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[1][TOP]
>UniRef100_B9IEP4 Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9IEP4_POPTR
Length = 1110
Score = 201 bits (510), Expect = 3e-50
Identities = 92/143 (64%), Positives = 118/143 (82%)
Frame = -3
Query: 519 EKLAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRAS 340
+K+AE YD +LE FE FL AS ++E Y EKM+ LM +YGA+TEDE+LTGNL++R +
Sbjct: 966 KKIAEATYDQDLEVKGFEDFLGIASIYKEKYMEKMSTLMDYYGAKTEDEILTGNLRHRPT 1025
Query: 339 YLQRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYHES 160
YLQRDNR+Y D+KDRIL+S+K+L++EAKEWFE+ C E+Q MASAWYHVTYHP Y+HE
Sbjct: 1026 YLQRDNRKYGDVKDRILVSLKNLKKEAKEWFESSCNPTEHQCMASAWYHVTYHPTYFHER 1085
Query: 159 SSFLSFPWIVGDILLHIKSVNSK 91
+ LSFPWIVGDILL+IKS+NS+
Sbjct: 1086 MNCLSFPWIVGDILLNIKSLNSR 1108
[2][TOP]
>UniRef100_B9RB56 RNA-dependent RNA polymerase, putative n=1 Tax=Ricinus communis
RepID=B9RB56_RICCO
Length = 983
Score = 199 bits (507), Expect = 7e-50
Identities = 96/145 (66%), Positives = 113/145 (77%)
Frame = -3
Query: 519 EKLAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRAS 340
E +AE YD +LE FE F+E A SH++MY EK++ LM +Y A+ EDE+LTGNLQN+A
Sbjct: 821 ENIAEATYDHDLEVKGFEEFVEIAISHKDMYVEKLSGLMDYYEAKKEDEILTGNLQNKAM 880
Query: 339 YLQRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYHES 160
YLQRDNRRY D KDRILISVK LQ+EAKEWFE+ CQ E Q +ASAWYHVTYHP Y+ E
Sbjct: 881 YLQRDNRRYGDTKDRILISVKSLQKEAKEWFESCCQAKEKQRLASAWYHVTYHPSYFQEG 940
Query: 159 SSFLSFPWIVGDILLHIKSVNSKVL 85
+ LSFPWIV DILL+IKS NSK L
Sbjct: 941 ITCLSFPWIVADILLNIKSANSKNL 965
[3][TOP]
>UniRef100_A7PD40 Chromosome chr17 scaffold_12, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PD40_VITVI
Length = 1127
Score = 196 bits (499), Expect = 6e-49
Identities = 91/137 (66%), Positives = 111/137 (81%)
Frame = -3
Query: 501 AYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDN 322
AYD +LE + FE FLE A H+EMYAEKM LM FYGAE+EDE+LTGNL+N+ YLQRDN
Sbjct: 977 AYDHDLEVDGFETFLEIAKLHKEMYAEKMATLMNFYGAESEDEMLTGNLRNKLMYLQRDN 1036
Query: 321 RRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYHESSSFLSF 142
RR+T+MKDRILISVK LQ+EAKEW C+ H++Q MASAWYHVTYH + ++ +FLSF
Sbjct: 1037 RRFTEMKDRILISVKSLQKEAKEWLYGSCKPHQHQKMASAWYHVTYHSTFSSQTPNFLSF 1096
Query: 141 PWIVGDILLHIKSVNSK 91
PWIVG++LL IKS NS+
Sbjct: 1097 PWIVGEVLLVIKSANSR 1113
[4][TOP]
>UniRef100_Q647I4 Putative RNA-dependent RNA polymerase RdRP2 n=1 Tax=Nicotiana
benthamiana RepID=Q647I4_NICBE
Length = 1120
Score = 170 bits (430), Expect = 6e-41
Identities = 76/142 (53%), Positives = 107/142 (75%)
Frame = -3
Query: 507 EDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQR 328
+DAYD L + +E F+ETA +H+E Y ++M +L+ +YGAE E E+LTGNL+ ++ YLQR
Sbjct: 978 QDAYDHALLFDGYEAFIETAKNHKETYLDRMNSLLNYYGAEKEVEILTGNLRQKSVYLQR 1037
Query: 327 DNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYHESSSFL 148
DNRRY ++KDRIL+S K LQ+E K WF C++ E++ +ASAWYHVTYHP Y S++ L
Sbjct: 1038 DNRRYFELKDRILVSAKSLQKEVKGWFTGCCKEDEHKKLASAWYHVTYHPSYCEGSANCL 1097
Query: 147 SFPWIVGDILLHIKSVNSKVLS 82
FPW+VGDILL IK N++ ++
Sbjct: 1098 GFPWVVGDILLDIKLHNTRKIT 1119
[5][TOP]
>UniRef100_O82504 F2P3.11 protein n=1 Tax=Arabidopsis thaliana RepID=O82504_ARATH
Length = 1133
Score = 167 bits (423), Expect = 4e-40
Identities = 78/138 (56%), Positives = 105/138 (76%), Gaps = 1/138 (0%)
Frame = -3
Query: 501 AYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDN 322
AYD+ LE FE F+ETA +H++MY EK+T+LM +YGA E+E+LTG L+ + YL RDN
Sbjct: 982 AYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAANEEEILTGILKTKEMYLARDN 1041
Query: 321 RRYTDMKDRILISVKDLQREAKEWFEADCQ-QHEYQAMASAWYHVTYHPKYYHESSSFLS 145
RRY DMKDRI +SVKDL +EA WFE C+ + + + +ASAWY+VTY+P + E +FLS
Sbjct: 1042 RRYGDMKDRITLSVKDLHKEAMGWFEKSCEDEQQKKKLASAWYYVTYNPNHRDEKLTFLS 1101
Query: 144 FPWIVGDILLHIKSVNSK 91
FPWIVGD+LL IK+ N++
Sbjct: 1102 FPWIVGDVLLDIKAENAQ 1119
[6][TOP]
>UniRef100_Q19VG2 RNA-dependent RNA polymerase n=1 Tax=Zea mays RepID=Q19VG2_MAIZE
Length = 1127
Score = 135 bits (340), Expect = 2e-30
Identities = 67/132 (50%), Positives = 89/132 (67%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD +LE F+ FL+ A E YAE++ ALM +Y AE EDE+LTGN++N+ YL+RDN+
Sbjct: 978 YDPDLEVAGFDEFLDAAEERYEAYAERLGALMTYYSAEREDEILTGNIRNKLVYLRRDNK 1037
Query: 318 RYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYHESSSFLSFP 139
RY +MKDRI+ +V L E + W A C++ + +ASAWYHVTYHP E F SFP
Sbjct: 1038 RYFEMKDRIIAAVDALHAEVRGWLRA-CKEDDASRVASAWYHVTYHPDRRGE-KRFWSFP 1095
Query: 138 WIVGDILLHIKS 103
WI+ D LL IK+
Sbjct: 1096 WIICDTLLAIKA 1107
[7][TOP]
>UniRef100_C4JBQ0 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C4JBQ0_MAIZE
Length = 525
Score = 135 bits (340), Expect = 2e-30
Identities = 67/132 (50%), Positives = 89/132 (67%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD +LE F+ FL+ A E YAE++ ALM +Y AE EDE+LTGN++N+ YL+RDN+
Sbjct: 376 YDPDLEVAGFDEFLDAAEERYEAYAERLGALMTYYSAEREDEILTGNIRNKLVYLRRDNK 435
Query: 318 RYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYHESSSFLSFP 139
RY +MKDRI+ +V L E + W A C++ + +ASAWYHVTYHP E F SFP
Sbjct: 436 RYFEMKDRIIAAVDALHAEVRGWLRA-CKEDDASRVASAWYHVTYHPDRRGE-KRFWSFP 493
Query: 138 WIVGDILLHIKS 103
WI+ D LL IK+
Sbjct: 494 WIICDTLLAIKA 505
[8][TOP]
>UniRef100_B9FFL3 Putative uncharacterized protein n=2 Tax=Oryza sativa Japonica
Group RepID=B9FFL3_ORYSJ
Length = 335
Score = 132 bits (331), Expect = 2e-29
Identities = 65/132 (49%), Positives = 87/132 (65%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD +LE + FL+ A + E+Y EK+T LM +Y AE EDE+LTGN++N+ YL+RDN+
Sbjct: 181 YDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAELEDEILTGNIRNKMLYLKRDNK 240
Query: 318 RYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYHESSSFLSFP 139
RY +MKDRI+ +V L REA+ W + ++ + MASAWY VTYHP F SFP
Sbjct: 241 RYFEMKDRIVAAVDALHREARGWLLSSRKEEDASRMASAWYRVTYHPD-RRRGKRFWSFP 299
Query: 138 WIVGDILLHIKS 103
WI D LL IK+
Sbjct: 300 WIACDNLLAIKA 311
[9][TOP]
>UniRef100_C5YA80 Putative uncharacterized protein Sb06g019330 n=1 Tax=Sorghum bicolor
RepID=C5YA80_SORBI
Length = 1128
Score = 132 bits (331), Expect = 2e-29
Identities = 66/132 (50%), Positives = 88/132 (66%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD +LE F+ FL+TA E+YAEK+ LM +Y AE EDE+LTGN++N+ YL+RDN+
Sbjct: 979 YDPDLEVAGFDKFLDTAEEQYEVYAEKLGTLMTYYSAEHEDEILTGNIRNKLVYLRRDNK 1038
Query: 318 RYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYHESSSFLSFP 139
RY +MKDRI+ +V L E + W A ++ + +ASAWYHVTYHP E F SFP
Sbjct: 1039 RYFEMKDRIIAAVDALHAEVRGWLRAR-KEDDASKLASAWYHVTYHPDRRGE-KRFWSFP 1096
Query: 138 WIVGDILLHIKS 103
W+ D LL IK+
Sbjct: 1097 WVACDTLLAIKA 1108
[10][TOP]
>UniRef100_Q7XM31 Probable RNA-dependent RNA polymerase 2 n=1 Tax=Oryza sativa Japonica
Group RepID=RDR2_ORYSJ
Length = 1136
Score = 132 bits (331), Expect = 2e-29
Identities = 65/132 (49%), Positives = 87/132 (65%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD +LE + FL+ A + E+Y EK+T LM +Y AE EDE+LTGN++N+ YL+RDN+
