[UP]
[1][TOP]
>UniRef100_B9IDF9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9IDF9_POPTR
Length = 1141
Score = 106 bits (265), Expect = 8e-22
Identities = 50/71 (70%), Positives = 60/71 (84%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ V++ F QVCR+CGLLGYYN +LK +C +CKNGD++S MKLPYACKLLIQELQS
Sbjct: 1071 RLMVSSDQFE-AQVCRACGLLGYYNQKLKAAMCTTCKNGDKVSTMKLPYACKLLIQELQS 1129
Query: 214 MNIVPRLKLAD 182
MNIVPRLKLA+
Sbjct: 1130 MNIVPRLKLAE 1140
[2][TOP]
>UniRef100_UPI00005DC295 NRPC2; DNA binding / DNA-directed RNA polymerase/ ribonucleoside
binding n=1 Tax=Arabidopsis thaliana RepID=UPI00005DC295
Length = 1161
Score = 105 bits (263), Expect = 1e-21
Identities = 49/65 (75%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Frame = -2
Query: 373 SFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPR 197
S PF QVCR+CGLLGYYNY+LK VC +CKNGD I+ MKLPYACKLL QELQSMN+VPR
Sbjct: 1096 SDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQELQSMNVVPR 1155
Query: 196 LKLAD 182
LKL +
Sbjct: 1156 LKLTE 1160
[3][TOP]
>UniRef100_B9SHS2 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9SHS2_RICCO
Length = 1139
Score = 105 bits (263), Expect = 1e-21
Identities = 50/65 (76%), Positives = 56/65 (86%), Gaps = 1/65 (1%)
Frame = -2
Query: 373 SFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPR 197
S PF QVCR CGLLGY+N +L+ G+C +CKNGD IS MKLPYACKLLIQELQSMNIVPR
Sbjct: 1074 SDPFEVQVCRVCGLLGYFNQKLRAGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPR 1133
Query: 196 LKLAD 182
LKLA+
Sbjct: 1134 LKLAE 1138
[4][TOP]
>UniRef100_UPI0001985A70 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001985A70
Length = 1142
Score = 104 bits (260), Expect = 3e-21
Identities = 48/65 (73%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Frame = -2
Query: 373 SFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPR 197
S PF QVCR CGLLGYYN++LK G+C +CKNGD IS MKLPYACKLL QELQ+MN+VPR
Sbjct: 1077 SDPFEVQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPR 1136
Query: 196 LKLAD 182
LKL +
Sbjct: 1137 LKLTE 1141
[5][TOP]
>UniRef100_A7QMF0 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7QMF0_VITVI
Length = 1146
Score = 104 bits (260), Expect = 3e-21
Identities = 48/65 (73%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Frame = -2
Query: 373 SFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPR 197
S PF QVCR CGLLGYYN++LK G+C +CKNGD IS MKLPYACKLL QELQ+MN+VPR
Sbjct: 1081 SDPFEVQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPR 1140
Query: 196 LKLAD 182
LKL +
Sbjct: 1141 LKLTE 1145
[6][TOP]
>UniRef100_C5Z6F6 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5Z6F6_SORBI
Length = 1137
Score = 95.5 bits (236), Expect = 2e-18
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = -2
Query: 358 QVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
QVCR CGLLGYYN++LKT C CKNG+ ++ M+LPYACKLL QEL +MN+VPRLKL +
Sbjct: 1078 QVCRKCGLLGYYNHKLKTSYCSMCKNGENMAKMRLPYACKLLFQELHAMNVVPRLKLTE 1136
[7][TOP]
>UniRef100_Q84R88 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q84R88_ORYSJ
Length = 1174
Score = 94.7 bits (234), Expect = 3e-18
Identities = 39/59 (66%), Positives = 49/59 (83%)
Frame = -2
Query: 358 QVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
QVCR CGLLGYYN++LK C CKNG+ ++ M++PYACKLL QELQ+MN+VPRLKL +
Sbjct: 1115 QVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMNVVPRLKLTE 1173
[8][TOP]
>UniRef100_Q10JZ3 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q10JZ3_ORYSJ
Length = 1155
Score = 94.7 bits (234), Expect = 3e-18
Identities = 39/59 (66%), Positives = 49/59 (83%)
Frame = -2
Query: 358 QVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
QVCR CGLLGYYN++LK C CKNG+ ++ M++PYACKLL QELQ+MN+VPRLKL +
Sbjct: 1096 QVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMNVVPRLKLTE 1154
[9][TOP]
>UniRef100_B9F8X6 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9F8X6_ORYSJ
Length = 1115
Score = 94.7 bits (234), Expect = 3e-18
Identities = 39/59 (66%), Positives = 49/59 (83%)
Frame = -2
Query: 358 QVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
QVCR CGLLGYYN++LK C CKNG+ ++ M++PYACKLL QELQ+MN+VPRLKL +
Sbjct: 1056 QVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMNVVPRLKLTE 1114
[10][TOP]
>UniRef100_B8AR02 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group
RepID=B8AR02_ORYSI
Length = 1117
Score = 94.7 bits (234), Expect = 3e-18
Identities = 39/59 (66%), Positives = 49/59 (83%)
Frame = -2
Query: 358 QVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
QVCR CGLLGYYN++LK C CKNG+ ++ M++PYACKLL QELQ+MN+VPRLKL +
Sbjct: 1058 QVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMNVVPRLKLTE 1116
[11][TOP]
>UniRef100_A9RNX6 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9RNX6_PHYPA
Length = 1135
Score = 92.8 bits (229), Expect = 1e-17
Identities = 42/71 (59%), Positives = 56/71 (78%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ F QVC CG++GYY+++LK +C +CK+GD I+ MKLPYACKLL QELQS
Sbjct: 1065 RLMISSDQFQI-QVCTKCGMIGYYHHKLKICLCSTCKSGDNIATMKLPYACKLLFQELQS 1123
Query: 214 MNIVPRLKLAD 182
MNIVPRL LA+
Sbjct: 1124 MNIVPRLTLAE 1134
[12][TOP]
>UniRef100_Q9FKF1 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana
RepID=Q9FKF1_ARATH
Length = 1194
Score = 83.6 bits (205), Expect = 7e-15
Identities = 40/64 (62%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Frame = -2
Query: 373 SFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPR 197
S PF QVCR+CGLLGYYNY+LK VC +CKNGD I+ MKLPYACKLL Q ++++ + +
Sbjct: 1106 SDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ-VKTIGLFFK 1164
Query: 196 LKLA 185
LKL+
Sbjct: 1165 LKLS 1168
[13][TOP]
>UniRef100_C1FIF0 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1FIF0_9CHLO
Length = 1159
Score = 78.2 bits (191), Expect = 3e-13
Identities = 37/71 (52%), Positives = 49/71 (69%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ F QVC +CGLLGY ++ +C C +G +S +KLPYACKLL QELQS
Sbjct: 1089 RLMISSDQFE-AQVCTNCGLLGYKHHGTGRNLCQQCADGGTVSALKLPYACKLLFQELQS 1147
Query: 214 MNIVPRLKLAD 182
MNI PRL L+D
Sbjct: 1148 MNICPRLTLSD 1158
[14][TOP]
>UniRef100_Q4S7G7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon nigroviridis
RepID=Q4S7G7_TETNG
Length = 1171
Score = 74.7 bits (182), Expect = 3e-12
Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTG----VCPSCKNGDQISNMKLPYACKLLIQ 227
R+ +++ +F VC CGLLGY +++K C CK+ Q+S++++PYACKLL Q
Sbjct: 1095 RLMISSDAFE-VDVCGQCGLLGYSGWQVKLSHLDLECHYCKSSCQVSSLRIPYACKLLFQ 1153
Query: 226 ELQSMNIVPRLKLA 185
ELQSMNI+PRLKL+
Sbjct: 1154 ELQSMNIIPRLKLS 1167
[15][TOP]
>UniRef100_A4RS40 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RS40_OSTLU
Length = 1146
Score = 74.7 bits (182), Expect = 3e-12
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ F QVC CGLLG+ ++ + C CK +++ +KLPYACKLL QELQS
Sbjct: 1076 RLMISSDQFE-AQVCTKCGLLGFQHHITRRNACTLCKTEAEVATLKLPYACKLLFQELQS 1134
Query: 214 MNIVPRLKLAD 182
MNI PRL L +
Sbjct: 1135 MNIAPRLSLTE 1145
[16][TOP]
>UniRef100_UPI00017B31AA UPI00017B31AA related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B31AA
Length = 1153
Score = 73.6 bits (179), Expect = 7e-12
Identities = 36/70 (51%), Positives = 50/70 (71%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ Q+S++++PYACKLL QELQS
Sbjct: 1091 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCQVSSLRIPYACKLLFQELQS 1143
Query: 214 MNIVPRLKLA 185
MNI+PRLKL+
Sbjct: 1144 MNIIPRLKLS 1153
[17][TOP]
>UniRef100_UPI00017B31A9 UPI00017B31A9 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B31A9
Length = 1132
Score = 73.6 bits (179), Expect = 7e-12
Identities = 36/70 (51%), Positives = 50/70 (71%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ Q+S++++PYACKLL QELQS
Sbjct: 1066 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCQVSSLRIPYACKLLFQELQS 1118
Query: 214 MNIVPRLKLA 185
MNI+PRLKL+
Sbjct: 1119 MNIIPRLKLS 1128
[18][TOP]
>UniRef100_UPI000194E18E PREDICTED: hypothetical protein n=1 Tax=Taeniopygia guttata
RepID=UPI000194E18E
Length = 1280
Score = 72.8 bits (177), Expect = 1e-11
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 1214 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCHVSSLRIPYACKLLFQELQS 1266
Query: 214 MNIVPRLKLA 185
MNI+PRLKLA
Sbjct: 1267 MNIIPRLKLA 1276
[19][TOP]
>UniRef100_UPI0000E7F911 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide
B n=1 Tax=Gallus gallus RepID=UPI0000E7F911
Length = 1126
Score = 72.8 bits (177), Expect = 1e-11
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 1060 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCHVSSLRIPYACKLLFQELQS 1112
Query: 214 MNIVPRLKLA 185
MNI+PRLKLA
Sbjct: 1113 MNIIPRLKLA 1122
[20][TOP]
>UniRef100_UPI0000503D79 polymerase (RNA) III (DNA directed) polypeptide B n=2 Tax=Rattus
norvegicus RepID=UPI0000503D79
Length = 1133
Score = 72.8 bits (177), Expect = 1e-11
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 1067 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCHVSSLRIPYACKLLFQELQS 1119
Query: 214 MNIVPRLKLA 185
MNI+PRLKLA
Sbjct: 1120 MNIIPRLKLA 1129
[21][TOP]
>UniRef100_UPI00006A103B DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA
polymerase III subunit C2) (DNA-directed RNA polymerase
III subunit B) (DNA-directed RNA polymerase III 127.6 kDa
polypeptide) (C128). n=1 Tax=Xenopus (Silurana)
tropicalis RepID=UPI00006A103B
Length = 1122
Score = 72.8 bits (177), Expect = 1e-11
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 1056 RLMISSDAFE-VDVCGKCGLLGY------SGWCHFCKSSCHVSSLRIPYACKLLFQELQS 1108
Query: 214 MNIVPRLKLA 185
MNI+PRLKLA
Sbjct: 1109 MNIIPRLKLA 1118
[22][TOP]
>UniRef100_UPI00004DA04E DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA
polymerase III subunit C2) (DNA-directed RNA polymerase
III subunit B) (DNA-directed RNA polymerase III 127.6 kDa
polypeptide) (C128). n=1 Tax=Xenopus (Silurana)
tropicalis RepID=UPI00004DA04E
Length = 1136
Score = 72.8 bits (177), Expect = 1e-11
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 1070 RLMISSDAFE-VDVCGKCGLLGY------SGWCHFCKSSCHVSSLRIPYACKLLFQELQS 1122
Query: 214 MNIVPRLKLA 185
MNI+PRLKLA
Sbjct: 1123 MNIIPRLKLA 1132
[23][TOP]
>UniRef100_UPI0000ECD29F DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA
polymerase III subunit C2) (DNA-directed RNA polymerase
III subunit B) (DNA-directed RNA polymerase III 127.6 kDa
polypeptide) (C128). n=1 Tax=Gallus gallus
RepID=UPI0000ECD29F
Length = 1132
Score = 72.8 bits (177), Expect = 1e-11
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 1066 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCHVSSLRIPYACKLLFQELQS 1118
Query: 214 MNIVPRLKLA 185
MNI+PRLKLA
Sbjct: 1119 MNIIPRLKLA 1128
[24][TOP]
>UniRef100_C0PUS9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Salmo salar
RepID=C0PUS9_SALSA
Length = 814
Score = 72.8 bits (177), Expect = 1e-11
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 748 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCHVSSLRIPYACKLLFQELQS 800
Query: 214 MNIVPRLKLA 185
MNI+PRLKLA
Sbjct: 801 MNIIPRLKLA 810
[25][TOP]
>UniRef100_B2GUR3 DNA-directed RNA polymerase n=1 Tax=Xenopus (Silurana) tropicalis
RepID=B2GUR3_XENTR
Length = 1134
Score = 72.8 bits (177), Expect = 1e-11
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 1068 RLMISSDAFE-VDVCGKCGLLGY------SGWCHFCKSSCHVSSLRIPYACKLLFQELQS 1120
Query: 214 MNIVPRLKLA 185
MNI+PRLKLA
Sbjct: 1121 MNIIPRLKLA 1130
[26][TOP]
>UniRef100_A2BG99 DNA-directed RNA polymerase n=1 Tax=Danio rerio RepID=A2BG99_DANRE
Length = 1130
Score = 72.8 bits (177), Expect = 1e-11
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 1064 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCHVSSLRIPYACKLLFQELQS 1116
Query: 214 MNIVPRLKLA 185
MNI+PRLKLA
Sbjct: 1117 MNIIPRLKLA 1126
[27][TOP]
>UniRef100_Q9CSL3 Putative uncharacterized protein (Fragment) n=1 Tax=Mus musculus
RepID=Q9CSL3_MOUSE
Length = 112
Score = 72.8 bits (177), Expect = 1e-11
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 46 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCHVSSLRIPYACKLLFQELQS 98
Query: 214 MNIVPRLKLA 185
MNI+PRLKLA
Sbjct: 99 MNIIPRLKLA 108
[28][TOP]
>UniRef100_P59470 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Mus musculus
RepID=RPC2_MOUSE
Length = 1133
Score = 72.8 bits (177), Expect = 1e-11
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 1067 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCHVSSLRIPYACKLLFQELQS 1119
Query: 214 MNIVPRLKLA 185
MNI+PRLKLA
Sbjct: 1120 MNIIPRLKLA 1129
[29][TOP]
>UniRef100_C1N4K3 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N4K3_9CHLO
