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[1][TOP]
>UniRef100_B2B9K0 RNA-dependent RNA polymerase n=1 Tax=Gossypium hirsutum
RepID=B2B9K0_GOSHI
Length = 1110
Score = 192 bits (489), Expect = 1e-47
Identities = 93/132 (70%), Positives = 105/132 (79%), Gaps = 3/132 (2%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGG---D 385
MDYYG+KTEAEILSG IMKMS+SFTK+RDAE+I+MAVRSLRKEAR+WFN+ D
Sbjct: 979 MDYYGVKTEAEILSGGIMKMSRSFTKKRDAESISMAVRSLRKEARSWFNEKGSELDEEID 1038
Query: 384 DAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEKIAWNRRNADXS 205
DAYAKASAWYYVTYHHSYWG Y+EGMNRDH+LSFPWCVY L+QIKKEK A S
Sbjct: 1039 DAYAKASAWYYVTYHHSYWGQYNEGMNRDHFLSFPWCVYDKLIQIKKEKAALREALDLSS 1098
Query: 204 LEYSFSHRLHLN 169
LE+ F HL+
Sbjct: 1099 LEHRFQRGFHLH 1110
[2][TOP]
>UniRef100_B3SND7 RNA-dependent RNA polymerase n=1 Tax=Gossypium hirsutum
RepID=B3SND7_GOSHI
Length = 1110
Score = 189 bits (481), Expect = 9e-47
Identities = 93/132 (70%), Positives = 104/132 (78%), Gaps = 3/132 (2%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGG---D 385
MDYYG+KTEAEIL G IMKMS+SFTK+RDAEAI+MAVRSLRKEAR+WFN+ D
Sbjct: 979 MDYYGVKTEAEILGGGIMKMSRSFTKKRDAEAISMAVRSLRKEARSWFNEKGSELDEEID 1038
Query: 384 DAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEKIAWNRRNADXS 205
DAYAKASAWYYVTYH SYWG Y+EGMNRDH+LSFPWCVY L+QIKKEK A S
Sbjct: 1039 DAYAKASAWYYVTYHPSYWGQYNEGMNRDHFLSFPWCVYDKLIQIKKEKAAVREALDLSS 1098
Query: 204 LEYSFSHRLHLN 169
LE+ F LHL+
Sbjct: 1099 LEHRFQRGLHLH 1110
[3][TOP]
>UniRef100_B9HJH7 Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9HJH7_POPTR
Length = 1133
Score = 186 bits (471), Expect = 1e-45
Identities = 90/133 (67%), Positives = 106/133 (79%), Gaps = 4/133 (3%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGG---GGD 385
M+YYGIKTEAE+LSG+ MKMSKSFTK+RDAEAI MAVRSL+KEAR+WFN+ G D
Sbjct: 1001 MEYYGIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLKKEARSWFNEKGSGLDSQAD 1060
Query: 384 DAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEKIAWNRRNAD-X 208
D AKASAWY+VTYHH+YWGCY+EGMNRDH+LSFPWCVY L+QIK+ A RR+
Sbjct: 1061 DVDAKASAWYHVTYHHNYWGCYNEGMNRDHFLSFPWCVYDKLIQIKRRNSARIRRSLILP 1120
Query: 207 SLEYSFSHRLHLN 169
S+E FS LHL+
Sbjct: 1121 SVERQFSRGLHLS 1133
[4][TOP]
>UniRef100_Q75ZN6 RNA-directed RNA Polymerase (Fragment) n=1 Tax=Vigna unguiculata
RepID=Q75ZN6_VIGUN
Length = 257
Score = 176 bits (446), Expect = 1e-42
Identities = 83/112 (74%), Positives = 95/112 (84%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGGDDAY 376
MDYYGIKTEAEILSGNI+K+SK F KRRDAEAI AV SLRK+AR+WFN+ G GDD Y
Sbjct: 148 MDYYGIKTEAEILSGNIIKLSKCFNKRRDAEAINKAVTSLRKDARSWFNE--GNNGDDEY 205
Query: 375 AKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEKIAWNRR 220
AKASAWY+VTYH SYWGCY++GM RDHYLSFPWCV+ L+QIKK+ +NRR
Sbjct: 206 AKASAWYHVTYHPSYWGCYNQGMGRDHYLSFPWCVFPQLLQIKKK--VFNRR 255
[5][TOP]
>UniRef100_A7P3W5 Chromosome chr1 scaffold_5, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7P3W5_VITVI
Length = 1121
Score = 170 bits (431), Expect = 6e-41
Identities = 82/131 (62%), Positives = 100/131 (76%), Gaps = 3/131 (2%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFN---DSSGGGGD 385
MDYYGIKTE+EILSG+IM+MSKSF +R+DAEAI +AV+SLRKEARTWFN + D
Sbjct: 991 MDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMGSETDSEAD 1050
Query: 384 DAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEKIAWNRRNADXS 205
D YAKASAWY+VTYH YWGCY+EGM+RDH+LSFPWCVY L+ K++K++ + S
Sbjct: 1051 DVYAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWCVYDKLIHTKRKKMSGRSLHLS-S 1109
Query: 204 LEYSFSHRLHL 172
LE S L L
