
Score = 34.3 bits (77), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ T PSYSPTSP
Sbjct: 1755 TSPNYTPTSPSYSPTSP 1771
Score = 63.9 bits (154), Expect(2) = 7e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P Y+PSSP+YSPSSP S SP Y+P+SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1817 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS-PKYSP 1873
Score = 33.5 bits (75), Expect(2) = 7e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1762 TSPSYSPTSPSYSPTSP 1778
Score = 65.5 bits (158), Expect(2) = 9e-13
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 13/77 (16%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-----------TGYSPSQPGYSP 369
P YSP+SPTY+P+SP S SP YSP+SP++SP+ + YSP+ PGYSP
Sbjct: 1894 PTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSP 1953
Query: 368 SSTSQYTP--QTNDKDE 324
+S + Y+P +D DE
Sbjct: 1954 TSPT-YSPAISPDDSDE 1969
Score = 63.5 bits (153), Expect(2) = 9e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ Y+P SPTY+PSSP S SP YSP+SP+++P S YSPS P Y+P+S +Y+P
Sbjct: 1810 PSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS-PKYSP 1866
Score = 33.5 bits (75), Expect(2) = 9e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1769 TSPSYSPTSPSYSPTSP 1785
Score = 31.6 bits (70), Expect(2) = 9e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1860 TSPKYSPTSPKYSPTSP 1876
Score = 63.2 bits (152), Expect(2) = 2e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1838 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1894
Score = 33.1 bits (74), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ T P+YSPTSP
Sbjct: 1783 TSPNYTPTSPNYSPTSP 1799
Score = 64.3 bits (155), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1887 PTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1946
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1867 TSPKYSPTSPKYSPTSP 1883
Score = 67.0 bits (162), Expect(2) = 3e-12
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1621 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1677
Score = 28.5 bits (62), Expect(2) = 3e-12
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS T P+Y P SP
Sbjct: 1593 SPNYSPTSPAYEPRSP 1608
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1845 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1901
Score = 30.4 bits (67), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS + PSYSPTSP
Sbjct: 1825 SSPSYSPSSPSYSPTSP 1841
Score = 62.4 bits (150), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1873 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTS-PKYSP 1929
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 1839 TSPKYTPTSPSYSPSSP 1855
Score = 58.2 bits (139), Expect(2) = 4e-11
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + SP+YSP+SP SPS YSPS P Y+P S + YTP
Sbjct: 1768 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPS--YSPSSPRYTPQSPT-YTP 1824
Query: 344 QT 339
+
Sbjct: 1825 SS 1826
Score = 33.5 bits (75), Expect(2) = 4e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1713 TSPSYSPTSPSYSPTSP 1729
Score = 58.9 bits (141), Expect(2) = 1e-10
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1628 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1684
Score = 31.2 bits (69), Expect(2) = 1e-10
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T PSYSPTSP
Sbjct: 1616 SPGYSPTSPSYSPTSP 1631
Score = 60.1 bits (144), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1866 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPT-YSP 1922
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P Y+PTSP
Sbjct: 1832 SSPSYSPTSPKYTPTSP 1848
Score = 66.6 bits (161), Expect(2) = 3e-10
Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1670
Score = 21.9 bits (45), Expect(2) = 3e-10
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ P YSPTSP
Sbjct: 1612 YTPQSPGYSPTSP 1624
Score = 54.7 bits (130), Expect(2) = 4e-10
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP+YSP +SP S SP YSP+SP +SP S Y+P+ P YSP+S
Sbjct: 1712 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPTSP 1771
Query: 359 SQYTP 345
S Y+P
Sbjct: 1772 S-YSP 1775
Score = 33.5 bits (75), Expect(2) = 4e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1657 TSPSYSPTSPSYSPTSP 1673
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1631 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1690
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1691 PTSPS-YSP 1698
Score = 63.5 bits (153), Expect = 1e-08
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1612 YTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1663
Score = 51.2 bits (121), Expect(2) = 1e-08
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPD---YSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP GYSP+ P YSP+ + +
Sbjct: 1915 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP------GYSPTSPTYSPAISPDDSD 1968
Query: 344 QTND 333
+ N+
Sbjct: 1969 EENN 1972
Score = 31.6 bits (70), Expect(2) = 1e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1881 TSPTYSPTTPKYSPTSP 1897
Score = 52.4 bits (124), Expect(2) = 1e-07
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 5/62 (8%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQY 351
P+ Y+P+SP YSP SP SP YSP+SP +SP+T YSP+ P YSP+S + Y
Sbjct: 1852 PSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPT-Y 1906
Query: 350 TP 345
TP
Sbjct: 1907 TP 1908
Score = 26.9 bits (58), Expect(2) = 1e-07
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP Y+ + PSYSP+SP
Sbjct: 1819 SPTYTPSSPSYSPSSP 1834
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1659 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1718
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1719 PTSPS-YSP 1726
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1687 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1746
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1747 PTSPS-YSP 1754
Score = 56.6 bits (135), Expect = 1e-06
Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYN--SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP Y P SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1596 YSPTSPAYEPRSPGGGYTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPS-YSP 1649
Score = 54.3 bits (129), Expect = 6e-06
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP + SP YSP+SP +SP S YSP+ P Y+
Sbjct: 1729 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYT 1788
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1789 PTSPN-YSP 1796
[22][TOP]
>UniRef100_UPI0000F2BF12 PREDICTED: similar to RNA polymerase II isoform 1 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF12
Length = 1970
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP + SP+YSP+SP +SP S YSP+ P YSPSS +YTPQ+
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS-PRYTPQS 1815
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1702 TSPSYSPTSPSYSPTSP 1718
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1632 TSPNYSPTSPSYSPTSP 1648
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + YTP
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPN-YTP 1757
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1646 TSPSYSPTSPSYSPTSP 1662
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 65.1 bits (157), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P SP + SP YSPSSP +SP S Y+P+ P YSPSS +YTP
Sbjct: 1799 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSS-PEYTP 1855
Score = 35.4 bits (80), Expect(2) = 9e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1779 TSPNYSPTSPSYSPTSP 1795
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1639 TSPSYSPTSPSYSPTSP 1655
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP ++P S YSP+ P YSP+S + YTP
Sbjct: 1722 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPN-YTP 1778
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1667 TSPSYSPTSPSYSPTSP 1683
Score = 63.5 bits (153), Expect(2) = 6e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ Y+P SPTY+PSSP S SP YSP+SP+++P S YSPS P Y+P+S +Y+P
Sbjct: 1806 PSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS-PKYSP 1862
Score = 34.3 bits (77), Expect(2) = 6e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ T PSYSPTSP
Sbjct: 1751 TSPNYTPTSPSYSPTSP 1767
Score = 63.9 bits (154), Expect(2) = 7e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P Y+PSSP+YSPSSP S SP Y+P+SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1813 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869
Score = 33.5 bits (75), Expect(2) = 7e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1758 TSPSYSPTSPSYSPTSP 1774
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1834 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1890
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1786 TSPSYSPTSPSYSPTSP 1802
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1883 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1942
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1856 TSPKYSPTSPKYSPTSP 1872
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1590 SPSYSPTSPAYEPRSP 1605
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1841 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1897
Score = 30.4 bits (67), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS + PSYSPTSP
Sbjct: 1821 SSPSYSPSSPSYSPTSP 1837
Score = 62.0 bits (149), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1869 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1925
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 1835 TSPKYTPTSPSYSPSSP 1851
Score = 57.4 bits (137), Expect(2) = 6e-11
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP Y+P+SP S SP YSP+SP SPS YSPS P Y+P S + YTP
Sbjct: 1764 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPSSPRYTPQSPT-YTP 1820
Query: 344 QT 339
+
Sbjct: 1821 SS 1822
Score = 33.5 bits (75), Expect(2) = 6e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1709 TSPSYSPTSPSYSPTSP 1725
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1680
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1612 SPSYSPTSPSYSPTSP 1627
Score = 59.7 bits (143), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1862 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1918
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P Y+PTSP
Sbjct: 1828 SSPSYSPTSPKYTPTSP 1844
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1627 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1686
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1687 PTSPS-YSP 1694
Score = 65.1 bits (157), Expect = 3e-09
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN YSP+SP Y+P+SP S SP YSP+SP ++P S YSP+ P YSP+S
Sbjct: 1739 PSYSPTSPN---YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Query: 359 SQYTP 345
S Y+P
Sbjct: 1796 S-YSP 1799
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 64.7 bits (156), Expect = 4e-09
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + PN S P+SP+YSP+SP S SP YSPSSP+++P S Y+PS P YSPSS
Sbjct: 1774 PNYTPTSPNYS---PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Query: 359 SQYTP 345
S Y+P
Sbjct: 1831 S-YSP 1834
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1617 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1673
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1608 YTPQSPSYSPTSP 1620
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1897 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1951
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1911 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1968
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1863 TSPKYSPTSPKYSPTSP 1879
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1714
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1715 PTSPS-YSP 1722
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1683 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1742
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1743 PTSPN-YSP 1750
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP+Y+P+SP +SP S YSP+ P Y+
Sbjct: 1718 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 1777
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1778 PTSPN-YSP 1785
[23][TOP]
>UniRef100_UPI0000EBDCD2 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
isoform 4 n=1 Tax=Bos taurus RepID=UPI0000EBDCD2
Length = 1970
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP + SP+YSP+SP +SP S YSP+ P YSPSS +YTPQ+
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS-PRYTPQS 1815
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1702 TSPSYSPTSPSYSPTSP 1718
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1632 TSPNYSPTSPSYSPTSP 1648
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + YTP
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPN-YTP 1757
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1646 TSPSYSPTSPSYSPTSP 1662
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 65.1 bits (157), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P SP + SP YSPSSP +SP S Y+P+ P YSPSS +YTP
Sbjct: 1799 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSS-PEYTP 1855
Score = 35.4 bits (80), Expect(2) = 9e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1779 TSPNYSPTSPSYSPTSP 1795
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1639 TSPSYSPTSPSYSPTSP 1655
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP ++P S YSP+ P YSP+S + YTP
Sbjct: 1722 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPN-YTP 1778
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1667 TSPSYSPTSPSYSPTSP 1683
Score = 63.5 bits (153), Expect(2) = 6e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ Y+P SPTY+PSSP S SP YSP+SP+++P S YSPS P Y+P+S +Y+P
Sbjct: 1806 PSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS-PKYSP 1862
Score = 34.3 bits (77), Expect(2) = 6e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ T PSYSPTSP
Sbjct: 1751 TSPNYTPTSPSYSPTSP 1767
Score = 63.9 bits (154), Expect(2) = 7e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P Y+PSSP+YSPSSP S SP Y+P+SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1813 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869
Score = 33.5 bits (75), Expect(2) = 7e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1758 TSPSYSPTSPSYSPTSP 1774
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1834 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1890
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1786 TSPSYSPTSPSYSPTSP 1802
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1883 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1942
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1856 TSPKYSPTSPKYSPTSP 1872
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1590 SPSYSPTSPAYEPRSP 1605
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1841 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1897
Score = 30.4 bits (67), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS + PSYSPTSP
Sbjct: 1821 SSPSYSPSSPSYSPTSP 1837
Score = 62.0 bits (149), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1869 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1925
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 1835 TSPKYTPTSPSYSPSSP 1851
Score = 57.4 bits (137), Expect(2) = 6e-11
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP Y+P+SP S SP YSP+SP SPS YSPS P Y+P S + YTP
Sbjct: 1764 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPSSPRYTPQSPT-YTP 1820
Query: 344 QT 339
+
Sbjct: 1821 SS 1822
Score = 33.5 bits (75), Expect(2) = 6e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1709 TSPSYSPTSPSYSPTSP 1725
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1680
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1612 SPSYSPTSPSYSPTSP 1627
Score = 59.7 bits (143), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1862 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1918
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P Y+PTSP
Sbjct: 1828 SSPSYSPTSPKYTPTSP 1844
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1627 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1686
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1687 PTSPS-YSP 1694
Score = 65.1 bits (157), Expect = 3e-09
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN YSP+SP Y+P+SP S SP YSP+SP ++P S YSP+ P YSP+S
Sbjct: 1739 PSYSPTSPN---YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Query: 359 SQYTP 345
S Y+P
Sbjct: 1796 S-YSP 1799
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 64.7 bits (156), Expect = 4e-09
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + PN S P+SP+YSP+SP S SP YSPSSP+++P S Y+PS P YSPSS
Sbjct: 1774 PNYTPTSPNYS---PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Query: 359 SQYTP 345
S Y+P
Sbjct: 1831 S-YSP 1834
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1617 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1673
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1608 YTPQSPSYSPTSP 1620
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1897 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1951
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1714
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1715 PTSPS-YSP 1722
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1683 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1742
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1743 PTSPN-YSP 1750
Score = 43.5 bits (101), Expect(2) = 2e-06
Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSG---VSPDYSPSSPQFSPSTGYSPSQPGYSPSST 360
P YSP+SPTYSP+SP S SP YSP+SP YS + P SP +
Sbjct: 1918 PTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPT------YSLTSPAISPDDS 1966
Score = 32.0 bits (71), Expect(2) = 2e-06
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1905 TSPKYSPTSPTYSPTSP 1921
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP+Y+P+SP +SP S YSP+ P Y+
Sbjct: 1718 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 1777
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1778 PTSPN-YSP 1785
[24][TOP]
>UniRef100_UPI0000DA33D8 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Rattus norvegicus RepID=UPI0000DA33D8
Length = 1970
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP + SP+YSP+SP +SP S YSP+ P YSPSS +YTPQ+
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS-PRYTPQS 1815
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1702 TSPSYSPTSPSYSPTSP 1718
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1632 TSPNYSPTSPSYSPTSP 1648
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + YTP
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPN-YTP 1757
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1646 TSPSYSPTSPSYSPTSP 1662
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 65.1 bits (157), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P SP + SP YSPSSP +SP S Y+P+ P YSPSS +YTP
Sbjct: 1799 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSS-PEYTP 1855
Score = 35.4 bits (80), Expect(2) = 9e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1779 TSPNYSPTSPSYSPTSP 1795
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1639 TSPSYSPTSPSYSPTSP 1655
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP ++P S YSP+ P YSP+S + YTP
Sbjct: 1722 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPN-YTP 1778
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1667 TSPSYSPTSPSYSPTSP 1683
Score = 63.5 bits (153), Expect(2) = 6e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ Y+P SPTY+PSSP S SP YSP+SP+++P S YSPS P Y+P+S +Y+P
Sbjct: 1806 PSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS-PKYSP 1862
Score = 34.3 bits (77), Expect(2) = 6e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ T PSYSPTSP
Sbjct: 1751 TSPNYTPTSPSYSPTSP 1767
Score = 63.9 bits (154), Expect(2) = 7e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P Y+PSSP+YSPSSP S SP Y+P+SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1813 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869
Score = 33.5 bits (75), Expect(2) = 7e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1758 TSPSYSPTSPSYSPTSP 1774
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1834 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1890
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1786 TSPSYSPTSPSYSPTSP 1802
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1883 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1942
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1856 TSPKYSPTSPKYSPTSP 1872
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1590 SPSYSPTSPAYEPRSP 1605
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1841 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1897
Score = 30.4 bits (67), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS + PSYSPTSP
Sbjct: 1821 SSPSYSPSSPSYSPTSP 1837
Score = 62.0 bits (149), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1869 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1925
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 1835 TSPKYTPTSPSYSPSSP 1851
Score = 57.4 bits (137), Expect(2) = 6e-11
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP Y+P+SP S SP YSP+SP SPS YSPS P Y+P S + YTP
Sbjct: 1764 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPSSPRYTPQSPT-YTP 1820
Query: 344 QT 339
+
Sbjct: 1821 SS 1822
Score = 33.5 bits (75), Expect(2) = 6e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1709 TSPSYSPTSPSYSPTSP 1725
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1680
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1612 SPSYSPTSPSYSPTSP 1627
Score = 59.7 bits (143), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1862 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1918
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P Y+PTSP
Sbjct: 1828 SSPSYSPTSPKYTPTSP 1844
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1627 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1686
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1687 PTSPS-YSP 1694
Score = 65.1 bits (157), Expect = 3e-09
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN YSP+SP Y+P+SP S SP YSP+SP ++P S YSP+ P YSP+S
Sbjct: 1739 PSYSPTSPN---YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Query: 359 SQYTP 345
S Y+P
Sbjct: 1796 S-YSP 1799
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 64.7 bits (156), Expect = 4e-09
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + PN S P+SP+YSP+SP S SP YSPSSP+++P S Y+PS P YSPSS
Sbjct: 1774 PNYTPTSPNYS---PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Query: 359 SQYTP 345
S Y+P
Sbjct: 1831 S-YSP 1834
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1617 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1673
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1608 YTPQSPSYSPTSP 1620
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1897 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1951
Score = 50.1 bits (118), Expect(2) = 3e-08
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP GYSP+ P YS +S + +P
Sbjct: 1911 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP------GYSPTSPTYSLTSPA-ISP 1963
Query: 344 QTNDKD 327
+ +D++
Sbjct: 1964 EDSDEE 1969
Score = 31.6 bits (70), Expect(2) = 3e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1863 TSPKYSPTSPKYSPTSP 1879
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1714
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1715 PTSPS-YSP 1722
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1683 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1742
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1743 PTSPN-YSP 1750
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP+Y+P+SP +SP S YSP+ P Y+
Sbjct: 1718 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 1777
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1778 PTSPN-YSP 1785
[25][TOP]
>UniRef100_O35559 DNA-directed RNA polymerase n=1 Tax=Cricetulus griseus
RepID=O35559_CRIGR
Length = 1970
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP + SP+YSP+SP +SP S YSP+ P YSPSS +YTPQ+
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS-PRYTPQS 1815
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1702 TSPSYSPTSPSYSPTSP 1718
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1632 TSPNYSPTSPSYSPTSP 1648
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + YTP
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPN-YTP 1757
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1646 TSPSYSPTSPSYSPTSP 1662
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 65.1 bits (157), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P SP + SP YSPSSP +SP S Y+P+ P YSPSS +YTP
Sbjct: 1799 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSS-PEYTP 1855
Score = 35.4 bits (80), Expect(2) = 9e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1779 TSPNYSPTSPSYSPTSP 1795
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1639 TSPSYSPTSPSYSPTSP 1655
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP ++P S YSP+ P YSP+S + YTP
Sbjct: 1722 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPN-YTP 1778
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1667 TSPSYSPTSPSYSPTSP 1683
Score = 63.5 bits (153), Expect(2) = 6e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ Y+P SPTY+PSSP S SP YSP+SP+++P S YSPS P Y+P+S +Y+P
Sbjct: 1806 PSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS-PKYSP 1862
Score = 34.3 bits (77), Expect(2) = 6e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ T PSYSPTSP
Sbjct: 1751 TSPNYTPTSPSYSPTSP 1767
Score = 63.9 bits (154), Expect(2) = 7e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P Y+PSSP+YSPSSP S SP Y+P+SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1813 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869
Score = 33.5 bits (75), Expect(2) = 7e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1758 TSPSYSPTSPSYSPTSP 1774
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1834 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1890
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1786 TSPSYSPTSPSYSPTSP 1802
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1883 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1942
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1856 TSPKYSPTSPKYSPTSP 1872
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1590 SPSYSPTSPAYEPRSP 1605
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1841 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1897
Score = 30.4 bits (67), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS + PSYSPTSP
Sbjct: 1821 SSPSYSPSSPSYSPTSP 1837
Score = 62.0 bits (149), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1869 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1925
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 1835 TSPKYTPTSPSYSPSSP 1851
Score = 57.4 bits (137), Expect(2) = 6e-11
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP Y+P+SP S SP YSP+SP SPS YSPS P Y+P S + YTP
Sbjct: 1764 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPSSPRYTPQSPT-YTP 1820
Query: 344 QT 339
+
Sbjct: 1821 SS 1822
Score = 33.5 bits (75), Expect(2) = 6e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1709 TSPSYSPTSPSYSPTSP 1725
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1680
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1612 SPSYSPTSPSYSPTSP 1627
Score = 59.7 bits (143), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1862 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1918
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P Y+PTSP
Sbjct: 1828 SSPSYSPTSPKYTPTSP 1844
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1627 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1686
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1687 PTSPS-YSP 1694
Score = 65.1 bits (157), Expect = 3e-09
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN YSP+SP Y+P+SP S SP YSP+SP ++P S YSP+ P YSP+S
Sbjct: 1739 PSYSPTSPN---YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Query: 359 SQYTP 345
S Y+P
Sbjct: 1796 S-YSP 1799
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 64.7 bits (156), Expect = 4e-09
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + PN S P+SP+YSP+SP S SP YSPSSP+++P S Y+PS P YSPSS
Sbjct: 1774 PNYTPTSPNYS---PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Query: 359 SQYTP 345
S Y+P
Sbjct: 1831 S-YSP 1834
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1617 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1673
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1608 YTPQSPSYSPTSP 1620
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1897 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1951
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1911 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1968
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1863 TSPKYSPTSPKYSPTSP 1879
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1714
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1715 PTSPS-YSP 1722
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1683 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1742
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1743 PTSPN-YSP 1750
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP+Y+P+SP +SP S YSP+ P Y+
Sbjct: 1718 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 1777
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1778 PTSPN-YSP 1785
[26][TOP]
>UniRef100_A6NN93 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=A6NN93_HUMAN
Length = 1970
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP + SP+YSP+SP +SP S YSP+ P YSPSS +YTPQ+
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS-PRYTPQS 1815
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1702 TSPSYSPTSPSYSPTSP 1718
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1632 TSPNYSPTSPSYSPTSP 1648
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + YTP
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPN-YTP 1757
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1646 TSPSYSPTSPSYSPTSP 1662
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 65.1 bits (157), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P SP + SP YSPSSP +SP S Y+P+ P YSPSS +YTP
Sbjct: 1799 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPASPKYTPTSPSYSPSS-PEYTP 1855
Score = 35.4 bits (80), Expect(2) = 9e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1779 TSPNYSPTSPSYSPTSP 1795
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1639 TSPSYSPTSPSYSPTSP 1655
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP ++P S YSP+ P YSP+S + YTP
Sbjct: 1722 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPN-YTP 1778
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1667 TSPSYSPTSPSYSPTSP 1683
Score = 63.5 bits (153), Expect(2) = 6e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ Y+P SPTY+PSSP S SP YSP+SP+++P S YSPS P Y+P+S +Y+P
Sbjct: 1806 PSSPRYTPQSPTYTPSSPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTPTS-PKYSP 1862
Score = 34.3 bits (77), Expect(2) = 6e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ T PSYSPTSP
Sbjct: 1751 TSPNYTPTSPSYSPTSP 1767
Score = 63.9 bits (154), Expect(2) = 7e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P Y+PSSP+YSPSSP S SP Y+P+SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1813 PQSPTYTPSSPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869
Score = 33.5 bits (75), Expect(2) = 7e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1758 TSPSYSPTSPSYSPTSP 1774
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1841 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1897
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1786 TSPSYSPTSPSYSPTSP 1802
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1883 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1942
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1856 TSPKYSPTSPKYSPTSP 1872
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1590 SPSYSPTSPAYEPRSP 1605
Score = 62.8 bits (151), Expect(2) = 5e-11
Identities = 30/53 (56%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1839 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1890
Score = 62.0 bits (149), Expect(2) = 5e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1869 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1925
Score = 29.3 bits (64), Expect(2) = 5e-11
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + P Y+PTSP
Sbjct: 1842 TSPSYSPSSPEYTPTSP 1858
Score = 28.5 bits (62), Expect(2) = 5e-11
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS + PSYSP SP
Sbjct: 1821 SSPSYSPSSPSYSPASP 1837
Score = 57.4 bits (137), Expect(2) = 6e-11
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP Y+P+SP S SP YSP+SP SPS YSPS P Y+P S + YTP
Sbjct: 1764 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPSSPRYTPQSPT-YTP 1820
Query: 344 QT 339
+
Sbjct: 1821 SS 1822
Score = 33.5 bits (75), Expect(2) = 6e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1709 TSPSYSPTSPSYSPTSP 1725
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1680
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1612 SPSYSPTSPSYSPTSP 1627
Score = 59.7 bits (143), Expect(2) = 3e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1862 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1918
Score = 28.9 bits (63), Expect(2) = 3e-10
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP Y+ T P YSPTSP
Sbjct: 1849 SSPEYTPTSPKYSPTSP 1865
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1627 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1686
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1687 PTSPS-YSP 1694
Score = 65.1 bits (157), Expect = 3e-09
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN YSP+SP Y+P+SP S SP YSP+SP ++P S YSP+ P YSP+S
Sbjct: 1739 PSYSPTSPN---YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Query: 359 SQYTP 345
S Y+P
Sbjct: 1796 S-YSP 1799
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 64.7 bits (156), Expect = 4e-09
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + PN S P+SP+YSP+SP S SP YSPSSP+++P S Y+PS P YSPSS
Sbjct: 1774 PNYTPTSPNYS---PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Query: 359 SQYTP 345
S Y+P
Sbjct: 1831 S-YSP 1834
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1617 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1673
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1608 YTPQSPSYSPTSP 1620
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1897 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1951
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1911 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1968
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1863 TSPKYSPTSPKYSPTSP 1879
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1714
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1715 PTSPS-YSP 1722
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1683 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1742
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1743 PTSPN-YSP 1750
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP+Y+P+SP +SP S YSP+ P Y+
Sbjct: 1718 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 1777
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1778 PTSPN-YSP 1785
[27][TOP]
>UniRef100_P08775 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Mus musculus
RepID=RPB1_MOUSE
Length = 1970
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP + SP+YSP+SP +SP S YSP+ P YSPSS +YTPQ+
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS-PRYTPQS 1815
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1702 TSPSYSPTSPSYSPTSP 1718
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1632 TSPNYSPTSPSYSPTSP 1648
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + YTP
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPN-YTP 1757
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1646 TSPSYSPTSPSYSPTSP 1662
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 65.1 bits (157), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P SP + SP YSPSSP +SP S Y+P+ P YSPSS +YTP
Sbjct: 1799 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSS-PEYTP 1855
Score = 35.4 bits (80), Expect(2) = 9e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1779 TSPNYSPTSPSYSPTSP 1795
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1639 TSPSYSPTSPSYSPTSP 1655
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP ++P S YSP+ P YSP+S + YTP
Sbjct: 1722 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPN-YTP 1778
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1667 TSPSYSPTSPSYSPTSP 1683
Score = 63.5 bits (153), Expect(2) = 6e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ Y+P SPTY+PSSP S SP YSP+SP+++P S YSPS P Y+P+S +Y+P
Sbjct: 1806 PSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPAS-PKYSP 1862
Score = 34.3 bits (77), Expect(2) = 6e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ T PSYSPTSP
Sbjct: 1751 TSPNYTPTSPSYSPTSP 1767
Score = 63.9 bits (154), Expect(2) = 7e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P Y+PSSP+YSPSSP S SP Y+P+SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1813 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTS-PKYSP 1869
Score = 33.5 bits (75), Expect(2) = 7e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1758 TSPSYSPTSPSYSPTSP 1774
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1834 PTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1890
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1786 TSPSYSPTSPSYSPTSP 1802
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1883 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1942
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1863 TSPKYSPTSPKYSPTSP 1879
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1590 SPSYSPTSPAYEPRSP 1605
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1841 PTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1897
Score = 30.4 bits (67), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS + PSYSPTSP
Sbjct: 1821 SSPSYSPSSPSYSPTSP 1837
Score = 62.0 bits (149), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1869 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1925
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 1835 TSPKYTPTSPSYSPSSP 1851
Score = 57.4 bits (137), Expect(2) = 6e-11
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP Y+P+SP S SP YSP+SP SPS YSPS P Y+P S + YTP
Sbjct: 1764 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPSSPRYTPQSPT-YTP 1820
Query: 344 QT 339
+
Sbjct: 1821 SS 1822
Score = 33.5 bits (75), Expect(2) = 6e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1709 TSPSYSPTSPSYSPTSP 1725
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1680
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1612 SPSYSPTSPSYSPTSP 1627
Score = 59.7 bits (143), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1862 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1918
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P Y+PTSP
Sbjct: 1828 SSPSYSPTSPKYTPTSP 1844
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1627 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1686
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1687 PTSPS-YSP 1694
Score = 65.1 bits (157), Expect = 3e-09
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN YSP+SP Y+P+SP S SP YSP+SP ++P S YSP+ P YSP+S
Sbjct: 1739 PSYSPTSPN---YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Query: 359 SQYTP 345
S Y+P
Sbjct: 1796 S-YSP 1799
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 64.7 bits (156), Expect = 4e-09
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + PN S P+SP+YSP+SP S SP YSPSSP+++P S Y+PS P YSPSS
Sbjct: 1774 PNYTPTSPNYS---PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Query: 359 SQYTP 345
S Y+P
Sbjct: 1831 S-YSP 1834
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1617 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1673
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1608 YTPQSPSYSPTSP 1620
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1897 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1951
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1911 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1968
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1877 TSPTYSPTTPKYSPTSP 1893
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1714
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1715 PTSPS-YSP 1722
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1683 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1742
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1743 PTSPN-YSP 1750
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP+Y+P+SP +SP S YSP+ P Y+
Sbjct: 1718 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 1777
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1778 PTSPN-YSP 1785
[28][TOP]
>UniRef100_P24928 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Euarchontoglires
RepID=RPB1_HUMAN
Length = 1970
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP + SP+YSP+SP +SP S YSP+ P YSPSS +YTPQ+
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS-PRYTPQS 1815
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1702 TSPSYSPTSPSYSPTSP 1718
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1632 TSPNYSPTSPSYSPTSP 1648
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + YTP
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPN-YTP 1757
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1646 TSPSYSPTSPSYSPTSP 1662
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 65.1 bits (157), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P SP + SP YSPSSP +SP S Y+P+ P YSPSS +YTP
Sbjct: 1799 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSS-PEYTP 1855
Score = 35.4 bits (80), Expect(2) = 9e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1779 TSPNYSPTSPSYSPTSP 1795
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1639 TSPSYSPTSPSYSPTSP 1655
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP ++P S YSP+ P YSP+S + YTP
Sbjct: 1722 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPN-YTP 1778
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1667 TSPSYSPTSPSYSPTSP 1683
Score = 63.5 bits (153), Expect(2) = 6e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ Y+P SPTY+PSSP S SP YSP+SP+++P S YSPS P Y+P+S +Y+P
Sbjct: 1806 PSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS-PKYSP 1862
Score = 34.3 bits (77), Expect(2) = 6e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ T PSYSPTSP
Sbjct: 1751 TSPNYTPTSPSYSPTSP 1767
Score = 63.9 bits (154), Expect(2) = 7e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P Y+PSSP+YSPSSP S SP Y+P+SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1813 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869
Score = 33.5 bits (75), Expect(2) = 7e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1758 TSPSYSPTSPSYSPTSP 1774
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1834 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1890
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1786 TSPSYSPTSPSYSPTSP 1802
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1883 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1942
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1856 TSPKYSPTSPKYSPTSP 1872
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1590 SPSYSPTSPAYEPRSP 1605
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1841 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1897
Score = 30.4 bits (67), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS + PSYSPTSP
Sbjct: 1821 SSPSYSPSSPSYSPTSP 1837
Score = 62.0 bits (149), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1869 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1925
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 1835 TSPKYTPTSPSYSPSSP 1851
Score = 57.4 bits (137), Expect(2) = 6e-11
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP Y+P+SP S SP YSP+SP SPS YSPS P Y+P S + YTP
Sbjct: 1764 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPSSPRYTPQSPT-YTP 1820
Query: 344 QT 339
+
Sbjct: 1821 SS 1822
Score = 33.5 bits (75), Expect(2) = 6e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1709 TSPSYSPTSPSYSPTSP 1725
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1680
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1612 SPSYSPTSPSYSPTSP 1627
Score = 59.7 bits (143), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1862 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1918
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P Y+PTSP
Sbjct: 1828 SSPSYSPTSPKYTPTSP 1844
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1627 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1686
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1687 PTSPS-YSP 1694
Score = 65.1 bits (157), Expect = 3e-09
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN YSP+SP Y+P+SP S SP YSP+SP ++P S YSP+ P YSP+S
Sbjct: 1739 PSYSPTSPN---YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Query: 359 SQYTP 345
S Y+P
Sbjct: 1796 S-YSP 1799
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 64.7 bits (156), Expect = 4e-09
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + PN S P+SP+YSP+SP S SP YSPSSP+++P S Y+PS P YSPSS
Sbjct: 1774 PNYTPTSPNYS---PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Query: 359 SQYTP 345
S Y+P
Sbjct: 1831 S-YSP 1834
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1617 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1673
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1608 YTPQSPSYSPTSP 1620
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1897 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1951
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1911 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1968
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1863 TSPKYSPTSPKYSPTSP 1879
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1714
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1715 PTSPS-YSP 1722
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1683 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1742
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1743 PTSPN-YSP 1750
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP+Y+P+SP +SP S YSP+ P Y+
Sbjct: 1718 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 1777
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1778 PTSPN-YSP 1785
[29][TOP]
>UniRef100_UPI0001B7A25C UPI0001B7A25C related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25C
Length = 1968
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP + SP+YSP+SP +SP S YSP+ P YSPSS +YTPQ+
Sbjct: 1759 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS-PRYTPQS 1817
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1704 TSPSYSPTSPSYSPTSP 1720
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1661 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1717
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1634 TSPNYSPTSPSYSPTSP 1650
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + YTP
Sbjct: 1703 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPN-YTP 1759
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1648 TSPSYSPTSPSYSPTSP 1664
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1682 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1738
Score = 65.1 bits (157), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P SP + SP YSPSSP +SP S Y+P+ P YSPSS +YTP
Sbjct: 1801 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSS-PEYTP 1857
Score = 35.4 bits (80), Expect(2) = 9e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1781 TSPNYSPTSPSYSPTSP 1797
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1641 TSPSYSPTSPSYSPTSP 1657
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP ++P S YSP+ P YSP+S + YTP
Sbjct: 1724 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPN-YTP 1780
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1669 TSPSYSPTSPSYSPTSP 1685
Score = 63.5 bits (153), Expect(2) = 6e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ Y+P SPTY+PSSP S SP YSP+SP+++P S YSPS P Y+P+S +Y+P
Sbjct: 1808 PSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS-PKYSP 1864
Score = 34.3 bits (77), Expect(2) = 6e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ T PSYSPTSP
Sbjct: 1753 TSPNYTPTSPSYSPTSP 1769
Score = 63.9 bits (154), Expect(2) = 7e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P Y+PSSP+YSPSSP S SP Y+P+SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1815 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS-PKYSP 1871
Score = 33.5 bits (75), Expect(2) = 7e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1760 TSPSYSPTSPSYSPTSP 1776
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1836 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1892
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1788 TSPSYSPTSPSYSPTSP 1804
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1885 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1944
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1858 TSPKYSPTSPKYSPTSP 1874
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1612 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1668
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1592 SPSYSPTSPAYEPRSP 1607
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1843 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1899
Score = 30.4 bits (67), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS + PSYSPTSP
Sbjct: 1823 SSPSYSPSSPSYSPTSP 1839
Score = 62.0 bits (149), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1871 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1927
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 1837 TSPKYTPTSPSYSPSSP 1853
Score = 57.4 bits (137), Expect(2) = 6e-11
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP Y+P+SP S SP YSP+SP SPS YSPS P Y+P S + YTP
Sbjct: 1766 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPSSPRYTPQSPT-YTP 1822
Query: 344 QT 339
+
Sbjct: 1823 SS 1824
Score = 33.5 bits (75), Expect(2) = 6e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1711 TSPSYSPTSPSYSPTSP 1727
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1626 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1682
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1614 SPSYSPTSPSYSPTSP 1629
Score = 59.7 bits (143), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1864 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1920
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P Y+PTSP
Sbjct: 1830 SSPSYSPTSPKYTPTSP 1846
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1629 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1688
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1689 PTSPS-YSP 1696
Score = 65.1 bits (157), Expect = 3e-09
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN YSP+SP Y+P+SP S SP YSP+SP ++P S YSP+ P YSP+S
Sbjct: 1741 PSYSPTSPN---YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1797
Query: 359 SQYTP 345
S Y+P
Sbjct: 1798 S-YSP 1801
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1610 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1661
Score = 64.7 bits (156), Expect = 4e-09
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + PN S P+SP+YSP+SP S SP YSPSSP+++P S Y+PS P YSPSS
Sbjct: 1776 PNYTPTSPNYS---PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1832
Query: 359 SQYTP 345
S Y+P
Sbjct: 1833 S-YSP 1836
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1619 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1675
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1610 YTPQSPSYSPTSP 1622
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1899 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1953
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1657 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1716
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1717 PTSPS-YSP 1724
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1685 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1744
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1745 PTSPN-YSP 1752
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP+Y+P+SP +SP S YSP+ P Y+
Sbjct: 1720 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 1779
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1780 PTSPN-YSP 1787
[30][TOP]
>UniRef100_O08847 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=O08847_MOUSE
Length = 1966
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP + SP+YSP+SP +SP S YSP+ P YSPSS +YTPQ+
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS-PRYTPQS 1815
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1702 TSPSYSPTSPSYSPTSP 1718
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1632 TSPNYSPTSPSYSPTSP 1648
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + YTP
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPN-YTP 1757
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1646 TSPSYSPTSPSYSPTSP 1662
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 65.1 bits (157), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P SP + SP YSPSSP +SP S Y+P+ P YSPSS +YTP
Sbjct: 1799 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSS-PEYTP 1855
Score = 35.4 bits (80), Expect(2) = 9e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1779 TSPNYSPTSPSYSPTSP 1795
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1639 TSPSYSPTSPSYSPTSP 1655
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP ++P S YSP+ P YSP+S + YTP
Sbjct: 1722 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPN-YTP 1778
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1667 TSPSYSPTSPSYSPTSP 1683
Score = 63.5 bits (153), Expect(2) = 6e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ Y+P SPTY+PSSP S SP YSP+SP+++P S YSPS P Y+P+S +Y+P
Sbjct: 1806 PSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPAS-PKYSP 1862
Score = 34.3 bits (77), Expect(2) = 6e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ T PSYSPTSP
Sbjct: 1751 TSPNYTPTSPSYSPTSP 1767
Score = 63.9 bits (154), Expect(2) = 7e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P Y+PSSP+YSPSSP S SP Y+P+SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1813 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTS-PKYSP 1869
Score = 33.5 bits (75), Expect(2) = 7e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1758 TSPSYSPTSPSYSPTSP 1774
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1834 PTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1890
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1786 TSPSYSPTSPSYSPTSP 1802
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1883 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1942
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1863 TSPKYSPTSPKYSPTSP 1879
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1590 SPSYSPTSPAYEPRSP 1605
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1841 PTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1897
Score = 30.4 bits (67), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS + PSYSPTSP
Sbjct: 1821 SSPSYSPSSPSYSPTSP 1837
Score = 62.0 bits (149), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1869 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1925
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 1835 TSPKYTPTSPSYSPSSP 1851
Score = 57.4 bits (137), Expect(2) = 6e-11
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP Y+P+SP S SP YSP+SP SPS YSPS P Y+P S + YTP
Sbjct: 1764 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPSSPRYTPQSPT-YTP 1820
Query: 344 QT 339
+
Sbjct: 1821 SS 1822
Score = 33.5 bits (75), Expect(2) = 6e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1709 TSPSYSPTSPSYSPTSP 1725
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1680
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1612 SPSYSPTSPSYSPTSP 1627
Score = 59.7 bits (143), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1862 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1918
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P Y+PTSP
Sbjct: 1828 SSPSYSPTSPKYTPTSP 1844
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1627 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1686
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1687 PTSPS-YSP 1694
Score = 65.1 bits (157), Expect = 3e-09
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN YSP+SP Y+P+SP S SP YSP+SP ++P S YSP+ P YSP+S
Sbjct: 1739 PSYSPTSPN---YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Query: 359 SQYTP 345
S Y+P
Sbjct: 1796 S-YSP 1799
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 64.7 bits (156), Expect = 4e-09
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + PN S P+SP+YSP+SP S SP YSPSSP+++P S Y+PS P YSPSS
Sbjct: 1774 PNYTPTSPNYS---PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Query: 359 SQYTP 345
S Y+P
Sbjct: 1831 S-YSP 1834
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1617 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1673
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1608 YTPQSPSYSPTSP 1620
Score = 62.8 bits (151), Expect = 2e-08
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSST- 360
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1897 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTSPT 1953
Query: 359 -SQYTPQTNDKD 327
S +P +D++
Sbjct: 1954 YSLTSPAISDEE 1965
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1714
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1715 PTSPS-YSP 1722
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1683 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1742
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1743 PTSPN-YSP 1750
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP+Y+P+SP +SP S YSP+ P Y+
Sbjct: 1718 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 1777
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1778 PTSPN-YSP 1785
[31][TOP]
>UniRef100_B4E3V7 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4E3V7_HUMAN
Length = 1935
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP + SP+YSP+SP +SP S YSP+ P YSPSS +YTPQ+
Sbjct: 1722 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS-PRYTPQS 1780
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1667 TSPSYSPTSPSYSPTSP 1683
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + YTP
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPN-YTP 1722
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1611 TSPSYSPTSPSYSPTSP 1627
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1624 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1680
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1701
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1604 TSPSYSPTSPSYSPTSP 1620
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1618 TSPSYSPTSPSYSPTSP 1634
Score = 68.6 bits (166), Expect(2) = 1e-13
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1596 PTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1652
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP ++P S YSP+ P YSP+S + YTP
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPN-YTP 1743
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1632 TSPSYSPTSPSYSPTSP 1648
Score = 31.6 bits (70), Expect(2) = 1e-13
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1577 SPSYSPTSPSYSPTSP 1592
Score = 64.3 bits (155), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P SP + SP YSPSSP +SP S Y+P+ P YSPSS +YTP
Sbjct: 1764 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPPYSPSS-PEYTP 1820
Score = 35.4 bits (80), Expect(2) = 1e-13
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1744 TSPNYSPTSPSYSPTSP 1760
Score = 61.6 bits (148), Expect(2) = 2e-12
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P+ Y+P SPTY+PSSP S SP YSP+SP+++P S YSPS P Y+P+S
Sbjct: 1771 PSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPPYSPSSPEYTPTS 1822
Score = 34.3 bits (77), Expect(2) = 2e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ T PSYSPTSP
Sbjct: 1716 TSPNYTPTSPSYSPTSP 1732
Score = 62.0 bits (149), Expect(2) = 3e-12
Identities = 30/58 (51%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P Y+PSSP+YSPSSP S SP Y+P+SP +SPS+ Y+P+ P +SP+S +Y+P
Sbjct: 1778 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPPYSPSSPEYTPTSPKFSPTS-PKYSP 1834
Score = 33.5 bits (75), Expect(2) = 3e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1723 TSPSYSPTSPSYSPTSP 1739
Score = 64.7 bits (156), Expect(2) = 3e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1848 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPQYSPTSPTYSPTSPKGSTYSP 1907
Score = 30.4 bits (67), Expect(2) = 3e-12
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPT+P
Sbjct: 1835 TSPKYSPTGPTYSPTTP 1851
Score = 61.2 bits (147), Expect(2) = 4e-12
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP+ YSP+ P YSP+S + Y+P
Sbjct: 1806 PTSPPYSPSSPEYTPTSPKFSPTSPKYSPTSPKYSPTGPTYSPTTPKYSPTSPT-YSP 1862
Score = 33.5 bits (75), Expect(2) = 4e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1751 TSPSYSPTSPSYSPTSP 1767
Score = 62.4 bits (150), Expect(2) = 2e-11
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 11/62 (17%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-----------TGYSPSQPGYSP 369
P YSP+SP Y+P+SP S SP YSP+SPQ+SP+ + YSP+ PGYSP
Sbjct: 1855 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPQYSPTSPTYSPTSPKGSTYSPTSPGYSP 1914
Query: 368 SS 363
+S
Sbjct: 1915 TS 1916
Score = 62.0 bits (149), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+ PTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S QY+P
Sbjct: 1834 PTSPKYSPTGPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PQYSP 1890
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS + PSYSPTSP
Sbjct: 1786 SSPSYSPSSPSYSPTSP 1802
Score = 30.0 bits (66), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP +S T P YSPTSP
Sbjct: 1821 TSPKFSPTSPKYSPTSP 1837
Score = 64.3 bits (155), Expect(2) = 6e-11
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S S +YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1575 PQSPSYSPTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1631
Score = 57.4 bits (137), Expect(2) = 6e-11
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP Y+P+SP S SP YSP+SP SPS YSPS P Y+P S + YTP
Sbjct: 1729 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPSSPRYTPQSPT-YTP 1785
Query: 344 QT 339
+
Sbjct: 1786 SS 1787
Score = 33.5 bits (75), Expect(2) = 6e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1674 TSPSYSPTSPSYSPTSP 1690
Score = 26.6 bits (57), Expect(2) = 6e-11
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1555 SPSYSPTSPAYEPRSP 1570
Score = 67.8 bits (164), Expect = 5e-10
Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1596 PTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1655
Query: 359 SQYTP 345
S Y+P
Sbjct: 1656 S-YSP 1659
Score = 60.1 bits (144), Expect(2) = 8e-10
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP YSPSSP + SP +SP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1799 PTSPKYTPTSPPYSPSSPEYTPTSPKFSPTSPKYSPTSPKYSPTGPTYSP-TTPKYSP 1855
Score = 26.9 bits (58), Expect(2) = 8e-10
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP Y+ + PSYSP+SP
Sbjct: 1780 SPTYTPSSPSYSPSSP 1795
Score = 52.8 bits (125), Expect(2) = 1e-09
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQY 351
P YSP+SP+YSP SP SP Y+P SP ++PS+ YSPS P YSP+S +Y
Sbjct: 1750 PTSPSYSPTSPSYSPTSPSYSP----SSPRYTPQSPTYTPSSPSYSPSSPSYSPTS-PKY 1804
Query: 350 TP 345
TP
Sbjct: 1805 TP 1806
Score = 33.5 bits (75), Expect(2) = 1e-09
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1695 TSPSYSPTSPSYSPTSP 1711
Score = 65.1 bits (157), Expect = 3e-09
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN YSP+SP Y+P+SP S SP YSP+SP ++P S YSP+ P YSP+S
Sbjct: 1704 PSYSPTSPN---YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1760
Query: 359 SQYTP 345
S Y+P
Sbjct: 1761 S-YSP 1764
Score = 64.7 bits (156), Expect = 4e-09
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + PN S P+SP+YSP+SP S SP YSPSSP+++P S Y+PS P YSPSS
Sbjct: 1739 PNYTPTSPNYS---PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1795
Query: 359 SQYTP 345
S Y+P
Sbjct: 1796 S-YSP 1799
Score = 61.6 bits (148), Expect = 4e-08
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+S +SP S YSP+ P YSP+S S Y+P
Sbjct: 1573 YTPQSPSYSPTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSPS-YSP 1624
Score = 49.3 bits (116), Expect(2) = 9e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1876 PTSPTYSPTSPQYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1933
Score = 30.8 bits (68), Expect(2) = 9e-08
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
T+P YS T P+YSPTSP
Sbjct: 1849 TTPKYSPTSPTYSPTSP 1865
Score = 55.8 bits (133), Expect(2) = 1e-07
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP+YSP +SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1582 PTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1641
Query: 359 SQYTP 345
S Y+P
Sbjct: 1642 S-YSP 1645
Score = 23.5 bits (49), Expect(2) = 1e-07
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1573 YTPQSPSYSPTSP 1585
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1620 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1679
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1680 PTSPS-YSP 1687
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1648 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1707
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1708 PTSPN-YSP 1715
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP+Y+P+SP +SP S YSP+ P Y+
Sbjct: 1683 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 1742
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1743 PTSPN-YSP 1750
[32][TOP]
>UniRef100_UPI0000F2BF13 PREDICTED: similar to RNA polymerase II isoform 2 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF13
Length = 1932
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP + SP+YSP+SP +SP S YSP+ P YSPSS +YTPQ+
Sbjct: 1719 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS-PRYTPQS 1777
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1664 TSPSYSPTSPSYSPTSP 1680
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1621 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1677
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1594 TSPNYSPTSPSYSPTSP 1610
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + YTP
Sbjct: 1663 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPN-YTP 1719
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1608 TSPSYSPTSPSYSPTSP 1624
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1642 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1698
Score = 65.1 bits (157), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P SP + SP YSPSSP +SP S Y+P+ P YSPSS +YTP
Sbjct: 1761 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSS-PEYTP 1817
Score = 35.4 bits (80), Expect(2) = 9e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1741 TSPNYSPTSPSYSPTSP 1757
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1601 TSPSYSPTSPSYSPTSP 1617
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP ++P S YSP+ P YSP+S + YTP
Sbjct: 1684 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPN-YTP 1740
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1629 TSPSYSPTSPSYSPTSP 1645
Score = 63.5 bits (153), Expect(2) = 6e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ Y+P SPTY+PSSP S SP YSP+SP+++P S YSPS P Y+P+S +Y+P
Sbjct: 1768 PSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS-PKYSP 1824
Score = 34.3 bits (77), Expect(2) = 6e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ T PSYSPTSP
Sbjct: 1713 TSPNYTPTSPSYSPTSP 1729
Score = 63.9 bits (154), Expect(2) = 7e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P Y+PSSP+YSPSSP S SP Y+P+SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1775 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS-PKYSP 1831
Score = 33.5 bits (75), Expect(2) = 7e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1720 TSPSYSPTSPSYSPTSP 1736
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1796 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1852
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1748 TSPSYSPTSPSYSPTSP 1764
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1845 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1904
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1818 TSPKYSPTSPKYSPTSP 1834
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1572 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1628
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1552 SPSYSPTSPAYEPRSP 1567
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1803 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1859
Score = 30.4 bits (67), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS + PSYSPTSP
Sbjct: 1783 SSPSYSPSSPSYSPTSP 1799
Score = 62.0 bits (149), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1831 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1887
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 1797 TSPKYTPTSPSYSPSSP 1813
Score = 57.4 bits (137), Expect(2) = 6e-11
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP Y+P+SP S SP YSP+SP SPS YSPS P Y+P S + YTP
Sbjct: 1726 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPSSPRYTPQSPT-YTP 1782
Query: 344 QT 339
+
Sbjct: 1783 SS 1784
Score = 33.5 bits (75), Expect(2) = 6e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1671 TSPSYSPTSPSYSPTSP 1687
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1586 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1642
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1574 SPSYSPTSPSYSPTSP 1589
Score = 59.7 bits (143), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1824 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1880
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P Y+PTSP
Sbjct: 1790 SSPSYSPTSPKYTPTSP 1806
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1589 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1648
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1649 PTSPS-YSP 1656
Score = 65.1 bits (157), Expect = 3e-09
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN YSP+SP Y+P+SP S SP YSP+SP ++P S YSP+ P YSP+S
Sbjct: 1701 PSYSPTSPN---YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1757
Query: 359 SQYTP 345
S Y+P
Sbjct: 1758 S-YSP 1761
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1570 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1621
Score = 64.7 bits (156), Expect = 4e-09
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + PN S P+SP+YSP+SP S SP YSPSSP+++P S Y+PS P YSPSS
Sbjct: 1736 PNYTPTSPNYS---PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1792
Query: 359 SQYTP 345
S Y+P
Sbjct: 1793 S-YSP 1796
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1579 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1635
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1570 YTPQSPSYSPTSP 1582
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1859 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1913
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1873 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1930
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1825 TSPKYSPTSPKYSPTSP 1841
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1617 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1676
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1677 PTSPS-YSP 1684
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1645 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1704
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1705 PTSPN-YSP 1712
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP+Y+P+SP +SP S YSP+ P Y+
Sbjct: 1680 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 1739
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1740 PTSPN-YSP 1747
[33][TOP]
>UniRef100_UPI0001B7A25B UPI0001B7A25B related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25B
Length = 1932
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP + SP+YSP+SP +SP S YSP+ P YSPSS +YTPQ+
Sbjct: 1719 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS-PRYTPQS 1777
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1664 TSPSYSPTSPSYSPTSP 1680
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1621 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1677
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1594 TSPNYSPTSPSYSPTSP 1610
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + YTP
Sbjct: 1663 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPN-YTP 1719
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1608 TSPSYSPTSPSYSPTSP 1624
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1642 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1698
Score = 65.1 bits (157), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P SP + SP YSPSSP +SP S Y+P+ P YSPSS +YTP
Sbjct: 1761 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSS-PEYTP 1817
Score = 35.4 bits (80), Expect(2) = 9e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1741 TSPNYSPTSPSYSPTSP 1757
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1601 TSPSYSPTSPSYSPTSP 1617
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP ++P S YSP+ P YSP+S + YTP
Sbjct: 1684 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPN-YTP 1740
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1629 TSPSYSPTSPSYSPTSP 1645
Score = 63.5 bits (153), Expect(2) = 6e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ Y+P SPTY+PSSP S SP YSP+SP+++P S YSPS P Y+P+S +Y+P
Sbjct: 1768 PSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS-PKYSP 1824
Score = 34.3 bits (77), Expect(2) = 6e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ T PSYSPTSP
Sbjct: 1713 TSPNYTPTSPSYSPTSP 1729
Score = 63.9 bits (154), Expect(2) = 7e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P Y+PSSP+YSPSSP S SP Y+P+SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1775 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS-PKYSP 1831
Score = 33.5 bits (75), Expect(2) = 7e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1720 TSPSYSPTSPSYSPTSP 1736
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1796 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1852
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1748 TSPSYSPTSPSYSPTSP 1764
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1845 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1904
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1818 TSPKYSPTSPKYSPTSP 1834
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1572 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1628
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1552 SPSYSPTSPAYEPRSP 1567
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1803 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1859
Score = 30.4 bits (67), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS + PSYSPTSP
Sbjct: 1783 SSPSYSPSSPSYSPTSP 1799
Score = 62.0 bits (149), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1831 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1887
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 1797 TSPKYTPTSPSYSPSSP 1813
Score = 57.4 bits (137), Expect(2) = 6e-11
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP Y+P+SP S SP YSP+SP SPS YSPS P Y+P S + YTP
Sbjct: 1726 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPSSPRYTPQSPT-YTP 1782
Query: 344 QT 339
+
Sbjct: 1783 SS 1784
Score = 33.5 bits (75), Expect(2) = 6e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1671 TSPSYSPTSPSYSPTSP 1687
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1586 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1642
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1574 SPSYSPTSPSYSPTSP 1589
Score = 59.7 bits (143), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1824 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1880
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P Y+PTSP
Sbjct: 1790 SSPSYSPTSPKYTPTSP 1806
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1589 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1648
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1649 PTSPS-YSP 1656
Score = 65.1 bits (157), Expect = 3e-09
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN YSP+SP Y+P+SP S SP YSP+SP ++P S YSP+ P YSP+S
Sbjct: 1701 PSYSPTSPN---YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1757
Query: 359 SQYTP 345
S Y+P
Sbjct: 1758 S-YSP 1761
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1570 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1621
Score = 64.7 bits (156), Expect = 4e-09
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + PN S P+SP+YSP+SP S SP YSPSSP+++P S Y+PS P YSPSS
Sbjct: 1736 PNYTPTSPNYS---PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1792
Query: 359 SQYTP 345
S Y+P
Sbjct: 1793 S-YSP 1796
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1579 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1635
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1570 YTPQSPSYSPTSP 1582
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1859 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1913
Score = 50.1 bits (118), Expect(2) = 3e-08
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP GYSP+ P YS +S + +P
Sbjct: 1873 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP------GYSPTSPTYSLTSPA-ISP 1925
Query: 344 QTNDKD 327
+ +D++
Sbjct: 1926 EDSDEE 1931
Score = 31.6 bits (70), Expect(2) = 3e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1825 TSPKYSPTSPKYSPTSP 1841
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1617 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1676
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1677 PTSPS-YSP 1684
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1645 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1704
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1705 PTSPN-YSP 1712
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP+Y+P+SP +SP S YSP+ P Y+
Sbjct: 1680 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 1739
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1740 PTSPN-YSP 1747
[34][TOP]
>UniRef100_B4DET1 cDNA FLJ53860, highly similar to DNA-directed RNA polymerase II
largest subunit (EC 2.7.7.6) n=1 Tax=Homo sapiens
RepID=B4DET1_HUMAN
Length = 855
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP + SP+YSP+SP +SP S YSP+ P YSPSS +YTPQ+
Sbjct: 656 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS-PRYTPQS 714
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 601 TSPSYSPTSPSYSPTSP 617
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 558 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 614
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 531 TSPNYSPTSPSYSPTSP 547
Score = 66.2 bits (160), Expect(2) = 4e-14
Identities = 33/60 (55%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P Y+PSSP+YSPSSP S SP Y+P+SP++SP S YSP+ P YSP+S + Y+P T
Sbjct: 712 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPT-YSPTT 770
Score = 35.4 bits (80), Expect(2) = 4e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 678 TSPNYSPTSPSYSPTSP 694
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + YTP
Sbjct: 600 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPN-YTP 656
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 545 TSPSYSPTSPSYSPTSP 561
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 579 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 635
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 538 TSPSYSPTSPSYSPTSP 554
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP ++P S YSP+ P YSP+S + YTP
Sbjct: 621 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPN-YTP 677
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 566 TSPSYSPTSPSYSPTSP 582
Score = 62.8 bits (151), Expect(2) = 1e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ Y+P SPTY+PSSP S SP YSP+SP+++P S YSP+ P YSP+S +Y+P
Sbjct: 705 PSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPKYSPTSPKYSPTS-PKYSP 761
Score = 34.3 bits (77), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ T PSYSPTSP
Sbjct: 650 TSPNYTPTSPSYSPTSP 666
Score = 63.2 bits (152), Expect(2) = 5e-12
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+ P +SP S YSP+ P YSP+S S Y+P
Sbjct: 768 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTGPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 827
Score = 61.2 bits (147), Expect(2) = 5e-12
Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P SP + SP YSPSSP +SP S Y+P+ P YSP+S +Y+P
Sbjct: 698 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPKYSPTS-PKYSP 754
Score = 33.5 bits (75), Expect(2) = 5e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 657 TSPSYSPTSPSYSPTSP 673
Score = 31.6 bits (70), Expect(2) = 5e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 741 TSPKYSPTSPKYSPTSP 757
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 509 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 565
Score = 60.5 bits (145), Expect(2) = 8e-12
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP++P++SP S YSP+ P Y+P+S +Y+P
Sbjct: 740 PTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS-PKYSP 796
Score = 33.5 bits (75), Expect(2) = 8e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 685 TSPSYSPTSPSYSPTSP 701
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 489 SPSYSPTSPAYEPRSP 504
Score = 59.7 bits (143), Expect(2) = 5e-11
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSP++P YSP+SP S SP Y+P+SP++SP+ YSP+ P YSP+S + Y+P
Sbjct: 761 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTGPTYSPTSPKYSPTSPT-YSP 817
Score = 31.6 bits (70), Expect(2) = 5e-11
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 748 TSPKYSPTSPKYSPTSP 764
Score = 57.4 bits (137), Expect(2) = 6e-11
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP Y+P+SP S SP YSP+SP SPS YSPS P Y+P S + YTP
Sbjct: 663 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPSSPRYTPQSPT-YTP 719
Query: 344 QT 339
+
Sbjct: 720 SS 721
Score = 33.5 bits (75), Expect(2) = 6e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 608 TSPSYSPTSPSYSPTSP 624
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 523 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 579
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 511 SPSYSPTSPSYSPTSP 526
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 526 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 585
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 586 PTSPS-YSP 593
Score = 65.1 bits (157), Expect = 3e-09
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN YSP+SP Y+P+SP S SP YSP+SP ++P S YSP+ P YSP+S
Sbjct: 638 PSYSPTSPN---YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 694
Query: 359 SQYTP 345
S Y+P
Sbjct: 695 S-YSP 698
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 507 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 558
Score = 64.7 bits (156), Expect = 4e-09
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + PN S P+SP+YSP+SP S SP YSPSSP+++P S Y+PS P YSPSS
Sbjct: 673 PNYTPTSPNYS---PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 729
Query: 359 SQYTP 345
S Y+P
Sbjct: 730 S-YSP 733
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 516 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 572
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 507 YTPQSPSYSPTSP 519
Score = 60.5 bits (145), Expect = 8e-08
Identities = 30/58 (51%), Positives = 37/58 (63%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+ PTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 782 PTSPVYTPTSPKYSPTGPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 836
Score = 48.5 bits (114), Expect(2) = 9e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 796 PTGPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 853
Score = 31.6 bits (70), Expect(2) = 9e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 762 TSPTYSPTTPKYSPTSP 778
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 554 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 613
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 614 PTSPS-YSP 621
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 582 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 641
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 642 PTSPN-YSP 649
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP+Y+P+SP +SP S YSP+ P Y+
Sbjct: 617 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 676
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 677 PTSPN-YSP 684
[35][TOP]
>UniRef100_P11414 DNA-directed RNA polymerase II subunit RPB1 (Fragment) n=1
Tax=Cricetulus griseus RepID=RPB1_CRIGR
Length = 467
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP + SP+YSP+SP +SP S YSP+ P YSPSS +YTPQ+
Sbjct: 254 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS-PRYTPQS 312
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 199 TSPSYSPTSPSYSPTSP 215
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 156 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 212
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 129 TSPNYSPTSPSYSPTSP 145
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + YTP
Sbjct: 198 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPN-YTP 254
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 143 TSPSYSPTSPSYSPTSP 159
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 177 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 233
Score = 65.1 bits (157), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P SP + SP YSPSSP +SP S Y+P+ P YSPSS +YTP
Sbjct: 296 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSS-PEYTP 352
Score = 35.4 bits (80), Expect(2) = 9e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 276 TSPNYSPTSPSYSPTSP 292
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 136 TSPSYSPTSPSYSPTSP 152
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP ++P S YSP+ P YSP+S + YTP
Sbjct: 219 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPN-YTP 275
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 164 TSPSYSPTSPSYSPTSP 180
Score = 63.5 bits (153), Expect(2) = 6e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ Y+P SPTY+PSSP S SP YSP+SP+++P S YSPS P Y+P+S +Y+P
Sbjct: 303 PSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS-PKYSP 359
Score = 34.3 bits (77), Expect(2) = 6e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ T PSYSPTSP
Sbjct: 248 TSPNYTPTSPSYSPTSP 264
Score = 63.9 bits (154), Expect(2) = 7e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P Y+PSSP+YSPSSP S SP Y+P+SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 310 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS-PKYSP 366
Score = 33.5 bits (75), Expect(2) = 7e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 255 TSPSYSPTSPSYSPTSP 271
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 331 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 387
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 283 TSPSYSPTSPSYSPTSP 299
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 380 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 439
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 353 TSPKYSPTSPKYSPTSP 369
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 107 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 163
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 87 SPSYSPTSPAYEPRSP 102
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 338 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 394
Score = 30.4 bits (67), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS + PSYSPTSP
Sbjct: 318 SSPSYSPSSPSYSPTSP 334
Score = 62.0 bits (149), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 366 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 422
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 332 TSPKYTPTSPSYSPSSP 348
Score = 57.4 bits (137), Expect(2) = 6e-11
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP Y+P+SP S SP YSP+SP SPS YSPS P Y+P S + YTP
Sbjct: 261 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPSSPRYTPQSPT-YTP 317