Sbjct: 982 YDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAELEDEILTGNIRNKMLYLKRDNK 1041
Query: 318 RYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYHESSSFLSFP 139
RY +MKDRI+ +V L REA+ W + ++ + MASAWY VTYHP F SFP
Sbjct: 1042 RYFEMKDRIVAAVDALHREARGWLLSSRKEEDASRMASAWYRVTYHPD-RRRGKRFWSFP 1100
Query: 138 WIVGDILLHIKS 103
WI D LL IK+
Sbjct: 1101 WIACDNLLAIKA 1112
[11][TOP]
>UniRef100_A2XUF4 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2XUF4_ORYSI
Length = 1136
Score = 131 bits (330), Expect = 2e-29
Identities = 65/132 (49%), Positives = 87/132 (65%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD +LE + FL+ A + E+Y EK+T LM +Y AE EDE+LTGN++N+ YL+RDN+
Sbjct: 982 YDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAEHEDEILTGNIRNKMLYLKRDNK 1041
Query: 318 RYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYHESSSFLSFP 139
RY +MKDRI+ +V L REA+ W + ++ + MASAWY VTYHP F SFP
Sbjct: 1042 RYFEMKDRIVAAVDALHREARGWLLSSRKEEDASRMASAWYRVTYHPD-RRRGKRFWSFP 1100
Query: 138 WIVGDILLHIKS 103
WI D LL IK+
Sbjct: 1101 WIACDNLLAIKA 1112
[12][TOP]
>UniRef100_A7P3W5 Chromosome chr1 scaffold_5, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7P3W5_VITVI
Length = 1121
Score = 95.9 bits (237), Expect = 1e-18
Identities = 55/147 (37%), Positives = 81/147 (55%), Gaps = 11/147 (7%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +YD ++E FE ++ A ++ Y K+ LM +YG +TE E+L+G++ +
Sbjct: 955 VARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSGSIMRMSKSF 1014
Query: 333 QRDNRRYTDMKDRILISVKDLQREAKEWF-----EADCQQHEYQAMASAWYHVTYHPKY- 172
R + I ++VK L++EA+ WF E D + + A ASAWYHVTYHP Y
Sbjct: 1015 DRRKD-----AEAIGLAVKSLRKEARTWFNKMGSETDSEADDVYAKASAWYHVTYHPDYW 1069
Query: 171 --YHES---SSFLSFPWIVGDILLHIK 106
Y+E FLSFPW V D L+H K
Sbjct: 1070 GCYNEGMDRDHFLSFPWCVYDKLIHTK 1096
[13][TOP]
>UniRef100_A5AM83 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5AM83_VITVI
Length = 654
Score = 95.9 bits (237), Expect = 1e-18
Identities = 55/147 (37%), Positives = 81/147 (55%), Gaps = 11/147 (7%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +YD ++E FE ++ A ++ Y K+ LM +YG +TE E+L+G++ +
Sbjct: 488 VARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSGSIMRMSKSF 547
Query: 333 QRDNRRYTDMKDRILISVKDLQREAKEWF-----EADCQQHEYQAMASAWYHVTYHPKY- 172
R + I ++VK L++EA+ WF E D + + A ASAWYHVTYHP Y
Sbjct: 548 DRRKD-----AEAIGLAVKSLRKEARTWFNKMGSETDSEADDVYAKASAWYHVTYHPDYW 602
Query: 171 --YHES---SSFLSFPWIVGDILLHIK 106
Y+E FLSFPW V D L+H K
Sbjct: 603 GCYNEGMDRDHFLSFPWCVYDKLIHTK 629
[14][TOP]
>UniRef100_B9HJH7 Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9HJH7_POPTR
Length = 1133
Score = 94.7 bits (234), Expect = 3e-18
Identities = 57/153 (37%), Positives = 87/153 (56%), Gaps = 13/153 (8%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A YD ++E + FE +++ A ++ Y K+ LM++YG +TE ELL+G+
Sbjct: 965 VARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGS-------F 1017
Query: 333 QRDNRRYTDMKD--RILISVKDLQREAKEWFE-----ADCQQHEYQAMASAWYHVTYHPK 175
+ ++ +T +D I ++V+ L++EA+ WF D Q + A ASAWYHVTYH
Sbjct: 1018 MKMSKSFTKKRDAEAIGMAVRSLKKEARSWFNEKGSGLDSQADDVDAKASAWYHVTYHHN 1077
Query: 174 Y---YHESSS---FLSFPWIVGDILLHIKSVNS 94
Y Y+E + FLSFPW V D L+ IK NS
Sbjct: 1078 YWGCYNEGMNRDHFLSFPWCVYDKLIQIKRRNS 1110
[15][TOP]
>UniRef100_Q6L3W8 RNA-directed RNA polymerase, putative n=1 Tax=Solanum demissum
RepID=Q6L3W8_SOLDE
Length = 1139
Score = 94.0 bits (232), Expect = 6e-18
Identities = 53/153 (34%), Positives = 85/153 (55%), Gaps = 9/153 (5%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +YD++LE + FE +++ A ++ Y K+ LM +YG +TE E+L+G + +
Sbjct: 977 VARRSYDVDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKTSKTF 1036
Query: 333 QRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYH---- 166
R + I I+V+ L++EA+ WF+ + ASAWYHVTYHP Y+
Sbjct: 1037 DRRKDA-----EAISIAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQ 1091
Query: 165 --ESSSFLSFPWIVGDILLHI---KSVNSKVLS 82
+ F+SFPW V D L+ I K++N VL+
Sbjct: 1092 GLKRDHFISFPWCVYDQLIQIKKEKALNRPVLN 1124
[16][TOP]
>UniRef100_Q0KIK9 RNA-directed RNA polymerase, putative n=1 Tax=Solanum tuberosum
RepID=Q0KIK9_SOLTU
Length = 1050
Score = 94.0 bits (232), Expect = 6e-18
Identities = 50/147 (34%), Positives = 81/147 (55%), Gaps = 6/147 (4%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +YD +LE + FE +++ A ++ Y K+ LM++YG +TE E+L+G + +
Sbjct: 888 VARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKTSKTF 947
Query: 333 QRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYH---- 166
R + I I+V+ L++EA+ WF+ + ASAWYHVTYHP Y+
Sbjct: 948 DRRKDA-----EAISIAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQ 1002
Query: 165 --ESSSFLSFPWIVGDILLHIKSVNSK 91
+ F+SFPW V D L+ IK ++
Sbjct: 1003 GLKRDHFISFPWCVYDQLIQIKKEKAR 1029
[17][TOP]
>UniRef100_Q0KIR2 RNA dependent RNA polymerase family protein n=1 Tax=Solanum demissum
RepID=Q0KIR2_SOLDE
Length = 963
Score = 93.6 bits (231), Expect = 7e-18
Identities = 50/147 (34%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +YD +LE + FE +++ A ++ Y K+ LM +YG +TE E+L+G + +
Sbjct: 801 VARRSYDADLEVDGFEDYIDEAFDYKTEYDSKLGNLMDYYGIKTEAEILSGGIMKTSKTF 860
Query: 333 QRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYH---- 166
R + I I+V+ L++EA+ WF+ + ASAWYHVTYHP Y+
Sbjct: 861 DRRKDA-----EAISIAVRALRKEARTWFKRHNDIDDMLPKASAWYHVTYHPTYWGCYNQ 915
Query: 165 --ESSSFLSFPWIVGDILLHIKSVNSK 91
+ F+SFPW V D L+ IK ++
Sbjct: 916 GLKRDHFISFPWCVYDQLIQIKKEKAR 942
[18][TOP]
>UniRef100_Q6L3P3 RNA-directed RNA polymerase, putative n=1 Tax=Solanum demissum
RepID=Q6L3P3_SOLDE
Length = 1021
Score = 93.2 bits (230), Expect = 1e-17
Identities = 50/147 (34%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +YD +LE + FE +++ A ++ Y K+ LM +YG +TE E+L+G + +
Sbjct: 859 VARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKTSKTF 918
Query: 333 QRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYH---- 166
R + I I+V+ L++EA+ WF+ + ASAWYHVTYHP Y+
Sbjct: 919 DRRKDA-----EAISIAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQ 973
Query: 165 --ESSSFLSFPWIVGDILLHIKSVNSK 91
+ F+SFPW V D L+ IK ++
Sbjct: 974 GLKRDHFISFPWCVYDQLIQIKKEKAR 1000
[19][TOP]
>UniRef100_Q6L447 RNA-directed RNA polymerase-like, putative n=1 Tax=Solanum demissum
RepID=Q6L447_SOLDE
Length = 1137
Score = 92.8 bits (229), Expect = 1e-17
Identities = 50/146 (34%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Frame = -3
Query: 510 AEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQ 331
A +YD +LE + FE +++ A ++ Y K+ LM +YG +TE E+L+G + +
Sbjct: 976 ARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKTSKTFD 1035
Query: 330 RDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYH----- 166
R + I I+V+ L++EA+ WF+ + ASAWYHVTYHP Y+
Sbjct: 1036 RRKDA-----EAISIAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQG 1090
Query: 165 -ESSSFLSFPWIVGDILLHIKSVNSK 91
+ F+SFPW V D L+ IK ++
Sbjct: 1091 LKRDHFISFPWCVYDQLIQIKKEKAR 1116
[20][TOP]