Sbjct: 1110 LERRLSQGLRL 1120
[6][TOP]
>UniRef100_A5AM83 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5AM83_VITVI
Length = 654
Score = 170 bits (431), Expect = 6e-41
Identities = 82/131 (62%), Positives = 100/131 (76%), Gaps = 3/131 (2%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFN---DSSGGGGD 385
MDYYGIKTE+EILSG+IM+MSKSF +R+DAEAI +AV+SLRKEARTWFN + D
Sbjct: 524 MDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMGSETDSEAD 583
Query: 384 DAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEKIAWNRRNADXS 205
D YAKASAWY+VTYH YWGCY+EGM+RDH+LSFPWCVY L+ K++K++ + S
Sbjct: 584 DVYAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWCVYDKLIHTKRKKMSGRSLHLS-S 642
Query: 204 LEYSFSHRLHL 172
LE S L L
Sbjct: 643 LERRLSQGLRL 653
[7][TOP]
>UniRef100_A5ATA5 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5ATA5_VITVI
Length = 697
Score = 170 bits (430), Expect = 8e-41
Identities = 78/111 (70%), Positives = 92/111 (82%), Gaps = 3/111 (2%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGG---GGD 385
MD YGI+TE+EILSG++MKMSKSF KR+DAEAI +AVRSLRKEARTWFN G G D
Sbjct: 533 MDCYGIRTESEILSGSLMKMSKSFDKRKDAEAIALAVRSLRKEARTWFNKMGSGTYAGAD 592
Query: 384 DAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEKIA 232
D YA ASAWY+VTYH YWGCY+EGM DH+LSFPWCVY L+QIK++K++
Sbjct: 593 DVYAIASAWYHVTYHPYYWGCYNEGMYHDHFLSFPWCVYDKLIQIKRDKMS 643
[8][TOP]
>UniRef100_UPI000198295F PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI000198295F
Length = 1109
Score = 167 bits (423), Expect = 5e-40
Identities = 78/111 (70%), Positives = 91/111 (81%), Gaps = 3/111 (2%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGG---GGD 385
MD GI+TE+EILSG+IMKMSKSF KR+DAEAI +AVRSLRKEARTWFN G G D
Sbjct: 989 MDCCGIRTESEILSGSIMKMSKSFDKRKDAEAIALAVRSLRKEARTWFNKMGSGTYAGAD 1048
Query: 384 DAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEKIA 232
D YA ASAWY+VTYH YWGCY+EGM DH+LSFPWCVY L+QIK++K++
Sbjct: 1049 DVYAIASAWYHVTYHPYYWGCYNEGMYHDHFLSFPWCVYDKLIQIKRDKMS 1099
[9][TOP]
>UniRef100_A7P3W3 Chromosome chr1 scaffold_5, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7P3W3_VITVI
Length = 1076
Score = 167 bits (423), Expect = 5e-40
Identities = 78/111 (70%), Positives = 91/111 (81%), Gaps = 3/111 (2%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGG---GGD 385
MD GI+TE+EILSG+IMKMSKSF KR+DAEAI +AVRSLRKEARTWFN G G D
Sbjct: 956 MDCCGIRTESEILSGSIMKMSKSFDKRKDAEAIALAVRSLRKEARTWFNKMGSGTYAGAD 1015
Query: 384 DAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEKIA 232
D YA ASAWY+VTYH YWGCY+EGM DH+LSFPWCVY L+QIK++K++
Sbjct: 1016 DVYAIASAWYHVTYHPYYWGCYNEGMYHDHFLSFPWCVYDKLIQIKRDKMS 1066
[10][TOP]
>UniRef100_Q6L3W8 RNA-directed RNA polymerase, putative n=1 Tax=Solanum demissum
RepID=Q6L3W8_SOLDE
Length = 1139
Score = 165 bits (417), Expect = 2e-39
Identities = 83/129 (64%), Positives = 100/129 (77%), Gaps = 1/129 (0%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGGDDAY 376
MDYYGIKTEAEILSG IMK SK+F +R+DAEAI++AVR+LRKEARTWF + DD
Sbjct: 1013 MDYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRALRKEARTWFKRRNDI--DDML 1070
Query: 375 AKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEKIAWNRRNAD-XSLE 199
KASAWY+VTYH +YWGCY++G+ RDH++SFPWCVY L+QIKKEK A NR + SL
Sbjct: 1071 PKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQIKKEK-ALNRPVLNLSSLR 1129
Query: 198 YSFSHRLHL 172
SH+L L
Sbjct: 1130 AQLSHKLVL 1138
[11][TOP]
>UniRef100_Q6L3P6 RNA-directed RNA polymerase, putative n=1 Tax=Solanum demissum
RepID=Q6L3P6_SOLDE
Length = 1180
Score = 165 bits (417), Expect = 2e-39