Query: 344 QT 339
+
Sbjct: 318 SS 319
Score = 33.5 bits (75), Expect(2) = 6e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 206 TSPSYSPTSPSYSPTSP 222
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 121 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 177
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 109 SPSYSPTSPSYSPTSP 124
Score = 59.7 bits (143), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 359 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 415
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P Y+PTSP
Sbjct: 325 SSPSYSPTSPKYTPTSP 341
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 124 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 183
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 184 PTSPS-YSP 191
Score = 65.1 bits (157), Expect = 3e-09
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN YSP+SP Y+P+SP S SP YSP+SP ++P S YSP+ P YSP+S
Sbjct: 236 PSYSPTSPN---YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 292
Query: 359 SQYTP 345
S Y+P
Sbjct: 293 S-YSP 296
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 105 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 156
Score = 64.7 bits (156), Expect = 4e-09
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + PN S P+SP+YSP+SP S SP YSPSSP+++P S Y+PS P YSPSS
Sbjct: 271 PNYTPTSPNYS---PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 327
Query: 359 SQYTP 345
S Y+P
Sbjct: 328 S-YSP 331
Score = 59.3 bits (142), Expect(2) = 2e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 114 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 170
Score = 23.5 bits (49), Expect(2) = 2e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 105 YTPQSPSYSPTSP 117
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 394 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 448
Score = 49.3 bits (116), Expect(2) = 6e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 408 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 465
Score = 31.6 bits (70), Expect(2) = 6e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 360 TSPKYSPTSPKYSPTSP 376
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 152 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 211
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 212 PTSPS-YSP 219
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 180 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 239
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 240 PTSPN-YSP 247
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP+Y+P+SP +SP S YSP+ P Y+
Sbjct: 215 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 274
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 275 PTSPN-YSP 282
[36][TOP]
>UniRef100_UPI000051AA8E PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) n=1 Tax=Apis mellifera
RepID=UPI000051AA8E
Length = 452
Score = 70.1 bits (170), Expect(2) = 1e-14
Identities = 36/58 (62%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSPSSPQ+SP S YSPS P YSP+S S Y+P
Sbjct: 274 PTSPSYSPSSPNYTPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPS-YSP 330
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 219 TSPSYSPTSPSYSPTSP 235
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 190 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 246
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 163 TSPNYSPTSPSYSPTSP 179
Score = 68.6 bits (166), Expect(2) = 3e-14
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPSS + YTP
Sbjct: 232 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPN-YTP 288
Score = 33.5 bits (75), Expect(2) = 3e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 177 TSPSYSPTSPSYSPTSP 193
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 211 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 267
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 32/60 (53%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SPS+ Y+P+ P YSP+S S Y+P +
Sbjct: 246 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPS-YSPSS 304
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 170 TSPSYSPTSPSYSPTSP 186
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 191 TSPSYSPTSPSYSPTSP 207
Score = 65.5 bits (158), Expect(2) = 3e-13
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 8/67 (11%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS-------T 360
P+ YSP+SP+YSP+SP +G SP Y+P+SP +SP S YSP+ P YSPSS +
Sbjct: 316 PSSPKYSPTSPSYSPTSPSFAGTSPQYTPASPTYSPTSPTYSPTSPSYSPSSPQHTASGS 375
Query: 359 SQYTPQT 339
++Y+P +
Sbjct: 376 TRYSPSS 382
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 261 TSPSYSPTSPSYSPTSP 277
Score = 66.2 bits (160), Expect(2) = 2e-12
Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 8/62 (12%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQF--SPSTGYSPSQPGYSPSS------TSQYTP 345
Y+P+SPTYSP+SP S SP YSPSSPQ S ST YSPS P YSP+S + QY+P
Sbjct: 342 YTPASPTYSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYSP 401
Query: 344 QT 339
+
Sbjct: 402 SS 403
Score = 30.0 bits (66), Expect(2) = 2e-12
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSP+SP
Sbjct: 290 SPSYSPTSPSYSPSSP 305
Score = 62.4 bits (150), Expect(2) = 8e-12
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSPSSP YSP+SP S SP YSPSS ++SP S Y+P+ P YSP+S + Y+P
Sbjct: 378 YSPSSPNYSPTSPTYSPTSPQYSPSSTKYSPTSPTYTPTSPSYSPTSPT-YSP 429
Score = 31.6 bits (70), Expect(2) = 8e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSP+SP
Sbjct: 352 TSPTYSPTSPSYSPSSP 368
Score = 60.1 bits (144), Expect(2) = 1e-11
Identities = 32/55 (58%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPS---STSQYTP 345
YSP+SP+YSPSSP S SP YSPSSP++SP+ SPS SPS ++ QYTP
Sbjct: 293 YSPTSPSYSPSSPQYSPASPSYSPSSPKYSPT---SPSYSPTSPSFAGTSPQYTP 344
Score = 33.5 bits (75), Expect(2) = 1e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 240 TSPSYSPTSPSYSPTSP 256
Score = 59.7 bits (143), Expect(2) = 1e-11
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSPSSP YSP+SP S SP YSP+SP +SP S Y+P+ P YSP+S
Sbjct: 295 PTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPASPTYSPTSP 354
Query: 359 SQYTP 345
+ Y+P
Sbjct: 355 T-YSP 358
Score = 33.5 bits (75), Expect(2) = 1e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 247 TSPSYSPTSPSYSPTSP 263
Score = 69.3 bits (168), Expect = 2e-10
Identities = 37/65 (56%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P I+ PN YSP+SPTYSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 144 PSITPSSPN---YSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 200
Query: 359 SQYTP 345
S Y+P
Sbjct: 201 S-YSP 204
Score = 59.3 bits (142), Expect(2) = 2e-10
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P+ YSP+SPTYSP+SP S S YSP+SP ++P S YSP PGYSP+S
Sbjct: 380 PSSPNYSPTSPTYSPTSPQYSPSSTKYSPTSPTYTPTSPSYSPTSPTYSPPVPGYSPTSP 439
Query: 359 SQYTP 345
+ Y+P
Sbjct: 440 T-YSP 443
Score = 30.0 bits (66), Expect(2) = 2e-10
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P+YSPTSP
Sbjct: 346 SPTYSPTSPTYSPTSP 361
Score = 56.2 bits (134), Expect(2) = 2e-10
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYT 348
P+ + YSP+SPTY+P+SP S SP YSP P GYSP+ P YSP+S + T
Sbjct: 401 PSSTKYSPTSPTYTPTSPSYSPTSPTYSP------PVPGYSPTSPTYSPASPAYET 450
Score = 32.7 bits (73), Expect(2) = 2e-10
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SPNYS T P+YSPTSP
Sbjct: 381 SSPNYSPTSPTYSPTSP 397
Score = 67.4 bits (163), Expect = 7e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 158 PTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 217
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 218 PTSPS-YSP 225
Score = 64.3 bits (155), Expect = 6e-09
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P P +PSSP YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S
Sbjct: 134 PTSPAYLPTSPSITPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP 193
Query: 359 SQYTP 345
S Y+P
Sbjct: 194 S-YSP 197
Score = 61.2 bits (147), Expect = 5e-08
Identities = 30/53 (56%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP Y P+SP + SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 132 YSPTSPAYLPTSPSITPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPS-YSP 183
Score = 59.3 bits (142), Expect = 2e-07
Identities = 35/69 (50%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSPSSP ++P S YSP+ P YS
Sbjct: 242 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYS 301
Query: 371 PSSTSQYTP 345
PSS QY+P
Sbjct: 302 PSS-PQYSP 309
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 214 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 273
Query: 371 PSSTSQYTPQT 339
P+S S Y+P +
Sbjct: 274 PTSPS-YSPSS 283
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 186 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 245
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 246 PTSPS-YSP 253
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYS 372
P S P+ S SPS +YSPSSP + SP YSP+SP +SPS+ YSP+ P YS
Sbjct: 256 PSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPSSPQYSPASPSYS 315
Query: 371 PSSTSQYTP 345
PSS +Y+P
Sbjct: 316 PSS-PKYSP 323
Score = 53.5 bits (127), Expect = 1e-05
Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 6/63 (9%)
Frame = -3
Query: 515 PNISIYSPS-----SPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P++S Y S SP+YSP+SP SP +PSSP +SP S YSP+ P YSP+S S
Sbjct: 115 PSMSPYPMSPAGGASPSYSPTSPAYLPTSPSITPSSPNYSPTSPTYSPTSPNYSPTSPS- 173
Query: 353 YTP 345
Y+P
Sbjct: 174 YSP 176
[37][TOP]
>UniRef100_P16356 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
elegans RepID=RPB1_CAEEL
Length = 1852
Score = 69.7 bits (169), Expect(2) = 1e-14
Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSPS P YSPSS S Y+P +
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPS-YSPSS 1672
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1585 TSPHYSPTSPSYSPTSP 1601
Score = 69.3 bits (168), Expect(2) = 2e-14
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP+SP S SP YSP+SP + GYSPS P YSPSS + Y+P
Sbjct: 1677 PTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPT-YSP 1732
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1622 TSPSYSPTSPSYSPTSP 1638
Score = 68.2 bits (165), Expect(2) = 4e-14
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSPSSP +SPS+ YSPS P YSP+S + Y+P
Sbjct: 1628 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPT-YSP 1684
Score = 33.5 bits (75), Expect(2) = 4e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1615 TSPSYSPTSPSYSPTSP 1631
Score = 68.9 bits (167), Expect(2) = 7e-14
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 6/63 (9%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPS-----STSQ 354
P+ YSPSSPTYSP+SP S SP YSP+SPQ+SPS+ Y+PS P Y+P+ S+ Q
Sbjct: 1718 PSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQ 1777
Query: 353 YTP 345
Y+P
Sbjct: 1778 YSP 1780
Score = 32.0 bits (71), Expect(2) = 7e-14
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1678 TSPTYSPTSPTYSPTSP 1694
Score = 68.9 bits (167), Expect(2) = 9e-14
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS+ YSPS P YSPSS +Y+P
Sbjct: 1621 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSS-PRYSP 1677
Score = 31.6 bits (70), Expect(2) = 9e-14
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1609 SPSYSPTSPSYSPTSP 1624
Score = 67.8 bits (164), Expect(2) = 2e-13
Identities = 35/53 (66%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSPSSP YSPSSP S SP YSP+SPQ+SP S YSPS P Y+PSS + Y P
Sbjct: 1716 YSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPT-YNP 1767
Score = 66.2 bits (160), Expect(2) = 2e-13
Identities = 33/54 (61%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 357
P+ YSPSSP+YSPSSP S SP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1656 PSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPS 1709
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1629 TSPSYSPTSPSYSPTSP 1645
Score = 32.0 bits (71), Expect(2) = 2e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1685 TSPTYSPTSPTYSPTSP 1701
Score = 65.5 bits (158), Expect(2) = 3e-13
Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSPSSP+YSPSSP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P +
Sbjct: 1649 PTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPT-YSPTS 1707
Query: 338 NDKDERG 318
+ G
Sbjct: 1708 PSYESGG 1714
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1636 TSPSYSPTSPSYSPTSP 1652
Score = 65.1 bits (157), Expect(2) = 9e-13
Identities = 37/66 (56%), Positives = 44/66 (66%), Gaps = 7/66 (10%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSP-YNSG-----VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 357
P YSP+SPTYSP+SP Y SG SP YSPSSP +SP S YSP+ P YSP+S
Sbjct: 1691 PTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTS-P 1749
Query: 356 QYTPQT 339
QY+P +
Sbjct: 1750 QYSPSS 1755
Score = 32.0 bits (71), Expect(2) = 9e-13
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSP+SP
Sbjct: 1643 TSPSYSPTSPSYSPSSP 1659
Score = 67.8 bits (164), Expect(2) = 2e-12
Identities = 33/55 (60%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPSS S Y+P +
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPS-YSPSS 1665
Score = 28.1 bits (61), Expect(2) = 2e-12
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP +S T P YSPTSP
Sbjct: 1578 SSPQFSMTSPHYSPTSP 1594
Score = 64.3 bits (155), Expect(2) = 4e-12
Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 7/64 (10%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPD------YSPSSPQFSPST-GYSPSQPGYSPSSTS 357
P YSP+SPTYSP+SP S SP YSPSSP++SPS+ YSP+ P YSP+S
Sbjct: 1684 PTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTS-P 1742
Query: 356 QYTP 345
QY+P
Sbjct: 1743 QYSP 1746
Score = 30.4 bits (67), Expect(2) = 4e-12
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + PSYSP+SP
Sbjct: 1650 TSPSYSPSSPSYSPSSP 1666
Score = 62.0 bits (149), Expect(2) = 8e-12
Identities = 33/66 (50%), Positives = 41/66 (62%), Gaps = 7/66 (10%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-------STGYSPSQPGYSPSSTS 357
P YSP+SP YSP+SP S SP Y+PSSP ++P S YSP+ P YSP+S S
Sbjct: 1732 PTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPS 1791
Query: 356 QYTPQT 339
YTP +
Sbjct: 1792 -YTPSS 1796
Score = 32.0 bits (71), Expect(2) = 8e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1692 TSPTYSPTSPTYSPTSP 1708
Score = 60.8 bits (146), Expect(2) = 2e-11
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 8/60 (13%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG--------YSPSQPGYSPSSTSQYTP 345
YSP+SPTYSP+SP + SP YSP+SP ++PS YSP+ P YSPSS + Y+P
Sbjct: 1778 YSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPTYSPSSPT-YSP 1836
Score = 32.0 bits (71), Expect(2) = 2e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P YSPTSP
Sbjct: 1733 TSPSYSPTSPQYSPTSP 1749
Score = 61.6 bits (148), Expect(2) = 3e-11
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
P+ YSP+SPTY+PS G S YSP+SP +SPS+ YSP+ P YSPSS + Y P +
Sbjct: 1794 PSSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPTYSPSSPTYSPASPSYSPSSPT-YDPNS 1852
Score = 30.4 bits (67), Expect(2) = 3e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T P+YSPTSP
Sbjct: 1774 SSPQYSPTSPTYSPTSP 1790
Score = 56.6 bits (135), Expect(2) = 4e-10
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 7/64 (10%)
Frame = -3
Query: 515 PNISIYSP------SSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 357
P+ Y+P SSP YSP+SP S SP Y+PSSPQ+SP S Y+PS P P +++
Sbjct: 1760 PSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPS-PSEQPGTSA 1818
Query: 356 QYTP 345
QY+P
Sbjct: 1819 QYSP 1822
Score = 31.6 bits (70), Expect(2) = 4e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T PSYSPTSP
Sbjct: 1726 SSPTYSPTSPSYSPTSP 1742
Score = 62.8 bits (151), Expect = 2e-08
Identities = 31/54 (57%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
SP SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P +
Sbjct: 1606 SPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPSS 1658
Score = 58.2 bits (139), Expect = 4e-07
Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Frame = -3
Query: 503 IYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
+YSPSSP +S +SP+ S SP YSP+SP Q S YSP+ P YSP+S S Y+P
Sbjct: 1574 VYSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPS-YSP 1628
Score = 56.2 bits (134), Expect = 2e-06
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSPSSP +SPS+ YSP+ P YS
Sbjct: 1624 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYS 1683
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1684 PTSPT-YSP 1691
Score = 53.9 bits (128), Expect = 8e-06
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Frame = -3
Query: 515 PNISIYSPSSP-TYSPSSPYNSGVSPDYSPSSPQFSPST---GYSPSQPGYSPSSTSQYT 348
P Y SP YSPSSP S SP YSP+SP +SP++ G SP P YSP+S S Y+
Sbjct: 1562 PRTPSYGGMSPGVYSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPS-YS 1620
Query: 347 P 345
P
Sbjct: 1621 P 1621
[38][TOP]
>UniRef100_B5RSM9 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RSM9_DEBHA
Length = 1749
Score = 69.7 bits (169), Expect(2) = 1e-14
Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP S S Y+P++
Sbjct: 1679 PTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPGSPS-YSPES 1737
Query: 338 NDKDERGK 315
K + K
Sbjct: 1738 ESKSKDEK 1745
Score = 33.5 bits (75), Expect(2) = 1e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1624 TSPSYSPTSPSYSPTSP 1640
Score = 68.2 bits (165), Expect(2) = 4e-14
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S S Y+P
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPS-YSP 1707
Score = 33.5 bits (75), Expect(2) = 4e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1596 TSPSYSPTSPSYSPTSP 1612
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/62 (53%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SPQ+SP S YSP P YSP S S+ +
Sbjct: 1686 PTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPGSPSYSPESESKSKDEK 1745
Query: 338 ND 333
D
Sbjct: 1746 KD 1747
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1631 TSPSYSPTSPSYSPTSP 1647
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1581 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1637
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1602 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1658
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1623 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1679
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1561 TSPSYSPTSPSYSPTSP 1577
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1568 TSPSYSPTSPSYSPTSP 1584
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1575 TSPSYSPTSPSYSPTSP 1591
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 10/75 (13%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP-- 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1672 PTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTS-PQYSPGS 1730
Query: 344 -------QTNDKDER 321
++ KDE+
Sbjct: 1731 PSYSPESESKSKDEK 1745
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1617 TSPSYSPTSPSYSPTSP 1633
Score = 65.5 bits (158), Expect(2) = 3e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1644 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPS-YSP 1700
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1589 TSPSYSPTSPSYSPTSP 1605
Score = 67.0 bits (162), Expect(2) = 7e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1560 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1616
Score = 30.4 bits (67), Expect(2) = 7e-13
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y T P+YSPTSP
Sbjct: 1547 TSPGYGGTSPTYSPTSP 1563
Score = 59.3 bits (142), Expect(2) = 2e-11
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S QY+P
Sbjct: 1665 PTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPS--YSPTSPQYSPTS-PQYSP 1721
Score = 33.5 bits (75), Expect(2) = 2e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1610 TSPSYSPTSPSYSPTSP 1626
Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1558 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1609
Score = 62.8 bits (151), Expect = 2e-08
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y +SPTYSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1551 YGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1602
Score = 60.1 bits (144), Expect = 1e-07
Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SPQ+SP S YSP+ P YS
Sbjct: 1647 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYS 1706
Query: 371 PSSTSQYTP 345
P+S QY+P
Sbjct: 1707 PTS-PQYSP 1714
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1619 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1678
Query: 371 PSSTSQYTP 345
P+S QY+P
Sbjct: 1679 PTS-PQYSP 1686
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1563 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1622
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1623 PTSPS-YSP 1630
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1598 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1657
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1658 PTSPS-YSP 1665
Score = 57.4 bits (137), Expect = 7e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1556 PTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1615
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1616 PTSPS-YSP 1623
[39][TOP]
>UniRef100_UPI0000E48671 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48671
Length = 1921
Score = 69.3 bits (168), Expect(2) = 2e-14
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SPS+ YSP+ P YSP+S S Y+PQ+
Sbjct: 1725 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPS-YSPQS 1783
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1670 TSPSYSPTSPSYSPTSP 1686
Score = 68.2 bits (165), Expect(2) = 4e-14
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSPSSP++SP S YSP+ P YSP S S Y+P
Sbjct: 1732 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPS-YSP 1788
Score = 33.5 bits (75), Expect(2) = 4e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1677 TSPSYSPTSPSYSPTSP 1693
Score = 67.8 bits (164), Expect(2) = 5e-14
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
P YSPSSP YSP+SP S SP YSP+SP FSPS+ YSP+ P YSP+S +Y+P +
Sbjct: 1788 PGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTS-PKYSPSS 1846
Score = 33.5 bits (75), Expect(2) = 5e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1733 TSPSYSPTSPSYSPTSP 1749
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1655 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1711
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1676 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1732
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1697 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1753
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1635 TSPSYSPTSPSYSPTSP 1651
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1642 TSPSYSPTSPSYSPTSP 1658
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1649 TSPSYSPTSPSYSPTSP 1665
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP SP+YSPSSP S SP YSP+SP +SP S +SPS P YSP+S S Y+P
Sbjct: 1781 PQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPS-YSP 1837
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1726 TSPSYSPTSPSYSPTSP 1742
Score = 65.5 bits (158), Expect(2) = 3e-13
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP P YSP S S Y+P +
Sbjct: 1739 PTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPS-YSPSS 1797
Score = 65.5 bits (158), Expect(2) = 3e-13
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 13/77 (16%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-----------TGYSPSQPGYSP 369
P+ YSP+SPTYSP+SP S SP YSP+SP++SPS + YSP+ P YSP
Sbjct: 1844 PSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSPTSPSYSP 1903
Query: 368 SST--SQYTPQTNDKDE 324
+S S +P D DE
Sbjct: 1904 TSPSYSPTSPGMGDDDE 1920
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1684 TSPSYSPTSPSYSPTSP 1700
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1803 TSPSYSPTSPSYSPTSP 1819
Score = 67.0 bits (162), Expect(2) = 4e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1634 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1690
Score = 64.7 bits (156), Expect(2) = 4e-13
Identities = 31/52 (59%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P YSP+SP+YSP SP S SP YSPSSP++SP S YSP+ P YSP+S
Sbjct: 1767 PTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTS 1818
Score = 33.5 bits (75), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1712 TSPSYSPTSPSYSPTSP 1728
Score = 31.2 bits (69), Expect(2) = 4e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS PSYSPTSP
Sbjct: 1621 TSPGYSPASPSYSPTSP 1637
Score = 66.2 bits (160), Expect(2) = 7e-13
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1625 YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1676
Score = 31.2 bits (69), Expect(2) = 7e-13
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T PSYSPTSP
Sbjct: 1608 SPGYSPTSPSYSPTSP 1623
Score = 65.1 bits (157), Expect(2) = 1e-12
Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSPSSP YSP+SP S SP YSP+SP +SP S YSPS P YSP+S S Y+P
Sbjct: 1837 PTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSP 1896
Score = 31.6 bits (70), Expect(2) = 1e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T PSYSPTSP
Sbjct: 1796 SSPKYSPTSPSYSPTSP 1812
Score = 59.3 bits (142), Expect(2) = 2e-11
Identities = 35/60 (58%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSPSSP YSP+SP S SP YSP SP SPS YSPS P YSP+S S Y+P
Sbjct: 1753 PTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPS--YSPSSPKYSPTSPS-YSP 1809
Score = 33.5 bits (75), Expect(2) = 2e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1698 TSPSYSPTSPSYSPTSP 1714
Score = 65.9 bits (159), Expect(2) = 5e-11
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1611 YSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1662
Score = 25.4 bits (54), Expect(2) = 5e-11
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS PSY P SP
Sbjct: 1588 SPSYSPASPSYLPASP 1603
Score = 67.4 bits (163), Expect = 7e-10
Identities = 37/65 (56%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN +SPSSPTYSP+SP S SP YSPSSP++SP S YSP+ P YSP+S
Sbjct: 1812 PSYSPTSPN---FSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASP 1868
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1869 T-YSP 1872
Score = 65.9 bits (159), Expect = 2e-09
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1613 PTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1669
Score = 63.2 bits (152), Expect = 1e-08
Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYS 372
P S P+ S YSP+SP +SPSSP S SP YSP+SP++SPS+ YSP+ P YS
Sbjct: 1798 PKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYS 1857
Query: 371 PSSTSQYTP 345
P+S +Y+P
Sbjct: 1858 PTS-PKYSP 1865
Score = 60.5 bits (145), Expect = 8e-08
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+P SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1605 TPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPS-YSP 1655
Score = 58.5 bits (140), Expect = 3e-07
Identities = 35/69 (50%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSPSSP S SP YSP+SP +SP S YSP P YS
Sbjct: 1735 PSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYS 1794
Query: 371 PSSTSQYTP 345
PSS +Y+P
Sbjct: 1795 PSS-PKYSP 1802
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1693 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1752
Query: 371 PSSTSQYTPQT 339
P+S S Y+P +
Sbjct: 1753 PTSPS-YSPSS 1762
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1630 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1689
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1690 PTSPS-YSP 1697
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1658 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1717
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1718 PTSPS-YSP 1725
Score = 57.4 bits (137), Expect = 7e-07
Identities = 34/69 (49%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1616 PSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1675
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1676 PTSPS-YSP 1683
Score = 56.2 bits (134), Expect = 2e-06
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 7/59 (11%)
Frame = -3
Query: 500 YSPSSPTY---SPSSPYNSG---VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+Y SP++P + G SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1591 YSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPS-YSP 1648
[40][TOP]
>UniRef100_UPI0000E48672 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48672
Length = 1913
Score = 69.3 bits (168), Expect(2) = 2e-14
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SPS+ YSP+ P YSP+S S Y+PQ+
Sbjct: 1717 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPS-YSPQS 1775
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1662 TSPSYSPTSPSYSPTSP 1678
Score = 68.2 bits (165), Expect(2) = 4e-14
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSPSSP++SP S YSP+ P YSP S S Y+P
Sbjct: 1724 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPS-YSP 1780
Score = 33.5 bits (75), Expect(2) = 4e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1669 TSPSYSPTSPSYSPTSP 1685
Score = 67.8 bits (164), Expect(2) = 5e-14
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
P YSPSSP YSP+SP S SP YSP+SP FSPS+ YSP+ P YSP+S +Y+P +
Sbjct: 1780 PGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTS-PKYSPSS 1838
Score = 33.5 bits (75), Expect(2) = 5e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1725 TSPSYSPTSPSYSPTSP 1741
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1647 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1703
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1668 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1724
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1689 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1745
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1627 TSPSYSPTSPSYSPTSP 1643
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1634 TSPSYSPTSPSYSPTSP 1650
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1641 TSPSYSPTSPSYSPTSP 1657
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP SP+YSPSSP S SP YSP+SP +SP S +SPS P YSP+S S Y+P
Sbjct: 1773 PQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPS-YSP 1829
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1718 TSPSYSPTSPSYSPTSP 1734
Score = 65.5 bits (158), Expect(2) = 3e-13
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP P YSP S S Y+P +
Sbjct: 1731 PTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPS-YSPSS 1789
Score = 65.5 bits (158), Expect(2) = 3e-13
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 13/77 (16%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-----------TGYSPSQPGYSP 369
P+ YSP+SPTYSP+SP S SP YSP+SP++SPS + YSP+ P YSP
Sbjct: 1836 PSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSPTSPSYSP 1895
Query: 368 SST--SQYTPQTNDKDE 324
+S S +P D DE
Sbjct: 1896 TSPSYSPTSPGMGDDDE 1912
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1676 TSPSYSPTSPSYSPTSP 1692
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1795 TSPSYSPTSPSYSPTSP 1811
Score = 67.0 bits (162), Expect(2) = 4e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1626 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1682
Score = 64.7 bits (156), Expect(2) = 4e-13
Identities = 31/52 (59%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P YSP+SP+YSP SP S SP YSPSSP++SP S YSP+ P YSP+S
Sbjct: 1759 PTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTS 1810
Score = 33.5 bits (75), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1704 TSPSYSPTSPSYSPTSP 1720
Score = 31.2 bits (69), Expect(2) = 4e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS PSYSPTSP
Sbjct: 1613 TSPGYSPASPSYSPTSP 1629
Score = 66.2 bits (160), Expect(2) = 7e-13
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1617 YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1668
Score = 31.2 bits (69), Expect(2) = 7e-13
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T PSYSPTSP
Sbjct: 1600 SPGYSPTSPSYSPTSP 1615
Score = 65.1 bits (157), Expect(2) = 1e-12
Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSPSSP YSP+SP S SP YSP+SP +SP S YSPS P YSP+S S Y+P
Sbjct: 1829 PTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSP 1888
Score = 31.6 bits (70), Expect(2) = 1e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T PSYSPTSP
Sbjct: 1788 SSPKYSPTSPSYSPTSP 1804
Score = 59.3 bits (142), Expect(2) = 2e-11
Identities = 35/60 (58%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSPSSP YSP+SP S SP YSP SP SPS YSPS P YSP+S S Y+P
Sbjct: 1745 PTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPS--YSPSSPKYSPTSPS-YSP 1801
Score = 33.5 bits (75), Expect(2) = 2e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1690 TSPSYSPTSPSYSPTSP 1706
Score = 65.9 bits (159), Expect(2) = 5e-11
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1603 YSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1654
Score = 25.4 bits (54), Expect(2) = 5e-11
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS PSY P SP
Sbjct: 1580 SPSYSPASPSYLPASP 1595
Score = 67.4 bits (163), Expect = 7e-10
Identities = 37/65 (56%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN +SPSSPTYSP+SP S SP YSPSSP++SP S YSP+ P YSP+S
Sbjct: 1804 PSYSPTSPN---FSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASP 1860
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1861 T-YSP 1864
Score = 65.9 bits (159), Expect = 2e-09
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1605 PTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1661
Score = 63.2 bits (152), Expect = 1e-08
Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYS 372
P S P+ S YSP+SP +SPSSP S SP YSP+SP++SPS+ YSP+ P YS
Sbjct: 1790 PKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYS 1849
Query: 371 PSSTSQYTP 345
P+S +Y+P
Sbjct: 1850 PTS-PKYSP 1857
Score = 60.5 bits (145), Expect = 8e-08
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+P SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1597 TPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPS-YSP 1647
Score = 58.5 bits (140), Expect = 3e-07
Identities = 35/69 (50%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSPSSP S SP YSP+SP +SP S YSP P YS
Sbjct: 1727 PSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYS 1786
Query: 371 PSSTSQYTP 345
PSS +Y+P
Sbjct: 1787 PSS-PKYSP 1794
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1685 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1744
Query: 371 PSSTSQYTPQT 339
P+S S Y+P +
Sbjct: 1745 PTSPS-YSPSS 1754
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1622 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1681
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1682 PTSPS-YSP 1689
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1650 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1709
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1710 PTSPS-YSP 1717
Score = 57.4 bits (137), Expect = 7e-07
Identities = 34/69 (49%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1608 PSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1667
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1668 PTSPS-YSP 1675
Score = 56.2 bits (134), Expect = 2e-06
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 7/59 (11%)
Frame = -3
Query: 500 YSPSSPTY---SPSSPYNSG---VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+Y SP++P + G SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1583 YSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPS-YSP 1640
[41][TOP]
>UniRef100_UPI0000E48673 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48673
Length = 1880
Score = 69.3 bits (168), Expect(2) = 2e-14
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SPS+ YSP+ P YSP+S S Y+PQ+
Sbjct: 1684 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPS-YSPQS 1742
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1629 TSPSYSPTSPSYSPTSP 1645
Score = 68.2 bits (165), Expect(2) = 4e-14
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSPSSP++SP S YSP+ P YSP S S Y+P
Sbjct: 1691 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPS-YSP 1747
Score = 33.5 bits (75), Expect(2) = 4e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1636 TSPSYSPTSPSYSPTSP 1652
Score = 67.8 bits (164), Expect(2) = 5e-14
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
P YSPSSP YSP+SP S SP YSP+SP FSPS+ YSP+ P YSP+S +Y+P +
Sbjct: 1747 PGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTS-PKYSPSS 1805
Score = 33.5 bits (75), Expect(2) = 5e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1692 TSPSYSPTSPSYSPTSP 1708
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1670
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1635 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1691
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1656 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1712
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1594 TSPSYSPTSPSYSPTSP 1610
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1601 TSPSYSPTSPSYSPTSP 1617
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1608 TSPSYSPTSPSYSPTSP 1624
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP SP+YSPSSP S SP YSP+SP +SP S +SPS P YSP+S S Y+P
Sbjct: 1740 PQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPS-YSP 1796
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1685 TSPSYSPTSPSYSPTSP 1701
Score = 65.5 bits (158), Expect(2) = 3e-13
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP P YSP S S Y+P +
Sbjct: 1698 PTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPS-YSPSS 1756
Score = 65.5 bits (158), Expect(2) = 3e-13
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 13/77 (16%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-----------TGYSPSQPGYSP 369
P+ YSP+SPTYSP+SP S SP YSP+SP++SPS + YSP+ P YSP
Sbjct: 1803 PSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSPTSPSYSP 1862
Query: 368 SST--SQYTPQTNDKDE 324
+S S +P D DE
Sbjct: 1863 TSPSYSPTSPGMGDDDE 1879
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1643 TSPSYSPTSPSYSPTSP 1659
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1762 TSPSYSPTSPSYSPTSP 1778
Score = 67.0 bits (162), Expect(2) = 4e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1593 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1649
Score = 64.7 bits (156), Expect(2) = 4e-13
Identities = 31/52 (59%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P YSP+SP+YSP SP S SP YSPSSP++SP S YSP+ P YSP+S
Sbjct: 1726 PTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTS 1777
Score = 33.5 bits (75), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1671 TSPSYSPTSPSYSPTSP 1687
Score = 31.2 bits (69), Expect(2) = 4e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS PSYSPTSP
Sbjct: 1580 TSPGYSPASPSYSPTSP 1596
Score = 66.2 bits (160), Expect(2) = 7e-13
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1584 YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1635
Score = 31.2 bits (69), Expect(2) = 7e-13
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T PSYSPTSP
Sbjct: 1567 SPGYSPTSPSYSPTSP 1582
Score = 65.1 bits (157), Expect(2) = 1e-12
Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSPSSP YSP+SP S SP YSP+SP +SP S YSPS P YSP+S S Y+P
Sbjct: 1796 PTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSP 1855
Score = 31.6 bits (70), Expect(2) = 1e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T PSYSPTSP
Sbjct: 1755 SSPKYSPTSPSYSPTSP 1771
Score = 59.3 bits (142), Expect(2) = 2e-11
Identities = 35/60 (58%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSPSSP YSP+SP S SP YSP SP SPS YSPS P YSP+S S Y+P
Sbjct: 1712 PTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPS--YSPSSPKYSPTSPS-YSP 1768
Score = 33.5 bits (75), Expect(2) = 2e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1657 TSPSYSPTSPSYSPTSP 1673
Score = 67.4 bits (163), Expect = 7e-10
Identities = 37/65 (56%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN +SPSSPTYSP+SP S SP YSPSSP++SP S YSP+ P YSP+S
Sbjct: 1771 PSYSPTSPN---FSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASP 1827
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1828 T-YSP 1831
Score = 65.9 bits (159), Expect = 2e-09
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1570 YSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1621
Score = 65.9 bits (159), Expect = 2e-09
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1572 PTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1628
Score = 63.2 bits (152), Expect = 1e-08
Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYS 372
P S P+ S YSP+SP +SPSSP S SP YSP+SP++SPS+ YSP+ P YS
Sbjct: 1757 PKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYS 1816
Query: 371 PSSTSQYTP 345
P+S +Y+P
Sbjct: 1817 PTS-PKYSP 1824
Score = 58.5 bits (140), Expect = 3e-07
Identities = 35/69 (50%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSPSSP S SP YSP+SP +SP S YSP P YS
Sbjct: 1694 PSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYS 1753
Query: 371 PSSTSQYTP 345
PSS +Y+P
Sbjct: 1754 PSS-PKYSP 1761
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1652 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1711
Query: 371 PSSTSQYTPQT 339
P+S S Y+P +
Sbjct: 1712 PTSPS-YSPSS 1721
Score = 57.8 bits (138), Expect = 5e-07
Identities = 31/54 (57%), Positives = 38/54 (70%), Gaps = 3/54 (5%)
Frame = -3
Query: 497 SPSSPT--YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
SP SP+ YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1562 SPGSPSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPS-YSP 1614
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1589 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1648
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1649 PTSPS-YSP 1656
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1617 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1676
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1677 PTSPS-YSP 1684
Score = 57.4 bits (137), Expect = 7e-07
Identities = 34/69 (49%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1575 PSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1634
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1635 PTSPS-YSP 1642
[42][TOP]
>UniRef100_C4YN85 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=C4YN85_CANAL
Length = 1742
Score = 69.3 bits (168), Expect(2) = 2e-14
Identities = 36/65 (55%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP S Y P+
Sbjct: 1678 PTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPGSPG-YEPEP 1736
Query: 338 NDKDE 324
KDE
Sbjct: 1737 PKKDE 1741
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1630 TSPSYSPTSPSYSPTSP 1646
Score = 68.9 bits (167), Expect(2) = 2e-14
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1657 PTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTS-PQYSP 1713
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1637 TSPSYSPTSPSYSPTSP 1653
Score = 67.8 bits (164), Expect(2) = 7e-14
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 PTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPS-YSP 1699
Score = 33.1 bits (74), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1623 TSPQYSPTSPSYSPTSP 1639
Score = 67.4 bits (163), Expect(2) = 2e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S S Y+P
Sbjct: 1594 PTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPS-YSP 1650
Score = 32.3 bits (72), Expect(2) = 2e-13
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSY+PTSP
Sbjct: 1546 TSPSYSPTSPSYAPTSP 1562
Score = 67.8 bits (164), Expect(2) = 3e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1608 PTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPS-YSP 1664
Score = 66.6 bits (161), Expect(2) = 3e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1636 PTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTS-PQYSP 1692
Score = 32.3 bits (72), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1609 TSPAYSPTSPSYSPTSP 1625
Score = 31.2 bits (69), Expect(2) = 3e-13
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+Y+ T P+YSPTSP
Sbjct: 1553 TSPSYAPTSPAYSPTSP 1569
Score = 65.5 bits (158), Expect(2) = 7e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1629 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPS-YSP 1685
Score = 32.0 bits (71), Expect(2) = 7e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P YSPTSP
Sbjct: 1616 TSPSYSPTSPQYSPTSP 1632
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+Y+P+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1587 PTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPS-YSP 1643
Score = 31.2 bits (69), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSY+PTSP
Sbjct: 1560 TSPAYSPTSPSYAPTSP 1576
Score = 62.4 bits (150), Expect(2) = 1e-11
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP YSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1580 PTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPS-YSP 1636
Score = 31.2 bits (69), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+Y+ T P+YSPTSP
Sbjct: 1567 TSPSYAPTSPAYSPTSP 1583
Score = 62.4 bits (150), Expect(2) = 8e-11
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+Y+P+SP S SP Y+P+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1559 PTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPA-YSP 1615
Score = 28.1 bits (61), Expect(2) = 8e-11
Identities = 14/19 (73%), Positives = 14/19 (73%), Gaps = 2/19 (10%)
Frame = -1
Query: 553 TSPNY--SXTFPSYSPTSP 503
TSP Y S T PSYSPTSP
Sbjct: 1537 TSPGYGYSPTSPSYSPTSP 1555
Score = 57.4 bits (137), Expect(2) = 3e-10
Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SP+ YSP+ P YSP+S S Y+P
Sbjct: 1615 PTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPA--YSPTSPSYSPTSPS-YSP 1671
Score = 31.2 bits (69), Expect(2) = 3e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSY+PTSP
Sbjct: 1574 TSPAYSPTSPSYAPTSP 1590
Score = 62.8 bits (151), Expect(2) = 1e-09
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+Y+P+SP S SP Y+P+SP +SP S Y+P+ P YSP+S S Y P
Sbjct: 1545 PTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPS-YAP 1601
Score = 23.9 bits (50), Expect(2) = 1e-09
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ YSPTSP
Sbjct: 1532 TSPGYTSPGYGYSPTSP 1548
Score = 60.8 bits (146), Expect = 6e-08
Identities = 28/53 (52%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP + SP YSP+SP ++P S YSP+ P Y+P+S + Y+P
Sbjct: 1543 YSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPA-YSP 1594
Score = 56.2 bits (134), Expect = 2e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SP+ +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1639 PSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYS 1698
Query: 371 PSSTSQYTP 345
P+S QY+P
Sbjct: 1699 PTS-PQYSP 1706
[43][TOP]
>UniRef100_B9WN64 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9WN64_CANDC
Length = 1735
Score = 69.3 bits (168), Expect(2) = 2e-14
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S GYSP+ P YSP+S S Y+P
Sbjct: 1587 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPS-YSP 1643
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1546 TSPSYSPTSPSYSPTSP 1562
Score = 68.6 bits (166), Expect(2) = 3e-14
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 PTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPS-YSP 1699
Score = 68.6 bits (166), Expect(2) = 3e-14
Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP S Y P++
Sbjct: 1671 PTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPTSPRYSPGSPG-YEPKS 1729
Query: 338 NDKD 327
KD
Sbjct: 1730 PKKD 1733
Score = 33.5 bits (75), Expect(2) = 3e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1588 TSPSYSPTSPSYSPTSP 1604
Score = 33.5 bits (75), Expect(2) = 3e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1630 TSPSYSPTSPSYSPTSP 1646
Score = 68.2 bits (165), Expect(2) = 4e-14
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S S Y+P
Sbjct: 1629 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPS-YSP 1685
Score = 33.5 bits (75), Expect(2) = 4e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1574 TSPSYSPTSPSYSPTSP 1590
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1566 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1622
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1608 PTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS-PQYSP 1664
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1553 TSPSYSPTSPSYSPTSP 1569
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1560 TSPSYSPTSPSYSPTSP 1576
Score = 67.0 bits (162), Expect(2) = 6e-11
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1545 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1601
Score = 57.4 bits (137), Expect(2) = 6e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1615 PTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPQYSPTSPS-YSP 1671
Score = 33.5 bits (75), Expect(2) = 6e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1567 TSPSYSPTSPSYSPTSP 1583
Score = 23.9 bits (50), Expect(2) = 6e-11
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ YSPTSP
Sbjct: 1532 TSPGYASPGYGYSPTSP 1548
Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1543 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1594
Score = 64.7 bits (156), Expect = 4e-09
Identities = 36/69 (52%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1639 PSYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYS 1698
Query: 371 PSSTSQYTP 345
P+S QY+P
Sbjct: 1699 PTS-PQYSP 1706
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1548 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1607
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1608 PTSPS-YSP 1615
Score = 57.0 bits (136), Expect = 9e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1583 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYS 1642
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1643 PTSPS-YSP 1650
Score = 57.0 bits (136), Expect = 9e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1625 PGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYS 1684
Query: 371 PSSTSQYTP 345
P+S QY+P
Sbjct: 1685 PTS-PQYSP 1692
[44][TOP]
>UniRef100_C8Z6G2 Rpo21p n=1 Tax=Saccharomyces cerevisiae EC1118 RepID=C8Z6G2_YEAST
Length = 1733
Score = 69.3 bits (168), Expect(2) = 2e-14
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ PGYSP S + Y+P+
Sbjct: 1663 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPA-YSPKQ 1721
Query: 338 NDK 330
+++
Sbjct: 1722 DEQ 1724
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1608 TSPSYSPTSPSYSPTSP 1624
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1572 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1628
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1593 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1649
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPS-YSP 1670
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1559 TSPSYSPTSPSYSPTSP 1575
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1566 TSPSYSPTSPSYSPTSP 1582
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1573 TSPSYSPTSPSYSPTSP 1589
Score = 66.2 bits (160), Expect(2) = 2e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1635 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1691
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1580 TSPSYSPTSPSYSPTSP 1596
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1642 PTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1698
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1587 TSPSYSPTSPSYSPTSP 1603
Score = 67.4 bits (163), Expect(2) = 2e-12
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1551 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1607
Score = 28.9 bits (63), Expect(2) = 2e-12
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP +S T P+YSPTSP
Sbjct: 1538 SSPGFSPTSPTYSPTSP 1554
Score = 67.0 bits (162), Expect(2) = 2e-11
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1544 PTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1600
Score = 58.9 bits (141), Expect(2) = 2e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1649 PTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPNYSPTSPS-YSP 1705
Score = 33.5 bits (75), Expect(2) = 2e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1594 TSPSYSPTSPSYSPTSP 1610
Score = 25.4 bits (54), Expect(2) = 2e-11
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP + + P +SPTSP
Sbjct: 1531 TSPGFGVSSPGFSPTSP 1547
Score = 55.8 bits (133), Expect(2) = 2e-10
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1621 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1680
Query: 359 SQYTP 345
S Y+P
Sbjct: 1681 S-YSP 1684
Score = 33.5 bits (75), Expect(2) = 2e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1601 TSPSYSPTSPSYSPTSP 1617
Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+SP+SPTYSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1593
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1568 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1627
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1628 PTSPS-YSP 1635
Score = 57.4 bits (137), Expect = 7e-07
Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+ SSP +SP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1586
Score = 57.0 bits (136), Expect = 9e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1554 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1613
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1614 PTSPS-YSP 1621
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1596 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1655
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1656 PTSPA-YSP 1663
Score = 56.6 bits (135), Expect = 1e-06
Identities = 32/66 (48%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP+YSP+SP +SP S GYSP P YS
Sbjct: 1659 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYS 1718
Query: 371 PSSTSQ 354
P Q
Sbjct: 1719 PKQDEQ 1724
Score = 54.3 bits (129), Expect = 6e-06
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+P+SP + SSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPS-YSP 1579
[45][TOP]
>UniRef100_C7GKZ2 Rpo21p n=2 Tax=Saccharomyces cerevisiae RepID=C7GKZ2_YEAS2
Length = 1733
Score = 69.3 bits (168), Expect(2) = 2e-14
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ PGYSP S + Y+P+
Sbjct: 1663 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPA-YSPKQ 1721
Query: 338 NDK 330
+++
Sbjct: 1722 DEQ 1724
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1608 TSPSYSPTSPSYSPTSP 1624
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1572 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1628
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1593 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1649
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPS-YSP 1670
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1559 TSPSYSPTSPSYSPTSP 1575
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1566 TSPSYSPTSPSYSPTSP 1582
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1573 TSPSYSPTSPSYSPTSP 1589
Score = 66.2 bits (160), Expect(2) = 2e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1635 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1691
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1580 TSPSYSPTSPSYSPTSP 1596
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1642 PTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1698
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1587 TSPSYSPTSPSYSPTSP 1603
Score = 67.4 bits (163), Expect(2) = 2e-12
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1551 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1607
Score = 28.9 bits (63), Expect(2) = 2e-12
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP +S T P+YSPTSP
Sbjct: 1538 SSPGFSPTSPTYSPTSP 1554
Score = 67.0 bits (162), Expect(2) = 2e-11
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1544 PTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1600
Score = 58.9 bits (141), Expect(2) = 2e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1649 PTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPNYSPTSPS-YSP 1705
Score = 33.5 bits (75), Expect(2) = 2e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1594 TSPSYSPTSPSYSPTSP 1610
Score = 25.4 bits (54), Expect(2) = 2e-11
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP + + P +SPTSP
Sbjct: 1531 TSPGFGVSSPGFSPTSP 1547
Score = 55.8 bits (133), Expect(2) = 2e-10
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1621 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1680
Query: 359 SQYTP 345
S Y+P
Sbjct: 1681 S-YSP 1684
Score = 33.5 bits (75), Expect(2) = 2e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1601 TSPSYSPTSPSYSPTSP 1617
Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+SP+SPTYSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1593
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1568 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1627
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1628 PTSPS-YSP 1635
Score = 57.4 bits (137), Expect = 7e-07
Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+ SSP +SP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1586
Score = 57.0 bits (136), Expect = 9e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1554 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1613
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1614 PTSPS-YSP 1621
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1596 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1655
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1656 PTSPA-YSP 1663
Score = 56.6 bits (135), Expect = 1e-06
Identities = 32/66 (48%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP+YSP+SP +SP S GYSP P YS
Sbjct: 1659 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYS 1718
Query: 371 PSSTSQ 354
P Q
Sbjct: 1719 PKQDEQ 1724
Score = 54.3 bits (129), Expect = 6e-06
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+P+SP + SSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPS-YSP 1579
[46][TOP]
>UniRef100_B3LH31 DNA-directed RNA polymerase n=1 Tax=Saccharomyces cerevisiae RM11-1a
RepID=B3LH31_YEAS1
Length = 1733
Score = 69.3 bits (168), Expect(2) = 2e-14
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ PGYSP S + Y+P+
Sbjct: 1663 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPA-YSPKQ 1721
Query: 338 NDK 330
+++
Sbjct: 1722 DEQ 1724
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1608 TSPSYSPTSPSYSPTSP 1624
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1572 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1628
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1593 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1649
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPS-YSP 1670
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1559 TSPSYSPTSPSYSPTSP 1575
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1566 TSPSYSPTSPSYSPTSP 1582
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1573 TSPSYSPTSPSYSPTSP 1589
Score = 66.2 bits (160), Expect(2) = 2e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1635 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1691
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1580 TSPSYSPTSPSYSPTSP 1596
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1642 PTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1698
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1587 TSPSYSPTSPSYSPTSP 1603
Score = 67.4 bits (163), Expect(2) = 2e-12
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1551 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1607
Score = 28.9 bits (63), Expect(2) = 2e-12
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP +S T P+YSPTSP
Sbjct: 1538 SSPGFSPTSPTYSPTSP 1554
Score = 67.0 bits (162), Expect(2) = 2e-11
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1544 PTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1600
Score = 58.9 bits (141), Expect(2) = 2e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1649 PTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPNYSPTSPS-YSP 1705
Score = 33.5 bits (75), Expect(2) = 2e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1594 TSPSYSPTSPSYSPTSP 1610
Score = 25.4 bits (54), Expect(2) = 2e-11
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP + + P +SPTSP
Sbjct: 1531 TSPGFGVSSPGFSPTSP 1547
Score = 55.8 bits (133), Expect(2) = 2e-10
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1621 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1680
Query: 359 SQYTP 345
S Y+P
Sbjct: 1681 S-YSP 1684
Score = 33.5 bits (75), Expect(2) = 2e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1601 TSPSYSPTSPSYSPTSP 1617
Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+SP+SPTYSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1593
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1568 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1627
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1628 PTSPS-YSP 1635
Score = 57.4 bits (137), Expect = 7e-07
Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+ SSP +SP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1586
Score = 57.0 bits (136), Expect = 9e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1554 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1613
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1614 PTSPS-YSP 1621
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1596 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1655
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1656 PTSPA-YSP 1663
Score = 56.6 bits (135), Expect = 1e-06
Identities = 32/66 (48%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP+YSP+SP +SP S GYSP P YS
Sbjct: 1659 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYS 1718
Query: 371 PSSTSQ 354
P Q
Sbjct: 1719 PKQDEQ 1724
Score = 53.9 bits (128), Expect = 8e-06
Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = -3
Query: 494 PSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+SP + SSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1530 PTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPS-YSP 1579
[47][TOP]
>UniRef100_P04050 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Saccharomyces
cerevisiae RepID=RPB1_YEAST
Length = 1733
Score = 69.3 bits (168), Expect(2) = 2e-14
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ PGYSP S + Y+P+
Sbjct: 1663 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPA-YSPKQ 1721
Query: 338 NDK 330
+++
Sbjct: 1722 DEQ 1724
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1608 TSPSYSPTSPSYSPTSP 1624
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1572 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1628
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1593 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1649
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPS-YSP 1670
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1559 TSPSYSPTSPSYSPTSP 1575
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1566 TSPSYSPTSPSYSPTSP 1582
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1573 TSPSYSPTSPSYSPTSP 1589
Score = 66.2 bits (160), Expect(2) = 2e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1635 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1691
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1580 TSPSYSPTSPSYSPTSP 1596
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1642 PTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1698
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1587 TSPSYSPTSPSYSPTSP 1603
Score = 67.4 bits (163), Expect(2) = 2e-12
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1551 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1607
Score = 28.9 bits (63), Expect(2) = 2e-12
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP +S T P+YSPTSP
Sbjct: 1538 SSPGFSPTSPTYSPTSP 1554
Score = 67.0 bits (162), Expect(2) = 2e-11
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1544 PTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1600
Score = 58.9 bits (141), Expect(2) = 2e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1649 PTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPNYSPTSPS-YSP 1705
Score = 33.5 bits (75), Expect(2) = 2e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1594 TSPSYSPTSPSYSPTSP 1610
Score = 25.4 bits (54), Expect(2) = 2e-11
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP + + P +SPTSP
Sbjct: 1531 TSPGFGVSSPGFSPTSP 1547
Score = 55.8 bits (133), Expect(2) = 2e-10
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1621 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1680
Query: 359 SQYTP 345
S Y+P
Sbjct: 1681 S-YSP 1684
Score = 33.5 bits (75), Expect(2) = 2e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1601 TSPSYSPTSPSYSPTSP 1617
Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+SP+SPTYSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1593
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1568 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1627
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1628 PTSPS-YSP 1635
Score = 57.4 bits (137), Expect = 7e-07
Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+ SSP +SP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1586
Score = 57.0 bits (136), Expect = 9e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1554 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1613
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1614 PTSPS-YSP 1621
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1596 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1655
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1656 PTSPA-YSP 1663
Score = 56.6 bits (135), Expect = 1e-06
Identities = 32/66 (48%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP+YSP+SP +SP S GYSP P YS
Sbjct: 1659 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYS 1718
Query: 371 PSSTSQ 354
P Q
Sbjct: 1719 PKQDEQ 1724
Score = 54.3 bits (129), Expect = 6e-06
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+P+SP + SSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPS-YSP 1579
[48][TOP]
>UniRef100_Q5ACI7 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q5ACI7_CANAL
Length = 1728
Score = 69.3 bits (168), Expect(2) = 2e-14
Identities = 36/65 (55%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP S Y P+
Sbjct: 1664 PTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPGSPG-YEPEP 1722
Query: 338 NDKDE 324
KDE
Sbjct: 1723 PKKDE 1727
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1616 TSPSYSPTSPSYSPTSP 1632
Score = 68.9 bits (167), Expect(2) = 2e-14
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1643 PTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTS-PQYSP 1699
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1623 TSPSYSPTSPSYSPTSP 1639
Score = 67.8 bits (164), Expect(2) = 7e-14
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S S Y+P
Sbjct: 1629 PTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPS-YSP 1685
Score = 33.1 bits (74), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1609 TSPQYSPTSPSYSPTSP 1625
Score = 67.8 bits (164), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1594 PTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPS-YSP 1650
Score = 32.3 bits (72), Expect(2) = 1e-13
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSY+PTSP
Sbjct: 1546 TSPSYSPTSPSYAPTSP 1562
Score = 66.6 bits (161), Expect(2) = 3e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1622 PTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTS-PQYSP 1678
Score = 32.3 bits (72), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1595 TSPAYSPTSPSYSPTSP 1611
Score = 67.4 bits (163), Expect(2) = 3e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S S Y+P
Sbjct: 1580 PTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPS-YSP 1636
Score = 31.2 bits (69), Expect(2) = 3e-13
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+Y+ T P+YSPTSP
Sbjct: 1553 TSPSYAPTSPAYSPTSP 1569
Score = 65.5 bits (158), Expect(2) = 7e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPS-YSP 1671
Score = 32.0 bits (71), Expect(2) = 7e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P YSPTSP
Sbjct: 1602 TSPSYSPTSPQYSPTSP 1618
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+Y+P+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1573 PTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPS-YSP 1629
Score = 31.2 bits (69), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSY+PTSP
Sbjct: 1560 TSPAYSPTSPSYAPTSP 1576
Score = 65.1 bits (157), Expect(2) = 1e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+Y+P+SP S SP Y+P+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1559 PTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTS-PQYSP 1615
Score = 28.1 bits (61), Expect(2) = 1e-11
Identities = 14/19 (73%), Positives = 14/19 (73%), Gaps = 2/19 (10%)
Frame = -1
Query: 553 TSPNY--SXTFPSYSPTSP 503
TSP Y S T PSYSPTSP
Sbjct: 1537 TSPGYGYSPTSPSYSPTSP 1555
Score = 57.4 bits (137), Expect(2) = 3e-10
Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SP+ YSP+ P YSP+S S Y+P
Sbjct: 1601 PTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPA--YSPTSPSYSPTSPS-YSP 1657
Score = 31.2 bits (69), Expect(2) = 3e-10
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+Y+ T P+YSPTSP
Sbjct: 1567 TSPSYAPTSPAYSPTSP 1583
Score = 62.0 bits (149), Expect(2) = 2e-09
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+Y+P+SP S SP Y+P+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1545 PTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPA-YSP 1601
Score = 23.9 bits (50), Expect(2) = 2e-09
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ YSPTSP
Sbjct: 1532 TSPGYTSPGYGYSPTSP 1548
Score = 60.8 bits (146), Expect = 6e-08
Identities = 28/53 (52%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP + SP YSP+SP ++P S YSP+ P Y+P+S + Y+P
Sbjct: 1543 YSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPA-YSP 1594
Score = 56.2 bits (134), Expect = 2e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SP+ +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1625 PSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYS 1684
Query: 371 PSSTSQYTP 345
P+S QY+P
Sbjct: 1685 PTS-PQYSP 1692
[49][TOP]
>UniRef100_A7NVN7 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7NVN7_VITVI
Length = 1010
Score = 69.3 bits (168), Expect(2) = 2e-14
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S S Y+P
Sbjct: 908 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPS-YSP 964
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 853 TSPSYSPTSPSYSPTSP 869
Score = 68.2 bits (165), Expect(2) = 4e-14
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P +YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 880 PTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 936
Score = 33.5 bits (75), Expect(2) = 4e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 839 TSPSYSPTSPSYSPTSP 855
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 866 PTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPS-YSP 922
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 846 TSPSYSPTSPSYSPTSP 862
Score = 66.2 bits (160), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P Y+PSS ++Y+P
Sbjct: 929 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSS-AKYSP 985
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 909 TSPSYSPTSPSYSPTSP 925
Score = 67.8 bits (164), Expect(2) = 2e-13
Identities = 34/53 (64%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SPTYSPSSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 815 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 866
Score = 31.6 bits (70), Expect(2) = 2e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 797 TSPGYSPTSPGYSPTSP 813
Score = 67.4 bits (163), Expect(2) = 3e-13
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 817 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 873
Score = 31.6 bits (70), Expect(2) = 3e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 804 TSPGYSPTSPGYSPTSP 820
Score = 65.9 bits (159), Expect(2) = 4e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 859 PTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPS-YSP 915
Score = 64.7 bits (156), Expect(2) = 4e-13
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP Y+PSS ++SPS YSPS P SPS S Y+P
Sbjct: 955 YSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSLAYSPSSPRLSPS--SPYSP 1004
Score = 33.5 bits (75), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 916 TSPSYSPTSPSYSPTSP 932
Score = 32.3 bits (72), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 832 TSPAYSPTSPSYSPTSP 848
Score = 65.9 bits (159), Expect(2) = 2e-12
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 838 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPS-YSP 894
Score = 30.4 bits (67), Expect(2) = 2e-12
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSP+SP
Sbjct: 811 TSPGYSPTSPTYSPSSP 827
Score = 67.4 bits (163), Expect(2) = 6e-12
Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P+ YSP+SP YSP+SP S SP YSP+SP +SPS+ GYSP+ P YSP+S S Y+P
Sbjct: 789 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS-YSP 845
Score = 26.9 bits (58), Expect(2) = 6e-12
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS + P YSP+SP
Sbjct: 776 SSPGYSPSSPGYSPSSP 792
Score = 57.8 bits (138), Expect(2) = 5e-11
Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 8/67 (11%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SP S GYSP+ P YSP+S
Sbjct: 915 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSP 974
Query: 359 SQYTPQT 339
S Y P +
Sbjct: 975 S-YNPSS 980
Score = 33.5 bits (75), Expect(2) = 5e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 860 TSPSYSPTSPSYSPTSP 876
Score = 67.8 bits (164), Expect = 5e-10
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P + P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 880 PTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 939
Query: 359 SQYTP 345
S Y+P
Sbjct: 940 S-YSP 943
Score = 67.0 bits (162), Expect = 9e-10
Identities = 35/53 (66%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSPSSP YSPSSP S SP YSP+SP +SP S GYSP+ P YSPSS Y+P
Sbjct: 780 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSP 831
Score = 66.6 bits (161), Expect = 1e-09
Identities = 35/58 (60%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ YSPSSP YSP+SP S SP YSP+SP +SP S YSPS PGYSP+S + Y+P
Sbjct: 782 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 838
Score = 53.5 bits (127), Expect(2) = 9e-09
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 8/60 (13%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSSTSQYTP 345
YSP+SP YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S S Y+P
Sbjct: 801 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPS-YSP 859
Score = 30.0 bits (66), Expect(2) = 9e-09
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T P YSPTSP
Sbjct: 790 SSPGYSPTSPGYSPTSP 806
Score = 62.8 bits (151), Expect = 2e-08
Identities = 34/56 (60%), Positives = 42/56 (75%), Gaps = 2/56 (3%)
Frame = -3
Query: 500 YSP-SSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
+SP SSP YSPSSP S SP YSP+SP +SP S GYSP+ PGYSP+S + Y+P +
Sbjct: 772 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT-YSPSS 826
Score = 58.9 bits (141), Expect = 2e-07
Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S GYSP+ P YS
Sbjct: 904 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYS 963
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 964 PTSPS-YSP 971
Score = 44.7 bits (104), Expect(2) = 3e-07
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGY 375
P Y+PSS YSPS YSPSSP+ SPS+ YSP+ P Y
Sbjct: 971 PTSPSYNPSSAKYSPSLA--------YSPSSPRLSPSSPYSPTSPNY 1009
Score = 33.5 bits (75), Expect(2) = 3e-07
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 923 TSPSYSPTSPSYSPTSP 939
Score = 54.7 bits (130), Expect = 4e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 834 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYS 893
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 894 PTSPA-YSP 901
[50][TOP]
>UniRef100_UPI0000D5670C PREDICTED: similar to GA13798-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D5670C
Length = 2007
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1699
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1616 TSPNYSPTSPSYSPTSP 1632
Score = 68.2 bits (165), Expect(2) = 4e-14
Identities = 35/58 (60%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSPSSPQ+SP S +SPS P YSP+S S Y+P
Sbjct: 1734 PTSPSYSPSSPRYTPASPSYSPTSPSYSPSSPQYSPASPSFSPSSPKYSPTSPS-YSP 1790
Score = 33.5 bits (75), Expect(2) = 4e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1679 TSPSYSPTSPSYSPTSP 1695
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P +
Sbjct: 1685 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPSS 1743
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1630 TSPSYSPTSPSYSPTSP 1646
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1664 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1720
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1623 TSPSYSPTSPSYSPTSP 1639
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--------GYSPSQPGYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SPS+ YSP+ P YSPSS
Sbjct: 1706 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPASPSYSPTSPSYSPSS- 1764
Query: 359 SQYTP 345
QY+P
Sbjct: 1765 PQYSP 1769
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1651 TSPSYSPTSPSYSPTSP 1667
Score = 69.7 bits (169), Expect(2) = 1e-13
Identities = 31/60 (51%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P+ YSP+SP+YSP+SP +G SP YSP+SP +SP S YSPS P ++P+++S+Y+P +
Sbjct: 1776 PSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPNYSPSSPQHTPAASSRYSPSS 1835
Score = 30.0 bits (66), Expect(2) = 1e-13
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSP+SP
Sbjct: 1750 SPSYSPTSPSYSPSSP 1765
Score = 62.4 bits (150), Expect(2) = 2e-12
Identities = 35/77 (45%), Positives = 42/77 (54%), Gaps = 15/77 (19%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP---------------STGYSPSQP 381
P YSPSSP YSP+SP S SP YSP+SP +SP S YSP+ P
Sbjct: 1755 PTSPSYSPSSPQYSPASPSFSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSP 1814
Query: 380 GYSPSSTSQYTPQTNDK 330
YSPSS Q+TP + +
Sbjct: 1815 NYSPSS-PQHTPAASSR 1830
Score = 33.5 bits (75), Expect(2) = 2e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1700 TSPSYSPTSPSYSPTSP 1716
Score = 60.8 bits (146), Expect(2) = 2e-11
Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -3
Query: 506 SIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
S YSPSSP YSPSSP S SP YSP S ++SP S Y+P+ P YSP+S
Sbjct: 1829 SRYSPSSPNYSPSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSPAS 1877
Score = 31.6 bits (70), Expect(2) = 2e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T PSYSPTSP
Sbjct: 1777 SSPKYSPTSPSYSPTSP 1793
Score = 56.6 bits (135), Expect(2) = 1e-10
Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
P YSP+SP+YSP SP SP YSP+SP +SP S YSP+ P YSPSS +Y
Sbjct: 1692 PTSPSYSPTSPSYSPTSPSYSP----TSPSYSPTSPSYSPTSPSYSPTSPSYSPSS-PRY 1746
Query: 350 TP 345
TP
Sbjct: 1747 TP 1748
Score = 56.6 bits (135), Expect(2) = 1e-10
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPS---STSQYTP 345
YSP+SP+YSPSSP S SP +SPSSP++SP+ SPS SPS + QY+P
Sbjct: 1753 YSPTSPSYSPSSPQYSPASPSFSPSSPKYSPT---SPSYSPTSPSFAGGSPQYSP 1804
Score = 33.5 bits (75), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1637 TSPSYSPTSPSYSPTSP 1653
Score = 33.5 bits (75), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1707 TSPSYSPTSPSYSPTSP 1723
Score = 58.2 bits (139), Expect(2) = 2e-10
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P+ YSPSSP+YSP+SP S S YSP+SP ++P S YSP+ P YS S +Y+P +
Sbjct: 1833 PSSPNYSPSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSPASPAYS-SQPPRYSPSS 1891
Score = 30.8 bits (68), Expect(2) = 2e-10
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P+YSP+SP
Sbjct: 1805 TSPSYSPTSPNYSPSSP 1821
Score = 60.5 bits (145), Expect(2) = 6e-10
Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P +P SP YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1594 PTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1650
Score = 55.1 bits (131), Expect(2) = 6e-10
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYS-PSQPGYSPSSTSQYTPQT 339
P Y+P+SP+YSP+SP S P YSPSSP +SP++ + P P YS SS S YT +
Sbjct: 1861 PTSPTYTPTSPSYSPASPAYSSQPPRYSPSSPSYSPTSPITLPPSPYYSRSS-STYTFSS 1919
Query: 338 ND 333
D
Sbjct: 1920 RD 1921
Score = 32.3 bits (72), Expect(2) = 6e-10
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SPNYS + PSYSPTSP
Sbjct: 1834 SSPNYSPSSPSYSPTSP 1850
Score = 26.9 bits (58), Expect(2) = 6e-10
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS + PS+ PTSP
Sbjct: 1582 SPSYSPSSPSFQPTSP 1597
Score = 67.4 bits (163), Expect = 7e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1611 PGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1670
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1671 PTSPS-YSP 1678
Score = 65.5 bits (158), Expect = 3e-09
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P ++ V P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1597 PSMTPVSPG---YSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1653
Query: 359 SQYTP 345
S Y+P
Sbjct: 1654 S-YSP 1657
Score = 57.8 bits (138), Expect(2) = 5e-09
Identities = 31/58 (53%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ YSP+SP YSP S S SP Y+P+SP +SP S YS P YSPSS S Y+P
Sbjct: 1840 PSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSPASPAYSSQPPRYSPSSPS-YSP 1896
Score = 26.6 bits (57), Expect(2) = 5e-09
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+++ P YSPTSP
Sbjct: 1791 TSPSFAGGSPQYSPTSP 1807
Score = 63.5 bits (153), Expect = 1e-08
Identities = 31/53 (58%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSPSSP++ P+SP + VSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1585 YSPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPS-YSP 1636
Score = 62.8 bits (151), Expect = 2e-08
Identities = 39/73 (53%), Positives = 45/73 (61%), Gaps = 9/73 (12%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPT--------YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQ 384
P S PN YSPSSP YSPSSP S SP YSP+SPQ+SP ST YSP+
Sbjct: 1807 PSYSPTSPN---YSPSSPQHTPAASSRYSPSSPNYSPSSPSYSPTSPQYSPHSTKYSPTS 1863
Query: 383 PGYSPSSTSQYTP 345
P Y+P+S S Y+P
Sbjct: 1864 PTYTPTSPS-YSP 1875
Score = 58.2 bits (139), Expect = 4e-07
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ + P+SP+ +P SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1587 PSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1643
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1639 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1698
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1699 PTSPS-YSP 1706
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1667 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1726
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1727 PTSPS-YSP 1734
Score = 56.6 bits (135), Expect = 1e-06
Identities = 38/85 (44%), Positives = 44/85 (51%), Gaps = 19/85 (22%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP-----------TYSPSSPYNSGVSPDYSPSSPQFSP--STGY 396
P S P S SPS YSP+SP S SP+YSPSSPQ +P S+ Y
Sbjct: 1772 PSFSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPNYSPSSPQHTPAASSRY 1831
Query: 395 SPSQPGYSPSSTS------QYTPQT 339
SPS P YSPSS S QY+P +
Sbjct: 1832 SPSSPNYSPSSPSYSPTSPQYSPHS 1856
Score = 56.2 bits (134), Expect = 2e-06
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYS 372
P S P+ S SPS +YSPSSP + SP YSP+SP +SPS+ YSP+ P +S
Sbjct: 1716 PSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPASPSYSPTSPSYSPSSPQYSPASPSFS 1775
Query: 371 PSSTSQYTP 345
PSS +Y+P
Sbjct: 1776 PSS-PKYSP 1783
Score = 55.1 bits (131), Expect = 3e-06
Identities = 33/73 (45%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Frame = -3
Query: 533 DISIVFPNISIYSPS--SPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQ 384
D S + P +SP+ SP SP G SP YSPSSP F P S GYSP+
Sbjct: 1551 DASGMSPGYGAWSPTPQSPAMSPFMASPHGQSPSYSPSSPSFQPTSPSMTPVSPGYSPTS 1610
Query: 383 PGYSPSSTSQYTP 345
PGYSP+S + Y+P
Sbjct: 1611 PGYSPTSPN-YSP 1622
[51][TOP]
>UniRef100_UPI0001951285 220 kDa DNA-directed RNA polymerase polypeptide A n=1 Tax=Canis lupus
familiaris RepID=UPI0001951285
Length = 1969
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1632 TSPNYSPTSPSYSPTSP 1648
Score = 68.2 bits (165), Expect(2) = 4e-14
Identities = 32/59 (54%), Positives = 42/59 (71%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP + +SP+YSP+SP S YSP+ P YSPSS +YTPQ+
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPNSPTSPSYSPTSPSYSPSS-PRYTPQS 1814
Score = 33.5 bits (75), Expect(2) = 4e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1702 TSPSYSPTSPSYSPTSP 1718
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1743
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1639 TSPSYSPTSPSYSPTSP 1655
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1646 TSPSYSPTSPSYSPTSP 1662
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPS + YTP
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPN-YTP 1757
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1653 TSPSYSPTSPSYSPTSP 1669
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1694 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1750
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1715 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1771
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1660 TSPSYSPTSPSYSPTSP 1676
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1667 TSPSYSPTSPSYSPTSP 1683
Score = 65.1 bits (157), Expect(2) = 3e-13
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 7/64 (10%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTS------ 357
P YSP+SP+YSPSSP + SP Y+PSSP +SPS+ YSP+ P Y+P+S S
Sbjct: 1791 PTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSP 1850
Query: 356 QYTP 345
+YTP
Sbjct: 1851 EYTP 1854
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1758 TSPSYSPTSPSYSPTSP 1774
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1882 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1941
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1855 TSPKYSPTSPKYSPTSP 1871
Score = 63.9 bits (154), Expect(2) = 4e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P Y+PSSP+YSPSSP S SP Y+P+SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1812 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS-PKYSP 1868
Score = 61.2 bits (147), Expect(2) = 4e-12
Identities = 29/57 (50%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYT 348
P YSP+SP YSPS P + SP YSP+SP +SP S Y+P P YSP+S + T
Sbjct: 1736 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPNSPT 1792
Score = 33.5 bits (75), Expect(2) = 4e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1681 TSPSYSPTSPSYSPTSP 1697
Score = 30.8 bits (68), Expect(2) = 4e-12
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ P+YSPTSP
Sbjct: 1772 TSPNYTPMSPNYSPTSP 1788
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1590 SPSYSPTSPAYEPRSP 1605
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1833 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1889
Score = 30.4 bits (67), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS + PSYSPTSP
Sbjct: 1820 SSPSYSPSSPSYSPTSP 1836
Score = 63.2 bits (152), Expect(2) = 2e-11
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1840 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1896
Score = 62.0 bits (149), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1868 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1924
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 1834 TSPKYTPTSPSYSPSSP 1850
Score = 29.3 bits (64), Expect(2) = 2e-11
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P Y+PTSP
Sbjct: 1827 SSPSYSPTSPKYTPTSP 1843
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1680
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1612 SPSYSPTSPSYSPTSP 1627
Score = 59.7 bits (143), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1861 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1917
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + P Y+PTSP
Sbjct: 1841 TSPSYSPSSPEYTPTSP 1857