>UniRef100_Q6L3V2 RNA dependent RNA polymerase family protein n=1 Tax=Solanum demissum
RepID=Q6L3V2_SOLDE
Length = 963
Score = 92.8 bits (229), Expect = 1e-17
Identities = 49/147 (33%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +YD +LE + FE +++ A ++ Y K+ LM +YG +TE E+L+G + +
Sbjct: 801 VARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTF 860
Query: 333 QRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYH---- 166
R + I ++V+ L++EA+ WF+ + ASAWYHVTYHP Y+
Sbjct: 861 DRRKDA-----EAISVAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQ 915
Query: 165 --ESSSFLSFPWIVGDILLHIKSVNSK 91
+ F+SFPW V D L+ IK ++
Sbjct: 916 GLKRDHFISFPWCVYDQLIQIKKEKAR 942
[21][TOP]
>UniRef100_Q6L3P6 RNA-directed RNA polymerase, putative n=1 Tax=Solanum demissum
RepID=Q6L3P6_SOLDE
Length = 1180
Score = 92.8 bits (229), Expect = 1e-17
Identities = 52/153 (33%), Positives = 84/153 (54%), Gaps = 9/153 (5%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +YD +LE + FE +++ A ++ Y K+ LM +YG +TE E+L+G + +
Sbjct: 1018 VARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTF 1077
Query: 333 QRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYH---- 166
R + I ++V+ L++EA+ WF+ + ASAWYHVTYHP Y+
Sbjct: 1078 DRRKDA-----EAISVAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQ 1132
Query: 165 --ESSSFLSFPWIVGDILLHI---KSVNSKVLS 82
+ F+SFPW V D L+ I K++N VL+
Sbjct: 1133 GLKRDHFISFPWCVYDQLIQIKKEKALNRPVLN 1165
[22][TOP]
>UniRef100_B3SND7 RNA-dependent RNA polymerase n=1 Tax=Gossypium hirsutum
RepID=B3SND7_GOSHI
Length = 1110
Score = 92.8 bits (229), Expect = 1e-17
Identities = 57/150 (38%), Positives = 82/150 (54%), Gaps = 13/150 (8%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD ++E FE +++ A H+ Y K+ LM +YG +TE E+L G + + R
Sbjct: 948 YDPDMEVEGFEDYIDDAFFHKSKYDYKLGNLMDYYGVKTEAEILGGGIMKMS-------R 1000
Query: 318 RYTDMKDRILIS--VKDLQREAKEWF-----EADCQQHEYQAMASAWYHVTYHPKY---Y 169
+T +D IS V+ L++EA+ WF E D + + A ASAWY+VTYHP Y Y
Sbjct: 1001 SFTKKRDAEAISMAVRSLRKEARSWFNEKGSELDEEIDDAYAKASAWYYVTYHPSYWGQY 1060
Query: 168 HESSS---FLSFPWIVGDILLHIKSVNSKV 88
+E + FLSFPW V D L+ IK + V
Sbjct: 1061 NEGMNRDHFLSFPWCVYDKLIQIKKEKAAV 1090
[23][TOP]
>UniRef100_A4UV17 Putative RNA-dependent RNA-polymerase n=1 Tax=Solanum tuberosum
RepID=A4UV17_SOLTU
Length = 1115
Score = 92.8 bits (229), Expect = 1e-17
Identities = 49/147 (33%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +YD +LE + FE +++ A ++ Y K+ LM +YG +TE E+L+G + +
Sbjct: 953 VARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTF 1012
Query: 333 QRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYH---- 166
R + I ++V+ L++EA+ WF+ + ASAWYHVTYHP Y+
Sbjct: 1013 DRRKDA-----EAISVAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQ 1067
Query: 165 --ESSSFLSFPWIVGDILLHIKSVNSK 91
+ F+SFPW V D L+ IK ++
Sbjct: 1068 GLKRDHFISFPWCVYDQLIQIKKEKAR 1094
[24][TOP]
>UniRef100_Q9ZR58 RNA-directed RNA polymerase n=1 Tax=Solanum lycopersicum
RepID=Q9ZR58_SOLLC
Length = 1114
Score = 92.0 bits (227), Expect = 2e-17
Identities = 48/142 (33%), Positives = 79/142 (55%), Gaps = 6/142 (4%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +YD ++E + FE +++ A ++ Y K+ LM +YG +TE E+L+G + +
Sbjct: 952 VARRSYDADMEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTF 1011
Query: 333 QRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYH---- 166
R + I ++V+ L++EA+ WF+ + ASAWYHVTYHP Y+
Sbjct: 1012 DRRKDA-----EAISVAVRALRKEARAWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQ 1066
Query: 165 --ESSSFLSFPWIVGDILLHIK 106
+ + F+SFPW V D L+ IK
Sbjct: 1067 GLKRAHFISFPWCVYDQLIQIK 1088
[25][TOP]
>UniRef100_C1I213 RNA-dependent RNA polymerase n=1 Tax=Nicotiana glutinosa
RepID=C1I213_NICGU
Length = 1117
Score = 91.7 bits (226), Expect = 3e-17
Identities = 50/147 (34%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +YD ++ N FE +++ A ++ Y K+ LM +YG +TE E+L+G + +
Sbjct: 955 VARKSYDGDMIVNGFEDYIDEAFYYKSEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTF 1014
Query: 333 QRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKY---YHE 163
R D I ++V+ L++EA+ WF+ + A ASAWYHVTYH Y Y+E
Sbjct: 1015 DRRKDA-----DAIGVAVRSLRKEARTWFKRRSDIDDMLAKASAWYHVTYHHTYWGFYNE 1069
Query: 162 S---SSFLSFPWIVGDILLHIKSVNSK 91
F+SFPW + D L+ IK ++
Sbjct: 1070 GLKRDHFISFPWCIYDQLIQIKKAKAR 1096
[26][TOP]
>UniRef100_Q9ZRX3 RNA-directed RNA polymerase (Fragment) n=1 Tax=Petunia x hybrida
RepID=Q9ZRX3_PETHY
Length = 775
Score = 89.7 bits (221), Expect = 1e-16
Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 6/136 (4%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +YD +LE + FE +++ A ++ Y +K+ LM +YG +TE E L+G + +
Sbjct: 645 VARRSYDTDLEVDGFEDYIDEAFDYKSEYDKKLGNLMDYYGIKTEAETLSGGIMKASKTF 704
Query: 333 QRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKY---YHE 163
D RR + I ++V+ L++EA+ WF+ + A ASAWYHV YHP Y Y+E
Sbjct: 705 --DRRRDAEA---IGVAVRSLRKEARTWFKRRSDIDDLLAKASAWYHVAYHPTYWGCYNE 759
Query: 162 S---SSFLSFPWIVGD 124
F+SFPW V D
Sbjct: 760 GLKRDHFISFPWCVYD 775
[27][TOP]
>UniRef100_A5ATA5 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5ATA5_VITVI
Length = 697
Score = 89.7 bits (221), Expect = 1e-16
Identities = 54/147 (36%), Positives = 81/147 (55%), Gaps = 11/147 (7%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +YD ++E + FE ++ A ++ Y K+ +LM YG TE E+L+G+L +
Sbjct: 497 VAMQSYDADMEVDGFEDYVRDAFYYKSQYDFKLGSLMDCYGIRTESEILSGSLMKMSKSF 556
Query: 333 QRDNRRYTDMKDRILISVKDLQREAKEWFE-----ADCQQHEYQAMASAWYHVTYHPKY- 172
D R+ + I ++V+ L++EA+ WF + A+ASAWYHVTYHP Y
Sbjct: 557 --DKRKDA---EAIALAVRSLRKEARTWFNKMGSGTYAGADDVYAIASAWYHVTYHPYYW 611
Query: 171 --YHES---SSFLSFPWIVGDILLHIK 106
Y+E FLSFPW V D L+ IK
Sbjct: 612 GCYNEGMYHDHFLSFPWCVYDKLIQIK 638
[28][TOP]
>UniRef100_B9HJH5 Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9HJH5_POPTR
Length = 1139
Score = 88.6 bits (218), Expect = 2e-16
Identities = 49/145 (33%), Positives = 85/145 (58%), Gaps = 7/145 (4%)
Frame = -3
Query: 519 EKLAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRAS 340
+++A +YD ++E + F+ ++ A ++ +Y K+ +M +YG +TE E+++G++
Sbjct: 973 KEMARRSYDPDMEVDGFQKHIDEAFHYKSVYDNKLGNMMDYYGIKTEAEIISGSIMKVGK 1032
Query: 339 YLQRDNRRYTDMKDRILISVKDLQREAKEWF-EADCQQHEYQAMASAWYHVTYHPKY--- 172
+ R + D I S++ L+++A+ WF E+D + A ASAWY+VTYHP Y
Sbjct: 1033 SFDK-KRDF----DSINYSIRSLRKQARAWFDESDNSPDDLYAKASAWYYVTYHPSYWGR 1087
Query: 171 YHESSS---FLSFPWIVGDILLHIK 106
Y+E + FLSFPW D L+ IK
Sbjct: 1088 YNEGMNRVHFLSFPWCFYDKLIDIK 1112
[29][TOP]
>UniRef100_Q9ZRY7 RNA-directed RNA polymerase n=1 Tax=Nicotiana tabacum
RepID=Q9ZRY7_TOBAC
Length = 1116
Score = 88.2 bits (217), Expect = 3e-16
Identities = 49/147 (33%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +YD ++ + FE +++ A ++ Y K+ LM +YG +TE E+L+G + +
Sbjct: 954 VARKSYDSDMIVDGFEDYIDEAFYYKSEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTF 1013
Query: 333 QRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKY---YHE 163
R + I ++V+ L++EA+ WF+ + A ASAWYHVTYH Y Y+E