Identities = 83/129 (64%), Positives = 100/129 (77%), Gaps = 1/129 (0%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGGDDAY 376
MDYYGIKTEAEILSG IMK SK+F +R+DAEAI++AVR+LRKEARTWF + DD
Sbjct: 1054 MDYYGIKTEAEILSGGIMKASKTFDRRKDAEAISVAVRALRKEARTWFKRRNDI--DDML 1111
Query: 375 AKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEKIAWNRRNAD-XSLE 199
KASAWY+VTYH +YWGCY++G+ RDH++SFPWCVY L+QIKKEK A NR + SL
Sbjct: 1112 PKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQIKKEK-ALNRPVLNLSSLR 1170
Query: 198 YSFSHRLHL 172
SH+L L
Sbjct: 1171 AQLSHKLVL 1179
[12][TOP]
>UniRef100_Q6L3V2 RNA dependent RNA polymerase family protein n=1 Tax=Solanum demissum
RepID=Q6L3V2_SOLDE
Length = 963
Score = 164 bits (416), Expect = 3e-39
Identities = 83/129 (64%), Positives = 100/129 (77%), Gaps = 1/129 (0%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGGDDAY 376
MDYYGIKTEAEILSG IMK SK+F +R+DAEAI++AVR+LRKEARTWF + DD
Sbjct: 837 MDYYGIKTEAEILSGGIMKASKTFDRRKDAEAISVAVRALRKEARTWFKRRNDI--DDML 894
Query: 375 AKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEKIAWNRRNAD-XSLE 199
KASAWY+VTYH +YWGCY++G+ RDH++SFPWCVY L+QIKKEK A NR + SL
Sbjct: 895 PKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQIKKEK-ARNRPVLNLSSLR 953
Query: 198 YSFSHRLHL 172
SH+L L
Sbjct: 954 AQLSHKLVL 962
[13][TOP]
>UniRef100_A4UV17 Putative RNA-dependent RNA-polymerase n=1 Tax=Solanum tuberosum
RepID=A4UV17_SOLTU
Length = 1115
Score = 164 bits (416), Expect = 3e-39
Identities = 83/129 (64%), Positives = 100/129 (77%), Gaps = 1/129 (0%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGGDDAY 376
MDYYGIKTEAEILSG IMK SK+F +R+DAEAI++AVR+LRKEARTWF + DD
Sbjct: 989 MDYYGIKTEAEILSGGIMKASKTFDRRKDAEAISVAVRALRKEARTWFKRRNDI--DDML 1046
Query: 375 AKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEKIAWNRRNAD-XSLE 199
KASAWY+VTYH +YWGCY++G+ RDH++SFPWCVY L+QIKKEK A NR + SL
Sbjct: 1047 PKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQIKKEK-ARNRPVLNLSSLR 1105
Query: 198 YSFSHRLHL 172
SH+L L
Sbjct: 1106 AQLSHKLVL 1114
[14][TOP]
>UniRef100_A4UBI7 Putative RNA-directed RNA polymerase 1 n=1 Tax=Nicotiana attenuata
RepID=A4UBI7_9SOLA
Length = 1044
Score = 164 bits (414), Expect = 5e-39
Identities = 76/106 (71%), Positives = 88/106 (83%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGGDDAY 376
MDYYGIKTEAEILSG +MK SK+F +R+DAEAI +AVRSLRKEARTWF S DD
Sbjct: 918 MDYYGIKTEAEILSGGVMKASKTFDRRKDAEAIGVAVRSLRKEARTWFKKRSDI--DDML 975
Query: 375 AKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEK 238
AKASAWY+VTYHH+YWG Y+EG+ RDH++SFPWCVY L+QIKK K
Sbjct: 976 AKASAWYHVTYHHTYWGLYNEGLRRDHFISFPWCVYDQLIQIKKAK 1021
[15][TOP]
>UniRef100_Q6L447 RNA-directed RNA polymerase-like, putative n=1 Tax=Solanum demissum
RepID=Q6L447_SOLDE
Length = 1137
Score = 162 bits (409), Expect = 2e-38
Identities = 74/106 (69%), Positives = 89/106 (83%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGGDDAY 376
MDYYGIKTEAEILSG IMK SK+F +R+DAEAI++AVR+LRKEARTWF + DD
Sbjct: 1011 MDYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRALRKEARTWFKRRNDI--DDML 1068
Query: 375 AKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEK 238
KASAWY+VTYH +YWGCY++G+ RDH++SFPWCVY L+QIKKEK
Sbjct: 1069 PKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQIKKEK 1114
[16][TOP]
>UniRef100_Q6L3P3 RNA-directed RNA polymerase, putative n=1 Tax=Solanum demissum
RepID=Q6L3P3_SOLDE
Length = 1021
Score = 162 bits (409), Expect = 2e-38
Identities = 74/106 (69%), Positives = 89/106 (83%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGGDDAY 376
MDYYGIKTEAEILSG IMK SK+F +R+DAEAI++AVR+LRKEARTWF + DD