Score = 54.3 bits (129), Expect(2) = 5e-10
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
P YSP+SP+YSP SP SP+YSPS P ++P S YSP+ P YSP+S + Y
Sbjct: 1722 PTSPSYSPTSPSYSPTSPSYSP----TSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPN-Y 1776
Query: 350 TPQT 339
TP +
Sbjct: 1777 TPMS 1780
Score = 33.5 bits (75), Expect(2) = 5e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1674 TSPSYSPTSPSYSPTSP 1690
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1627 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1686
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1687 PTSPS-YSP 1694
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 63.2 bits (152), Expect = 1e-08
Identities = 37/72 (51%), Positives = 44/72 (61%), Gaps = 8/72 (11%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--------GYSPSQP 381
P S PN Y+P SP YSP+SP NS SP YSP+SP +SPS+ Y+PS P
Sbjct: 1767 PSYSPTSPN---YTPMSPNYSPTSP-NSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSP 1822
Query: 380 GYSPSSTSQYTP 345
YSPSS S Y+P
Sbjct: 1823 SYSPSSPS-YSP 1833
Score = 63.2 bits (152), Expect = 1e-08
Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPT---YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSP 369
P+ + + PN S SP+SPT YSP+SP S SP Y+P SP ++PS+ YSPS P YSP
Sbjct: 1774 PNYTPMSPNYSPTSPNSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSP 1833
Query: 368 SSTSQYTP 345
+S +YTP
Sbjct: 1834 TS-PKYTP 1840
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1617 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1673
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1608 YTPQSPSYSPTSP 1620
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1896 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1950
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1910 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1967
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1862 TSPKYSPTSPKYSPTSP 1878
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS+P Y+
Sbjct: 1697 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYT 1756
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1757 PTSPS-YSP 1764
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1714
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1715 PTSPS-YSP 1722
[52][TOP]
>UniRef100_B7PJA3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis
RepID=B7PJA3_IXOSC
Length = 1937
Score = 68.9 bits (167), Expect(2) = 2e-14
Identities = 36/66 (54%), Positives = 43/66 (65%), Gaps = 7/66 (10%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTS------ 357
P YSP+SP+YSPSSP S SP YSP SP +SPS+ YSP+ P YSP+S S
Sbjct: 1749 PTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSP 1808
Query: 356 QYTPQT 339
QYTP +
Sbjct: 1809 QYTPSS 1814
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1658 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1714
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1631 TSPNYSPTSPSYSPTSP 1647
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1694 TSPSYSPTSPSYSPTSP 1710
Score = 67.8 bits (164), Expect(2) = 5e-14
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSPSSP +SP S YSP P YSPSS +Y+P
Sbjct: 1735 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPSS-PKYSP 1791
Score = 33.5 bits (75), Expect(2) = 5e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1680 TSPSYSPTSPSYSPTSP 1696
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSPSSP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P +
Sbjct: 1707 PTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPSS 1765
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
P YSPSSP YSP+SP S SP YSP SPQ++PS+ YSP+ P YSP+S S Y+P +
Sbjct: 1777 PGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTSPS-YSPSS 1835
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1652 TSPSYSPTSPSYSPTSP 1668
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1736 TSPSYSPTSPSYSPTSP 1752
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSPS P Y+P+S S Y+P
Sbjct: 1679 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPS-YSP 1735
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1638 TSPSYSPTSPSYSPTSP 1654
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS+ Y+P+ P YSP+S S Y+P
Sbjct: 1686 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPS-YSP 1742
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 32/55 (58%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
YSP+SP+YSP+SP S SP YSP+SP +SPS+ YSP P YSP S S Y+P +
Sbjct: 1733 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPS-YSPSS 1786
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1645 TSPSYSPTSPSYSPTSP 1661
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1687 TSPSYSPTSPSYSPTSP 1703
Score = 67.4 bits (163), Expect(2) = 3e-13
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTY+PSSP S SP YSP+SPQ+SP S YSP+ P YSP+S + Y+P
Sbjct: 1840 PTSPKYSPTSPTYTPSSPKYSPTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPT-YSP 1896
Score = 31.6 bits (70), Expect(2) = 3e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T PSYSPTSP
Sbjct: 1785 SSPKYSPTSPSYSPTSP 1801
Score = 66.6 bits (161), Expect(2) = 7e-13
Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ YSP+SPTYSP+SP S SP YSP+SP++SP S Y+PS P YSP+S QY+P
Sbjct: 1812 PSSPKYSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPTS-PQYSP 1868
Score = 65.9 bits (159), Expect(2) = 7e-13
Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS----TGYSPSQPGYSPSSTSQYT 348
P YSP+SP YSP+SP S SP YSP+SP +SP+ + YSP+ PGYSPSS + Y+
Sbjct: 1875 PTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSPTSPGYSPSSPT-YS 1933
Query: 347 P 345
P
Sbjct: 1934 P 1934
Score = 31.6 bits (70), Expect(2) = 7e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSP+SP
Sbjct: 1820 TSPTYSPTSPSYSPSSP 1836
Score = 30.8 bits (68), Expect(2) = 7e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSP SP
Sbjct: 1792 TSPSYSPTSPSYSPGSP 1808
Score = 64.7 bits (156), Expect(2) = 1e-12
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+PSSP YSP+SP S SP YSPSSP++SP S YSP+ P Y+PSS +Y+P
Sbjct: 1805 PGSPQYTPSSPKYSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSS-PKYSP 1861
Score = 32.0 bits (71), Expect(2) = 1e-12
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSP+SP
Sbjct: 1750 TSPSYSPTSPSYSPSSP 1766
Score = 63.2 bits (152), Expect(2) = 4e-12
Identities = 33/55 (60%), Positives = 39/55 (70%), Gaps = 4/55 (7%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQ---FSP-STGYSPSQPGYSPSS 363
P YSP+SPTYSP+SP S SP YSP+SP+ +SP S GYSPS P YSP+S
Sbjct: 1882 PTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSPTSPGYSPSSPTYSPTS 1936
Score = 61.2 bits (147), Expect(2) = 4e-12
Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP SPS YSP+ P YSPSS + Y+P
Sbjct: 1714 PTSPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPSSPN-YSP 1770
Query: 344 QT 339
Q+
Sbjct: 1771 QS 1772
Score = 33.5 bits (75), Expect(2) = 4e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1659 TSPSYSPTSPSYSPTSP 1675
Score = 31.6 bits (70), Expect(2) = 4e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1862 TSPQYSPTSPQYSPTSP 1878
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ YSP+SP YSP+SP + SP YSP+SPQ+SP S YSP+ P YSP+S +Y+P
Sbjct: 1833 PSSPKYSPTSPKYSPTSPTYTPSSPKYSPTSPQYSPTSPQYSPTSPKYSPTS-PKYSP 1889
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1861 PTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSP 1920
Score = 30.4 bits (67), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T P+YSPTSP
Sbjct: 1813 SSPKYSPTSPTYSPTSP 1829
Score = 30.4 bits (67), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + P YSPTSP
Sbjct: 1827 TSPSYSPSSPKYSPTSP 1843
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1626 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1685
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1686 PTSPS-YSP 1693
Score = 67.4 bits (163), Expect = 7e-10
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P + P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1602 PSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP 1661
Query: 359 SQYTP 345
S Y+P
Sbjct: 1662 S-YSP 1665
Score = 66.2 bits (160), Expect = 1e-09
Identities = 36/62 (58%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = -3
Query: 527 SIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
S V PN YSPSSP Y+PSSP + SP YSP+SP +SP S YSP+ P YSP+S S Y
Sbjct: 1587 SPVSPN---YSPSSPAYAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPS-Y 1642
Query: 350 TP 345
+P
Sbjct: 1643 SP 1644
Score = 63.2 bits (152), Expect = 1e-08
Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPS----SPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S SPS SP+YSPSSP S SP YSP+SP +SP S Y+PS P YS
Sbjct: 1759 PSYSPSSPNYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYS 1818
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1819 PTSPT-YSP 1826
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1654 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1713
Query: 371 PSSTSQYTPQT 339
P+S S Y+P +
Sbjct: 1714 PTSPS-YSPSS 1723
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSPSSP ++P S YSP+ P YS
Sbjct: 1682 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYS 1741
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1742 PTSPS-YSP 1749
Score = 57.4 bits (137), Expect = 7e-07
Identities = 35/69 (50%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP+YSP SP +SP S YSPS P YS
Sbjct: 1731 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPSSPKYS 1790
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1791 PTSPS-YSP 1798
Score = 55.8 bits (133), Expect = 2e-06
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Frame = -3
Query: 503 IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
I SP SP YSPSSP + SP +P+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1585 IPSPVSPNYSPSSPAYAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPN-YSP 1637
[53][TOP]
>UniRef100_UPI00005A0B24 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 15 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B24
Length = 1924
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1660 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1716
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1633 TSPNYSPTSPSYSPTSP 1649
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1681 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1737
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1688 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1744
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1640 TSPSYSPTSPSYSPTSP 1656
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1647 TSPSYSPTSPSYSPTSP 1663
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPS + YTP
Sbjct: 1702 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPN-YTP 1758
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1654 TSPSYSPTSPSYSPTSP 1670
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1695 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1751
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1716 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1772
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1661 TSPSYSPTSPSYSPTSP 1677
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1668 TSPSYSPTSPSYSPTSP 1684
Score = 65.1 bits (157), Expect(2) = 3e-13
Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS-QYTP 345
P YSP+SP YSPS P + SP YSP+SP +SP S Y+P P YSP+ TS +YTP
Sbjct: 1737 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTP 1795
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1682 TSPSYSPTSPSYSPTSP 1698
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1788 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1844
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1795 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1851
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1731 TSPSYSPTSPSYSPTSP 1747
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1759 TSPSYSPTSPSYSPTSP 1775
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1837 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1896
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1810 TSPKYSPTSPKYSPTSP 1826
Score = 60.8 bits (146), Expect(2) = 6e-12
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S P+Y+P+SP +SP S YSP+ P Y+P S + T
Sbjct: 1730 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPT 1789
Query: 338 NDK 330
+ K
Sbjct: 1790 SPK 1792
Score = 33.5 bits (75), Expect(2) = 6e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1675 TSPSYSPTSPSYSPTSP 1691
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1611 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1667
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1591 SPSYSPTSPAYEPRSP 1606
Score = 62.0 bits (149), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1823 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1879
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 1789 TSPKYTPTSPSYSPSSP 1805
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1625 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1681
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1613 SPSYSPTSPSYSPTSP 1628
Score = 59.7 bits (143), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1816 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1872
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + P Y+PTSP
Sbjct: 1796 TSPSYSPSSPEYTPTSP 1812
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1628 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1687
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1688 PTSPS-YSP 1695
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1609 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1660
Score = 63.9 bits (154), Expect = 7e-09
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 7/71 (9%)
Frame = -3
Query: 536 PDISIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP---STGYSPSQPG 378
P S PN S Y+P+SP+YSP+SP S SP+Y+P SP +SP S Y+P+ P
Sbjct: 1740 PSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPS 1799
Query: 377 YSPSSTSQYTP 345
YSPSS +YTP
Sbjct: 1800 YSPSS-PEYTP 1809
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1618 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1674
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1609 YTPQSPSYSPTSP 1621
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1851 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1905
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1865 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1922
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1817 TSPKYSPTSPKYSPTSP 1833
Score = 60.5 bits (145), Expect = 8e-08
Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + + PN S +P+SP Y+P+SP S SP+Y+P+SP++SP S YSP+ P YSP+S
Sbjct: 1775 PNYTPMSPNYSP-TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1833
Query: 359 SQYTPQT 339
+ Y+P T
Sbjct: 1834 T-YSPTT 1839
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS+P Y+
Sbjct: 1698 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYT 1757
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1758 PTSPS-YSP 1765
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1656 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1715
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1716 PTSPS-YSP 1723
[54][TOP]
>UniRef100_UPI00005A0B20 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 11 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B20
Length = 1923
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1632 TSPNYSPTSPSYSPTSP 1648
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1743
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1639 TSPSYSPTSPSYSPTSP 1655
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1646 TSPSYSPTSPSYSPTSP 1662
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPS + YTP
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPN-YTP 1757
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1653 TSPSYSPTSPSYSPTSP 1669
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1694 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1750
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1715 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1771
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1660 TSPSYSPTSPSYSPTSP 1676
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1667 TSPSYSPTSPSYSPTSP 1683
Score = 65.1 bits (157), Expect(2) = 3e-13
Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS-QYTP 345
P YSP+SP YSPS P + SP YSP+SP +SP S Y+P P YSP+ TS +YTP
Sbjct: 1736 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTP 1794
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1681 TSPSYSPTSPSYSPTSP 1697
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1787 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1843
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1794 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1850
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1730 TSPSYSPTSPSYSPTSP 1746
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1758 TSPSYSPTSPSYSPTSP 1774
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1836 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1895
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1809 TSPKYSPTSPKYSPTSP 1825
Score = 60.8 bits (146), Expect(2) = 6e-12
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S P+Y+P+SP +SP S YSP+ P Y+P S + T
Sbjct: 1729 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPT 1788
Query: 338 NDK 330
+ K
Sbjct: 1789 SPK 1791
Score = 33.5 bits (75), Expect(2) = 6e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1674 TSPSYSPTSPSYSPTSP 1690
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1590 SPSYSPTSPAYEPRSP 1605
Score = 62.0 bits (149), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1822 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1878
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 1788 TSPKYTPTSPSYSPSSP 1804
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1680
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1612 SPSYSPTSPSYSPTSP 1627
Score = 59.7 bits (143), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1815 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1871
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + P Y+PTSP
Sbjct: 1795 TSPSYSPSSPEYTPTSP 1811
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1627 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1686
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1687 PTSPS-YSP 1694
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 63.9 bits (154), Expect = 7e-09
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 7/71 (9%)
Frame = -3
Query: 536 PDISIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP---STGYSPSQPG 378
P S PN S Y+P+SP+YSP+SP S SP+Y+P SP +SP S Y+P+ P
Sbjct: 1739 PSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPS 1798
Query: 377 YSPSSTSQYTP 345
YSPSS +YTP
Sbjct: 1799 YSPSS-PEYTP 1808
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1617 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1673
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1608 YTPQSPSYSPTSP 1620
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1850 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1904
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1864 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1921
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1816 TSPKYSPTSPKYSPTSP 1832
Score = 60.5 bits (145), Expect = 8e-08
Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + + PN S +P+SP Y+P+SP S SP+Y+P+SP++SP S YSP+ P YSP+S
Sbjct: 1774 PNYTPMSPNYSP-TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1832
Query: 359 SQYTPQT 339
+ Y+P T
Sbjct: 1833 T-YSPTT 1838
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS+P Y+
Sbjct: 1697 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYT 1756
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1757 PTSPS-YSP 1764
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1714
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1715 PTSPS-YSP 1722
[55][TOP]
>UniRef100_UPI00005A0B21 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 12 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B21
Length = 1922
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1658 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1714
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1631 TSPNYSPTSPSYSPTSP 1647
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1679 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1735
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1686 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1742
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1638 TSPSYSPTSPSYSPTSP 1654
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1645 TSPSYSPTSPSYSPTSP 1661
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPS + YTP
Sbjct: 1700 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPN-YTP 1756
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1652 TSPSYSPTSPSYSPTSP 1668
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1693 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1749
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1714 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1770
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1659 TSPSYSPTSPSYSPTSP 1675
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1666 TSPSYSPTSPSYSPTSP 1682
Score = 65.1 bits (157), Expect(2) = 3e-13
Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS-QYTP 345
P YSP+SP YSPS P + SP YSP+SP +SP S Y+P P YSP+ TS +YTP
Sbjct: 1735 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTP 1793
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1680 TSPSYSPTSPSYSPTSP 1696
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1786 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1842
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1793 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1849
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1729 TSPSYSPTSPSYSPTSP 1745
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1757 TSPSYSPTSPSYSPTSP 1773
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1835 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1894
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1808 TSPKYSPTSPKYSPTSP 1824
Score = 60.8 bits (146), Expect(2) = 6e-12
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S P+Y+P+SP +SP S YSP+ P Y+P S + T
Sbjct: 1728 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPT 1787
Query: 338 NDK 330
+ K
Sbjct: 1788 SPK 1790
Score = 33.5 bits (75), Expect(2) = 6e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1673 TSPSYSPTSPSYSPTSP 1689
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1609 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1665
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1589 SPSYSPTSPAYEPRSP 1604
Score = 62.0 bits (149), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1821 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1877
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 1787 TSPKYTPTSPSYSPSSP 1803
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1623 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1679
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1611 SPSYSPTSPSYSPTSP 1626
Score = 59.7 bits (143), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1814 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1870
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + P Y+PTSP
Sbjct: 1794 TSPSYSPSSPEYTPTSP 1810
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1626 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1685
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1686 PTSPS-YSP 1693
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1658
Score = 63.9 bits (154), Expect = 7e-09
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 7/71 (9%)
Frame = -3
Query: 536 PDISIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP---STGYSPSQPG 378
P S PN S Y+P+SP+YSP+SP S SP+Y+P SP +SP S Y+P+ P
Sbjct: 1738 PSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPS 1797
Query: 377 YSPSSTSQYTP 345
YSPSS +YTP
Sbjct: 1798 YSPSS-PEYTP 1807
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1616 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1672
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1607 YTPQSPSYSPTSP 1619
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1849 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1903
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1863 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1920
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1815 TSPKYSPTSPKYSPTSP 1831
Score = 60.5 bits (145), Expect = 8e-08
Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + + PN S +P+SP Y+P+SP S SP+Y+P+SP++SP S YSP+ P YSP+S
Sbjct: 1773 PNYTPMSPNYSP-TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1831
Query: 359 SQYTPQT 339
+ Y+P T
Sbjct: 1832 T-YSPTT 1837
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS+P Y+
Sbjct: 1696 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYT 1755
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1756 PTSPS-YSP 1763
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1654 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1713
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1714 PTSPS-YSP 1721
[56][TOP]
>UniRef100_UPI00005A0B16 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B16
Length = 1922
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1658 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1714
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1631 TSPNYSPTSPSYSPTSP 1647
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1679 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1735
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1686 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1742
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1638 TSPSYSPTSPSYSPTSP 1654
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1645 TSPSYSPTSPSYSPTSP 1661
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPS + YTP
Sbjct: 1700 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPN-YTP 1756
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1652 TSPSYSPTSPSYSPTSP 1668
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1693 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1749
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1714 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1770
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1659 TSPSYSPTSPSYSPTSP 1675
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1666 TSPSYSPTSPSYSPTSP 1682
Score = 65.1 bits (157), Expect(2) = 3e-13
Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS-QYTP 345
P YSP+SP YSPS P + SP YSP+SP +SP S Y+P P YSP+ TS +YTP
Sbjct: 1735 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTP 1793
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1680 TSPSYSPTSPSYSPTSP 1696
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1786 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1842
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1793 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1849
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1729 TSPSYSPTSPSYSPTSP 1745
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1757 TSPSYSPTSPSYSPTSP 1773
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1835 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1894
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1808 TSPKYSPTSPKYSPTSP 1824
Score = 60.8 bits (146), Expect(2) = 6e-12
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S P+Y+P+SP +SP S YSP+ P Y+P S + T
Sbjct: 1728 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPT 1787
Query: 338 NDK 330
+ K
Sbjct: 1788 SPK 1790
Score = 33.5 bits (75), Expect(2) = 6e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1673 TSPSYSPTSPSYSPTSP 1689
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1609 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1665
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1589 SPSYSPTSPAYEPRSP 1604
Score = 62.0 bits (149), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1821 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1877
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 1787 TSPKYTPTSPSYSPSSP 1803
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1623 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1679
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1611 SPSYSPTSPSYSPTSP 1626
Score = 59.7 bits (143), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1814 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1870
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + P Y+PTSP
Sbjct: 1794 TSPSYSPSSPEYTPTSP 1810
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1626 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1685
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1686 PTSPS-YSP 1693
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1658
Score = 63.9 bits (154), Expect = 7e-09
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 7/71 (9%)
Frame = -3
Query: 536 PDISIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP---STGYSPSQPG 378
P S PN S Y+P+SP+YSP+SP S SP+Y+P SP +SP S Y+P+ P
Sbjct: 1738 PSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPS 1797
Query: 377 YSPSSTSQYTP 345
YSPSS +YTP
Sbjct: 1798 YSPSS-PEYTP 1807
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1616 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1672
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1607 YTPQSPSYSPTSP 1619
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1849 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1903
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1863 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1920
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1815 TSPKYSPTSPKYSPTSP 1831
Score = 60.5 bits (145), Expect = 8e-08
Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + + PN S +P+SP Y+P+SP S SP+Y+P+SP++SP S YSP+ P YSP+S
Sbjct: 1773 PNYTPMSPNYSP-TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1831
Query: 359 SQYTPQT 339
+ Y+P T
Sbjct: 1832 T-YSPTT 1837
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS+P Y+
Sbjct: 1696 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYT 1755
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1756 PTSPS-YSP 1763
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1654 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1713
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1714 PTSPS-YSP 1721
[57][TOP]
>UniRef100_UPI0000E24648 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Pan troglodytes RepID=UPI0000E24648
Length = 1913
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1632 TSPNYSPTSPSYSPTSP 1648
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 14/73 (19%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------------STGYSPSQPG 378
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSQSYHPTVVDSSTSPSYSPTSPS 1746
Query: 377 YSPSSTSQYTPQT 339
YSPSS +YTPQ+
Sbjct: 1747 YSPSS-PRYTPQS 1758
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1639 TSPSYSPTSPSYSPTSP 1655
Score = 65.1 bits (157), Expect(2) = 3e-13
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P SP + SP YSPSSP +SP S Y+P+ P YSPSS +YTP
Sbjct: 1742 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSS-PEYTP 1798
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1688 TSPSYSPTSPSYSPTSP 1704
Score = 63.9 bits (154), Expect(2) = 7e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P Y+PSSP+YSPSSP S SP Y+P+SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1756 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS-PKYSP 1812
Score = 33.5 bits (75), Expect(2) = 7e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1702 TSPSYSPTSPSYSPTSP 1718
Score = 63.5 bits (153), Expect(2) = 9e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ Y+P SPTY+PSSP S SP YSP+SP+++P S YSPS P Y+P+S +Y+P
Sbjct: 1749 PSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS-PKYSP 1805
Score = 33.5 bits (75), Expect(2) = 9e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1695 TSPSYSPTSPSYSPTSP 1711
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1826 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1885
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1799 TSPKYSPTSPKYSPTSP 1815
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1590 SPSYSPTSPAYEPRSP 1605
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1777 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1833
Score = 30.4 bits (67), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS + PSYSPTSP
Sbjct: 1764 SSPSYSPSSPSYSPTSP 1780
Score = 63.2 bits (152), Expect(2) = 2e-11
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1784 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1840
Score = 62.0 bits (149), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1812 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1868
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 1778 TSPKYTPTSPSYSPSSP 1794
Score = 29.3 bits (64), Expect(2) = 2e-11
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P Y+PTSP
Sbjct: 1771 SSPSYSPTSPKYTPTSP 1787
Score = 58.5 bits (140), Expect(2) = 3e-11
Identities = 34/78 (43%), Positives = 43/78 (55%), Gaps = 21/78 (26%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSP-------------YNSGVSPDYSPSSPQFSPST--------G 399
P YSP+SP+YSP+SP +S SP YSP+SP +SPS+
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSQSYHPTVVDSSTSPSYSPTSPSYSPSSPRYTPQSPT 1760
Query: 398 YSPSQPGYSPSSTSQYTP 345
Y+PS P YSPSS S Y+P
Sbjct: 1761 YTPSSPSYSPSSPS-YSP 1777
Score = 33.5 bits (75), Expect(2) = 3e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1646 TSPSYSPTSPSYSPTSP 1662
Score = 58.2 bits (139), Expect(2) = 4e-11
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
S +SP+YSP+SP S SP Y+P SP ++PS+ YSPS P YSP+S +YTP
Sbjct: 1734 SSTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTS-PKYTP 1784
Score = 33.5 bits (75), Expect(2) = 4e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1681 TSPSYSPTSPSYSPTSP 1697
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1680
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1612 SPSYSPTSPSYSPTSP 1627
Score = 59.7 bits (143), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1805 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1861
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + P Y+PTSP
Sbjct: 1785 TSPSYSPSSPEYTPTSP 1801
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1627 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1686
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1687 PTSPS-YSP 1694
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1617 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1673
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1608 YTPQSPSYSPTSP 1620
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1840 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1894
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1854 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1911
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1806 TSPKYSPTSPKYSPTSP 1822
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1714
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1715 PTSPS-YSP 1722
[58][TOP]
>UniRef100_UPI00005A0B28 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 19 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B28
Length = 1908
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1644 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1700
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1617 TSPNYSPTSPSYSPTSP 1633
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1665 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1721
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1672 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1728
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1624 TSPSYSPTSPSYSPTSP 1640
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1631 TSPSYSPTSPSYSPTSP 1647
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPS + YTP
Sbjct: 1686 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPN-YTP 1742
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1638 TSPSYSPTSPSYSPTSP 1654
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1679 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1735
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1700 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1756
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1645 TSPSYSPTSPSYSPTSP 1661
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1652 TSPSYSPTSPSYSPTSP 1668
Score = 65.1 bits (157), Expect(2) = 3e-13
Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS-QYTP 345
P YSP+SP YSPS P + SP YSP+SP +SP S Y+P P YSP+ TS +YTP
Sbjct: 1721 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTP 1779
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1666 TSPSYSPTSPSYSPTSP 1682
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1772 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1828
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1779 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1835
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1715 TSPSYSPTSPSYSPTSP 1731
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1743 TSPSYSPTSPSYSPTSP 1759
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1821 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1880
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1794 TSPKYSPTSPKYSPTSP 1810
Score = 60.8 bits (146), Expect(2) = 6e-12
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S P+Y+P+SP +SP S YSP+ P Y+P S + T
Sbjct: 1714 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPT 1773
Query: 338 NDK 330
+ K
Sbjct: 1774 SPK 1776
Score = 33.5 bits (75), Expect(2) = 6e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1659 TSPSYSPTSPSYSPTSP 1675
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1595 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1651
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1575 SPSYSPTSPAYEPRSP 1590
Score = 62.0 bits (149), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1807 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1863
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 1773 TSPKYTPTSPSYSPSSP 1789
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1609 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1665
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1597 SPSYSPTSPSYSPTSP 1612
Score = 59.7 bits (143), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1800 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1856
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + P Y+PTSP
Sbjct: 1780 TSPSYSPSSPEYTPTSP 1796
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1612 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1671
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1672 PTSPS-YSP 1679
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1593 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1644
Score = 63.9 bits (154), Expect = 7e-09
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 7/71 (9%)
Frame = -3
Query: 536 PDISIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP---STGYSPSQPG 378
P S PN S Y+P+SP+YSP+SP S SP+Y+P SP +SP S Y+P+ P
Sbjct: 1724 PSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPS 1783
Query: 377 YSPSSTSQYTP 345
YSPSS +YTP
Sbjct: 1784 YSPSS-PEYTP 1793
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1602 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1658
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1593 YTPQSPSYSPTSP 1605
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1835 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1889
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1849 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1906
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1801 TSPKYSPTSPKYSPTSP 1817
Score = 60.5 bits (145), Expect = 8e-08
Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + + PN S +P+SP Y+P+SP S SP+Y+P+SP++SP S YSP+ P YSP+S
Sbjct: 1759 PNYTPMSPNYSP-TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1817
Query: 359 SQYTPQT 339
+ Y+P T
Sbjct: 1818 T-YSPTT 1823
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS+P Y+
Sbjct: 1682 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYT 1741
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1742 PTSPS-YSP 1749
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1640 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1699
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1700 PTSPS-YSP 1707
[59][TOP]
>UniRef100_UPI00005A0B2A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 21 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2A
Length = 1896
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1648 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1704
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1621 TSPNYSPTSPSYSPTSP 1637
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1669 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1725
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1676 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1732
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1628 TSPSYSPTSPSYSPTSP 1644
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1635 TSPSYSPTSPSYSPTSP 1651
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPS + YTP
Sbjct: 1690 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPN-YTP 1746
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1642 TSPSYSPTSPSYSPTSP 1658
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1683 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1739
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1704 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1760
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1649 TSPSYSPTSPSYSPTSP 1665
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1656 TSPSYSPTSPSYSPTSP 1672
Score = 64.7 bits (156), Expect(2) = 4e-13
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSPS P + SP YSP+SP +SP S Y+P+ P YSPSS +YTP
Sbjct: 1725 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSS-PEYTP 1781
Score = 33.5 bits (75), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1670 TSPSYSPTSPSYSPTSP 1686
Score = 63.9 bits (154), Expect(2) = 7e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + SP YSPSSP+++P S YSP+ P YSP+S +Y+P
Sbjct: 1746 PTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS-PKYSP 1802
Score = 33.5 bits (75), Expect(2) = 7e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1691 TSPSYSPTSPSYSPTSP 1707
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1767 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1823
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1712 TSPSYSPTSPSYSPTSP 1728
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1809 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1868
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1782 TSPKYSPTSPKYSPTSP 1798
Score = 62.0 bits (149), Expect(2) = 3e-12
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1795 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1851
Score = 33.5 bits (75), Expect(2) = 3e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1747 TSPSYSPTSPSYSPTSP 1763
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1599 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1655
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1579 SPSYSPTSPAYEPRSP 1594
Score = 59.7 bits (143), Expect(2) = 6e-11
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1788 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1844
Score = 31.2 bits (69), Expect(2) = 6e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS + P+Y+PTSP
Sbjct: 1733 TSPNYSPSRPNYTPTSP 1749
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1613 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1669
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1601 SPSYSPTSPSYSPTSP 1616
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1616 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1675
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1676 PTSPS-YSP 1683
Score = 53.9 bits (128), Expect(2) = 6e-10
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
P YSP+SP+YSP SP SP+YSPS P ++P S YSP+ P YSP+S +Y
Sbjct: 1711 PTSPSYSPTSPSYSPTSPSYSP----TSPNYSPSRPNYTPTSPSYSPTSPSYSPTS-PKY 1765
Query: 350 TP 345
TP
Sbjct: 1766 TP 1767
Score = 33.5 bits (75), Expect(2) = 6e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1663 TSPSYSPTSPSYSPTSP 1679
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1597 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1648
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1606 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1662
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1597 YTPQSPSYSPTSP 1609
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1823 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1877
Score = 61.6 bits (148), Expect = 4e-08
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYS 372
P S PN S Y+P+SP+YSP+SP S SP Y+P+SP +SPS+ Y+P+ P YS
Sbjct: 1728 PSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYS 1787
Query: 371 PSSTSQYTP 345
P+S +Y+P
Sbjct: 1788 PTS-PKYSP 1795
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1837 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1894
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1789 TSPKYSPTSPKYSPTSP 1805
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS+P Y+
Sbjct: 1686 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYT 1745
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1746 PTSPS-YSP 1753
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1644 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1703
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1704 PTSPS-YSP 1711
[60][TOP]
>UniRef100_UPI00005A0B2B PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 22 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2B
Length = 1892
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1644 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1700
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1617 TSPNYSPTSPSYSPTSP 1633
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1665 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1721
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1672 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1728
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1624 TSPSYSPTSPSYSPTSP 1640
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1631 TSPSYSPTSPSYSPTSP 1647
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPS + YTP
Sbjct: 1686 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPN-YTP 1742
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1638 TSPSYSPTSPSYSPTSP 1654
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1679 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1735
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1700 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1756
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1645 TSPSYSPTSPSYSPTSP 1661
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1652 TSPSYSPTSPSYSPTSP 1668
Score = 64.7 bits (156), Expect(2) = 4e-13
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSPS P + SP YSP+SP +SP S Y+P+ P YSPSS +YTP
Sbjct: 1721 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSS-PEYTP 1777
Score = 33.5 bits (75), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1666 TSPSYSPTSPSYSPTSP 1682
Score = 63.9 bits (154), Expect(2) = 7e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + SP YSPSSP+++P S YSP+ P YSP+S +Y+P
Sbjct: 1742 PTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS-PKYSP 1798
Score = 33.5 bits (75), Expect(2) = 7e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1687 TSPSYSPTSPSYSPTSP 1703
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1763 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1819
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1708 TSPSYSPTSPSYSPTSP 1724
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1805 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1864
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1778 TSPKYSPTSPKYSPTSP 1794
Score = 62.0 bits (149), Expect(2) = 3e-12
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1791 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1847
Score = 33.5 bits (75), Expect(2) = 3e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1743 TSPSYSPTSPSYSPTSP 1759
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1595 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1651
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1575 SPSYSPTSPAYEPRSP 1590
Score = 59.7 bits (143), Expect(2) = 6e-11
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1784 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1840
Score = 31.2 bits (69), Expect(2) = 6e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS + P+Y+PTSP
Sbjct: 1729 TSPNYSPSRPNYTPTSP 1745
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1609 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1665
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1597 SPSYSPTSPSYSPTSP 1612
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1612 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1671
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1672 PTSPS-YSP 1679
Score = 53.9 bits (128), Expect(2) = 6e-10
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
P YSP+SP+YSP SP SP+YSPS P ++P S YSP+ P YSP+S +Y
Sbjct: 1707 PTSPSYSPTSPSYSPTSPSYSP----TSPNYSPSRPNYTPTSPSYSPTSPSYSPTS-PKY 1761
Query: 350 TP 345
TP
Sbjct: 1762 TP 1763
Score = 33.5 bits (75), Expect(2) = 6e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1659 TSPSYSPTSPSYSPTSP 1675
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1593 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1644
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1602 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1658
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1593 YTPQSPSYSPTSP 1605
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1819 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1873
Score = 61.6 bits (148), Expect = 4e-08
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYS 372
P S PN S Y+P+SP+YSP+SP S SP Y+P+SP +SPS+ Y+P+ P YS
Sbjct: 1724 PSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYS 1783
Query: 371 PSSTSQYTP 345
P+S +Y+P
Sbjct: 1784 PTS-PKYSP 1791
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1833 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1890
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1785 TSPKYSPTSPKYSPTSP 1801
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS+P Y+
Sbjct: 1682 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYT 1741
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1742 PTSPS-YSP 1749
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1640 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1699
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1700 PTSPS-YSP 1707
[61][TOP]
>UniRef100_UPI00005A0B29 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 20 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B29
Length = 1891
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1627 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1683
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1600 TSPNYSPTSPSYSPTSP 1616
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1648 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1704
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1655 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1711
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1607 TSPSYSPTSPSYSPTSP 1623
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1614 TSPSYSPTSPSYSPTSP 1630
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPS + YTP
Sbjct: 1669 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPN-YTP 1725
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1621 TSPSYSPTSPSYSPTSP 1637
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1662 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1718
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1683 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1739
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1628 TSPSYSPTSPSYSPTSP 1644
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1635 TSPSYSPTSPSYSPTSP 1651
Score = 65.1 bits (157), Expect(2) = 3e-13
Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS-QYTP 345
P YSP+SP YSPS P + SP YSP+SP +SP S Y+P P YSP+ TS +YTP
Sbjct: 1704 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTP 1762
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1649 TSPSYSPTSPSYSPTSP 1665
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1755 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1811
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1762 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1818
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1698 TSPSYSPTSPSYSPTSP 1714
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1726 TSPSYSPTSPSYSPTSP 1742
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1804 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1863
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1777 TSPKYSPTSPKYSPTSP 1793
Score = 60.8 bits (146), Expect(2) = 6e-12
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S P+Y+P+SP +SP S YSP+ P Y+P S + T
Sbjct: 1697 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPT 1756
Query: 338 NDK 330
+ K
Sbjct: 1757 SPK 1759
Score = 33.5 bits (75), Expect(2) = 6e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1642 TSPSYSPTSPSYSPTSP 1658
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1578 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1634
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1558 SPSYSPTSPAYEPRSP 1573
Score = 62.0 bits (149), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1790 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1846
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 1756 TSPKYTPTSPSYSPSSP 1772
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1592 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1648
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1580 SPSYSPTSPSYSPTSP 1595
Score = 59.7 bits (143), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1783 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1839
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + P Y+PTSP
Sbjct: 1763 TSPSYSPSSPEYTPTSP 1779
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1595 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1654
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1655 PTSPS-YSP 1662
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1576 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1627
Score = 63.9 bits (154), Expect = 7e-09
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 7/71 (9%)
Frame = -3
Query: 536 PDISIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP---STGYSPSQPG 378
P S PN S Y+P+SP+YSP+SP S SP+Y+P SP +SP S Y+P+ P
Sbjct: 1707 PSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPS 1766
Query: 377 YSPSSTSQYTP 345
YSPSS +YTP
Sbjct: 1767 YSPSS-PEYTP 1776
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1585 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1641
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1576 YTPQSPSYSPTSP 1588
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1818 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1872
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1832 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1889
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1784 TSPKYSPTSPKYSPTSP 1800
Score = 60.5 bits (145), Expect = 8e-08
Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + + PN S +P+SP Y+P+SP S SP+Y+P+SP++SP S YSP+ P YSP+S
Sbjct: 1742 PNYTPMSPNYSP-TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1800
Query: 359 SQYTPQT 339
+ Y+P T
Sbjct: 1801 T-YSPTT 1806
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS+P Y+
Sbjct: 1665 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYT 1724
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1725 PTSPS-YSP 1732
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1623 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1682
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1683 PTSPS-YSP 1690
[62][TOP]
>UniRef100_UPI00005A0B2C PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 23 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2C
Length = 1888
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1658 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1714
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1631 TSPNYSPTSPSYSPTSP 1647
Score = 68.6 bits (166), Expect(2) = 3e-14
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS--TSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPSS + +YTP
Sbjct: 1700 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTP 1759
Score = 33.5 bits (75), Expect(2) = 3e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1645 TSPSYSPTSPSYSPTSP 1661
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1679 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1735
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1638 TSPSYSPTSPSYSPTSP 1654
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST----GYSPSQPGYSPSSTSQYT 348
P YSP+SP+YSP+SP S SP YSP+SP +SPS+ Y+P+ P YSPSS +YT
Sbjct: 1714 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSS-PEYT 1772
Query: 347 P 345
P
Sbjct: 1773 P 1773
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1659 TSPSYSPTSPSYSPTSP 1675
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1801 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1860
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1774 TSPKYSPTSPKYSPTSP 1790
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1609 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1665
Score = 60.5 bits (145), Expect(2) = 8e-12
Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 4/61 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSP-STGYSPSQPGYSPSSTSQYT 348
P YSP+SP+YSP+SP S SP+YSPSSP +++P S YSPS P Y+P+S +Y+
Sbjct: 1721 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTS-PKYS 1779
Query: 347 P 345
P
Sbjct: 1780 P 1780
Score = 60.5 bits (145), Expect(2) = 8e-12
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYN---SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYT 348
P YSP+SP YSPSSP + + SP YSPSSP+++P S YSP+ P YSP+S +Y+
Sbjct: 1735 PTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS-PKYS 1793
Query: 347 P 345
P
Sbjct: 1794 P 1794
Score = 60.5 bits (145), Expect(2) = 8e-12
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP++P++SP S YSP+ P Y+P+S +Y+P
Sbjct: 1773 PTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS-PKYSP 1829
Score = 33.5 bits (75), Expect(2) = 8e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1666 TSPSYSPTSPSYSPTSP 1682
Score = 33.5 bits (75), Expect(2) = 8e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1680 TSPSYSPTSPSYSPTSP 1696
Score = 33.5 bits (75), Expect(2) = 8e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1722 TSPSYSPTSPSYSPTSP 1738
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1589 SPSYSPTSPAYEPRSP 1604
Score = 60.8 bits (146), Expect(2) = 2e-11
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP++P YSP+SP S SP Y+P+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1794 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPT-YSP 1850
Score = 31.6 bits (70), Expect(2) = 2e-11
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1781 TSPKYSPTSPKYSPTSP 1797
Score = 58.2 bits (139), Expect(2) = 4e-11
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 4/61 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPY---NSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYT 348
P YSP+SP+YSP+SP +S SP Y+P+SP +SPS+ Y+P+ P YSP+S +Y+
Sbjct: 1728 PTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS-PKYS 1786
Query: 347 P 345
P
Sbjct: 1787 P 1787
Score = 33.5 bits (75), Expect(2) = 4e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1673 TSPSYSPTSPSYSPTSP 1689
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1623 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1679
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1611 SPSYSPTSPSYSPTSP 1626
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1626 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1685
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1686 PTSPS-YSP 1693
Score = 65.9 bits (159), Expect = 2e-09
Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN S SP+SP Y+P+SP S SP+Y+P+SP++SP S YSP+ P YSP+S
Sbjct: 1738 PSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1797
Query: 359 SQYTPQT 339
+ Y+P T
Sbjct: 1798 T-YSPTT 1803
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1658
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1616 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1672
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1607 YTPQSPSYSPTSP 1619
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1815 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1869
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1829 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1886
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1795 TSPTYSPTTPKYSPTSP 1811
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1654 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1713
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1714 PTSPS-YSP 1721
Score = 57.0 bits (136), Expect = 9e-07
Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1682 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1741
Query: 371 PSSTSQYTPQT 339
P+S + Y+P +
Sbjct: 1742 PTSPN-YSPSS 1751
[63][TOP]
>UniRef100_UPI00005A0B1B PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 7 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1B
Length = 1858
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1589 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1645
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1562 TSPNYSPTSPSYSPTSP 1578
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1610 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1617 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1569 TSPSYSPTSPSYSPTSP 1585
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1576 TSPSYSPTSPSYSPTSP 1592
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPS + YTP
Sbjct: 1631 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPN-YTP 1687
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 32/58 (55%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + +SP+YSP+SP +SP S Y+P+ P YSPSS +YTP
Sbjct: 1687 PTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPSS-PEYTP 1743
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1583 TSPSYSPTSPSYSPTSP 1599
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1632 TSPSYSPTSPSYSPTSP 1648
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1624 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1680
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1701
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1590 TSPSYSPTSPSYSPTSP 1606
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1597 TSPSYSPTSPSYSPTSP 1613
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1729 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1785
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1688 TSPSYSPTSPSYSPTSP 1704
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1771 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1830
Score = 62.8 bits (151), Expect(2) = 2e-12
Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSPS P + SP YSP+SP +SP S Y+P P YSP+S S Y+P
Sbjct: 1666 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPS-YSP 1722
Score = 33.5 bits (75), Expect(2) = 2e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1611 TSPSYSPTSPSYSPTSP 1627
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1744 TSPKYSPTSPKYSPTSP 1760
Score = 62.0 bits (149), Expect(2) = 3e-12
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1757 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1813
Score = 33.5 bits (75), Expect(2) = 3e-12
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS T PSYSPTSP
Sbjct: 1710 SPNYSPTSPSYSPTSP 1725
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1540 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1596
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1520 SPSYSPTSPAYEPRSP 1535
Score = 59.7 bits (143), Expect(2) = 8e-11
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1750 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1806
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1554 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1610
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1542 SPSYSPTSPSYSPTSP 1557
Score = 30.8 bits (68), Expect(2) = 8e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ P+YSPTSP
Sbjct: 1702 TSPNYTPMSPNYSPTSP 1718
Score = 54.3 bits (129), Expect(2) = 5e-10
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
P YSP+SP+YSP SP SP+YSPS P ++P S YSP+ P YSP+S + Y
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSP----TSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPN-Y 1706
Query: 350 TPQT 339
TP +
Sbjct: 1707 TPMS 1710
Score = 33.5 bits (75), Expect(2) = 5e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1604 TSPSYSPTSPSYSPTSP 1620
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1557 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1616
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1617 PTSPS-YSP 1624
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1538 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1589
Score = 64.3 bits (155), Expect = 6e-09
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + + PN YSP+SP+YSP+SP + SP YSPSSP+++P S YSP+ P YSP+S
Sbjct: 1704 PNYTPMSPN---YSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS- 1759
Query: 359 SQYTP 345
+Y+P
Sbjct: 1760 PKYSP 1764
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1547 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1603
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1538 YTPQSPSYSPTSP 1550
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1785 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1839
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1799 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1856
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1751 TSPKYSPTSPKYSPTSP 1767
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS+P Y+
Sbjct: 1627 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYT 1686
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1687 PTSPS-YSP 1694
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1585 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1644
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1645 PTSPS-YSP 1652
[64][TOP]
>UniRef100_P35074 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
briggsae RepID=RPB1_CAEBR
Length = 1853
Score = 68.9 bits (167), Expect(2) = 2e-14
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 4/61 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST----GYSPSQPGYSPSSTSQYT 348
P+ YSP+SPTYSP+SP S SP YSP+SP +SP++ GYSPS P YSPSS + Y+
Sbjct: 1674 PSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPT-YS 1732
Query: 347 P 345
P
Sbjct: 1733 P 1733
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1619 TSPSYSPTSPSYSPTSP 1635
Score = 68.9 bits (167), Expect(2) = 7e-14
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 6/63 (9%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPS-----STSQ 354
P+ YSPSSPTYSP+SP S SP YSP+SPQ+SPS+ Y+PS P Y+P+ S+ Q
Sbjct: 1719 PSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRAFSSPQ 1778
Query: 353 YTP 345
Y+P
Sbjct: 1779 YSP 1781
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P +
Sbjct: 1618 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPSS 1676
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1588 TSPHYSPTSPSYSPTSP 1604
Score = 32.0 bits (71), Expect(2) = 7e-14
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1682 TSPTYSPTSPTYSPTSP 1698
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSPSSP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1646 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPT-YSP 1702
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1626 TSPSYSPTSPSYSPTSP 1642
Score = 65.5 bits (158), Expect(2) = 3e-13
Identities = 35/61 (57%), Positives = 43/61 (70%), Gaps = 4/61 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPD---YSPSSPQFSPST-GYSPSQPGYSPSSTSQYT 348
P YSP+SPTYSP+SP S SP YSPSSP++SPS+ YSP+ P YSP+S QY+
Sbjct: 1688 PTSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPSYSPTS-PQYS 1746
Query: 347 P 345
P
Sbjct: 1747 P 1747
Score = 65.5 bits (158), Expect(2) = 3e-13
Identities = 35/63 (55%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPD---YSPSSPQFSP-STGYSPSQPGYSPSSTSQYT 348
P YSP+SPTYSP+SP G SP YSPSSP +SP S YSP+ P YSP+S QY+
Sbjct: 1695 PTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTS-PQYS 1753
Query: 347 PQT 339
P +
Sbjct: 1754 PSS 1756
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1633 TSPSYSPTSPSYSPTSP 1649
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1640 TSPSYSPTSPSYSPTSP 1656
Score = 63.5 bits (153), Expect(2) = 9e-13
Identities = 35/61 (57%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQ---FSPST-GYSPSQPGYSPSSTSQYT 348
P YSP+SPTYSP+SP S SP YSP+SP +SPS+ YSPS P YSP+S S Y+
Sbjct: 1681 PTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPS-YS 1739
Query: 347 P 345
P
Sbjct: 1740 P 1740
Score = 33.5 bits (75), Expect(2) = 9e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1647 TSPSYSPTSPSYSPTSP 1663
Score = 65.1 bits (157), Expect(2) = 1e-12
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS+ YSP+ P YSP+S + Y+P
Sbjct: 1639 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPT-YSP 1695
Score = 31.6 bits (70), Expect(2) = 1e-12
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1613 SPSYSPTSPSYSPTSP 1628
Score = 62.4 bits (150), Expect(2) = 2e-12
Identities = 35/63 (55%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTY---SPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYT 348
P YSP+SP+Y SPSSP S SP YSP+SP +SP S YSP+ P YSPSS + YT
Sbjct: 1702 PTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPT-YT 1760
Query: 347 PQT 339
P +
Sbjct: 1761 PSS 1763
Score = 33.5 bits (75), Expect(2) = 2e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1654 TSPSYSPTSPSYSPTSP 1670
Score = 66.2 bits (160), Expect(2) = 8e-12
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1616 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1667
Score = 63.5 bits (153), Expect(2) = 8e-12
Identities = 33/59 (55%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQ 342
P+ YSP+SPTY+PS G S YSPSSP +SPS+ YSP+ P YSPSS + Y PQ
Sbjct: 1795 PSSPQYSPTSPTYTPSPADQPGTSNQYSPSSPTYSPSSPTYSPASPSYSPSSPT-YDPQ 1852
Score = 62.0 bits (149), Expect(2) = 8e-12
Identities = 33/66 (50%), Positives = 41/66 (62%), Gaps = 7/66 (10%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-------STGYSPSQPGYSPSSTS 357
P YSP+SP YSP+SP S SP Y+PSSP ++P S YSP+ P YSP+S S
Sbjct: 1733 PTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRAFSSPQYSPTSPTYSPTSPS 1792
Query: 356 QYTPQT 339
YTP +
Sbjct: 1793 -YTPSS 1797
Score = 62.0 bits (149), Expect(2) = 8e-12
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 8/60 (13%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG--------YSPSQPGYSPSSTSQYTP 345
YSP+SPTYSP+SP + SP YSP+SP ++PS YSPS P YSPSS + Y+P
Sbjct: 1779 YSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPADQPGTSNQYSPSSPTYSPSSPT-YSP 1837
Score = 32.0 bits (71), Expect(2) = 8e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1689 TSPTYSPTSPTYSPTSP 1705
Score = 32.0 bits (71), Expect(2) = 8e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P YSPTSP
Sbjct: 1734 TSPSYSPTSPQYSPTSP 1750
Score = 30.4 bits (67), Expect(2) = 8e-12
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T P+YSPTSP
Sbjct: 1775 SSPQYSPTSPTYSPTSP 1791
Score = 27.7 bits (60), Expect(2) = 8e-12
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP +S T P YSPTSP
Sbjct: 1582 SPGFSMTSPHYSPTSP 1597
Score = 70.5 bits (171), Expect = 8e-11
Identities = 38/65 (58%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S P+ YSPSSP YSPSSP S SP YSP+SPQ+SP S YSPS P Y+PSS
Sbjct: 1705 PTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSP 1764
Query: 359 SQYTP 345
+ Y P
Sbjct: 1765 T-YNP 1768
Score = 65.9 bits (159), Expect = 2e-09
Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSG---VSPDYSPSSPQFSP-STGYSPSQPGYSP 369
P S+ P+ YSP+SP+YSP+SP + G VSP YSP+SP +SP S YSP+ P YSP
Sbjct: 1583 PGFSMTSPH---YSPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSP 1639
Query: 368 SSTSQYTP 345
+S S Y+P
Sbjct: 1640 TSPS-YSP 1646
Score = 62.8 bits (151), Expect = 2e-08
Identities = 34/65 (52%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S P SP SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1597 PSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1656
Query: 359 SQYTP 345
S Y+P
Sbjct: 1657 S-YSP 1660
Score = 57.0 bits (136), Expect = 9e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS P YS
Sbjct: 1621 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYS 1680
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1681 PTSPT-YSP 1688
Score = 56.2 bits (134), Expect = 2e-06
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
Frame = -3
Query: 503 IYSPSSPTYSPSSPYNSGVSPDYSPSSP----QFSPSTGYSPSQPGYSPSSTSQYTP 345
+YSP+SP +S +SP+ S SP YSP+SP Q S YSP+ P YSP+S S Y+P
Sbjct: 1577 VYSPASPGFSMTSPHYSPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPS-YSP 1632
Score = 56.2 bits (134), Expect = 2e-06
Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 7/73 (9%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSPSSP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1649 PSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYS 1708
Query: 371 PSSTSQ--YTPQT 339
P+S S Y+P +
Sbjct: 1709 PTSPSYEGYSPSS 1721
[65][TOP]
>UniRef100_UPI00005A0B1E PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 9 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1E
Length = 1851
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1596 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1652
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1569 TSPNYSPTSPSYSPTSP 1585
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1617 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1624 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1680
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1576 TSPSYSPTSPSYSPTSP 1592
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1583 TSPSYSPTSPSYSPTSP 1599
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPS + YTP
Sbjct: 1638 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPN-YTP 1694
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1590 TSPSYSPTSPSYSPTSP 1606
Score = 66.2 bits (160), Expect(2) = 2e-13
Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P +
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSPSS 1710
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1597 TSPSYSPTSPSYSPTSP 1613
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1631 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1687
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1604 TSPSYSPTSPSYSPTSP 1620
Score = 63.5 bits (153), Expect(2) = 9e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSPSSP S SP Y+P+SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1694 PTSPSYSPTSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS-PKYSP 1750
Score = 33.5 bits (75), Expect(2) = 9e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1639 TSPSYSPTSPSYSPTSP 1655
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1715 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1771
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1722 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1778
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1660 TSPSYSPTSPSYSPTSP 1676
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1667 TSPSYSPTSPSYSPTSP 1683
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1764 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1823
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1737 TSPKYSPTSPKYSPTSP 1753
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1547 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1603
Score = 62.0 bits (149), Expect(2) = 8e-12
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1750 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1806
Score = 32.0 bits (71), Expect(2) = 8e-12
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSP+SP
Sbjct: 1695 TSPSYSPTSPSYSPSSP 1711
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1527 SPSYSPTSPAYEPRSP 1542
Score = 59.7 bits (143), Expect(2) = 4e-11
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1743 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1799
Score = 32.0 bits (71), Expect(2) = 4e-11
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + PSYSPTSP
Sbjct: 1702 TSPSYSPSSPSYSPTSP 1718
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1561 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1617
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1549 SPSYSPTSPSYSPTSP 1564
Score = 55.8 bits (133), Expect(2) = 2e-10
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 7/64 (10%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP---GYSPS---STS 357
P YSP+SP+YSP+SP S SP+YSPS P ++P S YSP+ P SPS ++
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPSSPSYSPTSP 1718
Query: 356 QYTP 345
+YTP
Sbjct: 1719 KYTP 1722
Score = 33.5 bits (75), Expect(2) = 2e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1611 TSPSYSPTSPSYSPTSP 1627
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1564 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1623
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1624 PTSPS-YSP 1631
Score = 66.6 bits (161), Expect = 1e-09
Identities = 36/65 (55%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN YSPS P Y+P+SP S SP YSPSSP +SP S Y+P+ P YSPSS
Sbjct: 1676 PSYSPTSPN---YSPSRPNYTPTSPSYSPTSPSYSPSSPSYSPTSPKYTPTSPSYSPSS- 1731
Query: 359 SQYTP 345
+YTP
Sbjct: 1732 PEYTP 1736
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1545 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1596
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1554 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1610
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1545 YTPQSPSYSPTSP 1557
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1778 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1832
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1792 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1849
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1744 TSPKYSPTSPKYSPTSP 1760
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS+P Y+
Sbjct: 1634 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYT 1693
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1694 PTSPS-YSP 1701
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1592 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1651
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1652 PTSPS-YSP 1659
[66][TOP]
>UniRef100_UPI00005A0B1F PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 10 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1F
Length = 1840
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1592 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1648
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1565 TSPNYSPTSPSYSPTSP 1581
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1613 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1669
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1620 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1676
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1572 TSPSYSPTSPSYSPTSP 1588
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1579 TSPSYSPTSPSYSPTSP 1595
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPS + YTP
Sbjct: 1634 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPN-YTP 1690
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1586 TSPSYSPTSPSYSPTSP 1602
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1627 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1683
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1648 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1704
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1593 TSPSYSPTSPSYSPTSP 1609
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1600 TSPSYSPTSPSYSPTSP 1616
Score = 64.7 bits (156), Expect(2) = 4e-13
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSPS P + SP YSP+SP +SP S Y+P+ P YSPSS +YTP
Sbjct: 1669 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSS-PEYTP 1725
Score = 33.5 bits (75), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1614 TSPSYSPTSPSYSPTSP 1630
Score = 63.9 bits (154), Expect(2) = 7e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + SP YSPSSP+++P S YSP+ P YSP+S +Y+P
Sbjct: 1690 PTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS-PKYSP 1746
Score = 33.5 bits (75), Expect(2) = 7e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1635 TSPSYSPTSPSYSPTSP 1651
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1711 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 1767
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1656 TSPSYSPTSPSYSPTSP 1672
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1753 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1812
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1726 TSPKYSPTSPKYSPTSP 1742
Score = 62.0 bits (149), Expect(2) = 3e-12
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1739 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1795
Score = 33.5 bits (75), Expect(2) = 3e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1691 TSPSYSPTSPSYSPTSP 1707
Score = 59.7 bits (143), Expect(2) = 6e-11
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 1732 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 1788
Score = 31.2 bits (69), Expect(2) = 6e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS + P+Y+PTSP
Sbjct: 1677 TSPNYSPSRPNYTPTSP 1693
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1557 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1613
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1545 SPSYSPTSPSYSPTSP 1560
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1560 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1619
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1620 PTSPS-YSP 1627
Score = 53.9 bits (128), Expect(2) = 6e-10
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
P YSP+SP+YSP SP SP+YSPS P ++P S YSP+ P YSP+S +Y
Sbjct: 1655 PTSPSYSPTSPSYSPTSPSYSP----TSPNYSPSRPNYTPTSPSYSPTSPSYSPTS-PKY 1709
Query: 350 TP 345
TP
Sbjct: 1710 TP 1711
Score = 33.5 bits (75), Expect(2) = 6e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1607 TSPSYSPTSPSYSPTSP 1623
Score = 67.4 bits (163), Expect = 7e-10
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1543 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1599
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1541 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1592
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1550 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1606
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1541 YTPQSPSYSPTSP 1553
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1767 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1821
Score = 61.6 bits (148), Expect = 4e-08
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYS 372
P S PN S Y+P+SP+YSP+SP S SP Y+P+SP +SPS+ Y+P+ P YS
Sbjct: 1672 PSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYS 1731
Query: 371 PSSTSQYTP 345
P+S +Y+P
Sbjct: 1732 PTS-PKYSP 1739
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1781 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1838
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1733 TSPKYSPTSPKYSPTSP 1749
Score = 58.2 bits (139), Expect = 4e-07
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Frame = -3
Query: 503 IYSPSSPTYSPSSPYN-SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+YSP+SP Y P SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1525 LYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPS-YSP 1578
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS+P Y+
Sbjct: 1630 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYT 1689
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1690 PTSPS-YSP 1697
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1588 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1647
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1648 PTSPS-YSP 1655
[67][TOP]
>UniRef100_UPI0001796DD3 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase II subunit A) (DNA-directed RNA polymerase III
largest subunit) n=1 Tax=Equus caballus
RepID=UPI0001796DD3
Length = 1834
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1632 TSPNYSPTSPSYSPTSP 1648
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + YTP
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPN-YTP 1757
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1646 TSPSYSPTSPSYSPTSP 1662
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1639 TSPSYSPTSPSYSPTSP 1655
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP ++P S YSP+ P YSP+S + YTP
Sbjct: 1722 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPN-YTP 1778
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1667 TSPSYSPTSPSYSPTSP 1683
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + SP+YSP+SP +SP+T YSP+ P YSP+S Y+P
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTTPSYSPTSPSYSPTSPG-YSP 1813
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1702 TSPSYSPTSPSYSPTSP 1718
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1590 SPSYSPTSPAYEPRSP 1605
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1680
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1612 SPSYSPTSPSYSPTSP 1627
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1627 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1686
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1687 PTSPS-YSP 1694
Score = 65.9 bits (159), Expect = 2e-09
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ S PN Y+P+SP+YSP+SP S SP+Y+P+SP +SP S YSP+ P YSP+S
Sbjct: 1746 PNYSPTSPN---YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTTPSYSPTSP 1802
Query: 359 SQYTP 345
S Y+P
Sbjct: 1803 S-YSP 1806
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 63.9 bits (154), Expect = 7e-09
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN YSP+SP Y+P+SP S SP YSP+SP ++P S YSP+ P YSP +T
Sbjct: 1739 PSYSPTSPN---YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP-TT 1794
Query: 359 SQYTP 345
Y+P
Sbjct: 1795 PSYSP 1799
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1617 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1673
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1608 YTPQSPSYSPTSP 1620
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1714
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1715 PTSPS-YSP 1722
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1683 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1742