Length = 1197
Score = 72.0 bits (175), Expect = 2e-11
Identities = 36/71 (50%), Positives = 47/71 (66%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ F QVC CGLL Y ++ C C++ D +S +KLPYACKLL QELQS
Sbjct: 1128 RLMISSDQFE-AQVCNKCGLLAYRHHGTGKDACAQCEDAD-VSALKLPYACKLLFQELQS 1185
Query: 214 MNIVPRLKLAD 182
MNI PRL L+D
Sbjct: 1186 MNICPRLTLSD 1196
[30][TOP]
>UniRef100_B8BQM2 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8BQM2_THAPS
Length = 1108
Score = 72.0 bits (175), Expect = 2e-11
Identities = 31/58 (53%), Positives = 45/58 (77%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC +CGLL Y N+ C C++G+++S+++LPYACKLL QELQ+MN++PRL+L D
Sbjct: 1056 VCMTCGLLQYQNW------CQYCRSGEKVSDIRLPYACKLLFQELQAMNVLPRLRLKD 1107
[31][TOP]
>UniRef100_B6AC47 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AC47_9CRYT
Length = 1219
Score = 72.0 bits (175), Expect = 2e-11
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -2
Query: 361 TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLK 191
T VC CGL GY NY C C+N D IS ++LPYACKLL QELQ+MN+ PR+K
Sbjct: 1167 TYVCNKCGLFGYNNY------CHYCRNSDDISIIRLPYACKLLFQELQAMNVCPRIK 1217
[32][TOP]
>UniRef100_UPI0001560749 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
(RNA polymerase III subunit C2) (DNA-directed RNA
polymerase III subunit B) (DNA-directed RNA polymerase
III 127.6 kDa polypeptide) (C128) n=1 Tax=Equus caballus
RepID=UPI0001560749
Length = 1133
Score = 71.6 bits (174), Expect = 3e-11
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 1067 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCHVSSLRIPYACKLLFQELQS 1119
Query: 214 MNIVPRLKLA 185
MNI+PRLKL+
Sbjct: 1120 MNIIPRLKLS 1129
[33][TOP]
>UniRef100_UPI000155CB1A PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide
B n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155CB1A
Length = 1113
Score = 71.6 bits (174), Expect = 3e-11
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 1047 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCHVSSLRIPYACKLLFQELQS 1099
Query: 214 MNIVPRLKLA 185
MNI+PRLKL+
Sbjct: 1100 MNIIPRLKLS 1109
[34][TOP]
>UniRef100_UPI0000E23379 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide B isoform
2 n=1 Tax=Pan troglodytes RepID=UPI0000E23379
Length = 1133
Score = 71.6 bits (174), Expect = 3e-11
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 1067 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCHVSSLRIPYACKLLFQELQS 1119
Query: 214 MNIVPRLKLA 185
MNI+PRLKL+
Sbjct: 1120 MNIIPRLKLS 1129
[35][TOP]
>UniRef100_UPI00005EAC23 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide
B n=1 Tax=Monodelphis domestica RepID=UPI00005EAC23
Length = 1133
Score = 71.6 bits (174), Expect = 3e-11
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 1067 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCHVSSLRIPYACKLLFQELQS 1119
Query: 214 MNIVPRLKLA 185
MNI+PRLKL+
Sbjct: 1120 MNIIPRLKLS 1129
[36][TOP]
>UniRef100_UPI00016E4F58 UPI00016E4F58 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E4F58
Length = 1118
Score = 71.6 bits (174), Expect = 3e-11
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 1052 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCHVSSLRIPYACKLLFQELQS 1104
Query: 214 MNIVPRLKLA 185
MNI+PRLKL+
Sbjct: 1105 MNIIPRLKLS 1114
[37][TOP]
>UniRef100_UPI00016E4F57 UPI00016E4F57 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E4F57
Length = 1132
Score = 71.6 bits (174), Expect = 3e-11
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 1066 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCHVSSLRIPYACKLLFQELQS 1118
Query: 214 MNIVPRLKLA 185
MNI+PRLKL+
Sbjct: 1119 MNIIPRLKLS 1128
[38][TOP]
>UniRef100_UPI00005A223E PREDICTED: similar to DNA-directed RNA polymerase III subunit 127.6
kDa polypeptide (RNA polymerase III subunit 2) (RPC2) n=1
Tax=Canis lupus familiaris RepID=UPI00005A223E
Length = 1133
Score = 71.6 bits (174), Expect = 3e-11
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 1067 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCHVSSLRIPYACKLLFQELQS 1119
Query: 214 MNIVPRLKLA 185
MNI+PRLKL+
Sbjct: 1120 MNIIPRLKLS 1129
[39][TOP]
>UniRef100_UPI000179EFE0 UPI000179EFE0 related cluster n=1 Tax=Bos taurus
RepID=UPI000179EFE0
Length = 796
Score = 71.6 bits (174), Expect = 3e-11
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 730 RLMISSDAFE-VDVCGQCGLLGY------SGWCHFCKSSCHVSSLRIPYACKLLFQELQS 782
Query: 214 MNIVPRLKLA 185
MNI+PRLKL+
Sbjct: 783 MNIIPRLKLS 792
[40][TOP]
>UniRef100_UPI0000F339C2 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
(RNA polymerase III subunit C2) (DNA-directed RNA
polymerase III subunit B) (DNA-directed RNA polymerase
III 127.6 kDa polypeptide) (C128) n=1 Tax=Bos taurus
RepID=UPI0000F339C2
Length = 1133
Score = 71.6 bits (174), Expect = 3e-11
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 1067 RLMISSDAFE-VDVCGQCGLLGY------SGWCHFCKSSCHVSSLRIPYACKLLFQELQS 1119
Query: 214 MNIVPRLKLA 185
MNI+PRLKL+
Sbjct: 1120 MNIIPRLKLS 1129
[41][TOP]
>UniRef100_Q5NVB0 Putative uncharacterized protein DKFZp469K1717 n=1 Tax=Pongo abelii
RepID=Q5NVB0_PONAB
Length = 1116
Score = 71.6 bits (174), Expect = 3e-11
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 1050 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCHVSSLRIPYACKLLFQELQS 1102
Query: 214 MNIVPRLKLA 185
MNI+PRLKL+
Sbjct: 1103 MNIIPRLKLS 1112
[42][TOP]
>UniRef100_C3YYC3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3YYC3_BRAFL
Length = 1137
Score = 71.6 bits (174), Expect = 3e-11
Identities = 36/69 (52%), Positives = 46/69 (66%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ F VC CGLLGY +G C CK+ +S++K+PYACKLL QELQS
Sbjct: 1071 RLMISSDQFE-VDVCGECGLLGY------SGWCQYCKSSRNVSSLKMPYACKLLFQELQS 1123
Query: 214 MNIVPRLKL 188
MNI PRLKL
Sbjct: 1124 MNIAPRLKL 1132
[43][TOP]
>UniRef100_Q7Z3R8 DNA-directed RNA polymerase n=2 Tax=Homininae RepID=Q7Z3R8_HUMAN
Length = 1133
Score = 71.6 bits (174), Expect = 3e-11
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 1067 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCHVSSLRIPYACKLLFQELQS 1119
Query: 214 MNIVPRLKLA 185
MNI+PRLKL+
Sbjct: 1120 MNIIPRLKLS 1129
[44][TOP]
>UniRef100_B3KV73 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KV73_HUMAN
Length = 1075
Score = 71.6 bits (174), Expect = 3e-11
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 1009 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCHVSSLRIPYACKLLFQELQS 1061
Query: 214 MNIVPRLKLA 185
MNI+PRLKL+
Sbjct: 1062 MNIIPRLKLS 1071
[45][TOP]
>UniRef100_B3KRQ8 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KRQ8_HUMAN
Length = 838
Score = 71.6 bits (174), Expect = 3e-11
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 772 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCHVSSLRIPYACKLLFQELQS 824
Query: 214 MNIVPRLKLA 185
MNI+PRLKL+
Sbjct: 825 MNIIPRLKLS 834
[46][TOP]
>UniRef100_B3KQY9 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KQY9_HUMAN
Length = 523
Score = 71.6 bits (174), Expect = 3e-11
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 457 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCHVSSLRIPYACKLLFQELQS 509
Query: 214 MNIVPRLKLA 185
MNI+PRLKL+
Sbjct: 510 MNIIPRLKLS 519
[47][TOP]
>UniRef100_Q5KC33 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q5KC33_CRYNE
Length = 1129
Score = 71.6 bits (174), Expect = 3e-11
Identities = 35/71 (49%), Positives = 48/71 (67%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F TQVC SCG+LGY N+ CP CK+G + + +PYA KLLIQEL
Sbjct: 1064 RLMISSDAFE-TQVCESCGMLGYNNW------CPKCKSGKGVVGLTIPYAAKLLIQELMG 1116
Query: 214 MNIVPRLKLAD 182
MNI+P+L L D
Sbjct: 1117 MNIMPKLCLED 1127
[48][TOP]
>UniRef100_Q9NW08 DNA-directed RNA polymerase III subunit RPC2 n=2 Tax=Homo sapiens
RepID=RPC2_HUMAN
Length = 1133
Score = 71.6 bits (174), Expect = 3e-11
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGLLGY +G C CK+ +S++++PYACKLL QELQS
Sbjct: 1067 RLMISSDAFE-VDVCGQCGLLGY------SGWCHYCKSSCHVSSLRIPYACKLLFQELQS 1119
Query: 214 MNIVPRLKLA 185
MNI+PRLKL+
Sbjct: 1120 MNIIPRLKLS 1129
[49][TOP]
>UniRef100_Q54IZ9 Ddi rpc2 intein n=1 Tax=Dictyostelium discoideum RepID=RPC2_DICDI
Length = 1608
Score = 70.9 bits (172), Expect = 5e-11
Identities = 33/57 (57%), Positives = 40/57 (70%)
Frame = -2
Query: 352 CRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
C++CG LGY Y C CK+ IS +++PYACKLL QELQ+MNIVPRLKL D
Sbjct: 1557 CKNCGFLGYEGY------CQYCKSSVDISTIQIPYACKLLFQELQAMNIVPRLKLVD 1607
[50][TOP]
>UniRef100_B7FVD4 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7FVD4_PHATR
Length = 1211
Score = 69.7 bits (169), Expect = 1e-10
Identities = 31/58 (53%), Positives = 44/58 (75%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC +CGLL Y G C C++G+++++++LPYACKLL QELQSMN++PRL+L D
Sbjct: 1159 VCLTCGLLQY------EGWCQYCRSGEKVADIRLPYACKLLFQELQSMNVLPRLRLQD 1210
[51][TOP]
>UniRef100_Q5D921 SJCHGC09486 protein (Fragment) n=1 Tax=Schistosoma japonicum
RepID=Q5D921_SCHJA
Length = 204
Score = 69.7 bits (169), Expect = 1e-10
Identities = 33/60 (55%), Positives = 40/60 (66%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLADPL 176
VC CGL+ + KT C SCKN QIS +KLPYACKLL QEL SM+I PR+ + P+
Sbjct: 143 VCNLCGLIAIAHQRNKTYECRSCKNTTQISLVKLPYACKLLFQELMSMSIAPRMMINSPM 202
[52][TOP]
>UniRef100_C4Q1D7 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
RepID=C4Q1D7_SCHMA
Length = 1304
Score = 68.9 bits (167), Expect = 2e-10
Identities = 33/59 (55%), Positives = 39/59 (66%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLADP 179
VC CGL+ + KT C SCKN QIS +KLPYACKLL QEL SM+I PR+ + P
Sbjct: 1243 VCNLCGLIAIAHQRNKTYECRSCKNTTQISLVKLPYACKLLFQELMSMSIAPRMMINSP 1301
[53][TOP]
>UniRef100_UPI0001926137 PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata
RepID=UPI0001926137
Length = 1426
Score = 68.6 bits (166), Expect = 2e-10
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLADPL 176
VC CGL+ N T C SCKN Q+S +++PYACKLL QEL SM+I PR+ +A L
Sbjct: 1123 VCNLCGLIAIANLRNNTFECRSCKNKTQVSQIRIPYACKLLFQELMSMSIAPRMMIASEL 1182
[54][TOP]
>UniRef100_UPI000180BF5A PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide
B n=1 Tax=Ciona intestinalis RepID=UPI000180BF5A
Length = 1141
Score = 68.6 bits (166), Expect = 2e-10
Identities = 34/69 (49%), Positives = 44/69 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ F VC CGLLGY G C CK+ ++ +K+PYACKLL QEL S
Sbjct: 1075 RLMISSDQFE-VDVCGKCGLLGY------DGWCQFCKSSKNVATLKIPYACKLLFQELTS 1127
Query: 214 MNIVPRLKL 188
MNI+PRLKL
Sbjct: 1128 MNIIPRLKL 1136
[55][TOP]
>UniRef100_UPI0000E4965C PREDICTED: similar to RNA polymerase III subunit RPC2, partial n=1
Tax=Strongylocentrotus purpuratus RepID=UPI0000E4965C
Length = 313
Score = 68.2 bits (165), Expect = 3e-10
Identities = 33/69 (47%), Positives = 46/69 (66%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ F VC CGL+G+ +G CP C IS++++PYACKLL QELQS
Sbjct: 247 RLMISSDQFQ-VDVCGDCGLIGH------SGWCPYCHCSQNISSLRIPYACKLLFQELQS 299
Query: 214 MNIVPRLKL 188
MNI+PRL+L
Sbjct: 300 MNIIPRLRL 308
[56][TOP]
>UniRef100_UPI0000E487B4 PREDICTED: similar to Polymerase (RNA) III (DNA directed)
polypeptide B n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E487B4
Length = 830
Score = 68.2 bits (165), Expect = 3e-10
Identities = 33/69 (47%), Positives = 46/69 (66%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ F VC CGL+G+ +G CP C IS++++PYACKLL QELQS
Sbjct: 764 RLMISSDQFQ-VDVCGDCGLIGH------SGWCPYCHCSQNISSLRIPYACKLLFQELQS 816
Query: 214 MNIVPRLKL 188
MNI+PRL+L
Sbjct: 817 MNIIPRLRL 825
[57][TOP]
>UniRef100_Q01FH9 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri
RepID=Q01FH9_OSTTA
Length = 2569
Score = 68.2 bits (165), Expect = 3e-10
Identities = 32/71 (45%), Positives = 45/71 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ F QVC CGLLG+ ++ C CK +++ +KLPYA KLL QELQS
Sbjct: 1106 RLMISSDQFE-AQVCTKCGLLGFQHHITGKNACTLCKTEAEVATLKLPYAAKLLFQELQS 1164
Query: 214 MNIVPRLKLAD 182
NI PR+ LA+
Sbjct: 1165 CNIAPRINLAE 1175
[58][TOP]
>UniRef100_UPI00015B53C8 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide
B n=1 Tax=Nasonia vitripennis RepID=UPI00015B53C8
Length = 1127
Score = 67.8 bits (164), Expect = 4e-10
Identities = 33/61 (54%), Positives = 40/61 (65%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLADPL 176
VC CGL+ Y TG C SC++ +S + +PYACKLL QELQSMNIVPRL L +
Sbjct: 1073 VCNKCGLMAY------TGYCHSCRSSACVSTITMPYACKLLFQELQSMNIVPRLTLKNYC 1126
Query: 175 D 173
D
Sbjct: 1127 D 1127
[59][TOP]
>UniRef100_Q5CPZ8 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium parvum Iowa II