Sbjct: 895 MDYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRALRKEARTWFKRRNDI--DDML 952
Query: 375 AKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEK 238
KASAWY+VTYH +YWGCY++G+ RDH++SFPWCVY L+QIKKEK
Sbjct: 953 PKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQIKKEK 998
[17][TOP]
>UniRef100_Q0KIR2 RNA dependent RNA polymerase family protein n=1 Tax=Solanum demissum
RepID=Q0KIR2_SOLDE
Length = 963
Score = 162 bits (409), Expect = 2e-38
Identities = 74/106 (69%), Positives = 89/106 (83%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGGDDAY 376
MDYYGIKTEAEILSG IMK SK+F +R+DAEAI++AVR+LRKEARTWF + DD
Sbjct: 837 MDYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRALRKEARTWFKRHNDI--DDML 894
Query: 375 AKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEK 238
KASAWY+VTYH +YWGCY++G+ RDH++SFPWCVY L+QIKKEK
Sbjct: 895 PKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQIKKEK 940
[18][TOP]
>UniRef100_C1I213 RNA-dependent RNA polymerase n=1 Tax=Nicotiana glutinosa
RepID=C1I213_NICGU
Length = 1117
Score = 162 bits (409), Expect = 2e-38
Identities = 75/106 (70%), Positives = 88/106 (83%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGGDDAY 376
MDYYGIKTEAEILSG IMK SK+F +R+DA+AI +AVRSLRKEARTWF S DD
Sbjct: 991 MDYYGIKTEAEILSGGIMKASKTFDRRKDADAIGVAVRSLRKEARTWFKRRSDI--DDML 1048
Query: 375 AKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEK 238
AKASAWY+VTYHH+YWG Y+EG+ RDH++SFPWC+Y L+QIKK K
Sbjct: 1049 AKASAWYHVTYHHTYWGFYNEGLKRDHFISFPWCIYDQLIQIKKAK 1094
[19][TOP]
>UniRef100_Q0KIK9 RNA-directed RNA polymerase, putative n=1 Tax=Solanum tuberosum
RepID=Q0KIK9_SOLTU
Length = 1050
Score = 160 bits (405), Expect = 6e-38
Identities = 73/106 (68%), Positives = 89/106 (83%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGGDDAY 376
M+YYGIKTEAEILSG IMK SK+F +R+DAEAI++AVR+LRKEARTWF + DD
Sbjct: 924 MEYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRALRKEARTWFKRRNDI--DDML 981
Query: 375 AKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEK 238
KASAWY+VTYH +YWGCY++G+ RDH++SFPWCVY L+QIKKEK
Sbjct: 982 PKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQIKKEK 1027
[20][TOP]
>UniRef100_Q9ZRY7 RNA-directed RNA polymerase n=1 Tax=Nicotiana tabacum
RepID=Q9ZRY7_TOBAC
Length = 1116
Score = 160 bits (404), Expect = 8e-38
Identities = 75/106 (70%), Positives = 86/106 (81%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGGDDAY 376
MDYYGIKTEAEILSG IMK SK+F +R+DAEAI +AVR LRKEAR WF S DD
Sbjct: 990 MDYYGIKTEAEILSGGIMKASKTFDRRKDAEAIGVAVRCLRKEARAWFKRRSDI--DDML 1047
Query: 375 AKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEK 238
AKASAWY+VTYHH+YWG Y+EG+ RDH++SFPWCVY L+QIKK K
Sbjct: 1048 AKASAWYHVTYHHTYWGLYNEGLKRDHFISFPWCVYDQLIQIKKAK 1093
[21][TOP]
>UniRef100_Q9ZR58 RNA-directed RNA polymerase n=1 Tax=Solanum lycopersicum
RepID=Q9ZR58_SOLLC
Length = 1114
Score = 159 bits (403), Expect = 1e-37
Identities = 81/129 (62%), Positives = 98/129 (75%), Gaps = 1/129 (0%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGGDDAY 376
MDYYGIKTEAEILSG IMK SK+F +R+DAEAI++AVR+LRKEAR WF + DD
Sbjct: 988 MDYYGIKTEAEILSGGIMKASKTFDRRKDAEAISVAVRALRKEARAWFKRRNDI--DDML 1045
Query: 375 AKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEKIAWNRRNAD-XSLE 199
KASAWY+VTYH +YWGCY++G+ R H++SFPWCVY L+QIKK+K A NR + SL
Sbjct: 1046 PKASAWYHVTYHPTYWGCYNQGLKRAHFISFPWCVYDQLIQIKKDK-ARNRPVLNLSSLR 1104
Query: 198 YSFSHRLHL 172
SHRL L
Sbjct: 1105 AQLSHRLVL 1113
[22][TOP]
>UniRef100_B9HJH5 Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9HJH5_POPTR