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1743 PTSPN-YSP 1750
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP+Y+P+SP +SP S YSP+ P Y+
Sbjct: 1718 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 1777
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1778 PTSPN-YSP 1785
Score = 54.3 bits (129), Expect = 6e-06
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + PN YSP+SP+YSP++P S SP YSP+SP +SP S YS + P SP +
Sbjct: 1774 PNYTPTSPN---YSPTSPSYSPTTPSYSPTSPSYSPTSPGYSPTSPTYSLTSPAISPDDS 1830
Query: 359 SQ 354
+
Sbjct: 1831 DE 1832
[68][TOP]
>UniRef100_UPI00005A0B27 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 18 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B27
Length = 1831
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1577 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1633
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1550 TSPNYSPTSPSYSPTSP 1566
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1598 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1654
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1605 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1661
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1557 TSPSYSPTSPSYSPTSP 1573
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1564 TSPSYSPTSPSYSPTSP 1580
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPS + YTP
Sbjct: 1619 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPN-YTP 1675
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1571 TSPSYSPTSPSYSPTSP 1587
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1612 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1668
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1633 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1689
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1578 TSPSYSPTSPSYSPTSP 1594
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1585 TSPSYSPTSPSYSPTSP 1601
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P+ Y+P+SP YSP+SP S SP YSP+SP +SP+T YSP+ P YSP+S YTP
Sbjct: 1709 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS-PVYTP 1765
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1676 TSPSYSPTSPSYSPTSP 1692
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1744 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1803
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1717 TSPKYSPTSPKYSPTSP 1733
Score = 62.4 bits (150), Expect(2) = 2e-12
Identities = 31/63 (49%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS-----STSQ 354
P YSP+SP YSPS P + SP YSP+SP +SP S Y+P P YSP+ S+ +
Sbjct: 1654 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPSYSPSSPE 1713
Query: 353 YTP 345
YTP
Sbjct: 1714 YTP 1716
Score = 33.5 bits (75), Expect(2) = 2e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1599 TSPSYSPTSPSYSPTSP 1615
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1528 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1584
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1508 SPSYSPTSPAYEPRSP 1523
Score = 58.2 bits (139), Expect(2) = 4e-11
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 7/64 (10%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPY------NSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 357
P YSP+SP+YSP+SP N +P YSPSSP+++P S YSP+ P YSP+S
Sbjct: 1675 PTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPSYSPSSPEYTPTSPKYSPTSPKYSPTS-P 1733
Query: 356 QYTP 345
+Y+P
Sbjct: 1734 KYSP 1737
Score = 33.5 bits (75), Expect(2) = 4e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1620 TSPSYSPTSPSYSPTSP 1636
Score = 62.0 bits (149), Expect(2) = 6e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 1730 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 1786
Score = 28.9 bits (63), Expect(2) = 6e-11
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P+Y+P SP
Sbjct: 1683 TSPSYSPTSPNYTPMSP 1699
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1542 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1598
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1530 SPSYSPTSPSYSPTSP 1545
Score = 54.3 bits (129), Expect(2) = 5e-10
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
P YSP+SP+YSP SP SP+YSPS P ++P S YSP+ P YSP+S + Y
Sbjct: 1640 PTSPSYSPTSPSYSPTSPSYSP----TSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPN-Y 1694
Query: 350 TPQT 339
TP +
Sbjct: 1695 TPMS 1698
Score = 33.5 bits (75), Expect(2) = 5e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1592 TSPSYSPTSPSYSPTSP 1608
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1545 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1604
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1605 PTSPS-YSP 1612
Score = 66.2 bits (160), Expect = 1e-09
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
Frame = -3
Query: 536 PDISIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSP 369
P S PN S Y+P+SP+YSP+SP S SP+Y+P SP +SP+ YSPS P Y+P
Sbjct: 1657 PSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPSYSPSSPEYTP 1716
Query: 368 SSTSQYTP 345
+S +Y+P
Sbjct: 1717 TS-PKYSP 1723
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1526 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1577
Score = 63.9 bits (154), Expect = 7e-09
Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
Frame = -3
Query: 536 PDISIVFPNIS---IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSP 369
P+ + + PN S YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP
Sbjct: 1692 PNYTPMSPNYSPTPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSP 1751
Query: 368 SSTSQYTP 345
+S + Y+P
Sbjct: 1752 TSPT-YSP 1758
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1535 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1591
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1526 YTPQSPSYSPTSP 1538
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1758 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1812
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1772 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1829
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1724 TSPKYSPTSPKYSPTSP 1740
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS+P Y+
Sbjct: 1615 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYT 1674
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1675 PTSPS-YSP 1682
Score = 58.2 bits (139), Expect = 4e-07
Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN Y+P SP YSP+ Y S SP+Y+P+SP++SP S YSP+ P YSP+S
Sbjct: 1685 PSYSPTSPN---YTPMSPNYSPTPSY-SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1740
Query: 359 SQYTPQT 339
+ Y+P T
Sbjct: 1741 T-YSPTT 1746
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1573 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1632
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1633 PTSPS-YSP 1640
[69][TOP]
>UniRef100_UPI00005A0B17 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B17
Length = 1788
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1658 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1714
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1631 TSPNYSPTSPSYSPTSP 1647
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1679 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1735
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1686 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1742
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1638 TSPSYSPTSPSYSPTSP 1654
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1645 TSPSYSPTSPSYSPTSP 1661
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPS + YTP
Sbjct: 1700 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPN-YTP 1756
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1652 TSPSYSPTSPSYSPTSP 1668
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1693 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1749
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1714 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1770
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1659 TSPSYSPTSPSYSPTSP 1675
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1666 TSPSYSPTSPSYSPTSP 1682
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1609 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1665
Score = 60.5 bits (145), Expect(2) = 8e-12
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P YSP+SP YSPS P + SP YSP+SP +SP S Y+P P YSP+S
Sbjct: 1735 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTS 1786
Score = 33.5 bits (75), Expect(2) = 8e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1680 TSPSYSPTSPSYSPTSP 1696
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1589 SPSYSPTSPAYEPRSP 1604
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1623 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1679
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1611 SPSYSPTSPSYSPTSP 1626
Score = 54.3 bits (129), Expect(2) = 5e-10
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
P YSP+SP+YSP SP SP+YSPS P ++P S YSP+ P YSP+S + Y
Sbjct: 1721 PTSPSYSPTSPSYSPTSPSYSP----TSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPN-Y 1775
Query: 350 TPQT 339
TP +
Sbjct: 1776 TPMS 1779
Score = 33.5 bits (75), Expect(2) = 5e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1673 TSPSYSPTSPSYSPTSP 1689
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1626 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1685
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1686 PTSPS-YSP 1693
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1658
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1616 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1672
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1607 YTPQSPSYSPTSP 1619
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS+P Y+
Sbjct: 1696 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYT 1755
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1756 PTSPS-YSP 1763
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1654 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1713
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1714 PTSPS-YSP 1721
Score = 43.5 bits (101), Expect(2) = 7e-07
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP 420
P YSP+SP+YSP+SP + +SP+YSP+SP
Sbjct: 1756 PTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1787
Score = 33.5 bits (75), Expect(2) = 7e-07
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1701 TSPSYSPTSPSYSPTSP 1717
[70][TOP]
>UniRef100_UPI00005A0B1A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 6 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1A
Length = 1767
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1693
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1610 TSPNYSPTSPSYSPTSP 1626
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1658 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1714
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1665 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1721
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1617 TSPSYSPTSPSYSPTSP 1633
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1624 TSPSYSPTSPSYSPTSP 1640
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPS + YTP
Sbjct: 1679 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPN-YTP 1735
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1631 TSPSYSPTSPSYSPTSP 1647
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1672 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1728
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1693 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1749
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1638 TSPSYSPTSPSYSPTSP 1654
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1645 TSPSYSPTSPSYSPTSP 1661
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1588 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1644
Score = 60.5 bits (145), Expect(2) = 8e-12
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P YSP+SP YSPS P + SP YSP+SP +SP S Y+P P YSP+S
Sbjct: 1714 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTS 1765
Score = 33.5 bits (75), Expect(2) = 8e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1659 TSPSYSPTSPSYSPTSP 1675
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1568 SPSYSPTSPAYEPRSP 1583
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1602 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1658
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1590 SPSYSPTSPSYSPTSP 1605
Score = 54.3 bits (129), Expect(2) = 5e-10
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
P YSP+SP+YSP SP SP+YSPS P ++P S YSP+ P YSP+S + Y
Sbjct: 1700 PTSPSYSPTSPSYSPTSPSYSP----TSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPN-Y 1754
Query: 350 TPQT 339
TP +
Sbjct: 1755 TPMS 1758
Score = 33.5 bits (75), Expect(2) = 5e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1652 TSPSYSPTSPSYSPTSP 1668
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1605 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1664
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1665 PTSPS-YSP 1672
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1586 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1637
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1595 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1651
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1586 YTPQSPSYSPTSP 1598
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS+P Y+
Sbjct: 1675 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYT 1734
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1735 PTSPS-YSP 1742
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1633 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1692
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1693 PTSPS-YSP 1700
Score = 43.5 bits (101), Expect(2) = 7e-07
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP 420
P YSP+SP+YSP+SP + +SP+YSP+SP
Sbjct: 1735 PTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1766
Score = 33.5 bits (75), Expect(2) = 7e-07
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1680 TSPSYSPTSPSYSPTSP 1696
[71][TOP]
>UniRef100_UPI00005A0B1D PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=2 Tax=Canis lupus familiaris
RepID=UPI00005A0B1D
Length = 1764
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1634 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1690
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1607 TSPNYSPTSPSYSPTSP 1623
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1655 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1711
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1662 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1718
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1614 TSPSYSPTSPSYSPTSP 1630
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1621 TSPSYSPTSPSYSPTSP 1637
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPS + YTP
Sbjct: 1676 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPN-YTP 1732
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1628 TSPSYSPTSPSYSPTSP 1644
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1669 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1725
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1690 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1746
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1635 TSPSYSPTSPSYSPTSP 1651
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1642 TSPSYSPTSPSYSPTSP 1658
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1585 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1641
Score = 60.5 bits (145), Expect(2) = 8e-12
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P YSP+SP YSPS P + SP YSP+SP +SP S Y+P P YSP+S
Sbjct: 1711 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTS 1762
Score = 33.5 bits (75), Expect(2) = 8e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1656 TSPSYSPTSPSYSPTSP 1672
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1565 SPSYSPTSPAYEPRSP 1580
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1599 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1655
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1587 SPSYSPTSPSYSPTSP 1602
Score = 54.3 bits (129), Expect(2) = 5e-10
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
P YSP+SP+YSP SP SP+YSPS P ++P S YSP+ P YSP+S + Y
Sbjct: 1697 PTSPSYSPTSPSYSPTSPSYSP----TSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPN-Y 1751
Query: 350 TPQT 339
TP +
Sbjct: 1752 TPMS 1755
Score = 33.5 bits (75), Expect(2) = 5e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1649 TSPSYSPTSPSYSPTSP 1665
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1602 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1661
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1662 PTSPS-YSP 1669
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1583 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1634
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1592 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1648
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1583 YTPQSPSYSPTSP 1595
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS+P Y+
Sbjct: 1672 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYT 1731
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1732 PTSPS-YSP 1739
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1630 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1689
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1690 PTSPS-YSP 1697
Score = 57.4 bits (137), Expect = 7e-07
Identities = 30/54 (55%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYN-SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP Y P SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1568 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPS-YSP 1620
Score = 43.5 bits (101), Expect(2) = 7e-07
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP 420
P YSP+SP+YSP+SP + +SP+YSP+SP
Sbjct: 1732 PTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1763
Score = 33.5 bits (75), Expect(2) = 7e-07
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1677 TSPSYSPTSPSYSPTSP 1693
[72][TOP]
>UniRef100_UPI00005A0B25 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 16 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B25
Length = 1752
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1554 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1610
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1527 TSPNYSPTSPSYSPTSP 1543
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1575 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1631
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1582 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1638
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1534 TSPSYSPTSPSYSPTSP 1550
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1541 TSPSYSPTSPSYSPTSP 1557
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPS + YTP
Sbjct: 1596 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPN-YTP 1652
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1548 TSPSYSPTSPSYSPTSP 1564
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1589 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1645
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1610 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1666
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1555 TSPSYSPTSPSYSPTSP 1571
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1562 TSPSYSPTSPSYSPTSP 1578
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST---GYSPSQPGYSPSSTS-QYT 348
P YSP+SP YSPS P + SP YSP+SP +SP++ YSPS P YSP+S + +Y+
Sbjct: 1631 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKYS 1690
Query: 347 P 345
P
Sbjct: 1691 P 1691
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1576 TSPSYSPTSPSYSPTSP 1592
Score = 60.1 bits (144), Expect(2) = 1e-11
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGY--SPSSTSQYTP 345
P YSP+SP+YSP+SP S P+Y+P+SP +SP S YSP+ P Y SPSS S
Sbjct: 1624 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPT 1683
Query: 344 QTNDK 330
N K
Sbjct: 1684 SPNPK 1688
Score = 33.5 bits (75), Expect(2) = 1e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1569 TSPSYSPTSPSYSPTSP 1585
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1519 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1575
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1507 SPSYSPTSPSYSPTSP 1522
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1522 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1581
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1582 PTSPS-YSP 1589
Score = 67.4 bits (163), Expect = 7e-10
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1505 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1561
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1503 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1554
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1512 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1568
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1503 YTPQSPSYSPTSP 1515
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS+P Y+
Sbjct: 1592 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYT 1651
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1652 PTSPS-YSP 1659
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1550 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1609
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1610 PTSPS-YSP 1617
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP--TYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P S PN YSP+SP TYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1678 PSYSPTSPNPK-YSPTSPNPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1733
Score = 55.5 bits (132), Expect = 3e-06
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 18/82 (21%)
Frame = -3
Query: 536 PDISIVFPNISI----YSPSSPTYSPSSPYNSGVSPDY--SPSSPQFSPSTG-------- 399
P S PN S Y+P+SP+YSP+SP S SP+Y SPSSP +SP++
Sbjct: 1634 PSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKYSPTS 1693
Query: 398 ----YSPSQPGYSPSSTSQYTP 345
YSP+ P YSP+S + Y+P
Sbjct: 1694 PNPTYSPTSPKYSPTSPT-YSP 1714
Score = 39.7 bits (91), Expect(2) = 9e-06
Identities = 21/39 (53%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = -3
Query: 515 PNISIYSPSSP---TYSPSSPYNSGVSPDYSPSSPQFSP 408
P YSP+SP TYSP+SP S SP YS +SP SP
Sbjct: 1707 PTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1745
Score = 33.5 bits (75), Expect(2) = 9e-06
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1653 TSPSYSPTSPSYSPTSP 1669
[73][TOP]
>UniRef100_UPI00005A0B22 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 13 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B22
Length = 1722
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1523 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1579
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1496 TSPNYSPTSPSYSPTSP 1512
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1544 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1600
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPSS +Y+P
Sbjct: 1565 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSS-PKYSP 1621
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1503 TSPSYSPTSPSYSPTSP 1519
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1510 TSPSYSPTSPSYSPTSP 1526
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/60 (55%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SPS+ YSP+ P YSP+S + Y+P T
Sbjct: 1579 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPKYSPTSPKYSPTSPT-YSPTT 1637
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSPSSP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1586 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1642
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1524 TSPSYSPTSPSYSPTSP 1540
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1531 TSPSYSPTSPSYSPTSP 1547
Score = 64.7 bits (156), Expect(2) = 4e-13
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1635 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1694
Score = 33.5 bits (75), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1580 TSPSYSPTSPSYSPTSP 1596
Score = 60.8 bits (146), Expect(2) = 6e-12
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP++P YSP+SP S SP Y+P+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1628 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPT-YSP 1684
Score = 33.5 bits (75), Expect(2) = 6e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1573 TSPSYSPTSPSYSPTSP 1589
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1474 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1530
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1454 SPSYSPTSPAYEPRSP 1469
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1488 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1544
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1476 SPSYSPTSPSYSPTSP 1491
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1491 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1550
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1551 PTSPS-YSP 1558
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1472 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1523
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1481 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1537
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1472 YTPQSPSYSPTSP 1484
Score = 62.8 bits (151), Expect = 2e-08
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN YSPSSP YSP+SP S SP YSP++P++SP S YSP+ P Y+P+S
Sbjct: 1603 PSYSPTSPN---YSPSSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS- 1658
Query: 359 SQYTP 345
+Y+P
Sbjct: 1659 PKYSP 1663
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1649 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTS 1703
Score = 49.3 bits (116), Expect(2) = 3e-08
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YS + P SP + +
Sbjct: 1663 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1720
Score = 32.3 bits (72), Expect(2) = 3e-08
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS + P YSPTSP
Sbjct: 1608 TSPNYSPSSPKYSPTSP 1624
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1519 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1578
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1579 PTSPS-YSP 1586
Score = 57.4 bits (137), Expect = 7e-07
Identities = 30/54 (55%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYN-SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP Y P SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1457 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPS-YSP 1509
Score = 57.0 bits (136), Expect = 9e-07
Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1547 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1606
Query: 371 PSSTSQYTPQT 339
P+S + Y+P +
Sbjct: 1607 PTSPN-YSPSS 1616
[74][TOP]
>UniRef100_UPI00005A0B1C PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 8 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1C
Length = 1719
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1589 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1645
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1562 TSPNYSPTSPSYSPTSP 1578
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1610 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1617 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1569 TSPSYSPTSPSYSPTSP 1585
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1576 TSPSYSPTSPSYSPTSP 1592
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPS + YTP
Sbjct: 1631 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPN-YTP 1687
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1583 TSPSYSPTSPSYSPTSP 1599
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1624 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1680
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1701
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1590 TSPSYSPTSPSYSPTSP 1606
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1597 TSPSYSPTSPSYSPTSP 1613
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1540 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1596
Score = 60.5 bits (145), Expect(2) = 8e-12
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P YSP+SP YSPS P + SP YSP+SP +SP S Y+P P YSP+S
Sbjct: 1666 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTS 1717
Score = 33.5 bits (75), Expect(2) = 8e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1611 TSPSYSPTSPSYSPTSP 1627
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1520 SPSYSPTSPAYEPRSP 1535
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1554 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1610
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1542 SPSYSPTSPSYSPTSP 1557
Score = 54.3 bits (129), Expect(2) = 5e-10
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
P YSP+SP+YSP SP SP+YSPS P ++P S YSP+ P YSP+S + Y
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSP----TSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPN-Y 1706
Query: 350 TPQT 339
TP +
Sbjct: 1707 TPMS 1710
Score = 33.5 bits (75), Expect(2) = 5e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1604 TSPSYSPTSPSYSPTSP 1620
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1557 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1616
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1617 PTSPS-YSP 1624
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1538 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1589
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1547 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1603
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1538 YTPQSPSYSPTSP 1550
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS+P Y+
Sbjct: 1627 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYT 1686
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1687 PTSPS-YSP 1694
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1585 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1644
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1645 PTSPS-YSP 1652
Score = 43.5 bits (101), Expect(2) = 7e-07
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP 420
P YSP+SP+YSP+SP + +SP+YSP+SP
Sbjct: 1687 PTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1718
Score = 33.5 bits (75), Expect(2) = 7e-07
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1632 TSPSYSPTSPSYSPTSP 1648
[75][TOP]
>UniRef100_UPI00005A0B19 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 5 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B19
Length = 1693
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1563 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1619
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1536 TSPNYSPTSPSYSPTSP 1552
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1584 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1640
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1591 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1647
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1543 TSPSYSPTSPSYSPTSP 1559
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1550 TSPSYSPTSPSYSPTSP 1566
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPS + YTP
Sbjct: 1605 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPN-YTP 1661
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1557 TSPSYSPTSPSYSPTSP 1573
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1598 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1654
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1619 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1675
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1564 TSPSYSPTSPSYSPTSP 1580
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1571 TSPSYSPTSPSYSPTSP 1587
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1514 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1570
Score = 60.5 bits (145), Expect(2) = 8e-12
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P YSP+SP YSPS P + SP YSP+SP +SP S Y+P P YSP+S
Sbjct: 1640 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTS 1691
Score = 33.5 bits (75), Expect(2) = 8e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1585 TSPSYSPTSPSYSPTSP 1601
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1494 SPSYSPTSPAYEPRSP 1509
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1528 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1584
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1516 SPSYSPTSPSYSPTSP 1531
Score = 54.3 bits (129), Expect(2) = 5e-10
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
P YSP+SP+YSP SP SP+YSPS P ++P S YSP+ P YSP+S + Y
Sbjct: 1626 PTSPSYSPTSPSYSPTSPSYSP----TSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPN-Y 1680
Query: 350 TPQT 339
TP +
Sbjct: 1681 TPMS 1684
Score = 33.5 bits (75), Expect(2) = 5e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1578 TSPSYSPTSPSYSPTSP 1594
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1531 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1590
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1591 PTSPS-YSP 1598
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1512 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1563
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1521 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1577
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1512 YTPQSPSYSPTSP 1524
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS+P Y+
Sbjct: 1601 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYT 1660
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1661 PTSPS-YSP 1668
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1559 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1618
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1619 PTSPS-YSP 1626
Score = 43.5 bits (101), Expect(2) = 7e-07
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP 420
P YSP+SP+YSP+SP + +SP+YSP+SP
Sbjct: 1661 PTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1692
Score = 33.5 bits (75), Expect(2) = 7e-07
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1606 TSPSYSPTSPSYSPTSP 1622
[76][TOP]
>UniRef100_UPI00005A0B26 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 17 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B26
Length = 1684
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1554 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1610
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1527 TSPNYSPTSPSYSPTSP 1543
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1575 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1631
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1582 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1638
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1534 TSPSYSPTSPSYSPTSP 1550
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1541 TSPSYSPTSPSYSPTSP 1557
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPS + YTP
Sbjct: 1596 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPN-YTP 1652
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1548 TSPSYSPTSPSYSPTSP 1564
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1589 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1645
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1610 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1666
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1555 TSPSYSPTSPSYSPTSP 1571
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1562 TSPSYSPTSPSYSPTSP 1578
Score = 60.5 bits (145), Expect(2) = 8e-12
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P YSP+SP YSPS P + SP YSP+SP +SP S Y+P P YSP+S
Sbjct: 1631 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTS 1682
Score = 33.5 bits (75), Expect(2) = 8e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1576 TSPSYSPTSPSYSPTSP 1592
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1519 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1575
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1507 SPSYSPTSPSYSPTSP 1522
Score = 54.3 bits (129), Expect(2) = 5e-10
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
P YSP+SP+YSP SP SP+YSPS P ++P S YSP+ P YSP+S + Y
Sbjct: 1617 PTSPSYSPTSPSYSPTSPSYSP----TSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPN-Y 1671
Query: 350 TPQT 339
TP +
Sbjct: 1672 TPMS 1675
Score = 33.5 bits (75), Expect(2) = 5e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1569 TSPSYSPTSPSYSPTSP 1585
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1522 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1581
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1582 PTSPS-YSP 1589
Score = 67.4 bits (163), Expect = 7e-10
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1505 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1561
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1503 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1554
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1512 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1568
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1503 YTPQSPSYSPTSP 1515
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS+P Y+
Sbjct: 1592 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYT 1651
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1652 PTSPS-YSP 1659
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1550 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1609
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1610 PTSPS-YSP 1617
Score = 43.5 bits (101), Expect(2) = 7e-07
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP 420
P YSP+SP+YSP+SP + +SP+YSP+SP
Sbjct: 1652 PTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1683
Score = 33.5 bits (75), Expect(2) = 7e-07
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1597 TSPSYSPTSPSYSPTSP 1613
[77][TOP]
>UniRef100_UPI00005A0B23 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 14 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B23
Length = 1653
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1523 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1579
Score = 35.4 bits (80), Expect(2) = 2e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PSYSPTSP
Sbjct: 1496 TSPNYSPTSPSYSPTSP 1512
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1544 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1600
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1551 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1607
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1503 TSPSYSPTSPSYSPTSP 1519
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1510 TSPSYSPTSPSYSPTSP 1526
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSPS + YTP
Sbjct: 1565 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPN-YTP 1621
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1517 TSPSYSPTSPSYSPTSP 1533
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1558 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1614
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1579 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1635
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1524 TSPSYSPTSPSYSPTSP 1540
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1531 TSPSYSPTSPSYSPTSP 1547
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1474 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1530
Score = 60.5 bits (145), Expect(2) = 8e-12
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P YSP+SP YSPS P + SP YSP+SP +SP S Y+P P YSP+S
Sbjct: 1600 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTS 1651
Score = 33.5 bits (75), Expect(2) = 8e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1545 TSPSYSPTSPSYSPTSP 1561
Score = 26.6 bits (57), Expect(2) = 8e-12
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y P SP
Sbjct: 1454 SPSYSPTSPAYEPRSP 1469
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1488 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1544
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 1476 SPSYSPTSPSYSPTSP 1491
Score = 54.3 bits (129), Expect(2) = 5e-10
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
P YSP+SP+YSP SP SP+YSPS P ++P S YSP+ P YSP+S + Y
Sbjct: 1586 PTSPSYSPTSPSYSPTSPSYSP----TSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPN-Y 1640
Query: 350 TPQT 339
TP +
Sbjct: 1641 TPMS 1644
Score = 33.5 bits (75), Expect(2) = 5e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1538 TSPSYSPTSPSYSPTSP 1554
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1491 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1550
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1551 PTSPS-YSP 1558
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1472 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1523
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1481 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1537
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
Y+ PSYSPTSP
Sbjct: 1472 YTPQSPSYSPTSP 1484
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSPS+P Y+
Sbjct: 1561 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYT 1620
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1621 PTSPS-YSP 1628
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1519 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1578
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1579 PTSPS-YSP 1586
Score = 57.4 bits (137), Expect = 7e-07
Identities = 30/54 (55%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYN-SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP Y P SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1457 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPS-YSP 1509
Score = 43.5 bits (101), Expect(2) = 7e-07
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP 420
P YSP+SP+YSP+SP + +SP+YSP+SP
Sbjct: 1621 PTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1652
Score = 33.5 bits (75), Expect(2) = 7e-07
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1566 TSPSYSPTSPSYSPTSP 1582
[78][TOP]
>UniRef100_UPI000186D846 predicted protein n=1 Tax=Pediculus humanus corporis
RepID=UPI000186D846
Length = 1885
Score = 68.6 bits (166), Expect(2) = 3e-14
Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + VSP Y+P+SPQ+SP S YSP+ P YSPSS S +TP
Sbjct: 1749 PGSPKYSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTSPTYSPTSPSYSPSSPS-HTP 1805
Score = 33.5 bits (75), Expect(2) = 3e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1695 TSPSYSRTSPSYSPTSP 1711
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1624 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1680
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1611 TSPSYSPTSPSYSPTSP 1627
Score = 69.3 bits (168), Expect(2) = 1e-13
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
PN YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1603 PNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 30.8 bits (68), Expect(2) = 1e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TS NYS T PSYSP+SP
Sbjct: 1583 TSSNYSPTSPSYSPSSP 1599
Score = 66.2 bits (160), Expect(2) = 2e-13
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYT 348
P YSP+SP+YSP+SP S SP YSP+SP +SPS+ Y+P+ P +SP+S S Y+
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPSSPNYTPASPSFSPTSPSLYS 1736
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1625 TSPSYSPTSPSYSPTSP 1641
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 31/54 (57%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 357
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1698
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1618 TSPSYSPTSPSYSPTSP 1634
Score = 65.5 bits (158), Expect(2) = 3e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS-PSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +S S YSP+ P YSPSS + YTP
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPSSPN-YTP 1722
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1632 TSPSYSPTSPSYSPTSP 1648
Score = 63.9 bits (154), Expect(2) = 3e-12
Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 8/63 (12%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--STGYSPSQPGYSPSSTS------QYTP 345
Y+P+SP YSP+SP S SP YSPSSP +P ST YSP+ P YSP+S S QY+P
Sbjct: 1775 YTPTSPQYSPTSPTYSPTSPSYSPSSPSHTPGASTRYSPTSPKYSPTSLSYSPASPQYSP 1834
Query: 344 QTN 336
++
Sbjct: 1835 SSS 1837
Score = 31.2 bits (69), Expect(2) = 3e-12
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T PSYSPTSP
Sbjct: 1751 SPKYSPTSPSYSPTSP 1766
Score = 60.5 bits (145), Expect(2) = 8e-12
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSPSSP + SP +SP+SP S YSP+ P YSP S +Y+P
Sbjct: 1706 YSPTSPSYSPSSPNYTPASPSFSPTSPSLYSSPRYSPASPSYSPGS-PKYSP 1756
Score = 60.5 bits (145), Expect(2) = 8e-12
Identities = 35/70 (50%), Positives = 41/70 (58%), Gaps = 13/70 (18%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPD------YSPSSPQFSP-STGYSPSQPGYSPSSTS 357
P YSPSSP Y+P+SP S SP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1708 PTSPSYSPSSPNYTPASPSFSPTSPSLYSSPRYSPASPSYSPGSPKYSPTSPSYSPTSPS 1767
Query: 356 ------QYTP 345
QYTP
Sbjct: 1768 YASVSPQYTP 1777
Score = 33.5 bits (75), Expect(2) = 8e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1653 TSPSYSPTSPSYSPTSP 1669
Score = 33.5 bits (75), Expect(2) = 8e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1660 TSPSYSPTSPSYSPTSP 1676
Score = 62.0 bits (149), Expect(2) = 1e-10
Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 9/66 (13%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSP--------YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P YSP+SPTYSP+SP + G S YSP+SP++SP S YSP+ P YSPSS
Sbjct: 1777 PTSPQYSPTSPTYSPTSPSYSPSSPSHTPGASTRYSPTSPKYSPTSLSYSPASPQYSPSS 1836
Query: 362 TSQYTP 345
S+Y+P
Sbjct: 1837 -SKYSP 1841
Score = 57.8 bits (138), Expect(2) = 1e-10
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--TGYSPSQPGYSPSS 363
YSPSS YSP+SP + SPDYS SSP +SP+ YSP+ P YSP+S
Sbjct: 1832 YSPSSSKYSPTSPTYTPTSPDYSASSPTYSPTGPPSYSPTSPTYSPTS 1879
Score = 32.0 bits (71), Expect(2) = 1e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1778 TSPQYSPTSPTYSPTSP 1794
Score = 27.7 bits (60), Expect(2) = 1e-10
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+Y+ P Y+PTSP
Sbjct: 1764 TSPSYASVSPQYTPTSP 1780
Score = 57.4 bits (137), Expect(2) = 2e-10
Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPS-QPGYSPSSTSQYTPQ 342
P YSP+SP YSPSS S SP Y+P+SP +S S+ YSP+ P YSP+S + Y+P
Sbjct: 1820 PTSLSYSPASPQYSPSSSKYSPTSPTYTPTSPDYSASSPTYSPTGPPSYSPTSPT-YSPT 1878
Query: 341 TNDKDER 321
+ + D+R
Sbjct: 1879 SPEYDDR 1885
Score = 31.6 bits (70), Expect(2) = 2e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSP+SP
Sbjct: 1785 TSPTYSPTSPSYSPSSP 1801
Score = 68.6 bits (166), Expect = 3e-10
Identities = 36/65 (55%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S P YSPSSP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1582 PTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1641
Query: 359 SQYTP 345
S Y+P
Sbjct: 1642 S-YSP 1645
Score = 56.6 bits (135), Expect(2) = 3e-09
Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 9/70 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYN--------SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P YSP+SP+YSPSSP + S SP YSP+S +SP S YSPS YSP+S
Sbjct: 1784 PTSPTYSPTSPSYSPSSPSHTPGASTRYSPTSPKYSPTSLSYSPASPQYSPSSSKYSPTS 1843
Query: 362 TSQYTPQTND 333
+ YTP + D
Sbjct: 1844 PT-YTPTSPD 1852
Score = 28.5 bits (62), Expect(2) = 3e-09
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP Y+ T P YSPTSP
Sbjct: 1772 SPQYTPTSPQYSPTSP 1787
Score = 55.5 bits (132), Expect(2) = 1e-08
Identities = 29/60 (48%), Positives = 35/60 (58%), Gaps = 8/60 (13%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTP 345
YSP+SP YSP+S S SP YSPSS ++SP S YS S P YSP+ Y+P
Sbjct: 1811 YSPTSPKYSPTSLSYSPASPQYSPSSSKYSPTSPTYTPTSPDYSASSPTYSPTGPPSYSP 1870
Score = 27.3 bits (59), Expect(2) = 1e-08
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSY+ SP
Sbjct: 1757 TSPSYSPTSPSYASVSP 1773
Score = 61.2 bits (147), Expect = 5e-08
Identities = 29/53 (54%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
YSPSSP ++P+SP + S +YSP+SP +SPS+ YSP+ P YSP+S S Y+P
Sbjct: 1566 YSPSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPS-YSP 1617
Score = 58.9 bits (141), Expect = 2e-07
Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ ++P+SP+ +P+S S SP YSPSSP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1568 PSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPS-YSP 1624
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1606 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1665
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1666 PTSPS-YSP 1673
Score = 54.3 bits (129), Expect = 6e-06
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1641 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1700
Query: 371 PSSTSQYTP 345
+S S Y+P
Sbjct: 1701 RTSPS-YSP 1708
Score = 54.3 bits (129), Expect = 6e-06
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 11/75 (14%)
Frame = -3
Query: 536 PDISIVFPNISIYSPS---SPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSP 390
P+ + P+ S SPS SP YSP+SP S SP YSP+SP +SP S Y+P
Sbjct: 1718 PNYTPASPSFSPTSPSLYSSPRYSPASPSYSPGSPKYSPTSPSYSPTSPSYASVSPQYTP 1777
Query: 389 SQPGYSPSSTSQYTP 345
+ P YSP+S + Y+P
Sbjct: 1778 TSPQYSPTSPT-YSP 1791
[79][TOP]
>UniRef100_B3RM26 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3RM26_TRIAD
Length = 1784
Score = 68.6 bits (166), Expect(2) = 3e-14
Identities = 34/62 (54%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S S Y+P +
Sbjct: 1720 PTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPS-YSPTS 1778
Query: 338 ND 333
D
Sbjct: 1779 PD 1780
Score = 33.5 bits (75), Expect(2) = 3e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1686 TSPSYSPTSPSYSPTSP 1702
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S S Y+P
Sbjct: 1692 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPS-YSP 1748
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1637 TSPSYSPTSPSYSPTSP 1653
Score = 66.2 bits (160), Expect(2) = 2e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1657 PTSPSYSPTSPSYSPTSPKYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1713
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1678 PTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPS-YSP 1734
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1658 TSPSYSPTSPSYSPTSP 1674
Score = 33.1 bits (74), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1602 TSPRYSPTSPSYSPTSP 1618
Score = 65.5 bits (158), Expect(2) = 3e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1636 PTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPKYSPTSPRYSPTSPS-YSP 1692
Score = 33.1 bits (74), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1616 TSPRYSPTSPSYSPTSP 1632
Score = 65.1 bits (157), Expect(2) = 4e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S +Y+P
Sbjct: 1685 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTS-PRYSP 1741
Score = 64.7 bits (156), Expect(2) = 4e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1713 PTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPS-YSP 1769
Score = 33.5 bits (75), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1693 TSPSYSPTSPSYSPTSP 1709
Score = 33.1 bits (74), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1630 TSPRYSPTSPSYSPTSP 1646
Score = 65.9 bits (159), Expect(2) = 7e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 PTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPS-YSP 1671
Score = 31.6 bits (70), Expect(2) = 7e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P YSPTSP
Sbjct: 1595 TSPSYSPTSPRYSPTSP 1611
Score = 62.4 bits (150), Expect(2) = 2e-12
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS 366
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1734 PTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPDYSPN 1784
Score = 33.5 bits (75), Expect(2) = 2e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1700 TSPSYSPTSPSYSPTSP 1716
Score = 57.0 bits (136), Expect(2) = 1e-10
Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S +Y+P
Sbjct: 1671 PTSPKYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTS-PRYSP 1727
Score = 33.1 bits (74), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1651 TSPRYSPTSPSYSPTSP 1667
Score = 69.3 bits (168), Expect = 2e-10
Identities = 38/69 (55%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = -3
Query: 548 SKL*PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
SKL D S P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1583 SKLLTDFSKYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYS 1642
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1643 PTSPS-YSP 1650
Score = 54.7 bits (130), Expect(2) = 1e-09
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSST 360
P YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 1643 PTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPKYSPTSPRYSPTSPSYSPTSPSYSPTSP 1702
Query: 359 SQYTP 345
S Y+P
Sbjct: 1703 S-YSP 1706
Score = 31.6 bits (70), Expect(2) = 1e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P YSPTSP
Sbjct: 1609 TSPSYSPTSPRYSPTSP 1625
Score = 55.1 bits (131), Expect = 3e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1688 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYS 1747
Query: 371 PSSTSQYTP 345
P+S +Y+P
Sbjct: 1748 PTS-PRYSP 1755
Score = 53.5 bits (127), Expect = 1e-05
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
P YSP+SP YSP SP SP YSP+SP++SP S YSP+ P YSP+S +Y
Sbjct: 1622 PTSPSYSPTSPRYSPTSPSYSP----TSPSYSPTSPRYSPTSPSYSPTSPSYSPTS-PKY 1676
Query: 350 TP 345
+P
Sbjct: 1677 SP 1678
[80][TOP]
>UniRef100_A3GID7 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3GID7_PICST
Length = 1739
Score = 68.6 bits (166), Expect(2) = 3e-14
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1657 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTS-PQYSP 1713
Score = 33.5 bits (75), Expect(2) = 3e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1602 TSPSYSPTSPSYSPTSP 1618
Score = 67.8 bits (164), Expect(2) = 5e-14
Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP S S +P
Sbjct: 1671 PTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPGSPEYSPNSP 1730
Query: 344 QTNDK 330
+T DK
Sbjct: 1731 KTEDK 1735
Score = 33.5 bits (75), Expect(2) = 5e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1616 TSPSYSPTSPSYSPTSP 1632
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1573 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1629
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1636 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS-PQYSP 1692
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1546 TSPSYSPTSPSYSPTSP 1562
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1581 TSPSYSPTSPSYSPTSP 1597
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1594 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1650
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1671
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1553 TSPSYSPTSPSYSPTSP 1569
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1560 TSPSYSPTSPSYSPTSP 1576
Score = 67.0 bits (162), Expect(2) = 1e-12
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1559 PTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1615
Score = 29.6 bits (65), Expect(2) = 1e-12
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP Y T PSYSPTSP
Sbjct: 1540 SPGYGGTSPSYSPTSP 1555
Score = 66.2 bits (160), Expect = 1e-09
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1552 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1608
Score = 65.9 bits (159), Expect = 2e-09
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1550 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPS-YSP 1601
Score = 61.2 bits (147), Expect = 5e-08
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y +SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1543 YGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPS-YSP 1594
Score = 58.9 bits (141), Expect = 2e-07
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1566 PTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1622
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1590 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1649
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1650 PTSPS-YSP 1657
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1618 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1677
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1678 PTSPS-YSP 1685
Score = 57.0 bits (136), Expect = 9e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1576 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1635
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1636 PTSPS-YSP 1643
Score = 56.6 bits (135), Expect = 1e-06
Identities = 34/69 (49%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1569 PSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1628
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1629 PTSPS-YSP 1636
[81][TOP]
>UniRef100_Q6FQS9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FQS9_CANGA
Length = 1715
Score = 68.6 bits (166), Expect(2) = 3e-14
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP S + Y+P+
Sbjct: 1650 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGSPT-YSPK- 1707
Query: 338 NDKDER 321
D+DE+
Sbjct: 1708 -DEDEK 1712
Score = 33.5 bits (75), Expect(2) = 3e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1595 TSPSYSPTSPSYSPTSP 1611
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1566 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1622
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1587 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1643
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1608 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1664
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1629 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1685
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1553 TSPSYSPTSPSYSPTSP 1569
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1560 TSPSYSPTSPSYSPTSP 1576
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1567 TSPSYSPTSPSYSPTSP 1583
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1574 TSPSYSPTSPSYSPTSP 1590
Score = 67.4 bits (163), Expect = 7e-10
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1545 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1601
Score = 64.3 bits (155), Expect = 6e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+SP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1543 FSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1594
Score = 57.8 bits (138), Expect = 5e-07
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = -3
Query: 491 SSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
SSP +SP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1539 SSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1587
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1562 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1621
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1622 PTSPS-YSP 1629
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1590 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1649
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1650 PTSPS-YSP 1657
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1625 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1684
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1685 PTSPS-YSP 1692
Score = 57.0 bits (136), Expect = 9e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1548 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1607
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1608 PTSPS-YSP 1615
Score = 56.6 bits (135), Expect = 1e-06
Identities = 34/69 (49%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1541 PGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1600
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1601 PTSPS-YSP 1608
[82][TOP]
>UniRef100_B0XAQ9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
RepID=B0XAQ9_CULQU
Length = 1874
Score = 69.7 bits (169), Expect(2) = 4e-14
Identities = 35/57 (61%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Frame = -3
Query: 506 SIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
S YSP+SP+YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1652 SPYSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPN-YTPAT 1707
Score = 32.0 bits (71), Expect(2) = 4e-14
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1596 TSPRYSPTSPNYSPTSP 1612
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 34/58 (58%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSPSSP+ S SP YSPSSP++SP S YSP+ P Y S QYTP
Sbjct: 1705 PATPSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSPSYGGS--PQYTP 1760
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1685 TSPSYSPTSPSYSPTSP 1701
Score = 66.2 bits (160), Expect(2) = 3e-13
Identities = 32/60 (53%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P+ YSP+SP+YSP+SP S SP+Y+P++P +SP S YSPS P YSP+S S Y+P +
Sbjct: 1677 PSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPSSPHYSPTSPS-YSPSS 1735
Score = 32.3 bits (72), Expect(2) = 3e-13
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P+YSPTSP
Sbjct: 1657 TSPSYSPTSPAYSPTSP 1673
Score = 66.2 bits (160), Expect(2) = 4e-13
Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSPSSP S SP YSP+SP +SP S Y+P+ P YSP+S + Y+P +
Sbjct: 1663 PTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPN-YSPSS 1721
Score = 32.0 bits (71), Expect(2) = 4e-13
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
+SP YS T PSYSPTSP+
Sbjct: 1637 SSPAYSPTSPSYSPTSPY 1654
Score = 64.7 bits (156), Expect(2) = 1e-12
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + +P YSP+SP +SPS+ YSP+ P YSPSS +Y+P
Sbjct: 1684 PTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPSSPHYSPTSPSYSPSS-PKYSP 1740
Score = 32.0 bits (71), Expect(2) = 1e-12
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + PSYSPTSP
Sbjct: 1671 TSPSYSPSSPSYSPTSP 1687
Score = 62.8 bits (151), Expect(2) = 2e-12
Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = -3
Query: 527 SIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
S ++ + Y+PSSP YSP+SP S SP YSP+SP +SP S YSP+ P YSPSS S Y
Sbjct: 1625 SPLYSPTATYAPSSPAYSPTSPSYSPTSP-YSPTSPSYSPTSPAYSPTSPSYSPSSPS-Y 1682
Query: 350 TP 345
+P
Sbjct: 1683 SP 1684
Score = 33.5 bits (75), Expect(2) = 2e-12
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T P YSPTSP
Sbjct: 1589 TSPNYSPTSPRYSPTSP 1605
Score = 62.4 bits (150), Expect(2) = 4e-12
Identities = 35/64 (54%), Positives = 42/64 (65%), Gaps = 7/64 (10%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNS------GVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 357
P YSPSSP YSP+SP S G SP Y+P+SPQ+SP S YSP+ P YSPSS
Sbjct: 1726 PTSPSYSPSSPKYSPTSPSYSPTSPSYGGSPQYTPASPQYSPTSPKYSPTSPSYSPSS-P 1784
Query: 356 QYTP 345
Q++P
Sbjct: 1785 QHSP 1788
Score = 32.3 bits (72), Expect(2) = 4e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ PSYSPTSP
Sbjct: 1699 TSPNYTPATPSYSPTSP 1715
Score = 63.5 bits (153), Expect(2) = 4e-11
Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P Y+P +T Y+P
Sbjct: 1656 PTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTP-ATPSYSP 1712
Score = 28.1 bits (61), Expect(2) = 4e-11
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
TSP+YS T P YSPT+ +
Sbjct: 1617 TSPSYSPTSPLYSPTATY 1634
Score = 69.7 bits (169), Expect = 1e-10
Identities = 37/73 (50%), Positives = 45/73 (61%), Gaps = 9/73 (12%)
Frame = -3
Query: 536 PDISIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSP 369
P S PN S YSP+SP YSP+SP S SP YSP+SP +SP+ Y+PS P YSP
Sbjct: 1584 PSYSPTSPNYSPTSPRYSPTSPNYSPTSPNYSPTSPSYSPTSPLYSPTATYAPSSPAYSP 1643
Query: 368 SS-----TSQYTP 345
+S TS Y+P
Sbjct: 1644 TSPSYSPTSPYSP 1656
Score = 56.6 bits (135), Expect(2) = 3e-10
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP---STGYSPSQPGYSPSSTSQYTP 345
Y+P+SP YSP+SP S SP YSPSSPQ SP + + + P YSP +T++Y+P
Sbjct: 1758 YTPASPQYSPTSPKYSPTSPSYSPSSPQHSPGSSGSNFMVNSPTYSP-TTARYSP 1811
Score = 32.0 bits (71), Expect(2) = 3e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS + P YSPTSP
Sbjct: 1713 TSPNYSPSSPHYSPTSP 1729
Score = 56.2 bits (134), Expect(2) = 5e-10
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQ--YTP 345
P + YSP+ +YSP S S SP Y+P+SP +SPS+ YSP+ GYSPSS + Y+P
Sbjct: 1804 PTTARYSPNMSSYSPGSQKYSPTSPVYTPTSPHYSPSSPAYSPTGQGYSPSSPASPTYSP 1863
Query: 344 QTNDKDERGKD 312
+ ++ D
Sbjct: 1864 TSPSYEDSVDD 1874
Score = 31.6 bits (70), Expect(2) = 5e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSP+SP
Sbjct: 1768 TSPKYSPTSPSYSPSSP 1784
Score = 64.7 bits (156), Expect(2) = 6e-10
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 6/60 (10%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS-----TSQYTPQT 339
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S T+ Y P +
Sbjct: 1579 YSPTSPSYSPTSPNYSPTSPRYSPTSPNYSPTSPNYSPTSPSYSPTSPLYSPTATYAPSS 1638
Score = 22.7 bits (47), Expect(2) = 6e-10
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS + P+Y+ SP
Sbjct: 1557 SPSYSPSSPNYAAASP 1572
Score = 64.3 bits (155), Expect = 6e-09
Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Frame = -3
Query: 536 PDISIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSP 369
P S PN S YSP+SP+YSPSSP S SP YSP+SP + S Y+P+ P YSP
Sbjct: 1708 PSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSPSYGGSPQYTPASPQYSP 1767
Query: 368 SSTSQYTP 345
+S +Y+P
Sbjct: 1768 TS-PKYSP 1774
Score = 53.5 bits (127), Expect(2) = 7e-09
Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP+Y SP + SP YSP+SP++SP S YSPS P +SP S+
Sbjct: 1740 PTSPSYSPTSPSYG-GSPQYTPASPQYSPTSPKYSPTSPSYSPSSPQHSPGSS 1791
Score = 30.4 bits (67), Expect(2) = 7e-09
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T PSYSP+SP
Sbjct: 1720 SSPHYSPTSPSYSPSSP 1736
Score = 63.2 bits (152), Expect = 1e-08
Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Frame = -3
Query: 536 PDISIVFPNISIYSP--SSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS 366
P S PN + SP +SP YSP+SP S SP+YSP+SP++SP S YSP+ P YSP+
Sbjct: 1558 PSYSPSSPNYAAASPGGASPGYSPTSPSYSPTSPNYSPTSPRYSPTSPNYSPTSPNYSPT 1617
Query: 365 STSQYTP 345
S S Y+P
Sbjct: 1618 SPS-YSP 1623
Score = 60.8 bits (146), Expect = 6e-08
Identities = 36/76 (47%), Positives = 44/76 (57%), Gaps = 10/76 (13%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSP------TYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPS 387
P+ S PN S YSP+SP TY+PSSP S SP YSP+SP S YSP+
Sbjct: 1605 PNYSPTSPNYSPTSPSYSPTSPLYSPTATYAPSSPAYSPTSPSYSPTSPYSPTSPSYSPT 1664
Query: 386 QPGYSPSSTSQYTPQT 339
P YSP+S S Y+P +
Sbjct: 1665 SPAYSPTSPS-YSPSS 1679
Score = 58.2 bits (139), Expect = 4e-07
Identities = 29/60 (48%), Positives = 39/60 (65%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 357
P++S P YSP+SP Y+P+SP+ S SP YSP+ +SPS SP+ P YSP+S S
Sbjct: 1811 PNMSSYSPGSQKYSPTSPVYTPTSPHYSPSSPAYSPTGQGYSPS---SPASPTYSPTSPS 1867
Score = 48.1 bits (113), Expect(2) = 4e-07
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = -3
Query: 512 NISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
N YSP++ YSP+ S S YSP+SP ++P S YSPS P YSP+ Y+P +
Sbjct: 1798 NSPTYSPTTARYSPNMSSYSPGSQKYSPTSPVYTPTSPHYSPSSPAYSPTGQG-YSPSS 1855
Score = 29.6 bits (65), Expect(2) = 4e-07
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSPTSP
Sbjct: 1762 SPQYSPTSPKYSPTSP 1777
Score = 45.8 bits (107), Expect(2) = 5e-07
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 24/81 (29%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSP-----------------------DYSPSSPQFSP- 408
P YSP+SP+YSPSSP +S S YSP S ++SP
Sbjct: 1767 PTSPKYSPTSPSYSPSSPQHSPGSSGSNFMVNSPTYSPTTARYSPNMSSYSPGSQKYSPT 1826
Query: 407 STGYSPSQPGYSPSSTSQYTP 345
S Y+P+ P YSPSS + Y+P
Sbjct: 1827 SPVYTPTSPHYSPSSPA-YSP 1846
Score = 31.6 bits (70), Expect(2) = 5e-07
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T PSYSPTSP
Sbjct: 1734 SSPKYSPTSPSYSPTSP 1750
Score = 56.2 bits (134), Expect = 2e-06
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYS 372
P S P S SPS +YSP+SP S SP YSP+SP ++P+T YSP+ P YS
Sbjct: 1659 PSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYS 1718
Query: 371 PSSTSQYTP 345
PSS Y+P
Sbjct: 1719 PSS-PHYSP 1726
[83][TOP]
>UniRef100_UPI00003BD271 hypothetical protein DEHA0A14036g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BD271
Length = 1749
Score = 68.2 bits (165), Expect(2) = 4e-14
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S S Y+P
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPS-YSP 1707
Score = 33.5 bits (75), Expect(2) = 4e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1596 TSPSYSPTSPSYSPTSP 1612
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP S Y+P++
Sbjct: 1679 PTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPGS-PLYSPES 1737
Query: 338 NDKDERGK 315
K + K
Sbjct: 1738 ESKSKDEK 1745
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1624 TSPSYSPTSPSYSPTSP 1640
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1581 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1637
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1602 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1658
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1623 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1679
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1561 TSPSYSPTSPSYSPTSP 1577
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1568 TSPSYSPTSPSYSPTSP 1584
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1575 TSPSYSPTSPSYSPTSP 1591
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 10/75 (13%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP-- 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1672 PTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTS-PQYSPGS 1730
Query: 344 -------QTNDKDER 321
++ KDE+
Sbjct: 1731 PLYSPESESKSKDEK 1745
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 33/62 (53%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SPQ+SP S YSP P YSP S S+ +
Sbjct: 1686 PTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPGSPLYSPESESKSKDEK 1745
Query: 338 ND 333
D
Sbjct: 1746 KD 1747
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1617 TSPSYSPTSPSYSPTSP 1633
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1631 TSPSYSPTSPSYSPTSP 1647
Score = 65.5 bits (158), Expect(2) = 3e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1644 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPS-YSP 1700
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1589 TSPSYSPTSPSYSPTSP 1605
Score = 67.0 bits (162), Expect(2) = 7e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1560 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1616
Score = 30.4 bits (67), Expect(2) = 7e-13
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y T P+YSPTSP
Sbjct: 1547 TSPGYGGTSPTYSPTSP 1563
Score = 59.3 bits (142), Expect(2) = 2e-11
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S QY+P
Sbjct: 1665 PTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPS--YSPTSPQYSPTS-PQYSP 1721
Score = 33.5 bits (75), Expect(2) = 2e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1610 TSPSYSPTSPSYSPTSP 1626
Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1558 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1609
Score = 62.8 bits (151), Expect = 2e-08
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y +SPTYSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1551 YGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1602
Score = 60.1 bits (144), Expect = 1e-07
Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SPQ+SP S YSP+ P YS
Sbjct: 1647 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYS 1706
Query: 371 PSSTSQYTP 345
P+S QY+P
Sbjct: 1707 PTS-PQYSP 1714
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1619 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1678
Query: 371 PSSTSQYTP 345
P+S QY+P
Sbjct: 1679 PTS-PQYSP 1686
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1563 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1622
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1623 PTSPS-YSP 1630
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1598 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1657
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1658 PTSPS-YSP 1665
Score = 57.4 bits (137), Expect = 7e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1556 PTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1615
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1616 PTSPS-YSP 1623
[84][TOP]
>UniRef100_A5E6J4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5E6J4_LODEL
Length = 1745
Score = 68.2 bits (165), Expect(2) = 4e-14
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S S Y+P
Sbjct: 1654 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPS-YSP 1710
Score = 33.5 bits (75), Expect(2) = 4e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1599 TSPSYSPTSPSYSPTSP 1615
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1563 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1619
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1584 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1640
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1605 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1661
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1626 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1682
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1543 TSPSYSPTSPSYSPTSP 1559
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1550 TSPSYSPTSPSYSPTSP 1566
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1557 TSPSYSPTSPSYSPTSP 1573
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1571 TSPSYSPTSPSYSPTSP 1587
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP P YSP S +Y P++
Sbjct: 1682 PTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPRSPNYSPKS-PEYKPKS 1740
Query: 338 NDKDE 324
K +
Sbjct: 1741 PSKKD 1745
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1627 TSPSYSPTSPSYSPTSP 1643
Score = 65.5 bits (158), Expect(2) = 3e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1647 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPS-YSP 1703
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1592 TSPSYSPTSPSYSPTSP 1608
Score = 64.3 bits (155), Expect(2) = 6e-13
Identities = 35/71 (49%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP S S +P
Sbjct: 1675 PTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPRSPNYSPKSP 1734
Query: 344 QTNDKDERGKD 312
+ K KD
Sbjct: 1735 EYKPKSPSKKD 1745
Score = 33.5 bits (75), Expect(2) = 6e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1620 TSPSYSPTSPSYSPTSP 1636
Score = 60.1 bits (144), Expect(2) = 1e-11
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S QY+P
Sbjct: 1668 PTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPS--YSPTSPQYSPTS-PQYSP 1724
Query: 344 QT 339
++
Sbjct: 1725 RS 1726
Score = 33.5 bits (75), Expect(2) = 1e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1613 TSPSYSPTSPSYSPTSP 1629
Score = 67.0 bits (162), Expect(2) = 6e-11
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1542 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1598
Score = 23.9 bits (50), Expect(2) = 6e-11
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
T+P Y T P Y TSP
Sbjct: 1520 TTPGYGGTSPGYGGTSP 1536
Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1540 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1591
Score = 60.1 bits (144), Expect = 1e-07
Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SPQ+SP S YSP+ P YS
Sbjct: 1650 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYS 1709
Query: 371 PSSTSQYTP 345
P+S QY+P
Sbjct: 1710 PTS-PQYSP 1717
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1622 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1681
Query: 371 PSSTSQYTP 345
P+S QY+P
Sbjct: 1682 PTS-PQYSP 1689
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1545 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1604
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1605 PTSPS-YSP 1612
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1580 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1639
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1640 PTSPS-YSP 1647
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1608 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1667
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1668 PTSPS-YSP 1675
[85][TOP]
>UniRef100_C4R4Y0 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4R4Y0_PICPG
Length = 1743
Score = 68.2 bits (165), Expect(2) = 4e-14
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1611 PTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1667
Score = 33.5 bits (75), Expect(2) = 4e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1563 TSPSYSPTSPSYSPTSP 1579
Score = 67.8 bits (164), Expect(2) = 5e-14
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1597 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1653
Score = 33.5 bits (75), Expect(2) = 5e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1570 TSPSYSPTSPSYSPTSP 1586
Score = 68.9 bits (167), Expect(2) = 7e-14
Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1674 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPAS-PQYSPSR 1732
Query: 338 NDKDERGKD 312
+ + K+
Sbjct: 1733 HSPNGESKE 1741
Score = 32.0 bits (71), Expect(2) = 7e-14
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P YSPTSP
Sbjct: 1619 TSPSYSPTSPQYSPTSP 1635
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1632 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1688
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1653 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1709
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1577 TSPSYSPTSPSYSPTSP 1593
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1598 TSPSYSPTSPSYSPTSP 1614
Score = 66.6 bits (161), Expect(2) = 2e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1583 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTS-PQYSP 1639
Score = 33.1 bits (74), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1556 TSPGYSPTSPSYSPTSP 1572
Score = 67.0 bits (162), Expect(2) = 3e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1562 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1618
Score = 31.6 bits (70), Expect(2) = 3e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1549 TSPRYSPTSPGYSPTSP 1565
Score = 66.2 bits (160), Expect(2) = 4e-12
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1560 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1611
Score = 28.5 bits (62), Expect(2) = 4e-12
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP ++ T P YSPTSP
Sbjct: 1542 TSPGFAPTSPRYSPTSP 1558
Score = 65.5 bits (158), Expect(2) = 4e-11
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1548 PTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1604
Score = 26.2 bits (56), Expect(2) = 4e-11
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP ++ T P ++PTSP
Sbjct: 1535 TSPGFAPTSPGFAPTSP 1551
Score = 62.4 bits (150), Expect(2) = 4e-10
Identities = 30/53 (56%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
++P+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1546 FAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1597
Score = 25.8 bits (55), Expect(2) = 4e-10
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP S T P ++PTSP
Sbjct: 1528 TSPGLSATSPGFAPTSP 1544
Score = 60.1 bits (144), Expect = 1e-07
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P +S P ++P+SP ++P+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1530 PGLSATSPG---FAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSP 1586
Query: 359 SQYTP 345
S Y+P
Sbjct: 1587 S-YSP 1590
Score = 58.5 bits (140), Expect = 3e-07
Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SPQ+SP S YSP+ P YS
Sbjct: 1593 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYS 1652
Query: 371 PSSTSQYTP 345
P+S QY+P
Sbjct: 1653 PTS-PQYSP 1660
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1565 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1624
Query: 371 PSSTSQYTP 345
P+S QY+P
Sbjct: 1625 PTS-PQYSP 1632
Score = 57.4 bits (137), Expect = 7e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1558 PGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1617
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1618 PTSPS-YSP 1625
Score = 56.6 bits (135), Expect = 1e-06
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1579 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYS 1638
Query: 371 PSSTSQYTP 345
P+S QY+P
Sbjct: 1639 PTS-PQYSP 1646
Score = 55.5 bits (132), Expect = 3e-06
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = -3
Query: 506 SIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
S Y P+SP S +SP + SP ++P+SP++SP S GYSP+ P YSP+S S Y+P
Sbjct: 1523 SPYQPTSPGLSATSPGFAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPS-YSP 1576
[86][TOP]
>UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U396_PHYPA
Length = 1742
Score = 68.2 bits (165), Expect(2) = 4e-14
Identities = 33/60 (55%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP Y+P+SP +SP S YSP+ PGYSP+S S Y+P +
Sbjct: 1643 PTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPS-YSPSS 1701
Score = 33.5 bits (75), Expect(2) = 4e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1616 TSPSYSPTSPSYSPTSP 1632
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S +Y+P +
Sbjct: 1671 PTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPTS-PRYSPSS 1729
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1623 TSPSYSPTSPSYSPTSP 1639
Score = 66.6 bits (161), Expect(2) = 2e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y P
Sbjct: 1615 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPS-YAP 1671
Score = 66.2 bits (160), Expect(2) = 2e-13
Identities = 32/49 (65%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 357
YSP+SP+YSPSSP S SP YSP+SP +SP S YSPS P YSP+S S
Sbjct: 1690 YSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPTSPRYSPSSPSYSPTSPS 1738
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1637 TSPSYSPTSPSYSPTSP 1653
Score = 33.1 bits (74), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1581 TSPGYSPTSPSYSPTSP 1597
Score = 64.7 bits (156), Expect(2) = 4e-13
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P Y+P+SP YSP+SP S SP YSP+SP +SPS+ YSP+ P YSP+S + Y+P
Sbjct: 1664 PTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPA-YSP 1720
Score = 33.5 bits (75), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1630 TSPSYSPTSPSYSPTSP 1646
Score = 65.9 bits (159), Expect(2) = 6e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+Y+P+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1601 PTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1657
Score = 32.0 bits (71), Expect(2) = 6e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P YSPTSP
Sbjct: 1588 TSPSYSPTSPGYSPTSP 1604
Score = 65.1 bits (157), Expect(2) = 1e-12
Identities = 31/53 (58%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1599 YSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1650
Score = 31.6 bits (70), Expect(2) = 1e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1560 TSPGYSPTSPGYSPTSP 1576
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP Y+P+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1587 PTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1643
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1567 TSPGYSPTSPGYSPTSP 1583
Score = 66.2 bits (160), Expect(2) = 2e-12
Identities = 33/53 (62%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP YSP+SP S SP YSP+SP +SP S GYSP+ P YSP+S S Y P
Sbjct: 1564 YSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPS-YAP 1615
Score = 29.6 bits (65), Expect(2) = 2e-12
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSPTSP
Sbjct: 1554 SPGYSPTSPGYSPTSP 1569
Score = 60.1 bits (144), Expect(2) = 1e-11
Identities = 28/48 (58%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGY 375
P YSPSSP+YSP+SP S SP YSP+SP++SPS+ YSP+ P Y
Sbjct: 1692 PTSPSYSPSSPSYSPTSPSYSPTSPAYSPTSPRYSPSSPSYSPTSPSY 1739
Score = 33.5 bits (75), Expect(2) = 1e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1644 TSPSYSPTSPSYSPTSP 1660
Score = 63.5 bits (153), Expect(2) = 5e-11
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP YSP+SP S SP YSP+SP +SP S Y+P+ P YSP+S S Y+P
Sbjct: 1578 YSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPS-YSP 1629
Score = 27.7 bits (60), Expect(2) = 5e-11
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS P YSPTSP
Sbjct: 1546 SSPGYSPLSPGYSPTSP 1562
Score = 58.2 bits (139), Expect(2) = 1e-10
Identities = 32/55 (58%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1585 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPS--YSPTSPSYSPTSPS-YSP 1636
Score = 31.6 bits (70), Expect(2) = 1e-10
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1574 TSPGYSPTSPGYSPTSP 1590
Score = 68.6 bits (166), Expect = 3e-10
Identities = 36/58 (62%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ YSPSSP YSP SP S SP YSP+SP +SP S GYSP+ PGYSP+S S Y+P
Sbjct: 1538 PSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPS-YSP 1594
Score = 67.8 bits (164), Expect = 5e-10
Identities = 34/53 (64%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+SPSSP YSPSSP S +SP YSP+SP +SP S GYSP+ PGYSP+S Y+P
Sbjct: 1536 FSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPG-YSP 1587
Score = 54.3 bits (129), Expect(2) = 6e-10
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP+YSP +SP S SP YSP+SP +SP S Y+P+ P YSP+S
Sbjct: 1622 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSP 1681
Query: 359 SQYTP 345
S Y+P
Sbjct: 1682 S-YSP 1685
Score = 33.1 bits (74), Expect(2) = 6e-10
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1595 TSPGYSPTSPSYSPTSP 1611
Score = 67.0 bits (162), Expect = 9e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S YSP+SP YSP+SP + SP YSP+SP +SP S GYSP+ P YS
Sbjct: 1639 PSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYS 1698
Query: 371 PSSTSQYTP 345
PSS S Y+P
Sbjct: 1699 PSSPS-YSP 1706
Score = 58.5 bits (140), Expect(2) = 4e-09
Identities = 33/56 (58%), Positives = 40/56 (71%), Gaps = 4/56 (7%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSG---VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP YSP+SP G SP YSP+SP +SP S YSP+ PGYSP+S S Y+P
Sbjct: 1557 YSPTSPGYSPTSP---GYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPS-YSP 1608
Score = 26.2 bits (56), Expect(2) = 4e-09
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS + P YSP SP
Sbjct: 1539 SSPGYSPSSPGYSPLSP 1555
Score = 45.1 bits (105), Expect(2) = 5e-07
Identities = 24/43 (55%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGY 396
P+ YSP+SP+YSP+SP S SP YSPSSP SPS Y
Sbjct: 1699 PSSPSYSPTSPSYSPTSPAYSPTSPRYSPSSPSYSPTSPSYRY 1741
Score = 32.3 bits (72), Expect(2) = 5e-07
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P+YSPTSP
Sbjct: 1651 TSPSYSPTSPAYSPTSP 1667
Score = 56.2 bits (134), Expect = 2e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1597 PGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1656
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1657 PTSPA-YSP 1664
Score = 55.8 bits (133), Expect = 2e-06
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SP+ +Y+P+SP S SP YSP+SP +SP S YSPS P YS
Sbjct: 1646 PSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPSYS 1705
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1706 PTSPS-YSP 1713
[87][TOP]
>UniRef100_A1YIA7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pichia kudriavzevii
RepID=A1YIA7_ISSOR
Length = 1647
Score = 68.2 bits (165), Expect(2) = 4e-14
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1549 PTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1605
Score = 33.5 bits (75), Expect(2) = 4e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1529 TSPSYSPTSPSYSPTSP 1545
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1570 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1626