RepID=Q5CPZ8_CRYPV
Length = 1287
Score = 67.8 bits (164), Expect = 4e-10
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = -2
Query: 361 TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLK 191
T VC CGL GY NY C CK+ +S ++LPYACKLL QELQ+MN+ PR++
Sbjct: 1233 TNVCNQCGLFGYNNY------CHYCKSSQDVSIIRLPYACKLLFQELQAMNVCPRIR 1283
[60][TOP]
>UniRef100_A8WJV6 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae AF16
RepID=A8WJV6_CAEBR
Length = 1160
Score = 67.8 bits (164), Expect = 4e-10
Identities = 32/62 (51%), Positives = 40/62 (64%)
Frame = -2
Query: 370 FPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLK 191
F VC CG++G G C C++ ++N+K+PYACKLL QELQSMNIVPRL
Sbjct: 1101 FQCVDVCTGCGVIG------SKGWCQKCRSSKSMANIKIPYACKLLFQELQSMNIVPRLD 1154
Query: 190 LA 185
LA
Sbjct: 1155 LA 1156
[61][TOP]
>UniRef100_C4R793 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4R793_PICPG
Length = 1158
Score = 67.8 bits (164), Expect = 4e-10
Identities = 34/71 (47%), Positives = 46/71 (64%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC +CGL+GY G CP+CK+ + I M +PYA KLL QEL S
Sbjct: 1093 RLMISSDAFE-VDVCNTCGLMGY------NGWCPTCKSSEFIIKMTIPYAAKLLFQELVS 1145
Query: 214 MNIVPRLKLAD 182
MNI PRL+L D
Sbjct: 1146 MNIAPRLELGD 1156
[62][TOP]
>UniRef100_UPI000051A146 PREDICTED: similar to DNA-directed RNA polymerase III subunit 127.6
kDa polypeptide (RNA polymerase III subunit 2) (RPC2)
isoform 1 n=1 Tax=Apis mellifera RepID=UPI000051A146
Length = 1134
Score = 67.4 bits (163), Expect = 5e-10
Identities = 34/74 (45%), Positives = 47/74 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGL+ Y +G C SC++ +S + +PYACKLL QELQS
Sbjct: 1068 RLMISSDAFDI-DVCNKCGLMAY------SGWCHSCRSSSCVSTISMPYACKLLFQELQS 1120
Query: 214 MNIVPRLKLADPLD 173
MNIVPRL L + D
Sbjct: 1121 MNIVPRLTLKNYCD 1134
[63][TOP]
>UniRef100_Q27492 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis elegans
RepID=Q27492_CAEEL
Length = 1154
Score = 67.4 bits (163), Expect = 5e-10
Identities = 34/70 (48%), Positives = 45/70 (64%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ V++ F VC CG++G G C C++ ++N+K+PYACKLL QELQS
Sbjct: 1088 RLMVSSDEFK-VDVCTGCGVIG------SKGWCQKCRSSKSMANIKIPYACKLLFQELQS 1140
Query: 214 MNIVPRLKLA 185
MNIVPRL LA
Sbjct: 1141 MNIVPRLDLA 1150
[64][TOP]
>UniRef100_B6VBN7 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis brenneri
RepID=B6VBN7_CAEBE
Length = 1152
Score = 67.4 bits (163), Expect = 5e-10
Identities = 34/70 (48%), Positives = 45/70 (64%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ V++ F VC CG++G G C C++ ++N+K+PYACKLL QELQS
Sbjct: 1086 RLMVSSDEFK-VDVCTGCGVIG------SKGWCQKCRSSKSMANIKIPYACKLLFQELQS 1138
Query: 214 MNIVPRLKLA 185
MNIVPRL LA
Sbjct: 1139 MNIVPRLDLA 1148
[65][TOP]
>UniRef100_Q75B52 DNA-directed RNA polymerase n=1 Tax=Eremothecium gossypii
RepID=Q75B52_ASHGO
Length = 1141
Score = 67.4 bits (163), Expect = 5e-10
Identities = 33/58 (56%), Positives = 38/58 (65%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CGL+GY +G C SCK+ + I M +PYA KLL QEL SMNI PRLKL D
Sbjct: 1086 VCNKCGLMGY------SGWCTSCKSAEHIIKMTIPYAAKLLFQELLSMNIAPRLKLED 1137
[66][TOP]
>UniRef100_C5DEU3 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DEU3_LACTC
Length = 1144
Score = 67.4 bits (163), Expect = 5e-10
Identities = 34/71 (47%), Positives = 44/71 (61%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGL+GY +G C SCK + + M +PYA KLL QEL S
Sbjct: 1077 RLMISSDAFE-VDVCNKCGLMGY------SGWCTSCKGAENVIKMTIPYAAKLLFQELLS 1129
Query: 214 MNIVPRLKLAD 182
MNI PRLKL D
Sbjct: 1130 MNIAPRLKLED 1140
[67][TOP]
>UniRef100_B9Q403 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii VEG
RepID=B9Q403_TOXGO
Length = 1324
Score = 67.0 bits (162), Expect = 7e-10
Identities = 29/58 (50%), Positives = 40/58 (68%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC +CGL+GY G CP CK+G ++ +++PYACKLL QEL SMN+ PRL + +
Sbjct: 1272 VCSTCGLMGY------EGWCPYCKSGKHVAPIRMPYACKLLFQELMSMNVCPRLHIKE 1323
[68][TOP]
>UniRef100_B9PFT5 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii GT1
RepID=B9PFT5_TOXGO
Length = 1328
Score = 67.0 bits (162), Expect = 7e-10
Identities = 29/58 (50%), Positives = 40/58 (68%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC +CGL+GY G CP CK+G ++ +++PYACKLL QEL SMN+ PRL + +
Sbjct: 1276 VCSTCGLMGY------EGWCPYCKSGKHVAPIRMPYACKLLFQELMSMNVCPRLHIKE 1327
[69][TOP]
>UniRef100_B6KDI3 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49
RepID=B6KDI3_TOXGO
Length = 1332
Score = 67.0 bits (162), Expect = 7e-10
Identities = 29/58 (50%), Positives = 40/58 (68%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC +CGL+GY G CP CK+G ++ +++PYACKLL QEL SMN+ PRL + +
Sbjct: 1280 VCSTCGLMGY------EGWCPYCKSGKHVAPIRMPYACKLLFQELMSMNVCPRLHIKE 1331
[70][TOP]
>UniRef100_B4R0H5 DNA-directed RNA polymerase n=1 Tax=Drosophila simulans
RepID=B4R0H5_DROSI
Length = 1176
Score = 67.0 bits (162), Expect = 7e-10
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ +C CGL+ N T C SCKN QIS ++LPYA KLL QEL
Sbjct: 1105 LRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECKSCKNKTQISQVRLPYAAKLLFQEL 1164
Query: 220 QSMNIVPRL 194
SMNI PRL
Sbjct: 1165 MSMNIAPRL 1173
[71][TOP]
>UniRef100_B0WKE9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
RepID=B0WKE9_CULQU
Length = 1176
Score = 66.6 bits (161), Expect = 9e-10
Identities = 35/69 (50%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPFT-QVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CGL+ N T C CKN QIS +KLPYA KLL QEL
Sbjct: 1105 LRERLFEVSDPYRIHVCNFCGLIAIANMRNNTFECKGCKNKTQISQVKLPYAAKLLFQEL 1164
Query: 220 QSMNIVPRL 194
SMNI PRL
Sbjct: 1165 MSMNIAPRL 1173
[72][TOP]
>UniRef100_B9WLY1 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9WLY1_CANDC
Length = 1157
Score = 66.6 bits (161), Expect = 9e-10
Identities = 32/71 (45%), Positives = 45/71 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGL+GY N+ C +CK+ + + M +PYA KLL QEL S
Sbjct: 1092 RLMISSDAFE-VDVCNKCGLMGYNNW------CTTCKSSENVIKMTIPYAAKLLFQELLS 1144
Query: 214 MNIVPRLKLAD 182
MNI PRL+L D
Sbjct: 1145 MNIAPRLRLGD 1155
[73][TOP]
>UniRef100_C5KAB2 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5KAB2_9ALVE
Length = 1140
Score = 66.2 bits (160), Expect = 1e-09
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKL 188
VCR CGLL Y N G C C + I ++++PYACKLL QELQ+MN+ PRLK+
Sbjct: 1087 VCRRCGLLSYQN-----GTCKLCGTSENIVDIRMPYACKLLFQELQAMNVCPRLKV 1137
[74][TOP]
>UniRef100_C5K7V0 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5K7V0_9ALVE
Length = 1159
Score = 66.2 bits (160), Expect = 1e-09
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKL 188
VCR CGLL Y N G C C + I ++++PYACKLL QELQ+MN+ PRLK+
Sbjct: 1106 VCRRCGLLSYQN-----GTCKLCGTSENIVDIRMPYACKLLFQELQAMNVCPRLKV 1156
[75][TOP]
>UniRef100_C5DY85 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DY85_ZYGRC
Length = 1143
Score = 66.2 bits (160), Expect = 1e-09
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = -2
Query: 358 QVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
+VC CGL+GY +G C +C++ + I+ M +PYA KLL QEL SMNI PRL+L D
Sbjct: 1087 EVCEKCGLMGY------SGWCTTCRSAEHINKMSIPYAAKLLFQELLSMNIAPRLRLED 1139
[76][TOP]
>UniRef100_C4Y486 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC 42720
RepID=C4Y486_CLAL4
Length = 1159
Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/71 (45%), Positives = 46/71 (64%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC +CGL+GY ++ C +CK+ + + M +PYA KLL QEL S
Sbjct: 1094 RLMISSDAFE-VDVCNNCGLMGYSSW------CSTCKSSEHVIKMTIPYAAKLLFQELLS 1146
Query: 214 MNIVPRLKLAD 182
MNI PRLKL D
Sbjct: 1147 MNIAPRLKLGD 1157
[77][TOP]
>UniRef100_UPI00017937B7 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide n=1 Tax=Acyrthosiphon pisum
RepID=UPI00017937B7
Length = 1101
Score = 65.9 bits (159), Expect = 1e-09
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
+C CGL+ N T C CKN QIS +KLPYA KLL QEL SMNI PRL + +
Sbjct: 1044 ICNFCGLIAIANLRNNTFECKGCKNKTQISQVKLPYAAKLLFQELMSMNIAPRLMVTN 1101
[78][TOP]
>UniRef100_UPI00015B44D8 PREDICTED: similar to ENSANGP00000011389 n=1 Tax=Nasonia vitripennis
RepID=UPI00015B44D8
Length = 1175
Score = 65.9 bits (159), Expect = 1e-09
Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = -2
Query: 397 IRIKVANYSFPFT-QVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CGL+ N T C CKN QIS ++LPYA KLL QEL
Sbjct: 1104 LRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKGCKNKTQISQVRLPYAAKLLFQEL 1163
Query: 220 QSMNIVPRLKL 188
SMNI PRL +
Sbjct: 1164 MSMNIAPRLMI 1174
[79][TOP]
>UniRef100_UPI000151B156 DNA-directed RNA polymerase III 130 kDa polypeptide n=1 Tax=Pichia
guilliermondii ATCC 6260 RepID=UPI000151B156
Length = 1156
Score = 65.9 bits (159), Expect = 1e-09
Identities = 31/58 (53%), Positives = 39/58 (67%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC +CGL+GY ++ C SCK+ + + M +PYA KLL QEL SMNI PRLKL D
Sbjct: 1103 VCNNCGLMGYNSW------CTSCKSSENVIKMTIPYAAKLLFQELLSMNIAPRLKLDD 1154
[80][TOP]
>UniRef100_UPI00003BE866 hypothetical protein DEHA0G24574g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BE866
Length = 1165
Score = 65.9 bits (159), Expect = 1e-09
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
+C CGL+GY ++ C SCK+ + I M +PYA KLL QEL SMNI PRLKL D
Sbjct: 1112 ICNQCGLMGYNSW------CTSCKSSEYIIKMTIPYAAKLLFQELLSMNIAPRLKLGD 1163
[81][TOP]
>UniRef100_B7QNH8 DNA-directed RNA polymerase n=1 Tax=Ixodes scapularis
RepID=B7QNH8_IXOSC
Length = 1142
Score = 65.9 bits (159), Expect = 1e-09
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ +C CGLL N T C C+N QIS ++LPYACKLL QEL
Sbjct: 1071 LRERLFEVSDPYRAHICNLCGLLAIANLRNNTFECKGCRNKTQISQIRLPYACKLLFQEL 1130
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1131 MSMSIAPRM 1139
[82][TOP]
>UniRef100_B4N9I3 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4N9I3_DROWI
Length = 1176
Score = 65.9 bits (159), Expect = 1e-09
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ +C CGL+ N T C CKN QIS ++LPYA KLL QEL
Sbjct: 1105 LRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECKGCKNKTQISQVRLPYAAKLLFQEL 1164
Query: 220 QSMNIVPRLKLA 185
SMNI PRL ++
Sbjct: 1165 MSMNIAPRLMVS 1176
[83][TOP]
>UniRef100_B4M040 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4M040_DROVI
Length = 1176
Score = 65.9 bits (159), Expect = 1e-09
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ +C CGL+ N T C CKN QIS ++LPYA KLL QEL
Sbjct: 1105 LRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECKGCKNKTQISQVRLPYAAKLLFQEL 1164
Query: 220 QSMNIVPRLKLA 185
SMNI PRL ++
Sbjct: 1165 MSMNIAPRLMVS 1176
[84][TOP]
>UniRef100_B4KDW5 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4KDW5_DROMO
Length = 1176
Score = 65.9 bits (159), Expect = 1e-09
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ +C CGL+ N T C CKN QIS ++LPYA KLL QEL
Sbjct: 1105 LRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECKGCKNKTQISQVRLPYAAKLLFQEL 1164
Query: 220 QSMNIVPRLKLA 185
SMNI PRL ++
Sbjct: 1165 MSMNIAPRLMVS 1176
[85][TOP]
>UniRef100_B3LYR3 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3LYR3_DROAN
Length = 1176
Score = 65.9 bits (159), Expect = 1e-09
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ +C CGL+ N T C CKN QIS ++LPYA KLL QEL
Sbjct: 1105 LRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECKGCKNKTQISQVRLPYAAKLLFQEL 1164
Query: 220 QSMNIVPRLKLA 185
SMNI PRL ++
Sbjct: 1165 MSMNIAPRLMVS 1176
[86][TOP]
>UniRef100_A7SHD8 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7SHD8_NEMVE
Length = 1182
Score = 65.9 bits (159), Expect = 1e-09
Identities = 29/60 (48%), Positives = 38/60 (63%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLADPL 176
VC CGL+ N T C CKN Q+S +++PYA KLL QEL SM+I PR+ + DP+
Sbjct: 1122 VCNLCGLIAIANLRNNTFECRGCKNKTQVSRIRMPYAAKLLFQELMSMSIAPRMMVCDPV 1181
[87][TOP]
>UniRef100_Q6CLR1 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CLR1_KLULA
Length = 1142
Score = 65.9 bits (159), Expect = 1e-09
Identities = 31/58 (53%), Positives = 37/58 (63%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CGL+GY +G C SCK + + M +PYA KLL QEL +MNI PRLKL D
Sbjct: 1087 VCEKCGLMGY------SGWCTSCKTAEHVVKMTIPYAAKLLFQELLAMNIAPRLKLGD 1138
[88][TOP]
>UniRef100_B5RUZ7 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RUZ7_DEBHA
Length = 1165
Score = 65.9 bits (159), Expect = 1e-09
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
+C CGL+GY ++ C SCK+ + I M +PYA KLL QEL SMNI PRLKL D
Sbjct: 1112 ICNQCGLMGYNSW------CTSCKSSEYIIKMTIPYAAKLLFQELLSMNIAPRLKLGD 1163
[89][TOP]
>UniRef100_A5DLE5 DNA-directed RNA polymerase n=1 Tax=Pichia guilliermondii