Sbjct: 1014 DRRKDA-----EAIGVAVRCLRKEARAWFKRRSDIDDMLAKASAWYHVTYHHTYWGLYNE 1068
Query: 162 S---SSFLSFPWIVGDILLHIKSVNSK 91
F+SFPW V D L+ IK ++
Sbjct: 1069 GLKRDHFISFPWCVYDQLIQIKKAKAR 1095
[30][TOP]
>UniRef100_A9T7J6 RNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9T7J6_PHYPA
Length = 843
Score = 88.2 bits (217), Expect = 3e-16
Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 9/148 (6%)
Frame = -3
Query: 507 EDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQR 328
E A+D + +E F++ A H+ Y K+ LM YG ETE E ++G + N A ++
Sbjct: 697 ERAFDPVMVITGYEEFIDMAKFHKNEYDRKLIGLMNQYGIETEAEAVSGYMLNLA---RQ 753
Query: 327 DNRRYTDMKDRILISVKDLQREAKEWFEA---DCQQHEYQAMASAWYHVTYHPKYYHESS 157
+R D+ +RI +V+ L EA++ F+ D + A ASAWYHVTYHP++ S+
Sbjct: 754 YVKRREDVVERIRDAVRSLINEARQRFDENADDMVDDDIYAKASAWYHVTYHPEHIKVSA 813
Query: 156 S------FLSFPWIVGDILLHIKSVNSK 91
+ +SFPW++ ++LL IK +
Sbjct: 814 TGRREVHLISFPWVIYNVLLQIKKAGGR 841
[31][TOP]
>UniRef100_Q6RFH9 RNA-directed RNA polymerase 2 n=1 Tax=Hordeum vulgare subsp. vulgare
RepID=Q6RFH9_HORVD
Length = 1115
Score = 87.4 bits (215), Expect = 5e-16
Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 13/153 (8%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +YD +L + ++ ++ A + Y K+ LM+ YG ++E E+++G + A
Sbjct: 950 VARRSYDTDLIVDGYQDYITEAVWFKGEYDFKLGNLMEHYGIKSEAEIISGCILKMAKNF 1009
Query: 333 QRDNRRYTDMKDRILISVKDLQREAKEWFE-------ADCQQHEYQAMASAWYHVTYHPK 175
+ + D I ++VK L++EA+ WF D + Y A ASAWYHVTYHP+
Sbjct: 1010 TKSSDA-----DAIRLAVKSLRKEARSWFSDMSADESGDVHEASY-AKASAWYHVTYHPE 1063
Query: 174 YY------HESSSFLSFPWIVGDILLHIKSVNS 94
YY +E +SFPW V D LLHIK S
Sbjct: 1064 YYGCYNKIYERPHLISFPWCVYDKLLHIKQRKS 1096
[32][TOP]
>UniRef100_B5M059 RNA-directed RNA polymerase 1a (Fragment) n=1 Tax=Hordeum vulgare
RepID=B5M059_HORVU
Length = 1114
Score = 87.4 bits (215), Expect = 5e-16
Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 13/153 (8%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +YD +L + ++ ++ A + Y K+ LM+ YG ++E E+++G + A
Sbjct: 950 VARRSYDTDLIVDGYQDYITEAVWFKGEYDFKLGNLMEHYGIKSEAEIISGCILKMAKNF 1009
Query: 333 QRDNRRYTDMKDRILISVKDLQREAKEWFE-------ADCQQHEYQAMASAWYHVTYHPK 175
+ + D I ++VK L++EA+ WF D + Y A ASAWYHVTYHP+
Sbjct: 1010 TKSSDA-----DAIRLAVKSLRKEARSWFSDMSADESGDVHEASY-AKASAWYHVTYHPE 1063
Query: 174 YY------HESSSFLSFPWIVGDILLHIKSVNS 94
YY +E +SFPW V D LLHIK S
Sbjct: 1064 YYGCYNKIYERPHLISFPWCVYDKLLHIKQRKS 1096
[33][TOP]
>UniRef100_Q75ZN6 RNA-directed RNA Polymerase (Fragment) n=1 Tax=Vigna unguiculata
RepID=Q75ZN6_VIGUN
Length = 257
Score = 87.0 bits (214), Expect = 7e-16
Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 6/143 (4%)
Frame = -3
Query: 516 KLAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASY 337
++A +YD ++E + F +++ A H+ Y K+ LM +YG +TE E+L+GN+ +
Sbjct: 111 EVARTSYDFDMEVDGFLDYVDDAFYHKTNYDYKLGNLMDYYGIKTEAEILSGNIIKLSKC 170
Query: 336 LQRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKY---YH 166
+ RR + ++ +V L+++A+ WF + A ASAWYHVTYHP Y Y+
Sbjct: 171 FNK--RRDAEAINK---AVTSLRKDARSWFNEGNNGDDEYAKASAWYHVTYHPSYWGCYN 225
Query: 165 ES---SSFLSFPWIVGDILLHIK 106
+ +LSFPW V LL IK
Sbjct: 226 QGMGRDHYLSFPWCVFPQLLQIK 248
[34][TOP]
>UniRef100_A4UBI7 Putative RNA-directed RNA polymerase 1 n=1 Tax=Nicotiana attenuata
RepID=A4UBI7_9SOLA
Length = 1044
Score = 85.9 bits (211), Expect = 2e-15
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 6/147 (4%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +Y ++ N FE + + A ++ Y K+ LM +YG +TE E+L+G + +
Sbjct: 882 VARKSYAGDMIVNGFEDYTDEAFYYKSEYDNKLGNLMDYYGIKTEAEILSGGVMKASKTF 941
Query: 333 QRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKY---YHE 163
R + I ++V+ L++EA+ WF+ + A ASAWYHVTYH Y Y+E
Sbjct: 942 DRRKDA-----EAIGVAVRSLRKEARTWFKKRSDIDDMLAKASAWYHVTYHHTYWGLYNE 996
Query: 162 S---SSFLSFPWIVGDILLHIKSVNSK 91
F+SFPW V D L+ IK ++
Sbjct: 997 GLRRDHFISFPWCVYDQLIQIKKAKAR 1023
[35][TOP]
>UniRef100_UPI000198295F PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI000198295F
Length = 1109
Score = 85.5 bits (210), Expect = 2e-15
Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 11/147 (7%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +YD ++E + FE ++ A ++ Y K+ +LM G TE E+L+G++ +
Sbjct: 953 VAMQSYDADMEVDGFEDYVRDAFYYKSQYDFKLGSLMDCCGIRTESEILSGSIMKMSKSF 1012
Query: 333 QRDNRRYTDMKDRILISVKDLQREAKEWFE-----ADCQQHEYQAMASAWYHVTYHPKY- 172
D R+ + I ++V+ L++EA+ WF + A+ASAWYHVTYHP Y
Sbjct: 1013 --DKRKDAEA---IALAVRSLRKEARTWFNKMGSGTYAGADDVYAIASAWYHVTYHPYYW 1067
Query: 171 --YHES---SSFLSFPWIVGDILLHIK 106
Y+E FLSFPW V D L+ IK
Sbjct: 1068 GCYNEGMYHDHFLSFPWCVYDKLIQIK 1094
[36][TOP]
>UniRef100_A7P3W3 Chromosome chr1 scaffold_5, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7P3W3_VITVI
Length = 1076
Score = 85.5 bits (210), Expect = 2e-15
Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 11/147 (7%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +YD ++E + FE ++ A ++ Y K+ +LM G TE E+L+G++ +
Sbjct: 920 VAMQSYDADMEVDGFEDYVRDAFYYKSQYDFKLGSLMDCCGIRTESEILSGSIMKMSKSF 979
Query: 333 QRDNRRYTDMKDRILISVKDLQREAKEWFE-----ADCQQHEYQAMASAWYHVTYHPKY- 172
D R+ + I ++V+ L++EA+ WF + A+ASAWYHVTYHP Y
Sbjct: 980 --DKRKDAEA---IALAVRSLRKEARTWFNKMGSGTYAGADDVYAIASAWYHVTYHPYYW 1034
Query: 171 --YHES---SSFLSFPWIVGDILLHIK 106
Y+E FLSFPW V D L+ IK
Sbjct: 1035 GCYNEGMYHDHFLSFPWCVYDKLIQIK 1061
[37][TOP]
>UniRef100_B2B9K0 RNA-dependent RNA polymerase n=1 Tax=Gossypium hirsutum
RepID=B2B9K0_GOSHI
Length = 1110
Score = 84.7 bits (208), Expect = 3e-15
Identities = 52/144 (36%), Positives = 80/144 (55%), Gaps = 13/144 (9%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD ++E F +++ A ++ Y K+ LM +YG +TE E+L+G + + R
Sbjct: 948 YDPDMEVEGFVDYIDDAFFYKSKYDYKLGNLMDYYGVKTEAEILSGGIMKMS-------R 1000
Query: 318 RYTDMKDR--ILISVKDLQREAKEWF-----EADCQQHEYQAMASAWYHVTYHPKY---Y 169
+T +D I ++V+ L++EA+ WF E D + + A ASAWY+VTYH Y Y
Sbjct: 1001 SFTKKRDAESISMAVRSLRKEARSWFNEKGSELDEEIDDAYAKASAWYYVTYHHSYWGQY 1060
Query: 168 HESSS---FLSFPWIVGDILLHIK 106
+E + FLSFPW V D L+ IK
Sbjct: 1061 NEGMNRDHFLSFPWCVYDKLIQIK 1084
[38][TOP]
>UniRef100_Q9LQV2 F10B6.19 n=1 Tax=Arabidopsis thaliana RepID=Q9LQV2_ARATH
Length = 1107
Score = 84.0 bits (206), Expect = 6e-15
Identities = 52/147 (35%), Positives = 79/147 (53%), Gaps = 8/147 (5%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +YD ++E + FE +++ A + Y K+ LM +YG +TE E+L+G +
Sbjct: 948 VASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIM------ 1001
Query: 333 QRDNRRYTDMKDRILI--SVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKY---Y 169
R ++ +T +D I +V+ L++E F A ++ A ASAWYHVTYH Y Y
Sbjct: 1002 -RMSKSFTKRRDAESIGRAVRALRKETLSLFNASEEEENESAKASAWYHVTYHSSYWGLY 1060
Query: 168 HES---SSFLSFPWIVGDILLHIKSVN 97
+E FLSF W V D L+ IK N
Sbjct: 1061 NEGLNRDHFLSFAWCVYDKLVRIKKTN 1087
[39][TOP]
>UniRef100_Q8H1K9 RNA-dependent RNA polymerase 1 n=1 Tax=Arabidopsis thaliana
RepID=Q8H1K9_ARATH
Length = 1107
Score = 84.0 bits (206), Expect = 6e-15