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1536 TSPSYSPTSPSYSPTSP 1552
Score = 67.8 bits (164), Expect(2) = 1e-13
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1535 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1591
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S S Y+P
Sbjct: 1591 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPS-YSP 1647
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1543 TSPSYSPTSPSYSPTSP 1559
Score = 32.3 bits (72), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1522 TSPAYSPTSPSYSPTSP 1538
Score = 67.0 bits (162), Expect(2) = 2e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1507 PTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1563
Score = 32.3 bits (72), Expect(2) = 2e-13
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P+YSPTSP
Sbjct: 1473 TSPSYSPTSPAYSPTSP 1489
Score = 67.0 bits (162), Expect(2) = 3e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1521 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTS-PQYSP 1577
Score = 32.0 bits (71), Expect(2) = 3e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+Y T PSYSPTSP
Sbjct: 1466 TSPSYGPTSPSYSPTSP 1482
Score = 66.2 bits (160), Expect(2) = 7e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1500 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1556
Score = 31.2 bits (69), Expect(2) = 7e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1480 TSPAYSPTSPAYSPTSP 1496
Score = 65.9 bits (159), Expect(2) = 2e-12
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1479 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPS-YSP 1535
Score = 30.4 bits (67), Expect(2) = 2e-12
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+Y T PSY PTSP
Sbjct: 1459 TSPSYGPTSPSYGPTSP 1475
Score = 64.3 bits (155), Expect(2) = 1e-10
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1472 PTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1528
Score = 25.4 bits (54), Expect(2) = 1e-10
Identities = 12/18 (66%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
Frame = -1
Query: 553 TSP-NYSXTFPSYSPTSP 503
TSP Y T PSY PTSP
Sbjct: 1451 TSPFGYGATSPSYGPTSP 1468
Score = 63.2 bits (152), Expect = 1e-08
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y P+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1465 PTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1521
Score = 60.8 bits (146), Expect = 6e-08
Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y P+SP+Y P+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1463 YGPTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1514
Score = 58.5 bits (140), Expect = 3e-07
Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SPQ+SP S YSP+ P YS
Sbjct: 1531 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYS 1590
Query: 371 PSSTSQYTP 345
P+S QY+P
Sbjct: 1591 PTS-PQYSP 1598
Score = 57.0 bits (136), Expect = 9e-07
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y +SP+Y P+SP SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1456 YGATSPSYGPTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1507
Score = 54.7 bits (130), Expect = 4e-06
Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSST 360
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1486 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSP 1545
Query: 359 SQYTP 345
S Y+P
Sbjct: 1546 S-YSP 1549
[88][TOP]
>UniRef100_Q75A34 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Eremothecium
gossypii RepID=RPB1_ASHGO
Length = 1745
Score = 67.8 bits (164), Expect(2) = 5e-14
Identities = 37/89 (41%), Positives = 47/89 (52%), Gaps = 21/89 (23%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS------ 357
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 356 --------------QYTPQTNDKDERGKD 312
Y+P N+ D+ KD
Sbjct: 1712 SYSPTSPQYSPRSPSYSPSFNNNDKEQKD 1740
Score = 33.5 bits (75), Expect(2) = 5e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1597 TSPSYSPTSPSYSPTSP 1613
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1568 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1624
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1589 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1645
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1610 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1631 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1687
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1555 TSPSYSPTSPSYSPTSP 1571
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1562 TSPSYSPTSPSYSPTSP 1578
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1569 TSPSYSPTSPSYSPTSP 1585
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1576 TSPSYSPTSPSYSPTSP 1592
Score = 59.7 bits (143), Expect(2) = 1e-11
Identities = 33/66 (50%), Positives = 38/66 (57%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTN 336
P YSP+SP+YSP+SP S SP YSP+SPQ YSP P YSPS + Q
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQ------YSPRSPSYSPSFNNNDKEQ-- 1738
Query: 335 DKDERG 318
KDE G
Sbjct: 1739 -KDENG 1743
Score = 33.5 bits (75), Expect(2) = 1e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1632 TSPSYSPTSPSYSPTSP 1648
Score = 67.4 bits (163), Expect = 7e-10
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1547 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1603
Score = 64.3 bits (155), Expect = 6e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+SP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1545 FSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1596
Score = 57.8 bits (138), Expect = 5e-07
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = -3
Query: 491 SSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
SSP +SP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1541 SSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1589
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1564 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1623
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1624 PTSPS-YSP 1631
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1592 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1651
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1652 PTSPS-YSP 1659
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1627 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1686
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1687 PTSPS-YSP 1694
Score = 57.0 bits (136), Expect = 9e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1550 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1609
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1610 PTSPS-YSP 1617
Score = 56.6 bits (135), Expect = 1e-06
Identities = 34/69 (49%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1543 PGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1602
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1603 PTSPS-YSP 1610
[89][TOP]
>UniRef100_A5DCV3 DNA-directed RNA polymerase II subunit RPB1 (Fragments) n=1
Tax=Pichia guilliermondii RepID=RPB1_PICGU
Length = 1579
Score = 67.8 bits (164), Expect(2) = 5e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1485 PTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS-PQYSP 1541
Score = 33.5 bits (75), Expect(2) = 5e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1430 TSPSYSPTSPSYSPTSP 1446
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1408 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1464
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1429 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1485
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1388 TSPSYSPTSPSYSPTSP 1404
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1395 TSPSYSPTSPSYSPTSP 1411
Score = 66.2 bits (160), Expect(2) = 2e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1471 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPS-YSP 1527
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1416 TSPSYSPTSPSYSPTSP 1432
Score = 64.7 bits (156), Expect(2) = 4e-13
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1450 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1501
Score = 33.5 bits (75), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1402 TSPSYSPTSPSYSPTSP 1418
Score = 67.0 bits (162), Expect(2) = 3e-12
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1387 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1443
Score = 28.5 bits (62), Expect(2) = 3e-12
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP Y T P+YSPTSP
Sbjct: 1375 SPGYGVTSPTYSPTSP 1390
Score = 72.0 bits (175), Expect = 3e-11
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 9/81 (11%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P + P YSP+SP+YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S
Sbjct: 1499 PTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPAYSPTSPQYSPNS- 1557
Query: 359 SQYTP--------QTNDKDER 321
QY+P Q +DKD++
Sbjct: 1558 PQYSPRSPLYSPDQNDDKDKK 1578
Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1385 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1436
Score = 62.8 bits (151), Expect = 2e-08
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y +SPTYSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1378 YGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1429
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1390 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1449
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1450 PTSPS-YSP 1457
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1425 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1484
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1485 PTSPS-YSP 1492
Score = 57.4 bits (137), Expect = 7e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1383 PTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1442
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1443 PTSPS-YSP 1450
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSPSTG-YSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP++ YSP+ P YS
Sbjct: 1453 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYS 1512
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1513 PTSPS-YSP 1520
Score = 55.1 bits (131), Expect = 3e-06
Identities = 28/53 (52%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y +SP Y +SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1371 YGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1422
Score = 53.5 bits (127), Expect = 1e-05
Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y +SP Y +SP SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1364 YGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1415
[90][TOP]
>UniRef100_C5DXL0 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DXL0_ZYGRC
Length = 1744
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1701
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1590 TSPSYSPTSPSYSPTSP 1606
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1589 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1645
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1610 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1631 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS-YSP 1687
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1569 TSPSYSPTSPSYSPTSP 1585
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1576 TSPSYSPTSPSYSPTSP 1592
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1583 TSPSYSPTSPSYSPTSP 1599
Score = 67.0 bits (162), Expect(2) = 3e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1568 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1624
Score = 31.6 bits (70), Expect(2) = 3e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T PSYSPTSP
Sbjct: 1541 SSPTYSPTSPSYSPTSP 1557
Score = 74.3 bits (181), Expect = 5e-12
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 5/80 (6%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1662 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYS 1721
Query: 371 PSSTSQYTPQTNDKDERGKD 312
P S + Y+P + +D+R KD
Sbjct: 1722 PGSPT-YSPSSPKQDDREKD 1740
Score = 67.4 bits (163), Expect = 7e-10
Identities = 33/58 (56%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1540 PSSPTYSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1596
Score = 67.0 bits (162), Expect = 9e-10
Identities = 36/65 (55%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1557 PSYSPPSPN---YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1613
Query: 359 SQYTP 345
S Y+P
Sbjct: 1614 S-YSP 1617
Score = 66.6 bits (161), Expect = 1e-09
Identities = 33/53 (62%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+SPSSPTYSP+SP S SP YSP SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1538 FSPSSPTYSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1589
Score = 58.5 bits (140), Expect(2) = 2e-09
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1547 PTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1603
Score = 27.3 bits (59), Expect(2) = 2e-09
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP +S + P+YSPTSP
Sbjct: 1534 SSPGFSPSSPTYSPTSP 1550
Score = 58.9 bits (141), Expect = 2e-07
Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = -3
Query: 491 SSPTYSPSSPYNSGVSPDYSPSSPQFS-PSTGYSPSQPGYSPSSTSQYTP 345
SSP +SPSSP S SP YSP+SP +S PS YSP+ P YSP+S S Y+P
Sbjct: 1534 SSPGFSPSSPTYSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPS-YSP 1582
Score = 58.2 bits (139), Expect = 4e-07
Identities = 33/60 (55%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1554 PTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1610
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1585 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1644
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1645 PTSPS-YSP 1652
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1613 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYS 1672
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1673 PTSPS-YSP 1680
[91][TOP]
>UniRef100_UPI0000F24379 DNA-directed RNA polymerase II largest subunit (RNA polymerase II
subunit 1) (B220) n=1 Tax=Pichia stipitis CBS 6054
RepID=UPI0000F24379
Length = 1739
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1573 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1629
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1636 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS-PQYSP 1692
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1546 TSPSYSPTSPSYSPTSP 1562
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1581 TSPSYSPTSPSYSPTSP 1597
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1594 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1650
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1671
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1657 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPLYSPTS-PQYSP 1713
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP S S +P
Sbjct: 1671 PTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPLYSPTSPQYSPTSPQYSPGSPEYSPNSP 1730
Query: 344 QTNDK 330
+T DK
Sbjct: 1731 KTEDK 1735
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1553 TSPSYSPTSPSYSPTSP 1569
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1560 TSPSYSPTSPSYSPTSP 1576
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1602 TSPSYSPTSPSYSPTSP 1618
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1616 TSPSYSPTSPSYSPTSP 1632
Score = 67.0 bits (162), Expect(2) = 1e-12
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1559 PTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1615
Score = 29.6 bits (65), Expect(2) = 1e-12
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP Y T PSYSPTSP
Sbjct: 1540 SPGYGGTSPSYSPTSP 1555
Score = 66.2 bits (160), Expect = 1e-09
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1552 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1608
Score = 65.9 bits (159), Expect = 2e-09
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1550 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPS-YSP 1601
Score = 61.2 bits (147), Expect = 5e-08
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y +SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1543 YGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPS-YSP 1594
Score = 58.9 bits (141), Expect = 2e-07
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1566 PTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1622
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1590 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1649
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1650 PTSPS-YSP 1657
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1618 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1677
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1678 PTSPS-YSP 1685
Score = 57.0 bits (136), Expect = 9e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1576 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1635
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1636 PTSPS-YSP 1643
Score = 56.6 bits (135), Expect = 1e-06
Identities = 34/69 (49%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1569 PSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1628
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1629 PTSPS-YSP 1636
[92][TOP]
>UniRef100_C4Y5N3 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4Y5N3_CLAL4
Length = 281
Score = 67.4 bits (163), Expect(2) = 7e-14
Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP S S Y+P++
Sbjct: 211 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPGSPS-YSPRS 269
Query: 338 NDKDERGKD 312
++ +D
Sbjct: 270 PSYGDKKED 278
Score = 33.5 bits (75), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 156 TSPSYSPTSPSYSPTSP 172
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 106 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 162
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 127 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 183
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 148 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 204
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 169 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 225
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 190 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 246
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 86 TSPSYSPTSPSYSPTSP 102
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 93 TSPSYSPTSPSYSPTSP 109
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 100 TSPSYSPTSPSYSPTSP 116
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 114 TSPSYSPTSPSYSPTSP 130
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 135 TSPSYSPTSPSYSPTSP 151
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SPQ+SP S YSP P YSP S S +
Sbjct: 218 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPGSPSYSPRSPSYGDKKE 277
Query: 338 NDK 330
++K
Sbjct: 278 DEK 280
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 163 TSPSYSPTSPSYSPTSP 179
Score = 67.0 bits (162), Expect(2) = 8e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 85 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 141
Score = 30.4 bits (67), Expect(2) = 8e-13
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y T P+YSPTSP
Sbjct: 72 TSPGYGGTSPTYSPTSP 88
Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 83 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 134
Score = 62.8 bits (151), Expect = 2e-08
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y +SPTYSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 76 YGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 127
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 186 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 245
Query: 371 PSSTSQYTP 345
P+S QY+P
Sbjct: 246 PTS-PQYSP 253
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 88 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 147
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 148 PTSPS-YSP 155
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 123 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 182
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 183 PTSPS-YSP 190
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 151 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 210
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 211 PTSPS-YSP 218
Score = 57.4 bits (137), Expect = 7e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 81 PTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 140
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 141 PTSPS-YSP 148
[93][TOP]
>UniRef100_C3ZES3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3ZES3_BRAFL
Length = 1934
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1639 TSPSYSPTSPSYSPTSP 1655
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1646 TSPSYSPTSPSYSPTSP 1662
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 32/58 (55%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP+Y+P+SP++SP S YSP+ P YSP+S S Y+P
Sbjct: 1722 PTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPS-YSP 1778
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1667 TSPSYSPTSPSYSPTSP 1683
Score = 64.7 bits (156), Expect(2) = 4e-13
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P Y+P+S +Y+P
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTS-PKYSP 1757
Score = 33.5 bits (75), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1653 TSPSYSPTSPSYSPTSP 1669
Score = 63.5 bits (153), Expect(2) = 2e-11
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQ---FSPST-GYSPSQPGYSPSSTSQYT 348
P Y+P +P YSP+SP S SP YSP+SP+ +SP+T GYSP+ P YSP S
Sbjct: 1866 PTSPSYTPDTPKYSPTSPKYSPTSPTYSPTSPKGSTYSPTTPGYSPASPTYSPESPESRA 1925
Query: 347 PQTNDKDE 324
Q ++DE
Sbjct: 1926 TQEEEEDE 1933
Score = 28.9 bits (63), Expect(2) = 2e-11
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS P+Y+PTSP
Sbjct: 1846 TSPKYSPASPTYTPTSP 1862
Score = 67.0 bits (162), Expect(2) = 5e-11
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1617 PTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 24.3 bits (51), Expect(2) = 5e-11
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS P+Y P SP
Sbjct: 1590 SPSYSPASPAYMPRSP 1605
Score = 58.9 bits (141), Expect(2) = 1e-10
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP SPS YSP+ P YSP+S S Y+P
Sbjct: 1624 PTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPS-YSP 1680
Score = 31.2 bits (69), Expect(2) = 1e-10
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T PSYSPTSP
Sbjct: 1612 SPGYSPTSPSYSPTSP 1627
Score = 55.8 bits (133), Expect(2) = 2e-10
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPSTGYSPSQPGYSPSSTSQYT 348
P YSP+SP+YSP+SP + SP YSP+SP SPS YSP+ P YSP+ S T
Sbjct: 1729 PTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPS--YSPASPSYSPTILSNLT 1785
Score = 33.5 bits (75), Expect(2) = 2e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1674 TSPSYSPTSPSYSPTSP 1690
Score = 68.9 bits (167), Expect = 2e-10
Identities = 36/70 (51%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Frame = -3
Query: 551 ISKL*PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGY 375
+++L P ++ V +++ YSPSSP YSPSSP S SP YSPSS ++SP S YSPS P Y
Sbjct: 1784 LTQLQPHLTPVHSHVTQYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKY 1843
Query: 374 SPSSTSQYTP 345
+P+S +Y+P
Sbjct: 1844 TPTS-PKYSP 1852
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1627 PSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1686
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1687 PTSPS-YSP 1694
Score = 53.9 bits (128), Expect(2) = 6e-10
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP+YSP +SP S SP YSP+SP ++P S YSP+ P YSP+S
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSP 1767
Query: 359 SQYTP 345
S Y+P
Sbjct: 1768 S-YSP 1771
Score = 33.5 bits (75), Expect(2) = 6e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1660 TSPSYSPTSPSYSPTSP 1676
Score = 53.5 bits (127), Expect(2) = 8e-10
Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 26/83 (31%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPS------------SPYNSGV------SPDYSPSSPQFSP------ 408
P YSP+SP+YSP+ +P +S V SP YSPSSP++SP
Sbjct: 1764 PTSPSYSPASPSYSPTILSNLTQLQPHLTPVHSHVTQYSPSSPKYSPSSPKYSPTSPTYS 1823
Query: 407 --STGYSPSQPGYSPSSTSQYTP 345
S YSP+ P YSP ST +YTP
Sbjct: 1824 PSSAKYSPASPSYSP-STPKYTP 1845
Score = 33.5 bits (75), Expect(2) = 8e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1709 TSPSYSPTSPSYSPTSP 1725
Score = 66.6 bits (161), Expect = 1e-09
Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 63.9 bits (154), Expect = 7e-09
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTY+P+SP S SP Y+P +P++SP S YSP+ P YSP+S S Y+P
Sbjct: 1845 PTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTYSPTSPKGSTYSP 1904
Query: 344 QT 339
T
Sbjct: 1905 TT 1906
Score = 62.4 bits (150), Expect = 2e-08
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSPSS YSP+SP S +P Y+P+SP++SP S Y+P+ P YSP+S S YTP T
Sbjct: 1817 PTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPS-YTPDT 1875
Score = 61.6 bits (148), Expect = 4e-08
Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ + YSP+SP+YSPS+P + SP YSP+SP ++P S YSP+ P Y+P T +Y+P
Sbjct: 1824 PSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTP-DTPKYSP 1880
Score = 60.8 bits (146), Expect = 6e-08
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+P SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1609 TPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 59.7 bits (143), Expect = 1e-07
Identities = 36/83 (43%), Positives = 44/83 (53%), Gaps = 19/83 (22%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS---------------- 405
P S PN Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1739 PSYSPTSPN---YTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTILSNLTQLQPHLTPVH 1795
Query: 404 ---TGYSPSQPGYSPSSTSQYTP 345
T YSPS P YSPSS +Y+P
Sbjct: 1796 SHVTQYSPSSPKYSPSS-PKYSP 1817
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1683 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1742
Query: 371 PSSTSQYTP 345
P+S + YTP
Sbjct: 1743 PTSPN-YTP 1750
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1714
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1715 PTSPS-YSP 1722
[94][TOP]
>UniRef100_UPI000179348F PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179348F
Length = 1862
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1672 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1728
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1652 TSPSYSPTSPSYSPTSP 1668
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSPS P Y+ SS S YTP
Sbjct: 1693 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYAASSPS-YTP 1749
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1659 TSPSYSPTSPSYSPTSP 1675
Score = 67.0 bits (162), Expect(2) = 7e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1707
Score = 30.4 bits (67), Expect(2) = 7e-13
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -1
Query: 544 NYSXTFPSYSPTSPFILH 491
NYS T PSYSPTSP H
Sbjct: 1629 NYSPTSPSYSPTSPSYSH 1646
Score = 53.9 bits (128), Expect(2) = 6e-10
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 20/79 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--------------------GY 396
P YSP+SP+YSP+SP S SP Y+ SSP ++PS Y
Sbjct: 1714 PTSPSYSPTSPSYSPTSPSYSPSSPQYAASSPSYTPSATSGTSNYKYSPTSPSLAVSPTY 1773
Query: 395 SPSQPGYSPSSTSQYTPQT 339
SP+ P YSPS+ S Y+P +
Sbjct: 1774 SPTSPMYSPSNAS-YSPSS 1791
Score = 33.5 bits (75), Expect(2) = 6e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1666 TSPSYSPTSPSYSPTSP 1682
Score = 66.6 bits (161), Expect = 1e-09
Identities = 36/67 (53%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Frame = -3
Query: 536 PDISIVFPNIS--IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS 366
P S P+ S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1635 PSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 365 STSQYTP 345
S S Y+P
Sbjct: 1695 SPS-YSP 1700
Score = 52.4 bits (124), Expect(2) = 2e-09
Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 13/66 (19%)
Frame = -3
Query: 500 YSPSSP------TYSPSSPYNSGVSPDYSPSSPQFSPSTG-------YSPSQPGYSPSST 360
YSP+SP TYSP+SP S + YSPSS Q +P+ G YSPS P YSP++
Sbjct: 1760 YSPTSPSLAVSPTYSPTSPMYSPSNASYSPSSLQHTPNAGGTQYNQSYSPSSPVYSPTNF 1819
Query: 359 SQYTPQ 342
S +P+
Sbjct: 1820 SMASPR 1825
Score = 33.5 bits (75), Expect(2) = 2e-09
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1708 TSPSYSPTSPSYSPTSP 1724
Score = 63.2 bits (152), Expect = 1e-08
Identities = 37/70 (52%), Positives = 48/70 (68%), Gaps = 6/70 (8%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSP-YN----SGVSPDYSPSSPQFSP-STGYSPSQPGY 375
P S + PN + YSP+SP+YSP+SP Y+ S SP YSP+SP +SP S YSP+ P Y
Sbjct: 1619 PKYSSMSPNYN-YSPTSPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1677
Query: 374 SPSSTSQYTP 345
SP+S S Y+P
Sbjct: 1678 SPTSPS-YSP 1686
Score = 57.0 bits (136), Expect(2) = 5e-08
Identities = 30/55 (54%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG---YSPSQPGYSPSSTSQYTP 345
YSPSSP YSP++ S SP YSP+SP +SP G YSPS P YSP+S + P
Sbjct: 1807 YSPSSPVYSPTN--FSMASPRYSPTSPTYSPGVGSPHYSPSSPSYSPTSPNYSGP 1859
Score = 23.9 bits (50), Expect(2) = 5e-08
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTS 506
SP YS T P YSP++
Sbjct: 1770 SPTYSPTSPMYSPSN 1784
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1668 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1727
Query: 371 PSSTSQYTPQT 339
P+S S Y+P +
Sbjct: 1728 PTSPS-YSPSS 1737
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SPS+ Y+ S P Y+
Sbjct: 1689 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYAASSPSYT 1748
Query: 371 PSSTS 357
PS+TS
Sbjct: 1749 PSATS 1753
[95][TOP]
>UniRef100_UPI000179338A PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179338A
Length = 1862
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1672 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1728
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1652 TSPSYSPTSPSYSPTSP 1668
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSPS P Y+ SS S YTP
Sbjct: 1693 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYTASSPS-YTP 1749
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1659 TSPSYSPTSPSYSPTSP 1675
Score = 67.0 bits (162), Expect(2) = 7e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1707
Score = 30.4 bits (67), Expect(2) = 7e-13
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -1
Query: 544 NYSXTFPSYSPTSPFILH 491
NYS T PSYSPTSP H
Sbjct: 1629 NYSPTSPSYSPTSPSYSH 1646
Score = 53.9 bits (128), Expect(2) = 6e-10
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 20/79 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--------------------GY 396
P YSP+SP+YSP+SP S SP Y+ SSP ++PS Y
Sbjct: 1714 PTSPSYSPTSPSYSPTSPSYSPSSPQYTASSPSYTPSATSGASNYKYSPTSPSLAVSPTY 1773
Query: 395 SPSQPGYSPSSTSQYTPQT 339
SP+ P YSPS+ S Y+P +
Sbjct: 1774 SPTSPMYSPSNAS-YSPSS 1791
Score = 33.5 bits (75), Expect(2) = 6e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1666 TSPSYSPTSPSYSPTSP 1682
Score = 66.6 bits (161), Expect = 1e-09
Identities = 36/67 (53%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Frame = -3
Query: 536 PDISIVFPNIS--IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS 366
P S P+ S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1635 PSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 365 STSQYTP 345
S S Y+P
Sbjct: 1695 SPS-YSP 1700
Score = 52.0 bits (123), Expect(2) = 2e-09
Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 5/58 (8%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTS 357
P YSP+SP+YSP SP SP YSP+SP +SPS+ Y+ S P Y+PS+TS
Sbjct: 1700 PTSPSYSPTSPSYSPTSPSYSP----TSPSYSPTSPSYSPSSPQYTASSPSYTPSATS 1753
Score = 52.0 bits (123), Expect(2) = 2e-09
Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 13/66 (19%)
Frame = -3
Query: 500 YSPSSP------TYSPSSPYNSGVSPDYSPSSPQFSPSTG-------YSPSQPGYSPSST 360
YSP+SP TYSP+SP S + YSPSS Q +P+ G YSPS P YSP++
Sbjct: 1760 YSPTSPSLAVSPTYSPTSPMYSPSNASYSPSSVQHTPNAGVTQYNQSYSPSSPVYSPTNF 1819
Query: 359 SQYTPQ 342
S +P+
Sbjct: 1820 SLASPR 1825
Score = 33.5 bits (75), Expect(2) = 2e-09
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1673 TSPSYSPTSPSYSPTSP 1689
Score = 33.5 bits (75), Expect(2) = 2e-09
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1708 TSPSYSPTSPSYSPTSP 1724
Score = 63.2 bits (152), Expect = 1e-08
Identities = 37/70 (52%), Positives = 48/70 (68%), Gaps = 6/70 (8%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSP-YN----SGVSPDYSPSSPQFSP-STGYSPSQPGY 375
P S + PN + YSP+SP+YSP+SP Y+ S SP YSP+SP +SP S YSP+ P Y
Sbjct: 1619 PKYSSMSPNYN-YSPTSPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1677
Query: 374 SPSSTSQYTP 345
SP+S S Y+P
Sbjct: 1678 SPTSPS-YSP 1686
Score = 57.4 bits (137), Expect(2) = 4e-08
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG---YSPSQPGYSPSSTSQYTPQ 342
YSPSSP YSP++ S SP YSP+SP +SP G YSPS P YSP+S + P+
Sbjct: 1807 YSPSSPVYSPTN--FSLASPRYSPTSPTYSPGVGSPNYSPSSPSYSPTSPNYSGPE 1860
Score = 23.9 bits (50), Expect(2) = 4e-08
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTS 506
SP YS T P YSP++
Sbjct: 1770 SPTYSPTSPMYSPSN 1784
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1668 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1727
Query: 371 PSSTSQYTPQT 339
P+S S Y+P +
Sbjct: 1728 PTSPS-YSPSS 1737
Score = 58.2 bits (139), Expect = 4e-07
Identities = 35/68 (51%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1675 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1734
Query: 371 PSSTSQYT 348
PSS QYT
Sbjct: 1735 PSS-PQYT 1741
[96][TOP]
>UniRef100_P36594 DNA-directed RNA polymerase II subunit rpb1 n=1
Tax=Schizosaccharomyces pombe RepID=RPB1_SCHPO
Length = 1752
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1671
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1636 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1692
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1657 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1713
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1678 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1734
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1581 TSPSYSPTSPSYSPTSP 1597
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1588 TSPSYSPTSPSYSPTSP 1604
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1602 TSPSYSATSPSYSPTSP 1618
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1623 TSPSYSPTSPSYSPTSP 1639
Score = 67.8 bits (164), Expect(2) = 2e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1587 PTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1643
Score = 32.0 bits (71), Expect(2) = 2e-13
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T PSYSPTSP
Sbjct: 1574 SSPSYSPTSPSYSPTSP 1590
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 31/54 (57%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 357
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1699 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1752
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1644 TSPSYSPTSPSYSPTSP 1660
Score = 55.8 bits (133), Expect(2) = 2e-10
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1685 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1744
Query: 359 SQYTP 345
S Y+P
Sbjct: 1745 S-YSP 1748
Score = 33.5 bits (75), Expect(2) = 2e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1630 TSPSYSPTSPSYSPTSP 1646
Score = 64.3 bits (155), Expect(2) = 6e-10
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS-PSTGYSPSQPGYSPSSTSQYTP 345
P+ YSP+SP+YSP+SP S SP YSP+SP +S S YSP+ P YSP+S S Y+P
Sbjct: 1573 PSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPS-YSP 1629
Score = 23.1 bits (48), Expect(2) = 6e-10
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + P YS TSP
Sbjct: 1554 TSPSYSPSSPGYS-TSP 1569
Score = 66.6 bits (161), Expect = 1e-09
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S P+ YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1604 PSYSATSPS---YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1660
Query: 359 SQYTP 345
S Y+P
Sbjct: 1661 S-YSP 1664
Score = 58.5 bits (140), Expect = 3e-07
Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Frame = -3
Query: 548 SKL*PDISIVFPNISIYSP---SSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP 381
S + P + P+ S SP +SP Y PSSP S SP YSP+SP +SP S YSP+ P
Sbjct: 1545 SAMSPGYGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1604
Query: 380 GYSPSSTSQYTP 345
YS +S S Y+P
Sbjct: 1605 SYSATSPS-YSP 1615
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1632 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1691
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1692 PTSPS-YSP 1699
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1660 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1719
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1720 PTSPS-YSP 1727
Score = 55.1 bits (131), Expect = 3e-06
Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 12/76 (15%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP-----------TYSPSSPYNSGVSPDYSPSSPQFSP-STGYS 393
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YS
Sbjct: 1583 PSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1642
Query: 392 PSQPGYSPSSTSQYTP 345
P+ P YSP+S S Y+P
Sbjct: 1643 PTSPSYSPTSPS-YSP 1657
[97][TOP]
>UniRef100_B6JYP8 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JYP8_SCHJY
Length = 1748
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1592 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1648
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1613 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1669
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1634 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1690
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1565 TSPSYSPTSPSYSPTSP 1581
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1572 TSPSYSPTSPSYSPTSP 1588
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1579 TSPSYSPTSPSYSPTSP 1595
Score = 65.1 bits (157), Expect(2) = 3e-13
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP ++Q
Sbjct: 1655 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGHSAQ 1709
Score = 33.5 bits (75), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1600 TSPSYSPTSPSYSPTSP 1616
Score = 67.0 bits (162), Expect(2) = 6e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1571 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1627
Score = 30.8 bits (68), Expect(2) = 6e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T PSYSPTSP
Sbjct: 1558 SSPAYSPTSPSYSPTSP 1574
Score = 60.8 bits (146), Expect(2) = 6e-12
Identities = 33/71 (46%), Positives = 41/71 (57%), Gaps = 14/71 (19%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------------STGYSPSQPG 378
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P
Sbjct: 1669 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGHSAQNAQGRMSPRSPVYSPTSPS 1728
Query: 377 YSPSSTSQYTP 345
YSP+S S Y+P
Sbjct: 1729 YSPTSPS-YSP 1738
Score = 33.5 bits (75), Expect(2) = 6e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1614 TSPSYSPTSPSYSPTSP 1630
Score = 56.6 bits (135), Expect(2) = 1e-10
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP---GYSPSSTSQYT 348
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P SPS Y+
Sbjct: 1648 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS----YS 1703
Query: 347 PQTNDKDERGK 315
P + ++ +G+
Sbjct: 1704 PGHSAQNAQGR 1714
Score = 33.5 bits (75), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1593 TSPSYSPTSPSYSPTSP 1609
Score = 68.2 bits (165), Expect = 4e-10
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ YSPSSP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1550 PSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1606
Score = 67.0 bits (162), Expect = 9e-10
Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+SPSSP+YSPSSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1548 FSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1599
Score = 56.6 bits (135), Expect(2) = 9e-09
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSP-------TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ YSP+SP +YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1557 PSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1616
Query: 359 SQYTP 345
S Y+P
Sbjct: 1617 S-YSP 1620
Score = 26.9 bits (58), Expect(2) = 9e-09
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP +S + PSYSP+SP
Sbjct: 1544 SSPGFSPSSPSYSPSSP 1560
Score = 45.4 bits (106), Expect(2) = 2e-07
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 405
SP SP YSP+SP S SP YSP+SP++SP+
Sbjct: 1716 SPRSPVYSPTSPSYSPTSPSYSPTSPRYSPN 1746
Score = 33.5 bits (75), Expect(2) = 2e-07
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1663 TSPSYSPTSPSYSPTSP 1679
Score = 44.7 bits (104), Expect(2) = 3e-07
Identities = 26/63 (41%), Positives = 31/63 (49%), Gaps = 13/63 (20%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPS-------------SPYNSGVSPDYSPSSPQFSPSTGYSPSQPGY 375
P YSP+SP+YSP SP S SP YSP+SP YSP+ P Y
Sbjct: 1690 PTSPSYSPTSPSYSPGHSAQNAQGRMSPRSPVYSPTSPSYSPTSP------SYSPTSPRY 1743
Query: 374 SPS 366
SP+
Sbjct: 1744 SPN 1746
Score = 33.5 bits (75), Expect(2) = 3e-07
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1635 TSPSYSPTSPSYSPTSP 1651
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1567 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1626
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1627 PTSPS-YSP 1634
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1595 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1654
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1655 PTSPS-YSP 1662
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1630 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1689
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1690 PTSPS-YSP 1697
Score = 57.4 bits (137), Expect = 7e-07
Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = -3
Query: 491 SSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
SSP +SPSSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1544 SSPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1592
[98][TOP]
>UniRef100_C5E245 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5E245_LACTC
Length = 1740
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1567 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1623
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1588 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1644
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1609 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1665
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1630 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1686
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1707
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1554 TSPSYSPTSPSYSPTSP 1570
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1561 TSPSYSPTSPSYSPTSP 1577
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1568 TSPSYSPTSPSYSPTSP 1584
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1575 TSPSYSPTSPSYSPTSP 1591
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1596 TSPSYSPTSPSYSPTSP 1612
Score = 65.9 bits (159), Expect(2) = 2e-13
Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP P YSP S +
Sbjct: 1672 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGSPSYSPGSPKKENDND 1731
Query: 338 NDKDERGKD 312
N+ + +
Sbjct: 1732 NNNNNNNNN 1740
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1617 TSPSYSPTSPSYSPTSP 1633
Score = 67.4 bits (163), Expect = 7e-10
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1546 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1602
Score = 64.3 bits (155), Expect = 6e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+SP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1544 FSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1595
Score = 58.9 bits (141), Expect = 2e-07
Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1654 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1713
Query: 371 PSSTSQYTP----QTNDKDERGKD 312
P S S Y+P + ND D +
Sbjct: 1714 PGSPS-YSPGSPKKENDNDNNNNN 1736
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1563 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1622
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1623 PTSPS-YSP 1630
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1591 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1650
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1651 PTSPS-YSP 1658
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1626 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1685
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1686 PTSPS-YSP 1693
Score = 57.0 bits (136), Expect = 9e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1549 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1608
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1609 PTSPS-YSP 1616
Score = 56.6 bits (135), Expect = 1e-06
Identities = 28/50 (56%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = -3
Query: 491 SSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+SP +SP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1540 ASPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1588
Score = 56.6 bits (135), Expect = 1e-06
Identities = 34/69 (49%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1542 PGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1601
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1602 PTSPS-YSP 1609
[99][TOP]
>UniRef100_Q6CL79 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CL79_KLULA
Length = 1720
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1573 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1629
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1594 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1650
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1671
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1636 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1692
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1553 TSPSYSPTSPSYSPTSP 1569
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1560 TSPSYSPTSPSYSPTSP 1576
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1567 TSPSYSPTSPSYSPTSP 1583
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1581 TSPSYSPTSPSYSPTSP 1597
Score = 63.9 bits (154), Expect(2) = 7e-13
Identities = 32/68 (47%), Positives = 40/68 (58%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTN 336
P YSP+SP+YSP+SP S SP YSP+SP YSP+ P YSP S S P+
Sbjct: 1657 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP------SYSPTSPQYSPGSYSPAEPKQQ 1710
Query: 335 DKDERGKD 312
+ DE K+
Sbjct: 1711 ESDEEKKE 1718
Score = 33.5 bits (75), Expect(2) = 7e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1602 TSPSYSPTSPSYSPTSP 1618
Score = 67.0 bits (162), Expect(2) = 3e-12
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1552 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1608
Score = 28.5 bits (62), Expect(2) = 3e-12
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP +S T P YSPTSP
Sbjct: 1539 SSPGFSPTSPGYSPTSP 1555
Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1550 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1601
Score = 63.5 bits (153), Expect = 1e-08
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+SP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1543 FSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1594
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1555 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1614
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1615 PTSPS-YSP 1622
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1590 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1649
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1650 PTSPS-YSP 1657
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1618 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1677
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1678 PTSPS-YSP 1685
Score = 57.4 bits (137), Expect = 7e-07
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = -3
Query: 491 SSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
SSP +SP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1539 SSPGFSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1587
Score = 57.4 bits (137), Expect = 7e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1548 PGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1607
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1608 PTSPS-YSP 1615
[100][TOP]
>UniRef100_C4VAM1 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
RepID=C4VAM1_NOSCE
Length = 1612
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1481 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1537
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1502 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1558
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1523 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1579
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1461 TSPSYSPTSPSYSPTSP 1477
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1468 TSPSYSPTSPSYSPTSP 1484
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1475 TSPSYSPTSPSYSPTSP 1491
Score = 66.2 bits (160), Expect(2) = 2e-13
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+ + +
Sbjct: 1544 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSLSYSPTSPSYSPTGYKKDKDKK 1603
Query: 338 NDKDER 321
N++ R
Sbjct: 1604 NERKRR 1609
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1489 TSPSYSPTSPSYSPTSP 1505
Score = 67.0 bits (162), Expect = 9e-10
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1460 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1516
Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1458 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1509
Score = 64.7 bits (156), Expect = 4e-09
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = -3
Query: 548 SKL*PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
SK P +S+ Y +SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1435 SKYSPKLSLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1494
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1495 PTSPS-YSP 1502
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1463 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1522
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1523 PTSPS-YSP 1530
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1498 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1557
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1558 PTSPS-YSP 1565
Score = 57.0 bits (136), Expect = 9e-07
Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ YS
Sbjct: 1526 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSLSYS 1585
Query: 371 PSSTSQYTPQTNDKDERGKD 312
P+S S Y+P KD+ K+
Sbjct: 1586 PTSPS-YSPTGYKKDKDKKN 1604
[101][TOP]
>UniRef100_Q8SSC4 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Encephalitozoon
cuniculi RepID=RPB1_ENCCU
Length = 1599
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1489 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1545
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1510 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1566
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1469 TSPSYSPTSPSYSPTSP 1485
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1476 TSPSYSPTSPSYSPTSP 1492
Score = 57.8 bits (138), Expect(2) = 5e-11
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP---GYSPS---STS 357
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P SPS S S
Sbjct: 1517 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSVSMS 1576
Query: 356 QYTPQTNDKDERG 318
++ + K++ G
Sbjct: 1577 SFSNKNKSKNQDG 1589
Score = 33.5 bits (75), Expect(2) = 5e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1483 TSPSYSPTSPSYSPTSP 1499
Score = 55.8 bits (133), Expect(2) = 2e-10
Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+SP S SP YSP+SP +SP S YS S +S + S+ Q
Sbjct: 1531 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSVSMSSFSNKNKSK--NQD 1588
Query: 338 NDKDER 321
DK R
Sbjct: 1589 GDKKRR 1594
Score = 33.5 bits (75), Expect(2) = 2e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1490 TSPSYSPTSPSYSPTSP 1506
Score = 67.0 bits (162), Expect = 9e-10
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1468 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1524
Score = 63.5 bits (153), Expect = 1e-08
Identities = 31/52 (59%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
SP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1467 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1517
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1471 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1530
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 1531 PTSPS-YSP 1538
Score = 56.6 bits (135), Expect = 1e-06
Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1506 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1565
Query: 371 PSSTS 357
P+S S
Sbjct: 1566 PTSPS 1570
Score = 56.2 bits (134), Expect = 2e-06
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Frame = -3
Query: 530 ISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS 366
+S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1466 LSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1525
Query: 365 STSQYTP 345
S S Y+P
Sbjct: 1526 SPS-YSP 1531
[102][TOP]
>UniRef100_UPI000151A8B3 hypothetical protein PGUG_01105 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B3
Length = 1018
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 842 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 898
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 849 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 905
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 856 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 912
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 822 TSPSYSPTSPSYSPTSP 838
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 829 TSPSYSPTSPSYSPTSP 845
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 836 TSPSYSPTSPSYSPTSP 852
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS 366
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+
Sbjct: 863 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 913
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 843 TSPSYSPTSPSYSPTSP 859
Score = 67.0 bits (162), Expect(2) = 3e-12
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 821 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 877
Score = 28.5 bits (62), Expect(2) = 3e-12
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP Y T P+YSPTSP
Sbjct: 809 SPGYGVTSPTYSPTSP 824
Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 819 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 870
Score = 62.8 bits (151), Expect = 2e-08
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y +SPTYSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 812 YGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 863
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 824 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 883
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 884 PTSPS-YSP 891
Score = 57.4 bits (137), Expect = 7e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 817 PTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 876
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 877 PTSPS-YSP 884
Score = 42.0 bits (97), Expect(2) = 2e-06
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 405
P YSP+SP+YSP+SP S SP YSP+ + P+
Sbjct: 884 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTFAKLQPN 920
Score = 33.5 bits (75), Expect(2) = 2e-06
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 850 TSPSYSPTSPSYSPTSP 866
Score = 55.1 bits (131), Expect = 3e-06
Identities = 28/53 (52%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y +SP Y +SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 805 YGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 856
Score = 53.5 bits (127), Expect = 1e-05
Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y +SP Y +SP SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 798 YGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 849
[103][TOP]
>UniRef100_Q99366 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99366_SOYBN
Length = 625
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 456 PTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 512
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S
Sbjct: 470 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSP 529
Query: 359 SQYTP 345
S Y+P
Sbjct: 530 S-YSP 533
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 422 TSPSYSPTSPSYSPTSP 438
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 429 TSPSYSPTSPSYSPTSP 445
Score = 67.8 bits (164), Expect(2) = 2e-13
Identities = 34/53 (64%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SPTYSPSSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 398 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 449
Score = 31.6 bits (70), Expect(2) = 2e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 387 TSPGYSPTSPGYSPTSP 403
Score = 65.9 bits (159), Expect(2) = 4e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 442 PTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPS-YSP 498
Score = 64.7 bits (156), Expect(2) = 4e-13
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P Y+P S ++Y+P
Sbjct: 498 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQS-AKYSP 554
Score = 33.5 bits (75), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 443 TSPSYSPTSPSYSPTSP 459
Score = 32.3 bits (72), Expect(2) = 4e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 415 TSPAYSPTSPSYSPTSP 431
Score = 67.4 bits (163), Expect(2) = 7e-13
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 400 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 456
Score = 63.9 bits (154), Expect(2) = 7e-13
Identities = 33/48 (68%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
YSPSSP SPSSPY S SP+YSP+SP +SP S YSPS P YSPS T
Sbjct: 558 YSPSSPRLSPSSPY-SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSRT 604
Score = 33.5 bits (75), Expect(2) = 7e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 527 TSPSYSPTSPSYSPTSP 543
Score = 30.0 bits (66), Expect(2) = 7e-13
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T P YSPTSP
Sbjct: 380 SSPGYSPTSPGYSPTSP 396
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP Y+P S ++SPS YSPS P SPS S Y+P
Sbjct: 524 YSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPS--SPYSP 573
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 478 TSPSYSPTSPSYSPTSP 494
Score = 65.9 bits (159), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 421 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPA-YSP 477
Score = 30.4 bits (67), Expect(2) = 2e-12
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSP+SP
Sbjct: 394 TSPGYSPTSPTYSPSSP 410
Score = 62.0 bits (149), Expect(2) = 3e-12
Identities = 35/63 (55%), Positives = 44/63 (69%), Gaps = 6/63 (9%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSP-YN---SGVSPD--YSPSSPQFSPSTGYSPSQPGYSPSSTSQ 354
P YSP+SP+YSP+SP YN + SP YSPSSP+ SPS+ YSP+ P YSP+S S
Sbjct: 526 PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPS- 584
Query: 353 YTP 345
Y+P
Sbjct: 585 YSP 587
Score = 33.5 bits (75), Expect(2) = 3e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 485 TSPSYSPTSPSYSPTSP 501
Score = 59.7 bits (143), Expect(2) = 1e-11
Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 8/67 (11%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SP S GYSP+ P YSP+S
Sbjct: 484 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSP 543
Query: 359 SQYTPQT 339
S Y PQ+
Sbjct: 544 S-YNPQS 549
Score = 33.5 bits (75), Expect(2) = 1e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 436 TSPSYSPTSPSYSPTSP 452
Score = 68.6 bits (166), Expect = 3e-10
Identities = 35/58 (60%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P+ YSPSSP YSP+SP S SP YSP+SP +SPS+ GYSP+ P YSP+S S Y+P
Sbjct: 372 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS-YSP 428
Score = 67.4 bits (163), Expect = 7e-10
Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSPSSP YSPSSP S SP YSP+SP +SP S YSPS PGYSP+S + Y+P
Sbjct: 370 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 421
Score = 64.7 bits (156), Expect = 4e-09
Identities = 36/69 (52%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 438 PSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYS 497
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 498 PTSPS-YSP 505
Score = 50.8 bits (120), Expect(2) = 7e-09
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = -3
Query: 506 SIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 405
S YSP+SP YSP+SP S SP YSPSSP +SPS
Sbjct: 569 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS 602
Score = 33.1 bits (74), Expect(2) = 7e-09
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 520 TSPGYSPTSPSYSPTSP 536
Score = 53.9 bits (128), Expect(2) = 2e-08
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ YSP+SP YSP +SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 407 PSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 466
Query: 359 SQYTP 345
+ Y+P
Sbjct: 467 A-YSP 470
Score = 28.5 bits (62), Expect(2) = 2e-08
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS + P YSPTSP
Sbjct: 373 SSPGYSPSSPGYSPTSP 389
Score = 60.1 bits (144), Expect = 1e-07
Identities = 34/54 (62%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Frame = -3
Query: 500 YSP-SSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+SP SSP YSPSSP S SP YSP+SP +SP S GYSP+ P YSPSS Y+P
Sbjct: 362 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSP 414
Score = 58.9 bits (141), Expect = 2e-07
Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S GYSP+ P YS
Sbjct: 473 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYS 532
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 533 PTSPS-YSP 540
Score = 56.6 bits (135), Expect = 1e-06
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 417 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYS 476
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 477 PTSPS-YSP 484
[104][TOP]
>UniRef100_O94231 RNA polymerase II largest subunit (Fragment) n=1 Tax=Kluyveromyces
lactis RepID=O94231_KLULA
Length = 414
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 267 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 323
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 288 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 344
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 309 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 365
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 330 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 386
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 247 TSPSYSPTSPSYSPTSP 263
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 254 TSPSYSPTSPSYSPTSP 270
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 261 TSPSYSPTSPSYSPTSP 277
Score = 33.5 bits (75), Expect(2) = 9e-14
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 275 TSPSYSPTSPSYSPTSP 291
Score = 63.9 bits (154), Expect(2) = 7e-13
Identities = 32/68 (47%), Positives = 40/68 (58%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTN 336
P YSP+SP+YSP+SP S SP YSP+SP YSP+ P YSP S S P+
Sbjct: 351 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP------SYSPTSPQYSPGSYSPAEPKQQ 404
Query: 335 DKDERGKD 312
+ DE K+
Sbjct: 405 ESDEEKKE 412
Score = 33.5 bits (75), Expect(2) = 7e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 296 TSPSYSPTSPSYSPTSP 312
Score = 67.0 bits (162), Expect(2) = 3e-12
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 246 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 302
Score = 28.5 bits (62), Expect(2) = 3e-12
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP +S T P YSPTSP
Sbjct: 233 SSPGFSPTSPGYSPTSP 249
Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 244 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 295
Score = 63.5 bits (153), Expect = 1e-08
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+SP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 237 FSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 288
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 249 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 308
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 309 PTSPS-YSP 316
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 284 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 343
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 344 PTSPS-YSP 351
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 312 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 371
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 372 PTSPS-YSP 379
Score = 57.4 bits (137), Expect = 7e-07
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = -3
Query: 491 SSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
SSP +SP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 233 SSPGFSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 281
Score = 57.4 bits (137), Expect = 7e-07
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSP----TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S P+ S SPS +YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 242 PGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 301
Query: 371 PSSTSQYTP 345
P+S S Y+P
Sbjct: 302 PTSPS-YSP 309
[105][TOP]
>UniRef100_C5LSN8 P35 antigen, putative (Fragment) n=1 Tax=Perkinsus marinus ATCC
50983 RepID=C5LSN8_9ALVE
Length = 170
Score = 69.3 bits (168), Expect(2) = 1e-13
Identities = 34/72 (47%), Positives = 41/72 (56%), Gaps = 8/72 (11%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 80 PTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 139
Query: 359 SQYTPQTNDKDE 324
+ Y P DE
Sbjct: 140 AYYHPLVTSSDE 151
Score = 31.2 bits (69), Expect(2) = 1e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 25 TSPAYSPTSPAYSPTSP 41
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 24 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 80
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 45 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 101
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 66 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPAYSPTSPA-YSP 122
Score = 31.2 bits (69), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 4 TSPAYSPTSPAYSPTSP 20
Score = 31.2 bits (69), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 11 TSPAYSPTSPAYSPTSP 27
Score = 31.2 bits (69), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 18 TSPAYSPTSPAYSPTSP 34
Score = 53.5 bits (127), Expect(2) = 2e-09
Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQF----------SPSTGYSPSQPGYSPS 366
P YSP+SP YSP+SP S SP YSP+SP + P YSP+ P YS +
Sbjct: 108 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYYHPLVTSSDEGPVVRYSPTSPAYSNT 167
Query: 365 STS 357
S S
Sbjct: 168 SPS 170
Score = 32.3 bits (72), Expect(2) = 2e-09
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 95 TSPAYSPTSPSYSPTSP 111
Score = 53.9 bits (128), Expect(2) = 3e-09
Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
P YSP+SP YSP SP SP YSP+SP +SP S YSP+ P YSP+S S Y
Sbjct: 52 PTSPAYSPTSPAYSPTSPAYSP----TSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPS-Y 106
Query: 350 TP 345
+P
Sbjct: 107 SP 108
Score = 31.2 bits (69), Expect(2) = 3e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 32 TSPAYSPTSPAYSPTSP 48
Score = 64.7 bits (156), Expect = 4e-09
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 3 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 59
Score = 63.5 bits (153), Expect = 1e-08
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 52
Score = 53.5 bits (127), Expect(2) = 2e-07
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP YSP +SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 10 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 69
Query: 359 SQYTP 345
+ Y+P
Sbjct: 70 A-YSP 73
Score = 25.8 bits (55), Expect(2) = 2e-07
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
YS T P+YSPTSP
Sbjct: 1 YSPTSPAYSPTSP 13
Score = 53.5 bits (127), Expect = 1e-05
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP YSP +SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 31 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 90
Query: 359 SQYTP 345
+ Y+P
Sbjct: 91 A-YSP 94
[106][TOP]
>UniRef100_B6AG69 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AG69_9CRYT
Length = 1927
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 31/60 (51%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTPQT 339
P Y+P+SP YSPSSP+ + SP+YSPSSPQ++P+ YSPS P Y+P+S + Y+P +
Sbjct: 1806 PTSPSYNPASPNYSPSSPHYNPASPNYSPSSPQYNPALPNYSPSSPQYNPTSPN-YSPSS 1864
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T P YSPTSP
Sbjct: 1751 TSPNYSPTSPHYSPTSP 1767
Score = 62.0 bits (149), Expect(2) = 3e-12
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS----TSQY 351
P+ Y+P+SP YSPSSP + P+YSPSSPQ++P S YSPS P Y S+ + QY
Sbjct: 1820 PSSPHYNPASPNYSPSSPQYNPALPNYSPSSPQYNPTSPNYSPSSPNYVLSNGNIDSPQY 1879
Query: 350 TPQTNDKDE 324
+P + D+
Sbjct: 1880 SPSSPHYDQ 1888
Score = 33.5 bits (75), Expect(2) = 3e-12
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T P YSPTSP
Sbjct: 1765 TSPNYSPTSPHYSPTSP 1781
Score = 66.6 bits (161), Expect(2) = 4e-11
Identities = 32/60 (53%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP YSP+SP+ S SP+YSP+SP +SP S YSP+ P YSP+S + Y+P +
Sbjct: 1743 PTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPN-YSPSS 1801
Score = 25.0 bits (53), Expect(2) = 4e-11
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP P+YSPTSP
Sbjct: 1688 TSPGVEPLSPNYSPTSP 1704
Score = 68.6 bits (166), Expect = 3e-10
Identities = 38/69 (55%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP YSP+SP+ S SP+YSP+SP +SP S YSPS P YS
Sbjct: 1746 PHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSPHYS 1805
Query: 371 PSSTSQYTP 345
P+S S Y P
Sbjct: 1806 PTSPS-YNP 1813
Score = 68.2 bits (165), Expect = 4e-10
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYS 372
P S PN S YSP+SP YSPSSP+ S SP Y+P+SP +SPS+ Y+P+ P YS
Sbjct: 1774 PHYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPTSPSYNPASPNYSPSSPHYNPASPNYS 1833
Query: 371 PSSTSQYTP 345
PSS QY P
Sbjct: 1834 PSS-PQYNP 1841
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP YSP+SP+ S SP+YSPSSP +SP S Y+P+ P YS
Sbjct: 1760 PHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPTSPSYNPASPNYS 1819
Query: 371 PSSTSQYTP 345
PSS Y P
Sbjct: 1820 PSS-PHYNP 1827
Score = 67.0 bits (162), Expect = 9e-10
Identities = 37/74 (50%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Frame = -3
Query: 551 ISKL*PDISIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 387
+ L P+ S PN S YSP+SP YSP+SP+ S SP YSP+SP +SP S YSP+
Sbjct: 1692 VEPLSPNYSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1751
Query: 386 QPGYSPSSTSQYTP 345
P YSP+S Y+P
Sbjct: 1752 SPNYSPTS-PHYSP 1764
Score = 53.1 bits (126), Expect(2) = 1e-09
Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG------YSPSQPGYSPSSTSQ 354
P+ Y+P+ P YSPSSP + SP+YSPSSP + S G YSPS P Y S +
Sbjct: 1834 PSSPQYNPALPNYSPSSPQYNPTSPNYSPSSPNYVLSNGNIDSPQYSPSSPHYD-QSVAA 1892
Query: 353 YTP 345
Y P
Sbjct: 1893 YHP 1895
Score = 33.5 bits (75), Expect(2) = 1e-09
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T P YSPTSP
Sbjct: 1779 TSPNYSPTSPHYSPTSP 1795
Score = 66.2 bits (160), Expect = 1e-09
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ S PN YSP+SP YSP+SP+ S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1711 PNYSPTSPN---YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSP 1767
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1768 N-YSP 1771
Score = 65.5 bits (158), Expect = 3e-09
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP+ S SP+YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1729 PTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPN-YSP 1785
Score = 64.7 bits (156), Expect = 4e-09
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P + + PN YSP+SP YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1690 PGVEPLSPN---YSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTS- 1745
Query: 359 SQYTP 345
Y+P
Sbjct: 1746 PHYSP 1750
Score = 62.8 bits (151), Expect = 2e-08
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1736 PTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTS-PHYSP 1792
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 14/68 (20%)
Frame = -3
Query: 506 SIYSPSSPTYS-------------PSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSP 369
S YSP+SP YS P+SP +SP+YSP+SP +SP S YSP+ P YSP
Sbjct: 1663 SAYSPTSPVYSGDKDGDSSSPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYSP 1722
Query: 368 SSTSQYTP 345
+S Y+P
Sbjct: 1723 TS-PHYSP 1729
Score = 54.7 bits (130), Expect = 4e-06
Identities = 28/52 (53%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
SP+SP P SP S SP+YSP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1686 SPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTS-PHYSP 1736
[107][TOP]
>UniRef100_Q7Q3C6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7Q3C6_ANOGA
Length = 1878
Score = 68.2 bits (165), Expect(2) = 1e-13
Identities = 35/57 (61%), Positives = 41/57 (71%), Gaps = 4/57 (7%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPG---YSPSSTS 357
PN+S YSPSSP YSP+SP + SP YSPSSP +SP+ GYSPS P YSP+S S
Sbjct: 1815 PNMSSYSPSSPKYSPTSPVYTSSSPTYSPSSPAYSPTPQGYSPSSPASPTYSPTSPS 1871
Score = 32.0 bits (71), Expect(2) = 1e-13
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS T PSYSP+SP
Sbjct: 1773 SPNYSPTSPSYSPSSP 1788
Score = 66.2 bits (160), Expect(2) = 4e-13
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + V+P YSPSSP +SP S YSP+ P YSPSS +Y+P
Sbjct: 1688 PTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPSS-PKYSP 1744
Score = 32.0 bits (71), Expect(2) = 4e-13
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSP+SP
Sbjct: 1654 TSPSYSPTSPSYSPSSP 1670
Score = 69.3 bits (168), Expect(2) = 2e-12
Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSPSSP S SP YSPSSP +SP S YSP+ P YSP+S + +TP T
Sbjct: 1653 PTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPN-FTPVT 1711
Score = 26.9 bits (58), Expect(2) = 2e-12
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 544 NYSXTFPSYSPTSP 503
NYS T PSYSP SP
Sbjct: 1624 NYSPTSPSYSPMSP 1637
Score = 63.2 bits (152), Expect(2) = 6e-12
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
P+ YSP+SP+YSP+SP S SP+++P +P +SPS+ YSP+ P YSP+S S Y+P +
Sbjct: 1681 PSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPS-YSPSS 1739
Score = 31.2 bits (69), Expect(2) = 6e-12
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T PSYSPTSP
Sbjct: 1648 SPGYSPTSPSYSPTSP 1663
Score = 58.5 bits (140), Expect(2) = 3e-11
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 14/71 (19%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQF---------SPSTG-----YSPSQPG 378
P YSP+SP+YSPSSP S SP YSP+SP + SP G YSP+ P
Sbjct: 1723 PTSPHYSPASPSYSPSSPKYSPTSPSYSPTSPSYIGSPHYTPASPQYGQASPNYSPTSPS 1782
Query: 377 YSPSSTSQYTP 345
YSPSS Q++P
Sbjct: 1783 YSPSS-PQHSP 1792
Score = 33.5 bits (75), Expect(2) = 3e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1689 TSPSYSPTSPSYSPTSP 1705
Score = 69.3 bits (168), Expect = 2e-10
Identities = 35/65 (53%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSST 360
P + P YSPSSP+YSP+SP S SP YSP+SP F+P T YSPS P YSP+S
Sbjct: 1667 PSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTS- 1725
Query: 359 SQYTP 345
Y+P
Sbjct: 1726 PHYSP 1730
Score = 60.8 bits (146), Expect(2) = 6e-10
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQ--YTPQTNDK 330
YSP+ +YSPSSP S SP Y+ SSP +SPS+ YSP+ GYSPSS + Y+P +
Sbjct: 1813 YSPNMSSYSPSSPKYSPTSPVYTSSSPTYSPSSPAYSPTPQGYSPSSPASPTYSPTSPSY 1872
Query: 329 DERGKD 312
D+ +D
Sbjct: 1873 DDSNED 1878
Score = 26.6 bits (57), Expect(2) = 6e-10
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP Y P+YSPTSP
Sbjct: 1766 SPQYGQASPNYSPTSP 1781
Score = 63.5 bits (153), Expect(2) = 1e-09
Identities = 31/53 (58%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP +SP+SP +SPS+ YSP+ P YSP+S S Y+P
Sbjct: 1651 YSPTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPS-YSP 1702
Score = 22.7 bits (47), Expect(2) = 1e-09
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SPN +YSPTSP
Sbjct: 1614 SSPNIHSATQNYSPTSP 1630
Score = 60.8 bits (146), Expect(2) = 4e-09
Identities = 32/50 (64%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = -3
Query: 491 SSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+SP YSP+SP S SP YSPSSP FSP S YSPS P YSP+S S Y+P
Sbjct: 1647 ASPGYSPTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPS-YSP 1695
Score = 23.9 bits (50), Expect(2) = 4e-09
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTS 506
TSP YS P YSP S
Sbjct: 1593 TSPGYSPPSPQYSPGS 1608
Score = 64.3 bits (155), Expect = 6e-09
Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ + V P+ YSPSSP YSP+SP+ S SP YSPSSP++SP S YSP+ P Y S
Sbjct: 1705 PNFTPVTPS---YSPSSPNYSPTSPHYSPASPSYSPSSPKYSPTSPSYSPTSPSYIGS-- 1759
Query: 359 SQYTP 345
YTP
Sbjct: 1760 PHYTP 1764
Score = 56.2 bits (134), Expect(2) = 7e-09
Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 13/67 (19%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-------------STGYSPSQPGYSPSST 360
YSP S YSPSSP + +YSP+SP +SP S GYSP+ P YSP+S
Sbjct: 1604 YSPGSSNYSPSSPNIHSATQNYSPTSPSYSPMSPMHPTSASNFASPGYSPTSPSYSPTSP 1663
Query: 359 SQYTPQT 339
S Y+P +
Sbjct: 1664 S-YSPSS 1669
Score = 27.7 bits (60), Expect(2) = 7e-09
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P YSP SP
Sbjct: 1587 SPSYSPTSPGYSPPSP 1602
Score = 51.2 bits (121), Expect(2) = 1e-08
Identities = 29/69 (42%), Positives = 36/69 (52%), Gaps = 17/69 (24%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG-----------------YSPSQPGYS 372
Y+P+SP Y +SP S SP YSPSSPQ SP + YSP+ YS
Sbjct: 1762 YTPASPQYGQASPNYSPTSPSYSPSSPQHSPGSSSNHYSIGSSSYSQTPAPYSPNMSSYS 1821
Query: 371 PSSTSQYTP 345
PSS +Y+P
Sbjct: 1822 PSS-PKYSP 1829
Score = 31.6 bits (70), Expect(2) = 1e-08
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T PSYSPTSP
Sbjct: 1738 SSPKYSPTSPSYSPTSP 1754
Score = 55.8 bits (133), Expect(2) = 3e-08
Identities = 29/56 (51%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQTN 336
YSP+SP YSP SP S S +YSPSSP +T YSP+ P YSP S T +N
Sbjct: 1590 YSPTSPGYSPPSPQYSPGSSNYSPSSPNIHSATQNYSPTSPSYSPMSPMHPTSASN 1645
Score = 25.8 bits (55), Expect(2) = 3e-08
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS + P+Y+P SP
Sbjct: 1568 SPSYSPSSPNYAPNSP 1583
Score = 56.2 bits (134), Expect(2) = 5e-07
Identities = 34/67 (50%), Positives = 41/67 (61%), Gaps = 13/67 (19%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYN-----SGVSPDYSPSSPQFSP-STGYSPSQP-------GYSPSST 360
YSPSSP Y+P+SP S SP YSP SPQ+SP S+ YSPS P YSP+S
Sbjct: 1571 YSPSSPNYAPNSPGGASPSYSPTSPGYSPPSPQYSPGSSNYSPSSPNIHSATQNYSPTSP 1630
Query: 359 SQYTPQT 339
S Y+P +
Sbjct: 1631 S-YSPMS 1636
Score = 21.2 bits (43), Expect(2) = 5e-07
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+ S PSYSP+SP
Sbjct: 1563 SSPSMS---PSYSPSSP 1576
Score = 55.5 bits (132), Expect = 3e-06
Identities = 35/73 (47%), Positives = 42/73 (57%), Gaps = 16/73 (21%)
Frame = -3
Query: 515 PNISIYSPSSP----TYSPSSPYNS-----GVSPDYSPSSPQFS-PSTGYSPSQPGYSPS 366
P++S Y PSSP +YSPSSP + G SP YSP+SP +S PS YSP YSPS
Sbjct: 1555 PSMSPYPPSSPSMSPSYSPSSPNYAPNSPGGASPSYSPTSPGYSPPSPQYSPGSSNYSPS 1614
Query: 365 S------TSQYTP 345
S T Y+P
Sbjct: 1615 SPNIHSATQNYSP 1627
Score = 54.3 bits (129), Expect = 6e-06
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 8/63 (12%)
Frame = -3
Query: 497 SPSSP--TYSPSSPYNSGVSPDYSPSSPQFSP------STGYSPSQPGYSPSSTSQYTPQ 342
SPSSP + SP P + +SP YSPSSP ++P S YSP+ PGYSP S QY+P
Sbjct: 1549 SPSSPGPSMSPYPPSSPSMSPSYSPSSPNYAPNSPGGASPSYSPTSPGYSPPS-PQYSPG 1607
Query: 341 TND 333
+++
Sbjct: 1608 SSN 1610
[108][TOP]
>UniRef100_A8Q5I6 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8Q5I6_MALGO
Length = 1607
Score = 68.6 bits (166), Expect(2) = 1e-13
Identities = 35/61 (57%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1523 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSPSG 1581
Query: 338 N 336
N
Sbjct: 1582 N 1582
Score = 31.6 bits (70), Expect(2) = 1e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1482 TSPQYSPTSPQYSPTSP 1498
Score = 67.0 bits (162), Expect(2) = 3e-13
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1502 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1558
Score = 31.6 bits (70), Expect(2) = 3e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1489 TSPQYSPTSPQYSPTSP 1505
Score = 67.0 bits (162), Expect(2) = 4e-13
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1481 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1537
Score = 31.2 bits (69), Expect(2) = 4e-13
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS T P YSPTSP
Sbjct: 1435 SPNYSPTSPVYSPTSP 1450
Score = 66.6 bits (161), Expect(2) = 7e-13
Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1479 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1530
Score = 30.8 bits (68), Expect(2) = 7e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1441 TSPVYSPTSPAYSPTSP 1457
Score = 58.2 bits (139), Expect(2) = 5e-11
Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 14/65 (21%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--------------GYSPSQPGYSPSST 360
SP+SP YSP+SP S SP YSP+SPQ+SP++ YSP+ P YSP+S
Sbjct: 1432 SPASPNYSPTSPVYSPTSPAYSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTS- 1490
Query: 359 SQYTP 345
QY+P
Sbjct: 1491 PQYSP 1495
Score = 33.1 bits (74), Expect(2) = 5e-11
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPFI 497
TSP+YS T PSYSP+SP I
Sbjct: 1400 TSPSYSPTSPSYSPSSPVI 1418
Score = 59.3 bits (142), Expect(2) = 1e-10
Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = -3
Query: 491 SSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
S P YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1475 SGPKYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1523
Score = 30.8 bits (68), Expect(2) = 1e-10
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1448 TSPAYSPTSPQYSPTSP 1464
Score = 52.8 bits (125), Expect(2) = 5e-09
Identities = 27/51 (52%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--TGYSPSQPGYSP 369
P YSP+SP YSP+SP S SP YSP+SPQ+SPS G S + SP
Sbjct: 1544 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPSGNVGASAASGAASP 1594
Score = 31.6 bits (70), Expect(2) = 5e-09
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1496 TSPQYSPTSPQYSPTSP 1512
Score = 55.1 bits (131), Expect(2) = 7e-08
Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 14/60 (23%)
Frame = -3
Query: 500 YSPSSPTYSPSSPY-------------NSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
YSP+SP+YSPSSP S SP+YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1404 YSPTSPSYSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSPTSPAYSPTSPQYSPTS 1463
Score = 25.4 bits (54), Expect(2) = 7e-08
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y T P+Y+ TSP
Sbjct: 1353 TSPGYVPTSPAYNATSP 1369
Score = 60.1 bits (144), Expect = 1e-07
Identities = 35/78 (44%), Positives = 43/78 (55%), Gaps = 14/78 (17%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYN-------------SGVSPDYSPSSPQFSP-STG 399
P + P YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1440 PTSPVYSPTSPAYSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTSPQ 1499
Query: 398 YSPSQPGYSPSSTSQYTP 345
YSP+ P YSP+S QY+P
Sbjct: 1500 YSPTSPQYSPTS-PQYSP 1516
Score = 55.8 bits (133), Expect(2) = 7e-07
Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 14/66 (21%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSS-------------PQFSP-STGYSPSQPGYSPSS 363
YSP+SP YSP+SP S SP YSP+S P++SP S YSP+ P YSP+S
Sbjct: 1438 YSPTSPVYSPTSPAYSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTS 1497
Query: 362 TSQYTP 345
QY+P
Sbjct: 1498 -PQYSP 1502
Score = 21.2 bits (43), Expect(2) = 7e-07
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 538 SXTFPSYSPTSP 503
S P+YSPTSP
Sbjct: 1432 SPASPNYSPTSP 1443
[109][TOP]
>UniRef100_Q5CUJ2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cryptosporidium parvum
Iowa II RepID=Q5CUJ2_CRYPV
Length = 1902
Score = 67.8 bits (164), Expect(2) = 2e-13
Identities = 30/59 (50%), Positives = 43/59 (72%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQT 339
P YSPSSP YSP+SP S SP+Y+P+SP +SP++ YSP+ P Y+P+S + Y+P +
Sbjct: 1789 PTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPN-YSPSS 1846
Score = 31.6 bits (70), Expect(2) = 2e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P YSPTSP
Sbjct: 1734 TSPHYSPTSPHYSPTSP 1750
Score = 66.6 bits (161), Expect(2) = 4e-13
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP+ S SP YSP+SP +SP S YSPS P YSP+S QY+P
Sbjct: 1754 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTS-PQYSP 1810
Score = 31.6 bits (70), Expect(2) = 4e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P YSPTSP
Sbjct: 1727 TSPHYSPTSPHYSPTSP 1743
Score = 64.3 bits (155), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP+ S SP YSP+SP +SPS+ YSP+ P YSP+S + Y P
Sbjct: 1761 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPN-YNP 1817
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P YSPTSP
Sbjct: 1741 TSPHYSPTSPHYSPTSP 1757
Score = 68.6 bits (166), Expect = 3e-10
Identities = 37/70 (52%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = -3
Query: 551 ISKL*PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGY 375
IS + PD+S P+ YSP+SP YSP+SP+ S SP YSP+SP +SP S YSP+ P Y
Sbjct: 1675 ISNISPDLSPTSPH---YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHY 1731
Query: 374 SPSSTSQYTP 345
SP+S Y+P
Sbjct: 1732 SPTS-PHYSP 1740
Score = 53.9 bits (128), Expect(2) = 2e-09
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 10/67 (14%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSP------YNSGVSPDYSPSSPQFSPST----GYSPSQPGYSPS 366
P YSP+SP Y+P+SP + S SP+Y+P+SP +SPS+ + PGYSPS
Sbjct: 1803 PTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPNYSPSSPNYISNNSGSPGYSPS 1862
Query: 365 STSQYTP 345
S QY P
Sbjct: 1863 S-PQYDP 1868
Score = 31.6 bits (70), Expect(2) = 2e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P YSPTSP
Sbjct: 1748 TSPHYSPTSPHYSPTSP 1764
Score = 63.9 bits (154), Expect = 7e-09
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP YSP+SP+ S SP YSP+SP +SP S YSP+ P YSP+S Y+P +
Sbjct: 1740 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSPSS 1798
Score = 63.5 bits (153), Expect = 1e-08
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP+ S SP YSP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1705 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1761
Score = 63.5 bits (153), Expect = 1e-08
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP+ S SP YSP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1712 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1768
Score = 63.5 bits (153), Expect = 1e-08
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP+ S SP YSP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1719 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1775
Score = 63.5 bits (153), Expect = 1e-08
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP+ S SP YSP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1726 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1782
Score = 63.5 bits (153), Expect = 1e-08
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP+ S SP YSP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1733 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1789
Score = 55.5 bits (132), Expect = 3e-06
Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 11/67 (16%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-----------GYSP 390
P S PN Y+P+SP YSP+S Y S SP+Y+P+SP +SPS+ GYSP
Sbjct: 1806 PQYSPTSPN---YNPASPNYSPTSHY-SPTSPNYNPTSPNYSPSSPNYISNNSGSPGYSP 1861
Query: 389 SQPGYSP 369
S P Y P
Sbjct: 1862 SSPQYDP 1868
[110][TOP]
>UniRef100_Q5CH45 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium hominis
RepID=Q5CH45_CRYHO
Length = 1895
Score = 67.8 bits (164), Expect(2) = 2e-13
Identities = 30/59 (50%), Positives = 43/59 (72%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQT 339