RepID=A5DLE5_PICGU
Length = 1156
Score = 65.9 bits (159), Expect = 1e-09
Identities = 31/58 (53%), Positives = 39/58 (67%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC +CGL+GY ++ C SCK+ + + M +PYA KLL QEL SMNI PRLKL D
Sbjct: 1103 VCNNCGLMGYNSW------CTSCKSSENVIKMTIPYAAKLLFQELLSMNIAPRLKLDD 1154
[90][TOP]
>UniRef100_UPI000186D6F3 DNA-directed RNA polymerase II 135 kDa polypeptide, putative n=1
Tax=Pediculus humanus corporis RepID=UPI000186D6F3
Length = 1175
Score = 65.5 bits (158), Expect = 2e-09
Identities = 34/69 (49%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPFT-QVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CGL+ N T C CKN QIS ++LPYA KLL QEL
Sbjct: 1104 LRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKGCKNKTQISQVRLPYAAKLLFQEL 1163
Query: 220 QSMNIVPRL 194
SMNI PRL
Sbjct: 1164 MSMNIAPRL 1172
[91][TOP]
>UniRef100_Q7QAK7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7QAK7_ANOGA
Length = 1175
Score = 65.5 bits (158), Expect = 2e-09
Identities = 34/69 (49%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPFT-QVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CGL+ N T C CKN QIS +KLPYA KLL QEL
Sbjct: 1104 LRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKGCKNKTQISQVKLPYAAKLLFQEL 1163
Query: 220 QSMNIVPRL 194
+MNI PRL
Sbjct: 1164 MAMNIAPRL 1172
[92][TOP]
>UniRef100_B4PTC0 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4PTC0_DROYA
Length = 1176
Score = 65.5 bits (158), Expect = 2e-09
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ +C CGL+ N T C CKN QIS ++LPYA KLL QEL
Sbjct: 1105 LRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECKGCKNKTQISQVRLPYAAKLLFQEL 1164
Query: 220 QSMNIVPRL 194
SMNI PRL
Sbjct: 1165 MSMNIAPRL 1173
[93][TOP]
>UniRef100_B4K015 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4K015_DROGR
Length = 1175
Score = 65.5 bits (158), Expect = 2e-09
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ +C CGL+ N T C CKN QIS ++LPYA KLL QEL
Sbjct: 1104 LRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECKGCKNKTQISQVRLPYAAKLLFQEL 1163
Query: 220 QSMNIVPRL 194
SMNI PRL
Sbjct: 1164 MSMNIAPRL 1172
[94][TOP]
>UniRef100_B4JTD0 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4JTD0_DROGR
Length = 267
Score = 65.5 bits (158), Expect = 2e-09
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ +C CGL+ N T C CKN QIS ++LPYA KLL QEL
Sbjct: 196 LRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECKGCKNKTQISQVRLPYAAKLLFQEL 255
Query: 220 QSMNIVPRL 194
SMNI PRL
Sbjct: 256 MSMNIAPRL 264
[95][TOP]
>UniRef100_Q298X6 DNA-directed RNA polymerase n=2 Tax=pseudoobscura subgroup
RepID=Q298X6_DROPS
Length = 1176
Score = 65.5 bits (158), Expect = 2e-09
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ +C CGL+ N T C CKN QIS ++LPYA KLL QEL
Sbjct: 1105 LRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECKGCKNKTQISQVRLPYAAKLLFQEL 1164
Query: 220 QSMNIVPRL 194
SMNI PRL
Sbjct: 1165 MSMNIAPRL 1173
[96][TOP]
>UniRef100_B3P0M0 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3P0M0_DROER
Length = 1176
Score = 65.5 bits (158), Expect = 2e-09
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ +C CGL+ N T C CKN QIS ++LPYA KLL QEL
Sbjct: 1105 LRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECKGCKNKTQISQVRLPYAAKLLFQEL 1164
Query: 220 QSMNIVPRL 194
SMNI PRL
Sbjct: 1165 MSMNIAPRL 1173
[97][TOP]
>UniRef100_A9V2W9 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
RepID=A9V2W9_MONBE
Length = 1097
Score = 65.5 bits (158), Expect = 2e-09
Identities = 35/69 (50%), Positives = 43/69 (62%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F C CGLLG G C CK+ IS ++LPYACKLL QELQS
Sbjct: 1031 RLMISSDAFE-VHACSQCGLLG------SAGWCQYCKSSRGISKLQLPYACKLLFQELQS 1083
Query: 214 MNIVPRLKL 188
MNIVPRL L
Sbjct: 1084 MNIVPRLTL 1092
[98][TOP]
>UniRef100_P08266 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=melanogaster
subgroup RepID=RPB2_DROME
Length = 1176
Score = 65.5 bits (158), Expect = 2e-09
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ +C CGL+ N T C CKN QIS ++LPYA KLL QEL
Sbjct: 1105 LRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECKGCKNKTQISQVRLPYAAKLLFQEL 1164
Query: 220 QSMNIVPRL 194
SMNI PRL
Sbjct: 1165 MSMNIAPRL 1173
[99][TOP]
>UniRef100_A8P4S3 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide,
putative n=1 Tax=Brugia malayi RepID=A8P4S3_BRUMA
Length = 1104
Score = 65.1 bits (157), Expect = 3e-09
Identities = 32/74 (43%), Positives = 47/74 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ V++ F VC CGL+GY ++ C C++ ++ +K+PYACKLL QELQS
Sbjct: 1038 RLMVSSDEFK-VDVCSQCGLIGYKSW------CQMCRSSRTMATIKIPYACKLLFQELQS 1090
Query: 214 MNIVPRLKLADPLD 173
MNIVP++ L+ D
Sbjct: 1091 MNIVPKISLSKYTD 1104
[100][TOP]
>UniRef100_C5M3E6 DNA-directed RNA polymerase n=1 Tax=Candida tropicalis MYA-3404
RepID=C5M3E6_CANTT
Length = 1159
Score = 65.1 bits (157), Expect = 3e-09
Identities = 31/71 (43%), Positives = 45/71 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGL+GY N+ C +C++ + + M +PYA KLL QEL S
Sbjct: 1094 RLMISSDAFE-VDVCNKCGLMGYNNW------CTTCQSSENVIKMTIPYAAKLLFQELLS 1146
Query: 214 MNIVPRLKLAD 182
MNI PRL+L D
Sbjct: 1147 MNIAPRLRLGD 1157
[101][TOP]
>UniRef100_P22276 DNA-directed RNA polymerase III subunit RPC2 n=5 Tax=Saccharomyces
cerevisiae RepID=RPC2_YEAST
Length = 1149
Score = 65.1 bits (157), Expect = 3e-09
Identities = 33/71 (46%), Positives = 45/71 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGL+GY +G C +CK+ + I M +PYA KLL QEL S
Sbjct: 1082 RLMISSDAFE-VDVCDKCGLMGY------SGWCTTCKSAENIIKMTIPYAAKLLFQELLS 1134
Query: 214 MNIVPRLKLAD 182
MNI PRL+L D
Sbjct: 1135 MNIAPRLRLED 1145
[102][TOP]
>UniRef100_UPI0001865901 hypothetical protein BRAFLDRAFT_125505 n=1 Tax=Branchiostoma floridae
RepID=UPI0001865901
Length = 1176
Score = 64.7 bits (156), Expect = 3e-09
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CGL+ N +T C CKN QIS +++PYACKLL QEL
Sbjct: 1105 LRERLFEVSDPYQVHVCNLCGLIAIANLRNQTFECRGCKNKTQISKIRIPYACKLLFQEL 1164
Query: 220 QSMNIVPRL 194
+M+I PR+
Sbjct: 1165 MAMSIAPRM 1173
[103][TOP]
>UniRef100_UPI0000D5712C PREDICTED: similar to AGAP003648-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D5712C
Length = 1175
Score = 64.7 bits (156), Expect = 3e-09
Identities = 31/54 (57%), Positives = 34/54 (62%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
VC CGL+ N T C CKN QIS ++LPYA KLL QEL SMNI PRL
Sbjct: 1119 VCNFCGLIAIANMRNNTFECKGCKNKTQISQVRLPYAAKLLFQELMSMNIAPRL 1172
[104][TOP]
>UniRef100_Q6FLJ9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FLJ9_CANGA
Length = 1133
Score = 64.7 bits (156), Expect = 3e-09
Identities = 32/71 (45%), Positives = 46/71 (64%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC +CGL+GY +G C +CK+ + I M +PYA KLL QEL +
Sbjct: 1066 RLMISSDAFE-VDVCSNCGLMGY------SGWCSTCKSAEHIIKMTIPYAAKLLFQELLA 1118
Query: 214 MNIVPRLKLAD 182
MNI PRL+L D
Sbjct: 1119 MNIAPRLRLED 1129
[105][TOP]
>UniRef100_Q59M52 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q59M52_CANAL
Length = 1157
Score = 64.7 bits (156), Expect = 3e-09
Identities = 31/71 (43%), Positives = 45/71 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGL+GY ++ C +CK+ + + M +PYA KLL QEL S
Sbjct: 1092 RLMISSDAFE-VDVCNKCGLMGYNSW------CTTCKSSENVIKMTIPYAAKLLFQELLS 1144
Query: 214 MNIVPRLKLAD 182
MNI PRL+L D
Sbjct: 1145 MNIAPRLRLGD 1155
[106][TOP]
>UniRef100_A5E0Z1 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5E0Z1_LODEL
Length = 1157
Score = 64.7 bits (156), Expect = 3e-09
Identities = 32/71 (45%), Positives = 44/71 (61%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGL+GY ++ C +CK + I M +PYA KLL QEL S
Sbjct: 1092 RLMISSDAFE-VDVCNKCGLMGYNSW------CTTCKGSENIIKMTIPYAAKLLFQELLS 1144
Query: 214 MNIVPRLKLAD 182
MNI PRL+L D
Sbjct: 1145 MNIAPRLRLGD 1155
[107][TOP]
>UniRef100_A3LP81 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3LP81_PICST
Length = 1155
Score = 64.7 bits (156), Expect = 3e-09
Identities = 32/71 (45%), Positives = 45/71 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGL+GY ++ C +CK+ + + M +PYA KLL QEL S
Sbjct: 1090 RLMISSDAFE-VDVCNKCGLMGYNSW------CTTCKSFEHVIKMTIPYAAKLLFQELLS 1142
Query: 214 MNIVPRLKLAD 182
MNI PRLKL D
Sbjct: 1143 MNIAPRLKLGD 1153
[108][TOP]
>UniRef100_B6HTA4 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6HTA4_PENCW
Length = 1208
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
+C CG +GY N+ CP CK+ + M +PYA KLLIQEL SMN+ RLKL D
Sbjct: 1149 ICEKCGFMGYLNW------CPGCKSSRSVVKMVIPYAAKLLIQELMSMNVTARLKLDD 1200
[109][TOP]
>UniRef100_UPI000186CFA7 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide,
putative n=1 Tax=Pediculus humanus corporis
RepID=UPI000186CFA7
Length = 1137
Score = 63.9 bits (154), Expect = 6e-09
Identities = 33/69 (47%), Positives = 44/69 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGL+ Y + C CK+ +IS +KLPYA KLL QEL+S
Sbjct: 1070 RLMISSDAFQ-CDVCNECGLIAYSKW------CHGCKSSKEISTIKLPYATKLLFQELRS 1122
Query: 214 MNIVPRLKL 188
MNIVPRL L
Sbjct: 1123 MNIVPRLSL 1131
[110][TOP]
>UniRef100_A8IY03 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IY03_CHLRE
Length = 1161
Score = 63.9 bits (154), Expect = 6e-09
Identities = 29/53 (54%), Positives = 39/53 (73%)
Frame = -2
Query: 340 GLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
GLLG+++ V P + D ++ +K+PYACKLL QELQSMNI+PRL+LAD
Sbjct: 1108 GLLGWWDAHRNCPVSPVDRTSDNMATIKIPYACKLLFQELQSMNIIPRLRLAD 1160
[111][TOP]
>UniRef100_B3S5S8 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3S5S8_TRIAD
Length = 1016
Score = 63.9 bits (154), Expect = 6e-09
Identities = 31/69 (44%), Positives = 45/69 (65%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC +CGLL Y + C C + +S++++PYACKLL QELQS
Sbjct: 950 RLMISSDAFE-VDVCNNCGLLAYSKW------CHYCHSSCHVSSLQIPYACKLLFQELQS 1002
Query: 214 MNIVPRLKL 188
MNI+PRL L
Sbjct: 1003 MNIIPRLSL 1011
[112][TOP]
>UniRef100_B6JW67 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JW67_SCHJY
Length = 1160
Score = 63.9 bits (154), Expect = 6e-09
Identities = 31/58 (53%), Positives = 37/58 (63%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC +CGLLGY G C SC++ + M +PYA KLL QEL SMNI+PRL L D
Sbjct: 1105 VCENCGLLGY------KGWCNSCESSKHVVKMTIPYAAKLLFQELMSMNIIPRLALED 1156
[113][TOP]
>UniRef100_UPI0000221AC5 hypothetical protein CBG18197 n=1 Tax=Caenorhabditis briggsae AF16
RepID=UPI0000221AC5
Length = 1194
Score = 63.5 bits (153), Expect = 7e-09
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC +CGL+ N + C +C+N Q+S +++PYACKLL QEL
Sbjct: 1109 LRERLFEVSDPYHVYVCNNCGLIVVANLRTNSFECKACRNKTQVSAVRIPYACKLLFQEL 1168
Query: 220 QSMNIVPRL 194
SM+I PRL
Sbjct: 1169 MSMSIAPRL 1177
[114][TOP]
>UniRef100_A8XS50 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae
RepID=A8XS50_CAEBR
Length = 1215
Score = 63.5 bits (153), Expect = 7e-09
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC +CGL+ N + C +C+N Q+S +++PYACKLL QEL
Sbjct: 1130 LRERLFEVSDPYHVYVCNNCGLIVVANLRTNSFECKACRNKTQVSAVRIPYACKLLFQEL 1189
Query: 220 QSMNIVPRL 194
SM+I PRL
Sbjct: 1190 MSMSIAPRL 1198
[115][TOP]
>UniRef100_A7TQC8 DNA-directed RNA polymerase n=1 Tax=Vanderwaltozyma polyspora DSM
70294 RepID=A7TQC8_VANPO
Length = 1139
Score = 63.5 bits (153), Expect = 7e-09
Identities = 32/71 (45%), Positives = 45/71 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CGL+GY +G C +CK+ + + M +PYA KLL QEL S
Sbjct: 1072 RLMISSDAFE-VDVCDKCGLMGY------SGWCSTCKSAEHNNKMTIPYAAKLLFQELLS 1124
Query: 214 MNIVPRLKLAD 182
MNI PRL+L D
Sbjct: 1125 MNIAPRLRLED 1135
[116][TOP]
>UniRef100_Q10578 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Caenorhabditis
elegans RepID=RPB2_CAEEL
Length = 1193
Score = 63.5 bits (153), Expect = 7e-09
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC +CGL+ N + C +C+N Q+S +++PYACKLL QEL
Sbjct: 1109 LRERLFEVSDPYHVYVCNNCGLIVVANLRTNSFECKACRNKTQVSAVRIPYACKLLFQEL 1168
Query: 220 QSMNIVPRL 194
SM+I PRL
Sbjct: 1169 MSMSIAPRL 1177
[117][TOP]
>UniRef100_UPI000180B7B7 PREDICTED: similar to POLR2B protein n=1 Tax=Ciona intestinalis
RepID=UPI000180B7B7
Length = 1173
Score = 63.2 bits (152), Expect = 1e-08
Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CGL+ N T C CKN IS +++PYACKLL QEL
Sbjct: 1102 LRERLFEASDPYRVHVCNLCGLIAIANLRSHTFECRGCKNKTHISQVRMPYACKLLFQEL 1161
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1162 MSMSIAPRM 1170
[118][TOP]
>UniRef100_Q1L5Z3 DNA-directed RNA polymerase n=1 Tax=Antirrhinum majus
RepID=Q1L5Z3_ANTMA
Length = 1198
Score = 63.2 bits (152), Expect = 1e-08
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CGL+G N + + C SCKN I + +PYACKLLIQEL SM I PRL D