Length = 1139
Score = 158 bits (400), Expect = 2e-37
Identities = 73/106 (68%), Positives = 85/106 (80%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGGDDAY 376
MDYYGIKTEAEI+SG+IMK+ KSF K+RD ++I ++RSLRK+AR WF D S DD Y
Sbjct: 1011 MDYYGIKTEAEIISGSIMKVGKSFDKKRDFDSINYSIRSLRKQARAWF-DESDNSPDDLY 1069
Query: 375 AKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEK 238
AKASAWYYVTYH SYWG Y+EGMNR H+LSFPWC Y L+ IKK K
Sbjct: 1070 AKASAWYYVTYHPSYWGRYNEGMNRVHFLSFPWCFYDKLIDIKKGK 1115
[23][TOP]
>UniRef100_Q9LQV2 F10B6.19 n=1 Tax=Arabidopsis thaliana RepID=Q9LQV2_ARATH
Length = 1107
Score = 153 bits (387), Expect = 7e-36
Identities = 78/119 (65%), Positives = 90/119 (75%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGGDDAY 376
MDYYGIKTEAEILSG IM+MSKSFTKRRDAE+I AVR+LRKE + FN S + A
Sbjct: 984 MDYYGIKTEAEILSGGIMRMSKSFTKRRDAESIGRAVRALRKETLSLFNASEEEENESA- 1042
Query: 375 AKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEKIAWNRRNADXSLE 199
KASAWY+VTYH SYWG Y+EG+NRDH+LSF WCVY LV+IKK + RR +LE
Sbjct: 1043 -KASAWYHVTYHSSYWGLYNEGLNRDHFLSFAWCVYDKLVRIKKTNL--GRRQRQETLE 1098
[24][TOP]
>UniRef100_Q8H1K9 RNA-dependent RNA polymerase 1 n=1 Tax=Arabidopsis thaliana
RepID=Q8H1K9_ARATH
Length = 1107
Score = 153 bits (387), Expect = 7e-36
Identities = 78/119 (65%), Positives = 90/119 (75%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGGDDAY 376
MDYYGIKTEAEILSG IM+MSKSFTKRRDAE+I AVR+LRKE + FN S + A
Sbjct: 984 MDYYGIKTEAEILSGGIMRMSKSFTKRRDAESIGRAVRALRKETLSLFNASEEEENESA- 1042
Query: 375 AKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEKIAWNRRNADXSLE 199
KASAWY+VTYH SYWG Y+EG+NRDH+LSF WCVY LV+IKK + RR +LE
Sbjct: 1043 -KASAWYHVTYHSSYWGLYNEGLNRDHFLSFAWCVYDKLVRIKKTNL--GRRQRQETLE 1098
[25][TOP]
>UniRef100_Q9ZRX3 RNA-directed RNA polymerase (Fragment) n=1 Tax=Petunia x hybrida
RepID=Q9ZRX3_PETHY
Length = 775
Score = 150 bits (379), Expect = 6e-35
Identities = 70/96 (72%), Positives = 79/96 (82%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGGDDAY 376
MDYYGIKTEAE LSG IMK SK+F +RRDAEAI +AVRSLRKEARTWF S DD
Sbjct: 681 MDYYGIKTEAETLSGGIMKASKTFDRRRDAEAIGVAVRSLRKEARTWFKRRS--DIDDLL 738
Query: 375 AKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVY 268
AKASAWY+V YH +YWGCY+EG+ RDH++SFPWCVY
Sbjct: 739 AKASAWYHVAYHPTYWGCYNEGLKRDHFISFPWCVY 774
[26][TOP]
>UniRef100_C7F747 Putative RNA-dependent RNA polymerase n=1 Tax=Zea mays
RepID=C7F747_MAIZE
Length = 1108
Score = 149 bits (377), Expect = 1e-34
Identities = 71/106 (66%), Positives = 85/106 (80%), Gaps = 2/106 (1%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGG--GGDD 382
MD+YGIK+EAEI+SG I+KM+K+FTK DA+AI MAVRSLRKEAR+WFN+ S G G D
Sbjct: 988 MDHYGIKSEAEIISGCILKMAKNFTKSSDADAIRMAVRSLRKEARSWFNEMSTGEDGQDA 1047
Query: 381 AYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKK 244
AKASAWY+VTYH YWG Y+EG +R H +SFPWCVY LV IK+
Sbjct: 1048 MEAKASAWYHVTYHQQYWGSYNEGYDRPHLISFPWCVYDKLVAIKQ 1093
[27][TOP]
>UniRef100_B9F2V8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group
RepID=B9F2V8_ORYSJ
Length = 1027
Score = 145 bits (367), Expect = 2e-33
Identities = 66/110 (60%), Positives = 89/110 (80%), Gaps = 4/110 (3%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFN----DSSGGGG 388
MD+YGIK+EAEI+SG I+KM+K+FTK+ DA+AI +AVRSLRKEAR+ F+ D +G G
Sbjct: 900 MDHYGIKSEAEIISGCILKMAKNFTKKSDADAIRLAVRSLRKEARSRFSEMSLDDNGHGH 959
Query: 387 DDAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEK 238
D + AKASAWY+VTYH +WGCY+EG R H++SFPWC+Y L++IK+ +
Sbjct: 960 DASEAKASAWYHVTYHPEFWGCYNEGYERPHFISFPWCIYEKLLRIKQRR 1009
[28][TOP]