P YSPSSP YSP+SP S SP+Y+P+SP +SP++ YSP+ P Y+P+S + Y+P +
Sbjct: 1782 PTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPN-YSPSS 1839
Score = 31.6 bits (70), Expect(2) = 2e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P YSPTSP
Sbjct: 1727 TSPHYSPTSPHYSPTSP 1743
Score = 66.6 bits (161), Expect(2) = 4e-13
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP+ S SP YSP+SP +SP S YSPS P YSP+S QY+P
Sbjct: 1747 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTS-PQYSP 1803
Score = 31.6 bits (70), Expect(2) = 4e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P YSPTSP
Sbjct: 1720 TSPHYSPTSPHYSPTSP 1736
Score = 64.3 bits (155), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP+ S SP YSP+SP +SPS+ YSP+ P YSP+S + Y P
Sbjct: 1754 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPN-YNP 1810
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P YSPTSP
Sbjct: 1734 TSPHYSPTSPHYSPTSP 1750
Score = 68.6 bits (166), Expect = 3e-10
Identities = 37/70 (52%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = -3
Query: 551 ISKL*PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGY 375
IS + PD+S P+ YSP+SP YSP+SP+ S SP YSP+SP +SP S YSP+ P Y
Sbjct: 1668 ISNISPDLSPTSPH---YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHY 1724
Query: 374 SPSSTSQYTP 345
SP+S Y+P
Sbjct: 1725 SPTS-PHYSP 1733
Score = 53.9 bits (128), Expect(2) = 2e-09
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 10/67 (14%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSP------YNSGVSPDYSPSSPQFSPST----GYSPSQPGYSPS 366
P YSP+SP Y+P+SP + S SP+Y+P+SP +SPS+ + PGYSPS
Sbjct: 1796 PTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPNYSPSSPNYISNNSGSPGYSPS 1855
Query: 365 STSQYTP 345
S QY P
Sbjct: 1856 S-PQYDP 1861
Score = 31.6 bits (70), Expect(2) = 2e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P YSPTSP
Sbjct: 1741 TSPHYSPTSPHYSPTSP 1757
Score = 63.9 bits (154), Expect = 7e-09
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP YSP+SP+ S SP YSP+SP +SP S YSP+ P YSP+S Y+P +
Sbjct: 1733 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSPSS 1791
Score = 63.5 bits (153), Expect = 1e-08
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP+ S SP YSP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1698 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1754
Score = 63.5 bits (153), Expect = 1e-08
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP+ S SP YSP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1705 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1761
Score = 63.5 bits (153), Expect = 1e-08
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP+ S SP YSP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1712 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1768
Score = 63.5 bits (153), Expect = 1e-08
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP+ S SP YSP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1719 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1775
Score = 63.5 bits (153), Expect = 1e-08
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP+ S SP YSP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1726 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1782
Score = 55.5 bits (132), Expect = 3e-06
Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 11/67 (16%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-----------GYSP 390
P S PN Y+P+SP YSP+S Y S SP+Y+P+SP +SPS+ GYSP
Sbjct: 1799 PQYSPTSPN---YNPASPNYSPTSHY-SPTSPNYNPTSPNYSPSSPNYISNNSGSPGYSP 1854
Query: 389 SQPGYSP 369
S P Y P
Sbjct: 1855 SSPQYDP 1861
[111][TOP]
>UniRef100_A4S3M0 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S3M0_OSTLU
Length = 1646
Score = 68.2 bits (165), Expect(2) = 2e-13
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P+
Sbjct: 1581 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSPKE 1639
Query: 338 NDKDE 324
+++E
Sbjct: 1640 EEENE 1644
Score = 31.2 bits (69), Expect(2) = 2e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1526 TSPAYSPTSPAYSPTSP 1542
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1546 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1602
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1567 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1623
Score = 31.2 bits (69), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1533 TSPAYSPTSPAYSPTSP 1549
Score = 31.2 bits (69), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1540 TSPAYSPTSPAYSPTSP 1556
Score = 64.7 bits (156), Expect = 4e-09
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1525 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1581
Score = 63.5 bits (153), Expect = 1e-08
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1523 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1574
Score = 53.5 bits (127), Expect(2) = 2e-07
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP YSP +SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1532 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1591
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1592 A-YSP 1595
Score = 25.8 bits (55), Expect(2) = 2e-07
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
YS T P+YSPTSP
Sbjct: 1523 YSPTSPAYSPTSP 1535
Score = 53.5 bits (127), Expect = 1e-05
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP YSP +SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1553 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1612
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1613 A-YSP 1616
[112][TOP]
>UniRef100_Q9C428 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharis
macrandra RepID=Q9C428_9FUNG
Length = 1603
Score = 65.9 bits (159), Expect(2) = 3e-13
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1547 PTSPSYTPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1603
Score = 33.1 bits (74), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1534 TSPGYSPTSPSYSPTSP 1550
Score = 65.9 bits (159), Expect(2) = 3e-10
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+Y+P+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1540 PTSPSYSPTSPSYTPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1596
Score = 22.7 bits (47), Expect(2) = 3e-10
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1
Query: 538 SXTFPSYSPTSP 503
S T P YSPTSP
Sbjct: 1532 SPTSPGYSPTSP 1543
Score = 66.6 bits (161), Expect = 1e-09
Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Frame = -3
Query: 524 IVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYT 348
++ P YSP+SP+YSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+
Sbjct: 1530 VISPTSPGYSPTSPSYSPTSPSYTPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YS 1588
Query: 347 P 345
P
Sbjct: 1589 P 1589
[113][TOP]
>UniRef100_B7G9I2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G9I2_PHATR
Length = 1706
Score = 67.4 bits (163), Expect(2) = 3e-13
Identities = 36/67 (53%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1638 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSPSG 1696
Query: 338 ND--KDE 324
D KDE
Sbjct: 1697 GDDKKDE 1703
Score = 31.2 bits (69), Expect(2) = 3e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1583 TSPAYSPTSPAYSPTSP 1599
Score = 65.5 bits (158), Expect(2) = 1e-12
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P +
Sbjct: 1631 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSPTS 1689
Query: 338 NDKDERGKD 312
G D
Sbjct: 1690 PAYSPSGGD 1698
Score = 64.7 bits (156), Expect(2) = 1e-12
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1547 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1603
Score = 32.0 bits (71), Expect(2) = 1e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1520 TSPQYSPTSPAYSPTSP 1536
Score = 31.2 bits (69), Expect(2) = 1e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1576 TSPAYSPTSPAYSPTSP 1592
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1568 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1624
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1589 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1645
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1610 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1666
Score = 31.2 bits (69), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1527 TSPAYSPTSPAYSPTSP 1543
Score = 31.2 bits (69), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1534 TSPAYSPTSPAYSPTSP 1550
Score = 31.2 bits (69), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1555 TSPAYSPTSPAYSPTSP 1571
Score = 63.5 bits (153), Expect(2) = 4e-12
Identities = 31/62 (50%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSPS +
Sbjct: 1645 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPSGGDDKKDEM 1704
Query: 338 ND 333
D
Sbjct: 1705 ED 1706
Score = 31.2 bits (69), Expect(2) = 4e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1590 TSPAYSPTSPAYSPTSP 1606
Score = 64.7 bits (156), Expect(2) = 1e-11
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1526 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1582
Score = 28.9 bits (63), Expect(2) = 1e-11
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSPTSP
Sbjct: 1514 SPAYSPTSPQYSPTSP 1529
Score = 53.5 bits (127), Expect(2) = 4e-09
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP YSP +SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1554 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1613
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1614 A-YSP 1617
Score = 53.5 bits (127), Expect(2) = 4e-09
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP YSP +SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1575 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1634
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1635 A-YSP 1638
Score = 53.5 bits (127), Expect(2) = 4e-09
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP YSP +SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1596 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1655
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1656 A-YSP 1659
Score = 53.5 bits (127), Expect(2) = 4e-09
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP YSP +SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1617 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1676
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1677 A-YSP 1680
Score = 31.2 bits (69), Expect(2) = 4e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1541 TSPAYSPTSPAYSPTSP 1557
Score = 31.2 bits (69), Expect(2) = 4e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1548 TSPAYSPTSPAYSPTSP 1564
Score = 31.2 bits (69), Expect(2) = 4e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1562 TSPAYSPTSPAYSPTSP 1578
Score = 31.2 bits (69), Expect(2) = 4e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1569 TSPAYSPTSPAYSPTSP 1585
Score = 63.9 bits (154), Expect = 7e-09
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1519 PTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1575
Score = 63.2 bits (152), Expect = 1e-08
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1517 YSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1568
Score = 57.0 bits (136), Expect = 9e-07
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -3
Query: 518 FPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
F + S + SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1504 FASGSYGAGDSPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1561
Score = 53.5 bits (127), Expect = 1e-05
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP YSP +SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1533 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1592
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1593 A-YSP 1596
[114][TOP]
>UniRef100_C1EA31 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1EA31_9CHLO
Length = 1720
Score = 67.0 bits (162), Expect(2) = 4e-13
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1634 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1690
Score = 31.2 bits (69), Expect(2) = 4e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1579 TSPAYSPTSPAYSPTSP 1595
Score = 66.2 bits (160), Expect(2) = 7e-13
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1613 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS-PQYSP 1669
Score = 31.2 bits (69), Expect(2) = 7e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1558 TSPAYSPTSPAYSPTSP 1574
Score = 65.1 bits (157), Expect(2) = 2e-12
Identities = 31/52 (59%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S
Sbjct: 1641 PTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS 1692
Score = 31.2 bits (69), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1586 TSPAYSPTSPAYSPTSP 1602
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1550 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1606
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1571 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1627
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1592 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1648
Score = 31.2 bits (69), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1530 TSPAYSPTSPAYSPTSP 1546
Score = 31.2 bits (69), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1537 TSPAYSPTSPAYSPTSP 1553
Score = 31.2 bits (69), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1544 TSPAYSPTSPAYSPTSP 1560
Score = 60.1 bits (144), Expect(2) = 5e-11
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 8/67 (11%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS-------ST 360
P YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP+ G S + ++
Sbjct: 1648 PTSPAYSPTSPAYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSLGLSDADAPTRSPTS 1707
Query: 359 SQYTPQT 339
QY+P T
Sbjct: 1708 PQYSPST 1714
Score = 31.2 bits (69), Expect(2) = 5e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1593 TSPAYSPTSPAYSPTSP 1609
Score = 53.5 bits (127), Expect(2) = 4e-09
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP YSP +SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1578 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1637
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1638 A-YSP 1641
Score = 53.5 bits (127), Expect(2) = 4e-09
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP YSP +SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1599 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1658
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1659 A-YSP 1662
Score = 31.2 bits (69), Expect(2) = 4e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1551 TSPAYSPTSPAYSPTSP 1567
Score = 31.2 bits (69), Expect(2) = 4e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1565 TSPAYSPTSPAYSPTSP 1581
Score = 64.7 bits (156), Expect = 4e-09
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1529 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1585
Score = 53.5 bits (127), Expect(2) = 9e-09
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP YSP +SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1536 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1595
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1596 A-YSP 1599
Score = 30.0 bits (66), Expect(2) = 9e-09
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P+YSPTSP
Sbjct: 1524 SPGYSPTSPAYSPTSP 1539
Score = 63.5 bits (153), Expect = 1e-08
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1527 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1578
Score = 55.5 bits (132), Expect = 3e-06
Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -3
Query: 488 SPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1524 SPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1571
Score = 53.5 bits (127), Expect = 1e-05
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP YSP +SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1557 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1616
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1617 A-YSP 1620
[115][TOP]
>UniRef100_C5Y387 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5Y387_SORBI
Length = 1874
Score = 67.0 bits (162), Expect(2) = 6e-13
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+S +YSP+SP+ S SP YSPSSP +SP S GYSP+ PGYSP+S
Sbjct: 1696 PTSPSYSPASLSYSPTSPFYSPTSPSYSPSSPSYSPTSPTYSPTSLGYSPTSPGYSPTSP 1755
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1756 T-YSP 1759
Score = 30.8 bits (68), Expect(2) = 6e-13
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
TSP+YS SYSPTSPF
Sbjct: 1655 TSPSYSPASASYSPTSPF 1672
Score = 58.5 bits (140), Expect(2) = 8e-11
Identities = 32/65 (49%), Positives = 37/65 (56%), Gaps = 16/65 (24%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNS----------------GVSPDYSPSSPQFSPSTGYSPSQPGYSP 369
YSP+SPTYSP+SP S SPDYSP+SP FSP+ SP+ YSP
Sbjct: 1800 YSPTSPTYSPTSPSYSLPSLSYSPNRPTDDSGRPSPDYSPTSPNFSPNRSDSPTAADYSP 1859
Query: 368 SSTSQ 354
SST Q
Sbjct: 1860 SSTGQ 1864
Score = 32.0 bits (71), Expect(2) = 8e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1746 TSPGYSPTSPTYSPTSP 1762
Score = 58.2 bits (139), Expect(2) = 3e-10
Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P+ YSP+SPTYSP+S S SP YSP+SP +SP S YSP+ P Y+ S T + T
Sbjct: 1724 PSSPSYSPTSPTYSPTSLGYSPTSPGYSPTSPTYSPTSPNYSPTSPSYNLSYTEYNSSNT 1783
Score = 30.4 bits (67), Expect(2) = 3e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSP+SP
Sbjct: 1711 TSPFYSPTSPSYSPSSP 1727
Score = 61.2 bits (147), Expect(2) = 6e-10
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+S +YSP+SP+ S SP YSP+S +SP S YSP+ P YSPSS S Y+P
Sbjct: 1675 PTSPSYSPASLSYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPSSPS-YSP 1731
Score = 26.2 bits (56), Expect(2) = 6e-10
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
S +YS T P YSPTSP
Sbjct: 1663 SASYSPTSPFYSPTSP 1678
Score = 53.1 bits (126), Expect(2) = 3e-09
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 23/86 (26%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQF-----------------------SPSTGYSP 390
YSP+SP YSP+SP S SP+YSP+SP + S + YSP
Sbjct: 1743 YSPTSPGYSPTSPTYSPTSPNYSPTSPSYNLSYTEYNSSNTYSPTRPRITLDSQAPDYSP 1802
Query: 389 SQPGYSPSSTSQYTPQTNDKDERGKD 312
+ P YSP+S S P + R D
Sbjct: 1803 TSPTYSPTSPSYSLPSLSYSPNRPTD 1828
Score = 32.0 bits (71), Expect(2) = 3e-09
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + PSYSPTSP
Sbjct: 1718 TSPSYSPSSPSYSPTSP 1734
Score = 60.1 bits (144), Expect(2) = 7e-09
Identities = 30/53 (56%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+S +YSP+SP+ S SP YSP+S +SP S YSP+ P YSP+S S Y+P
Sbjct: 1659 YSPASASYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPASLS-YSP 1710
Score = 23.9 bits (50), Expect(2) = 7e-09
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
T+P Y+ P YSPT+P
Sbjct: 1602 TTPVYTPMSPVYSPTTP 1618
Score = 62.0 bits (149), Expect(2) = 1e-08
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP+YSP+S S SP YSP+SP +SP S YSP+ P YSP+S S Y+P +
Sbjct: 1668 PTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPS-YSPSS 1726
Score = 21.2 bits (43), Expect(2) = 1e-08
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTS 506
S Y+ + PS+SPTS
Sbjct: 1640 SSRYNPSSPSFSPTS 1654
Score = 58.5 bits (140), Expect = 3e-07
Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 10/74 (13%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPT---------YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 387
P + + PN S Y+PSSP+ YSP+S S SP YSP+SP +SP S YSP+
Sbjct: 1631 PIYNPISPNSSRYNPSSPSFSPTSTSPSYSPASASYSPTSPFYSPTSPSYSPASLSYSPT 1690
Query: 386 QPGYSPSSTSQYTP 345
P YSP+S S Y+P
Sbjct: 1691 SPFYSPTSPS-YSP 1703
Score = 54.3 bits (129), Expect = 6e-06
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP----STGYSPSQPGYSP 369
P + P +Y+P SP YSP++P +S + YS +SP ++P S+ Y+PS P +SP
Sbjct: 1594 PVSPVYSPTTPVYTPMSPVYSPTTPVSSQIQ-SYSSASPIYNPISPNSSRYNPSSPSFSP 1652
Query: 368 SSTS-QYTP 345
+STS Y+P
Sbjct: 1653 TSTSPSYSP 1661
Score = 49.3 bits (116), Expect(2) = 9e-06
Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Frame = -3
Query: 521 VFPNISIYSPSSPTYSPSSPYNSGV---SPDYSP--SSPQFSP-STGYSPSQPGYSPSST 360
V I YS +SP Y+P SP +S SP +SP +SP +SP S YSP+ P YSP+S
Sbjct: 1619 VSSQIQSYSSASPIYNPISPNSSRYNPSSPSFSPTSTSPSYSPASASYSPTSPFYSPTSP 1678
Query: 359 SQYTP 345
S Y+P
Sbjct: 1679 S-YSP 1682
Score = 23.9 bits (50), Expect(2) = 9e-06
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TS +Y+ P YSPT+P
Sbjct: 1588 TSTSYTPVSPVYSPTTP 1604
[116][TOP]
>UniRef100_Q9BMP3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
RepID=Q9BMP3_MONBE
Length = 1743
Score = 67.4 bits (163), Expect(2) = 6e-13
Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSPSSP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1620 YSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPS-YSP 1671
Score = 30.4 bits (67), Expect(2) = 6e-13
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T PSYSPTSP
Sbjct: 1588 SPAYSPTSPSYSPTSP 1603
Score = 66.2 bits (160), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ YSP+SP YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1622 PSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPN-YSP 1678
Score = 30.0 bits (66), Expect(2) = 2e-12
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSP+SP
Sbjct: 1609 TSPGYSPTSPGYSPSSP 1625
Score = 60.5 bits (145), Expect(2) = 2e-10
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 9/66 (13%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGV-SPDYSPSSPQFSPST--------GYSPSQPGYSPSS 363
P YSP+SP+YSP+SP G SP YSP+SP +SPS+ YSP+ P YSP+S
Sbjct: 1543 PTSPHYSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTS 1602
Query: 362 TSQYTP 345
+ +P
Sbjct: 1603 PNVKSP 1608
Score = 28.9 bits (63), Expect(2) = 2e-10
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P SPTSP
Sbjct: 1515 TSPSYSPTSPGMSPTSP 1531
Score = 69.3 bits (168), Expect = 2e-10
Identities = 39/78 (50%), Positives = 47/78 (60%), Gaps = 14/78 (17%)
Frame = -3
Query: 536 PDISIVFPNIS-----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP---------STG 399
P S PN+ YSP+SP+YSPSSP + SP YSP+SP +SP S G
Sbjct: 1553 PSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPG 1612
Query: 398 YSPSQPGYSPSSTSQYTP 345
YSP+ PGYSPSS S Y+P
Sbjct: 1613 YSPTSPGYSPSSPS-YSP 1629
Score = 67.8 bits (164), Expect = 5e-10
Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 13/77 (16%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP---------STGY 396
P S PN S YSP+SP YSP+SP S SP+YSP+SP +SP S GY
Sbjct: 1667 PSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGY 1726
Query: 395 SPSQPGYSPSSTSQYTP 345
SP+ PGYSP+S Y+P
Sbjct: 1727 SPTSPGYSPTSPG-YSP 1742
Score = 67.0 bits (162), Expect = 9e-10
Identities = 38/79 (48%), Positives = 46/79 (58%), Gaps = 12/79 (15%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYS 393
P S PN S YSP+SP YSP+SP S SP+YSP+SP +SP S YS
Sbjct: 1639 PSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYS 1698
Query: 392 PSQPGYSPSSTSQYTPQTN 336
P+ P YSP+S S Y+P N
Sbjct: 1699 PTSPNYSPTSPS-YSPTAN 1716
Score = 66.6 bits (161), Expect = 1e-09
Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 6/70 (8%)
Frame = -3
Query: 536 PDISIVFPNISI-----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGY 375
P S PN+ YSP+SP YSPSSP S SP+YSP+SP +SP S YSP+ P Y
Sbjct: 1596 PSYSPTSPNVKSPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSY 1655
Query: 374 SPSSTSQYTP 345
SP+S + Y+P
Sbjct: 1656 SPTSPN-YSP 1664
Score = 66.6 bits (161), Expect = 1e-09
Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP YSP+SP S SP+YSP+SP +SP S YSP+ P YS
Sbjct: 1625 PSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYS 1684
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1685 PTSPN-YSP 1692
Score = 51.2 bits (121), Expect(2) = 3e-07
Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Frame = -3
Query: 500 YSPSSPT-YSPSSPYNSGVSPDYSPSSPQF--SPSTGYSPSQPGYSPSS 363
+SP+SP ++P+SP+ S SP YSP+SP + S YSP+ P YSPSS
Sbjct: 1533 FSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSS 1581
Score = 26.9 bits (58), Expect(2) = 3e-07
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
YS T PSYSPTSP
Sbjct: 1512 YSPTSPSYSPTSP 1524
Score = 55.8 bits (133), Expect = 2e-06
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Frame = -3
Query: 500 YSPSSPT-YSPSSPYNSGVSPDYSPSSPQFSPST--GYSPSQPGYSPSSTSQYTP 345
Y PSSP YSP+SP S SP SP+SP FSP++ G++P+ P YSP+S S Y+P
Sbjct: 1504 YDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPS-YSP 1557
Score = 55.8 bits (133), Expect = 2e-06
Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQ-FSP-STGYSPSQPGYSPSS 363
YSP+SP+YSP+SP S SP +SP+SP F+P S YSP+ P YSP+S
Sbjct: 1512 YSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTS 1559
[117][TOP]
>UniRef100_A9V5W6 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
RepID=A9V5W6_MONBE
Length = 1307
Score = 67.4 bits (163), Expect(2) = 6e-13
Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSPSSP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1184 YSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPS-YSP 1235
Score = 30.4 bits (67), Expect(2) = 6e-13
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T PSYSPTSP
Sbjct: 1152 SPAYSPTSPSYSPTSP 1167
Score = 66.2 bits (160), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ YSP+SP YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1186 PSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPN-YSP 1242
Score = 30.0 bits (66), Expect(2) = 2e-12
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSP+SP
Sbjct: 1173 TSPGYSPTSPGYSPSSP 1189
Score = 60.5 bits (145), Expect(2) = 2e-10
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 9/66 (13%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGV-SPDYSPSSPQFSPST--------GYSPSQPGYSPSS 363
P YSP+SP+YSP+SP G SP YSP+SP +SPS+ YSP+ P YSP+S
Sbjct: 1107 PTSPHYSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTS 1166
Query: 362 TSQYTP 345
+ +P
Sbjct: 1167 PNVKSP 1172
Score = 28.9 bits (63), Expect(2) = 2e-10
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P SPTSP
Sbjct: 1079 TSPSYSPTSPGMSPTSP 1095
Score = 69.3 bits (168), Expect = 2e-10
Identities = 39/78 (50%), Positives = 47/78 (60%), Gaps = 14/78 (17%)
Frame = -3
Query: 536 PDISIVFPNIS-----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP---------STG 399
P S PN+ YSP+SP+YSPSSP + SP YSP+SP +SP S G
Sbjct: 1117 PSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPG 1176
Query: 398 YSPSQPGYSPSSTSQYTP 345
YSP+ PGYSPSS S Y+P
Sbjct: 1177 YSPTSPGYSPSSPS-YSP 1193
Score = 67.8 bits (164), Expect = 5e-10
Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 13/77 (16%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP---------STGY 396
P S PN S YSP+SP YSP+SP S SP+YSP+SP +SP S GY
Sbjct: 1231 PSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGY 1290
Query: 395 SPSQPGYSPSSTSQYTP 345
SP+ PGYSP+S Y+P
Sbjct: 1291 SPTSPGYSPTSPG-YSP 1306
Score = 67.0 bits (162), Expect = 9e-10
Identities = 38/79 (48%), Positives = 46/79 (58%), Gaps = 12/79 (15%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYS 393
P S PN S YSP+SP YSP+SP S SP+YSP+SP +SP S YS
Sbjct: 1203 PSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYS 1262
Query: 392 PSQPGYSPSSTSQYTPQTN 336
P+ P YSP+S S Y+P N
Sbjct: 1263 PTSPNYSPTSPS-YSPTAN 1280
Score = 66.6 bits (161), Expect = 1e-09
Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 6/70 (8%)
Frame = -3
Query: 536 PDISIVFPNISI-----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGY 375
P S PN+ YSP+SP YSPSSP S SP+YSP+SP +SP S YSP+ P Y
Sbjct: 1160 PSYSPTSPNVKSPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSY 1219
Query: 374 SPSSTSQYTP 345
SP+S + Y+P
Sbjct: 1220 SPTSPN-YSP 1228
Score = 66.6 bits (161), Expect = 1e-09
Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNIS----IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P S PN S YSP+SP YSP+SP S SP+YSP+SP +SP S YSP+ P YS
Sbjct: 1189 PSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYS 1248
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1249 PTSPN-YSP 1256
Score = 51.2 bits (121), Expect(2) = 3e-07
Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Frame = -3
Query: 500 YSPSSPT-YSPSSPYNSGVSPDYSPSSPQF--SPSTGYSPSQPGYSPSS 363
+SP+SP ++P+SP+ S SP YSP+SP + S YSP+ P YSPSS
Sbjct: 1097 FSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSS 1145
Score = 26.9 bits (58), Expect(2) = 3e-07
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
YS T PSYSPTSP
Sbjct: 1076 YSPTSPSYSPTSP 1088
Score = 55.8 bits (133), Expect = 2e-06
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Frame = -3
Query: 500 YSPSSPT-YSPSSPYNSGVSPDYSPSSPQFSPST--GYSPSQPGYSPSSTSQYTP 345
Y PSSP YSP+SP S SP SP+SP FSP++ G++P+ P YSP+S S Y+P
Sbjct: 1068 YDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPS-YSP 1121
Score = 55.8 bits (133), Expect = 2e-06
Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQ-FSP-STGYSPSQPGYSPSS 363
YSP+SP+YSP+SP S SP +SP+SP F+P S YSP+ P YSP+S
Sbjct: 1076 YSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTS 1123
[118][TOP]
>UniRef100_Q4QZ03 DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum tuberosum
RepID=Q4QZ03_SOLTU
Length = 361
Score = 65.9 bits (159), Expect(2) = 8e-13
Identities = 31/52 (59%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P YSPSSP YSP+SP S SP YSP+SP +SP S+ YSP+ P YSP+S
Sbjct: 160 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTS 211
Score = 65.1 bits (157), Expect(2) = 8e-13
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P S YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+ S Y+P
Sbjct: 195 PTSSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPTSPAYSPTLPSYSPTLPS-YSP 251
Score = 32.3 bits (72), Expect(2) = 8e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 175 TSPAYSPTSPSYSPTSP 191
Score = 31.6 bits (70), Expect(2) = 8e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 140 TSPGYSPTSPGYSPTSP 156
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/53 (62%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SPTYSPSSP S SP YSP+SP +SP S YSP+ YSP+S S Y+P
Sbjct: 158 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPS-YSP 209
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 147 TSPGYSPTSPGYSPTSP 163
Score = 62.4 bits (150), Expect(2) = 2e-12
Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 5/64 (7%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS-----TSQY 351
P YSP+SP YSP+SP S SP YSP+SP ++PS YSPS YSP+S +S Y
Sbjct: 272 PTFPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSARYSPSL-AYSPTSPKLSPSSPY 330
Query: 350 TPQT 339
+P +
Sbjct: 331 SPSS 334
Score = 33.5 bits (75), Expect(2) = 2e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 252 TSPSYSPTSPSYSPTSP 268
Score = 60.1 bits (144), Expect(2) = 3e-12
Identities = 30/46 (65%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS 366
YSP+SP SPSSPY+ SP YSP+SP +SP S YSPS P YSPS
Sbjct: 317 YSPTSPKLSPSSPYSPS-SPSYSPTSPSYSPTSPSYSPSSPTYSPS 361
Score = 35.4 bits (80), Expect(2) = 3e-12
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS TFP+YSPTSP
Sbjct: 266 TSPSYSPTFPAYSPTSP 282
Score = 67.4 bits (163), Expect(2) = 6e-12
Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P+ YSP+SP YSP+SP S SP YSP+SP +SPS+ GYSP+ P YSP+S S Y+P
Sbjct: 132 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS-YSP 188
Score = 26.9 bits (58), Expect(2) = 6e-12
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS + P YSP+SP
Sbjct: 119 SSPGYSPSSPGYSPSSP 135
Score = 62.0 bits (149), Expect(2) = 1e-11
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--------GYSPSQPGYSPSST 360
P YSP+ P+YSP+ P S SP YSP+SP +SP++ YSP+ PGYSP+S
Sbjct: 230 PTSPAYSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSP 289
Query: 359 SQYTP 345
S Y+P
Sbjct: 290 S-YSP 293
Score = 31.2 bits (69), Expect(2) = 1e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P YSPTSP
Sbjct: 203 TSPSYSPTSPIYSPTSP 219
Score = 61.6 bits (148), Expect(2) = 3e-11
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+S S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 181 PTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPTSPA-YSP 237
Score = 30.4 bits (67), Expect(2) = 3e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSP+SP
Sbjct: 154 TSPGYSPTSPTYSPSSP 170
Score = 58.9 bits (141), Expect(2) = 1e-10
Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+ P S P YSP+SP +SP S YSP+ P YSP+ + Y+P
Sbjct: 223 PTSPAYSPTSPAYSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFPA-YSP 279
Score = 30.8 bits (68), Expect(2) = 1e-10
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTS 506
TSP+YS T PSYSPTS
Sbjct: 182 TSPSYSPTSPSYSPTS 197
Score = 68.9 bits (167), Expect = 2e-10
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P + P + YSP+SP+YSP+SP S SP YSP+ P +SP S GYSP+ P YSP+S
Sbjct: 237 PTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPTSP 296
Query: 359 SQYTP 345
S Y+P
Sbjct: 297 S-YSP 300
Score = 55.5 bits (132), Expect(2) = 7e-10
Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 12/69 (17%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGV-----------SPDYSPSSPQFSP-STGYSPSQPGYS 372
P YSP+SP+Y+PS+ Y+ + S YSPSSP +SP S YSP+ P YS
Sbjct: 293 PTSPSYSPTSPSYNPSARYSPSLAYSPTSPKLSPSSPYSPSSPSYSPTSPSYSPTSPSYS 352
Query: 371 PSSTSQYTP 345
PSS + Y+P
Sbjct: 353 PSSPT-YSP 360
Score = 32.0 bits (71), Expect(2) = 7e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
T P+YS T PSYSPTSP
Sbjct: 238 TLPSYSPTLPSYSPTSP 254
Score = 67.0 bits (162), Expect = 9e-10
Identities = 35/53 (66%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSPSSP YSPSSP S SP YSP+SP +SP S GYSP+ P YSPSS Y+P
Sbjct: 123 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSP 174
Score = 66.6 bits (161), Expect = 1e-09
Identities = 35/58 (60%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ YSPSSP YSP+SP S SP YSP+SP +SP S YSPS PGYSP+S + Y+P
Sbjct: 125 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 181
Score = 55.1 bits (131), Expect(2) = 3e-09
Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 7/59 (11%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP---GYSPS---STSQYTP 345
YSP+SP YSP+SP S SP YSPSSP +SP S YSP+ P SPS ++S Y+P
Sbjct: 144 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSP 202
Score = 30.0 bits (66), Expect(2) = 3e-09
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T P YSPTSP
Sbjct: 133 SSPGYSPTSPGYSPTSP 149
Score = 64.3 bits (155), Expect = 6e-09
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSST 360
P S P YSP+SP YSP+SP S SP YSP+SP +SP+ YSP+ P YSP+S
Sbjct: 195 PTSSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPTSPAYSPTLPSYSPTLPSYSPTSP 254
Query: 359 SQYTP 345
S Y+P
Sbjct: 255 S-YSP 258
Score = 53.5 bits (127), Expect(2) = 7e-09
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQP-------GYSPSST 360
P IYSP+SP YSP+SP S SP YSP+ P +SP+ YSP+ P YSP+S
Sbjct: 209 PTSPIYSPTSPAYSPTSPAYSPTSPAYSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSP 268
Query: 359 SQYTP 345
S Y+P
Sbjct: 269 S-YSP 272
Score = 30.4 bits (67), Expect(2) = 7e-09
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS T P+YSPTSP
Sbjct: 168 SSPGYSPTSPAYSPTSP 184
Score = 63.5 bits (153), Expect = 1e-08
Identities = 38/80 (47%), Positives = 46/80 (57%), Gaps = 16/80 (20%)
Frame = -3
Query: 536 PDISIVFPNISI----YSPSSPTYSPSSPYNSGVSPD------------YSPSSPQFSPS 405
P S FP S YSP+SP+YSP+SP S SP YSP+SP+ SPS
Sbjct: 268 PSYSPTFPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSARYSPSLAYSPTSPKLSPS 327
Query: 404 TGYSPSQPGYSPSSTSQYTP 345
+ YSPS P YSP+S S Y+P
Sbjct: 328 SPYSPSSPSYSPTSPS-YSP 346
Score = 62.8 bits (151), Expect = 2e-08
Identities = 34/56 (60%), Positives = 42/56 (75%), Gaps = 2/56 (3%)
Frame = -3
Query: 500 YSP-SSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
+SP SSP YSPSSP S SP YSP+SP +SP S GYSP+ PGYSP+S + Y+P +
Sbjct: 115 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT-YSPSS 169
Score = 52.4 bits (124), Expect(2) = 6e-08
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = -3
Query: 506 SIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 405
S YSPSSP+YSP+SP S SP YSPSSP +SPS
Sbjct: 328 SPYSPSSPSYSPTSPSYSPTSPSYSPSSPTYSPS 361
Score = 28.5 bits (62), Expect(2) = 6e-08
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
T P YS T P YSPTSP
Sbjct: 273 TFPAYSPTSPGYSPTSP 289
Score = 51.2 bits (121), Expect(2) = 1e-07
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSP---DYSPSSPQFSPSTG-YSPSQPGYSPSST 360
P+ YSP+SP YSP SP + SP YSP+SP +SP++ YSP+ P YSP+S
Sbjct: 167 PSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPTSP 226
Query: 359 SQYTP 345
+ Y+P
Sbjct: 227 A-YSP 230
Score = 28.5 bits (62), Expect(2) = 1e-07
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS + P YSPTSP
Sbjct: 126 SSPGYSPSSPGYSPTSP 142
[119][TOP]
>UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000E12351
Length = 2085
Score = 63.5 bits (153), Expect(2) = 9e-13
Identities = 36/83 (43%), Positives = 45/83 (54%), Gaps = 15/83 (18%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-------GYSPSQP-------- 381
P S YSP+SP YSP+SP S SP YSPSSP ++PS+ YSPS P
Sbjct: 1738 PTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSP 1797
Query: 380 GYSPSSTSQYTPQTNDKDERGKD 312
YSP+S S P + RG++
Sbjct: 1798 TYSPTSPSYSQPSPSYSPTRGEE 1820
Score = 33.5 bits (75), Expect(2) = 9e-13
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1704 TSPSYSPTSPSYSPTSP 1720
Score = 67.0 bits (162), Expect(2) = 3e-12
Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 8/67 (11%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S
Sbjct: 1703 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSP 1762
Query: 359 SQYTPQT 339
S Y+P +
Sbjct: 1763 S-YSPSS 1768
Score = 28.5 bits (62), Expect(2) = 3e-12
Identities = 14/19 (73%), Positives = 15/19 (78%), Gaps = 2/19 (10%)
Frame = -1
Query: 553 TSPNYSX--TFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1663 TSPSYSYSPTSPSYSPTSP 1681
Score = 58.5 bits (140), Expect(2) = 1e-09
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 13/70 (18%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQF------------SPSTGYSPSQPGYS 372
P +YSP+SP Y+P+S S SP Y+P+SP + SPS YSP+ P YS
Sbjct: 1634 PTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYS 1693
Query: 371 PSSTS-QYTP 345
P+S S Y+P
Sbjct: 1694 PTSPSYNYSP 1703
Score = 56.2 bits (134), Expect(2) = 1e-09
Identities = 33/64 (51%), Positives = 41/64 (64%), Gaps = 7/64 (10%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP---GYSPS---STS 357
P YSP+SP+YSP+SP S S YSP+SP +SP S GYSP+ P SPS S+
Sbjct: 1717 PTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSV 1776
Query: 356 QYTP 345
+YTP
Sbjct: 1777 KYTP 1780
Score = 30.4 bits (67), Expect(2) = 1e-09
Identities = 15/19 (78%), Positives = 15/19 (78%), Gaps = 2/19 (10%)
Frame = -1
Query: 553 TSP--NYSXTFPSYSPTSP 503
TSP NYS T PSYSPTSP
Sbjct: 1695 TSPSYNYSPTSPSYSPTSP 1713
Score = 28.1 bits (61), Expect(2) = 1e-09
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSP+SP
Sbjct: 1607 TSPIYSATSPIYSPSSP 1623
Score = 65.9 bits (159), Expect = 2e-09
Identities = 31/64 (48%), Positives = 40/64 (62%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 357
P S P YSP+SP YSP+SP S SP Y+PSS +++PS YSPS P Y S++
Sbjct: 1738 PTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSP 1797
Query: 356 QYTP 345
Y+P
Sbjct: 1798 TYSP 1801
Score = 62.4 bits (150), Expect = 2e-08
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQF---SPSTGYSPSQPGYSPS 366
P I P YSP+SP YSP+SP + S YSP+SP + SPS YSP+ P YSP+
Sbjct: 1620 PSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPT 1679
Query: 365 STS-QYTP 345
S S Y+P
Sbjct: 1680 SPSYSYSP 1687
Score = 62.4 bits (150), Expect = 2e-08
Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 10/74 (13%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSP-YN--------SGVSPDYSPSSPQFSP-STGYSPS 387
P S P+ S YSP+SP+YSP+SP YN S SP YSP+SP +SP S YSP+
Sbjct: 1674 PSYSPTSPSYS-YSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1732
Query: 386 QPGYSPSSTSQYTP 345
P YSP+S S Y+P
Sbjct: 1733 SPSYSPTS-SAYSP 1745
Score = 59.7 bits (143), Expect = 1e-07
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 14/78 (17%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSP-YN-SGVSPDYSPSSPQFS------------PSTG 399
P + P S YSP+SP+Y+P+SP Y+ S SP YSP+SP +S PS
Sbjct: 1641 PTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYN 1700
Query: 398 YSPSQPGYSPSSTSQYTP 345
YSP+ P YSP+S S Y+P
Sbjct: 1701 YSPTSPSYSPTSPS-YSP 1717
Score = 59.3 bits (142), Expect = 2e-07
Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 9/66 (13%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P IYS +SP YSPSSP S S YSP+SP +SP S+ YSP+ P Y+P+S
Sbjct: 1606 PTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSP 1665
Query: 359 S-QYTP 345
S Y+P
Sbjct: 1666 SYSYSP 1671
Score = 54.7 bits (130), Expect = 4e-06
Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 7/59 (11%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS------TSQYTP 345
Y P+S +SP+SP S SP YSPSSP +SP S YSP+ P YSP+S +S Y+P
Sbjct: 1597 YVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSP 1655
Score = 40.4 bits (93), Expect(2) = 6e-06
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -3
Query: 527 SIVFPNISIYSPSSPTY-SPSSPYNSGVSPDYSPSSPQFSPSTG 399
S+ + YSPSSP Y S +SP S SP YS SP +SP+ G
Sbjct: 1775 SVKYTPSHAYSPSSPNYYSSTSPTYSPTSPSYSQPSPSYSPTRG 1818
Score = 33.5 bits (75), Expect(2) = 6e-06
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1718 TSPSYSPTSPSYSPTSP 1734
[120][TOP]
>UniRef100_A9TK89 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TK89_PHYPA
Length = 1646
Score = 65.5 bits (158), Expect(2) = 9e-13
Identities = 37/81 (45%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP YSP+SP S SP YSP+SP ++P S YSP+ P YSP+S S Y+P +
Sbjct: 1565 PTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPS-YSPTS 1623
Query: 338 -----NDKDERGKD*WRRSMR 291
+ K W R MR
Sbjct: 1624 PSYSPTSPAYKHKPTWLRGMR 1644
Score = 31.6 bits (70), Expect(2) = 9e-13
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1545 TSPGYSPTSPGYSPTSP 1561
Score = 68.9 bits (167), Expect(2) = 1e-12
Identities = 34/53 (64%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP YSP+SP S SP YSP+SP +SP S GYSP+ PGYSP+S S Y+P
Sbjct: 1542 YSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPS-YSP 1593
Score = 27.7 bits (60), Expect(2) = 1e-12
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS P YSPTSP
Sbjct: 1531 SSPGYSPLSPGYSPTSP 1547
Score = 64.3 bits (155), Expect(2) = 2e-12
Identities = 31/53 (58%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP S Y+P+ P YSP+S S Y+P
Sbjct: 1563 YSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPS-YSP 1614
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1552 TSPGYSPTSPGYSPTSP 1568
Score = 69.3 bits (168), Expect = 2e-10
Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+SPSSP YSPSSP S +SP YSP+SP +SP S GYSP+ PGYSP+S S Y+P
Sbjct: 1521 FSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPS-YSP 1572
Score = 64.7 bits (156), Expect = 4e-09
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ YSPSSP YSP SP S SP YSP+SP +SP S GYSP+ P YSP+S Y+P
Sbjct: 1523 PSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPG-YSP 1579
Score = 54.7 bits (130), Expect(2) = 5e-09
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 7/59 (11%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP---GYSPS---STSQYTP 345
YSP+SP YSP+SP S SP YSP+SP +SP S GYSP+ P SPS ++ Y+P
Sbjct: 1549 YSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSP 1607
Score = 29.6 bits (65), Expect(2) = 5e-09
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSPTSP
Sbjct: 1539 SPGYSPTSPGYSPTSP 1554
[121][TOP]
>UniRef100_Q58EF0 Polr2a protein (Fragment) n=2 Tax=Danio rerio RepID=Q58EF0_DANRE
Length = 161
Score = 65.5 bits (158), Expect(2) = 1e-12
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 13/77 (16%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-----------TGYSPSQPGYSP 369
P YSP+SPTY+P+SP S SP YSP+SP++SP+ + YSP+ PGYSP
Sbjct: 83 PTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSP 142
Query: 368 SSTSQYTP--QTNDKDE 324
+S + Y+P +D DE
Sbjct: 143 TSPT-YSPAISPDDSDE 158
Score = 31.6 bits (70), Expect(2) = 1e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 49 TSPKYSPTSPKYSPTSP 65
Score = 64.3 bits (155), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 76 PTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 135
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 56 TSPKYSPTSPKYSPTSP 72
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 27 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 83
Score = 30.4 bits (67), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS + PSYSPTSP
Sbjct: 14 SSPSYSPSSPSYSPTSP 30
Score = 62.4 bits (150), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 62 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTS-PKYSP 118
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 28 TSPKYTPTSPSYSPSSP 44
Score = 63.2 bits (152), Expect(2) = 2e-11
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 34 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 90
Score = 29.3 bits (64), Expect(2) = 2e-11
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P Y+PTSP
Sbjct: 21 SSPSYSPTSPKYTPTSP 37
Score = 60.1 bits (144), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 55 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPT-YSP 111
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + P Y+PTSP
Sbjct: 35 TSPSYSPSSPEYTPTSP 51
Score = 63.9 bits (154), Expect = 7e-09
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P Y+PSSP+YSPSSP S SP Y+P+SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 6 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS-PKYSP 62
Score = 51.2 bits (121), Expect(2) = 2e-08
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPD---YSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP GYSP+ P YSP+ + +
Sbjct: 104 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP------GYSPTSPTYSPAISPDDSD 157
Query: 344 QTND 333
+ N+
Sbjct: 158 EENN 161
Score = 31.6 bits (70), Expect(2) = 2e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 70 TSPTYSPTTPKYSPTSP 86
Score = 62.8 bits (151), Expect = 2e-08
Identities = 30/53 (56%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SPTY+PSSP S SP YSP+SP+++P S YSPS P Y+P+S +Y+P
Sbjct: 4 YTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS-PKYSP 55
Score = 52.4 bits (124), Expect(2) = 2e-07
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 5/62 (8%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQY 351
P+ Y+P+SP YSP SP SP YSP+SP +SP+T YSP+ P YSP+S + Y
Sbjct: 41 PSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPT-Y 95
Query: 350 TP 345
TP
Sbjct: 96 TP 97
Score = 26.9 bits (58), Expect(2) = 2e-07
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP Y+ + PSYSP+SP
Sbjct: 8 SPTYTPSSPSYSPSSP 23
[122][TOP]
>UniRef100_A8IRZ2 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IRZ2_CHLRE
Length = 1789
Score = 64.7 bits (156), Expect(2) = 1e-12
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1587 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1643
Score = 32.0 bits (71), Expect(2) = 1e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1560 TSPRYSPTSPAYSPTSP 1576
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1566 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1622
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS---STSQYT 348
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+ ++ QY+
Sbjct: 1608 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPAYSPTSPQYS 1667
Query: 347 P 345
P
Sbjct: 1668 P 1668
Score = 31.2 bits (69), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1553 TSPGYSPTSPRYSPTSP 1569
Score = 31.2 bits (69), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1567 TSPAYSPTSPAYSPTSP 1583
Score = 62.8 bits (151), Expect(2) = 8e-12
Identities = 30/53 (56%), Positives = 37/53 (69%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 357
P YSP+SP YSP+SP S SP YSP+SP +SP+ YSP+ P YSP+S S
Sbjct: 1622 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPA--YSPTSPQYSPTSPS 1672
Score = 31.2 bits (69), Expect(2) = 8e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1574 TSPAYSPTSPAYSPTSP 1590
Score = 63.9 bits (154), Expect(2) = 1e-11
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1559 PTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1615
Score = 29.6 bits (65), Expect(2) = 1e-11
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSPTSP
Sbjct: 1547 SPGYSPTSPGYSPTSP 1562
Score = 56.6 bits (135), Expect(2) = 5e-10
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 5/56 (8%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPS----SPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P YSP+SP YSP+ SP S SP SP+SP++SP S YSP+ P YSPS+
Sbjct: 1643 PTSPAYSPTSPAYSPAYSPTSPQYSPTSPSMSPTSPRYSPTSPNYSPTSPNYSPST 1698
Score = 31.2 bits (69), Expect(2) = 5e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1588 TSPAYSPTSPAYSPTSP 1604
Score = 53.5 bits (127), Expect(2) = 4e-09
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP YSP +SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1594 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1653
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1654 A-YSP 1657
Score = 31.2 bits (69), Expect(2) = 4e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1581 TSPAYSPTSPAYSPTSP 1597
Score = 63.2 bits (152), Expect = 1e-08
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1557 YSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1608
Score = 62.8 bits (151), Expect = 2e-08
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1550 YSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1601
Score = 57.4 bits (137), Expect = 7e-07
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = -3
Query: 494 PSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1545 PMSPGYSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1594
Score = 43.5 bits (101), Expect(2) = 3e-06
Identities = 24/57 (42%), Positives = 31/57 (54%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P SP+SP YSP+SP S SP+YSPS+ Q ST P+ G ++ Q P
Sbjct: 1668 PTSPSMSPTSPRYSPTSPNYSPTSPNYSPSTRQRRRSTRPRPTSLGRRRAARVQAAP 1724
Score = 31.2 bits (69), Expect(2) = 3e-06
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1616 TSPAYSPTSPAYSPTSP 1632
Score = 53.5 bits (127), Expect = 1e-05
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP YSP +SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1573 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1632
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1633 A-YSP 1636
[123][TOP]
>UniRef100_C1MI48 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MI48_9CHLO
Length = 1694
Score = 64.7 bits (156), Expect(2) = 1e-12
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1563 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1619
Score = 32.0 bits (71), Expect(2) = 1e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1531 TSPGYSPTSPAYSPTSP 1547
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1584 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1640
Score = 31.2 bits (69), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1538 TSPAYSPTSPAYSPTSP 1554
Score = 62.8 bits (151), Expect(2) = 8e-12
Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1605 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTS 1656
Score = 31.2 bits (69), Expect(2) = 8e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1564 TSPAYSPTSPAYSPTSP 1580
Score = 60.1 bits (144), Expect(2) = 5e-11
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 10/74 (13%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST----------GYSPSQPGYSPS 366
P YSP+SP YSP+SP S SP YSP+SPQ+SP++ SP+ P YSP+
Sbjct: 1619 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSVGLSDVENAPTRSPTSPQYSPT 1678
Query: 365 STSQYTPQTNDKDE 324
+ +T +K+E
Sbjct: 1679 EGAFSPMETTEKEE 1692
Score = 31.2 bits (69), Expect(2) = 5e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1571 TSPAYSPTSPAYSPTSP 1587
Score = 59.7 bits (143), Expect(2) = 6e-11
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+P+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1562 APTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1612
Score = 31.2 bits (69), Expect(2) = 6e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1545 TSPAYSPTSPAYSPTSP 1561
Score = 55.1 bits (131), Expect(2) = 1e-09
Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP YSP +SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1591 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS- 1649
Query: 359 SQYTP 345
QY+P
Sbjct: 1650 PQYSP 1654
Score = 31.2 bits (69), Expect(2) = 1e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1578 TSPAYSPTSPAYSPTSP 1594
Score = 58.5 bits (140), Expect(2) = 2e-08
Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 6/63 (9%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNS-----GVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S +
Sbjct: 1537 PTSPAYSPTSPAYSPTSPAYSPTSPAPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA- 1595
Query: 353 YTP 345
Y+P
Sbjct: 1596 YSP 1598
Score = 23.9 bits (50), Expect(2) = 2e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
+S T P YSPTSP
Sbjct: 1528 FSPTSPGYSPTSP 1540
Score = 59.3 bits (142), Expect = 2e-07
Identities = 30/58 (51%), Positives = 39/58 (67%), Gaps = 6/58 (10%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP------STGYSPSQPGYSPSSTSQYTP 345
+SP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1528 FSPTSPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAPTSPAYSPTSPAYSPTSPA-YSP 1584
Score = 53.5 bits (127), Expect = 1e-05
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP YSP +SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1570 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1629
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1630 A-YSP 1633
[124][TOP]
>UniRef100_O96452 DNA-directed RNA polymerase n=1 Tax=Antonospora locustae
RepID=O96452_ANTLO
Length = 1553
Score = 65.1 bits (157), Expect(2) = 2e-12
Identities = 35/78 (44%), Positives = 43/78 (55%), Gaps = 14/78 (17%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ----- 354
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S +
Sbjct: 1462 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1521
Query: 353 --------YTPQTNDKDE 324
Y P T KD+
Sbjct: 1522 AYSPTSPVYRPSTRAKDQ 1539
Score = 31.2 bits (69), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1442 TSPAYSPTSPAYSPTSP 1458
Score = 66.2 bits (160), Expect = 1e-09
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = -3
Query: 527 SIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
S+ P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y
Sbjct: 1437 SVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-Y 1495
Query: 350 TP 345
+P
Sbjct: 1496 SP 1497
Score = 50.8 bits (120), Expect(2) = 2e-08
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYS 372
P YSP+SP YSP+SP S SP YSP+SP + PST G++
Sbjct: 1497 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPVYRPSTRAKDQDQGFN 1544
Score = 31.2 bits (69), Expect(2) = 2e-08
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1449 TSPAYSPTSPAYSPTSP 1465
Score = 53.5 bits (127), Expect(2) = 9e-08
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSP-------SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP YSP +SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1448 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1507
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1508 A-YSP 1511
Score = 26.6 bits (57), Expect(2) = 9e-08
Identities = 12/18 (66%), Positives = 15/18 (83%), Gaps = 1/18 (5%)
Frame = -1
Query: 553 TSPN-YSXTFPSYSPTSP 503
T+P+ YS T P+YSPTSP
Sbjct: 1434 TTPSVYSPTSPAYSPTSP 1451
[125][TOP]
>UniRef100_UPI00006A20E2 DNA-directed RNA polymerase II subunit RPB1 (EC 2.7.7.6) (RNA
polymerase II subunit B1) (DNA-directed RNA polymerase
II subunit A) (DNA-directed RNA polymerase III largest
subunit). n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI00006A20E2
Length = 162
Score = 64.7 bits (156), Expect(2) = 2e-12
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST--SQYTP 345
P YSP+SPTYSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 75 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 134
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 48 TSPKYSPTSPKYSPTSP 64
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSPSSP Y+P+SP S SP YSP+SP++SP S YSP+ P YSP+S + Y+P
Sbjct: 33 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT-YSP 89
Score = 30.4 bits (67), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS + PSYSPTSP
Sbjct: 13 SSPSYSPSSPSYSPTSP 29
Score = 62.0 bits (149), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SPTYSP++P S SP YSP+SP ++P S YSP+ P YSP+S +Y+P
Sbjct: 61 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS-PKYSP 117
Score = 30.4 bits (67), Expect(2) = 2e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ T PSYSP+SP
Sbjct: 27 TSPKYTPTSPSYSPSSP 43
Score = 65.5 bits (158), Expect(2) = 2e-10
Identities = 32/58 (55%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ YSPSSP+YSP+SP + SP YSPSSP+++P S YSP+ P YSP+S +Y+P
Sbjct: 12 PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS-PKYSP 68
Score = 59.7 bits (143), Expect(2) = 2e-10
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S +P YSP+SP +SP S Y+P+ P YSP+S + Y+P
Sbjct: 54 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPT-YSP 110
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P Y+PTSP
Sbjct: 20 SSPSYSPTSPKYTPTSP 36
Score = 23.5 bits (49), Expect(2) = 2e-10
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 547 PNYSXTFPSYSPTSP 503
P Y+ PSY+P+SP
Sbjct: 1 PRYTPQSPSYTPSSP 15
Score = 63.5 bits (153), Expect = 1e-08
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P Y+PSSP+YSPSSP S SP Y+P+SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 5 PQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS-PKYSP 61
Score = 62.8 bits (151), Expect = 2e-08
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS-- 363
P + P YSP+SPTYSP+SP S SP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 89 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGYSPTSPT 145
Query: 362 ----TSQYTPQTNDKD 327
+ +P +D+D
Sbjct: 146 YSLTSPAISPDDSDED 161
Score = 61.2 bits (147), Expect = 5e-08
Identities = 29/53 (54%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
Y+P SP+Y+PSSP S SP YSP+SP+++P S YSPS P Y+P+S +Y+P
Sbjct: 3 YTPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS-PKYSP 54
[126][TOP]
>UniRef100_Q5WMZ9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q5WMZ9_ORYSJ
Length = 1741
Score = 62.4 bits (150), Expect(2) = 2e-12
Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQY 351
P S YSP+SP YSP+SP S SP YSPSSP ++PS+ Y+PS YSPSS + Y
Sbjct: 1685 PTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSH-AYSPSSPNYY 1739
Score = 33.5 bits (75), Expect(2) = 2e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1651 TSPSYSPTSPSYSPTSP 1667
Score = 67.0 bits (162), Expect(2) = 3e-12
Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 8/67 (11%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S
Sbjct: 1650 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSP 1709
Query: 359 SQYTPQT 339
S Y+P +
Sbjct: 1710 S-YSPSS 1715
Score = 28.5 bits (62), Expect(2) = 3e-12
Identities = 14/19 (73%), Positives = 15/19 (78%), Gaps = 2/19 (10%)
Frame = -1
Query: 553 TSPNYSX--TFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1610 TSPSYSYSPTSPSYSPTSP 1628
Score = 58.5 bits (140), Expect(2) = 1e-09
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 13/70 (18%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQF------------SPSTGYSPSQPGYS 372
P +YSP+SP Y+P+S S SP Y+P+SP + SPS YSP+ P YS
Sbjct: 1581 PTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYS 1640
Query: 371 PSSTS-QYTP 345
P+S S Y+P
Sbjct: 1641 PTSPSYNYSP 1650
Score = 56.2 bits (134), Expect(2) = 1e-09
Identities = 33/64 (51%), Positives = 41/64 (64%), Gaps = 7/64 (10%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP---GYSPS---STS 357
P YSP+SP+YSP+SP S S YSP+SP +SP S GYSP+ P SPS S+
Sbjct: 1664 PTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSV 1723
Query: 356 QYTP 345
+YTP
Sbjct: 1724 KYTP 1727
Score = 30.4 bits (67), Expect(2) = 1e-09
Identities = 15/19 (78%), Positives = 15/19 (78%), Gaps = 2/19 (10%)
Frame = -1
Query: 553 TSP--NYSXTFPSYSPTSP 503
TSP NYS T PSYSPTSP
Sbjct: 1642 TSPSYNYSPTSPSYSPTSP 1660
Score = 28.1 bits (61), Expect(2) = 1e-09
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSP+SP
Sbjct: 1554 TSPIYSATSPIYSPSSP 1570
Score = 62.4 bits (150), Expect = 2e-08
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQF---SPSTGYSPSQPGYSPS 366
P I P YSP+SP YSP+SP + S YSP+SP + SPS YSP+ P YSP+
Sbjct: 1567 PSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPT 1626
Query: 365 STS-QYTP 345
S S Y+P
Sbjct: 1627 SPSYSYSP 1634
Score = 62.4 bits (150), Expect = 2e-08
Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 10/74 (13%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSP-YN--------SGVSPDYSPSSPQFSP-STGYSPS 387
P S P+ S YSP+SP+YSP+SP YN S SP YSP+SP +SP S YSP+
Sbjct: 1621 PSYSPTSPSYS-YSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1679
Query: 386 QPGYSPSSTSQYTP 345
P YSP+S S Y+P
Sbjct: 1680 SPSYSPTS-SAYSP 1692
Score = 59.7 bits (143), Expect = 1e-07
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 14/78 (17%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSP-YN-SGVSPDYSPSSPQFS------------PSTG 399
P + P S YSP+SP+Y+P+SP Y+ S SP YSP+SP +S PS
Sbjct: 1588 PTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYN 1647
Query: 398 YSPSQPGYSPSSTSQYTP 345
YSP+ P YSP+S S Y+P
Sbjct: 1648 YSPTSPSYSPTSPS-YSP 1664
Score = 59.7 bits (143), Expect = 1e-07
Identities = 28/54 (51%), Positives = 34/54 (62%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGY 375
P S P YSP+SP YSP+SP S SP Y+PSS +++PS YSPS P Y
Sbjct: 1685 PTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNY 1738
Score = 59.3 bits (142), Expect = 2e-07
Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 9/66 (13%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P IYS +SP YSPSSP S S YSP+SP +SP S+ YSP+ P Y+P+S
Sbjct: 1553 PTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSP 1612
Query: 359 S-QYTP 345
S Y+P
Sbjct: 1613 SYSYSP 1618
Score = 54.7 bits (130), Expect = 4e-06
Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 7/59 (11%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS------TSQYTP 345
Y P+S +SP+SP S SP YSPSSP +SP S YSP+ P YSP+S +S Y+P
Sbjct: 1544 YVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSP 1602
[127][TOP]
>UniRef100_Q0DKN9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q0DKN9_ORYSJ
Length = 1834
Score = 67.0 bits (162), Expect(2) = 3e-12
Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 8/67 (11%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S
Sbjct: 1703 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSP 1762
Query: 359 SQYTPQT 339
S Y+P +
Sbjct: 1763 S-YSPSS 1768
Score = 28.5 bits (62), Expect(2) = 3e-12
Identities = 14/19 (73%), Positives = 15/19 (78%), Gaps = 2/19 (10%)
Frame = -1
Query: 553 TSPNYSX--TFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1663 TSPSYSYSPTSPSYSPTSP 1681
Score = 56.2 bits (134), Expect(2) = 1e-10
Identities = 33/64 (51%), Positives = 41/64 (64%), Gaps = 7/64 (10%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP---GYSPS---STS 357
P YSP+SP+YSP+SP S S YSP+SP +SP S GYSP+ P SPS S+
Sbjct: 1717 PTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSV 1776
Query: 356 QYTP 345
+YTP
Sbjct: 1777 KYTP 1780
Score = 33.5 bits (75), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1704 TSPSYSPTSPSYSPTSP 1720
Score = 58.5 bits (140), Expect(2) = 1e-09
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 13/70 (18%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQF------------SPSTGYSPSQPGYS 372
P +YSP+SP Y+P+S S SP Y+P+SP + SPS YSP+ P YS
Sbjct: 1634 PTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYS 1693
Query: 371 PSSTS-QYTP 345
P+S S Y+P
Sbjct: 1694 PTSPSYNYSP 1703
Score = 28.1 bits (61), Expect(2) = 1e-09
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSP+SP
Sbjct: 1607 TSPIYSATSPIYSPSSP 1623
Score = 65.9 bits (159), Expect = 2e-09
Identities = 31/64 (48%), Positives = 40/64 (62%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 357
P S P YSP+SP YSP+SP S SP Y+PSS +++PS YSPS P Y S++
Sbjct: 1738 PTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSP 1797
Query: 356 QYTP 345
Y+P
Sbjct: 1798 TYSP 1801
Score = 62.4 bits (150), Expect = 2e-08
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQF---SPSTGYSPSQPGYSPS 366
P I P YSP+SP YSP+SP + S YSP+SP + SPS YSP+ P YSP+
Sbjct: 1620 PSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPT 1679
Query: 365 STS-QYTP 345
S S Y+P
Sbjct: 1680 SPSYSYSP 1687
Score = 62.4 bits (150), Expect = 2e-08
Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 10/74 (13%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSP-YN--------SGVSPDYSPSSPQFSP-STGYSPS 387
P S P+ S YSP+SP+YSP+SP YN S SP YSP+SP +SP S YSP+
Sbjct: 1674 PSYSPTSPSYS-YSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1732
Query: 386 QPGYSPSSTSQYTP 345
P YSP+S S Y+P
Sbjct: 1733 SPSYSPTS-SAYSP 1745
Score = 59.7 bits (143), Expect = 1e-07
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 14/78 (17%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSP-YN-SGVSPDYSPSSPQFS------------PSTG 399
P + P S YSP+SP+Y+P+SP Y+ S SP YSP+SP +S PS
Sbjct: 1641 PTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYN 1700
Query: 398 YSPSQPGYSPSSTSQYTP 345
YSP+ P YSP+S S Y+P
Sbjct: 1701 YSPTSPSYSPTSPS-YSP 1717
Score = 45.8 bits (107), Expect(2) = 1e-07
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P+ Y+PSS Y+PS Y+ YS +SP +SP S YS P YSP+S +
Sbjct: 1766 PSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSPTYSPTSPSYSQPSPSYSPTSRVEEEAHE 1825
Query: 338 NDKDERGK 315
++E K
Sbjct: 1826 EAEEEEPK 1833
Score = 33.5 bits (75), Expect(2) = 1e-07
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1711 TSPSYSPTSPSYSPTSP 1727
Score = 59.3 bits (142), Expect = 2e-07
Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 9/66 (13%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P IYS +SP YSPSSP S S YSP+SP +SP S+ YSP+ P Y+P+S
Sbjct: 1606 PTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSP 1665
Query: 359 S-QYTP 345
S Y+P
Sbjct: 1666 SYSYSP 1671
Score = 54.7 bits (130), Expect = 4e-06
Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 7/59 (11%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS------TSQYTP 345
Y P+S +SP+SP S SP YSPSSP +SP S YSP+ P YSP+S +S Y+P
Sbjct: 1597 YVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSP 1655
[128][TOP]
>UniRef100_C6F1E9 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1E9_PLAVI
Length = 225
Score = 63.9 bits (154), Expect(2) = 3e-12
Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSPSS P +
Sbjct: 72 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSS 131
Score = 31.6 bits (70), Expect(2) = 3e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 59 TSPKYSPTSPKYSPTSP 75
Score = 65.1 bits (157), Expect(2) = 1e-11
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S QY+P +
Sbjct: 65 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PQYSPSS 123
Score = 28.5 bits (62), Expect(2) = 1e-11
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSPTSP
Sbjct: 53 SPVYSVTSPKYSPTSP 68
Score = 59.3 bits (142), Expect(2) = 7e-11
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP++SP S YSPS P + S+ Y+P
Sbjct: 79 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSP 136
Score = 31.6 bits (70), Expect(2) = 7e-11
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 66 TSPKYSPTSPKYSPTSP 82
Score = 54.7 bits (130), Expect = 4e-06
Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Frame = -3
Query: 521 VFPNISIY-SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYT 348
V PN+ Y S SP YS +SP S SP YSP+SP++SP S YSP+ P YSP+S +Y+
Sbjct: 41 VNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYS 99
Query: 347 P 345
P
Sbjct: 100 P 100
[129][TOP]
>UniRef100_O00820 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acanthamoeba
castellanii RepID=O00820_ACACA
Length = 1569
Score = 67.8 bits (164), Expect(2) = 5e-12
Identities = 34/53 (64%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSPSSP YSP+SP S SP YSP+SP +SP S YSPS P YSP+S S Y+P
Sbjct: 1510 YSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTSPSYSPSSPSYSPTSPS-YSP 1561
Score = 26.9 bits (58), Expect(2) = 5e-12
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS + P YSP+SP
Sbjct: 1485 SSPGYSPSSPGYSPSSP 1501
Score = 67.0 bits (162), Expect(2) = 1e-11
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P+ YSP+SP YSP+SP S SP YSP+SP +SPS+ YSP+ P YSP+S S Y+P
Sbjct: 1512 PSSPAYSPTSPKYSPASPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPS-YSP 1568
Score = 65.1 bits (157), Expect(2) = 1e-11
Identities = 31/51 (60%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS 366
P YSP+SP+YSP+SP S SP YSPSSP +SP S YSP+ P YSPS
Sbjct: 1519 PTSPKYSPASPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPS 1569
Score = 28.5 bits (62), Expect(2) = 1e-11
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS + P+YSPTSP
Sbjct: 1507 SPGYSPSSPAYSPTSP 1522
Score = 26.6 bits (57), Expect(2) = 1e-11
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP YS + P YSP SP
Sbjct: 1492 SSPGYSPSSPGYSPASP 1508
Score = 65.9 bits (159), Expect(2) = 3e-10
Identities = 35/58 (60%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ YSPSSP YSPSSP S SP YSPSSP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1484 PSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPA-YSP 1540
Score = 22.7 bits (47), Expect(2) = 3e-10
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS YSP+SP
Sbjct: 1472 SPGYSPAGAGYSPSSP 1487
Score = 65.1 bits (157), Expect(2) = 6e-10
Identities = 34/53 (64%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
YSPSSP YSPSSP S SP YSP+SP +SPS+ YSP+ P YSP+S S Y+P
Sbjct: 1482 YSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPS-YSP 1533
Score = 22.3 bits (46), Expect(2) = 6e-10
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 553 TSPNYSXTFPSYSP 512
+SP+YS P YSP
Sbjct: 1464 SSPSYSPASPGYSP 1477
Score = 65.9 bits (159), Expect = 2e-09
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P+ YSP+SP YSP+ S SP YSPSSP +SPS+ GYSP+ PGYSPSS + Y+P
Sbjct: 1463 PSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPA-YSP 1519
Score = 65.1 bits (157), Expect = 3e-09
Identities = 33/54 (61%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
SPSSP+YSP+SP S YSPSSP +SPS+ GYSPS PGYSP+S Y+P +
Sbjct: 1462 SPSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPG-YSPSS 1514
[130][TOP]
>UniRef100_C6F1F2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi
RepID=C6F1F2_9APIC
Length = 232
Score = 62.8 bits (151), Expect(2) = 6e-12
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S P +
Sbjct: 79 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSS 138
Score = 31.6 bits (70), Expect(2) = 6e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 59 TSPKYSPTSPKYSPTSP 75
Score = 60.8 bits (146), Expect(2) = 2e-10
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP Y P+SP S SP YSP+SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 65 PTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 121
Score = 57.8 bits (138), Expect(2) = 2e-10
Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY--SPSQPGYSP 369
P YSP+SP YSP+SP S SP YSP+SPQ+SP++ +PS P YSP
Sbjct: 93 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSP 143
Score = 31.6 bits (70), Expect(2) = 2e-10
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 80 TSPKYSPTSPKYSPTSP 96
Score = 28.5 bits (62), Expect(2) = 2e-10
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSPTSP
Sbjct: 53 SPVYSVTSPKYSPTSP 68
Score = 62.0 bits (149), Expect = 3e-08
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Frame = -3
Query: 527 SIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
S+V P S+ YSP+SP YSP+SP SP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 50 SVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 109
Query: 362 TSQYTP 345
+Y+P
Sbjct: 110 -PKYSP 114
[131][TOP]
>UniRef100_B4NDK9 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4NDK9_DROWI
Length = 1890
Score = 62.0 bits (149), Expect(2) = 8e-12
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + V+P YSP+SP +S S YSP+ P YS + +Y+P
Sbjct: 1704 PTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGV-KYSP 1759
Score = 32.0 bits (71), Expect(2) = 8e-12
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + PSYSPTSP
Sbjct: 1691 TSPSYSPSSPSYSPTSP 1707
Score = 59.7 bits (143), Expect(2) = 3e-11
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P Y+P SP YSP+SP S SP YSPSSPQ SPS YSP+ YS +S +Y+P
Sbjct: 1775 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATS-PRYSP 1830
Score = 32.3 bits (72), Expect(2) = 3e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ PSYSPTSP
Sbjct: 1719 TSPNYTPVTPSYSPTSP 1735
Score = 63.9 bits (154), Expect(2) = 4e-11
Identities = 30/53 (56%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--TGYSPSQPGYSPSS 363
PN+SIYSPSS YSP+SP + + +YSP+SP +SP+ + YSP+ P YSPSS
Sbjct: 1830 PNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSS 1882
Score = 27.7 bits (60), Expect(2) = 4e-11
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P YSPTSP
Sbjct: 1784 SPQYSPASPKYSPTSP 1799
Score = 58.2 bits (139), Expect(2) = 1e-10
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 10/62 (16%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQY 351
YSP+SPTYSP SP G SP YSP+SP++SP++ YSPS P +SPS +QY
Sbjct: 1757 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQY 1814
Query: 350 TP 345
+P
Sbjct: 1815 SP 1816
Score = 32.0 bits (71), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1705 TSPCYSPTSPSYSPTSP 1721
Score = 64.3 bits (155), Expect(2) = 2e-10
Identities = 33/55 (60%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
YSPSS Y+P+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1674 YSPSSSNYTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1727
Score = 25.0 bits (53), Expect(2) = 2e-10
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
+S YS T P YSPTS F
Sbjct: 1637 SSSGYSPTSPVYSPTSNF 1654
Score = 62.8 bits (151), Expect(2) = 6e-10
Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFS-PSTGYSPSQPGYSPSSTSQYTPQTN 336
YSPSSP YSP+SP + SP Y+ ++P F+ STGYSPS GYSP+S Y+P +N
Sbjct: 1599 YSPSSPNYSPTSPLYAATSPRYASTTPNFNLQSTGYSPSSSGYSPTS-PVYSPTSN 1653
Score = 24.6 bits (52), Expect(2) = 6e-10
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y+ +SP
Sbjct: 1576 SPSYSPTSPNYTASSP 1591
Score = 65.5 bits (158), Expect = 3e-09
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P S PN YSP+SP+YSPSSP S SP YSP+SP +SP S Y+P P YSP+S
Sbjct: 1676 PSSSNYTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTS 1734
Score = 55.8 bits (133), Expect(2) = 1e-08
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P S YS +SP YSP+ S S YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1816 PTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1873
Score = 27.3 bits (59), Expect(2) = 1e-08
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSP+SP
Sbjct: 1791 SPKYSPTSPLYSPSSP 1806
Score = 52.0 bits (123), Expect(2) = 2e-08
Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 15/72 (20%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPY------NSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTS 357
P YSP+SP Y+P +P N SP YSP+SP +S + YSP+ P YSP S S
Sbjct: 1711 PTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSPS 1770
Query: 356 --------QYTP 345
QYTP
Sbjct: 1771 YDGSPGSPQYTP 1782
Score = 51.2 bits (121), Expect(2) = 2e-08
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 20/77 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVS-------------------PDYSPSSPQFSP-STGY 396
P+ S YSP+SP YSP+S + S S +Y+P+SP +SP S Y
Sbjct: 1636 PSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYTPNSPSYSPTSPSY 1695
Query: 395 SPSQPGYSPSSTSQYTP 345
SPS P YSP+S Y+P
Sbjct: 1696 SPSSPSYSPTSPC-YSP 1711
Score = 30.8 bits (68), Expect(2) = 2e-08
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS + P+YSPTSP
Sbjct: 1596 SPNYSPSSPNYSPTSP 1611
Score = 30.0 bits (66), Expect(2) = 2e-08
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P YSPTSP
Sbjct: 1698 SSPSYSPTSPCYSPTSP 1714
Score = 52.4 bits (124), Expect(2) = 5e-07
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP YSP+SP S SP +SPS+ Q+SP S YSP+ YSPSST
Sbjct: 1782 PGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNMSIYSPSST 1840
Query: 359 SQYTP 345
+Y+P
Sbjct: 1841 -KYSP 1844
Score = 25.0 bits (53), Expect(2) = 5e-07
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T YSPTSP
Sbjct: 1747 SPAYSQTGVKYSPTSP 1762
Score = 53.5 bits (127), Expect = 1e-05
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ S PN YSP+SP Y+ +SP + +P+++ S +SP S+GYSP+ P YSP+S
Sbjct: 1597 PNYSPSSPN---YSPTSPLYAATSPRYASTTPNFNLQSTGYSPSSSGYSPTSPVYSPTSN 1653
Query: 359 SQYTP 345
Q +P
Sbjct: 1654 FQSSP 1658
[132][TOP]
>UniRef100_Q9XZU9 DNA-directed RNA polymerase n=1 Tax=Drosophila subobscura
RepID=Q9XZU9_DROSU
Length = 1889
Score = 62.0 bits (149), Expect(2) = 8e-12
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSPSSP+YSP+SP + +P YSP+SP +S S YSP+ P YS + ++Y+P
Sbjct: 1703 PTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTG-AKYSP 1758
Score = 32.0 bits (71), Expect(2) = 8e-12
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + PSYSPTSP
Sbjct: 1690 TSPSYSPSSPSYSPTSP 1706
Score = 59.7 bits (143), Expect(2) = 3e-11
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P Y+P SP YSP+SP S SP YSPSSPQ SPS YSP+ YS +S +Y+P
Sbjct: 1774 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATS-PRYSP 1829
Score = 32.3 bits (72), Expect(2) = 3e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ PSYSPTSP
Sbjct: 1718 TSPNYTPATPSYSPTSP 1734
Score = 63.9 bits (154), Expect(2) = 4e-11
Identities = 30/53 (56%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--TGYSPSQPGYSPSS 363
PN+SIYSPSS YSP+SP + + +YSP+SP +SP+ + YSP+ P YSPSS
Sbjct: 1829 PNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSS 1881
Score = 27.7 bits (60), Expect(2) = 4e-11
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P YSPTSP
Sbjct: 1783 SPQYSPASPKYSPTSP 1798
Score = 67.0 bits (162), Expect(2) = 6e-11
Identities = 35/55 (63%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
YSPSS YSP+SP S SP YSPSSP +SP S YSPS P YSP+S + YTP T
Sbjct: 1673 YSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPN-YTPAT 1726
Score = 23.9 bits (50), Expect(2) = 6e-11
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
++ YS T P YSPTS F
Sbjct: 1636 SASGYSPTSPVYSPTSNF 1653
Score = 64.7 bits (156), Expect(2) = 2e-10
Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 336
YSPSSP YSP+SP + SP Y+ ++P F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1598 YSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTS-PVYSPTSN 1652
Score = 24.6 bits (52), Expect(2) = 2e-10
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y+ +SP
Sbjct: 1576 SPSYSPTSPNYTASSP 1591
Score = 66.6 bits (161), Expect(2) = 3e-10
Identities = 32/52 (61%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
PN YSP+SP+YSPSSP S SP YSPSSP +SP S Y+P+ P YSP+S
Sbjct: 1682 PNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTS 1733
Score = 58.2 bits (139), Expect(2) = 3e-10
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 10/62 (16%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQY 351
YSP+SPTYSP SP G SP YSP+SP++SP++ YSPS P +SPS +QY
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQY 1813
Query: 350 TP 345
+P
Sbjct: 1814 SP 1815
Score = 30.4 bits (67), Expect(2) = 3e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS + PSYSPTSP
Sbjct: 1704 TSPCYSPSSPSYSPTSP 1720
Score = 21.9 bits (45), Expect(2) = 3e-10
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
S YS + YSPTSP
Sbjct: 1630 STGYSPSASGYSPTSP 1645
Score = 64.3 bits (155), Expect = 6e-09
Identities = 31/58 (53%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P+ + YSP+SP+YSP+SP S SP YSP+SP +SPS+ YSP+ P Y+P +T Y+P
Sbjct: 1675 PSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTP-ATPSYSP 1731
Score = 53.5 bits (127), Expect(2) = 9e-09
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 15/72 (20%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPY------NSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTS 357
P+ YSP+SP Y+P++P N SP YSP+SP +S + YSP+ P YSP S S
Sbjct: 1710 PSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPS 1769
Query: 356 --------QYTP 345
QYTP
Sbjct: 1770 YDGSPGSPQYTP 1781
Score = 30.0 bits (66), Expect(2) = 9e-09
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSP+SP
Sbjct: 1684 SPSYSPTSPSYSPSSP 1699
Score = 55.8 bits (133), Expect(2) = 1e-08
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P S YS +SP YSP+ S S YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1815 PTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 52.4 bits (124), Expect(2) = 1e-08
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 20/79 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVS-------------------PDYSPSSPQFSP-STGY 396
P+ S YSP+SP YSP+S + S S +YSP+SP +SP S Y
Sbjct: 1635 PSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSY 1694
Query: 395 SPSQPGYSPSSTSQYTPQT 339
SPS P YSP+S Y+P +
Sbjct: 1695 SPSSPSYSPTSPC-YSPSS 1712
Score = 30.8 bits (68), Expect(2) = 1e-08
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS + P+YSPTSP
Sbjct: 1595 SPNYSPSSPNYSPTSP 1610
Score = 27.3 bits (59), Expect(2) = 1e-08
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSP+SP
Sbjct: 1790 SPKYSPTSPLYSPSSP 1805
Score = 52.4 bits (124), Expect(2) = 4e-07
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP YSP+SP S SP +SPS+ Q+SP S YSP+ YSPSST
Sbjct: 1781 PGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNMSIYSPSST 1839
Query: 359 SQYTP 345
+Y+P
Sbjct: 1840 -KYSP 1843
Score = 25.4 bits (54), Expect(2) = 4e-07
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T YSPTSP
Sbjct: 1746 SPAYSQTGAKYSPTSP 1761
Score = 54.3 bits (129), Expect = 6e-06
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSST 360
P+ S PN YSP+SP Y+ SP + +P+++P S +SPS +GYSP+ P YSP+S
Sbjct: 1596 PNYSPSSPN---YSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSN 1652
Query: 359 SQYTP 345
+P
Sbjct: 1653 FPSSP 1657
[133][TOP]
>UniRef100_Q9XZS2 DNA-directed RNA polymerase n=1 Tax=Drosophila madeirensis
RepID=Q9XZS2_DROMD
Length = 1889
Score = 62.0 bits (149), Expect(2) = 8e-12
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSPSSP+YSP+SP + +P YSP+SP +S S YSP+ P YS + ++Y+P
Sbjct: 1703 PTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTG-AKYSP 1758
Score = 32.0 bits (71), Expect(2) = 8e-12
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + PSYSPTSP
Sbjct: 1690 TSPSYSPSSPSYSPTSP 1706
Score = 59.7 bits (143), Expect(2) = 3e-11
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P Y+P SP YSP+SP S SP YSPSSPQ SPS YSP+ YS +S +Y+P
Sbjct: 1774 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATS-PRYSP 1829
Score = 32.3 bits (72), Expect(2) = 3e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ PSYSPTSP
Sbjct: 1718 TSPNYTPATPSYSPTSP 1734
Score = 63.9 bits (154), Expect(2) = 4e-11
Identities = 30/53 (56%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--TGYSPSQPGYSPSS 363
PN+SIYSPSS YSP+SP + + +YSP+SP +SP+ + YSP+ P YSPSS
Sbjct: 1829 PNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSS 1881
Score = 27.7 bits (60), Expect(2) = 4e-11
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P YSPTSP
Sbjct: 1783 SPQYSPASPKYSPTSP 1798
Score = 67.0 bits (162), Expect(2) = 6e-11
Identities = 35/55 (63%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
YSPSS YSP+SP S SP YSPSSP +SP S YSPS P YSP+S + YTP T
Sbjct: 1673 YSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPN-YTPAT 1726
Score = 23.9 bits (50), Expect(2) = 6e-11
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
++ YS T P YSPTS F
Sbjct: 1636 SASGYSPTSPVYSPTSNF 1653
Score = 64.7 bits (156), Expect(2) = 2e-10
Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 336
YSPSSP YSP+SP + SP Y+ ++P F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1598 YSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTS-PVYSPTSN 1652
Score = 24.6 bits (52), Expect(2) = 2e-10
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y+ +SP
Sbjct: 1576 SPSYSPTSPNYTASSP 1591
Score = 66.6 bits (161), Expect(2) = 3e-10
Identities = 32/52 (61%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
PN YSP+SP+YSPSSP S SP YSPSSP +SP S Y+P+ P YSP+S
Sbjct: 1682 PNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTS 1733
Score = 58.2 bits (139), Expect(2) = 3e-10
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 10/62 (16%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQY 351
YSP+SPTYSP SP G SP YSP+SP++SP++ YSPS P +SPS +QY
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQY 1813
Query: 350 TP 345
+P
Sbjct: 1814 SP 1815
Score = 30.4 bits (67), Expect(2) = 3e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS + PSYSPTSP
Sbjct: 1704 TSPCYSPSSPSYSPTSP 1720
Score = 21.9 bits (45), Expect(2) = 3e-10
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
S YS + YSPTSP
Sbjct: 1630 STGYSPSASGYSPTSP 1645
Score = 64.3 bits (155), Expect = 6e-09
Identities = 31/58 (53%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P+ + YSP+SP+YSP+SP S SP YSP+SP +SPS+ YSP+ P Y+P +T Y+P
Sbjct: 1675 PSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTP-ATPSYSP 1731
Score = 53.5 bits (127), Expect(2) = 9e-09
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 15/72 (20%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPY------NSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTS 357
P+ YSP+SP Y+P++P N SP YSP+SP +S + YSP+ P YSP S S
Sbjct: 1710 PSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPS 1769
Query: 356 --------QYTP 345
QYTP
Sbjct: 1770 YDGSPGSPQYTP 1781
Score = 30.0 bits (66), Expect(2) = 9e-09
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSP+SP
Sbjct: 1684 SPSYSPTSPSYSPSSP 1699
Score = 55.8 bits (133), Expect(2) = 1e-08
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P S YS +SP YSP+ S S YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1815 PTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 52.4 bits (124), Expect(2) = 1e-08
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 20/79 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVS-------------------PDYSPSSPQFSP-STGY 396
P+ S YSP+SP YSP+S + S S +YSP+SP +SP S Y
Sbjct: 1635 PSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSY 1694
Query: 395 SPSQPGYSPSSTSQYTPQT 339
SPS P YSP+S Y+P +
Sbjct: 1695 SPSSPSYSPTSPC-YSPSS 1712
Score = 30.8 bits (68), Expect(2) = 1e-08
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS + P+YSPTSP
Sbjct: 1595 SPNYSPSSPNYSPTSP 1610
Score = 27.3 bits (59), Expect(2) = 1e-08
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSP+SP
Sbjct: 1790 SPKYSPTSPLYSPSSP 1805
Score = 52.4 bits (124), Expect(2) = 4e-07
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP YSP+SP S SP +SPS+ Q+SP S YSP+ YSPSST
Sbjct: 1781 PGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNMSIYSPSST 1839
Query: 359 SQYTP 345
+Y+P
Sbjct: 1840 -KYSP 1843
Score = 25.4 bits (54), Expect(2) = 4e-07
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T YSPTSP
Sbjct: 1746 SPAYSQTGAKYSPTSP 1761
Score = 54.3 bits (129), Expect = 6e-06
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSST 360
P+ S PN YSP+SP Y+ SP + +P+++P S +SPS +GYSP+ P YSP+S
Sbjct: 1596 PNYSPSSPN---YSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSN 1652
Query: 359 SQYTP 345
+P
Sbjct: 1653 FPSSP 1657
[134][TOP]
>UniRef100_B3NUC1 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3NUC1_DROER
Length = 1889
Score = 62.0 bits (149), Expect(2) = 8e-12
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + V+P YSP+SP +S S YSP+ P YS + +Y+P
Sbjct: 1703 PTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGV-KYSP 1758
Score = 32.0 bits (71), Expect(2) = 8e-12
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + PSYSPTSP
Sbjct: 1690 TSPSYSPSSPSYSPTSP 1706
Score = 59.7 bits (143), Expect(2) = 3e-11
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P Y+P SP YSP+SP S SP YSPSSPQ SPS YSP+ YS +S +Y+P