Sbjct: 1129 VCERCGLMGIANLKKHSYECRSCKNKTDIVQIYIPYACKLLIQELMSMAIAPRLLTND 1186
[119][TOP]
>UniRef100_B7Q0E7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis
RepID=B7Q0E7_IXOSC
Length = 1141
Score = 63.2 bits (152), Expect = 1e-08
Identities = 29/56 (51%), Positives = 39/56 (69%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKL 188
VCR CGLLGY + C C++ ++++++PYACKLL QEL SMNI+PRL L
Sbjct: 1087 VCRGCGLLGYSRW------CHFCRSSRTMASLRVPYACKLLFQELLSMNIIPRLDL 1136
[120][TOP]
>UniRef100_A8Q7K3 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8Q7K3_BRUMA
Length = 1185
Score = 63.2 bits (152), Expect = 1e-08
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ +C +CGL+ N + C +C+N Q+S ++PYACKLL QEL
Sbjct: 1114 LRERLFEVSDPYHVYICNNCGLIVVANLRTNSFECKACRNKTQVSAFRIPYACKLLFQEL 1173
Query: 220 QSMNIVPRLKLA 185
SM+I PRL ++
Sbjct: 1174 MSMSIAPRLMVS 1185
[121][TOP]
>UniRef100_A7EEL3 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980
UF-70 RepID=A7EEL3_SCLS1
Length = 1230
Score = 63.2 bits (152), Expect = 1e-08
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
+C +CGL+GY +G C +CK+ +S M +PYA KLL+QE+ SMN++ RLKL D
Sbjct: 1169 ICETCGLMGY------SGWCQTCKSSKGVSTMTMPYAAKLLVQEMLSMNVLVRLKLED 1220
[122][TOP]
>UniRef100_A6RTM2 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10
RepID=A6RTM2_BOTFB
Length = 450
Score = 63.2 bits (152), Expect = 1e-08
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
+C +CGL+GY +G C +CK+ +S M +PYA KLL+QE+ SMN++ RLKL D
Sbjct: 389 ICETCGLMGY------SGWCQTCKSSKGVSTMTMPYAAKLLVQEMLSMNVLVRLKLED 440
[123][TOP]
>UniRef100_C0HA74 DNA-directed RNA polymerase n=1 Tax=Salmo salar RepID=C0HA74_SALSA
Length = 1174
Score = 62.8 bits (151), Expect = 1e-08
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CGL+ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1103 LRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1162
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1163 MSMSIAPRM 1171
[124][TOP]
>UniRef100_C1HBD0 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1HBD0_PARBA
Length = 1205
Score = 62.8 bits (151), Expect = 1e-08
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC SCG +GY +G C CK+ + M +PYA KLL+QEL SMN+V RLKLAD
Sbjct: 1146 VCESCGFMGY------SGWCQRCKSSRGVVKMIIPYAAKLLVQELFSMNVVARLKLAD 1197
[125][TOP]
>UniRef100_Q7Q416 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7Q416_ANOGA
Length = 1089
Score = 62.4 bits (150), Expect = 2e-08
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VC CG L Y ++ C +C++ +S + +PYACKLL QEL S
Sbjct: 1025 RLMISSDAFD-VDVCNVCGRLAYSSW------CHNCRSSASVSTISMPYACKLLFQELTS 1077
Query: 214 MNIVPRLKL 188
MNIVPRLKL
Sbjct: 1078 MNIVPRLKL 1086
[126][TOP]
>UniRef100_C4M3E3 DNA-directed RNA polymerase n=1 Tax=Entamoeba histolytica HM-1:IMSS
RepID=C4M3E3_ENTHI
Length = 1122
Score = 62.4 bits (150), Expect = 2e-08
Identities = 27/56 (48%), Positives = 39/56 (69%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKL 188
VC+ CGL+G+ +G C C++ +N+ +PYACKLL QE+QSMN+VPRL +
Sbjct: 1070 VCKKCGLIGH------SGYCKFCESSLYCTNVTMPYACKLLFQEMQSMNVVPRLSI 1119
[127][TOP]
>UniRef100_Q9P6E7 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
RepID=Q9P6E7_NEUCR
Length = 1155
Score = 62.4 bits (150), Expect = 2e-08
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC+ CGL GY Y C +CK+ ++ M +PYACKLL+QEL SMN+ +LKL D
Sbjct: 1098 VCQECGLFGYKGY------CNACKSTRNVTQMTMPYACKLLVQELISMNVGVKLKLED 1149
[128][TOP]
>UniRef100_UPI0001B09250 DNA directed RNA polymerase II polypeptide B n=1 Tax=Danio rerio
RepID=UPI0001B09250
Length = 1174
Score = 62.0 bits (149), Expect = 2e-08
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
VC CGL+ N T C C+N QIS +++PYACKLL QEL SM+I PR+
Sbjct: 1118 VCNLCGLMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRM 1171
[129][TOP]
>UniRef100_UPI000194C2A3 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide B, 140kDa
n=1 Tax=Taeniopygia guttata RepID=UPI000194C2A3
Length = 1174
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1103 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1162
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1163 MSMSIAPRM 1171
[130][TOP]
>UniRef100_UPI0001795E58 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB2
(RNA polymerase II subunit B2) (DNA-directed RNA
polymerase II subunit B) (RNA polymerase II subunit 2)
(DNA-directed RNA polymerase II 140 kDa polypeptide) n=1
Tax=Equus caballus RepID=UPI0001795E58
Length = 1174
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1103 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1162
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1163 MSMSIAPRM 1171
[131][TOP]
>UniRef100_UPI0000F2D75F PREDICTED: similar to RNA polymerase II 140 kDa subunit n=1
Tax=Monodelphis domestica RepID=UPI0000F2D75F
Length = 1174
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1103 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1162
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1163 MSMSIAPRM 1171
[132][TOP]
>UniRef100_UPI0000E20419 PREDICTED: DNA directed RNA polymerase II polypeptide B isoform 1 n=1
Tax=Pan troglodytes RepID=UPI0000E20419
Length = 1099
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1028 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1087
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1088 MSMSIAPRM 1096
[133][TOP]
>UniRef100_P30876 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=Catarrhini
RepID=RPB2_HUMAN
Length = 1174
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1103 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1162
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1163 MSMSIAPRM 1171
[134][TOP]
>UniRef100_UPI00005A2A5D PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
17 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5D
Length = 1099
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1028 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1087
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1088 MSMSIAPRM 1096
[135][TOP]
>UniRef100_UPI00005A2A5C PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
16 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5C
Length = 1173
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1102 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1161
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1162 MSMSIAPRM 1170
[136][TOP]
>UniRef100_UPI00005A2A5B PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
15 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5B
Length = 1179
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1108 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1167
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1168 MSMSIAPRM 1176
[137][TOP]
>UniRef100_UPI00005A2A5A PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
14 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5A
Length = 1175
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1104 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1163
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1164 MSMSIAPRM 1172
[138][TOP]
>UniRef100_UPI00005A2A59 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
13 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A59
Length = 1180
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1109 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1168
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1169 MSMSIAPRM 1177
[139][TOP]
>UniRef100_UPI00005A2A58 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
12 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A58
Length = 1174
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1103 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1162
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1163 MSMSIAPRM 1171
[140][TOP]
>UniRef100_UPI00005A2A57 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
11 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A57
Length = 1180
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1109 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1168
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1169 MSMSIAPRM 1177
[141][TOP]
>UniRef100_UPI00005A2A56 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
10 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A56
Length = 1166
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1095 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1154
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1155 MSMSIAPRM 1163
[142][TOP]
>UniRef100_UPI00005A2A55 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
9 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A55
Length = 1182
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1111 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1170
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1171 MSMSIAPRM 1179
[143][TOP]
>UniRef100_UPI00005A2A54 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
8 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A54
Length = 1173
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1102 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1161
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1162 MSMSIAPRM 1170
[144][TOP]
>UniRef100_UPI00005A2A53 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
7 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A53
Length = 1113
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1042 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1101
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1102 MSMSIAPRM 1110
[145][TOP]
>UniRef100_UPI00005A2A52 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
6 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A52
Length = 1162
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1091 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1150
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1151 MSMSIAPRM 1159
[146][TOP]
>UniRef100_UPI00005A2A50 PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide B isoform 4 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A2A50
Length = 221
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 150 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 209
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 210 MSMSIAPRM 218
[147][TOP]
>UniRef100_UPI00017B4CC9 UPI00017B4CC9 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B4CC9
Length = 1147
Score = 62.0 bits (149), Expect = 2e-08
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
VC CGL+ N T C C+N QIS +++PYACKLL QEL SM+I PR+
Sbjct: 1091 VCNLCGLMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRM 1144
[148][TOP]
>UniRef100_UPI00016DFC9D UPI00016DFC9D related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016DFC9D
Length = 1045
Score = 62.0 bits (149), Expect = 2e-08
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
VC CGL+ N T C C+N QIS +++PYACKLL QEL SM+I PR+
Sbjct: 989 VCNLCGLMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRM 1042
[149][TOP]
>UniRef100_UPI0000EB23D9 DNA-directed RNA polymerase II subunit RPB2 (EC 2.7.7.6) (RNA
polymerase II subunit B2) (DNA-directed RNA polymerase II
subunit B) (RNA polymerase II subunit 2) (DNA-directed
RNA polymerase II 140 kDa polypeptide). n=1 Tax=Canis
lupus familiaris RepID=UPI0000EB23D9
Length = 1176
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1105 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1164
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1165 MSMSIAPRM 1173
[150][TOP]
>UniRef100_UPI0000F3357E UPI0000F3357E related cluster n=1 Tax=Bos taurus RepID=UPI0000F3357E
Length = 1177
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1106 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1165
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1166 MSMSIAPRM 1174
[151][TOP]
>UniRef100_UPI0000ECC4A8 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1
Tax=Gallus gallus RepID=UPI0000ECC4A8
Length = 1176
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1105 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1164
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1165 MSMSIAPRM 1173
[152][TOP]
>UniRef100_UPI00003AD7E4 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1
Tax=Gallus gallus RepID=UPI00003AD7E4
Length = 1174
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1103 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1162
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1163 MSMSIAPRM 1171