Identities = 52/147 (35%), Positives = 79/147 (53%), Gaps = 8/147 (5%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +YD ++E + FE +++ A + Y K+ LM +YG +TE E+L+G +
Sbjct: 948 VASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIM------ 1001
Query: 333 QRDNRRYTDMKDRILI--SVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKY---Y 169
R ++ +T +D I +V+ L++E F A ++ A ASAWYHVTYH Y Y
Sbjct: 1002 -RMSKSFTKRRDAESIGRAVRALRKETLSLFNASEEEENESAKASAWYHVTYHSSYWGLY 1060
Query: 168 HES---SSFLSFPWIVGDILLHIKSVN 97
+E FLSF W V D L+ IK N
Sbjct: 1061 NEGLNRDHFLSFAWCVYDKLVRIKKTN 1087
[40][TOP]
>UniRef100_B9HVU2 Rna-dependent RNA polymerase (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9HVU2_POPTR
Length = 1102
Score = 82.0 bits (201), Expect = 2e-14
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Frame = -3
Query: 519 EKLAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRAS 340
++ A+ +YD ++E + F+ ++ A ++ Y K+ +M +YG +TE E++ G
Sbjct: 960 KEAAKRSYDPDMEVDGFKDYINEAFYYKSEYDNKLGNMMDYYGIKTEAEIIGG------- 1012
Query: 339 YLQRDNRRYTDMKD--RILISVKDLQREAKEWFEADCQQH---EYQAMASAWYHVTYHPK 175
+ R R + KD I SV L+++A+ WF + + ASAWYHVTYHP+
Sbjct: 1013 CIMRMGRSFDKKKDLEGINFSVSSLRKQARAWFNESGSKESPDDVYRKASAWYHVTYHPR 1072
Query: 174 Y---YHESSS---FLSFPWIVGDILLHIK 106
+ Y+E FLSFPW V D L IK
Sbjct: 1073 FWGLYNEGMDRVHFLSFPWCVHDKLFEIK 1101
[41][TOP]
>UniRef100_A4UV46 Putative RNA-dependent RNA-polymerase n=1 Tax=Solanum tuberosum
RepID=A4UV46_SOLTU
Length = 1065
Score = 79.7 bits (195), Expect = 1e-13
Identities = 40/115 (34%), Positives = 65/115 (56%)
Frame = -3
Query: 513 LAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 334
+A +YD +LE + FE +++ A ++ Y K+ LM +YG +TE E+L+G + +
Sbjct: 952 VARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKTSKTF 1011
Query: 333 QRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYY 169
R + I I+V+ L++EA+ WF+ + ASAWYHVTYHP Y+
Sbjct: 1012 DRRKDA-----EAISIAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYW 1061
[42][TOP]
>UniRef100_Q9SG02 Putative RNA-directed RNA polymerase; 73997-69985 n=1 Tax=Arabidopsis
thaliana RepID=Q9SG02_ARATH
Length = 1196
Score = 79.3 bits (194), Expect = 1e-13
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 21/152 (13%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD LE FE + A H+ +Y ++ L+ Y + E+E++TG++ + Y ++
Sbjct: 1022 YDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYT---SK 1078
Query: 318 RYTDMKDRILISVKDLQREAKEWFEADCQQHE----------YQAMASAWYHVTYHPKYY 169
+ ++K+R+ S L++E ++ FE HE Y+ ASAWYHVTYHP++
Sbjct: 1079 KQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWV 1138
Query: 168 HES-----------SSFLSFPWIVGDILLHIK 106
+S ++ LSF WI D L IK
Sbjct: 1139 KKSLELQDPDESSHAAMLSFAWIAADYLARIK 1170
[43][TOP]
>UniRef100_C7F747 Putative RNA-dependent RNA polymerase n=1 Tax=Zea mays
RepID=C7F747_MAIZE
Length = 1108
Score = 79.3 bits (194), Expect = 1e-13
Identities = 46/147 (31%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Frame = -3
Query: 516 KLAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASY 337
++A +YD +L + +E ++ A +E Y ++ LM YG ++E E+++G + A
Sbjct: 951 EVARRSYDTDLIVDGYEDYITEAIEFKEEYDFRLGNLMDHYGIKSEAEIISGCILKMAKN 1010
Query: 336 LQRDNRRYTDMKDRILISVKDLQREAKEWFE----ADCQQHEYQAMASAWYHVTYHPKYY 169
+ + D I ++V+ L++EA+ WF + Q +A ASAWYHVTYH +Y+
Sbjct: 1011 FTKSSDA-----DAIRMAVRSLRKEARSWFNEMSTGEDGQDAMEAKASAWYHVTYHQQYW 1065
Query: 168 ------HESSSFLSFPWIVGDILLHIK 106
++ +SFPW V D L+ IK
Sbjct: 1066 GSYNEGYDRPHLISFPWCVYDKLVAIK 1092
[44][TOP]
>UniRef100_C5XZ94 Putative uncharacterized protein Sb04g028630 n=1 Tax=Sorghum bicolor
RepID=C5XZ94_SORBI
Length = 1114
Score = 79.0 bits (193), Expect = 2e-13
Identities = 46/147 (31%), Positives = 80/147 (54%), Gaps = 10/147 (6%)
Frame = -3
Query: 516 KLAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASY 337
++A+ +YD +L + +E ++ A +E Y ++ LM YG ++E E+++G A
Sbjct: 951 EVAKRSYDTDLIVDGYEDYITEAIEFKEEYDFRLGNLMDHYGIKSEAEIISGCFLKMAKN 1010
Query: 336 LQRDNRRYTDMKDRILISVKDLQREAKEWFE----ADCQQHEYQAMASAWYHVTYHPKYY 169
+ + D I ++V+ L++EA+ WF ++ Q +A ASAWYHVTY P+Y+
Sbjct: 1011 FTKSSDA-----DAIRMAVRSLRKEARSWFNEMSTSEDDQDATEAKASAWYHVTYDPQYW 1065
Query: 168 ------HESSSFLSFPWIVGDILLHIK 106
++ +SFPW V D L+ IK
Sbjct: 1066 GNYNEGYDRPHLISFPWCVYDKLVIIK 1092
[45][TOP]
>UniRef100_Q9LKP0 RNA-dependent RNA polymerase n=1 Tax=Arabidopsis thaliana
RepID=Q9LKP0_ARATH
Length = 1196
Score = 78.2 bits (191), Expect = 3e-13
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 21/152 (13%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD LE FE + A H+ Y ++ L+ Y + E+E++TG++ + Y ++
Sbjct: 1022 YDAVLEIPGFEDLIPEAWGHKCSYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYT---SK 1078
Query: 318 RYTDMKDRILISVKDLQREAKEWFEADCQQHE----------YQAMASAWYHVTYHPKYY 169
+ ++K+R+ S L++E ++ FE HE Y+ ASAWYHVTYHP++
Sbjct: 1079 KQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWV 1138
Query: 168 HES-----------SSFLSFPWIVGDILLHIK 106
+S ++ LSF WI D L IK
Sbjct: 1139 KKSLELQDPDESSHAAMLSFAWIAADYLARIK 1170
[46][TOP]
>UniRef100_Q6RFI0 RNA-directed RNA polymerase 1 n=1 Tax=Hordeum vulgare subsp. vulgare
RepID=Q6RFI0_HORVD
Length = 1115
Score = 77.8 bits (190), Expect = 4e-13
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Frame = -3
Query: 501 AYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDN 322
+YD +L + ++ ++ A +E Y K+ LM+ YG +E E+++G + A + +
Sbjct: 953 SYDTDLIVDGYQDYITEAVWFKEEYDFKLGNLMEHYGINSEAEIISGCILKMAKNFTKKS 1012
Query: 321 RRYTDMKDRILISVKDLQREAKEWF------EADCQQHEYQAMASAWYHVTYHPKY---- 172
D I ++VK L++EA+ WF E+ A ASAWYHVTYHP+Y
Sbjct: 1013 DA-----DAIRLAVKSLRKEARSWFSEMGSDESGDGHKALVAKASAWYHVTYHPQYWGCY 1067
Query: 171 ---YHESSSFLSFPWIVGDILLHIK 106
Y +SFPW V D L+ IK
Sbjct: 1068 NEGYDHRPHLISFPWCVYDKLILIK 1092
[47][TOP]
>UniRef100_B5M060 RNA-directed RNA polymerase 1b n=1 Tax=Hordeum vulgare
RepID=B5M060_HORVU
Length = 1115
Score = 77.8 bits (190), Expect = 4e-13
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Frame = -3
Query: 501 AYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDN 322
+YD +L + ++ ++ A +E Y K+ LM+ YG +E E+++G + A + +
Sbjct: 953 SYDTDLIVDGYQDYITEAVWFKEEYDFKLGNLMEHYGINSEAEIISGCILKMAKNFTKKS 1012
Query: 321 RRYTDMKDRILISVKDLQREAKEWF------EADCQQHEYQAMASAWYHVTYHPKY---- 172
D I ++VK L++EA+ WF E+ A ASAWYHVTYHP+Y
Sbjct: 1013 DA-----DAIRLAVKSLRKEARSWFSEMGSDESGDGHKALVAKASAWYHVTYHPQYWGCY 1067
Query: 171 ---YHESSSFLSFPWIVGDILLHIK 106
Y +SFPW V D L+ IK
Sbjct: 1068 NKGYDHRPHLISFPWCVYDKLILIK 1092
[48][TOP]
>UniRef100_B9F2V8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group
RepID=B9F2V8_ORYSJ
Length = 1027
Score = 76.6 bits (187), Expect = 9e-13
Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
Frame = -3
Query: 516 KLAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASY 337
++A +YD ++ + +E ++ A + ++ Y K+ LM YG ++E E+++G + A
Sbjct: 863 EVARRSYDTDMIVDGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAKN 922
Query: 336 LQRDNRRYTDMKDRILISVKDLQREAKEWFEA---DCQQHEY---QAMASAWYHVTYHPK 175