>UniRef100_A2X9D0 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2X9D0_ORYSI
Length = 1067
Score = 145 bits (367), Expect = 2e-33
Identities = 66/110 (60%), Positives = 89/110 (80%), Gaps = 4/110 (3%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFN----DSSGGGG 388
MD+YGIK+EAEI+SG I+KM+K+FTK+ DA+AI +AVRSLRKEAR+ F+ D +G G
Sbjct: 940 MDHYGIKSEAEIISGCILKMAKNFTKKSDADAIRLAVRSLRKEARSRFSEMSLDDNGHGH 999
Query: 387 DDAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEK 238
D + AKASAWY+VTYH +WGCY+EG R H++SFPWC+Y L++IK+ +
Sbjct: 1000 DASEAKASAWYHVTYHPEFWGCYNEGYERPHFISFPWCIYEKLLRIKQRR 1049
[29][TOP]
>UniRef100_Q0DXS3 Probable RNA-dependent RNA polymerase 1 n=1 Tax=Oryza sativa
Japonica Group RepID=RDR1_ORYSJ
Length = 740
Score = 145 bits (367), Expect = 2e-33
Identities = 66/110 (60%), Positives = 89/110 (80%), Gaps = 4/110 (3%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFN----DSSGGGG 388
MD+YGIK+EAEI+SG I+KM+K+FTK+ DA+AI +AVRSLRKEAR+ F+ D +G G
Sbjct: 613 MDHYGIKSEAEIISGCILKMAKNFTKKSDADAIRLAVRSLRKEARSRFSEMSLDDNGHGH 672
Query: 387 DDAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEK 238
D + AKASAWY+VTYH +WGCY+EG R H++SFPWC+Y L++IK+ +
Sbjct: 673 DASEAKASAWYHVTYHPEFWGCYNEGYERPHFISFPWCIYEKLLRIKQRR 722
[30][TOP]
>UniRef100_B9HVU2 Rna-dependent RNA polymerase (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9HVU2_POPTR
Length = 1102
Score = 144 bits (363), Expect = 4e-33
Identities = 66/105 (62%), Positives = 81/105 (77%), Gaps = 1/105 (0%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDS-SGGGGDDA 379
MDYYGIKTEAEI+ G IM+M +SF K++D E I +V SLRK+AR WFN+S S DD
Sbjct: 998 MDYYGIKTEAEIIGGCIMRMGRSFDKKKDLEGINFSVSSLRKQARAWFNESGSKESPDDV 1057
Query: 378 YAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKK 244
Y KASAWY+VTYH +WG Y+EGM+R H+LSFPWCV+ L +IKK
Sbjct: 1058 YRKASAWYHVTYHPRFWGLYNEGMDRVHFLSFPWCVHDKLFEIKK 1102
[31][TOP]
>UniRef100_Q6RFI0 RNA-directed RNA polymerase 1 n=1 Tax=Hordeum vulgare subsp. vulgare
RepID=Q6RFI0_HORVD
Length = 1115
Score = 142 bits (358), Expect = 2e-32
Identities = 67/111 (60%), Positives = 87/111 (78%), Gaps = 5/111 (4%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWF----NDSSGGGG 388
M++YGI +EAEI+SG I+KM+K+FTK+ DA+AI +AV+SLRKEAR+WF +D SG G
Sbjct: 985 MEHYGINSEAEIISGCILKMAKNFTKKSDADAIRLAVKSLRKEARSWFSEMGSDESGDGH 1044
Query: 387 DDAYAKASAWYYVTYHHSYWGCYDEGM-NRDHYLSFPWCVYSLLVQIKKEK 238
AKASAWY+VTYH YWGCY+EG +R H +SFPWCVY L+ IK++K
Sbjct: 1045 KALVAKASAWYHVTYHPQYWGCYNEGYDHRPHLISFPWCVYDKLILIKQKK 1095
[32][TOP]
>UniRef100_B5M060 RNA-directed RNA polymerase 1b n=1 Tax=Hordeum vulgare
RepID=B5M060_HORVU
Length = 1115
Score = 140 bits (354), Expect = 5e-32
Identities = 66/111 (59%), Positives = 87/111 (78%), Gaps = 5/111 (4%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWF----NDSSGGGG 388
M++YGI +EAEI+SG I+KM+K+FTK+ DA+AI +AV+SLRKEAR+WF +D SG G
Sbjct: 985 MEHYGINSEAEIISGCILKMAKNFTKKSDADAIRLAVKSLRKEARSWFSEMGSDESGDGH 1044
Query: 387 DDAYAKASAWYYVTYHHSYWGCYDEGM-NRDHYLSFPWCVYSLLVQIKKEK 238
AKASAWY+VTYH YWGCY++G +R H +SFPWCVY L+ IK++K
Sbjct: 1045 KALVAKASAWYHVTYHPQYWGCYNKGYDHRPHLISFPWCVYDKLILIKQKK 1095
[33][TOP]
>UniRef100_Q6RFH9 RNA-directed RNA polymerase 2 n=1 Tax=Hordeum vulgare subsp. vulgare
RepID=Q6RFH9_HORVD
Length = 1115
Score = 140 bits (352), Expect = 8e-32
Identities = 65/110 (59%), Positives = 85/110 (77%), Gaps = 4/110 (3%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGGDD-- 382
M++YGIK+EAEI+SG I+KM+K+FTK DA+AI +AV+SLRKEAR+WF+D S D
Sbjct: 986 MEHYGIKSEAEIISGCILKMAKNFTKSSDADAIRLAVKSLRKEARSWFSDMSADESGDVH 1045