[153][TOP]
>UniRef100_Q5ZMN9 DNA-directed RNA polymerase n=1 Tax=Gallus gallus RepID=Q5ZMN9_CHICK
Length = 1174
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1103 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1162
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1163 MSMSIAPRM 1171
[154][TOP]
>UniRef100_Q4T1Y4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon nigroviridis
RepID=Q4T1Y4_TETNG
Length = 1217
Score = 62.0 bits (149), Expect = 2e-08
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
VC CGL+ N T C C+N QIS +++PYACKLL QEL SM+I PR+
Sbjct: 1161 VCNLCGLMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRM 1214
[155][TOP]
>UniRef100_Q9MZ21 DNA-directed RNA polymerase (Fragment) n=1 Tax=Sus scrofa
RepID=Q9MZ21_PIG
Length = 381
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 310 LRERLFEASDPYQAHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 369
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 370 MSMSIAPRM 378
[156][TOP]
>UniRef100_A5PJW8 DNA-directed RNA polymerase n=1 Tax=Bos taurus RepID=A5PJW8_BOVIN
Length = 1174
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1103 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1162
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1163 MSMSIAPRM 1171
[157][TOP]
>UniRef100_B4DR40 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DR40_HUMAN
Length = 1083
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1012 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1071
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1072 MSMSIAPRM 1080
[158][TOP]
>UniRef100_B4DHJ3 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DHJ3_HUMAN
Length = 1167
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1096 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1155
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1156 MSMSIAPRM 1164
[159][TOP]
>UniRef100_B4DH29 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DH29_HUMAN
Length = 1099
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1028 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1087
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1088 MSMSIAPRM 1096
[160][TOP]
>UniRef100_A8MW88 DNA-directed RNA polymerase (Fragment) n=1 Tax=Homo sapiens
RepID=A8MW88_HUMAN
Length = 1173
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1102 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1161
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1162 MSMSIAPRM 1170
[161][TOP]
>UniRef100_Q6CEE6 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CEE6_YARLI
Length = 1169
Score = 62.0 bits (149), Expect = 2e-08
Identities = 32/58 (55%), Positives = 36/58 (62%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC+ CGLLGY G C SC+ + M LPYA KLL QEL SMNI PRLKL +
Sbjct: 1116 VCQKCGLLGYQ------GWCNSCQTTAHVVKMTLPYAAKLLFQELVSMNIAPRLKLKE 1167
[162][TOP]
>UniRef100_Q2URF4 DNA-directed RNA polymerase n=1 Tax=Aspergillus oryzae
RepID=Q2URF4_ASPOR
Length = 1180
Score = 62.0 bits (149), Expect = 2e-08
Identities = 29/58 (50%), Positives = 35/58 (60%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CG +GY N+ C CK+ + M +PYA KLLIQEL SMN+ RLKL D
Sbjct: 1121 VCEQCGFMGYLNW------CQRCKSSRSVVKMAIPYAAKLLIQELMSMNVTARLKLED 1172
[163][TOP]
>UniRef100_C5JTE0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis SLH14081
RepID=C5JTE0_AJEDS
Length = 1204
Score = 62.0 bits (149), Expect = 2e-08
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC SCG +GY G C CK + M +PYA KLL+QEL SMN+V RLKLAD
Sbjct: 1145 VCESCGFMGYL------GWCQRCKTSRGVVKMVIPYAAKLLVQELFSMNVVARLKLAD 1196
[164][TOP]
>UniRef100_C5GKN6 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3
RepID=C5GKN6_AJEDR
Length = 1228
Score = 62.0 bits (149), Expect = 2e-08
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC SCG +GY G C CK + M +PYA KLL+QEL SMN+V RLKLAD
Sbjct: 1169 VCESCGFMGYL------GWCQRCKTSRGVVKMVIPYAAKLLVQELFSMNVVARLKLAD 1220
[165][TOP]
>UniRef100_B8MYG2 DNA-directed RNA polymerase n=1 Tax=Aspergillus flavus NRRL3357
RepID=B8MYG2_ASPFN
Length = 1218
Score = 62.0 bits (149), Expect = 2e-08
Identities = 29/58 (50%), Positives = 35/58 (60%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CG +GY N+ C CK+ + M +PYA KLLIQEL SMN+ RLKL D
Sbjct: 1159 VCEQCGFMGYLNW------CQRCKSSRSVVKMAIPYAAKLLIQELMSMNVTARLKLED 1210
[166][TOP]
>UniRef100_Q10233 DNA-directed RNA polymerase III subunit RPC2 n=1
Tax=Schizosaccharomyces pombe RepID=RPC2_SCHPO
Length = 1165
Score = 62.0 bits (149), Expect = 2e-08
Identities = 32/58 (55%), Positives = 37/58 (63%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CGLLGY G C SC++ ++ M +PYA KLL QEL SMNIVPRL L D
Sbjct: 1110 VCGQCGLLGY------KGWCNSCQSTREVVKMTIPYAAKLLFQELLSMNIVPRLALED 1161
[167][TOP]
>UniRef100_Q8CFI7 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Mus musculus
RepID=RPB2_MOUSE
Length = 1174
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P+ VC CG++ N T C C+N QIS +++PYACKLL QEL
Sbjct: 1103 LRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQEL 1162
Query: 220 QSMNIVPRL 194
SM+I PR+
Sbjct: 1163 MSMSIAPRM 1171
[168][TOP]
>UniRef100_C8VU19 DNA-directed RNA polymerase III, beta subunit, putative
(AFU_orthologue; AFUA_1G02460) n=2 Tax=Emericella
nidulans RepID=C8VU19_EMENI
Length = 1225
Score = 61.6 bits (148), Expect = 3e-08
Identities = 29/58 (50%), Positives = 35/58 (60%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CG +GY N+ C CK+ + M +PYA KLLIQEL SMN+ RLKL D
Sbjct: 1166 VCEQCGFMGYLNW------CQRCKSSRSVVKMVIPYAAKLLIQELMSMNVTARLKLED 1217
[169][TOP]
>UniRef100_Q0CN89 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0CN89_ASPTN
Length = 1219
Score = 61.6 bits (148), Expect = 3e-08
Identities = 29/58 (50%), Positives = 35/58 (60%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CG +GY N+ C CK+ + M +PYA KLLIQEL SMN+ RLKL D
Sbjct: 1160 VCEKCGFMGYLNW------CQRCKSSRSVVKMVIPYAAKLLIQELMSMNVTARLKLED 1211
[170][TOP]
>UniRef100_B0XMI5 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus
RepID=B0XMI5_ASPFC
Length = 1200
Score = 61.6 bits (148), Expect = 3e-08
Identities = 29/58 (50%), Positives = 35/58 (60%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CG +GY N+ C CK+ + M +PYA KLLIQEL SMN+ RLKL D
Sbjct: 1141 VCEQCGFMGYLNW------CQRCKSSRSVVKMTIPYAAKLLIQELMSMNVTARLKLDD 1192
[171][TOP]
>UniRef100_A2Q8V9 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2Q8V9_ASPNC
Length = 1225
Score = 61.6 bits (148), Expect = 3e-08
Identities = 29/58 (50%), Positives = 35/58 (60%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CG +GY N+ C CK+ + M +PYA KLLIQEL SMN+ RLKL D
Sbjct: 1166 VCEQCGFMGYLNW------CQRCKSSRSVVKMAIPYAAKLLIQELMSMNVTARLKLDD 1217
[172][TOP]
>UniRef100_A1D510 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D510_NEOFI
Length = 1200
Score = 61.6 bits (148), Expect = 3e-08
Identities = 29/58 (50%), Positives = 35/58 (60%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CG +GY N+ C CK+ + M +PYA KLLIQEL SMN+ RLKL D
Sbjct: 1141 VCEQCGFMGYLNW------CQRCKSSRSVVKMTIPYAAKLLIQELMSMNVTARLKLDD 1192
[173][TOP]
>UniRef100_A1CS37 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
RepID=A1CS37_ASPCL
Length = 1246
Score = 61.6 bits (148), Expect = 3e-08
Identities = 29/58 (50%), Positives = 35/58 (60%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CG +GY N+ C CK+ + M +PYA KLLIQEL SMN+ RLKL D
Sbjct: 1187 VCEQCGFMGYLNW------CQRCKSSRSVVKMTIPYAAKLLIQELMSMNVTARLKLDD 1238
[174][TOP]
>UniRef100_A6R9I0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6R9I0_AJECN
Length = 1186
Score = 61.2 bits (147), Expect = 4e-08
Identities = 30/58 (51%), Positives = 36/58 (62%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC +CG +GY G C CK + M +PYA KLL+QEL SMN+V RLKLAD
Sbjct: 1127 VCENCGFMGYL------GWCQRCKTSRGVVKMAIPYAAKLLVQELFSMNVVARLKLAD 1178
[175][TOP]
>UniRef100_Q1DTS7 DNA-directed RNA polymerase n=2 Tax=Coccidioides RepID=Q1DTS7_COCIM
Length = 1233
Score = 60.8 bits (146), Expect = 5e-08
Identities = 30/58 (51%), Positives = 36/58 (62%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC +CG +GY G C CK + M +PYA KLL+QEL SMN+V RLKLAD
Sbjct: 1174 VCENCGFMGYL------GWCQRCKTSRGVVKMVIPYAAKLLVQELFSMNVVARLKLAD 1225
[176][TOP]
>UniRef100_C6HGH3 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus H143
RepID=C6HGH3_AJECH
Length = 1227
Score = 60.8 bits (146), Expect = 5e-08
Identities = 30/58 (51%), Positives = 36/58 (62%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC +CG +GY G C CK + M +PYA KLL+QEL SMN+V RLKLAD
Sbjct: 1168 VCENCGFMGYL------GWCQRCKTSRGVVKMVIPYAAKLLVQELFSMNVVARLKLAD 1219
[177][TOP]
>UniRef100_C0P0A1 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0P0A1_AJECG
Length = 1227
Score = 60.8 bits (146), Expect = 5e-08
Identities = 30/58 (51%), Positives = 36/58 (62%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC +CG +GY G C CK + M +PYA KLL+QEL SMN+V RLKLAD
Sbjct: 1168 VCENCGFMGYL------GWCQRCKTSRGVVKMVIPYAAKLLVQELFSMNVVARLKLAD 1219
[178][TOP]
>UniRef100_Q28ZV6 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
pseudoobscura RepID=Q28ZV6_DROPS
Length = 1137
Score = 60.5 bits (145), Expect = 6e-08
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VCR+CG L Y ++ C C++ +S + +PYACKLL QEL S
Sbjct: 1073 RLMISSDAFE-VDVCRTCGRLAYCSW------CHFCQSSAHVSKISMPYACKLLFQELTS 1125
Query: 214 MNIVPRLKLAD 182
MN+VP++ L D
Sbjct: 1126 MNVVPKMILED 1136
[179][TOP]
>UniRef100_B4GGQ4 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
RepID=B4GGQ4_DROPE
Length = 1137
Score = 60.5 bits (145), Expect = 6e-08
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VCR+CG L Y ++ C C++ +S + +PYACKLL QEL S
Sbjct: 1073 RLMISSDAFE-VDVCRTCGRLAYCSW------CHFCQSSAHVSKISMPYACKLLFQELTS 1125
Query: 214 MNIVPRLKLAD 182
MN+VP++ L D
Sbjct: 1126 MNVVPKMILED 1136
[180][TOP]
>UniRef100_B3S2W9 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3S2W9_TRIAD
Length = 1196
Score = 60.5 bits (145), Expect = 6e-08
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = -2
Query: 397 IRIKVANYSFPF-TQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ + S P+ +C CGL+ N T C C+N +IS +++PYACKLL QEL
Sbjct: 1091 LRERLYDASDPYIVHMCNLCGLVAVANLRNDTYECKGCRNKTRISQVRIPYACKLLFQEL 1150
Query: 220 QSMNIVPRL 194
SM++ PR+
Sbjct: 1151 MSMSLAPRI 1159
[181][TOP]
>UniRef100_UPI0000D56081 PREDICTED: similar to RNA polymerase III 128kD subunit CG8344-PA n=1
Tax=Tribolium castaneum RepID=UPI0000D56081
Length = 1122
Score = 60.1 bits (144), Expect = 8e-08
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKL 188
VC CG LGY G C SCK+ ++S++ +PYACKLL+ ELQ+MNI RL L
Sbjct: 1068 VCNLCGRLGY------CGWCNSCKSSREVSSITMPYACKLLLTELQAMNITARLTL 1117
[182][TOP]
>UniRef100_B4MR22 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4MR22_DROWI
Length = 999
Score = 60.1 bits (144), Expect = 8e-08
Identities = 30/71 (42%), Positives = 44/71 (61%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VCR CG L Y ++ C C++ +S + +PYACKLL QEL S
Sbjct: 935 RLMISSDAFE-VDVCRICGRLAYCSW------CHFCQSSAHVSKISMPYACKLLFQELTS 987
Query: 214 MNIVPRLKLAD 182
MN+VP+L L D
Sbjct: 988 MNVVPKLILED 998
[183][TOP]
>UniRef100_B3MH37 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3MH37_DROAN
Length = 1137
Score = 60.1 bits (144), Expect = 8e-08
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VCR+CG L Y ++ C C++ +S + +PYACKLL QEL S
Sbjct: 1073 RLMISSDAFE-VDVCRTCGRLAYCSW------CHFCQSSAYVSKISMPYACKLLFQELTS 1125
Query: 214 MNIVPRLKLAD 182
MN+VP++ L D
Sbjct: 1126 MNVVPKMILED 1136
[184][TOP]
>UniRef100_Q1L5Z2 DNA-directed RNA polymerase n=1 Tax=Petunia x hybrida
RepID=Q1L5Z2_PETHY
Length = 1203
Score = 59.7 bits (143), Expect = 1e-07
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
VC+ CGL+ N + + C SCKN I + +PYACKLLIQEL SM I PR+
Sbjct: 1136 VCQQCGLIAIANLKKISFECRSCKNKTDIVQVYIPYACKLLIQELMSMAIAPRM 1189
[185][TOP]
>UniRef100_Q4U9X1 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
RepID=Q4U9X1_THEAN
Length = 1223
Score = 59.7 bits (143), Expect = 1e-07
Identities = 28/58 (48%), Positives = 36/58 (62%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CGLL N + C +C N QIS + +PYACKLL+QEL +M I P+L L +
Sbjct: 1165 VCNFCGLLSVANLNNSSFQCTACDNKTQISQVTIPYACKLLLQELMAMAIYPKLILTE 1222
[186][TOP]
>UniRef100_Q4N2K9 DNA-directed RNA polymerase n=1 Tax=Theileria parva
RepID=Q4N2K9_THEPA
Length = 1190
Score = 59.7 bits (143), Expect = 1e-07
Identities = 28/58 (48%), Positives = 36/58 (62%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CGLL N + C +C N QIS + +PYACKLL+QEL +M I P+L L +