+ + D I ++V+ L++EA+ F D H + +A ASAWYHVTYHP+
Sbjct: 923 FTKKSDA-----DAIRLAVRSLRKEARSRFSEMSLDDNGHGHDASEAKASAWYHVTYHPE 977
Query: 174 YY------HESSSFLSFPWIVGDILLHIK 106
++ +E F+SFPW + + LL IK
Sbjct: 978 FWGCYNEGYERPHFISFPWCIYEKLLRIK 1006
[49][TOP]
>UniRef100_A2X9D0 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2X9D0_ORYSI
Length = 1067
Score = 76.6 bits (187), Expect = 9e-13
Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
Frame = -3
Query: 516 KLAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASY 337
++A +YD ++ + +E ++ A + ++ Y K+ LM YG ++E E+++G + A
Sbjct: 903 EVARRSYDTDMIVDGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAKN 962
Query: 336 LQRDNRRYTDMKDRILISVKDLQREAKEWFEA---DCQQHEY---QAMASAWYHVTYHPK 175
+ + D I ++V+ L++EA+ F D H + +A ASAWYHVTYHP+
Sbjct: 963 FTKKSDA-----DAIRLAVRSLRKEARSRFSEMSLDDNGHGHDASEAKASAWYHVTYHPE 1017
Query: 174 YY------HESSSFLSFPWIVGDILLHIK 106
++ +E F+SFPW + + LL IK
Sbjct: 1018 FWGCYNEGYERPHFISFPWCIYEKLLRIK 1046
[50][TOP]
>UniRef100_Q0DXS3 Probable RNA-dependent RNA polymerase 1 n=1 Tax=Oryza sativa Japonica
Group RepID=RDR1_ORYSJ
Length = 740
Score = 76.6 bits (187), Expect = 9e-13
Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
Frame = -3
Query: 516 KLAEDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASY 337
++A +YD ++ + +E ++ A + ++ Y K+ LM YG ++E E+++G + A
Sbjct: 576 EVARRSYDTDMIVDGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAKN 635
Query: 336 LQRDNRRYTDMKDRILISVKDLQREAKEWFEA---DCQQHEY---QAMASAWYHVTYHPK 175
+ + D I ++V+ L++EA+ F D H + +A ASAWYHVTYHP+
Sbjct: 636 FTKKSDA-----DAIRLAVRSLRKEARSRFSEMSLDDNGHGHDASEAKASAWYHVTYHPE 690
Query: 174 YY------HESSSFLSFPWIVGDILLHIK 106
++ +E F+SFPW + + LL IK
Sbjct: 691 FWGCYNEGYERPHFISFPWCIYEKLLRIK 719
[51][TOP]
>UniRef100_B8A9C4 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8A9C4_ORYSI
Length = 307
Score = 75.5 bits (184), Expect = 2e-12
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 21/152 (13%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD++LE FL +A + Y +++AL+ Y TE EL+TG++ S ++ ++
Sbjct: 133 YDIDLEVPGASDFLASAWQCKCSYDAQLSALLSQYRVRTEAELVTGHI---TSLVKNSSK 189
Query: 318 RYTDMKDRILISVKDLQREAKEWFEA----DCQQHE------YQAMASAWYHVTYHPKYY 169
+ D+KDR+ + L++E K FE+ C+ + Y+ ASAWY VTYHPK+
Sbjct: 190 KQGDIKDRLKTAYSALRKEFKSTFESIASDQCEIDDDEKNLLYEMKASAWYQVTYHPKWV 249
Query: 168 HESSSF-----------LSFPWIVGDILLHIK 106
+S LSF WI D L IK
Sbjct: 250 EKSRGILGPDGEEIPASLSFAWIPVDYLARIK 281
[52][TOP]
>UniRef100_UPI0000DD8B5B Os01g0527600 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000DD8B5B
Length = 385
Score = 72.8 bits (177), Expect = 1e-11
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 21/152 (13%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD++LE FL +A + Y +++AL+ Y TE EL+TG++ ++ ++
Sbjct: 211 YDIDLEVPGASDFLASAWQCKCSYDAQLSALLSQYRVRTEAELVTGHI---TFLVKNSSK 267
Query: 318 RYTDMKDRILISVKDLQREAKEWFEA----------DCQQHEYQAMASAWYHVTYHPKYY 169
+ D+KDR+ + L++E K FE+ D + Y+ ASAWY VTYHPK+
Sbjct: 268 KQGDIKDRLKTAYSALRKEFKSTFESIASDQCEIGDDEKNLLYEMKASAWYQVTYHPKWV 327
Query: 168 HESSSF-----------LSFPWIVGDILLHIK 106
+S LSF WI D L IK
Sbjct: 328 EKSRGILGPDGEEIPASLSFAWIPVDYLARIK 359
[53][TOP]
>UniRef100_B9EXA5 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group
RepID=B9EXA5_ORYSJ
Length = 1571
Score = 72.8 bits (177), Expect = 1e-11
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 21/152 (13%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD++LE FL +A + Y +++AL+ Y TE EL+TG++ ++ ++
Sbjct: 1397 YDIDLEVPGASDFLASAWQCKCSYDAQLSALLSQYRVRTEAELVTGHI---TFLVKNSSK 1453
Query: 318 RYTDMKDRILISVKDLQREAKEWFEA----------DCQQHEYQAMASAWYHVTYHPKYY 169
+ D+KDR+ + L++E K FE+ D + Y+ ASAWY VTYHPK+
Sbjct: 1454 KQGDIKDRLKTAYSALRKEFKSTFESIASDQCEIGDDEKNLLYEMKASAWYQVTYHPKWV 1513
Query: 168 HESSSF-----------LSFPWIVGDILLHIK 106
+S LSF WI D L IK
Sbjct: 1514 EKSRGILGPDGEEIPASLSFAWIPVDYLARIK 1545
[54][TOP]
>UniRef100_Q8LHH9 Probable RNA-dependent RNA polymerase SHL2 n=1 Tax=Oryza sativa
Japonica Group RepID=SHL2_ORYSJ
Length = 1218
Score = 72.8 bits (177), Expect = 1e-11
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 21/152 (13%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD++LE FL +A + Y +++AL+ Y TE EL+TG++ ++ ++
Sbjct: 1044 YDIDLEVPGASDFLASAWQCKCSYDAQLSALLSQYRVRTEAELVTGHI---TFLVKNSSK 1100
Query: 318 RYTDMKDRILISVKDLQREAKEWFEA----------DCQQHEYQAMASAWYHVTYHPKYY 169
+ D+KDR+ + L++E K FE+ D + Y+ ASAWY VTYHPK+
Sbjct: 1101 KQGDIKDRLKTAYSALRKEFKSTFESIASDQCEIGDDEKNLLYEMKASAWYQVTYHPKWV 1160
Query: 168 HESSSF-----------LSFPWIVGDILLHIK 106
+S LSF WI D L IK
Sbjct: 1161 EKSRGILGPDGEEIPASLSFAWIPVDYLARIK 1192
[55][TOP]
>UniRef100_C5Z764 Putative uncharacterized protein Sb10g025950 n=1 Tax=Sorghum bicolor
RepID=C5Z764_SORBI
Length = 1239
Score = 72.4 bits (176), Expect = 2e-11
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 13/147 (8%)
Frame = -3
Query: 507 EDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQR 328
E YD++LE FLE A + +Y ++ L+ YG +E EL+TG + Y
Sbjct: 1079 ETPYDIDLEVPGALSFLEDAWQCKCLYEAQLNTLLSQYGLRSEAELVTGEIWPLVGY--- 1135
Query: 327 DNRRYTDMKDRILISVKDLQREAKEWFEA------DCQQHEYQAMASAWYHVTYHPKYY- 169
N+ +K+RI + L +E + FE+ D + Y+ ASAWY VTYHP++
Sbjct: 1136 -NKYQYQLKERINYAYSKLHQEFRSIFESIDISYCDNKNLAYEMKASAWYQVTYHPEFIR 1194
Query: 168 ------HESSSFLSFPWIVGDILLHIK 106
++ + LSF WI D L IK
Sbjct: 1195 LREPDDEKTPARLSFAWIAVDYLAQIK 1221
[56][TOP]
>UniRef100_C5Z766 Putative uncharacterized protein Sb10g025970 n=1 Tax=Sorghum bicolor
RepID=C5Z766_SORBI
Length = 1251
Score = 71.6 bits (174), Expect = 3e-11
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 14/148 (9%)
Frame = -3
Query: 507 EDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQR 328
E+ YD +LE FLE A + +Y ++ L+ +G +E EL+TG + + Y
Sbjct: 1099 ENQYDTDLEVPGALSFLEDAWKCKCLYEAQLNTLLNQFGVHSEAELVTGEIWSLVGY--- 1155
Query: 327 DNRRYT-DMKDRILISVKDLQREAKEWFEA------DCQQHEYQAMASAWYHVTYHPKYY 169
N++Y +K+R+ + L +E + FE+ D + Y+ ASAWY VTYHP++
Sbjct: 1156 -NKKYQYQLKERLNYAYSKLHQEFRSIFESIDVSYGDSKNLAYEMKASAWYQVTYHPEFI 1214
Query: 168 -------HESSSFLSFPWIVGDILLHIK 106
++ + LSF WI D L IK
Sbjct: 1215 RLRELDDEKTPARLSFAWIPVDYLAQIK 1242
[57][TOP]
>UniRef100_B9HA49 Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9HA49_POPTR
Length = 1198
Score = 70.1 bits (170), Expect = 9e-11
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 21/158 (13%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YDL+LE F+ A + Y ++ L+ Y + E+E++TG++ S + +R
Sbjct: 1024 YDLDLEVLGATDFISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVW---SMPKGSSR 1080
Query: 318 RYTDMKDRILISVKDLQREAKEWFEA----------DCQQHEYQAMASAWYHVTYHPKYY 169
+ D+K+R+ S L+RE ++ FE D + Y+ ASAWY VTYHP +
Sbjct: 1081 KQGDLKERLKHSYNCLKREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVTYHPHWI 1140
Query: 168 HES-----------SSFLSFPWIVGDILLHIKSVNSKV 88
+S S LSF WI D L IK +S++
Sbjct: 1141 QKSLELQDSDGAGISVMLSFAWIAADYLARIKIRHSRI 1178