Sbjct: 1774 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATS-PRYSP 1829
Score = 32.3 bits (72), Expect(2) = 3e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ PSYSPTSP
Sbjct: 1718 TSPNYTPVTPSYSPTSP 1734
Score = 63.9 bits (154), Expect(2) = 4e-11
Identities = 30/53 (56%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--TGYSPSQPGYSPSS 363
PN+SIYSPSS YSP+SP + + +YSP+SP +SP+ + YSP+ P YSPSS
Sbjct: 1829 PNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSS 1881
Score = 27.7 bits (60), Expect(2) = 4e-11
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P YSPTSP
Sbjct: 1783 SPQYSPASPKYSPTSP 1798
Score = 58.2 bits (139), Expect(2) = 1e-10
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 10/62 (16%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQY 351
YSP+SPTYSP SP G SP YSP+SP++SP++ YSPS P +SPS +QY
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQY 1813
Query: 350 TP 345
+P
Sbjct: 1814 SP 1815
Score = 32.0 bits (71), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1704 TSPCYSPTSPSYSPTSP 1720
Score = 66.6 bits (161), Expect(2) = 3e-10
Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = -3
Query: 527 SIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
S ++ + YSPSS YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + Y
Sbjct: 1664 SNIYSPANAYSPSSANYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-Y 1722
Query: 350 TPQT 339
TP T
Sbjct: 1723 TPVT 1726
Score = 21.9 bits (45), Expect(2) = 3e-10
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
S YS + YSPTSP
Sbjct: 1630 STGYSPSSSGYSPTSP 1645
Score = 63.5 bits (153), Expect(2) = 4e-10
Identities = 29/47 (61%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
YSPSSP YSP+SP + SP Y+ ++P F+P STGYSPS GYSP+S
Sbjct: 1598 YSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSSGYSPTS 1644
Score = 24.6 bits (52), Expect(2) = 4e-10
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y+ +SP
Sbjct: 1576 SPSYSPTSPNYTASSP 1591
Score = 64.3 bits (155), Expect(2) = 6e-10
Identities = 31/52 (59%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
PN YSP+SP+YSPSSP S SP YSP+SP +SP S Y+P P YSP+S
Sbjct: 1682 PNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTS 1733
Score = 23.1 bits (48), Expect(2) = 6e-10
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
+S YS T P YSPT F
Sbjct: 1636 SSSGYSPTSPVYSPTPHF 1653
Score = 55.8 bits (133), Expect(2) = 1e-08
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P S YS +SP YSP+ S S YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1815 PTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 27.3 bits (59), Expect(2) = 1e-08
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSP+SP
Sbjct: 1790 SPKYSPTSPLYSPSSP 1805
Score = 52.0 bits (123), Expect(2) = 2e-08
Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 15/72 (20%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPY------NSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTS 357
P YSP+SP Y+P +P N SP YSP+SP +S + YSP+ P YSP S S
Sbjct: 1710 PTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSPS 1769
Query: 356 --------QYTP 345
QYTP
Sbjct: 1770 YDGSPGSPQYTP 1781
Score = 51.2 bits (121), Expect(2) = 2e-08
Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 20/77 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPS-----------------SPYN--SGVSPDYSPSSPQFSP-STGY 396
P+ S YSP+SP YSP+ SP N S S +YSP+SP +SP S Y
Sbjct: 1635 PSSSGYSPTSPVYSPTPHFQSSPSFAGSGSNIYSPANAYSPSSANYSPNSPSYSPTSPSY 1694
Query: 395 SPSQPGYSPSSTSQYTP 345
SPS P YSP+S Y+P
Sbjct: 1695 SPSSPSYSPTSPC-YSP 1710
Score = 30.8 bits (68), Expect(2) = 2e-08
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS + P+YSPTSP
Sbjct: 1595 SPNYSPSSPNYSPTSP 1610
Score = 30.0 bits (66), Expect(2) = 2e-08
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P YSPTSP
Sbjct: 1697 SSPSYSPTSPCYSPTSP 1713
Score = 52.4 bits (124), Expect(2) = 5e-07
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP YSP+SP S SP +SPS+ Q+SP S YSP+ YSPSST
Sbjct: 1781 PGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNMSIYSPSST 1839
Query: 359 SQYTP 345
+Y+P
Sbjct: 1840 -KYSP 1843
Score = 25.0 bits (53), Expect(2) = 5e-07
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T YSPTSP
Sbjct: 1746 SPAYSQTGVKYSPTSP 1761
Score = 54.7 bits (130), Expect = 4e-06
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ S PN YSP+SP Y+ +SP + +P+++P S +SP S+GYSP+ P YSP+
Sbjct: 1596 PNYSPSSPN---YSPTSPLYASASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTPH 1652
Query: 359 SQYTP 345
Q +P
Sbjct: 1653 FQSSP 1657
Score = 47.8 bits (112), Expect(2) = 9e-06
Identities = 34/77 (44%), Positives = 39/77 (50%), Gaps = 20/77 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGV-----SPD--------------YSPSSPQFSP-STGY 396
P + YSPSS YSP+SP S SP YSPSS +SP S Y
Sbjct: 1628 PQSTGYSPSSSGYSPTSPVYSPTPHFQSSPSFAGSGSNIYSPANAYSPSSANYSPNSPSY 1687
Query: 395 SPSQPGYSPSSTSQYTP 345
SP+ P YSPSS S Y+P
Sbjct: 1688 SPTSPSYSPSSPS-YSP 1703
Score = 25.4 bits (54), Expect(2) = 9e-06
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SPNYS T P Y+ SP
Sbjct: 1601 SSPNYSPTSPLYASASP 1617
[135][TOP]
>UniRef100_B4PY98 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4PY98_DROYA
Length = 1889
Score = 62.0 bits (149), Expect(2) = 8e-12
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + V+P YSP+SP +S S YSP+ P YS + +Y+P
Sbjct: 1703 PTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGV-KYSP 1758
Score = 32.0 bits (71), Expect(2) = 8e-12
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + PSYSPTSP
Sbjct: 1690 TSPSYSPSSPSYSPTSP 1706
Score = 59.7 bits (143), Expect(2) = 3e-11
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P Y+P SP YSP+SP S SP YSPSSPQ SPS YSP+ YS +S +Y+P
Sbjct: 1774 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATS-PRYSP 1829
Score = 32.3 bits (72), Expect(2) = 3e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ PSYSPTSP
Sbjct: 1718 TSPNYTPVTPSYSPTSP 1734
Score = 63.9 bits (154), Expect(2) = 4e-11
Identities = 30/53 (56%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--TGYSPSQPGYSPSS 363
PN+SIYSPSS YSP+SP + + +YSP+SP +SP+ + YSP+ P YSPSS
Sbjct: 1829 PNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSS 1881
Score = 27.7 bits (60), Expect(2) = 4e-11
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P YSPTSP
Sbjct: 1783 SPQYSPASPKYSPTSP 1798
Score = 58.2 bits (139), Expect(2) = 1e-10
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 10/62 (16%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQY 351
YSP+SPTYSP SP G SP YSP+SP++SP++ YSPS P +SPS +QY
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQY 1813
Query: 350 TP 345
+P
Sbjct: 1814 SP 1815
Score = 32.0 bits (71), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1704 TSPCYSPTSPSYSPTSP 1720
Score = 65.1 bits (157), Expect(2) = 1e-10
Identities = 32/56 (57%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 336
YSPSSP YSP+SP + SP Y+ ++P F+P STGYSPS GYSP+S Y+P N
Sbjct: 1598 YSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSSGYSPTS-PVYSPTPN 1652
Score = 24.6 bits (52), Expect(2) = 1e-10
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y+ +SP
Sbjct: 1576 SPSYSPTSPNYTASSP 1591
Score = 65.5 bits (158), Expect(2) = 3e-10
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
YSPSS YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1673 YSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1726
Score = 23.1 bits (48), Expect(2) = 3e-10
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
+S YS T P YSPT F
Sbjct: 1636 SSSGYSPTSPVYSPTPNF 1653
Score = 65.5 bits (158), Expect = 3e-09
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P S PN YSP+SP+YSPSSP S SP YSP+SP +SP S Y+P P YSP+S
Sbjct: 1675 PSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTS 1733
Score = 55.8 bits (133), Expect(2) = 1e-08
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P S YS +SP YSP+ S S YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1815 PTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 27.3 bits (59), Expect(2) = 1e-08
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSP+SP
Sbjct: 1790 SPKYSPTSPLYSPSSP 1805
Score = 52.0 bits (123), Expect(2) = 2e-08
Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 15/72 (20%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPY------NSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTS 357
P YSP+SP Y+P +P N SP YSP+SP +S + YSP+ P YSP S S
Sbjct: 1710 PTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSPS 1769
Query: 356 --------QYTP 345
QYTP
Sbjct: 1770 YDGSPGSPQYTP 1781
Score = 30.0 bits (66), Expect(2) = 2e-08
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P YSPTSP
Sbjct: 1697 SSPSYSPTSPCYSPTSP 1713
Score = 50.8 bits (120), Expect(2) = 3e-08
Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 20/77 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPS-----------------SPYN--SGVSPDYSPSSPQFSP-STGY 396
P+ S YSP+SP YSP+ SP N S S +YSP+SP +SP S Y
Sbjct: 1635 PSSSGYSPTSPVYSPTPNFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSY 1694
Query: 395 SPSQPGYSPSSTSQYTP 345
SPS P YSP+S Y+P
Sbjct: 1695 SPSSPSYSPTSPC-YSP 1710
Score = 30.8 bits (68), Expect(2) = 3e-08
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS + P+YSPTSP
Sbjct: 1595 SPNYSPSSPNYSPTSP 1610
Score = 52.4 bits (124), Expect(2) = 5e-07
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP YSP+SP S SP +SPS+ Q+SP S YSP+ YSPSST
Sbjct: 1781 PGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNMSIYSPSST 1839
Query: 359 SQYTP 345
+Y+P
Sbjct: 1840 -KYSP 1843
Score = 25.0 bits (53), Expect(2) = 5e-07
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T YSPTSP
Sbjct: 1746 SPAYSQTGVKYSPTSP 1761
Score = 55.5 bits (132), Expect = 3e-06
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ S PN YSP+SP Y+ +SP + +P+++P S +SP S+GYSP+ P YSP+
Sbjct: 1596 PNYSPSSPN---YSPTSPLYASASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTPN 1652
Query: 359 SQYTP 345
Q +P
Sbjct: 1653 FQSSP 1657
Score = 47.8 bits (112), Expect(2) = 9e-06
Identities = 34/77 (44%), Positives = 39/77 (50%), Gaps = 20/77 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPY-----NSGVSPD--------------YSPSSPQFSP-STGY 396
P + YSPSS YSP+SP N SP YSPSS +SP S Y
Sbjct: 1628 PQSTGYSPSSSGYSPTSPVYSPTPNFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSY 1687
Query: 395 SPSQPGYSPSSTSQYTP 345
SP+ P YSPSS S Y+P
Sbjct: 1688 SPTSPSYSPSSPS-YSP 1703
Score = 25.4 bits (54), Expect(2) = 9e-06
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SPNYS T P Y+ SP
Sbjct: 1601 SSPNYSPTSPLYASASP 1617
[136][TOP]
>UniRef100_B3MQ29 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3MQ29_DROAN
Length = 1889
Score = 62.0 bits (149), Expect(2) = 8e-12
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + V+P YSP+SP +S S YSP+ P YS + +Y+P
Sbjct: 1703 PTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGV-KYSP 1758
Score = 32.0 bits (71), Expect(2) = 8e-12
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + PSYSPTSP
Sbjct: 1690 TSPSYSPSSPSYSPTSP 1706
Score = 59.7 bits (143), Expect(2) = 3e-11
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P Y+P SP YSP+SP S SP YSPSSPQ SPS YSP+ YS +S +Y+P
Sbjct: 1774 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATS-PRYSP 1829
Score = 32.3 bits (72), Expect(2) = 3e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ PSYSPTSP
Sbjct: 1718 TSPNYTPVTPSYSPTSP 1734
Score = 63.9 bits (154), Expect(2) = 4e-11
Identities = 30/53 (56%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--TGYSPSQPGYSPSS 363
PN+SIYSPSS YSP+SP + + +YSP+SP +SP+ + YSP+ P YSPSS
Sbjct: 1829 PNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSS 1881
Score = 27.7 bits (60), Expect(2) = 4e-11
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P YSPTSP
Sbjct: 1783 SPQYSPASPKYSPTSP 1798
Score = 58.2 bits (139), Expect(2) = 1e-10
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 10/62 (16%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQY 351
YSP+SPTYSP SP G SP YSP+SP++SP++ YSPS P +SPS +QY
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQY 1813
Query: 350 TP 345
+P
Sbjct: 1814 SP 1815
Score = 32.0 bits (71), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1704 TSPCYSPTSPSYSPTSP 1720
Score = 65.1 bits (157), Expect(2) = 1e-10
Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 336
YSPSSP YSP+SP + SP Y+ ++P F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1598 YSPSSPNYSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSSGYSPTS-PVYSPTSN 1652
Score = 24.6 bits (52), Expect(2) = 1e-10
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y+ +SP
Sbjct: 1576 SPSYSPTSPNYTASSP 1591
Score = 65.5 bits (158), Expect(2) = 2e-10
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
YSPSS YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1673 YSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1726
Score = 23.9 bits (50), Expect(2) = 2e-10
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
+S YS T P YSPTS +
Sbjct: 1636 SSSGYSPTSPVYSPTSNY 1653
Score = 65.5 bits (158), Expect = 3e-09
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P S PN YSP+SP+YSPSSP S SP YSP+SP +SP S Y+P P YSP+S
Sbjct: 1675 PSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTS 1733
Score = 53.9 bits (128), Expect(2) = 4e-09
Identities = 33/77 (42%), Positives = 41/77 (53%), Gaps = 20/77 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVS-------------------PDYSPSSPQFSP-STGY 396
P+ S YSP+SP YSP+S Y S S +YSP+SP +SP S Y
Sbjct: 1635 PSSSGYSPTSPVYSPTSNYQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSPSYSPTSPSY 1694
Query: 395 SPSQPGYSPSSTSQYTP 345
SPS P YSP+S Y+P
Sbjct: 1695 SPSSPSYSPTSPC-YSP 1710
Score = 30.8 bits (68), Expect(2) = 4e-09
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS + P+YSPTSP
Sbjct: 1595 SPNYSPSSPNYSPTSP 1610
Score = 55.8 bits (133), Expect(2) = 1e-08
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P S YS +SP YSP+ S S YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1815 PTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 27.3 bits (59), Expect(2) = 1e-08
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSP+SP
Sbjct: 1790 SPKYSPTSPLYSPSSP 1805
Score = 52.0 bits (123), Expect(2) = 2e-08
Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 15/72 (20%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPY------NSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTS 357
P YSP+SP Y+P +P N SP YSP+SP +S + YSP+ P YSP S S
Sbjct: 1710 PTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSPS 1769
Query: 356 --------QYTP 345
QYTP
Sbjct: 1770 YDGSPGSPQYTP 1781
Score = 30.0 bits (66), Expect(2) = 2e-08
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P YSPTSP
Sbjct: 1697 SSPSYSPTSPCYSPTSP 1713
Score = 52.4 bits (124), Expect(2) = 5e-07
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP YSP+SP S SP +SPS+ Q+SP S YSP+ YSPSST
Sbjct: 1781 PGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNMSIYSPSST 1839
Query: 359 SQYTP 345
+Y+P
Sbjct: 1840 -KYSP 1843
Score = 25.0 bits (53), Expect(2) = 5e-07
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T YSPTSP
Sbjct: 1746 SPAYSQTGVKYSPTSP 1761
Score = 57.4 bits (137), Expect = 7e-07
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ S PN YSP+SP Y+ +SP + +P+++P S +SP S+GYSP+ P YSP+S
Sbjct: 1596 PNYSPSSPN---YSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSN 1652
Query: 359 SQYTP 345
Q +P
Sbjct: 1653 YQSSP 1657
Score = 47.8 bits (112), Expect(2) = 3e-06
Identities = 33/77 (42%), Positives = 38/77 (49%), Gaps = 20/77 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVS-------------------PDYSPSSPQFSP-STGY 396
P + YSPSS YSP+SP S S YSPSS +SP S Y
Sbjct: 1628 PQSTGYSPSSSGYSPTSPVYSPTSNYQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSPSY 1687
Query: 395 SPSQPGYSPSSTSQYTP 345
SP+ P YSPSS S Y+P
Sbjct: 1688 SPTSPSYSPSSPS-YSP 1703
Score = 27.3 bits (59), Expect(2) = 3e-06
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SPNYS T P Y+ TSP
Sbjct: 1601 SSPNYSPTSPLYATTSP 1617
[137][TOP]
>UniRef100_B4IK28 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia
RepID=B4IK28_DROSE
Length = 1887
Score = 62.0 bits (149), Expect(2) = 8e-12
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + V+P YSP+SP +S S YSP+ P YS + +Y+P
Sbjct: 1701 PTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGV-KYSP 1756
Score = 32.0 bits (71), Expect(2) = 8e-12
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + PSYSPTSP
Sbjct: 1688 TSPSYSPSSPSYSPTSP 1704
Score = 59.7 bits (143), Expect(2) = 3e-11
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P Y+P SP YSP+SP S SP YSPSSPQ SPS YSP+ YS +S +Y+P
Sbjct: 1772 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATS-PRYSP 1827
Score = 32.3 bits (72), Expect(2) = 3e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ PSYSPTSP
Sbjct: 1716 TSPNYTPVTPSYSPTSP 1732
Score = 63.9 bits (154), Expect(2) = 4e-11
Identities = 30/53 (56%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--TGYSPSQPGYSPSS 363
PN+SIYSPSS YSP+SP + + +YSP+SP +SP+ + YSP+ P YSPSS
Sbjct: 1827 PNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSS 1879
Score = 27.7 bits (60), Expect(2) = 4e-11
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P YSPTSP
Sbjct: 1781 SPQYSPASPKYSPTSP 1796
Score = 65.5 bits (158), Expect(2) = 8e-11
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
YSPSS YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1671 YSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1724
Score = 25.0 bits (53), Expect(2) = 8e-11
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
+S YS T P YSPT+ F
Sbjct: 1634 SSSGYSPTSPGYSPTAQF 1651
Score = 58.2 bits (139), Expect(2) = 1e-10
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 10/62 (16%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQY 351
YSP+SPTYSP SP G SP YSP+SP++SP++ YSPS P +SPS +QY
Sbjct: 1754 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQY 1811
Query: 350 TP 345
+P
Sbjct: 1812 SP 1813
Score = 32.0 bits (71), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1702 TSPCYSPTSPSYSPTSP 1718
Score = 67.4 bits (163), Expect = 7e-10
Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSP--- 369
P S PN YSP+SP+YSPSSP S SP YSP+SP +SP S Y+P P YSP
Sbjct: 1673 PSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSP 1732
Query: 368 --SSTSQYTPQTNDKDERG 318
S++ QY+P + + G
Sbjct: 1733 NYSASPQYSPASPAYSQTG 1751
Score = 53.9 bits (128), Expect(2) = 7e-09
Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 16/73 (21%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS------TG--YSPSQPGYSPSST 360
P YSP+SP Y+P +P S SP+YS +SPQ+SP+ TG YSP+ P YSP S
Sbjct: 1708 PTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSPASPAYSQTGVKYSPTSPTYSPPSP 1766
Query: 359 S--------QYTP 345
S QYTP
Sbjct: 1767 SYDGSPGSPQYTP 1779
Score = 30.0 bits (66), Expect(2) = 7e-09
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P YSPTSP
Sbjct: 1695 SSPSYSPTSPCYSPTSP 1711
Score = 55.8 bits (133), Expect(2) = 1e-08
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P S YS +SP YSP+ S S YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1813 PTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1870
Score = 27.3 bits (59), Expect(2) = 1e-08
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSP+SP
Sbjct: 1788 SPKYSPTSPLYSPSSP 1803
Score = 50.8 bits (120), Expect(2) = 3e-08
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 20/77 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVS-------------------PDYSPSSPQFSP-STGY 396
P+ S YSP+SP YSP++ + S S +YSP+SP +SP S Y
Sbjct: 1633 PSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSY 1692
Query: 395 SPSQPGYSPSSTSQYTP 345
SPS P YSP+S Y+P
Sbjct: 1693 SPSSPSYSPTSPC-YSP 1708
Score = 30.8 bits (68), Expect(2) = 3e-08
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS + P+YSPTSP
Sbjct: 1595 SPNYSPSSPNYSPTSP 1610
Score = 52.4 bits (124), Expect(2) = 5e-07
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP YSP+SP S SP +SPS+ Q+SP S YSP+ YSPSST
Sbjct: 1779 PGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNMSIYSPSST 1837
Query: 359 SQYTP 345
+Y+P
Sbjct: 1838 -KYSP 1841
Score = 25.0 bits (53), Expect(2) = 5e-07
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T YSPTSP
Sbjct: 1744 SPAYSQTGVKYSPTSP 1759
[138][TOP]
>UniRef100_A9UNH9 DNA-directed RNA polymerase n=1 Tax=Drosophila melanogaster
RepID=A9UNH9_DROME
Length = 1887
Score = 62.0 bits (149), Expect(2) = 8e-12
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + V+P YSP+SP +S S YSP+ P YS + +Y+P
Sbjct: 1701 PTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGV-KYSP 1756
Score = 32.0 bits (71), Expect(2) = 8e-12
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + PSYSPTSP
Sbjct: 1688 TSPSYSPSSPSYSPTSP 1704
Score = 59.7 bits (143), Expect(2) = 3e-11
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P Y+P SP YSP+SP S SP YSPSSPQ SPS YSP+ YS +S +Y+P
Sbjct: 1772 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATS-PRYSP 1827
Score = 32.3 bits (72), Expect(2) = 3e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ PSYSPTSP
Sbjct: 1716 TSPNYTPVTPSYSPTSP 1732
Score = 58.2 bits (139), Expect(2) = 1e-10
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 10/62 (16%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQY 351
YSP+SPTYSP SP G SP YSP+SP++SP++ YSPS P +SPS +QY
Sbjct: 1754 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQY 1811
Query: 350 TP 345
+P
Sbjct: 1812 SP 1813
Score = 32.0 bits (71), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1702 TSPCYSPTSPSYSPTSP 1718
Score = 62.0 bits (149), Expect(2) = 1e-10
Identities = 29/53 (54%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--TGYSPSQPGYSPSS 363
PN+SIYSPSS YSP+SP + + +YSP+ P +SP+ + YSP+ P YSPSS
Sbjct: 1827 PNMSIYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAPSHYSPTSPAYSPSS 1879
Score = 27.7 bits (60), Expect(2) = 1e-10
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P YSPTSP
Sbjct: 1781 SPQYSPASPKYSPTSP 1796
Score = 65.5 bits (158), Expect(2) = 3e-10
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
YSPSS YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1671 YSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1724
Score = 23.1 bits (48), Expect(2) = 3e-10
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
+S YS T P YSPT F
Sbjct: 1634 SSSGYSPTSPVYSPTVQF 1651
Score = 67.4 bits (163), Expect = 7e-10
Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSP--- 369
P S PN YSP+SP+YSPSSP S SP YSP+SP +SP S Y+P P YSP
Sbjct: 1673 PSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSP 1732
Query: 368 --SSTSQYTPQTNDKDERG 318
S++ QY+P + + G
Sbjct: 1733 NYSASPQYSPASPAYSQTG 1751
Score = 53.9 bits (128), Expect(2) = 7e-09
Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 16/73 (21%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS------TG--YSPSQPGYSPSST 360
P YSP+SP Y+P +P S SP+YS +SPQ+SP+ TG YSP+ P YSP S
Sbjct: 1708 PTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSPASPAYSQTGVKYSPTSPTYSPPSP 1766
Query: 359 S--------QYTP 345
S QYTP
Sbjct: 1767 SYDGSPGSPQYTP 1779
Score = 30.0 bits (66), Expect(2) = 7e-09
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P YSPTSP
Sbjct: 1695 SSPSYSPTSPCYSPTSP 1711
Score = 55.5 bits (132), Expect(2) = 1e-08
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P S YS +SP YSP+ S S YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1813 PTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAPSHYSP 1870
Score = 27.3 bits (59), Expect(2) = 1e-08
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSP+SP
Sbjct: 1788 SPKYSPTSPLYSPSSP 1803
Score = 50.8 bits (120), Expect(2) = 3e-08
Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 20/77 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPS-----------------SPYN--SGVSPDYSPSSPQFSP-STGY 396
P+ S YSP+SP YSP+ SP N S S +YSP+SP +SP S Y
Sbjct: 1633 PSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSY 1692
Query: 395 SPSQPGYSPSSTSQYTP 345
SPS P YSP+S Y+P
Sbjct: 1693 SPSSPSYSPTSPC-YSP 1708
Score = 30.8 bits (68), Expect(2) = 3e-08
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS + P+YSPTSP
Sbjct: 1595 SPNYSPSSPNYSPTSP 1610
Score = 52.4 bits (124), Expect(2) = 5e-07
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP YSP+SP S SP +SPS+ Q+SP S YSP+ YSPSST
Sbjct: 1779 PGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNMSIYSPSST 1837
Query: 359 SQYTP 345
+Y+P
Sbjct: 1838 -KYSP 1841
Score = 25.0 bits (53), Expect(2) = 5e-07
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T YSPTSP
Sbjct: 1744 SPAYSQTGVKYSPTSP 1759
[139][TOP]
>UniRef100_P04052 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Drosophila
melanogaster RepID=RPB1_DROME
Length = 1887
Score = 62.0 bits (149), Expect(2) = 8e-12
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + V+P YSP+SP +S S YSP+ P YS + +Y+P
Sbjct: 1701 PTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGV-KYSP 1756
Score = 32.0 bits (71), Expect(2) = 8e-12
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + PSYSPTSP
Sbjct: 1688 TSPSYSPSSPSYSPTSP 1704
Score = 59.7 bits (143), Expect(2) = 3e-11
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P Y+P SP YSP+SP S SP YSPSSPQ SPS YSP+ YS +S +Y+P
Sbjct: 1772 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATS-PRYSP 1827
Score = 32.3 bits (72), Expect(2) = 3e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ PSYSPTSP
Sbjct: 1716 TSPNYTPVTPSYSPTSP 1732
Score = 63.9 bits (154), Expect(2) = 4e-11
Identities = 30/53 (56%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--TGYSPSQPGYSPSS 363
PN+SIYSPSS YSP+SP + + +YSP+SP +SP+ + YSP+ P YSPSS
Sbjct: 1827 PNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSS 1879
Score = 27.7 bits (60), Expect(2) = 4e-11
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P YSPTSP
Sbjct: 1781 SPQYSPASPKYSPTSP 1796
Score = 58.2 bits (139), Expect(2) = 1e-10
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 10/62 (16%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQY 351
YSP+SPTYSP SP G SP YSP+SP++SP++ YSPS P +SPS +QY
Sbjct: 1754 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQY 1811
Query: 350 TP 345
+P
Sbjct: 1812 SP 1813
Score = 32.0 bits (71), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1702 TSPCYSPTSPSYSPTSP 1718
Score = 65.5 bits (158), Expect(2) = 3e-10
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
YSPSS YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1671 YSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1724
Score = 23.1 bits (48), Expect(2) = 3e-10
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
+S YS T P YSPT F
Sbjct: 1634 SSSGYSPTSPVYSPTVQF 1651
Score = 67.4 bits (163), Expect = 7e-10
Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSP--- 369
P S PN YSP+SP+YSPSSP S SP YSP+SP +SP S Y+P P YSP
Sbjct: 1673 PSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSP 1732
Query: 368 --SSTSQYTPQTNDKDERG 318
S++ QY+P + + G
Sbjct: 1733 NYSASPQYSPASPAYSQTG 1751
Score = 53.9 bits (128), Expect(2) = 7e-09
Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 16/73 (21%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS------TG--YSPSQPGYSPSST 360
P YSP+SP Y+P +P S SP+YS +SPQ+SP+ TG YSP+ P YSP S
Sbjct: 1708 PTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSPASPAYSQTGVKYSPTSPTYSPPSP 1766
Query: 359 S--------QYTP 345
S QYTP
Sbjct: 1767 SYDGSPGSPQYTP 1779
Score = 30.0 bits (66), Expect(2) = 7e-09
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P YSPTSP
Sbjct: 1695 SSPSYSPTSPCYSPTSP 1711
Score = 55.8 bits (133), Expect(2) = 1e-08
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P S YS +SP YSP+ S S YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1813 PTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1870
Score = 27.3 bits (59), Expect(2) = 1e-08
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSP+SP
Sbjct: 1788 SPKYSPTSPLYSPSSP 1803
Score = 50.8 bits (120), Expect(2) = 3e-08
Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 20/77 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPS-----------------SPYN--SGVSPDYSPSSPQFSP-STGY 396
P+ S YSP+SP YSP+ SP N S S +YSP+SP +SP S Y
Sbjct: 1633 PSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSY 1692
Query: 395 SPSQPGYSPSSTSQYTP 345
SPS P YSP+S Y+P
Sbjct: 1693 SPSSPSYSPTSPC-YSP 1708
Score = 30.8 bits (68), Expect(2) = 3e-08
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS + P+YSPTSP
Sbjct: 1595 SPNYSPSSPNYSPTSP 1610
Score = 52.4 bits (124), Expect(2) = 5e-07
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP YSP+SP S SP +SPS+ Q+SP S YSP+ YSPSST
Sbjct: 1779 PGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNMSIYSPSST 1837
Query: 359 SQYTP 345
+Y+P
Sbjct: 1838 -KYSP 1841
Score = 25.0 bits (53), Expect(2) = 5e-07
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T YSPTSP
Sbjct: 1744 SPAYSQTGVKYSPTSP 1759
[140][TOP]
>UniRef100_Q5KGG3 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q5KGG3_CRYNE
Length = 1786
Score = 62.8 bits (151), Expect(2) = 8e-12
Identities = 29/47 (61%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
YSP+SP +SP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S
Sbjct: 1702 YSPTSPQFSPTSPTYSPASPAYSPTSPQYSPTSPAYSPTSPAYSPTS 1748
Score = 31.2 bits (69), Expect(2) = 8e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1662 TSPQYSPTSPRYSPTSP 1678
Score = 62.4 bits (150), Expect(2) = 1e-11
Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 506 SIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 351
S YSP+SP YSP+SP SP YSP+SP++SP S +SP+ P YSP+S + +
Sbjct: 1643 SPYSPTSPAYSPTSPMGGITSPQYSPTSPRYSPTSPAFSPTSPSYSPTSPAPF 1695
Score = 30.8 bits (68), Expect(2) = 1e-11
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1594 TSPAYSPTSPQYSPTSP 1610
Score = 60.1 bits (144), Expect(2) = 6e-11
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P +SP+SPTYSP+SP S SP YSP+SP +SP S YSP+ P Y ++ + T Q
Sbjct: 1704 PTSPQFSPTSPTYSPASPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYGGAAPNGGTAQQ 1763
Query: 338 NDKDER 321
+ R
Sbjct: 1764 QNGQAR 1769
Score = 30.8 bits (68), Expect(2) = 6e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP +S T PSYSPTSP
Sbjct: 1676 TSPAFSPTSPSYSPTSP 1692
Score = 60.1 bits (144), Expect(2) = 6e-10
Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 9/66 (13%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNS--------GVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P YSP+SP +SP+SP S SP YSP+SPQFSP S YSP+ P YSP+S
Sbjct: 1668 PTSPRYSPTSPAFSPTSPSYSPTSPAPFQATSPRYSPTSPQFSPTSPTYSPASPAYSPTS 1727
Query: 362 TSQYTP 345
QY+P
Sbjct: 1728 -PQYSP 1732
Score = 27.3 bits (59), Expect(2) = 6e-10
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP++S + P+YSP SP
Sbjct: 1615 TSPSFSPSSPTYSPASP 1631
Score = 57.8 bits (138), Expect(2) = 4e-09
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 19/71 (26%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-------------STGYSPSQPGYSPSS- 363
YSP+SP YSP+SP S SP +SPSSP +SP ++ YSP+ P YSP+S
Sbjct: 1598 YSPTSPQYSPTSPQFSPTSPSFSPSSPTYSPASPAYGGAGAGNRASPYSPTSPAYSPTSP 1657
Query: 362 -----TSQYTP 345
+ QY+P
Sbjct: 1658 MGGITSPQYSP 1668
Score = 26.9 bits (58), Expect(2) = 4e-09
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
TSP ++ T P+YSPTSPF
Sbjct: 1558 TSP-FAVTSPAYSPTSPF 1574
Score = 47.8 bits (112), Expect(2) = 3e-07
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQF---SPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP + SP+ G + G + Q P
Sbjct: 1711 PTSPTYSPASPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYGGAAPNGGTAQQQNGQARP 1770
Score = 30.4 bits (67), Expect(2) = 3e-07
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P++SPTSP
Sbjct: 1669 TSPRYSPTSPAFSPTSP 1685
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 536 PDISIVFPNISIYSPS-----SPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGY 375
P S P+ S SP+ SP YSP+SP S SP YSP+SP +SP S YSP+ P Y
Sbjct: 1678 PAFSPTSPSYSPTSPAPFQATSPRYSPTSPQFSPTSPTYSPASPAYSPTSPQYSPTSPAY 1737
Query: 374 SPSSTSQYTP 345
SP+S + Y+P
Sbjct: 1738 SPTSPA-YSP 1746
Score = 53.5 bits (127), Expect = 1e-05
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 5/57 (8%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGY----SPSSTSQYTP 345
Y +SP YSP+SP S SP +SP+SP FSPS+ YSP+ P Y + + S Y+P
Sbjct: 1591 YGATSPAYSPTSPQYSPTSPQFSPTSPSFSPSSPTYSPASPAYGGAGAGNRASPYSP 1647
[141][TOP]
>UniRef100_B4R347 RNA polymerase II 215kD subunit n=1 Tax=Drosophila simulans
RepID=B4R347_DROSI
Length = 552
Score = 62.0 bits (149), Expect(2) = 8e-12
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + V+P YSP+SP +S S YSP+ P YS + +Y+P
Sbjct: 366 PTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGV-KYSP 421
Score = 32.0 bits (71), Expect(2) = 8e-12
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + PSYSPTSP
Sbjct: 353 TSPSYSPSSPSYSPTSP 369
Score = 59.7 bits (143), Expect(2) = 3e-11
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P Y+P SP YSP+SP S SP YSPSSPQ SPS YSP+ YS +S +Y+P
Sbjct: 437 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATS-PRYSP 492
Score = 32.3 bits (72), Expect(2) = 3e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ PSYSPTSP
Sbjct: 381 TSPNYTPVTPSYSPTSP 397
Score = 63.5 bits (153), Expect(2) = 5e-11
Identities = 30/53 (56%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--TGYSPSQPGYSPSS 363
PN+SIYSPSS YSP+SP + + +YSP+SP +SP+ + YSP P YSPSS
Sbjct: 492 PNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKSPAYSPSS 544
Score = 27.7 bits (60), Expect(2) = 5e-11
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P YSPTSP
Sbjct: 446 SPQYSPASPKYSPTSP 461
Score = 65.5 bits (158), Expect(2) = 8e-11
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
YSPSS YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 336 YSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 389
Score = 25.0 bits (53), Expect(2) = 8e-11
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
+S YS T P YSPT+ F
Sbjct: 299 SSSGYSPTSPGYSPTAQF 316
Score = 58.2 bits (139), Expect(2) = 1e-10
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 10/62 (16%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQY 351
YSP+SPTYSP SP G SP YSP+SP++SP++ YSPS P +SPS +QY
Sbjct: 419 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQY 476
Query: 350 TP 345
+P
Sbjct: 477 SP 478
Score = 32.0 bits (71), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 367 TSPCYSPTSPSYSPTSP 383
Score = 67.4 bits (163), Expect = 7e-10
Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSP--- 369
P S PN YSP+SP+YSPSSP S SP YSP+SP +SP S Y+P P YSP
Sbjct: 338 PSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSP 397
Query: 368 --SSTSQYTPQTNDKDERG 318
S++ QY+P + + G
Sbjct: 398 NYSASPQYSPASPAYSQTG 416
Score = 56.6 bits (135), Expect(2) = 7e-09
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 339
P S YS +SP YSP+ S S YSP+SP ++P+ YSP+ P YSP++ S Y+P++
Sbjct: 478 PTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKS 537
Score = 53.9 bits (128), Expect(2) = 7e-09
Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 16/73 (21%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS------TG--YSPSQPGYSPSST 360
P YSP+SP Y+P +P S SP+YS +SPQ+SP+ TG YSP+ P YSP S
Sbjct: 373 PTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSPASPAYSQTGVKYSPTSPTYSPPSP 431
Query: 359 S--------QYTP 345
S QYTP
Sbjct: 432 SYDGSPGSPQYTP 444
Score = 30.0 bits (66), Expect(2) = 7e-09
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P YSPTSP
Sbjct: 360 SSPSYSPTSPCYSPTSP 376
Score = 27.3 bits (59), Expect(2) = 7e-09
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSP+SP
Sbjct: 453 SPKYSPTSPLYSPSSP 468
Score = 50.8 bits (120), Expect(2) = 3e-08
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 20/77 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVS-------------------PDYSPSSPQFSP-STGY 396
P+ S YSP+SP YSP++ + S S +YSP+SP +SP S Y
Sbjct: 298 PSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSY 357
Query: 395 SPSQPGYSPSSTSQYTP 345
SPS P YSP+S Y+P
Sbjct: 358 SPSSPSYSPTSPC-YSP 373
Score = 30.8 bits (68), Expect(2) = 3e-08
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS + P+YSPTSP
Sbjct: 260 SPNYSPSSPNYSPTSP 275
Score = 52.4 bits (124), Expect(2) = 6e-07
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP YSP+SP S SP +SPS+ Q+SP S YSP+ YSPSST
Sbjct: 444 PGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNMSIYSPSST 502
Query: 359 SQYTP 345
+Y+P
Sbjct: 503 -KYSP 506
Score = 25.0 bits (53), Expect(2) = 6e-07
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T YSPTSP
Sbjct: 409 SPAYSQTGVKYSPTSP 424
[142][TOP]
>UniRef100_B4MAN9 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4MAN9_DROVI
Length = 1889
Score = 63.9 bits (154), Expect(2) = 1e-11
Identities = 30/53 (56%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--TGYSPSQPGYSPSS 363
PN+SIYSPSS YSP+SP + + +YSP+SP +SP+ + YSP+ P YSPSS
Sbjct: 1829 PNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSS 1881
Score = 29.6 bits (65), Expect(2) = 1e-11
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSPTSP
Sbjct: 1783 SPQYSPTSPKYSPTSP 1798
Score = 59.7 bits (143), Expect(2) = 3e-11
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P Y+P SP YSP+SP S SP YSPSSPQ SPS YSP+ YS +S +Y+P
Sbjct: 1774 PGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATS-PRYSP 1829
Score = 32.3 bits (72), Expect(2) = 3e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ PSYSPTSP
Sbjct: 1718 TSPNYTPATPSYSPTSP 1734
Score = 60.5 bits (145), Expect(2) = 8e-11
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + +P YSP+SP +S S YSP+ P YS + +Y+P
Sbjct: 1703 PTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGV-KYSP 1758
Score = 30.0 bits (66), Expect(2) = 8e-11
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS + PSYSPTSP
Sbjct: 1691 SPSYSPSSPSYSPTSP 1706
Score = 62.4 bits (150), Expect(2) = 1e-10
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQTNDKDE 324
YSPSSP+YSP+SP S SP YSP+SP ++P+T YSP+ P YS S Y+P + +
Sbjct: 1694 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS--PHYSPASPAYSQ 1751
Query: 323 RG 318
G
Sbjct: 1752 TG 1753
Score = 58.2 bits (139), Expect(2) = 1e-10
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 10/62 (16%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQY 351
YSP+SPTYSP SP G SP YSP+SP++SP++ YSPS P +SPS +QY
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPS--NQY 1813
Query: 350 TP 345
+P
Sbjct: 1814 SP 1815
Score = 32.0 bits (71), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1704 TSPCYSPTSPSYSPTSP 1720
Score = 27.7 bits (60), Expect(2) = 1e-10
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS PSYSP+SP
Sbjct: 1684 SPSYSPMSPSYSPSSP 1699
Score = 63.2 bits (152), Expect(2) = 4e-10
Identities = 33/55 (60%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
YSPSS YS +SP S +SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1673 YSPSSSNYSSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1726
Score = 25.0 bits (53), Expect(2) = 4e-10
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
+S YS T P YSPTS F
Sbjct: 1636 SSSGYSPTSPVYSPTSNF 1653
Score = 62.0 bits (149), Expect(2) = 1e-09
Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 336
YSPSSP YSP+SP + S Y+ ++P F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1598 YSPSSPNYSPTSPLYTATSLRYASATPNFNPQSTGYSPSSSGYSPTS-PVYSPTSN 1652
Score = 24.6 bits (52), Expect(2) = 1e-09
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y+ +SP
Sbjct: 1576 SPSYSPTSPNYTASSP 1591
Score = 55.8 bits (133), Expect(2) = 3e-09
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P S YS +SP YSP+ S S YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1815 PTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 29.3 bits (64), Expect(2) = 3e-09
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSP+SP
Sbjct: 1789 TSPKYSPTSPLYSPSSP 1805
Score = 53.1 bits (126), Expect(2) = 1e-08
Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 15/72 (20%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPY------NSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTS 357
P YSP+SP Y+P++P N SP YSP+SP +S + YSP+ P YSP S S
Sbjct: 1710 PTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSPS 1769
Query: 356 --------QYTP 345
QYTP
Sbjct: 1770 YDGSPGSPQYTP 1781
Score = 30.0 bits (66), Expect(2) = 1e-08
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P YSPTSP
Sbjct: 1697 SSPSYSPTSPCYSPTSP 1713
Score = 56.2 bits (134), Expect(2) = 1e-08
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P+ YSP+SP YSP+SP S SP+Y+P++P +SP++ + P YSP+S
Sbjct: 1696 PSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPAS 1746
Score = 26.6 bits (57), Expect(2) = 1e-08
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+S NYS PSYSP SP
Sbjct: 1676 SSSNYSSNSPSYSPMSP 1692
Score = 62.8 bits (151), Expect = 2e-08
Identities = 32/59 (54%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P S N YSP SP+YSPSSP S SP YSP+SP +SP S Y+P+ P YSP+S
Sbjct: 1675 PSSSNYSSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTS 1733
Score = 49.3 bits (116), Expect(2) = 9e-08
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 20/77 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVS-------------------PDYSPSSPQFSP-STGY 396
P+ S YSP+SP YSP+S + S S +YS +SP +SP S Y
Sbjct: 1635 PSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSSNSPSYSPMSPSY 1694
Query: 395 SPSQPGYSPSSTSQYTP 345
SPS P YSP+S Y+P
Sbjct: 1695 SPSSPSYSPTSPC-YSP 1710
Score = 30.8 bits (68), Expect(2) = 9e-08
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS + P+YSPTSP
Sbjct: 1595 SPNYSPSSPNYSPTSP 1610
Score = 52.4 bits (124), Expect(2) = 5e-07
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP YSP+SP S SP +SPS+ Q+SP S YSP+ YSPSST
Sbjct: 1781 PGSPQYSPTSPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNMSIYSPSST 1839
Query: 359 SQYTP 345
+Y+P
Sbjct: 1840 -KYSP 1843
Score = 25.0 bits (53), Expect(2) = 5e-07
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T YSPTSP
Sbjct: 1746 SPAYSQTGVKYSPTSP 1761
Score = 53.5 bits (127), Expect = 1e-05
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ S PN YSP+SP Y+ +S + +P+++P S +SP S+GYSP+ P YSP+S
Sbjct: 1596 PNYSPSSPN---YSPTSPLYTATSLRYASATPNFNPQSTGYSPSSSGYSPTSPVYSPTSN 1652
Query: 359 SQYTP 345
Q +P
Sbjct: 1653 FQSSP 1657
[143][TOP]
>UniRef100_C6F0A2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0A2_PLAFA
Length = 223
Score = 62.0 bits (149), Expect(2) = 1e-11
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 70 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 121
Score = 31.6 bits (70), Expect(2) = 1e-11
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 43 TSPKYSPTSPKYSPTSP 59
Score = 63.2 bits (152), Expect(2) = 4e-11
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 49 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 105
Score = 28.5 bits (62), Expect(2) = 4e-11
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSPTSP
Sbjct: 37 SPVYSVTSPKYSPTSP 52
Score = 63.2 bits (152), Expect = 1e-08
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S+ P YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 38 PVYSVTSPK---YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS- 93
Query: 359 SQYTP 345
+Y+P
Sbjct: 94 PKYSP 98
Score = 49.7 bits (117), Expect(2) = 4e-08
Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 12/63 (19%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSP--------SSPQFSP----STGYSPSQPGYS 372
P YSP+SP YSP+SP S SP YSP +SP +SP S +SP+ P YS
Sbjct: 91 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYS 150
Query: 371 PSS 363
SS
Sbjct: 151 ISS 153
Score = 31.6 bits (70), Expect(2) = 4e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 50 TSPKYSPTSPKYSPTSP 66
Score = 54.7 bits (130), Expect(2) = 2e-07
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = -3
Query: 506 SIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
S Y+ SP YS +SP S SP YSP+SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 31 SQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 84
Score = 24.3 bits (51), Expect(2) = 2e-07
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ YSPTSP
Sbjct: 4 TSPTYNANNAYYSPTSP 20
[144][TOP]
>UniRef100_Q84KP6 DNA-directed RNA polymerase n=1 Tax=Cyanidioschyzon merolae
RepID=Q84KP6_CYAME
Length = 1819
Score = 62.0 bits (149), Expect(2) = 1e-11
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 6/65 (9%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST---GYSPSQP--GYSPSSTS-Q 354
P YSP+SP YSP+SP S SP YSP+SP +SPS+ YSPS P YSPSS +
Sbjct: 1660 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPSSPNVAYSPSSPNVAYSPSSPNVA 1719
Query: 353 YTPQT 339
Y+P +
Sbjct: 1720 YSPSS 1724
Score = 31.2 bits (69), Expect(2) = 1e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1647 TSPAYSPTSPAYSPTSP 1663
Score = 67.4 bits (163), Expect(2) = 1e-10
Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = -3
Query: 524 IVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS-QY 351
+V P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSPSS + Y
Sbjct: 1643 LVSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPSSPNVAY 1702
Query: 350 TPQT 339
+P +
Sbjct: 1703 SPSS 1706
Score = 22.7 bits (47), Expect(2) = 1e-10
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
+S + P+YSPTSP
Sbjct: 1629 FSPSSPAYSPTSP 1641
Score = 62.0 bits (149), Expect(2) = 1e-09
Identities = 34/63 (53%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPG--YSPSSTS-QYT 348
P YSP+SP YSP+SP S SP YSP+SP +SP S YSPS P YSPSS + Y+
Sbjct: 1653 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPSSPNVAYSPSSPNVAYS 1712
Query: 347 PQT 339
P +
Sbjct: 1713 PSS 1715
Score = 55.1 bits (131), Expect(2) = 1e-09
Identities = 34/69 (49%), Positives = 41/69 (59%), Gaps = 10/69 (14%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPD--YSPSSPQF-----SPSTGYSPSQP--GYSPSS 363
P YSP+SP YSP+SP S SP+ YSPSSP SP+ YSPS P YSPSS
Sbjct: 1674 PTSPAYSPTSPAYSPTSPAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSS 1733
Query: 362 TS-QYTPQT 339
+ Y+P +
Sbjct: 1734 PNVAYSPSS 1742
Score = 31.2 bits (69), Expect(2) = 1e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1654 TSPAYSPTSPAYSPTSP 1670
Score = 24.3 bits (51), Expect(2) = 1e-09
Identities = 12/18 (66%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = -1
Query: 553 TSPNY-SXTFPSYSPTSP 503
TSP S T P+YSPTSP
Sbjct: 1639 TSPRLVSPTSPAYSPTSP 1656
Score = 49.7 bits (117), Expect(2) = 5e-08
Identities = 37/74 (50%), Positives = 43/74 (58%), Gaps = 15/74 (20%)
Frame = -3
Query: 515 PNISIYSPSSPT--YSPSSPYNSGVSPD-----YSPSSPQF-----SPSTGYSPSQP--G 378
PN++ YSPSSP YSPSSP N SP YSPSSP SP+ YSPS P
Sbjct: 1707 PNVA-YSPSSPNVAYSPSSP-NVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVA 1764
Query: 377 YSPSSTS-QYTPQT 339
YSPSS + Y+P +
Sbjct: 1765 YSPSSPNVAYSPSS 1778
Score = 31.2 bits (69), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1661 TSPAYSPTSPAYSPTSP 1677
Score = 49.3 bits (116), Expect(2) = 7e-08
Identities = 35/80 (43%), Positives = 40/80 (50%), Gaps = 21/80 (26%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPY--------NSGVSPD-----YSPSSPQF-----SPSTGYSP 390
P YSP+SP YSPSSP N SP YSPSSP SP+ YSP
Sbjct: 1681 PTSPAYSPTSPAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSP 1740
Query: 389 SQP--GYSPSSTS-QYTPQT 339
S P YSPSS + Y+P +
Sbjct: 1741 SSPNVAYSPSSPNVAYSPSS 1760
Score = 31.2 bits (69), Expect(2) = 7e-08
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1668 TSPAYSPTSPAYSPTSP 1684
Score = 48.9 bits (115), Expect(2) = 2e-07
Identities = 38/73 (52%), Positives = 45/73 (61%), Gaps = 14/73 (19%)
Frame = -3
Query: 515 PNISIYSPSSPT--YSPSSPYNSGVSPD-----YSPSSPQ--FSPST--GYSPSQP--GY 375
PN++ YSPSSP YSPSSP N SP YSPSSP +SPS+ YSPS P Y
Sbjct: 1734 PNVA-YSPSSPNVAYSPSSP-NVAYSPSSPNVAYSPSSPNVAYSPSSPVAYSPSSPNVAY 1791
Query: 374 SPSSTS-QYTPQT 339
SPSS + Y+P +
Sbjct: 1792 SPSSPNVAYSPSS 1804
Score = 30.0 bits (66), Expect(2) = 2e-07
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPFILH 491
TSP YS T P+YSP+SP + +
Sbjct: 1682 TSPAYSPTSPAYSPSSPNVAY 1702
Score = 58.9 bits (141), Expect = 2e-07
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Frame = -3
Query: 509 ISIYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+ +SPSSP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1626 LGAFSPSSPAYSPTSPRLVSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1681
[145][TOP]
>UniRef100_UPI00017B0A92 UPI00017B0A92 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B0A92
Length = 1714
Score = 64.7 bits (156), Expect(2) = 1e-11
Identities = 29/52 (55%), Positives = 39/52 (75%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSP+SP S SP YSP+SP +SP++ P+ P YSP+S S Y+P
Sbjct: 1592 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSGPTSPSYSPTSPS-YSP 1642
Score = 28.5 bits (62), Expect(2) = 1e-11
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS T P+Y P SP
Sbjct: 1567 SPNYSPTSPAYEPRSP 1582
Score = 60.8 bits (146), Expect(2) = 3e-11
Identities = 33/64 (51%), Positives = 41/64 (64%), Gaps = 7/64 (10%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNS------GVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 357
P YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S +
Sbjct: 1601 PTSPSYSPTSPSYSPTSPSYSPTSPSGPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN 1660
Query: 356 QYTP 345
YTP
Sbjct: 1661 -YTP 1663
Score = 31.2 bits (69), Expect(2) = 3e-11
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T PSYSPTSP
Sbjct: 1589 SPGYSPTSPSYSPTSP 1604
Score = 56.6 bits (135), Expect(2) = 1e-10
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS------PSTGYSPSQPGYSPSSTSQ 354
P YSP+SP+YSP+SP S SP YSP+SP ++ P++ Y+P YSP ++
Sbjct: 1628 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPPHQLVPTSPYTPHISVYSPPTSPT 1687
Query: 353 YTP 345
Y+P
Sbjct: 1688 YSP 1690
Score = 33.5 bits (75), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1595 TSPSYSPTSPSYSPTSP 1611
Score = 51.6 bits (122), Expect(2) = 3e-09
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 20/77 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSP--------------------YNSGVSPDYSPSSPQFSPSTGY 396
P YSP+SP+YSP+SP Y+ SP YSP+SP+ S Y
Sbjct: 1642 PTSPSYSPTSPSYSPTSPNYTPPHQLVPTSPYTPHISVYSPPTSPTYSPTSPKGST---Y 1698
Query: 395 SPSQPGYSPSSTSQYTP 345
SP+ PGYSP+S + Y+P
Sbjct: 1699 SPTSPGYSPTSPT-YSP 1714
Score = 33.5 bits (75), Expect(2) = 3e-09
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1602 TSPSYSPTSPSYSPTSP 1618
Score = 64.3 bits (155), Expect = 6e-09
Identities = 31/57 (54%), Positives = 38/57 (66%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+SP S YSP+ P YSP+S S Y+P
Sbjct: 1594 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSGPTSPSYSPTSPSYSPTSPS-YSP 1649
Score = 56.2 bits (134), Expect = 2e-06
Identities = 29/55 (52%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = -3
Query: 515 PNISIYSPSSPT-YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 357
P Y P SP Y+P SP S SP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1572 PTSPAYEPRSPGGYTPQSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1626
Score = 54.3 bits (129), Expect = 6e-06
Identities = 33/69 (47%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS-- 366
P S P+ S SPS PT SP S SP YSP+SP +SP S YSP+ P Y+P
Sbjct: 1611 PSYSPTSPSYSPTSPSGPT----SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPPHQ 1666
Query: 365 --STSQYTP 345
TS YTP
Sbjct: 1667 LVPTSPYTP 1675
[146][TOP]
>UniRef100_Q5EXZ8 RNA polymerase II largest subunit (Fragment) n=1 Tax=Periplaneta
americana RepID=Q5EXZ8_PERAM
Length = 97
Score = 62.4 bits (150), Expect(2) = 1e-11
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSS 363
P YSPSS YSP+SP + SP+YSPSSP +SP+ GYSP+ P YSP+S
Sbjct: 39 PTSPQYSPSSSKYSPTSPTYTPTSPNYSPSSPTYSPAVPGYSPTSPTYSPTS 90
Score = 30.8 bits (68), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P+YSPTSP
Sbjct: 26 SSPSYSPTSPTYSPTSP 42
Score = 63.5 bits (153), Expect(2) = 1e-10
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSPSS S SP Y+P+SP +SPS+ YSP+ PGYSP+S + Y+P
Sbjct: 32 PTSPTYSPTSPQYSPSSSKYSPTSPTYTPTSPNYSPSSPTYSPAVPGYSPTSPT-YSP 88
Score = 26.6 bits (57), Expect(2) = 1e-10
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
S YS + PSYSPTSP
Sbjct: 20 STRYSPSSPSYSPTSP 35
Score = 63.9 bits (154), Expect(2) = 2e-10
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSPSSP+YSP+SP S SP YSPSS ++SP S Y+P+ P YSPSS + Y+P
Sbjct: 23 YSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTPTSPNYSPSSPT-YSP 74
Score = 25.4 bits (54), Expect(2) = 2e-10
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 541 YSXTFPSYSPTSP 503
YS T PSYSP+SP
Sbjct: 1 YSPTSPSYSPSSP 13
Score = 61.6 bits (148), Expect = 4e-08
Identities = 33/54 (61%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
Frame = -3
Query: 500 YSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSP+SP+YSPSSP + S YSPSSP +SP S YSP+ P YSPSS S+Y+P
Sbjct: 1 YSPTSPSYSPSSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSPSS-SKYSP 53
Score = 60.8 bits (146), Expect = 6e-08
Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 9/68 (13%)
Frame = -3
Query: 515 PNISIYSPSSPT--------YSPSSPYNSGVSPDYSPSSPQFSPSTG-YSPSQPGYSPSS 363
P YSPSSP YSPSSP S SP YSP+SPQ+SPS+ YSP+ P Y+P+S
Sbjct: 3 PTSPSYSPSSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTPTS 62
Query: 362 TSQYTPQT 339
+ Y+P +
Sbjct: 63 PN-YSPSS 69
[147][TOP]
>UniRef100_Q9XZS1 DNA-directed RNA polymerase n=1 Tax=Drosophila guanche
RepID=Q9XZS1_DROGU
Length = 1889
Score = 60.8 bits (146), Expect(2) = 2e-11
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + +P YSP+SP +S S YSP+ P YS + ++Y+P
Sbjct: 1703 PTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTG-AKYSP 1758
Score = 32.0 bits (71), Expect(2) = 2e-11
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + PSYSPTSP
Sbjct: 1690 TSPSYSPSSPSYSPTSP 1706
Score = 59.7 bits (143), Expect(2) = 3e-11
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P Y+P SP YSP+SP S SP YSPSSPQ SPS YSP+ YS +S +Y+P
Sbjct: 1774 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATS-PRYSP 1829
Score = 32.3 bits (72), Expect(2) = 3e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ PSYSPTSP
Sbjct: 1718 TSPNYTPATPSYSPTSP 1734
Score = 63.9 bits (154), Expect(2) = 4e-11
Identities = 30/53 (56%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--TGYSPSQPGYSPSS 363
PN+SIYSPSS YSP+SP + + +YSP+SP +SP+ + YSP+ P YSPSS
Sbjct: 1829 PNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSS 1881
Score = 27.7 bits (60), Expect(2) = 4e-11
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P YSPTSP
Sbjct: 1783 SPQYSPASPKYSPTSP 1798
Score = 58.2 bits (139), Expect(2) = 1e-10
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 10/62 (16%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQY 351
YSP+SPTYSP SP G SP YSP+SP++SP++ YSPS P +SPS +QY
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQY 1813
Query: 350 TP 345
+P
Sbjct: 1814 SP 1815
Score = 32.0 bits (71), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1704 TSPCYSPTSPSYSPTSP 1720
Score = 65.9 bits (159), Expect(2) = 1e-10
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
YSPSS YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1673 YSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1726
Score = 23.9 bits (50), Expect(2) = 1e-10
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
++ YS T P YSPTS F
Sbjct: 1636 SASGYSPTSPVYSPTSNF 1653
Score = 64.7 bits (156), Expect(2) = 2e-10
Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 336
YSPSSP YSP+SP + SP Y+ ++P F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1598 YSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTS-PVYSPTSN 1652
Score = 24.6 bits (52), Expect(2) = 2e-10
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y+ +SP
Sbjct: 1576 SPSYSPTSPNYTASSP 1591
Score = 65.5 bits (158), Expect(2) = 6e-10
Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
PN YSP+SP+YSPSSP S SP YSP+SP +SP S Y+P+ P YSP+S
Sbjct: 1682 PNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTS 1733
Score = 21.9 bits (45), Expect(2) = 6e-10
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
S YS + YSPTSP
Sbjct: 1630 STGYSPSASGYSPTSP 1645
Score = 63.5 bits (153), Expect = 1e-08
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ + YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P Y+P +T Y+P
Sbjct: 1675 PSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSP 1731
Score = 55.8 bits (133), Expect(2) = 1e-08
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P S YS +SP YSP+ S S YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1815 PTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 53.1 bits (126), Expect(2) = 1e-08
Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 15/72 (20%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPY------NSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTS 357
P YSP+SP Y+P++P N SP YSP+SP +S + YSP+ P YSP S S
Sbjct: 1710 PTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPS 1769
Query: 356 --------QYTP 345
QYTP
Sbjct: 1770 YDGSPGSPQYTP 1781
Score = 30.0 bits (66), Expect(2) = 1e-08
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P YSPTSP
Sbjct: 1697 SSPSYSPTSPCYSPTSP 1713
Score = 27.3 bits (59), Expect(2) = 1e-08
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSP+SP
Sbjct: 1790 SPKYSPTSPLYSPSSP 1805
Score = 52.0 bits (123), Expect(2) = 1e-08
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 20/77 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVS-------------------PDYSPSSPQFSP-STGY 396
P+ S YSP+SP YSP+S + S S +YSP+SP +SP S Y
Sbjct: 1635 PSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSY 1694
Query: 395 SPSQPGYSPSSTSQYTP 345
SPS P YSP+S Y+P
Sbjct: 1695 SPSSPSYSPTSPC-YSP 1710
Score = 30.8 bits (68), Expect(2) = 1e-08
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS + P+YSPTSP
Sbjct: 1595 SPNYSPSSPNYSPTSP 1610
Score = 52.4 bits (124), Expect(2) = 4e-07
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP YSP+SP S SP +SPS+ Q+SP S YSP+ YSPSST
Sbjct: 1781 PGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNMSIYSPSST 1839
Query: 359 SQYTP 345
+Y+P
Sbjct: 1840 -KYSP 1843
Score = 25.4 bits (54), Expect(2) = 4e-07
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T YSPTSP
Sbjct: 1746 SPAYSQTGAKYSPTSP 1761
Score = 54.3 bits (129), Expect = 6e-06
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSST 360
P+ S PN YSP+SP Y+ SP + +P+++P S +SPS +GYSP+ P YSP+S
Sbjct: 1596 PNYSPSSPN---YSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSN 1652
Query: 359 SQYTP 345
+P
Sbjct: 1653 FPSSP 1657
[148][TOP]
>UniRef100_Q29IN2 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
pseudoobscura RepID=Q29IN2_DROPS
Length = 1889
Score = 60.8 bits (146), Expect(2) = 2e-11
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + +P YSP+SP +S S YSP+ P YS + ++Y+P
Sbjct: 1703 PTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTG-AKYSP 1758
Score = 32.0 bits (71), Expect(2) = 2e-11
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + PSYSPTSP
Sbjct: 1690 TSPSYSPSSPSYSPTSP 1706
Score = 59.7 bits (143), Expect(2) = 3e-11
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P Y+P SP YSP+SP S SP YSPSSPQ SPS YSP+ YS +S +Y+P
Sbjct: 1774 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATS-PRYSP 1829
Score = 32.3 bits (72), Expect(2) = 3e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ PSYSPTSP
Sbjct: 1718 TSPNYTPATPSYSPTSP 1734
Score = 63.9 bits (154), Expect(2) = 4e-11
Identities = 30/53 (56%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--TGYSPSQPGYSPSS 363
PN+SIYSPSS YSP+SP + + +YSP+SP +SP+ + YSP+ P YSPSS
Sbjct: 1829 PNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSS 1881
Score = 27.7 bits (60), Expect(2) = 4e-11
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P YSPTSP
Sbjct: 1783 SPQYSPASPKYSPTSP 1798
Score = 65.5 bits (158), Expect(2) = 1e-10
Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 336
YSPSSP YSP+SP + SP Y+ ++P F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1598 YSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTS-PVYSPTSN 1652
Score = 58.2 bits (139), Expect(2) = 1e-10
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 10/62 (16%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQY 351
YSP+SPTYSP SP G SP YSP+SP++SP++ YSPS P +SPS +QY
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQY 1813
Query: 350 TP 345
+P
Sbjct: 1814 SP 1815
Score = 32.0 bits (71), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1704 TSPCYSPTSPSYSPTSP 1720
Score = 24.6 bits (52), Expect(2) = 1e-10
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y+ +SP
Sbjct: 1576 SPSYSPTSPNYTASSP 1591
Score = 65.9 bits (159), Expect(2) = 1e-10
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
YSPSS YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1673 YSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1726
Score = 23.9 bits (50), Expect(2) = 1e-10
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
++ YS T P YSPTS F
Sbjct: 1636 SASGYSPTSPVYSPTSNF 1653
Score = 65.5 bits (158), Expect(2) = 6e-10
Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
PN YSP+SP+YSPSSP S SP YSP+SP +SP S Y+P+ P YSP+S
Sbjct: 1682 PNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTS 1733
Score = 21.9 bits (45), Expect(2) = 6e-10
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
S YS + YSPTSP
Sbjct: 1630 STGYSPSASGYSPTSP 1645
Score = 63.5 bits (153), Expect = 1e-08
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ + YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P Y+P +T Y+P
Sbjct: 1675 PSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSP 1731
Score = 55.8 bits (133), Expect(2) = 1e-08
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P S YS +SP YSP+ S S YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1815 PTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 53.1 bits (126), Expect(2) = 1e-08
Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 15/72 (20%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPY------NSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTS 357
P YSP+SP Y+P++P N SP YSP+SP +S + YSP+ P YSP S S
Sbjct: 1710 PTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPS 1769
Query: 356 --------QYTP 345
QYTP
Sbjct: 1770 YDGSPGSPQYTP 1781
Score = 30.0 bits (66), Expect(2) = 1e-08
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P YSPTSP
Sbjct: 1697 SSPSYSPTSPCYSPTSP 1713
Score = 27.3 bits (59), Expect(2) = 1e-08
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSP+SP
Sbjct: 1790 SPKYSPTSPLYSPSSP 1805
Score = 52.0 bits (123), Expect(2) = 1e-08
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 20/77 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVS-------------------PDYSPSSPQFSP-STGY 396
P+ S YSP+SP YSP+S + S S +YSP+SP +SP S Y
Sbjct: 1635 PSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSY 1694
Query: 395 SPSQPGYSPSSTSQYTP 345
SPS P YSP+S Y+P
Sbjct: 1695 SPSSPSYSPTSPC-YSP 1710
Score = 30.8 bits (68), Expect(2) = 1e-08
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS + P+YSPTSP
Sbjct: 1595 SPNYSPSSPNYSPTSP 1610
Score = 52.4 bits (124), Expect(2) = 4e-07
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP YSP+SP S SP +SPS+ Q+SP S YSP+ YSPSST
Sbjct: 1781 PGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNMSIYSPSST 1839
Query: 359 SQYTP 345
+Y+P
Sbjct: 1840 -KYSP 1843
Score = 25.4 bits (54), Expect(2) = 4e-07
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T YSPTSP
Sbjct: 1746 SPAYSQTGAKYSPTSP 1761
Score = 55.1 bits (131), Expect = 3e-06
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSST 360
P+ S PN YSP+SP Y+ +SP + +P+++P S +SPS +GYSP+ P YSP+S
Sbjct: 1596 PNYSPSSPN---YSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSN 1652
Query: 359 SQYTP 345
+P
Sbjct: 1653 FPSSP 1657
[149][TOP]
>UniRef100_B4JXA6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4JXA6_DROGR
Length = 1889
Score = 62.8 bits (151), Expect(2) = 2e-11
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + V+P YSP+SP +S S YSP+ P YS + +Y+P
Sbjct: 1703 PTSPCYSPTSPSYSPTSPKYTAVTPSYSPTSPNYSASPHYSPASPAYSQTGV-KYSP 1758
Score = 30.0 bits (66), Expect(2) = 2e-11
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS + PSYSPTSP
Sbjct: 1691 SPSYSPSSPSYSPTSP 1706
Score = 63.9 bits (154), Expect(2) = 4e-11
Identities = 30/53 (56%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--TGYSPSQPGYSPSS 363
PN+SIYSPSS YSP+SP + + +YSP+SP +SP+ + YSP+ P YSPSS
Sbjct: 1829 PNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSS 1881
Score = 27.7 bits (60), Expect(2) = 4e-11
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P YSPTSP
Sbjct: 1783 SPQYSPASPKYSPTSP 1798
Score = 58.2 bits (139), Expect(2) = 1e-10
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 10/62 (16%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQY 351
YSP+SPTYSP SP G SP YSP+SP++SP++ YSPS P +SPS +QY
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQY 1813
Query: 350 TP 345
+P
Sbjct: 1814 SP 1815
Score = 32.0 bits (71), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1704 TSPCYSPTSPSYSPTSP 1720
Score = 59.7 bits (143), Expect(2) = 1e-10
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P Y+P SP YSP+SP S SP YSPSSPQ SPS YSP+ YS +S +Y+P
Sbjct: 1774 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATS-PRYSP 1829
Score = 30.0 bits (66), Expect(2) = 1e-10
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ PSYSPTSP
Sbjct: 1718 TSPKYTAVTPSYSPTSP 1734
Score = 62.8 bits (151), Expect(2) = 5e-10
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 7/59 (11%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS------TSQYTP 345
YSPSS YSP+SP S +SP YSPSSP +SP S YSP+ P YSP+S T Y+P
Sbjct: 1673 YSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTPSYSP 1731
Score = 25.0 bits (53), Expect(2) = 5e-10
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
+S YS T P YSPTS F
Sbjct: 1636 SSSGYSPTSPVYSPTSNF 1653
Score = 62.8 bits (151), Expect(2) = 6e-10
Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQF-SPSTGYSPSQPGYSPSSTSQYTPQTN 336
YSPSSP YSP+SP + SP Y+ ++P F + STGYSPS GYSP+S Y+P +N
Sbjct: 1598 YSPSSPNYSPTSPLYTATSPRYASATPNFNAQSTGYSPSSSGYSPTS-PVYSPTSN 1652
Score = 24.6 bits (52), Expect(2) = 6e-10
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y+ +SP
Sbjct: 1576 SPSYSPTSPNYTASSP 1591
Score = 55.8 bits (133), Expect(2) = 1e-08
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P S YS +SP YSP+ S S YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1815 PTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 52.4 bits (124), Expect(2) = 1e-08
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 20/77 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVS-------------------PDYSPSSPQFSP-STGY 396
P+ S YSP+SP YSP+S + S S +YSP+SP +SP S Y
Sbjct: 1635 PSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNLYSPGNAYSPSSSNYSPNSPSYSPMSPSY 1694
Query: 395 SPSQPGYSPSSTSQYTP 345
SPS P YSP+S Y+P
Sbjct: 1695 SPSSPSYSPTSPC-YSP 1710
Score = 30.8 bits (68), Expect(2) = 1e-08
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS + P+YSPTSP
Sbjct: 1595 SPNYSPSSPNYSPTSP 1610
Score = 27.3 bits (59), Expect(2) = 1e-08
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSP+SP
Sbjct: 1790 SPKYSPTSPLYSPSSP 1805
Score = 51.6 bits (122), Expect(2) = 3e-08
Identities = 33/73 (45%), Positives = 40/73 (54%), Gaps = 16/73 (21%)
Frame = -3
Query: 515 PNISIYSPSS-------PTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSST 360
P YSP+S P+YSP+SP N SP YSP+SP +S + YSP+ P YSP S
Sbjct: 1710 PTSPSYSPTSPKYTAVTPSYSPTSP-NYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSP 1768
Query: 359 S--------QYTP 345
S QYTP
Sbjct: 1769 SYDGSPGSPQYTP 1781
Score = 30.0 bits (66), Expect(2) = 3e-08
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P YSPTSP
Sbjct: 1697 SSPSYSPTSPCYSPTSP 1713
Score = 61.6 bits (148), Expect = 4e-08
Identities = 35/81 (43%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--------GYSPSQP 381
P S PN YSP SP+YSPSSP S SP YSP+SP +SP++ YSP+ P
Sbjct: 1675 PSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTPSYSPTSP 1734
Query: 380 GYSPSSTSQYTPQTNDKDERG 318
YS S Y+P + + G
Sbjct: 1735 NYSAS--PHYSPASPAYSQTG 1753
Score = 52.4 bits (124), Expect(2) = 5e-07
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP YSP+SP S SP +SPS+ Q+SP S YSP+ YSPSST
Sbjct: 1781 PGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNMSIYSPSST 1839
Query: 359 SQYTP 345
+Y+P
Sbjct: 1840 -KYSP 1843
Score = 25.0 bits (53), Expect(2) = 5e-07
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T YSPTSP
Sbjct: 1746 SPAYSQTGVKYSPTSP 1761
Score = 54.3 bits (129), Expect = 6e-06
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ S PN YSP+SP Y+ +SP + +P+++ S +SP S+GYSP+ P YSP+S
Sbjct: 1596 PNYSPSSPN---YSPTSPLYTATSPRYASATPNFNAQSTGYSPSSSGYSPTSPVYSPTSN 1652
Query: 359 SQYTP 345
Q +P
Sbjct: 1653 FQSSP 1657
Score = 46.2 bits (108), Expect(2) = 7e-06
Identities = 32/72 (44%), Positives = 35/72 (48%), Gaps = 20/72 (27%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVS-------------------PDYSPSSPQFSP-STGYSPSQP 381
YSPSS YSP+SP S S YSPSS +SP S YSP P
Sbjct: 1633 YSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNLYSPGNAYSPSSSNYSPNSPSYSPMSP 1692
Query: 380 GYSPSSTSQYTP 345
YSPSS S Y+P
Sbjct: 1693 SYSPSSPS-YSP 1703
Score = 27.3 bits (59), Expect(2) = 7e-06
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SPNYS T P Y+ TSP
Sbjct: 1601 SSPNYSPTSPLYTATSP 1617
[150][TOP]
>UniRef100_Q9XZU8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drosophila
pseudoobscura pseudoobscura RepID=Q9XZU8_DROPS
Length = 1811
Score = 60.8 bits (146), Expect(2) = 2e-11
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + +P YSP+SP +S S YSP+ P YS + ++Y+P
Sbjct: 1625 PTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTG-AKYSP 1680
Score = 32.0 bits (71), Expect(2) = 2e-11
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + PSYSPTSP
Sbjct: 1612 TSPSYSPSSPSYSPTSP 1628
Score = 59.7 bits (143), Expect(2) = 3e-11
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P Y+P SP YSP+SP S SP YSPSSPQ SPS YSP+ YS +S +Y+P
Sbjct: 1696 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATS-PRYSP 1751
Score = 32.3 bits (72), Expect(2) = 3e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ PSYSPTSP
Sbjct: 1640 TSPNYTPATPSYSPTSP 1656
Score = 63.9 bits (154), Expect(2) = 4e-11
Identities = 30/53 (56%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--TGYSPSQPGYSPSS 363
PN+SIYSPSS YSP+SP + + +YSP+SP +SP+ + YSP+ P YSPSS
Sbjct: 1751 PNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSS 1803
Score = 27.7 bits (60), Expect(2) = 4e-11
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P YSPTSP
Sbjct: 1705 SPQYSPASPKYSPTSP 1720
Score = 65.5 bits (158), Expect(2) = 1e-10
Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 336
YSPSSP YSP+SP + SP Y+ ++P F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1520 YSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTS-PVYSPTSN 1574
Score = 58.2 bits (139), Expect(2) = 1e-10
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 10/62 (16%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQY 351
YSP+SPTYSP SP G SP YSP+SP++SP++ YSPS P +SPS +QY
Sbjct: 1678 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQY 1735
Query: 350 TP 345
+P
Sbjct: 1736 SP 1737
Score = 32.0 bits (71), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1626 TSPCYSPTSPSYSPTSP 1642
Score = 24.6 bits (52), Expect(2) = 1e-10
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y+ +SP
Sbjct: 1498 SPSYSPTSPNYTASSP 1513
Score = 65.9 bits (159), Expect(2) = 1e-10
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
YSPSS YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1595 YSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1648
Score = 23.9 bits (50), Expect(2) = 1e-10
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
++ YS T P YSPTS F
Sbjct: 1558 SASGYSPTSPVYSPTSNF 1575
Score = 65.5 bits (158), Expect(2) = 6e-10
Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
PN YSP+SP+YSPSSP S SP YSP+SP +SP S Y+P+ P YSP+S
Sbjct: 1604 PNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTS 1655
Score = 21.9 bits (45), Expect(2) = 6e-10
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
S YS + YSPTSP
Sbjct: 1552 STGYSPSASGYSPTSP 1567
Score = 63.5 bits (153), Expect = 1e-08
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ + YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P Y+P +T Y+P
Sbjct: 1597 PSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSP 1653
Score = 55.8 bits (133), Expect(2) = 1e-08
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P S YS +SP YSP+ S S YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1737 PTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1794
Score = 53.1 bits (126), Expect(2) = 1e-08
Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 15/72 (20%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPY------NSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTS 357
P YSP+SP Y+P++P N SP YSP+SP +S + YSP+ P YSP S S
Sbjct: 1632 PTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPS 1691
Query: 356 --------QYTP 345
QYTP
Sbjct: 1692 YDGSPGSPQYTP 1703
Score = 30.0 bits (66), Expect(2) = 1e-08
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P YSPTSP
Sbjct: 1619 SSPSYSPTSPCYSPTSP 1635
Score = 27.3 bits (59), Expect(2) = 1e-08
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSP+SP
Sbjct: 1712 SPKYSPTSPLYSPSSP 1727
Score = 52.0 bits (123), Expect(2) = 1e-08
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 20/77 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVS-------------------PDYSPSSPQFSP-STGY 396
P+ S YSP+SP YSP+S + S S +YSP+SP +SP S Y
Sbjct: 1557 PSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSY 1616
Query: 395 SPSQPGYSPSSTSQYTP 345
SPS P YSP+S Y+P
Sbjct: 1617 SPSSPSYSPTSPC-YSP 1632
Score = 30.8 bits (68), Expect(2) = 1e-08
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS + P+YSPTSP
Sbjct: 1517 SPNYSPSSPNYSPTSP 1532
Score = 52.4 bits (124), Expect(2) = 4e-07
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP YSP+SP S SP +SPS+ Q+SP S YSP+ YSPSST
Sbjct: 1703 PGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNMSIYSPSST 1761
Query: 359 SQYTP 345
+Y+P
Sbjct: 1762 -KYSP 1765
Score = 25.4 bits (54), Expect(2) = 4e-07
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T YSPTSP
Sbjct: 1668 SPAYSQTGAKYSPTSP 1683
Score = 55.1 bits (131), Expect = 3e-06
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSST 360
P+ S PN YSP+SP Y+ +SP + +P+++P S +SPS +GYSP+ P YSP+S
Sbjct: 1518 PNYSPSSPN---YSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSN 1574
Query: 359 SQYTP 345
+P
Sbjct: 1575 FPSSP 1579
[151][TOP]
>UniRef100_B4H2R8 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
RepID=B4H2R8_DROPE
Length = 1804
Score = 60.8 bits (146), Expect(2) = 2e-11
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + +P YSP+SP +S S YSP+ P YS + ++Y+P
Sbjct: 1637 PTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTG-AKYSP 1692
Score = 32.0 bits (71), Expect(2) = 2e-11
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS + PSYSPTSP
Sbjct: 1624 TSPSYSPSSPSYSPTSP 1640
Score = 59.7 bits (143), Expect(2) = 3e-11
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P Y+P SP YSP+SP S SP YSPSSPQ SPS YSP+ YS +S +Y+P
Sbjct: 1708 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATS-PRYSP 1763
Score = 32.3 bits (72), Expect(2) = 3e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ PSYSPTSP
Sbjct: 1652 TSPNYTPATPSYSPTSP 1668
Score = 65.5 bits (158), Expect(2) = 1e-10
Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 336
YSPSSP YSP+SP + SP Y+ ++P F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1532 YSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTS-PVYSPTSN 1586
Score = 58.2 bits (139), Expect(2) = 1e-10
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 10/62 (16%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQY 351
YSP+SPTYSP SP G SP YSP+SP++SP++ YSPS P +SPS +QY
Sbjct: 1690 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQY 1747
Query: 350 TP 345
+P
Sbjct: 1748 SP 1749
Score = 32.0 bits (71), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1638 TSPCYSPTSPSYSPTSP 1654
Score = 24.6 bits (52), Expect(2) = 1e-10
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y+ +SP
Sbjct: 1510 SPSYSPTSPNYTASSP 1525
Score = 65.9 bits (159), Expect(2) = 1e-10
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
YSPSS YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1607 YSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1660
Score = 23.9 bits (50), Expect(2) = 1e-10
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
++ YS T P YSPTS F
Sbjct: 1570 SASGYSPTSPVYSPTSNF 1587
Score = 65.5 bits (158), Expect(2) = 6e-10
Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
PN YSP+SP+YSPSSP S SP YSP+SP +SP S Y+P+ P YSP+S
Sbjct: 1616 PNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTS 1667
Score = 21.9 bits (45), Expect(2) = 6e-10
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
S YS + YSPTSP
Sbjct: 1564 STGYSPSASGYSPTSP 1579
Score = 63.5 bits (153), Expect = 1e-08
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P+ + YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P Y+P +T Y+P
Sbjct: 1609 PSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSP 1665
Score = 53.1 bits (126), Expect(2) = 1e-08
Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 15/72 (20%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPY------NSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTS 357
P YSP+SP Y+P++P N SP YSP+SP +S + YSP+ P YSP S S
Sbjct: 1644 PTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPS 1703
Query: 356 --------QYTP 345
QYTP
Sbjct: 1704 YDGSPGSPQYTP 1715
Score = 30.0 bits (66), Expect(2) = 1e-08
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P YSPTSP
Sbjct: 1631 SSPSYSPTSPCYSPTSP 1647
Score = 52.0 bits (123), Expect(2) = 1e-08
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 20/77 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVS-------------------PDYSPSSPQFSP-STGY 396
P+ S YSP+SP YSP+S + S S +YSP+SP +SP S Y
Sbjct: 1569 PSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSY 1628
Query: 395 SPSQPGYSPSSTSQYTP 345
SPS P YSP+S Y+P
Sbjct: 1629 SPSSPSYSPTSPC-YSP 1644
Score = 30.8 bits (68), Expect(2) = 1e-08
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS + P+YSPTSP
Sbjct: 1529 SPNYSPSSPNYSPTSP 1544
Score = 52.4 bits (124), Expect(2) = 4e-07
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP YSP+SP S SP +SPS+ Q+SP S YSP+ YSPSST
Sbjct: 1715 PGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNMSIYSPSST 1773
Query: 359 SQYTP 345
+Y+P
Sbjct: 1774 -KYSP 1777
Score = 25.4 bits (54), Expect(2) = 4e-07
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T YSPTSP
Sbjct: 1680 SPAYSQTGAKYSPTSP 1695
Score = 55.1 bits (131), Expect = 3e-06
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSST 360
P+ S PN YSP+SP Y+ +SP + +P+++P S +SPS +GYSP+ P YSP+S
Sbjct: 1530 PNYSPSSPN---YSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSN 1586
Query: 359 SQYTP 345
+P
Sbjct: 1587 FPSSP 1591
Score = 46.2 bits (108), Expect(2) = 6e-06
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 14/71 (19%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYN------SGVSPDYSP-------SSPQFSP-STGYSPSQPG 378
P +YSPSSP +SPS+ Y+ S SP YSP SS ++SP S Y+P+
Sbjct: 1729 PTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARN 1788
Query: 377 YSPSSTSQYTP 345
YSP+S Y+P
Sbjct: 1789 YSPTSL-MYSP 1798
Score = 27.7 bits (60), Expect(2) = 6e-06
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P YSPTSP
Sbjct: 1717 SPQYSPASPKYSPTSP 1732
[152][TOP]
>UniRef100_A7AWJ0 DNA-directed RNA polymerase n=1 Tax=Babesia bovis RepID=A7AWJ0_BABBO
Length = 1746
Score = 61.6 bits (148), Expect(2) = 2e-11
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST---GYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP++ GY P+ P Y P+S + Y+P
Sbjct: 1646 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPNLGYLPTSPAYRPTSPA-YSP 1704
Score = 31.2 bits (69), Expect(2) = 2e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1626 TSPAYSPTSPAYSPTSP 1642
Score = 58.9 bits (141), Expect(2) = 1e-10
Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP--GYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P GY P+S + Y P
Sbjct: 1639 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPNLGYLPTSPA-YRP 1697
Score = 30.8 bits (68), Expect(2) = 1e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P+YSPTSP
Sbjct: 1619 TSPVYSPTSPAYSPTSP 1635
Score = 67.0 bits (162), Expect = 9e-10
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P + P +YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1611 PTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1670
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1671 A-YSP 1674
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = -3
Query: 503 IYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
+YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1601 VYSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1653
Score = 63.9 bits (154), Expect = 7e-09
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1604 PASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1660
Score = 58.5 bits (140), Expect = 3e-07
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P + ++ P +YSP+SP Y + S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1576 PSMGMMSPTSPVYSPTSPVYGQAGGVYSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSP 1635
Query: 359 SQYTP 345
+ Y+P
Sbjct: 1636 A-YSP 1639
Score = 57.8 bits (138), Expect = 5e-07
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S PN+ Y P+SP Y P+SP S SP YSP+SP +SP S YSP+ P YSP
Sbjct: 1677 PAYSPTSPNLG-YLPTSPAYRPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPEYSPE-- 1733
Query: 359 SQYTPQTNDKDE 324
++P +++E
Sbjct: 1734 DPFSPNPFEEEE 1745
Score = 53.9 bits (128), Expect = 8e-06
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P + P YSP+SP YSP SP SP YSP+SP +SP S YSP+ P YS
Sbjct: 1618 PTSPVYSPTSPAYSPTSPAYSPTSPAYSP----TSPAYSPTSPAYSPTSPAYSPTSPAYS 1673
Query: 371 PSSTSQYTP 345
P+S + Y+P
Sbjct: 1674 PTSPA-YSP 1681
[153][TOP]
>UniRef100_C6F1F0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F0_PLAVI
Length = 218
Score = 63.9 bits (154), Expect(2) = 2e-11
Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSPSS P +
Sbjct: 65 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSS 124
Score = 28.5 bits (62), Expect(2) = 2e-11
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSPTSP
Sbjct: 53 SPVYSVTSPKYSPTSP 68
Score = 59.3 bits (142), Expect(2) = 7e-11
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP++SP S YSPS P + S+ Y+P
Sbjct: 72 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSP 129
Score = 31.6 bits (70), Expect(2) = 7e-11
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 59 TSPKYSPTSPKYSPTSP 75
Score = 66.2 bits (160), Expect = 1e-09
Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 5/68 (7%)
Frame = -3
Query: 527 SIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
S+V P S+ YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 50 SVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 109
Query: 362 TSQYTPQT 339
QY+P +
Sbjct: 110 -PQYSPSS 116
Score = 54.7 bits (130), Expect = 4e-06
Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Frame = -3
Query: 521 VFPNISIY-SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYT 348
V PN+ Y S SP YS +SP S SP YSP+SP++SP S YSP+ P YSP+S +Y+
Sbjct: 41 VNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYS 99
Query: 347 P 345
P
Sbjct: 100 P 100
[154][TOP]
>UniRef100_B4L732 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4L732_DROMO
Length = 1889
Score = 62.0 bits (149), Expect(2) = 3e-11
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP + V+P YSP+SP +S S YSP+ P YS + +Y+P
Sbjct: 1703 PTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGV-KYSP 1758
Score = 59.7 bits (143), Expect(2) = 3e-11
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P Y+P SP YSP+SP S SP YSPSSPQ SPS YSP+ YS +S +Y+P
Sbjct: 1774 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATS-PRYSP 1829
Score = 32.3 bits (72), Expect(2) = 3e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNY+ PSYSPTSP
Sbjct: 1718 TSPNYTPVTPSYSPTSP 1734
Score = 30.0 bits (66), Expect(2) = 3e-11
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS + PSYSPTSP
Sbjct: 1691 SPSYSPSSPSYSPTSP 1706
Score = 63.9 bits (154), Expect(2) = 4e-11
Identities = 30/53 (56%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--TGYSPSQPGYSPSS 363
PN+SIYSPSS YSP+SP + + +YSP+SP +SP+ + YSP+ P YSPSS
Sbjct: 1829 PNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSS 1881
Score = 27.7 bits (60), Expect(2) = 4e-11
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P YSPTSP
Sbjct: 1783 SPQYSPASPKYSPTSP 1798
Score = 65.9 bits (159), Expect(2) = 6e-11
Identities = 34/55 (61%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
YSPSS YSP+SP S +SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1673 YSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1726
Score = 25.0 bits (53), Expect(2) = 6e-11
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
+S YS T P YSPTS F
Sbjct: 1636 SSSGYSPTSPVYSPTSNF 1653
Score = 65.9 bits (159), Expect(2) = 8e-11
Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 336
YSPSSP YSP+SP + SP Y+ ++P F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1598 YSPSSPNYSPTSPLYASTSPRYASTTPNFNPQSTGYSPSSSGYSPTS-PVYSPTSN 1652
Score = 24.6 bits (52), Expect(2) = 8e-11
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y+ +SP
Sbjct: 1576 SPSYSPTSPNYTASSP 1591
Score = 58.2 bits (139), Expect(2) = 1e-10
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 10/62 (16%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQY 351
YSP+SPTYSP SP G SP YSP+SP++SP++ YSPS P +SPS +QY
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQY 1813
Query: 350 TP 345
+P
Sbjct: 1814 SP 1815
Score = 32.0 bits (71), Expect(2) = 1e-10
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T PSYSPTSP
Sbjct: 1704 TSPCYSPTSPSYSPTSP 1720
Score = 64.7 bits (156), Expect = 4e-09
Identities = 33/59 (55%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P S PN YSP SP+YSPSSP S SP YSP+SP +SP S Y+P P YSP+S
Sbjct: 1675 PSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTS 1733
Score = 55.8 bits (133), Expect(2) = 1e-08
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 345
P S YS +SP YSP+ S S YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1815 PTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 52.4 bits (124), Expect(2) = 1e-08
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 20/77 (25%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVS-------------------PDYSPSSPQFSP-STGY 396
P+ S YSP+SP YSP+S + S S +YSP+SP +SP S Y
Sbjct: 1635 PSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSPSYSPMSPSY 1694
Query: 395 SPSQPGYSPSSTSQYTP 345
SPS P YSP+S Y+P
Sbjct: 1695 SPSSPSYSPTSPC-YSP 1710
Score = 30.8 bits (68), Expect(2) = 1e-08
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SPNYS + P+YSPTSP
Sbjct: 1595 SPNYSPSSPNYSPTSP 1610
Score = 27.3 bits (59), Expect(2) = 1e-08
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSP+SP
Sbjct: 1790 SPKYSPTSPLYSPSSP 1805
Score = 52.0 bits (123), Expect(2) = 2e-08
Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 15/72 (20%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPY------NSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTS 357
P YSP+SP Y+P +P N SP YSP+SP +S + YSP+ P YSP S S
Sbjct: 1710 PTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSPS 1769
Query: 356 --------QYTP 345
QYTP
Sbjct: 1770 YDGSPGSPQYTP 1781
Score = 30.0 bits (66), Expect(2) = 2e-08
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP+YS T P YSPTSP
Sbjct: 1697 SSPSYSPTSPCYSPTSP 1713
Score = 52.4 bits (124), Expect(2) = 5e-07
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSST 360
P YSP+SP YSP+SP S SP +SPS+ Q+SP S YSP+ YSPSST
Sbjct: 1781 PGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNMSIYSPSST 1839
Query: 359 SQYTP 345
+Y+P
Sbjct: 1840 -KYSP 1843
Score = 25.0 bits (53), Expect(2) = 5e-07
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T YSPTSP
Sbjct: 1746 SPAYSQTGVKYSPTSP 1761
Score = 57.4 bits (137), Expect = 7e-07
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P+ S PN YSP+SP Y+ +SP + +P+++P S +SP S+GYSP+ P YSP+S