Sbjct: 1132 VCNFCGLLSVANLNNSSFQCTACDNKTQISQVTIPYACKLLLQELMAMAIYPKLILTE 1189
[187][TOP]
>UniRef100_C4JMP0 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JMP0_UNCRE
Length = 1202
Score = 59.7 bits (143), Expect = 1e-07
Identities = 29/58 (50%), Positives = 35/58 (60%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC +CG +GY G C CK + M +PYA KLL+QEL SMN+V R KLAD
Sbjct: 1143 VCENCGFMGYL------GWCQRCKTSRGVVKMAIPYAAKLLVQELFSMNVVARFKLAD 1194
[188][TOP]
>UniRef100_UPI00017918AB PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
(RNA polymerase III subunit C2) (DNA-directed RNA
polymerase III subunit B) (DNA-directed RNA polymerase
III 127.6 kDa polypeptide) (C128) n=1 Tax=Acyrthosiphon
pisum RepID=UPI00017918AB
Length = 1112
Score = 59.3 bits (142), Expect = 1e-07
Identities = 26/56 (46%), Positives = 37/56 (66%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKL 188
VC+ CGL Y +G C C+ + + +K+PYACKLL QELQ+M+IVP++ L
Sbjct: 1058 VCKLCGLFSY------SGWCHMCQKSNSVCRIKMPYACKLLFQELQAMSIVPKISL 1107
[189][TOP]
>UniRef100_B4LKV4 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4LKV4_DROVI
Length = 1137
Score = 59.3 bits (142), Expect = 1e-07
Identities = 29/69 (42%), Positives = 44/69 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VCR+CG L Y ++ C C++ +S + +PYACKLL QEL S
Sbjct: 1073 RLMISSDAFE-VDVCRTCGRLAYCSW------CHFCQSSAHVSKISMPYACKLLFQELTS 1125
Query: 214 MNIVPRLKL 188
MN+VP+L L
Sbjct: 1126 MNVVPKLIL 1134
[190][TOP]
>UniRef100_B4KPU7 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4KPU7_DROMO
Length = 1136
Score = 59.3 bits (142), Expect = 1e-07
Identities = 29/69 (42%), Positives = 44/69 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VCR+CG L Y ++ C C++ +S + +PYACKLL QEL S
Sbjct: 1072 RLMISSDAFE-VDVCRTCGRLAYCSW------CHFCQSSAHVSKISMPYACKLLFQELTS 1124
Query: 214 MNIVPRLKL 188
MN+VP+L L
Sbjct: 1125 MNVVPKLIL 1133
[191][TOP]
>UniRef100_B4J5G6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4J5G6_DROGR
Length = 1137
Score = 59.3 bits (142), Expect = 1e-07
Identities = 29/69 (42%), Positives = 44/69 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VCR+CG L Y ++ C C++ +S + +PYACKLL QEL S
Sbjct: 1073 RLMISSDAFE-VDVCRTCGRLAYCSW------CHFCQSSAHVSKISMPYACKLLFQELTS 1125
Query: 214 MNIVPRLKL 188
MN+VP+L L
Sbjct: 1126 MNVVPKLIL 1134
[192][TOP]
>UniRef100_Q8SQY8 DNA-directed RNA polymerase n=1 Tax=Encephalitozoon cuniculi
RepID=Q8SQY8_ENCCU
Length = 1110
Score = 59.3 bits (142), Expect = 1e-07
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKL 188
VCRSCG+L + G C +CK G + +K+PYACKLL QEL SMNI+PRL +
Sbjct: 1061 VCRSCGVLAF------KGCCVACK-GTKPVKVKMPYACKLLFQELMSMNILPRLHI 1109
[193][TOP]
>UniRef100_Q6E6F3 DNA-directed RNA polymerase n=1 Tax=Antonospora locustae
RepID=Q6E6F3_ANTLO
Length = 1014
Score = 59.3 bits (142), Expect = 1e-07
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKL 188
+C CG++ Y N +C CK GD + + +PYACKLL QEL SMNI+PR+KL
Sbjct: 964 ICHRCGIIVYKN------MCTLCKRGDPVP-VDMPYACKLLFQELMSMNILPRIKL 1012
[194][TOP]
>UniRef100_B6QHR9 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224
RepID=B6QHR9_PENMQ
Length = 1212
Score = 59.3 bits (142), Expect = 1e-07
Identities = 27/58 (46%), Positives = 35/58 (60%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
+C CG +GY N+ C C++ + M +PYA KLLIQEL SMN+ RLKL D
Sbjct: 1153 ICEKCGFMGYQNW------CQRCRSSRGVVKMTIPYAAKLLIQELLSMNVTARLKLGD 1204
[195][TOP]
>UniRef100_A8NJT3 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130
RepID=A8NJT3_COPC7
Length = 1140
Score = 59.3 bits (142), Expect = 1e-07
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = -2
Query: 352 CRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
C+ CGL+GY G C CK+ +++ + +PYA KLL QEL +MN+VPRL L D
Sbjct: 1089 CQECGLMGY------NGWCTYCKSSKKMATLTIPYAAKLLFQELMAMNVVPRLVLDD 1139
[196][TOP]
>UniRef100_A9SJE5 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9SJE5_PHYPA
Length = 1185
Score = 58.9 bits (141), Expect = 2e-07
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
VC CG++ N + T C CKN I + +PYACKLL QEL SM I PR+
Sbjct: 1115 VCEHCGIIAIANLKKNTYECRGCKNNTDIVQVHIPYACKLLFQELMSMAIAPRM 1168
[197][TOP]
>UniRef100_A9UUX4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
RepID=A9UUX4_MONBE
Length = 1166
Score = 58.9 bits (141), Expect = 2e-07
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = -2
Query: 397 IRIKVANYSFPFT-QVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQEL 221
+R ++ S P++ VC CGL E C C+N ++S ++LPYACKLL QEL
Sbjct: 1091 LRERLFEVSDPYSLHVCDVCGLPCVAKLEKNEFECTRCRNSTRVSRIRLPYACKLLFQEL 1150
Query: 220 QSMNIVPRLKLAD 182
+M++VPR+ D
Sbjct: 1151 MTMSVVPRMMTDD 1163
[198][TOP]
>UniRef100_B8MJE1 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500
RepID=B8MJE1_TALSN
Length = 1212
Score = 58.9 bits (141), Expect = 2e-07
Identities = 27/58 (46%), Positives = 35/58 (60%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
+C CG +GY N+ C C++ + M +PYA KLLIQEL SMN+ RLKL D
Sbjct: 1153 ICEKCGFMGYQNW------CQRCRSSRGVVKMTIPYAAKLLIQELLSMNVTARLKLED 1204
[199][TOP]
>UniRef100_B0D7Q0 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0D7Q0_LACBS
Length = 1142
Score = 58.9 bits (141), Expect = 2e-07
Identities = 29/71 (40%), Positives = 42/71 (59%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ F C CGL+GY G C CK+ +++ + +PYA KLL QEL +
Sbjct: 1078 RLMISSDKFE-VNACEECGLMGY------NGWCTYCKSSKKMAQLTIPYAAKLLFQELMA 1130
Query: 214 MNIVPRLKLAD 182
MN+VPRL L D
Sbjct: 1131 MNVVPRLILDD 1141
[200][TOP]
>UniRef100_Q02061 DNA-directed RNA polymerase II subunit RPB2 n=1
Tax=Schizosaccharomyces pombe RepID=RPB2_SCHPO
Length = 1210
Score = 58.9 bits (141), Expect = 2e-07
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
VC CGL+ +Y+ + C SC+N + S + LPYA KLL QEL SMNI PRL
Sbjct: 1151 VCDICGLIAIASYKKDSYECRSCQNRTRFSQVYLPYAAKLLFQELMSMNIAPRL 1204
[201][TOP]
>UniRef100_Q1L5Z4 DNA-directed RNA polymerase n=1 Tax=Nicotiana sylvestris
RepID=Q1L5Z4_NICSY
Length = 1203
Score = 58.5 bits (140), Expect = 2e-07
Identities = 27/59 (45%), Positives = 36/59 (61%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLADP 179
VC+ CGL+ N + + C SC+N + +PYACKLLIQEL SM I PR+ +P
Sbjct: 1136 VCQQCGLIAIANLKKMSFECRSCRNKTDNVQVYIPYACKLLIQELMSMAIAPRMLTKEP 1194
[202][TOP]
>UniRef100_Q1L5Y8 DNA-directed RNA polymerase n=1 Tax=Antirrhinum majus
RepID=Q1L5Y8_ANTMA
Length = 1200
Score = 58.5 bits (140), Expect = 2e-07
Identities = 27/58 (46%), Positives = 33/58 (56%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CGL+ N + + C CKN I + +PYACKLL QEL SM I PR+ D
Sbjct: 1131 VCEQCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKD 1188
[203][TOP]
>UniRef100_B4P5Q3 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4P5Q3_DROYA
Length = 1137
Score = 58.5 bits (140), Expect = 2e-07
Identities = 28/69 (40%), Positives = 44/69 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VCR+CG L Y ++ C C++ +S + +PYACKLL QEL S
Sbjct: 1073 RLMISSDAFE-VDVCRTCGRLAYCSW------CHFCQSSANVSKISMPYACKLLFQELTS 1125
Query: 214 MNIVPRLKL 188
MN+VP++ L
Sbjct: 1126 MNVVPKMIL 1134
[204][TOP]
>UniRef100_B3NS93 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3NS93_DROER
Length = 1137
Score = 58.5 bits (140), Expect = 2e-07
Identities = 28/69 (40%), Positives = 44/69 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VCR+CG L Y ++ C C++ +S + +PYACKLL QEL S
Sbjct: 1073 RLMISSDAFE-VDVCRTCGRLAYCSW------CHFCQSSANVSKISMPYACKLLFQELTS 1125
Query: 214 MNIVPRLKL 188
MN+VP++ L
Sbjct: 1126 MNVVPKMIL 1134
[205][TOP]
>UniRef100_B2B0Z1 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
RepID=B2B0Z1_PODAN
Length = 1160
Score = 58.5 bits (140), Expect = 2e-07
Identities = 27/58 (46%), Positives = 36/58 (62%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CGL+GY Y C +CK ++ M +PYA KLL+QEL SMN+ R++L D
Sbjct: 1103 VCERCGLMGYKGY------CQTCKTTSNVTKMNMPYAAKLLLQELISMNVGVRMQLED 1154
[206][TOP]
>UniRef100_Q54J75 DNA-directed RNA polymerase II subunit rpb2 n=1 Tax=Dictyostelium
discoideum RepID=RPB2_DICDI
Length = 1170
Score = 58.5 bits (140), Expect = 2e-07
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
+C CGL+ N + + C CKN QIS +++PYA KLL QEL SM+I PR+
Sbjct: 1113 ICDICGLIAIANLKKNSFECRRCKNKTQISQIRMPYAAKLLFQELMSMSIAPRM 1166
[207][TOP]
>UniRef100_Q1L5B5 DNA-directed RNA polymerase n=1 Tax=Rhododendron macrophyllum
RepID=Q1L5B5_RHOMC
Length = 1191
Score = 58.2 bits (139), Expect = 3e-07
Identities = 27/58 (46%), Positives = 33/58 (56%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CGL+ N + + C CKN I + +PYACKLL QEL SM I PR+ D
Sbjct: 1122 VCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKD 1179
[208][TOP]
>UniRef100_Q1L5A5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Linanthus
californicus RepID=Q1L5A5_9ERIC
Length = 733
Score = 58.2 bits (139), Expect = 3e-07
Identities = 27/58 (46%), Positives = 33/58 (56%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CGL+ N + + C CKN I + +PYACKLL QEL SM I PR+ D
Sbjct: 666 VCERCGLVAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMMTKD 723
[209][TOP]
>UniRef100_Q4MYU5 DNA-directed RNA polymerase n=1 Tax=Theileria parva
RepID=Q4MYU5_THEPA
Length = 1244
Score = 58.2 bits (139), Expect = 3e-07
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = -2
Query: 358 QVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
+VC SCG +GY N+ C C+N + ++ + LPYACKLL QELQ+MNI P L
Sbjct: 1192 EVCSSCGFMGYNNF------CKFCQN-NSLAQVSLPYACKLLFQELQAMNIRPSL 1239
[210][TOP]
>UniRef100_B6AET6 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AET6_9CRYT
Length = 1184
Score = 58.2 bits (139), Expect = 3e-07
Identities = 32/61 (52%), Positives = 38/61 (62%), Gaps = 5/61 (8%)
Frame = -2
Query: 355 VCRSCGL-----LGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLK 191
VC CGL LG +YE C C N QIS + LPYACKLL+QEL +M+I PRL+
Sbjct: 1126 VCELCGLICTADLGKQHYE-----CKVCSNKSQISQVCLPYACKLLLQELMAMSIYPRLQ 1180
Query: 190 L 188
L
Sbjct: 1181 L 1181
[211][TOP]
>UniRef100_C7YHY2 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YHY2_NECH7
Length = 1156
Score = 58.2 bits (139), Expect = 3e-07
Identities = 26/58 (44%), Positives = 38/58 (65%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
+C+ CGL GY Y C +CK+ +++ M +PYA KLL+QEL SMN+ RL++ D
Sbjct: 1099 ICQQCGLFGYKGY------CHTCKSTREVTKMTMPYAAKLLVQELISMNVGVRLQMED 1150
[212][TOP]
>UniRef100_C5FVS4 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FVS4_NANOT
Length = 1211
Score = 58.2 bits (139), Expect = 3e-07
Identities = 28/58 (48%), Positives = 35/58 (60%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CG +GY +G C CK + M +PYA KLL+QEL SMN+V RL+L D
Sbjct: 1152 VCEGCGFMGY------SGWCQRCKTSAGVVKMVIPYAAKLLVQELFSMNVVARLRLQD 1203
[213][TOP]
>UniRef100_A4R1B6 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
RepID=A4R1B6_MAGGR
Length = 1158
Score = 58.2 bits (139), Expect = 3e-07
Identities = 27/58 (46%), Positives = 37/58 (63%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
+C+ CGL GY Y C +CK+ +++ M +PYA KLL+QEL SMN+ RL L D
Sbjct: 1101 ICQRCGLFGYKGY------CQTCKSTKEVTEMTMPYAAKLLVQELISMNVGVRLVLED 1152
[214][TOP]
>UniRef100_UPI000023E0C8 hypothetical protein FG00843.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023E0C8
Length = 1157
Score = 57.8 bits (138), Expect = 4e-07
Identities = 26/58 (44%), Positives = 38/58 (65%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
+C+ CGL GY Y C +CK+ +++ M +PYA KLL+QEL SMN+ RL++ D
Sbjct: 1100 ICQQCGLFGYKGY------CHTCKSTREVTKMTMPYAAKLLVQELISMNVGVRLQMDD 1151
[215][TOP]
>UniRef100_Q4UB41 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
RepID=Q4UB41_THEAN
Length = 1244
Score = 57.8 bits (138), Expect = 4e-07
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = -2
Query: 358 QVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
++C SCG +GY N+ C C+N + ++ + LPYACKLL QELQ+MNI P L
Sbjct: 1192 EICTSCGFMGYNNF------CKFCQN-NSLAQVSLPYACKLLFQELQAMNIRPSL 1239
[216][TOP]
>UniRef100_Q4DWA6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Trypanosoma cruzi
RepID=Q4DWA6_TRYCR
Length = 382
Score = 57.8 bits (138), Expect = 4e-07
Identities = 28/55 (50%), Positives = 34/55 (61%)
Frame = -2
Query: 352 CRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKL 188
CRSCG LGY Y CP C + +S++ +PYA KLL+QELQ M I RL L
Sbjct: 328 CRSCGFLGYCGY------CPYCNTKNTVSHVNVPYAFKLLLQELQGMGISTRLSL 376
[217][TOP]
>UniRef100_Q4D9P5 DNA-directed RNA polymerase n=1 Tax=Trypanosoma cruzi
RepID=Q4D9P5_TRYCR
Length = 1130
Score = 57.8 bits (138), Expect = 4e-07
Identities = 28/55 (50%), Positives = 34/55 (61%)
Frame = -2