[58][TOP]
>UniRef100_B4FZU3 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FZU3_MAIZE
Length = 552
Score = 67.8 bits (164), Expect = 4e-10
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 21/152 (13%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD ++E FL +A + Y ++ AL+ YG TE EL+T ++ + Y +R
Sbjct: 378 YDADMEVAGAADFLSSAWQCKCSYETQLNALLNQYGVRTEAELVTEHIWSLPKY---SSR 434
Query: 318 RYTDMKDRILISVKDLQREAKEWFEA----------DCQQHEYQAMASAWYHVTYHPKYY 169
R D+K+R+ + L +E + FE+ D + Y+ ASAWY VTYHP++
Sbjct: 435 RQGDIKERLKNAYYALHKEFRSIFESIVTDQTEISDDEKSRFYEMKASAWYQVTYHPEWV 494
Query: 168 HESSSF-----------LSFPWIVGDILLHIK 106
+S LSF WI + L IK
Sbjct: 495 QKSREMFKSDCEDMPARLSFAWIAVEHLARIK 526
[59][TOP]
>UniRef100_B6DZR9 RNA-directed RNA polymerase 6a (Fragment) n=1 Tax=Hordeum vulgare
RepID=B6DZR9_HORVU
Length = 1047
Score = 67.0 bits (162), Expect = 7e-10
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 27/158 (17%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD ++E FL +A + Y ++ AL+K YG TE EL+T ++ + Y ++R
Sbjct: 867 YDTDMEVPGAADFLSSAWQCKCSYEAQLDALLKQYGVRTEAELVTEHIWSLPKY---NSR 923
Query: 318 RYTDMKDRILISVKDLQREAKEWFEA--------------DCQQHEYQAMASAWYHVTYH 181
+ D+K+R+ + L++E + FE+ D + Y+ ASAWY VTYH
Sbjct: 924 KQGDIKERLKNAYSALRKEYRAIFESVEAPGQAKAVALDDDERNRVYEMKASAWYQVTYH 983
Query: 180 PKYYHES-------------SSFLSFPWIVGDILLHIK 106
PK+ S + LSF WI + L IK
Sbjct: 984 PKWVERSREALLEPDREEDTPARLSFAWIPVEHLARIK 1021
[60][TOP]
>UniRef100_B9IKW9 Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9IKW9_POPTR
Length = 1200
Score = 66.2 bits (160), Expect = 1e-09
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 21/152 (13%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD +LE ++ A + Y ++ L+ Y + E+E++TG++ + Y +R
Sbjct: 1026 YDSDLEVVGASDYISDAWDQKCSYDGQLNGLLSQYKVKREEEVVTGHIWSMPKY---SSR 1082
Query: 318 RYTDMKDRILISVKDLQREAKEWFEADCQQHE----------YQAMASAWYHVTYHPKYY 169
+ ++KDR+ S L++E ++ FE + E Y+ ASAWY V YHP +
Sbjct: 1083 KQGELKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVVYHPHWV 1142
Query: 168 HES-----------SSFLSFPWIVGDILLHIK 106
+S S LSF WI D L IK
Sbjct: 1143 KKSLELQDPDGAGTSVMLSFAWIAADYLARIK 1174
[61][TOP]
>UniRef100_C5XM68 Putative uncharacterized protein Sb03g022880 n=1 Tax=Sorghum bicolor
RepID=C5XM68_SORBI
Length = 1207
Score = 65.5 bits (158), Expect = 2e-09
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 21/152 (13%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD ++E FL +A + Y ++ AL+ YG TE EL+T ++ + Y +R
Sbjct: 1033 YDADMEVPGATDFLSSAWECKCSYETQLNALLNQYGVRTEAELVTEHIWSLPKY---SSR 1089
Query: 318 RYTDMKDRILISVKDLQREAKEWFEA----------DCQQHEYQAMASAWYHVTYHPKYY 169
+ D+K+R+ + L ++ + FE+ D + Y+ ASAWY VTYHPK+
Sbjct: 1090 KQGDIKERLKNAYSALHKDFRSIFESFVTDQTEISDDEKIRFYEMKASAWYQVTYHPKWV 1149
Query: 168 HESSSF-----------LSFPWIVGDILLHIK 106
+S LSF WI + L IK
Sbjct: 1150 QKSREMLKPDFEDMPARLSFAWIGVEHLARIK 1181
[62][TOP]
>UniRef100_B9RP51 RNA-dependent RNA polymerase, putative n=1 Tax=Ricinus communis
RepID=B9RP51_RICCO
Length = 1203
Score = 65.5 bits (158), Expect = 2e-09
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 21/152 (13%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD +LE + ++ A + Y ++ L+ Y + E+E++TG++ S + ++R
Sbjct: 1029 YDKDLEVSGSSDYILDAWDQKCSYDGQLKGLLAQYKVKREEEVVTGHIW---SMPKCNSR 1085
Query: 318 RYTDMKDRILISVKDLQREAKEWFEADCQQHE----------YQAMASAWYHVTYHPKYY 169
+ ++K+R+ S L++E ++ FE E Y+ ASAWY V YHPK+
Sbjct: 1086 KQGELKERLKQSYHSLKKEFRQVFEKMDSDFEQLTEDEKNLLYEQKASAWYQVAYHPKWV 1145
Query: 168 HES-----------SSFLSFPWIVGDILLHIK 106
++S +S LSF WI D L IK
Sbjct: 1146 NKSMELQEPDAAGCASMLSFAWIAADYLARIK 1177
[63][TOP]
>UniRef100_C6T7X1 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T7X1_SOYBN
Length = 290
Score = 62.8 bits (151), Expect = 1e-08
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 28/159 (17%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD +LE F+ A + Y +++ L+ Y + E+E++TG + + Y ++R
Sbjct: 107 YDKDLEVPGSADFIADAWEQKCSYDGQLSGLLGQYKVKREEEVVTGQIWSMPKY---NSR 163
Query: 318 RYTDMKDRILISVKDLQREAKEWFE------ADCQQHE----YQAMASAWYHVTYHPKYY 169
+ ++K+R+ S L++E + FE + + E Y+ ASAWY VTYHP++
Sbjct: 164 KQGELKERLKHSYSALKKEFRHTFEKLNSDVGELSEEEKNLFYEQKASAWYQVTYHPEWV 223
Query: 168 HE------------------SSSFLSFPWIVGDILLHIK 106
+ S+ LSFPWI D L K
Sbjct: 224 KKSLDLQDKSSENQEADSLGSTVMLSFPWIAVDYLARTK 262
[64][TOP]
>UniRef100_C3Z737 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3Z737_BRAFL
Length = 1492
Score = 62.8 bits (151), Expect = 1e-08
Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Frame = -3
Query: 468 EXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNRRYTDMKDRIL 289
+ + A + Y +++ LM YG ETE E ++G + ++ DNR +R+
Sbjct: 1067 QRYKRQAEQSRGRYNDQLKYLMDRYGIETEAEAMSGCIGRIHKHM--DNRYDRHEVERVF 1124
Query: 288 IS-VKDLQREAKEWF------EADCQQHEY----QAMASAWYHVTYHPKYYHESSSFLSF 142
+KDL+R +E F E + ++ +Y QA ASAWY VTY + LSF
Sbjct: 1125 KERIKDLRRRTREEFFVEFGGEKNVKKSDYPPEVQAKASAWYVVTYSDA---NENRLLSF 1181
Query: 141 PWIVGDILLHIK 106
PWIVGDIL IK
Sbjct: 1182 PWIVGDILAVIK 1193
[65][TOP]
>UniRef100_C3Z3S5 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3Z3S5_BRAFL
Length = 1922
Score = 60.8 bits (146), Expect = 5e-08
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 17/151 (11%)
Frame = -3
Query: 507 EDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTG---NLQNRASY 337
+D D +L FE + + A + +Y K+ ++M YG +E E+++G ++ R
Sbjct: 984 DDGVDQDLIREGFESYTDDAQTQLNIYNTKIRSIMSLYGISSEGEVVSGCILKVKQRLGL 1043
Query: 336 LQRDNRRYTDMKDRILISVKDLQREA----------KEWFEADCQQHEYQAMASAWYHVT 187
L+ N R+ ++ + + K L R+ KE D ++ E ASAWY VT
Sbjct: 1044 LK--NERF-EVTEYVRARFKTLWRKTRAEFFRQFDEKEESSTDRRREEQLKKASAWYMVT 1100
Query: 186 YHPKYYHE----SSSFLSFPWIVGDILLHIK 106
Y Y ++ S LSFPW+V D+L +K
Sbjct: 1101 YSDDYNNKPHGASPKLLSFPWVVYDVLGGLK 1131
[66][TOP]
>UniRef100_C5YIV2 Putative uncharacterized protein Sb07g006150 n=1 Tax=Sorghum bicolor
RepID=C5YIV2_SORBI
Length = 1220
Score = 60.1 bits (144), Expect = 9e-08
Identities = 48/161 (29%), Positives = 71/161 (44%), Gaps = 23/161 (14%)
Frame = -3
Query: 519 EKLAED---AYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQN 349
E L +D AYD++LE F A + Y ++ AL+ Y TE EL+TG + +
Sbjct: 1052 ESLIKDGMPAYDIDLEVPGASHFFLDAWQWKCAYESRLNALLNQYSGCTEAELVTGVIWS 1111
Query: 348 RASYLQRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHE----------YQAMASAW 199
A +R + ++ + +L +E + FE + Y+ ASAW
Sbjct: 1112 LADGRKRKKH---EANEKFSHAYPELHQEFRRVFENIAADQDRMSDEKKNLVYEMKASAW 1168
Query: 198 YHVTYHPKYY----------HESSSFLSFPWIVGDILLHIK 106
Y VTYHP++ E + LSFPWI D L IK
Sbjct: 1169 YQVTYHPEWIRFSREKEPHGEERPARLSFPWIAIDYLACIK 1209
[67][TOP]
>UniRef100_A9CRC9 RNA-dependent RNA polymerase 6 n=1 Tax=Nicotiana tabacum
RepID=A9CRC9_TOBAC
Length = 1197
Score = 59.7 bits (143), Expect = 1e-07
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD LE F++ A + + Y ++ L+ Y E+E++TG++ + Y +
Sbjct: 1023 YDSTLEILGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKY---SAK 1079