Sbjct: 1596 PNYSPSSPN---YSPTSPLYASTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSN 1652
Query: 359 SQYTP 345
Q +P
Sbjct: 1653 FQSSP 1657
[155][TOP]
>UniRef100_Q7SDN0 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
RepID=Q7SDN0_NEUCR
Length = 1752
Score = 60.5 bits (145), Expect(2) = 3e-11
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 18/84 (21%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--GYSPSQP------------- 381
P YSP+SP+YSP+SP SP YSP+SP +SP++ YSP+ P
Sbjct: 1665 PTSPSYSPTSPSYSPASPAFQATSPSYSPASPTWSPTSPDAYSPTSPSFQRSPGQQLSPT 1724
Query: 380 ---GYSPSSTSQYTPQTNDKDERG 318
GYSP+S QY+P+T ++ G
Sbjct: 1725 SPTGYSPTS-PQYSPRTPGRNNSG 1747
Score = 31.6 bits (70), Expect(2) = 3e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSP SP
Sbjct: 1633 TSPSYSPTSPSYSPASP 1649
Score = 58.5 bits (140), Expect = 3e-07
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPT--YSPSSPYNSGVSPDYSPSSPQF-SPSTGYSPSQPGYSPS 366
P S P + YSP+SP +SP+SP S SP YSP+SP F + S YSP+ P +SP+
Sbjct: 1642 PSYSPASPAAARYSPTSPAQQFSPTSPSYSPTSPSYSPASPAFQATSPSYSPASPTWSPT 1701
Query: 365 STSQYTP 345
S Y+P
Sbjct: 1702 SPDAYSP 1708
Score = 55.5 bits (132), Expect = 3e-06
Identities = 33/64 (51%), Positives = 40/64 (62%), Gaps = 6/64 (9%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSP---DYSPSSP--QFSP-STGYSPSQPGY 375
P S P + SP+SP+YSP+SP S SP YSP+SP QFSP S YSP+ P Y
Sbjct: 1618 PSFSPTSPMLRPGSPTSPSYSPTSPSYSPASPAAARYSPTSPAQQFSPTSPSYSPTSPSY 1677
Query: 374 SPSS 363
SP+S
Sbjct: 1678 SPAS 1681
[156][TOP]
>UniRef100_C6F1F3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi
RepID=C6F1F3_9APIC
Length = 225
Score = 60.5 bits (145), Expect(2) = 3e-11
Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P Y P+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S P +
Sbjct: 72 PTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSS 131
Score = 31.6 bits (70), Expect(2) = 3e-11
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 59 TSPKYSPTSPKYSPTSP 75
Score = 62.4 bits (150), Expect(2) = 7e-11
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP Y P+SP S SP YSP+SP++SP S YSP+ P YSP+S QY+P
Sbjct: 65 PTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PQYSP 121
Score = 28.5 bits (62), Expect(2) = 7e-11
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSPTSP
Sbjct: 53 SPVYSVTSPKYSPTSP 68
Score = 58.2 bits (139), Expect(2) = 7e-10
Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P + S+ Y+P
Sbjct: 79 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSP 136
Score = 29.3 bits (64), Expect(2) = 7e-10
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P Y PTSP
Sbjct: 66 TSPKYSPTSPKYLPTSP 82
Score = 62.0 bits (149), Expect = 3e-08
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Frame = -3
Query: 527 SIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
S+V P S+ YSP+SP YSP+SP SP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 50 SVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 109
Query: 362 TSQYTP 345
+Y+P
Sbjct: 110 -PKYSP 114
[157][TOP]
>UniRef100_O77375 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
RepID=O77375_PLAF7
Length = 2457
Score = 63.2 bits (152), Expect(2) = 4e-11
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 2297 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 2353
Score = 28.5 bits (62), Expect(2) = 4e-11
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSPTSP
Sbjct: 2285 SPVYSVTSPKYSPTSP 2300
Score = 53.5 bits (127), Expect(2) = 3e-09
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--GYSPSQPGYSPSS 363
P YSP+SP YSP+SP S SP YSP+SP++SP++ + + P YSP S
Sbjct: 2318 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYS 2370
Score = 31.6 bits (70), Expect(2) = 3e-09
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 2291 TSPKYSPTSPKYSPTSP 2307
Score = 63.2 bits (152), Expect = 1e-08
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S+ P YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 2286 PVYSVTSPK---YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS- 2341
Query: 359 SQYTP 345
+Y+P
Sbjct: 2342 PKYSP 2346
Score = 54.7 bits (130), Expect(2) = 2e-07
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = -3
Query: 506 SIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
S Y+ SP YS +SP S SP YSP+SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 2279 SQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 2332
Score = 47.4 bits (111), Expect(2) = 2e-07
Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGV-SPDYSP---SSPQFSP-STGYSPSQPGYSPS 366
P YSP+SP YSP+SP + SP+YSP +SP+FSP S YS S P Y S
Sbjct: 2339 PTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYSISSPVYDKS 2393
Score = 31.6 bits (70), Expect(2) = 2e-07
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 2298 TSPKYSPTSPKYSPTSP 2314
Score = 24.3 bits (51), Expect(2) = 2e-07
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ YSPTSP
Sbjct: 2252 TSPTYNANNAYYSPTSP 2268
[158][TOP]
>UniRef100_Q4P7Q0 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
RepID=Q4P7Q0_USTMA
Length = 1774
Score = 60.5 bits (145), Expect(2) = 4e-11
Identities = 28/47 (59%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
+SP+SP YSP+SP S SP +SP+SPQ+SP S YSP+ P YSP+S
Sbjct: 1695 FSPTSPAYSPTSPQYSPASPAFSPTSPQYSPASPQYSPTSPQYSPTS 1741
Score = 31.2 bits (69), Expect(2) = 4e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS P+Y+PTSP
Sbjct: 1661 TSPNYSPASPAYTPTSP 1677
Score = 58.5 bits (140), Expect(2) = 1e-10
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 10/62 (16%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST----------GYSPSQPGYSPSSTSQY 351
YSP+SP +SP+SP S SP Y+P+SP +SP++ G+SP+ P YSP+S QY
Sbjct: 1651 YSPASPKFSPTSPNYSPASPAYTPTSPVYSPTSPAMAGRGGGKGFSPTSPAYSPTS-PQY 1709
Query: 350 TP 345
+P
Sbjct: 1710 SP 1711
Score = 31.6 bits (70), Expect(2) = 1e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSP SP
Sbjct: 1606 TSPSYSPTSPSYSPASP 1622
Score = 57.0 bits (136), Expect(2) = 3e-09
Identities = 29/58 (50%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP+ P S P
Sbjct: 1697 PTSPAYSPTSPQYSPASPAFSPTSPQYSPASPQYSPTSPQYSPTSPAMGMGGASAGGP 1754
Score = 28.1 bits (61), Expect(2) = 3e-09
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS P +SPTSP
Sbjct: 1647 TSPQYSPASPKFSPTSP 1663
Score = 62.4 bits (150), Expect = 2e-08
Identities = 36/77 (46%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSP---YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSP 369
P S PN S SP+ YSPSSP Y + SP YSP+SP+FSP S YSP+ P Y+P
Sbjct: 1615 PSYSPASPNYSPSSPAGAGYSPSSPAGRYGAATSPQYSPASPKFSPTSPNYSPASPAYTP 1674
Query: 368 SSTSQYTPQTNDKDERG 318
+S Y+P + RG
Sbjct: 1675 TS-PVYSPTSPAMAGRG 1690
Score = 51.2 bits (121), Expect(2) = 3e-06
Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = -3
Query: 491 SSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPG--YSPSSTSQYTP 345
+SP+YSP+SP S SP+YSPSSP GYSPS P Y +++ QY+P
Sbjct: 1606 TSPSYSPTSPSYSPASPNYSPSSP---AGAGYSPSSPAGRYGAATSPQYSP 1653
Score = 23.9 bits (50), Expect(2) = 3e-06
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 544 NYSXTFPSYSPTSPFI 497
N T P+YSPTSP I
Sbjct: 1586 NMGATSPAYSPTSPRI 1601
Score = 54.7 bits (130), Expect = 4e-06
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 10/74 (13%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSP---------DYSPSSPQFSP-STGYSPS 387
P S PN YSP+SP Y+P+SP S SP +SP+SP +SP S YSP+
Sbjct: 1656 PKFSPTSPN---YSPASPAYTPTSPVYSPTSPAMAGRGGGKGFSPTSPAYSPTSPQYSPA 1712
Query: 386 QPGYSPSSTSQYTP 345
P +SP+S QY+P
Sbjct: 1713 SPAFSPTS-PQYSP 1725
[159][TOP]
>UniRef100_C0SE75 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb03 RepID=C0SE75_PARBP
Length = 2106
Score = 60.8 bits (146), Expect(2) = 5e-11
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 12/69 (17%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG------------YSPSQPGYS 372
P YSP+SP++SP+SP S SP YSP+SP STG Y+P+ PG+S
Sbjct: 1645 PTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWS 1704
Query: 371 PSSTSQYTP 345
P+S Y+P
Sbjct: 1705 PTSPETYSP 1713
Score = 30.4 bits (67), Expect(2) = 5e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P +SPTSP
Sbjct: 1632 TSPSYSPTSPGFSPTSP 1648
Score = 60.1 bits (144), Expect(2) = 1e-09
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
SP+SP+YSP+SP S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1630 SPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1675
Score = 26.2 bits (56), Expect(2) = 1e-09
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP ++ T P+YSPTSP
Sbjct: 1610 SPVFAPTSPAYSPTSP 1625
Score = 48.5 bits (114), Expect(2) = 9e-08
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 10/59 (16%)
Frame = -3
Query: 512 NISIYSPSSPTYSPSSPYNSGVSPD-YSPSSPQFS---------PSTGYSPSQPGYSPS 366
++S SP+SP Y+P+SP S SP+ YSP+SP FS S GYSP+ P +SP+
Sbjct: 1685 HLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPT 1743
Score = 31.6 bits (70), Expect(2) = 9e-08
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP +S T PSYSPTSP
Sbjct: 1639 TSPGFSPTSPSYSPTSP 1655
Score = 57.0 bits (136), Expect = 9e-07
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
Frame = -3
Query: 536 PDISIVFPNISI---YSPSSPTYSPSSPYNSGVSPDY--SPSSPQFSP-STGYSPSQPGY 375
P +SI P +SP+SP ++P+SP S SP Y SP+SP +SP S G+SP+ P Y
Sbjct: 1591 PGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPSY 1650
Query: 374 SPSSTS 357
SP+S S
Sbjct: 1651 SPTSPS 1656
Score = 55.5 bits (132), Expect = 3e-06
Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 6/63 (9%)
Frame = -3
Query: 515 PNISIYSP---SSPTYSPSSPYNSGVSPDYSPSSP--QFSP-STGYSPSQPGYSPSSTSQ 354
P +SI SP SSP +SP+SP + SP YSP+SP Q SP S YSP+ PG+SP+S S
Sbjct: 1591 PGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPS- 1649
Query: 353 YTP 345
Y+P
Sbjct: 1650 YSP 1652
[160][TOP]
>UniRef100_A6QYA7 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6QYA7_AJECN
Length = 1747
Score = 60.8 bits (146), Expect(2) = 5e-11
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 12/69 (17%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG------------YSPSQPGYS 372
P YSP+SP++SP+SP S SP YSP+SP STG Y+P+ PG+S
Sbjct: 1645 PTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPGWS 1704
Query: 371 PSSTSQYTP 345
P+S Y+P
Sbjct: 1705 PTSPETYSP 1713
Score = 30.4 bits (67), Expect(2) = 5e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P +SPTSP
Sbjct: 1632 TSPSYSPTSPGFSPTSP 1648
Score = 60.1 bits (144), Expect(2) = 6e-10
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
SP+SP+YSP+SP S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1630 SPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1675
Score = 27.3 bits (59), Expect(2) = 6e-10
Identities = 14/19 (73%), Positives = 14/19 (73%), Gaps = 2/19 (10%)
Frame = -1
Query: 553 TSPNYSXTFPSY--SPTSP 503
TSP YS T PSY SPTSP
Sbjct: 1616 TSPAYSPTSPSYQQSPTSP 1634
Score = 48.9 bits (115), Expect(2) = 7e-08
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 10/63 (15%)
Frame = -3
Query: 512 NISIYSPSSPTYSPSSPYNSGVSPD-YSPSSPQFS---------PSTGYSPSQPGYSPSS 363
++S SP+SP Y+P+SP S SP+ YSP+SP FS S GYSP+ P ++P S
Sbjct: 1685 HLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPIS 1744
Query: 362 TSQ 354
Q
Sbjct: 1745 PRQ 1747
Score = 31.6 bits (70), Expect(2) = 7e-08
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP +S T PSYSPTSP
Sbjct: 1639 TSPGFSPTSPSYSPTSP 1655
Score = 57.4 bits (137), Expect = 7e-07
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
Frame = -3
Query: 536 PDISIVFPNISI---YSPSSPTYSPSSPYNSGVSPDY--SPSSPQFSP-STGYSPSQPGY 375
P +SI P +SP+SP ++P+SP S SP Y SP+SP +SP S G+SP+ P Y
Sbjct: 1591 PGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPSY 1650
Query: 374 SPSSTS 357
SP+S S
Sbjct: 1651 SPTSPS 1656
Score = 55.5 bits (132), Expect = 3e-06
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 6/63 (9%)
Frame = -3
Query: 515 PNISIYSP---SSPTYSPSSPYNSGVSPDYSPSSPQF--SP-STGYSPSQPGYSPSSTSQ 354
P +SI SP SSP +SP+SP + SP YSP+SP + SP S YSP+ PG+SP+S S
Sbjct: 1591 PGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPS- 1649
Query: 353 YTP 345
Y+P
Sbjct: 1650 YSP 1652
[161][TOP]
>UniRef100_C1GHL1 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb18 RepID=C1GHL1_PARBD
Length = 1746
Score = 60.8 bits (146), Expect(2) = 5e-11
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 12/69 (17%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG------------YSPSQPGYS 372
P YSP+SP++SP+SP S SP YSP+SP STG Y+P+ PG+S
Sbjct: 1645 PTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWS 1704
Query: 371 PSSTSQYTP 345
P+S Y+P
Sbjct: 1705 PTSPETYSP 1713
Score = 30.4 bits (67), Expect(2) = 5e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P +SPTSP
Sbjct: 1632 TSPSYSPTSPGFSPTSP 1648
Score = 60.1 bits (144), Expect(2) = 1e-09
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
SP+SP+YSP+SP S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1630 SPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1675
Score = 26.2 bits (56), Expect(2) = 1e-09
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP ++ T P+YSPTSP
Sbjct: 1610 SPVFAPTSPAYSPTSP 1625
Score = 50.1 bits (118), Expect(2) = 3e-08
Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 10/60 (16%)
Frame = -3
Query: 512 NISIYSPSSPTYSPSSPYNSGVSPD-YSPSSPQFS---------PSTGYSPSQPGYSPSS 363
++S SP+SP Y+P+SP S SP+ YSP+SP FS S GYSP+ P +SP+S
Sbjct: 1685 HLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPTS 1744
Score = 31.6 bits (70), Expect(2) = 3e-08
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP +S T PSYSPTSP
Sbjct: 1639 TSPGFSPTSPSYSPTSP 1655
Score = 57.0 bits (136), Expect = 9e-07
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
Frame = -3
Query: 536 PDISIVFPNISI---YSPSSPTYSPSSPYNSGVSPDY--SPSSPQFSP-STGYSPSQPGY 375
P +SI P +SP+SP ++P+SP S SP Y SP+SP +SP S G+SP+ P Y
Sbjct: 1591 PGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPSY 1650
Query: 374 SPSSTS 357
SP+S S
Sbjct: 1651 SPTSPS 1656
Score = 55.5 bits (132), Expect = 3e-06
Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 6/63 (9%)
Frame = -3
Query: 515 PNISIYSP---SSPTYSPSSPYNSGVSPDYSPSSP--QFSP-STGYSPSQPGYSPSSTSQ 354
P +SI SP SSP +SP+SP + SP YSP+SP Q SP S YSP+ PG+SP+S S
Sbjct: 1591 PGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPS- 1649
Query: 353 YTP 345
Y+P
Sbjct: 1650 YSP 1652
[162][TOP]
>UniRef100_B6QAY2 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224
RepID=B6QAY2_PENMQ
Length = 1744
Score = 60.8 bits (146), Expect(2) = 5e-11
Identities = 33/73 (45%), Positives = 40/73 (54%), Gaps = 16/73 (21%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP----------------STGYSPSQ 384
P +SPSSP YSPSSP S SP +SPSSP +SP S YSP+
Sbjct: 1637 PTSPRFSPSSPNYSPSSPNFSPASPAFSPSSPTYSPTSPAIGGRQFSPSSPSSPKYSPAS 1696
Query: 383 PGYSPSSTSQYTP 345
PG+SP+S Y+P
Sbjct: 1697 PGWSPTSPEIYSP 1709
Score = 30.4 bits (67), Expect(2) = 5e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP++ T PSYSPTSP
Sbjct: 1624 TSPSFQATSPSYSPTSP 1640
Score = 62.0 bits (149), Expect = 3e-08
Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 9/75 (12%)
Frame = -3
Query: 536 PDISIVFPNISIYSPS----SPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P +I P S SPS SP+YSP+SP S SP+YSPSSP FSP S +SPS P YS
Sbjct: 1612 PAFAITSPAYSPTSPSFQATSPSYSPTSPRFSPSSPNYSPSSPNFSPASPAFSPSSPTYS 1671
Query: 371 PSSTS----QYTPQT 339
P+S + Q++P +
Sbjct: 1672 PTSPAIGGRQFSPSS 1686
Score = 59.3 bits (142), Expect = 2e-07
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 12/70 (17%)
Frame = -3
Query: 536 PDISIVFPNISIYSP-----------SSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYS 393
P++S+ P SP +SP YSP+SP SP YSP+SP+FSPS+ YS
Sbjct: 1591 PNMSVTSPRFMSTSPGFSPQSPAFAITSPAYSPTSPSFQATSPSYSPTSPRFSPSSPNYS 1650
Query: 392 PSQPGYSPSS 363
PS P +SP+S
Sbjct: 1651 PSSPNFSPAS 1660
[163][TOP]
>UniRef100_C0NEY2 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0NEY2_AJECG
Length = 1234
Score = 60.8 bits (146), Expect(2) = 5e-11
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 12/69 (17%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG------------YSPSQPGYS 372
P YSP+SP++SP+SP S SP YSP+SP STG Y+P+ PG+S
Sbjct: 1132 PTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPGWS 1191
Query: 371 PSSTSQYTP 345
P+S Y+P
Sbjct: 1192 PTSPETYSP 1200
Score = 30.4 bits (67), Expect(2) = 5e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P +SPTSP
Sbjct: 1119 TSPSYSPTSPGFSPTSP 1135
Score = 60.1 bits (144), Expect(2) = 6e-10
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
SP+SP+YSP+SP S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1117 SPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1162
Score = 27.3 bits (59), Expect(2) = 6e-10
Identities = 14/19 (73%), Positives = 14/19 (73%), Gaps = 2/19 (10%)
Frame = -1
Query: 553 TSPNYSXTFPSY--SPTSP 503
TSP YS T PSY SPTSP
Sbjct: 1103 TSPAYSPTSPSYQQSPTSP 1121
Score = 48.9 bits (115), Expect(2) = 7e-08
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 10/63 (15%)
Frame = -3
Query: 512 NISIYSPSSPTYSPSSPYNSGVSPD-YSPSSPQFS---------PSTGYSPSQPGYSPSS 363
++S SP+SP Y+P+SP S SP+ YSP+SP FS S GYSP+ P ++P S
Sbjct: 1172 HLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPIS 1231
Query: 362 TSQ 354
Q
Sbjct: 1232 PRQ 1234
Score = 31.6 bits (70), Expect(2) = 7e-08
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP +S T PSYSPTSP
Sbjct: 1126 TSPGFSPTSPSYSPTSP 1142
Score = 57.4 bits (137), Expect = 7e-07
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
Frame = -3
Query: 536 PDISIVFPNISI---YSPSSPTYSPSSPYNSGVSPDY--SPSSPQFSP-STGYSPSQPGY 375
P +SI P +SP+SP ++P+SP S SP Y SP+SP +SP S G+SP+ P Y
Sbjct: 1078 PGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPSY 1137
Query: 374 SPSSTS 357
SP+S S
Sbjct: 1138 SPTSPS 1143
Score = 55.5 bits (132), Expect = 3e-06
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 6/63 (9%)
Frame = -3
Query: 515 PNISIYSP---SSPTYSPSSPYNSGVSPDYSPSSPQF--SP-STGYSPSQPGYSPSSTSQ 354
P +SI SP SSP +SP+SP + SP YSP+SP + SP S YSP+ PG+SP+S S
Sbjct: 1078 PGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPS- 1136
Query: 353 YTP 345
Y+P
Sbjct: 1137 YSP 1139
[164][TOP]
>UniRef100_C6HNU4 DNA-directed RNA polymerase II n=1 Tax=Ajellomyces capsulatus H143
RepID=C6HNU4_AJECH
Length = 668
Score = 60.8 bits (146), Expect(2) = 5e-11
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 12/69 (17%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG------------YSPSQPGYS 372
P YSP+SP++SP+SP S SP YSP+SP STG Y+P+ PG+S
Sbjct: 566 PTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPGWS 625
Query: 371 PSSTSQYTP 345
P+S Y+P
Sbjct: 626 PTSPETYSP 634
Score = 30.4 bits (67), Expect(2) = 5e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P +SPTSP
Sbjct: 553 TSPSYSPTSPGFSPTSP 569
Score = 60.1 bits (144), Expect(2) = 7e-10
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
SP+SP+YSP+SP S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 551 SPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 596
Score = 27.3 bits (59), Expect(2) = 7e-10
Identities = 14/19 (73%), Positives = 14/19 (73%), Gaps = 2/19 (10%)
Frame = -1
Query: 553 TSPNYSXTFPSY--SPTSP 503
TSP YS T PSY SPTSP
Sbjct: 537 TSPAYSPTSPSYQQSPTSP 555
Score = 48.9 bits (115), Expect(2) = 7e-08
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 10/63 (15%)
Frame = -3
Query: 512 NISIYSPSSPTYSPSSPYNSGVSPD-YSPSSPQFS---------PSTGYSPSQPGYSPSS 363
++S SP+SP Y+P+SP S SP+ YSP+SP FS S GYSP+ P ++P S
Sbjct: 606 HLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPIS 665
Query: 362 TSQ 354
Q
Sbjct: 666 PRQ 668
Score = 31.6 bits (70), Expect(2) = 7e-08
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP +S T PSYSPTSP
Sbjct: 560 TSPGFSPTSPSYSPTSP 576
Score = 57.4 bits (137), Expect = 7e-07
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
Frame = -3
Query: 536 PDISIVFPNISI---YSPSSPTYSPSSPYNSGVSPDY--SPSSPQFSP-STGYSPSQPGY 375
P +SI P +SP+SP ++P+SP S SP Y SP+SP +SP S G+SP+ P Y
Sbjct: 512 PGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPSY 571
Query: 374 SPSSTS 357
SP+S S
Sbjct: 572 SPTSPS 577
Score = 55.5 bits (132), Expect = 3e-06
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 6/63 (9%)
Frame = -3
Query: 515 PNISIYSP---SSPTYSPSSPYNSGVSPDYSPSSPQF--SP-STGYSPSQPGYSPSSTSQ 354
P +SI SP SSP +SP+SP + SP YSP+SP + SP S YSP+ PG+SP+S S
Sbjct: 512 PGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPS- 570
Query: 353 YTP 345
Y+P
Sbjct: 571 YSP 573
[165][TOP]
>UniRef100_C5GKA7 DNA-directed RNA polymerase n=2 Tax=Ajellomyces dermatitidis
RepID=C5GKA7_AJEDR
Length = 1746
Score = 60.5 bits (145), Expect(2) = 6e-11
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 12/69 (17%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG------------YSPSQPGYS 372
P YSP+SP++SP+SP S SP YSP+SP STG Y+P+ PG+S
Sbjct: 1644 PTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGISTGRHLSPTSPTSPKYTPTSPGWS 1703
Query: 371 PSSTSQYTP 345
P+S Y+P
Sbjct: 1704 PTSPETYSP 1712
Score = 30.4 bits (67), Expect(2) = 6e-11
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P +SPTSP
Sbjct: 1631 TSPSYSPTSPGFSPTSP 1647
Score = 60.1 bits (144), Expect(2) = 1e-09
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
SP+SP+YSP+SP S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1629 SPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1674
Score = 26.6 bits (57), Expect(2) = 1e-09
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP ++ T P+YSPTSP
Sbjct: 1609 SPAFAPTSPAYSPTSP 1624
Score = 50.1 bits (118), Expect(2) = 3e-08
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 10/63 (15%)
Frame = -3
Query: 512 NISIYSPSSPTYSPSSPYNSGVSPD-YSPSSPQFS---------PSTGYSPSQPGYSPSS 363
++S SP+SP Y+P+SP S SP+ YSP+SP FS S GYSP+ P ++P+S
Sbjct: 1684 HLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPTS 1743
Query: 362 TSQ 354
Q
Sbjct: 1744 PRQ 1746
Score = 31.6 bits (70), Expect(2) = 3e-08
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP +S T PSYSPTSP
Sbjct: 1638 TSPGFSPTSPSYSPTSP 1654
Score = 57.0 bits (136), Expect = 9e-07
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
Frame = -3
Query: 536 PDISIVFPNISI---YSPSSPTYSPSSPYNSGVSPDY--SPSSPQFSP-STGYSPSQPGY 375
P +SI P +SP+SP ++P+SP S SP Y SP+SP +SP S G+SP+ P Y
Sbjct: 1590 PGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPSY 1649
Query: 374 SPSSTS 357
SP+S S
Sbjct: 1650 SPTSPS 1655
Score = 55.1 bits (131), Expect = 3e-06
Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 6/63 (9%)
Frame = -3
Query: 515 PNISIYSP---SSPTYSPSSPYNSGVSPDYSPSSP--QFSP-STGYSPSQPGYSPSSTSQ 354
P +SI SP SSP +SP+SP + SP YSP+SP Q SP S YSP+ PG+SP+S S
Sbjct: 1590 PGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPS- 1648
Query: 353 YTP 345
Y+P
Sbjct: 1649 YSP 1651
[166][TOP]
>UniRef100_P14248 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Plasmodium
falciparum CDC/Honduras RepID=RPB1_PLAFD
Length = 2452
Score = 62.0 bits (149), Expect(2) = 8e-11
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 2299 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 2350
Score = 28.5 bits (62), Expect(2) = 8e-11
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSPTSP
Sbjct: 2287 SPVYSVTSPKYSPTSP 2302
Score = 63.2 bits (152), Expect = 1e-08
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S+ P YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 2288 PVYSVTSPK---YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS- 2343
Query: 359 SQYTP 345
+Y+P
Sbjct: 2344 PKYSP 2348
Score = 49.7 bits (117), Expect(2) = 4e-08
Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 12/63 (19%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSP--------SSPQFSP----STGYSPSQPGYS 372
P YSP+SP YSP+SP S SP YSP +SP +SP S +SP+ P YS
Sbjct: 2320 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYS 2379
Query: 371 PSS 363
SS
Sbjct: 2380 ISS 2382
Score = 31.6 bits (70), Expect(2) = 4e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 2293 TSPKYSPTSPKYSPTSP 2309
Score = 54.7 bits (130), Expect(2) = 2e-07
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = -3
Query: 506 SIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
S Y+ SP YS +SP S SP YSP+SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 2281 SQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 2334
Score = 24.3 bits (51), Expect(2) = 2e-07
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ YSPTSP
Sbjct: 2254 TSPTYNANNAYYSPTSP 2270
[167][TOP]
>UniRef100_B3L428 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
RepID=B3L428_PLAKH
Length = 2353
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY--SPSQPGYSP 369
P YSP+SP YSP+SP S SP YSP+SPQ+SP++ SPS P YSP
Sbjct: 2214 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNSPSSPHYSP 2264
Score = 31.6 bits (70), Expect(2) = 8e-11
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 2194 TSPKYSPTSPKYSPTSP 2210
Score = 62.8 bits (151), Expect = 2e-08
Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = -3
Query: 548 SKL*PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
S L P ++ P YSP+SP YSP+SP SP YSP+SP++SP S YSP+ P YS
Sbjct: 2185 SVLSPAYAVTSPK---YSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYS 2241
Query: 371 PSSTSQYTP 345
P+S QY+P
Sbjct: 2242 PTS-PQYSP 2249
Score = 61.2 bits (147), Expect = 5e-08
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 339
P YSP+SP Y P+SP S SP YSP+SP++SP S YSP+ P YSP+S +P +
Sbjct: 2200 PTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNSPSS 2259
Score = 51.2 bits (121), Expect(2) = 9e-06
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = -3
Query: 515 PNISIY-SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
PN+ Y S SP Y+ +SP S SP YSP+SP++ P S YSP+ P YSP+S +Y+P
Sbjct: 2178 PNMMKYHSVLSPAYAVTSPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTS-PKYSP 2235
Score = 21.9 bits (45), Expect(2) = 9e-06
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 526 PSYSPTSP 503
PSYSPTSP
Sbjct: 2134 PSYSPTSP 2141
[168][TOP]
>UniRef100_C6F0A4 RNA polymerase II (Fragment) n=2 Tax=Plasmodium (Laverania)
RepID=C6F0A4_PLAFA
Length = 202
Score = 62.0 bits (149), Expect(2) = 9e-11
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 49 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 100
Score = 28.5 bits (62), Expect(2) = 9e-11
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSPTSP
Sbjct: 37 SPVYSVTSPKYSPTSP 52
Score = 63.2 bits (152), Expect = 1e-08
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S+ P YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 38 PVYSVTSPK---YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS- 93
Query: 359 SQYTP 345
+Y+P
Sbjct: 94 PKYSP 98
Score = 49.7 bits (117), Expect(2) = 4e-08
Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 12/63 (19%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSP--------SSPQFSP----STGYSPSQPGYS 372
P YSP+SP YSP+SP S SP YSP +SP +SP S +SP+ P YS
Sbjct: 70 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYS 129
Query: 371 PSS 363
SS
Sbjct: 130 ISS 132
Score = 31.6 bits (70), Expect(2) = 4e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 43 TSPKYSPTSPKYSPTSP 59
Score = 54.7 bits (130), Expect(2) = 2e-07
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = -3
Query: 506 SIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
S Y+ SP YS +SP S SP YSP+SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 31 SQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 84
Score = 24.3 bits (51), Expect(2) = 2e-07
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ YSPTSP
Sbjct: 4 TSPTYNANNAYYSPTSP 20
[169][TOP]
>UniRef100_Q1E2G9 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis
RepID=Q1E2G9_COCIM
Length = 1750
Score = 59.7 bits (143), Expect(2) = 1e-10
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 12/69 (17%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG------------YSPSQPGYS 372
P YSP+SP++SP+SP S SP YSP+SP +TG Y+P+ PG+S
Sbjct: 1648 PTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPGWS 1707
Query: 371 PSSTSQYTP 345
P+S Y+P
Sbjct: 1708 PTSPEAYSP 1716
Score = 30.4 bits (67), Expect(2) = 1e-10
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P +SPTSP
Sbjct: 1635 TSPSYSPTSPGFSPTSP 1651
Score = 60.1 bits (144), Expect(2) = 6e-10
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
SP+SP+YSP+SP S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1633 SPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1678
Score = 27.3 bits (59), Expect(2) = 6e-10
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP ++ T P+YSPTSP
Sbjct: 1611 SPTFAPTSPAYSPTSP 1626
Score = 48.9 bits (115), Expect(2) = 7e-08
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 10/63 (15%)
Frame = -3
Query: 512 NISIYSPSSPTYSPSSPYNSGVSPD-YSPSSPQFS---------PSTGYSPSQPGYSPSS 363
++S SP+SP Y+P+SP S SP+ YSP+SP F+ S GYSP+ P ++P+S
Sbjct: 1688 HLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFAGSPTSPGGPTSPGYSPTSPTFNPTS 1747
Query: 362 TSQ 354
Q
Sbjct: 1748 PRQ 1750
Score = 31.6 bits (70), Expect(2) = 7e-08
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP +S T PSYSPTSP
Sbjct: 1642 TSPGFSPTSPSYSPTSP 1658
Score = 58.2 bits (139), Expect = 4e-07
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 8/68 (11%)
Frame = -3
Query: 536 PDISIVFPNISI---YSPSSPTYSPSSPYNSGVSPDY----SPSSPQFSP-STGYSPSQP 381
P +SI P +SP+SPT++P+SP S SP Y SP+SP +SP S G+SP+ P
Sbjct: 1592 PGMSITSPRYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSP 1651
Query: 380 GYSPSSTS 357
YSP+S S
Sbjct: 1652 SYSPTSPS 1659
[170][TOP]
>UniRef100_C5PAJ4 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735 delta
SOWgp RepID=C5PAJ4_COCP7
Length = 1746
Score = 59.7 bits (143), Expect(2) = 1e-10
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 12/69 (17%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG------------YSPSQPGYS 372
P YSP+SP++SP+SP S SP YSP+SP +TG Y+P+ PG+S
Sbjct: 1648 PTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPGWS 1707
Query: 371 PSSTSQYTP 345
P+S Y+P
Sbjct: 1708 PTSPEAYSP 1716
Score = 30.4 bits (67), Expect(2) = 1e-10
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P +SPTSP
Sbjct: 1635 TSPSYSPTSPGFSPTSP 1651
Score = 60.1 bits (144), Expect(2) = 6e-10
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
SP+SP+YSP+SP S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1633 SPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1678
Score = 27.3 bits (59), Expect(2) = 6e-10
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP ++ T P+YSPTSP
Sbjct: 1611 SPTFAPTSPAYSPTSP 1626
Score = 58.2 bits (139), Expect = 4e-07
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 8/68 (11%)
Frame = -3
Query: 536 PDISIVFPNISI---YSPSSPTYSPSSPYNSGVSPDY----SPSSPQFSP-STGYSPSQP 381
P +SI P +SP+SPT++P+SP S SP Y SP+SP +SP S G+SP+ P
Sbjct: 1592 PGMSITSPRYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSP 1651
Query: 380 GYSPSSTS 357
YSP+S S
Sbjct: 1652 SYSPTSPS 1659
Score = 46.2 bits (108), Expect(2) = 4e-07
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 10/59 (16%)
Frame = -3
Query: 512 NISIYSPSSPTYSPSSPYNSGVSPD-YSPSSPQFS---------PSTGYSPSQPGYSPS 366
++S SP+SP Y+P+SP S SP+ YSP+SP F+ S GYSP+ P ++P+
Sbjct: 1688 HLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFAGSPTSPGGPTSPGYSPTSPTFNPT 1746
Score = 31.6 bits (70), Expect(2) = 4e-07
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP +S T PSYSPTSP
Sbjct: 1642 TSPGFSPTSPSYSPTSP 1658
[171][TOP]
>UniRef100_C7YI77 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YI77_NECH7
Length = 1750
Score = 59.3 bits (142), Expect(2) = 2e-10
Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 24/76 (31%)
Frame = -3
Query: 500 YSPSSPTYSPSSP-------------YNSGVSPDYSPSSPQFSP-----------STGYS 393
YSPSSP YSP+SP +NS SP+YSP+SP +SP S YS
Sbjct: 1627 YSPSSPNYSPASPSSPRHYSPTSPAQFNSPTSPNYSPASPNYSPASPNLHAGGTTSPSYS 1686
Query: 392 PSQPGYSPSSTSQYTP 345
P+ P +SP+S Y+P
Sbjct: 1687 PASPTWSPTSPEAYSP 1702
Score = 30.0 bits (66), Expect(2) = 2e-10
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPFI 497
TSP++S + PS+SPTSP +
Sbjct: 1599 TSPSFSPSSPSFSPTSPMV 1617
Score = 55.5 bits (132), Expect = 3e-06
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
Frame = -3
Query: 500 YSPSSPTYSPSSPY---NSGVSPDYSPSSPQFSPSTGYSPSQP-GYSPSSTSQYTPQTN 336
+SPSSP++SP+SP S SP+YSPSSP +SP+ SPS P YSP+S +Q+ T+
Sbjct: 1603 FSPSSPSFSPTSPMVRPTSPASPNYSPSSPNYSPA---SPSSPRHYSPTSPAQFNSPTS 1658
[172][TOP]
>UniRef100_O77165 DNA-directed RNA polymerase (Fragment) n=1 Tax=Breviata anathema
RepID=O77165_9EUKA
Length = 1690
Score = 63.9 bits (154), Expect(2) = 2e-10
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1522 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPA-YSP 1578
Score = 63.9 bits (154), Expect(2) = 2e-10
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1543 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPA-YSP 1599
Score = 63.9 bits (154), Expect(2) = 2e-10
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1564 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPA-YSP 1620
Score = 63.9 bits (154), Expect(2) = 2e-10
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1585 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPA-YSP 1641
Score = 25.4 bits (54), Expect(2) = 2e-10
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P+YSP SP
Sbjct: 1510 SPAYSPASPAYSPASP 1525
Score = 25.4 bits (54), Expect(2) = 2e-10
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P+YSP SP
Sbjct: 1517 SPAYSPASPAYSPASP 1532
Score = 25.4 bits (54), Expect(2) = 2e-10
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P+YSP SP
Sbjct: 1524 SPAYSPASPAYSPASP 1539
Score = 25.4 bits (54), Expect(2) = 2e-10
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P+YSP SP
Sbjct: 1531 SPAYSPASPAYSPASP 1546
Score = 62.4 bits (150), Expect(2) = 5e-10
Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P Y P+S + Y+P
Sbjct: 1606 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPASPA-YSP 1662
Score = 25.4 bits (54), Expect(2) = 5e-10
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P+YSP SP
Sbjct: 1552 SPAYSPASPAYSPASP 1567
Score = 61.6 bits (148), Expect(2) = 8e-10
Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP Y P+SP +SP S YSP+ P YSP+S + Y P
Sbjct: 1627 PASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPASPAYSPASPA-YDP 1683
Score = 25.4 bits (54), Expect(2) = 8e-10
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P+YSP SP
Sbjct: 1573 SPAYSPASPAYSPASP 1588
Score = 63.9 bits (154), Expect = 7e-09
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P + YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1501 PAAAGYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPA-YSP 1557
Score = 58.2 bits (139), Expect(2) = 9e-09
Identities = 27/51 (52%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS 366
P YSP+SP YSP+SP SP YSP+SP +SP S YSP+ P Y P+
Sbjct: 1634 PASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPASPAYSPASPAYDPA 1684
Score = 25.4 bits (54), Expect(2) = 9e-09
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS P+YSP SP
Sbjct: 1580 SPAYSPASPAYSPASP 1595
Score = 55.8 bits (133), Expect = 2e-06
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
SP++ YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1500 SPAAAGYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPA-YSP 1550
[173][TOP]
>UniRef100_C4JY44 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JY44_UNCRE
Length = 1747
Score = 58.5 bits (140), Expect(2) = 2e-10
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 12/69 (17%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG------------YSPSQPGYS 372
P YSP+SP++SP+SP S SP YSP+SP TG Y+P+ PG+S
Sbjct: 1600 PTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGVTGRHLSPTSPTSPKYTPTSPGWS 1659
Query: 371 PSSTSQYTP 345
P+S Y+P
Sbjct: 1660 PTSPDAYSP 1668
Score = 30.4 bits (67), Expect(2) = 2e-10
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P +SPTSP
Sbjct: 1587 TSPSYSPTSPGFSPTSP 1603
Score = 60.1 bits (144), Expect(2) = 5e-10
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
SP+SP+YSP+SP S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1585 SPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1630
Score = 27.7 bits (60), Expect(2) = 5e-10
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+++ T P+YSPTSP
Sbjct: 1563 SPSFAPTSPAYSPTSP 1578
Score = 48.5 bits (114), Expect(2) = 9e-08
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 11/60 (18%)
Frame = -3
Query: 512 NISIYSPSSPTYSPSSPYNSGVSPD-YSPSSPQFSPST----------GYSPSQPGYSPS 366
++S SP+SP Y+P+SP S SPD YSP+SP F+ S GYSP+ P Y+P+
Sbjct: 1640 HLSPTSPTSPKYTPTSPGWSPTSPDAYSPTSPNFAGSPTSPGWSLLPPGYSPTSPTYNPN 1699
Score = 31.6 bits (70), Expect(2) = 9e-08
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP +S T PSYSPTSP
Sbjct: 1594 TSPGFSPTSPSYSPTSP 1610
Score = 55.5 bits (132), Expect(2) = 5e-07
Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 5/53 (9%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDY----SPSSPQFSP-STGYSPSQPGYSPSSTS 357
+SP+SP+++P+SP S SP Y SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1559 FSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS 1611
Score = 21.9 bits (45), Expect(2) = 5e-07
Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -1
Query: 553 TSP-NYSXTFPSYSPTSPF 500
TSP N S T P YSP+S +
Sbjct: 1521 TSPFNTSPTSPGYSPSSGY 1539
[174][TOP]
>UniRef100_A5K7P4 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
RepID=A5K7P4_PLAVI
Length = 2379
Score = 65.1 bits (157), Expect(2) = 3e-10
Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Frame = -3
Query: 527 SIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
S+V P S+ YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSPSS
Sbjct: 2218 SVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSS 2277
Query: 362 TSQYTPQT 339
P +
Sbjct: 2278 PVPNNPSS 2285
Score = 23.5 bits (49), Expect(2) = 3e-10
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T P+Y T+P
Sbjct: 2166 SPSYSPTSPTYHLTNP 2181
Score = 59.3 bits (142), Expect(2) = 5e-10
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP++SP S YSPS P + S+ Y+P
Sbjct: 2233 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSP 2290
Score = 28.5 bits (62), Expect(2) = 5e-10
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSPTSP
Sbjct: 2221 SPVYSVTSPKYSPTSP 2236
Score = 55.1 bits (131), Expect = 3e-06
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Frame = -3
Query: 521 VFPNISIY-SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS----- 363
V PN+ Y S SP YS +SP S SP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 2209 VNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 2268
Query: 362 -TSQYTPQT 339
+ QY+P +
Sbjct: 2269 TSPQYSPSS 2277
[175][TOP]
>UniRef100_C6F1F1 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F1_PLAVI
Length = 211
Score = 59.3 bits (142), Expect(2) = 5e-10
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP++SP S YSPS P + S+ Y+P
Sbjct: 65 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSP 122
Score = 28.5 bits (62), Expect(2) = 5e-10
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSPTSP
Sbjct: 53 SPVYSVTSPKYSPTSP 68
Score = 65.1 bits (157), Expect = 3e-09
Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Frame = -3
Query: 527 SIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
S+V P S+ YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSPSS
Sbjct: 50 SVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSS 109
Query: 362 TSQYTPQT 339
P +
Sbjct: 110 PVPNNPSS 117
Score = 55.1 bits (131), Expect = 3e-06
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Frame = -3
Query: 521 VFPNISIY-SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS----- 363
V PN+ Y S SP YS +SP S SP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 41 VNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 100
Query: 362 -TSQYTPQT 339
+ QY+P +
Sbjct: 101 TSPQYSPSS 109
[176][TOP]
>UniRef100_C6F1F5 RNA polymerase II (Fragment) n=1 Tax=Plasmodium fragile
RepID=C6F1F5_PLAFR
Length = 210
Score = 55.8 bits (133), Expect(2) = 7e-10
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY--SPSQPGYSP 369
P Y P+SP YSP+SP S SP YSP+SPQ+SP++ +PS P YSP
Sbjct: 72 PTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPIPNNPSSPHYSP 122
Score = 31.6 bits (70), Expect(2) = 7e-10
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 59 TSPKYSPTSPKYSPTSP 75
Score = 62.4 bits (150), Expect = 2e-08
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Frame = -3
Query: 527 SIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
S+V P S+ YSP+SP YSP+SP SP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 50 SVVSPVYSVTSPKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTS 109
Query: 362 TSQYTPQT 339
P +
Sbjct: 110 PIPNNPSS 117
Score = 53.9 bits (128), Expect = 8e-06
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = -3
Query: 515 PNISIY-SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
PN+ Y S SP YS +SP S SP YSP+SPQ+ P S YSP+ P YSP+S +Y+P
Sbjct: 43 PNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTS-PKYSP 100
[177][TOP]
>UniRef100_B8M2Y2 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500
RepID=B8M2Y2_TALSN
Length = 1755
Score = 56.6 bits (135), Expect(2) = 1e-09
Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 15/72 (20%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP---------------STGYSPSQP 381
P +SPSSP YSPSSP S SP +SP+SP +SP S YSP+ P
Sbjct: 1636 PTSPRFSPSSPNYSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGTRQFSSPTSPKYSPASP 1695
Query: 380 GYSPSSTSQYTP 345
+SP+S Y+P
Sbjct: 1696 AWSPTSPEIYSP 1707
Score = 30.0 bits (66), Expect(2) = 1e-09
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+Y PSYSPTSP
Sbjct: 1623 TSPSYQQASPSYSPTSP 1639
Score = 47.8 bits (112), Expect(2) = 1e-06
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Frame = -3
Query: 503 IYSPSSPTY--SPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPS 366
IYSP+SP SP+SP G SP YSP+SPQ++P+ Y + PG P+
Sbjct: 1704 IYSPTSPNIHGSPTSPARGGTSPSYSPTSPQYNPT--YVYTNPGEVPA 1749
Score = 28.5 bits (62), Expect(2) = 1e-06
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPFI 497
TSP YS P++SPTSP I
Sbjct: 1686 TSPKYSPASPAWSPTSPEI 1704
Score = 54.3 bits (129), Expect = 6e-06
Identities = 27/52 (51%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSS 363
P+ + +SP YSP+SP SP YSP+SP+FSPS+ YSPS P S SS
Sbjct: 1608 PSSPNFQTTSPAYSPTSPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMSLSS 1659
Score = 53.9 bits (128), Expect = 8e-06
Identities = 36/94 (38%), Positives = 46/94 (48%), Gaps = 17/94 (18%)
Frame = -3
Query: 536 PDISIVFPNISIYSP-----------SSPTYSPSSPYNSGVSPDYSPSSPQFS-PSTGYS 393
P S PN SP +SP+YSP+SP S SP+YSPSSP S S +S
Sbjct: 1604 PGFSPSSPNFQTTSPAYSPTSPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMSLSSPAFS 1663
Query: 392 PSQPGYSPSS-----TSQYTPQTNDKDERGKD*W 306
P+ P YSP+S T Q++ T+ K W
Sbjct: 1664 PTSPTYSPTSPAIGGTRQFSSPTSPKYSPASPAW 1697
Score = 53.5 bits (127), Expect = 1e-05
Identities = 29/62 (46%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = -3
Query: 536 PDISIVFPNISI---YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSP 369
P +SI P +SPSSP + +SP S SP Y +SP +SP S +SPS P YSP
Sbjct: 1591 PGMSITSPRFVTSPGFSPSSPNFQTTSPAYSPTSPSYQQASPSYSPTSPRFSPSSPNYSP 1650
Query: 368 SS 363
SS
Sbjct: 1651 SS 1652
[178][TOP]
>UniRef100_C1H3Q4 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1H3Q4_PARBA
Length = 1748
Score = 60.5 bits (145), Expect(2) = 1e-09
Identities = 28/46 (60%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
SP+SP+YSP+SP S SP+YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1635 SPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1680
Score = 26.2 bits (56), Expect(2) = 1e-09
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP ++ T P+YSPTSP
Sbjct: 1615 SPVFAPTSPAYSPTSP 1630
Score = 51.6 bits (122), Expect(2) = 9e-09
Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Frame = -3
Query: 512 NISIYSPSSPTYSPSSPYNSGVSPD-YSPSSPQFS--PSTGYSPSQPGYSPSS 363
++S SP+SP Y+P+SP S SP+ YSP+SP FS P++ P+ PGYSP+S
Sbjct: 1690 HLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1742
Score = 32.0 bits (71), Expect(2) = 9e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PS+SP SP
Sbjct: 1651 TSPNYSPTSPSFSPASP 1667
Score = 61.6 bits (148), Expect = 4e-08
Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 12/76 (15%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG------------YS 393
P S PN YSP+SP++SP+SP S SP YSP+SP STG Y+
Sbjct: 1646 PGFSPTSPN---YSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYT 1702
Query: 392 PSQPGYSPSSTSQYTP 345
P+ PG+SP+S Y+P
Sbjct: 1703 PTSPGWSPTSPETYSP 1718
Score = 57.0 bits (136), Expect = 9e-07
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
Frame = -3
Query: 536 PDISIVFPNISI---YSPSSPTYSPSSPYNSGVSPDY--SPSSPQFSP-STGYSPSQPGY 375
P +SI P +SP+SP ++P+SP S SP Y SP+SP +SP S G+SP+ P Y
Sbjct: 1596 PGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPNY 1655
Query: 374 SPSSTS 357
SP+S S
Sbjct: 1656 SPTSPS 1661
Score = 54.3 bits (129), Expect = 6e-06
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 6/63 (9%)
Frame = -3
Query: 515 PNISIYSP---SSPTYSPSSPYNSGVSPDYSPSSP--QFSP-STGYSPSQPGYSPSSTSQ 354
P +SI SP SSP +SP+SP + SP YSP+SP Q SP S YSP+ PG+SP+S +
Sbjct: 1596 PGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPN- 1654
Query: 353 YTP 345
Y+P
Sbjct: 1655 YSP 1657
[179][TOP]
>UniRef100_C5FCL2 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FCL2_NANOT
Length = 1748
Score = 58.9 bits (141), Expect(2) = 1e-09
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 497 SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
SP+SP+YSP+SP S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1632 SPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPVFSPTSPSYSPTS 1677
Score = 27.7 bits (60), Expect(2) = 1e-09
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+++ T P+YSPTSP
Sbjct: 1610 SPSFAPTSPAYSPTSP 1625
Score = 50.1 bits (118), Expect(2) = 3e-08
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 10/63 (15%)
Frame = -3
Query: 512 NISIYSPSSPTYSPSSPYNSGVSPD-YSPSSPQFS---------PSTGYSPSQPGYSPSS 363
++S SP+SP Y+P+SP S SP+ YSP+SP FS S GYSP+ P ++P+S
Sbjct: 1686 HLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPTS 1745
Query: 362 TSQ 354
Q
Sbjct: 1746 PRQ 1748
Score = 31.6 bits (70), Expect(2) = 3e-08
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP +S T PSYSPTSP
Sbjct: 1641 TSPGFSPTSPSYSPTSP 1657
Score = 55.1 bits (131), Expect(2) = 9e-08
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 25/82 (30%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP------------------------ 408
P YSP+SP +SP+SP S SP +SP+SP FSP
Sbjct: 1633 PTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPVFSPTSPSYSPTSPALGGTGRHLSPTSP 1692
Query: 407 -STGYSPSQPGYSPSSTSQYTP 345
S Y+P+ PG+SP+S Y+P
Sbjct: 1693 TSPKYTPTSPGWSPTSPEAYSP 1714
Score = 25.0 bits (53), Expect(2) = 9e-08
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 4/21 (19%)
Frame = -1
Query: 553 TSPNYSXTFPSY----SPTSP 503
TSP YS T P Y SPTSP
Sbjct: 1616 TSPAYSPTSPGYGQAQSPTSP 1636
Score = 57.0 bits (136), Expect = 9e-07
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 8/68 (11%)
Frame = -3
Query: 536 PDISIVFPNI---SIYSPSSPTYSPSSPYNSGVSPDY----SPSSPQFSP-STGYSPSQP 381
P +SI P +SP+SP+++P+SP S SP Y SP+SP +SP S G+SP+ P
Sbjct: 1591 PGMSITSPRFISSPAFSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSP 1650
Query: 380 GYSPSSTS 357
YSP+S S
Sbjct: 1651 SYSPTSPS 1658
[180][TOP]
>UniRef100_A7EKT1 DNA-directed RNA polymerase n=2 Tax=Sclerotinia sclerotiorum
RepID=A7EKT1_SCLS1
Length = 1746
Score = 53.1 bits (126), Expect(2) = 1e-09
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSG--VSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P +YSP+SP +SPSSP + G SP YSP+SP YSP+ P +SP+S
Sbjct: 1694 PTSPVYSPTSPNWSPSSPQHQGNNTSPKYSPTSP------SYSPTSPNFSPTS 1740
Score = 33.5 bits (75), Expect(2) = 1e-09
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1656 TSPSYSPTSPSYSPTSP 1672
Score = 59.3 bits (142), Expect(2) = 2e-09
Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Frame = -3
Query: 527 SIVFPNISIYSPSSPTYSPSSP--YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 357
S V P YSP+SP YSP+SP + S SP YSP+SP +SP S YSP+ P Y+ + S
Sbjct: 1628 SFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVS 1687
Score = 26.6 bits (57), Expect(2) = 2e-09
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP ++ T P+YSPTSP
Sbjct: 1612 SPAFTPTSPAYSPTSP 1627
Score = 60.1 bits (144), Expect = 1e-07
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 5/63 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQF-----SPSTGYSPSQPGYS 372
P+ S PNI SP+SP+YSP+SP S SP+YSP+SP + SP +G SP+ P YS
Sbjct: 1642 PNYSPTSPNIH-GSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYS 1700
Query: 371 PSS 363
P+S
Sbjct: 1701 PTS 1703
[181][TOP]
>UniRef100_A6SI63 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10
RepID=A6SI63_BOTFB
Length = 1742
Score = 53.1 bits (126), Expect(2) = 1e-09
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSG--VSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P +YSP+SP +SPSSP + G SP YSP+SP YSP+ P +SP+S
Sbjct: 1690 PTSPVYSPTSPNWSPSSPQHQGNSTSPKYSPTSP------SYSPTSPNFSPTS 1736
Score = 33.5 bits (75), Expect(2) = 1e-09
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1652 TSPSYSPTSPSYSPTSP 1668
Score = 59.3 bits (142), Expect(2) = 2e-09
Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Frame = -3
Query: 527 SIVFPNISIYSPSSPTYSPSSP--YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 357
S V P YSP+SP YSP+SP + S SP YSP+SP +SP S YSP+ P Y+ + S
Sbjct: 1624 SFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVS 1683
Score = 26.6 bits (57), Expect(2) = 2e-09
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP ++ T P+YSPTSP
Sbjct: 1608 SPAFTPTSPAYSPTSP 1623
Score = 60.1 bits (144), Expect = 1e-07
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 5/63 (7%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQF-----SPSTGYSPSQPGYS 372
P+ S PNI SP+SP+YSP+SP S SP+YSP+SP + SP +G SP+ P YS
Sbjct: 1638 PNYSPTSPNIH-GSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYS 1696
Query: 371 PSS 363
P+S
Sbjct: 1697 PTS 1699
[182][TOP]
>UniRef100_UPI000023F34A hypothetical protein FG00916.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023F34A
Length = 1758
Score = 56.6 bits (135), Expect(2) = 1e-09
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSG----VSPDYSPSSPQFSPST--GYSPSQPGYSPSSTSQ 354
P YSP+SP YSP+SP G SP YSP+SP +SP++ YSP+ P + S T+Q
Sbjct: 1662 PTSPSYSPASPNYSPTSPNVHGAGGPTSPSYSPASPSWSPTSPEAYSPTSPTFQRSPTTQ 1721
Query: 353 YTP 345
+P
Sbjct: 1722 QSP 1724
Score = 29.6 bits (65), Expect(2) = 1e-09
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPFI 497
TSP++S + PS+SPTSP +
Sbjct: 1605 TSPSFSPSSPSFSPTSPML 1623
Score = 55.8 bits (133), Expect = 2e-06
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 32/96 (33%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSP--------------------YNSGVSPDYSPSSPQ 417
P S P + SP+SP+YSP+SP +NS SP YSP+SP
Sbjct: 1614 PSFSPTSPMLRPTSPASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFNSPTSPSYSPASPN 1673
Query: 416 FSP------------STGYSPSQPGYSPSSTSQYTP 345
+SP S YSP+ P +SP+S Y+P
Sbjct: 1674 YSPTSPNVHGAGGPTSPSYSPASPSWSPTSPEAYSP 1709
Score = 54.7 bits (130), Expect = 4e-06
Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPY---NSGVSPDYSPSSPQFSPSTGYSPSQP-GYSPSSTSQYT 348
P +SPSSP++SP+SP S SP YSP+SP +SP+ SPS P YSP+S +Q+
Sbjct: 1604 PTSPSFSPSSPSFSPTSPMLRPTSPASPSYSPTSPSYSPT---SPSSPRHYSPTSPAQFN 1660
Query: 347 PQTN 336
T+
Sbjct: 1661 SPTS 1664
[183][TOP]
>UniRef100_B2AA31 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
RepID=B2AA31_PODAN
Length = 1748
Score = 58.5 bits (140), Expect(2) = 1e-09
Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 21/78 (26%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSP-------------YNSGVSPDYSPSSPQFSP--------STG 399
P YSP+SP+YSP+SP + S SP YSP+SP +SP S
Sbjct: 1629 PTSPSYSPTSPSYSPASPAATRHYSPTSPAQFQSPTSPSYSPTSPSYSPASPAFQATSPS 1688
Query: 398 YSPSQPGYSPSSTSQYTP 345
YSP+ P +SP+S Y+P
Sbjct: 1689 YSPASPNWSPTSPDAYSP 1706
Score = 27.7 bits (60), Expect(2) = 1e-09
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPFI 497
+SP +S + PS+SPTSP +
Sbjct: 1606 SSPQFSPSSPSFSPTSPML 1624
Score = 57.8 bits (138), Expect(2) = 2e-08
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--GYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP SP YSP+SP +SP++ YSP+ P + S Q +P
Sbjct: 1663 PTSPSYSPTSPSYSPASPAFQATSPSYSPASPNWSPTSPDAYSPTSPTFQRSPGQQMSP 1721
Score = 24.3 bits (51), Expect(2) = 2e-08
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1
Query: 538 SXTFPSYSPTSP 503
S T PSYSPTSP
Sbjct: 1628 SPTSPSYSPTSP 1639
Score = 57.0 bits (136), Expect = 9e-07
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 7/73 (9%)
Frame = -3
Query: 536 PDISIVFPNISIYSPS----SPTYSPSSPYNSGVSPD-YSPSSPQF--SPSTGYSPSQPG 378
P S P+ S SP+ SP+YSP+SP S SPD YSP+SP F SP SP+ PG
Sbjct: 1666 PSYSPTSPSYSPASPAFQATSPSYSPASPNWSPTSPDAYSPTSPTFQRSPGQQMSPTSPG 1725
Query: 377 YSPSSTSQYTPQT 339
YSP+S S ++P+T
Sbjct: 1726 YSPTSPS-FSPRT 1737
[184][TOP]
>UniRef100_B2W4S0 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2W4S0_PYRTR
Length = 1742
Score = 58.2 bits (139), Expect(2) = 1e-09
Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Frame = -3
Query: 515 PNISIYSPSSPT-YSPSSPYNSGVSPDYSPSSPQF---SPSTGYSPSQPGYSPSSTSQYT 348
P YSP+SP YSP+SP S SP+YSP+SP F + S YSP+ P YSP+S QY+
Sbjct: 1622 PTSPSYSPTSPAGYSPTSPQYSPTSPNYSPTSPTFMGGATSPAYSPTSPQYSPTS-PQYS 1680
Query: 347 P 345
P
Sbjct: 1681 P 1681
Score = 28.1 bits (61), Expect(2) = 1e-09
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP +S T P YSPTSP
Sbjct: 1574 SPGFSPTSPGYSPTSP 1589
Score = 54.3 bits (129), Expect(2) = 1e-08
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPY----------NSGVSPDYSPSSPQFSPST---GYSPSQPGY 375
P YSP+SP YSP+SP S SP YSP+SP++SP++ +SP+ P Y
Sbjct: 1667 PTSPQYSPTSPQYSPTSPQYQATSDRRSPTSPTSPQYSPTSPRYSPTSPAGSFSPTSPRY 1726
Query: 374 SPSSTSQYTPQTNDK 330
SP+S T+ K
Sbjct: 1727 SPTSPGPAYSPTSPK 1741
Score = 28.5 bits (62), Expect(2) = 1e-08
Identities = 14/18 (77%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
Frame = -1
Query: 553 TSPNY-SXTFPSYSPTSP 503
TSP Y S T PSYSPTSP
Sbjct: 1615 TSPRYGSPTSPSYSPTSP 1632
Score = 49.3 bits (116), Expect(2) = 9e-08
Identities = 33/69 (47%), Positives = 38/69 (55%), Gaps = 15/69 (21%)
Frame = -3
Query: 515 PNISIYSPSSPTY----------SPSSPYNSGVSPDYSPSSP--QFSP-STGYSPSQPG- 378
P YSP+SP Y SP+SP S SP YSP+SP FSP S YSP+ PG
Sbjct: 1674 PTSPQYSPTSPQYQATSDRRSPTSPTSPQYSPTSPRYSPTSPAGSFSPTSPRYSPTSPGP 1733
Query: 377 -YSPSSTSQ 354
YSP+S Q
Sbjct: 1734 AYSPTSPKQ 1742
Score = 30.8 bits (68), Expect(2) = 9e-08
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 1661 TSPAYSPTSPQYSPTSP 1677
Score = 52.8 bits (125), Expect(2) = 1e-07
Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 12/64 (18%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDY----------SPSSPQFSP-STGYSPSQPGYSPSSTS- 357
YSP+SP YSP+SP S SP Y SP+SPQ+SP S YSP+ P S S TS
Sbjct: 1665 YSPTSPQYSPTSPQYSPTSPQYQATSDRRSPTSPTSPQYSPTSPRYSPTSPAGSFSPTSP 1724
Query: 356 QYTP 345
+Y+P
Sbjct: 1725 RYSP 1728
Score = 26.9 bits (58), Expect(2) = 1e-07
Identities = 13/18 (72%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
Frame = -1
Query: 553 TSPNYSXTFPSY-SPTSP 503
TSP+YS T P Y SPTSP
Sbjct: 1608 TSPHYSPTSPRYGSPTSP 1625
[185][TOP]
>UniRef100_Q2HDK0 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2HDK0_CHAGB
Length = 1756
Score = 57.8 bits (138), Expect(2) = 2e-09
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 17/83 (20%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-----------------GYSPS 387
P YSP+SP+YSP+SP SP YSP+SP +SP++ SP+
Sbjct: 1661 PTSPSYSPTSPSYSPASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSFHRSPGQQMSPT 1720
Query: 386 QPGYSPSSTSQYTPQTNDKDERG 318
PGYSP+S S ++P+T + G
Sbjct: 1721 SPGYSPTSPS-FSPRTPGRGPSG 1742
Score = 27.7 bits (60), Expect(2) = 2e-09
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPFI 497
+SP +S + PS+SPTSP +
Sbjct: 1604 SSPQFSPSSPSFSPTSPML 1622
Score = 55.8 bits (133), Expect = 2e-06
Identities = 33/92 (35%), Positives = 43/92 (46%), Gaps = 28/92 (30%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSP--------------------YNSGVSPDYSPSSPQ 417
P S P + SP+SP YSP+SP +NS SP YSP+SP
Sbjct: 1613 PSFSPTSPMLRPGSPTSPNYSPTSPSYSPASPAATRHYSPTSPQQFNSPTSPSYSPTSPS 1672
Query: 416 FSP--------STGYSPSQPGYSPSSTSQYTP 345
+SP S YSP+ P +SP+S Y+P
Sbjct: 1673 YSPASPNLHATSPSYSPASPTWSPTSPDAYSP 1704
[186][TOP]
>UniRef100_C6F0A3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0A3_PLAFA
Length = 195
Score = 56.6 bits (135), Expect(2) = 3e-09
Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P ++ Y+P
Sbjct: 49 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSP 106
Score = 28.5 bits (62), Expect(2) = 3e-09
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSPTSP
Sbjct: 37 SPVYSVTSPKYSPTSP 52
Score = 62.0 bits (149), Expect = 3e-08
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P S+ P YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 38 PVYSVTSPK---YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 93
Score = 54.7 bits (130), Expect(2) = 2e-07
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = -3
Query: 506 SIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
S Y+ SP YS +SP S SP YSP+SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 31 SQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 84
Score = 47.4 bits (111), Expect(2) = 2e-07
Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGV-SPDYSP---SSPQFSP-STGYSPSQPGYSPS 366
P YSP+SP YSP+SP + SP+YSP +SP+FSP S YS S P Y S
Sbjct: 77 PTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYSISSPVYDKS 131
Score = 31.6 bits (70), Expect(2) = 2e-07
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 43 TSPKYSPTSPKYSPTSP 59
Score = 24.3 bits (51), Expect(2) = 2e-07
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ YSPTSP
Sbjct: 4 TSPTYNANNAYYSPTSP 20
[187][TOP]
>UniRef100_Q54LJ4 Type A von Willebrand factor domain-containing protein n=1
Tax=Dictyostelium discoideum RepID=Q54LJ4_DICDI
Length = 2563
Score = 50.8 bits (120), Expect(2) = 5e-09
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNS------GVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 357
P YSP+SP+YSP+SP S S YSP SP ++P S Y+P+ P YSP S S
Sbjct: 1869 PTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVSPSYTPTSLLYAPTIPSYSPVSPS 1928
Query: 356 QYTPQTNDK 330
Y P K
Sbjct: 1929 -YAPTKPSK 1936
Score = 33.5 bits (75), Expect(2) = 5e-09
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1856 TSPSYSPTSPSYSPTSP 1872
Score = 53.9 bits (128), Expect(2) = 9e-09
Identities = 26/51 (50%), Positives = 31/51 (60%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 363
P YSP+SP+YSP+SP S SP YS S S S YSP P Y+P+S
Sbjct: 1862 PTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVSPSYTPTS 1912
Score = 29.6 bits (65), Expect(2) = 9e-09
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y T PSYSPTSP
Sbjct: 1849 TSPFYIPTSPSYSPTSP 1865
Score = 61.6 bits (148), Expect = 4e-08
Identities = 36/70 (51%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS-- 366
P S+ F YSP+SP Y P+SP S SP YSP+SP +SP S YSP+ P YS S
Sbjct: 1834 PPPSLFFQASQPYSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPL 1893
Query: 365 --STSQ-YTP 345
STSQ Y+P
Sbjct: 1894 YASTSQSYSP 1903
Score = 47.8 bits (112), Expect(2) = 4e-08
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--------TGYSPSQPGYSPSSTSQ 354
YSP SP+Y+P+S + P YSP SP ++P+ T YSPS P +S S +
Sbjct: 1901 YSPVSPSYTPTSLLYAPTIPSYSPVSPSYAPTKPSKLPVLTSYSPSSPSFSKSKAKE 1957
Score = 33.5 bits (75), Expect(2) = 4e-08
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T PSYSPTSP
Sbjct: 1863 TSPSYSPTSPSYSPTSP 1879
Score = 60.8 bits (146), Expect = 6e-08
Identities = 31/64 (48%), Positives = 38/64 (59%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 357
P P YSP+SP+YSP+SP S SP YSP+SP +S S Y+ + YSP S S
Sbjct: 1848 PTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVSPS 1907
Query: 356 QYTP 345
YTP
Sbjct: 1908 -YTP 1910
[188][TOP]
>UniRef100_C8VQG7 DNA-directed RNA polymerase (EC 2.7.7.6)
[Source:UniProtKB/TrEMBL;Acc:Q873Q6] n=2 Tax=Emericella
nidulans RepID=C8VQG7_EMENI
Length = 1745
Score = 50.1 bits (118), Expect(2) = 7e-09
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 10/63 (15%)
Frame = -3
Query: 512 NISIYSPSSPTYSPSSPYNSGVSPD-YSPSSPQFS---------PSTGYSPSQPGYSPSS 363
++S SP+SP Y+P+SP S SP YSP+SP F+ S GYSP+ P +SP+S
Sbjct: 1683 HLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSPTS 1742
Query: 362 TSQ 354
Q
Sbjct: 1743 PRQ 1745
Score = 33.9 bits (76), Expect(2) = 7e-09
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PS+SPTSP
Sbjct: 1646 TSPNYSPTSPSFSPTSP 1662
Score = 56.6 bits (135), Expect(2) = 9e-09
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTY---SPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYT 348
P YSP+SP Y SP+SP S SP +SP+SP +SP S +SP+ P +SP+S S Y+
Sbjct: 1614 PTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPS-YS 1672
Query: 347 P 345
P
Sbjct: 1673 P 1673
Score = 26.9 bits (58), Expect(2) = 9e-09
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP +S PS++PTSP
Sbjct: 1601 TSPGFSPASPSFAPTSP 1617
Score = 61.2 bits (147), Expect = 5e-08
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P S P SP+SP+YSP+SP S SP+YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1617 PAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSYSPTS 1675
Score = 58.2 bits (139), Expect = 4e-07
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 10/74 (13%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP------QFSP----STGYSPS 387
P S PN YSP+SP++SP+SP S SP YSP+SP SP S Y+P+
Sbjct: 1641 PGFSPTSPN---YSPTSPSFSPTSPAFSPTSPSYSPTSPAIGGARHLSPTSPTSPKYTPT 1697
Query: 386 QPGYSPSSTSQYTP 345
PG+SP+S Y+P
Sbjct: 1698 SPGWSPTSPQTYSP 1711
Score = 55.5 bits (132), Expect = 3e-06
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 4/52 (7%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDY---SPSSPQFSP-STGYSPSQPGYSPSSTS 357
+SP+SP+++P+SP S SP Y SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1605 FSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPS 1656
Score = 54.7 bits (130), Expect = 4e-06
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
Frame = -3
Query: 500 YSPSSPTYSPSSP---YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
++P+SP YSP+SP S SP YSP+SP FSP S YSP+ P +SP+S
Sbjct: 1612 FAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPTS 1661
[189][TOP]
>UniRef100_Q8MX30 DNA-directed RNA polymerase (Fragment) n=1 Tax=Naegleria gruberi
RepID=Q8MX30_NAEGR
Length = 1590
Score = 63.9 bits (154), Expect = 7e-09
Identities = 30/47 (63%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
YSP+SP YSPSSP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1540 YSPTSPAYSPSSPNYSPTSPAYSPTSPNYSPTSPAYSPTSPNYSPTS 1586
Score = 61.2 bits (147), Expect = 5e-08
Identities = 29/49 (59%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 372
P YSPSSP YSP+SP S SP+YSP+SP +SP S YSP+ P YS
Sbjct: 1542 PTSPAYSPSSPNYSPTSPAYSPTSPNYSPTSPAYSPTSPNYSPTSPAYS 1590
Score = 60.5 bits (145), Expect = 8e-08
Identities = 32/54 (59%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
Frame = -3
Query: 500 YSPSSP-TYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
YSPSSP YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1532 YSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNYSPTSPAYSPTSPN-YSP 1584
[190][TOP]
>UniRef100_A1CNZ4 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
RepID=A1CNZ4_ASPCL
Length = 1765
Score = 56.6 bits (135), Expect(2) = 9e-09
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTY---SPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYT 348
P YSP+SP Y SP+SP S SP +SP+SP +SP S +SP+ P +SP+S S Y+
Sbjct: 1622 PTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPS-YS 1680
Query: 347 P 345
P
Sbjct: 1681 P 1681
Score = 26.9 bits (58), Expect(2) = 9e-09
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP +S PS++PTSP
Sbjct: 1609 TSPGFSPVSPSFAPTSP 1625
Score = 50.8 bits (120), Expect(2) = 1e-08
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
Frame = -3
Query: 512 NISIYSPSSPTYSPSSPYNSGVSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 363
++S SP+SP Y+P+SP S SP YSP+SP F SP++ P+ PGYSP+S
Sbjct: 1692 HLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTS 1744
Score = 32.0 bits (71), Expect(2) = 1e-08
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PS+SP SP
Sbjct: 1654 TSPNYSPTSPSFSPASP 1670
Score = 61.2 bits (147), Expect = 5e-08
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P S P SP+SP+YSP+SP S SP+YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1625 PAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1683
Score = 57.8 bits (138), Expect = 5e-07
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 11/75 (14%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP-------QFSP----STGYSP 390
P S PN YSP+SP++SP+SP S SP YSP+SP SP S Y+P
Sbjct: 1649 PGFSPTSPN---YSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTP 1705
Query: 389 SQPGYSPSSTSQYTP 345
+ PG+SP+S Y+P
Sbjct: 1706 TSPGWSPTSPQTYSP 1720
Score = 55.8 bits (133), Expect = 2e-06
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSP---YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSP 369
P S V P+ ++P+SP YSP+SP S SP YSP+SP FSP S YSP+ P +SP
Sbjct: 1611 PGFSPVSPS---FAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSP 1667
Query: 368 SS 363
+S
Sbjct: 1668 AS 1669
Score = 54.3 bits (129), Expect = 6e-06
Identities = 27/52 (51%), Positives = 37/52 (71%), Gaps = 4/52 (7%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDY---SPSSPQFSP-STGYSPSQPGYSPSSTS 357
+SP SP+++P+SP S SP Y SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1613 FSPVSPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPS 1664
[191][TOP]
>UniRef100_B0XMU6 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus
RepID=B0XMU6_ASPFC
Length = 1750
Score = 56.6 bits (135), Expect(2) = 9e-09
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTY---SPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYT 348
P YSP+SP Y SP+SP S SP +SP+SP +SP S +SP+ P +SP+S S Y+
Sbjct: 1615 PTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPS-YS 1673
Query: 347 P 345
P
Sbjct: 1674 P 1674
Score = 26.9 bits (58), Expect(2) = 9e-09
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP +S PS++PTSP
Sbjct: 1602 TSPGFSPASPSFAPTSP 1618
Score = 61.2 bits (147), Expect = 5e-08
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P S P SP+SP+YSP+SP S SP+YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1618 PAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1676
Score = 48.9 bits (115), Expect(2) = 5e-08
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 10/69 (14%)
Frame = -3
Query: 512 NISIYSPSSPTYSPSSPYNSGVSPD-YSPSSPQFS---------PSTGYSPSQPGYSPSS 363
++S SP+SP Y+P+SP S SP YSP+SP F+ S GYSP+ P +SPS
Sbjct: 1685 HLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSPS- 1743
Query: 362 TSQYTPQTN 336
Y P ++
Sbjct: 1744 ---YVPSSS 1749
Score = 32.0 bits (71), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PS+SP SP
Sbjct: 1647 TSPNYSPTSPSFSPASP 1663
Score = 57.8 bits (138), Expect = 5e-07
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 11/75 (14%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP-------QFSP----STGYSP 390
P S PN YSP+SP++SP+SP S SP YSP+SP SP S Y+P
Sbjct: 1642 PGFSPTSPN---YSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTP 1698
Query: 389 SQPGYSPSSTSQYTP 345
+ PG+SP+S Y+P
Sbjct: 1699 TSPGWSPTSPQTYSP 1713
Score = 55.5 bits (132), Expect = 3e-06
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 4/52 (7%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDY---SPSSPQFSP-STGYSPSQPGYSPSSTS 357
+SP+SP+++P+SP S SP Y SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1606 FSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPS 1657
Score = 54.7 bits (130), Expect = 4e-06
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
Frame = -3
Query: 500 YSPSSPTYSPSSP---YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
++P+SP YSP+SP S SP YSP+SP FSP S YSP+ P +SP+S
Sbjct: 1613 FAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPAS 1662
[192][TOP]
>UniRef100_A1D1U9 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D1U9_NEOFI
Length = 1750
Score = 56.6 bits (135), Expect(2) = 9e-09
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTY---SPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYT 348
P YSP+SP Y SP+SP S SP +SP+SP +SP S +SP+ P +SP+S S Y+
Sbjct: 1615 PTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPS-YS 1673
Query: 347 P 345
P
Sbjct: 1674 P 1674
Score = 26.9 bits (58), Expect(2) = 9e-09
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP +S PS++PTSP
Sbjct: 1602 TSPGFSPASPSFAPTSP 1618
Score = 61.2 bits (147), Expect = 5e-08
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P S P SP+SP+YSP+SP S SP+YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1618 PAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1676
Score = 48.9 bits (115), Expect(2) = 5e-08
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 10/69 (14%)
Frame = -3
Query: 512 NISIYSPSSPTYSPSSPYNSGVSPD-YSPSSPQFS---------PSTGYSPSQPGYSPSS 363
++S SP+SP Y+P+SP S SP YSP+SP F+ S GYSP+ P +SPS
Sbjct: 1685 HLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSPS- 1743
Query: 362 TSQYTPQTN 336
Y P ++
Sbjct: 1744 ---YVPSSS 1749
Score = 32.0 bits (71), Expect(2) = 5e-08
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PS+SP SP
Sbjct: 1647 TSPNYSPTSPSFSPASP 1663
Score = 57.8 bits (138), Expect = 5e-07
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 11/75 (14%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP-------QFSP----STGYSP 390
P S PN YSP+SP++SP+SP S SP YSP+SP SP S Y+P
Sbjct: 1642 PGFSPTSPN---YSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTP 1698
Query: 389 SQPGYSPSSTSQYTP 345
+ PG+SP+S Y+P
Sbjct: 1699 TSPGWSPTSPQTYSP 1713
Score = 55.5 bits (132), Expect = 3e-06
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 4/52 (7%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDY---SPSSPQFSP-STGYSPSQPGYSPSSTS 357
+SP+SP+++P+SP S SP Y SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1606 FSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPS 1657
Score = 54.7 bits (130), Expect = 4e-06
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
Frame = -3
Query: 500 YSPSSPTYSPSSP---YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
++P+SP YSP+SP S SP YSP+SP FSP S YSP+ P +SP+S
Sbjct: 1613 FAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPAS 1662
[193][TOP]
>UniRef100_Q9HGZ5 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=Q9HGZ5_ASPOR
Length = 1748
Score = 56.6 bits (135), Expect(2) = 9e-09
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTY---SPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYT 348
P YSP+SP Y SP+SP S SP +SP+SP +SP S +SP+ P +SP+S S Y+
Sbjct: 1616 PTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPS-YS 1674
Query: 347 P 345
P
Sbjct: 1675 P 1675
Score = 26.9 bits (58), Expect(2) = 9e-09
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP +S PS++PTSP
Sbjct: 1603 TSPGFSPASPSFAPTSP 1619
Score = 61.2 bits (147), Expect = 5e-08
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P S P SP+SP+YSP+SP S SP+YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1619 PAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1677
Score = 57.8 bits (138), Expect = 5e-07
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 11/75 (14%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP-------QFSP----STGYSP 390
P S PN YSP+SP++SP+SP S SP YSP+SP SP S Y+P
Sbjct: 1643 PGFSPTSPN---YSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAARHLSPTSPTSPKYTP 1699
Query: 389 SQPGYSPSSTSQYTP 345
+ PG+SP+S Y+P
Sbjct: 1700 TSPGWSPTSPQTYSP 1714
Score = 57.0 bits (136), Expect = 9e-07
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 8/68 (11%)
Frame = -3
Query: 536 PDISIVFPNISI----YSPSSPTYSPSSPYNSGVSPDY---SPSSPQFSP-STGYSPSQP 381
P +++ P S+ +SP+SP+++P+SP S SP Y SP+SP +SP S G+SP+ P
Sbjct: 1591 PGMAMTSPRFSMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSP 1650
Query: 380 GYSPSSTS 357
YSP+S S
Sbjct: 1651 NYSPTSPS 1658
Score = 55.5 bits (132), Expect = 3e-06
Identities = 33/66 (50%), Positives = 39/66 (59%), Gaps = 8/66 (12%)
Frame = -3
Query: 536 PDISIVFPNISIYSPS----SPTYSPSSP---YNSGVSPDYSPSSPQFSP-STGYSPSQP 381
P S+ P S SPS SP YSP+SP S SP YSP+SP FSP S YSP+ P
Sbjct: 1598 PRFSMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSP 1657
Query: 380 GYSPSS 363
+SP+S
Sbjct: 1658 SFSPAS 1663
[194][TOP]
>UniRef100_A2QAT7 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2QAT7_ASPNC
Length = 1747
Score = 56.6 bits (135), Expect(2) = 9e-09
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTY---SPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYT 348
P YSP+SP Y SP+SP S SP +SP+SP +SP S +SP+ P +SP+S S Y+
Sbjct: 1615 PTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPS-YS 1673
Query: 347 P 345
P
Sbjct: 1674 P 1674
Score = 26.9 bits (58), Expect(2) = 9e-09
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP +S PS++PTSP
Sbjct: 1602 TSPGFSPASPSFAPTSP 1618
Score = 61.2 bits (147), Expect = 5e-08
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P S P SP+SP+YSP+SP S SP+YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1618 PAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1676
Score = 55.5 bits (132), Expect(2) = 9e-08
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 4/52 (7%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDY---SPSSPQFSP-STGYSPSQPGYSPSSTS 357
+SP+SP+++P+SP S SP Y SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1606 FSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPS 1657
Score = 24.6 bits (52), Expect(2) = 9e-08
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP + T P +SP SP
Sbjct: 1595 TSPRFMSTSPGFSPASP 1611
Score = 57.8 bits (138), Expect = 5e-07
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 11/75 (14%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP-------QFSP----STGYSP 390
P S PN YSP+SP++SP+SP S SP YSP+SP SP S Y+P
Sbjct: 1642 PGFSPTSPN---YSPTSPSFSPASPAFSPTSPSYSPTSPAVGGVGRHLSPTSPTSPKYTP 1698
Query: 389 SQPGYSPSSTSQYTP 345
+ PG+SP+S Y+P
Sbjct: 1699 TSPGWSPTSPQTYSP 1713
Score = 54.7 bits (130), Expect(2) = 3e-06
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
Frame = -3
Query: 500 YSPSSPTYSPSSP---YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
++P+SP YSP+SP S SP YSP+SP FSP S YSP+ P +SP+S
Sbjct: 1613 FAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPAS 1662
Score = 20.4 bits (41), Expect(2) = 3e-06
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP + T P + TSP
Sbjct: 1588 TSPGMAITSPRFMSTSP 1604
[195][TOP]
>UniRef100_B0DB45 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0DB45_LACBS
Length = 1742
Score = 58.2 bits (139), Expect(2) = 9e-09
Identities = 28/51 (54%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = -3
Query: 506 SIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 357
S +P+SPTYSP+SP + SP YSP+SP++SP S +SP+ P YSP S S
Sbjct: 1593 SARNPTSPTYSPTSPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPS 1643
Score = 25.4 bits (54), Expect(2) = 9e-09
Identities = 12/19 (63%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = -1
Query: 553 TSPN-YSXTFPSYSPTSPF 500
+SPN YS T PS+ P SPF
Sbjct: 1554 SSPNVYSPTSPSFVPQSPF 1572
Score = 60.8 bits (146), Expect = 6e-08
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P +++ P YSP+SP YSP+SP S SP YSP SP FSP S YSP+ P +SP+S
Sbjct: 1607 PALNLTSPG---YSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPAS 1662
Score = 55.5 bits (132), Expect = 3e-06
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 8/61 (13%)
Frame = -3
Query: 515 PNISIYSPSSPT-------YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P YSP+SP YSP+SP S SP +SP+SP++SP S +SP+ P YSP+S
Sbjct: 1597 PTSPTYSPTSPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSP 1656
Query: 359 S 357
S
Sbjct: 1657 S 1657
[196][TOP]
>UniRef100_B6H9U6 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6H9U6_PENCW
Length = 1733
Score = 51.6 bits (122), Expect(2) = 9e-09
Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 7/60 (11%)
Frame = -3
Query: 512 NISIYSPSSPTYSPSSPYNSGVSPD-YSPSSPQFS------PSTGYSPSQPGYSPSSTSQ 354
++S SP+SP Y+P+SP S SP YSP+SP FS S YSP+ P YSP+S Q
Sbjct: 1674 HLSPTSPTSPKYTPTSPGWSPTSPQSYSPTSPNFSGSPTSPTSPAYSPTSPAYSPTSPRQ 1733
Score = 32.0 bits (71), Expect(2) = 9e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSPNYS T PS+SP SP
Sbjct: 1637 TSPNYSPTSPSFSPASP 1653
Score = 56.6 bits (135), Expect(2) = 2e-08
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTY---SPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYT 348
P YSP+SP Y SP+SP S SP +SP+SP +SP S +SP+ P +SP+S S Y+
Sbjct: 1605 PTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPS-YS 1663
Query: 347 P 345
P
Sbjct: 1664 P 1664
Score = 25.4 bits (54), Expect(2) = 2e-08
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP +S P++ PTSP
Sbjct: 1592 TSPGFSPASPTFQPTSP 1608
Score = 61.2 bits (147), Expect = 5e-08
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P S P SP+SP+YSP+SP S SP+YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1608 PAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1666
Score = 56.6 bits (135), Expect(2) = 2e-07
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 4/52 (7%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDY---SPSSPQFSP-STGYSPSQPGYSPSSTS 357
+SP+SPT+ P+SP S SP Y SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1596 FSPASPTFQPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPS 1647
Score = 22.3 bits (46), Expect(2) = 2e-07
Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -1
Query: 553 TSP-NYSXTFPSYSPTSPF 500
TSP N S T P YSP+S +
Sbjct: 1563 TSPFNTSPTSPGYSPSSSY 1581
Score = 58.5 bits (140), Expect = 3e-07
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 10/74 (13%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP------QFSP----STGYSPS 387
P S PN YSP+SP++SP+SP S SP YSP+SP SP S Y+P+
Sbjct: 1632 PGFSPTSPN---YSPTSPSFSPASPAFSPTSPSYSPTSPAIGGARHLSPTSPTSPKYTPT 1688
Query: 386 QPGYSPSSTSQYTP 345
PG+SP+S Y+P
Sbjct: 1689 SPGWSPTSPQSYSP 1702
Score = 54.7 bits (130), Expect = 4e-06
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSP---YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P + P+SP YSP+SP S SP YSP+SP FSP S YSP+ P +SP+S
Sbjct: 1598 PASPTFQPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPAS 1652
[197][TOP]
>UniRef100_UPI000151A8B4 hypothetical protein PGUG_01106 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B4
Length = 224
Score = 60.8 bits (146), Expect(2) = 2e-08
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS 366
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+
Sbjct: 135 YSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPN 180
Score = 21.9 bits (45), Expect(2) = 2e-08
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 526 PSYSPTSP 503
PSYSPTSP
Sbjct: 133 PSYSPTSP 140
Score = 58.2 bits (139), Expect = 4e-07
Identities = 29/49 (59%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = -3
Query: 488 SPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 132 SPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPS-YSP 179
[198][TOP]
>UniRef100_A5DCV1 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DCV1_PICGU
Length = 224
Score = 62.4 bits (150), Expect = 2e-08
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS 366
YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+
Sbjct: 135 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPN 180
Score = 58.9 bits (141), Expect = 2e-07
Identities = 29/49 (59%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = -3
Query: 488 SPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 132 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 179
Score = 43.5 bits (101), Expect(2) = 3e-06
Identities = 24/57 (42%), Positives = 31/57 (54%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 345
P YSP+SP+YSP+SP S SP YSP+ Q + P+ Y PS + TP
Sbjct: 151 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPNVAQLLTN---FPTVLTYFPSLLTHVTP 204
Score = 31.6 bits (70), Expect(2) = 3e-06
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP+YS T PSYSPTSP
Sbjct: 132 SPSYSPTSPSYSPTSP 147
[199][TOP]
>UniRef100_Q0D054 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0D054_ASPTN
Length = 1742
Score = 51.6 bits (122), Expect(2) = 2e-08
Identities = 29/59 (49%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Frame = -3
Query: 512 NISIYSPSSPTYSPSSPYNSGVSPD-YSPSSPQF-----SPSTGYSPSQPGYSPSSTSQ 354
N+S SP+SP Y+P+SP S SP YSP+SP SP YSP+ P YSP+S Q
Sbjct: 1684 NMSPTSPTSPKYTPTSPGWSPTSPQSYSPTSPNIGGSPTSPGGAYSPTSPTYSPTSPRQ 1742
Score = 30.4 bits (67), Expect(2) = 2e-08
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP+YS T P +SPTSP
Sbjct: 1633 TSPSYSPTSPGFSPTSP 1649
Score = 53.9 bits (128), Expect(2) = 1e-07
Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Frame = -3
Query: 515 PNISIYSPSSPTY---SPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYT 348
P YSP+SP Y SP+SP S SP +SP+SP +SP S SP+ P +SP+S S Y+
Sbjct: 1615 PTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPNLSPASPVFSPTSPS-YS 1673
Query: 347 P 345
P
Sbjct: 1674 P 1674
Score = 25.4 bits (54), Expect(2) = 1e-07
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP +S P++ PTSP
Sbjct: 1602 TSPGFSPASPAFGPTSP 1618
Score = 57.8 bits (138), Expect = 5e-07
Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
P S P SP+SP+YSP+SP S SP+YSP+SP SP S +SP+ P YSP+S
Sbjct: 1618 PAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPNLSPASPVFSPTSPSYSPTS 1676
Score = 57.0 bits (136), Expect = 9e-07
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSP------QFSP----STGYSPS 387
P S PN YSP+SP SP+SP S SP YSP+SP SP S Y+P+
Sbjct: 1642 PGFSPTSPN---YSPTSPNLSPASPVFSPTSPSYSPTSPALGAGRNMSPTSPTSPKYTPT 1698
Query: 386 QPGYSPSSTSQYTP 345
PG+SP+S Y+P
Sbjct: 1699 SPGWSPTSPQSYSP 1712
[200][TOP]
>UniRef100_Q9FI54 Genomic DNA, chromosome 5, TAC clone:K3K7 n=1 Tax=Arabidopsis
thaliana RepID=Q9FI54_ARATH
Length = 314
Score = 50.8 bits (120), Expect(2) = 3e-08
Identities = 38/121 (31%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTN 336
PN S SP S +YSP SP +S VSP YSP+S SP P GY P +T+
Sbjct: 129 PNSSSDSPDSHSYSPVSPDHSLVSPQYSPTSTHHSPILSSPPEDYGYGPDDIEAGKMKTD 188
Query: 335 DKDERGKD*WR---RSMRQFEARRSILQFCREGTLRCSWSISLLCINHLISKTLFDIKFE 165
E G R+ + E R+I C + L + +L + H + + +K
Sbjct: 189 QLKEIGDGSSHVDGRNYHKAETTRTIHVSCPKVDLLVGAAATLRFLQHNLCAQIRILKDS 248
Query: 164 E 162
E
Sbjct: 249 E 249
Score = 31.2 bits (69), Expect(2) = 3e-08
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T PSYSPTSP
Sbjct: 110 SPTYSPTSPSYSPTSP 125
[201][TOP]
>UniRef100_C6F0B0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0B0_PLAFA
Length = 188
Score = 53.5 bits (127), Expect(2) = 3e-08
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--GYSPSQPGYSPSS 363
P YSP+SP YSP+SP S SP YSP+SP++SP++ + + P YSP S
Sbjct: 49 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYS 101
Score = 28.5 bits (62), Expect(2) = 3e-08
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 550 SPNYSXTFPSYSPTSP 503
SP YS T P YSPTSP
Sbjct: 37 SPVYSVTSPKYSPTSP 52
Score = 54.7 bits (130), Expect(2) = 2e-07
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = -3
Query: 506 SIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
S Y+ SP YS +SP S SP YSP+SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 31 SQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 84
Score = 47.4 bits (111), Expect(2) = 2e-07
Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGV-SPDYSP---SSPQFSP-STGYSPSQPGYSPS 366
P YSP+SP YSP+SP + SP+YSP +SP+FSP S YS S P Y S
Sbjct: 70 PTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYSISSPVYDKS 124
Score = 31.6 bits (70), Expect(2) = 2e-07
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP YS T P YSPTSP
Sbjct: 43 TSPKYSPTSPKYSPTSP 59
Score = 24.3 bits (51), Expect(2) = 2e-07
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP Y+ YSPTSP
Sbjct: 4 TSPTYNANNAYYSPTSP 20
Score = 56.6 bits (135), Expect = 1e-06
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSST 360
P S+ P YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P ++
Sbjct: 38 PVYSVTSPK---YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIAS 94
Query: 359 SQYTP 345
Y+P
Sbjct: 95 PNYSP 99
[202][TOP]
>UniRef100_C6F1F6 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F6_PLAVI
Length = 211
Score = 62.0 bits (149), Expect = 3e-08
Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Frame = -3
Query: 527 SIVFPNISI----YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 363
S+V P S+ SP+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSPSS
Sbjct: 50 SVVSPVYSVTSPKXSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSS 109
Query: 362 TSQYTPQT 339
P +
Sbjct: 110 PVPNNPSS 117
Score = 59.3 bits (142), Expect = 2e-07
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 345
P YSP+SP YSP+SP S SP YSP+SP++SP S YSPS P + S+ Y+P
Sbjct: 65 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSP 122
Score = 55.5 bits (132), Expect = 3e-06
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Frame = -3
Query: 521 VFPNISIY-SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS----- 363
V PN+ Y S SP YS +SP S SP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 41 VNPNMMKYHSVVSPVYSVTSPKXSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 100
Query: 362 -TSQYTPQT 339
+ QY+P +
Sbjct: 101 TSPQYSPSS 109
[203][TOP]
>UniRef100_A8N128 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130
RepID=A8N128_COPC7
Length = 1642
Score = 54.3 bits (129), Expect(2) = 9e-08
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 9/70 (12%)
Frame = -3
Query: 500 YSPSSPTYSPSSP---------YNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYT 348
YSP+SP +SP+SP + S SP+YSP+SP +SP+ P+ P YSPSS + ++
Sbjct: 1561 YSPTSPGFSPTSPNGYSPQSPNFGSPASPNYSPASPSYSPA----PASPNYSPSSPT-WS 1615
Query: 347 PQTNDKDERG 318
P + D+ G
Sbjct: 1616 PTSPAHDQNG 1625
Score = 25.8 bits (55), Expect(2) = 9e-08
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
TSP T P+YSPTSP
Sbjct: 1550 TSPIAGLTSPAYSPTSP 1566
Score = 55.1 bits (131), Expect(2) = 2e-06
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = -3
Query: 491 SSPTYSPSSPYNSGVSPDYSPSSPQFSPST--GYSPSQPGYSPSSTSQYTP 345
+SPTYSP+SP SP YSP+SP FSP++ GYSP P + ++ Y+P
Sbjct: 1543 TSPTYSPTSPIAGLTSPAYSPTSPGFSPTSPNGYSPQSPNFGSPASPNYSP 1593
Score = 20.4 bits (41), Expect(2) = 2e-06
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSPF 500
TSP P +PTSPF
Sbjct: 1509 TSPGMVPRSPYGAPTSPF 1526
[204][TOP]
>UniRef100_C9SR21 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SR21_9PEZI
Length = 1756
Score = 58.9 bits (141), Expect = 2e-07
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPTYSPSSPYNSGVSPD--YSPSSPQFS-PSTGYSPSQPGYSPS 366
P S PN+ P+SP+YSP+SP S SP+ YSP+SP F P+ SP+ P YSP+
Sbjct: 1670 PSYSPTSPNLHGAGPTSPSYSPASPSWSPTSPEHSYSPTSPSFQRPAMQQSPTSPNYSPT 1729
Query: 365 STSQYTPQTNDKDERGK 315
S S ++P+T GK
Sbjct: 1730 SPS-FSPRTPGPSGSGK 1745
Score = 57.4 bits (137), Expect = 7e-07
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
Frame = -3
Query: 536 PDISIVFPNISIYSPSSPT-YSPSSP--YNSGVSPDYSPSSPQFSPST----GYSPSQPG 378
P+ S P+ S SP+SP YSP+SP +NS SP YSP+SP +SP++ G P+ P
Sbjct: 1629 PNYSPTSPSYSPTSPTSPRHYSPTSPAQFNSPTSPSYSPASPSYSPTSPNLHGAGPTSPS 1688
Query: 377 YSPSSTS 357
YSP+S S
Sbjct: 1689 YSPASPS 1695
Score = 54.7 bits (130), Expect = 4e-06
Identities = 27/58 (46%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
Frame = -3
Query: 500 YSPSSPTYSPSSPYN---SGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTN 336
+SPSSP++SP+SP + S SP+YSP+SP +SP++ SP YSP+S +Q+ T+
Sbjct: 1607 FSPSSPSFSPTSPVHRPTSPASPNYSPTSPSYSPTSPTSPRH--YSPTSPAQFNSPTS 1662
[205][TOP]
>UniRef100_A7TTU2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Vanderwaltozyma
polyspora DSM 70294 RepID=A7TTU2_VANPO
Length = 1311
Score = 44.7 bits (104), Expect(2) = 7e-06
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = -3
Query: 515 PNISIYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQP 381
P YSP+SP+YSP+S S S YSP+SP +S + ++P P
Sbjct: 1234 PTSPSYSPTSPSYSPTSTSYSQTSSSYSPTSPSYSQNLHHTPKIP 1278
Score = 28.9 bits (63), Expect(2) = 7e-06
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 553 TSPNYSXTFPSYSPTSP 503
+SP +S T P+YSPTSP
Sbjct: 1221 SSPGFSPTSPAYSPTSP 1237