Query: 381 --AYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEK 238
+YAKASAWY+VTYH Y+GCY++ R H +SFPWCVY L+ IK+ K
Sbjct: 1046 EASYAKASAWYHVTYHPEYYGCYNKIYERPHLISFPWCVYDKLLHIKQRK 1095
[34][TOP]
>UniRef100_B5M059 RNA-directed RNA polymerase 1a (Fragment) n=1 Tax=Hordeum vulgare
RepID=B5M059_HORVU
Length = 1114
Score = 140 bits (352), Expect = 8e-32
Identities = 65/110 (59%), Positives = 85/110 (77%), Gaps = 4/110 (3%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGGDD-- 382
M++YGIK+EAEI+SG I+KM+K+FTK DA+AI +AV+SLRKEAR+WF+D S D
Sbjct: 986 MEHYGIKSEAEIISGCILKMAKNFTKSSDADAIRLAVKSLRKEARSWFSDMSADESGDVH 1045
Query: 381 --AYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEK 238
+YAKASAWY+VTYH Y+GCY++ R H +SFPWCVY L+ IK+ K
Sbjct: 1046 EASYAKASAWYHVTYHPEYYGCYNKIYERPHLISFPWCVYDKLLHIKQRK 1095
[35][TOP]
>UniRef100_C5XZ94 Putative uncharacterized protein Sb04g028630 n=1 Tax=Sorghum bicolor
RepID=C5XZ94_SORBI
Length = 1114
Score = 139 bits (350), Expect = 1e-31
Identities = 67/108 (62%), Positives = 82/108 (75%), Gaps = 2/108 (1%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGGDD-- 382
MD+YGIK+EAEI+SG +KM+K+FTK DA+AI MAVRSLRKEAR+WFN+ S D
Sbjct: 988 MDHYGIKSEAEIISGCFLKMAKNFTKSSDADAIRMAVRSLRKEARSWFNEMSTSEDDQDA 1047
Query: 381 AYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEK 238
AKASAWY+VTY YWG Y+EG +R H +SFPWCVY LV IK+ +
Sbjct: 1048 TEAKASAWYHVTYDPQYWGNYNEGYDRPHLISFPWCVYDKLVIIKQRR 1095
[36][TOP]
>UniRef100_A4UV46 Putative RNA-dependent RNA-polymerase n=1 Tax=Solanum tuberosum
RepID=A4UV46_SOLTU
Length = 1065
Score = 117 bits (293), Expect = 6e-25
Identities = 56/80 (70%), Positives = 66/80 (82%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSGGGGDDAY 376
MDYYGIKTEAEILSG IMK SK+F +R+DAEAI++AVR+LRKEARTWF + DD
Sbjct: 988 MDYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRALRKEARTWFKRRN--DIDDML 1045
Query: 375 AKASAWYYVTYHHSYWGCYD 316
KASAWY+VTYH +YWGCY+
Sbjct: 1046 PKASAWYHVTYHPTYWGCYN 1065
[37][TOP]
>UniRef100_A9T7J6 RNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9T7J6_PHYPA
Length = 843
Score = 95.5 bits (236), Expect = 2e-18
Identities = 50/107 (46%), Positives = 71/107 (66%), Gaps = 3/107 (2%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRD--AEAITMAVRSLRKEARTWFNDSSGGG-GD 385
M+ YGI+TEAE +SG ++ +++ + KRR+ E I AVRSL EAR F++++ D
Sbjct: 731 MNQYGIETEAEAVSGYMLNLARQYVKRREDVVERIRDAVRSLINEARQRFDENADDMVDD 790
Query: 384 DAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKK 244
D YAKASAWY+VTYH + G H +SFPW +Y++L+QIKK
Sbjct: 791 DIYAKASAWYHVTYHPEHIKVSATGRREVHLISFPWVIYNVLLQIKK 837
[38][TOP]
>UniRef100_B9IEP4 Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9IEP4_POPTR
Length = 1110
Score = 74.7 bits (182), Expect = 4e-12
Identities = 49/119 (41%), Positives = 68/119 (57%), Gaps = 5/119 (4%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMK----MSKSFTKRRDA-EAITMAVRSLRKEARTWFNDSSGGG 391
MDYYG KTE EIL+GN+ + + K D + I +++++L+KEA+ WF S
Sbjct: 1004 MDYYGAKTEDEILTGNLRHRPTYLQRDNRKYGDVKDRILVSLKNLKKEAKEWFESSC--N 1061
Query: 390 GDDAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEKIAWNRRNA 214
+ ASAWY+VTYH +Y + E MN LSFPW V +L+ IK + N RNA
Sbjct: 1062 PTEHQCMASAWYHVTYHPTY---FHERMN---CLSFPWIVGDILLNIK----SLNSRNA 1110
[39][TOP]
>UniRef100_B9RB56 RNA-dependent RNA polymerase, putative n=1 Tax=Ricinus communis
RepID=B9RB56_RICCO
Length = 983
Score = 70.5 bits (171), Expect = 8e-11
Identities = 45/110 (40%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRD-------AEAITMAVRSLRKEARTWFNDSSG 397