Query: 318 RYTDMKDRILISVKDLQREAKEWFEA----------DCQQHEYQAMASAWYHVTYHPKYY 169
+ ++K+R+ + L++E + FE D + Y+ ASAWY VTYHP +
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYHPHWV 1139
Query: 168 HES-----------SSFLSFPWIVGDILLHIK 106
S + LSF WI D L IK
Sbjct: 1140 ARSLELQLPDAVSNTVMLSFAWIAADYLARIK 1171
[68][TOP]
>UniRef100_A7P5T3 Chromosome chr4 scaffold_6, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7P5T3_VITVI
Length = 1197
Score = 59.3 bits (142), Expect = 2e-07
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Frame = -3
Query: 462 FLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNRRYTDMKDRILIS 283
F+ A H+ Y ++ L+ Y + E+E++TG++ + Y +R+ ++ +R+ +
Sbjct: 1034 FINDAWIHKCSYDGQLNGLLGQYKVKREEEVVTGHVWSMPKY---KSRKQGELTERLKHA 1090
Query: 282 VKDLQREAKEWFEA----------DCQQHEYQAMASAWYHVTYHPKYYHESSS------- 154
L++E ++ FE D + Y+ ASAWY VTYHP + +S
Sbjct: 1091 YSSLKKEFRQIFEKMNSDFDQLTDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQNPDEV 1150
Query: 153 -----FLSFPWIVGDILLHIK 106
LSF WI D L IK
Sbjct: 1151 FGERVMLSFAWITADYLARIK 1171
[69][TOP]
>UniRef100_C3ZPA8 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3ZPA8_BRAFL
Length = 1867
Score = 59.3 bits (142), Expect = 2e-07
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 16/148 (10%)
Frame = -3
Query: 495 DLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTG---NLQNRASYLQRD 325
D +L F+ ++E A + +Y M ++M YG +E E+++G ++ R L+
Sbjct: 970 DHDLVREGFDSYIEDAQTQLNIYNNMMMSIMSLYGITSEGEVVSGCILKVKQRLGLLK-- 1027
Query: 324 NRRYTDMKDRILISVKDLQREAKEWF---------EADCQQHEYQAMASAWYHVTYHPKY 172
N R+ ++ + + K L R+ + F + ++ E ASAWY VTY Y
Sbjct: 1028 NERF-EVTEYVRARFKTLWRKTRAEFFKQFDVEELSEERRKEEQLKRASAWYMVTYSDAY 1086
Query: 171 ----YHESSSFLSFPWIVGDILLHIKSV 100
+ S LSFPW+V D+L +K +
Sbjct: 1087 DEKPHDPSPKLLSFPWVVYDVLASLKKI 1114
[70][TOP]
>UniRef100_UPI0001868CE3 hypothetical protein BRAFLDRAFT_101874 n=1 Tax=Branchiostoma floridae
RepID=UPI0001868CE3
Length = 1415
Score = 57.8 bits (138), Expect = 4e-07
Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Frame = -3
Query: 495 DLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNRR 316
D L +++ A ++ Y +++ +LM YG ETE E ++G + +++ + R
Sbjct: 977 DCGLVVGEHVSYVKKARRSRDRYNDQLRSLMAQYGIETEAEAVSGCIVKLHKHMEDRHER 1036
Query: 315 YTDMKDRILISVKDLQREAKEWF--------EADCQQHEYQAMASAWYHVTYHPKYYHES 160
Y +++ + ++DL++ ++ F + ASAWY VTY
Sbjct: 1037 Y-EIERVAKVRIEDLRKRTRQDFFEEFGGEESVELDHPHVLGKASAWYTVTYS----DPD 1091
Query: 159 SSFLSFPWIVGDILLHIKS 103
+ LSFPW++GD+L +K+
Sbjct: 1092 AKLLSFPWVIGDVLGILKT 1110
[71][TOP]
>UniRef100_B3TNC1 RNA-dependent RNA polymerase n=1 Tax=Nicotiana attenuata
RepID=B3TNC1_9SOLA
Length = 1197
Score = 57.8 bits (138), Expect = 4e-07
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 21/152 (13%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD +LE F++ A + + Y ++ L+ Y E+E++TG++ + Y +
Sbjct: 1023 YDSSLEIPGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKY---SAK 1079
Query: 318 RYTDMKDRILISVKDLQREAKEWFEA----------DCQQHEYQAMASAWYHVTYHPKYY 169
+ ++K+R+ + L++E + FE D + Y+ ASAWY VTY+P +
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139
Query: 168 H-----------ESSSFLSFPWIVGDILLHIK 106
S+ LSF WI D L IK
Sbjct: 1140 ARSLELQLPDAVSSTVMLSFAWIAADYLARIK 1171
[72][TOP]
>UniRef100_Q71BB5 RNA-directed RNA polymerase-like protein n=1 Tax=Branchiostoma
floridae RepID=Q71BB5_BRAFL
Length = 1005
Score = 57.4 bits (137), Expect = 6e-07
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Frame = -3
Query: 495 DLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTG---NLQNRASYLQRD 325
D +L F+ ++E A + +Y M ++M YG +E E+++G ++ R L+
Sbjct: 850 DHDLVREGFDSYIEDAQTQLNIYNNMMMSIMSLYGITSEGEVVSGCILKVKQRLGLLK-- 907
Query: 324 NRRYTDMKDRILISVKDLQREAKEWF---------EADCQQHEYQAMASAWYHVTYHP-- 178
N R+ ++ + + K L R+ + F + ++ E ASAWY VTY
Sbjct: 908 NERF-EVAEYVRARFKTLWRKTRAEFFKQFDVEELSEERRKEEQLKKASAWYMVTYSDAN 966
Query: 177 KYYHESSSFLSFPWIVGDILLHIKSV 100
K S LSFPW+V D+L +K +
Sbjct: 967 KPLDPSPKLLSFPWVVYDVLASLKKI 992
[73][TOP]
>UniRef100_C3Z728 Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma
floridae RepID=C3Z728_BRAFL
Length = 1207
Score = 56.2 bits (134), Expect = 1e-06
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Frame = -3
Query: 462 FLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNRRYTDMKDRILIS 283
+++ A ++ Y +++ +LM YG ETE E ++G + ++ RY +++ +
Sbjct: 852 YVKKARRSRDRYNDQLRSLMAQYGIETESEAVSGCIVKLHKHMDDRYERY-EIERVAKVR 910
Query: 282 VKDLQREAKEWF--------EADCQQHEYQAMASAWYHVTYHPKYYHESSSFLSFPWIVG 127
++DL++ ++ F + ASAWY VTY + LSFPW++G
Sbjct: 911 IEDLRKRTRQDFFEEFGGEESVELDHPHVLKKASAWYTVTYS----DPDAKLLSFPWVIG 966
Query: 126 DIL--LHIKSVNS 94
DIL L++K+ +
Sbjct: 967 DILGILNLKTATT 979
[74][TOP]
>UniRef100_B5BLP6 RNA-dependent RNA polymerase 6 n=1 Tax=Nicotiana tabacum
RepID=B5BLP6_TOBAC
Length = 1197
Score = 55.1 bits (131), Expect = 3e-06
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 21/152 (13%)
Frame = -3
Query: 498 YDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 319
YD L F++ A + + Y ++ L+ Y E+E++TG++ + Y +
Sbjct: 1023 YDTTLVIPGSTVFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKY---SAK 1079
Query: 318 RYTDMKDRILISVKDLQREAKEWFEA----------DCQQHEYQAMASAWYHVTYHPKYY 169
+ ++K+R+ + L++E + FE D + Y+ ASAWY VTY+P +
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139
Query: 168 H-----------ESSSFLSFPWIVGDILLHIK 106
S+ LSF WI D L IK
Sbjct: 1140 ARSLELQLPDAISSTVMLSFAWIAADYLARIK 1171
[75][TOP]
>UniRef100_UPI0001868BE6 hypothetical protein BRAFLDRAFT_101867 n=1 Tax=Branchiostoma floridae
RepID=UPI0001868BE6
Length = 1395
Score = 53.9 bits (128), Expect = 6e-06
Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 11/106 (10%)
Frame = -3
Query: 390 AETEDELLTGNLQNRASYLQRDNRRYTDMKDRILIS-VKDLQREAKEWF------EADCQ 232
AETE E ++G + ++ DNR +R+ +KDL+R +E F E + +
Sbjct: 982 AETEAEAMSGCIGRIHKHM--DNRYDRHEVERVFKERIKDLRRRTREEFFVEFGGEKNVK 1039
Query: 231 QHEY----QAMASAWYHVTYHPKYYHESSSFLSFPWIVGDILLHIK 106
+ +Y QA ASAWY VTY + LSFPWIVGDIL IK
Sbjct: 1040 KSDYPPEVQAKASAWYVVTYSGA---NENRLLSFPWIVGDILAVIK 1082
[76][TOP]
>UniRef100_A9U458 RNA-directed RNA polymerase (Fragment) n=2 Tax=Physcomitrella patens
subsp. patens RepID=A9U458_PHYPA
Length = 1049
Score = 53.9 bits (128), Expect = 6e-06
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 30/164 (18%)
Frame = -3
Query: 507 EDAYDLNLEANVFEXFLETASSHQEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQR 328
+ YD +L+ +E +L+ A + + Y ++ +M + + E L+ L+ + L+
Sbjct: 885 DSIYDYDLQVPGYEVYLDDAWTKKISYDRQLRCMMTHFNVQREAALIASWLKRGSPGLRS 944
Query: 327 DNRR------------YTDMKDRILISVKDLQRE--AKEWFEADCQQ----HEYQAMASA 202
NR Y + + + K L + +++ E+ + ++ A ASA
Sbjct: 945 VNRNRGDAFAQSYGVLYEEFRAQFEGLKKGLDPDGYSEDMVESSSSEIKGPTDFAAKASA 1004
Query: 201 WYHVTYHPKYYH----------ESS--SFLSFPWIVGDILLHIK 106
WYHVTYHP++ ESS LSFPWI +L +IK
Sbjct: 1005 WYHVTYHPEWKQKALEIFENSGESSPRPLLSFPWITASVLSNIK 1048