Query: 352 CRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKL 188
CRSCG LGY Y CP C + +S++ +PYA KLL+QELQ M I RL L
Sbjct: 1076 CRSCGFLGYCGY------CPYCNTKNTVSHVNVPYAFKLLLQELQGMGISTRLSL 1124
[218][TOP]
>UniRef100_Q236N3 DNA-directed RNA polymerase n=1 Tax=Tetrahymena thermophila SB210
RepID=Q236N3_TETTH
Length = 1141
Score = 57.8 bits (138), Expect = 4e-07
Identities = 31/71 (43%), Positives = 42/71 (59%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ F QVC CG + + T C C+ DQ+S + +PYACKLL QEL S
Sbjct: 1072 RLMISSDKFS-VQVCEKCGFIQH------TNSCKMCQT-DQVSKVVMPYACKLLFQELLS 1123
Query: 214 MNIVPRLKLAD 182
MNI P+L L D
Sbjct: 1124 MNIKPKLNLVD 1134
[219][TOP]
>UniRef100_B4QC69 DNA-directed RNA polymerase n=2 Tax=melanogaster subgroup
RepID=B4QC69_DROSI
Length = 1137
Score = 57.8 bits (138), Expect = 4e-07
Identities = 27/69 (39%), Positives = 44/69 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VCR+CG + Y ++ C C++ +S + +PYACKLL QEL S
Sbjct: 1073 RLMISSDAFE-VDVCRTCGRMAYCSW------CHFCQSSANVSKISMPYACKLLFQELTS 1125
Query: 214 MNIVPRLKL 188
MN+VP++ L
Sbjct: 1126 MNVVPKMIL 1134
[220][TOP]
>UniRef100_B3LB54 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
RepID=B3LB54_PLAKH
Length = 1401
Score = 57.8 bits (138), Expect = 4e-07
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
+C CG++GY Y C C+ D+ + +K+PYACKLL QELQ+MN+ P++
Sbjct: 1349 ICEDCGMMGYDTY------CTFCQKCDKNALVKMPYACKLLFQELQTMNVFPKI 1396
[221][TOP]
>UniRef100_A5K0G6 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
RepID=A5K0G6_PLAVI
Length = 1427
Score = 57.8 bits (138), Expect = 4e-07
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
+C CG++GY Y C C+ D+ + +K+PYACKLL QELQ+MN+ P++
Sbjct: 1375 ICEDCGMMGYDTY------CTFCQKCDKNALVKMPYACKLLFQELQTMNVFPKI 1422
[222][TOP]
>UniRef100_Q2GW04 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2GW04_CHAGB
Length = 1155
Score = 57.8 bits (138), Expect = 4e-07
Identities = 27/58 (46%), Positives = 37/58 (63%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
+C CGLLGY G C +C + Q++ M +PYA KLL+QEL SMN+ R++L D
Sbjct: 1098 ICELCGLLGY------KGFCQTCGSTSQVTQMTMPYAAKLLVQELISMNVGVRMQLED 1149
[223][TOP]
>UniRef100_B6K5Q5 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6K5Q5_SCHJY
Length = 1210
Score = 57.8 bits (138), Expect = 4e-07
Identities = 27/54 (50%), Positives = 35/54 (64%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
VC CGL+ +++ + C SC+N + S + LPYA KLL QEL SMNI PRL
Sbjct: 1151 VCDLCGLIAIASFKKNSYECRSCQNRTRFSQIYLPYAAKLLFQELMSMNIAPRL 1204
[224][TOP]
>UniRef100_P25167 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Drosophila
melanogaster RepID=RPC2_DROME
Length = 1137
Score = 57.8 bits (138), Expect = 4e-07
Identities = 27/69 (39%), Positives = 44/69 (63%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F VCR+CG + Y ++ C C++ +S + +PYACKLL QEL S
Sbjct: 1073 RLMISSDAFE-VDVCRTCGRMAYCSW------CHFCQSSANVSKISMPYACKLLFQELTS 1125
Query: 214 MNIVPRLKL 188
MN+VP++ L
Sbjct: 1126 MNVVPKMIL 1134
[225][TOP]
>UniRef100_Q0DQ04 DNA-directed RNA polymerase (Fragment) n=1 Tax=Oryza sativa
Japonica Group RepID=Q0DQ04_ORYSJ
Length = 368
Score = 57.4 bits (137), Expect = 5e-07
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CGL+ N + + C CKN I + +PYACKLL QEL +M I PR+ D
Sbjct: 301 VCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTQD 358
[226][TOP]
>UniRef100_B9FA12 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FA12_ORYSJ
Length = 1218
Score = 57.4 bits (137), Expect = 5e-07
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CGL+ N + + C CKN I + +PYACKLL QEL +M I PR+ D
Sbjct: 1151 VCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTQD 1208
[227][TOP]
>UniRef100_Q10G20 DNA-directed RNA polymerase n=2 Tax=Oryza sativa RepID=Q10G20_ORYSJ
Length = 1222
Score = 57.4 bits (137), Expect = 5e-07
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CGL+ N + + C CKN I + +PYACKLL QEL +M I PR+ D
Sbjct: 1155 VCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTQD 1212
[228][TOP]
>UniRef100_Q27826 DNA-directed RNA polymerase n=1 Tax=Euplotes octocarinatus
RepID=Q27826_EUPOC
Length = 1194
Score = 57.4 bits (137), Expect = 5e-07
Identities = 26/54 (48%), Positives = 33/54 (61%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
VCR CGL+ N + +C C+N I + LPYACKLL QEL +M I PR+
Sbjct: 1136 VCRICGLICEANLRQQKYLCRGCQNSTNICQVGLPYACKLLFQELMAMQIAPRM 1189
[229][TOP]
>UniRef100_Q4PBR7 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
RepID=Q4PBR7_USTMA
Length = 1169
Score = 57.4 bits (137), Expect = 5e-07
Identities = 26/71 (36%), Positives = 41/71 (57%)
Frame = -2
Query: 394 RIKVANYSFPFTQVCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQS 215
R+ +++ +F C+ CGL+GY G CP C + + + +PY KL++QEL +
Sbjct: 1104 RLMISSDAFT-VHACQKCGLMGY------NGFCPYCSSSKHVVQLTIPYGTKLMLQELMA 1156
Query: 214 MNIVPRLKLAD 182
M +VPRL L D
Sbjct: 1157 MQVVPRLVLED 1167
[230][TOP]
>UniRef100_C9SKJ8 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SKJ8_9PEZI
Length = 1105
Score = 57.4 bits (137), Expect = 5e-07
Identities = 25/58 (43%), Positives = 38/58 (65%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
+C+ CGL GY Y C +C++ +++ M +PYA KLL+QEL SMN+ RL++ D
Sbjct: 1047 ICQQCGLFGYKGY------CHTCRSTKEVTKMTMPYAAKLLVQELISMNVGVRLQMED 1098
[231][TOP]
>UniRef100_A9A459 DNA-directed RNA polymerase n=1 Tax=Nitrosopumilus maritimus SCM1
RepID=A9A459_NITMS
Length = 1115
Score = 57.4 bits (137), Expect = 5e-07
Identities = 24/60 (40%), Positives = 41/60 (68%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLADPL 176
VC CGL+ Y++ + + VC C + ++S++ + YA KLL+QE+QS+N+ PRL + + L
Sbjct: 1056 VCERCGLVAYHDVKQRKYVCRVCGDKAKVSSVSVAYAFKLLLQEMQSLNVAPRLLIKEKL 1115
[232][TOP]
>UniRef100_Q1L5Z0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nicotiana sylvestris
RepID=Q1L5Z0_NICSY
Length = 1087
Score = 57.0 bits (136), Expect = 7e-07
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CGL+ N + + C CKN I + +PYACKLL QEL +M I PR+ D
Sbjct: 1025 VCERCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKD 1082
[233][TOP]
>UniRef100_Q1L5Y9 DNA-directed RNA polymerase n=1 Tax=Petunia x hybrida
RepID=Q1L5Y9_PETHY
Length = 1195
Score = 57.0 bits (136), Expect = 7e-07
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CGL+ N + + C CKN I + +PYACKLL QEL +M I PR+ D
Sbjct: 1126 VCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKD 1183
[234][TOP]
>UniRef100_Q1ANF2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spirogyra sp. UWCC
FW670 RepID=Q1ANF2_9VIRI
Length = 670
Score = 57.0 bits (136), Expect = 7e-07
Identities = 27/58 (46%), Positives = 32/58 (55%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CGL+ N + C CKN I + +PYACKLL QEL SM I PR+ D
Sbjct: 606 VCEHCGLIANANLKKSFFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMMTRD 663
[235][TOP]
>UniRef100_C5WR62 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5WR62_SORBI
Length = 1218
Score = 57.0 bits (136), Expect = 7e-07
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CGL+ N + + C CKN I + +PYACKLL QEL +M I PR+ D
Sbjct: 1151 VCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTHD 1208
[236][TOP]
>UniRef100_C0PI96 DNA-directed RNA polymerase n=1 Tax=Zea mays RepID=C0PI96_MAIZE
Length = 362
Score = 57.0 bits (136), Expect = 7e-07
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CGL+ N + + C CKN I + +PYACKLL QEL +M I PR+ D
Sbjct: 295 VCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTHD 352
[237][TOP]
>UniRef100_B9RZ91 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9RZ91_RICCO
Length = 1194
Score = 57.0 bits (136), Expect = 7e-07
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CGL+ N + + C CKN I + +PYACKLL QEL +M I PR+ D
Sbjct: 1125 VCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKD 1182
[238][TOP]
>UniRef100_B9H2V3 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9H2V3_POPTR
Length = 421
Score = 57.0 bits (136), Expect = 7e-07
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CGL+ N + + C CKN I + +PYACKLL QEL +M I PR+ D
Sbjct: 352 VCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKD 409
[239][TOP]
>UniRef100_Q4Q6P8 DNA-directed RNA polymerase n=1 Tax=Leishmania major
RepID=Q4Q6P8_LEIMA
Length = 1185
Score = 57.0 bits (136), Expect = 7e-07
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
VC CG + + +L C C+N +IS + +PYACKLL QEL SM I+PRL
Sbjct: 1127 VCNMCGTICVADTKLNRYQCKGCENDTRISQVLMPYACKLLFQELMSMTILPRL 1180
[240][TOP]
>UniRef100_A8B2N4 DNA-directed RNA polymerase n=1 Tax=Giardia lamblia ATCC 50803
RepID=A8B2N4_GIALA
Length = 1238
Score = 57.0 bits (136), Expect = 7e-07
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGV--CPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC +CGL Y K GV CP+C++G + +++PYA KL+IQEL SM ++ R++L D
Sbjct: 1181 VCETCGLFSYE----KNGVLWCPTCQSGKDVVKIRIPYAAKLMIQELISMGVLVRMQLED 1236
[241][TOP]
>UniRef100_A4I6A8 DNA-directed RNA polymerase n=1 Tax=Leishmania infantum
RepID=A4I6A8_LEIIN
Length = 1181
Score = 57.0 bits (136), Expect = 7e-07
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
VC CG + + +L C C+N +IS + +PYACKLL QEL SM I+PRL
Sbjct: 1123 VCNMCGTICVADTKLNRYQCKGCENDTRISQVLMPYACKLLFQELMSMTILPRL 1176
[242][TOP]
>UniRef100_A4HIZ1 DNA-directed RNA polymerase n=1 Tax=Leishmania braziliensis
RepID=A4HIZ1_LEIBR
Length = 1185
Score = 57.0 bits (136), Expect = 7e-07
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
VC CG + + +L C C+N +IS + +PYACKLL QEL SM I+PRL
Sbjct: 1127 VCNHCGTICVADTKLNRYQCKGCENDTRISQVLMPYACKLLFQELMSMTILPRL 1180
[243][TOP]
>UniRef100_Q42877 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Solanum
lycopersicum RepID=RPB2_SOLLC
Length = 1191
Score = 57.0 bits (136), Expect = 7e-07
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 182
VC CGL+ N + + C CKN I + +PYACKLL QEL +M I PR+ D
Sbjct: 1122 VCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKD 1179
[244][TOP]
>UniRef100_UPI000187D24D hypothetical protein MPER_10509 n=1 Tax=Moniliophthora perniciosa
FA553 RepID=UPI000187D24D
Length = 250
Score = 56.6 bits (135), Expect = 9e-07
Identities = 28/54 (51%), Positives = 33/54 (61%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
VC CGL N + + C +CKN IS + +PYA KLL QELQSMNI RL
Sbjct: 187 VCDICGLTAIANLKKQNFECRACKNKTAISQLYIPYAAKLLFQELQSMNIAARL 240
[245][TOP]
>UniRef100_Q1L5Z1 DNA-directed RNA polymerase n=1 Tax=Solanum lycopersicum
RepID=Q1L5Z1_SOLLC
Length = 1205
Score = 56.6 bits (135), Expect = 9e-07
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
VC+ CGL+ N + + C SC+N + +PYACKLLIQEL SM I PR+
Sbjct: 1141 VCQQCGLMAIANLKKMSFECRSCRNKTDNVQVYIPYACKLLIQELMSMAIAPRM 1194
[246][TOP]
>UniRef100_Q1ANF0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coleochaete scutata
RepID=Q1ANF0_COLSC
Length = 702
Score = 56.6 bits (135), Expect = 9e-07
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
VC CGL+ N + T C CKN I + +PYACKLL QEL +M I PR+
Sbjct: 610 VCEICGLIAIANLKKGTFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM 663
[247][TOP]
>UniRef100_P38420 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Arabidopsis
thaliana RepID=RPB2_ARATH
Length = 1188
Score = 56.6 bits (135), Expect = 9e-07
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
VC CGL+ N + + C CKN I + +PYACKLL QEL SM I PR+
Sbjct: 1123 VCEVCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYACKLLFQELMSMAIAPRM 1176
[248][TOP]
>UniRef100_A7PJ31 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7PJ31_VITVI
Length = 1220
Score = 56.2 bits (134), Expect = 1e-06
Identities = 25/54 (46%), Positives = 32/54 (59%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
VC CGL+ N + + C CKN I + +PYACKLL QEL +M I PR+
Sbjct: 1151 VCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM 1204
[249][TOP]
>UniRef100_A5C1N0 DNA-directed RNA polymerase n=2 Tax=Vitis RepID=A5C1N0_VITVI
Length = 1193
Score = 56.2 bits (134), Expect = 1e-06
Identities = 25/54 (46%), Positives = 32/54 (59%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRL 194
VC CGL+ N + + C CKN I + +PYACKLL QEL +M I PR+
Sbjct: 1124 VCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM 1177
[250][TOP]
>UniRef100_Q963D7 RNA polymerase II subunit 2 (Fragment) n=1 Tax=Blepharisma
japonicum RepID=Q963D7_BLEJA
Length = 203
Score = 56.2 bits (134), Expect = 1e-06
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = -2
Query: 355 VCRSCGLLGYYNYELKTGVCPSCKNGD-QISNMKLPYACKLLIQELQSMNIVPRL 194
VC +CGL N + C CKN + +IS + +PYACKLL QEL +M+I PRL
Sbjct: 144 VCENCGLFAIANLDRNMFQCKQCKNKNTRISQIFIPYACKLLFQELMAMHIAPRL 198