MDYY K E EIL+GN+ +K+ +RD + I ++V+SL+KEA+ WF
Sbjct: 859 MDYYEAKKEDEILTGNLQ--NKAMYLQRDNRRYGDTKDRILISVKSLQKEAKEWFESCCQ 916
Query: 396 GGGDDAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIK 247
+ ASAWY+VTYH SY + EG+ LSFPW V +L+ IK
Sbjct: 917 A--KEKQRLASAWYHVTYHPSY---FQEGIT---CLSFPWIVADILLNIK 958
[40][TOP]
>UniRef100_Q647I4 Putative RNA-dependent RNA polymerase RdRP2 n=1 Tax=Nicotiana
benthamiana RepID=Q647I4_NICBE
Length = 1120
Score = 64.3 bits (155), Expect = 6e-09
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 8/111 (7%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRD-------AEAITMAVRSLRKEARTWFNDSSG 397
++YYG + E EIL+GN+ + KS +RD + I ++ +SL+KE + WF +G
Sbjct: 1012 LNYYGAEKEVEILTGNLRQ--KSVYLQRDNRRYFELKDRILVSAKSLQKEVKGWF---TG 1066
Query: 396 GGGDDAYAK-ASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIK 247
+D + K ASAWY+VTYH SY EG + L FPW V +L+ IK
Sbjct: 1067 CCKEDEHKKLASAWYHVTYHPSYC----EG--SANCLGFPWVVGDILLDIK 1111
[41][TOP]
>UniRef100_O82504 F2P3.11 protein n=1 Tax=Arabidopsis thaliana RepID=O82504_ARATH
Length = 1133
Score = 63.5 bits (153), Expect = 1e-08
Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 8/113 (7%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDA------EAITMAVRSLRKEARTWFNDSSGG 394
M YYG E EIL+G I+K + + R + + IT++V+ L KEA WF S
Sbjct: 1014 MIYYGAANEEEILTG-ILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKSCE- 1071
Query: 393 GGDDAYAK--ASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKE 241
D+ K ASAWYYVTY+ ++ DE + +LSFPW V +L+ IK E
Sbjct: 1072 --DEQQKKKLASAWYYVTYNPNH---RDEKLT---FLSFPWIVGDVLLDIKAE 1116
[42][TOP]
>UniRef100_A7PD40 Chromosome chr17 scaffold_12, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PD40_VITVI
Length = 1127
Score = 63.5 bits (153), Expect = 1e-08
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNI-------MKMSKSFTKRRDAEAITMAVRSLRKEARTWFNDSSG 397
M++YG ++E E+L+GN+ + ++ FT+ +D I ++V+SL+KEA+ W S
Sbjct: 1009 MNFYGAESEDEMLTGNLRNKLMYLQRDNRRFTEMKDR--ILISVKSLQKEAKEWLYGSCK 1066
Query: 396 GGGDDAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEKIAWNRRN 217
ASAWY+VTYH ++ ++LSFPW V +L+ IK N R
Sbjct: 1067 P--HQHQKMASAWYHVTYHSTF------SSQTPNFLSFPWIVGEVLLVIKSA----NSRK 1114
Query: 216 ADXS 205
A+ S
Sbjct: 1115 AETS 1118
[43][TOP]
>UniRef100_C3Z737 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3Z737_BRAFL
Length = 1492
Score = 59.7 bits (143), Expect = 1e-07
Identities = 41/115 (35%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRDAEAITMA----VRSLRKEARTWFNDSSGGGG 388
MD YGI+TEAE +SG I ++ K R D + ++ LR+ R F GG
Sbjct: 1088 MDRYGIETEAEAMSGCIGRIHKHMDNRYDRHEVERVFKERIKDLRRRTREEFFVEFGGEK 1147
Query: 387 D--------DAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIK 247
+ + AKASAWY VTY + N + LSFPW V +L IK
Sbjct: 1148 NVKKSDYPPEVQAKASAWYVVTYSDA---------NENRLLSFPWIVGDILAVIK 1193
[44][TOP]
>UniRef100_B9FFL3 Putative uncharacterized protein n=2 Tax=Oryza sativa Japonica
Group RepID=B9FFL3_ORYSJ
Length = 335
Score = 56.2 bits (134), Expect = 2e-06
Identities = 43/122 (35%), Positives = 55/122 (45%), Gaps = 7/122 (5%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRD-------AEAITMAVRSLRKEARTWFNDSSG 397
M+YY + E EIL+GNI +K +RD + I AV +L +EAR W S
Sbjct: 212 MNYYRAELEDEILTGNIR--NKMLYLKRDNKRYFEMKDRIVAAVDALHREARGWLLSSRK 269
Query: 396 GGGDDAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEKIAWNRRN 217
+DA ASAWY VTYH + + SFPW L+ IK RR
Sbjct: 270 E--EDASRMASAWYRVTYH-------PDRRRGKRFWSFPWIACDNLLAIKASSQLRRRRQ 320
Query: 216 AD 211
D
Sbjct: 321 KD 322
[45][TOP]
>UniRef100_Q7XM31 Probable RNA-dependent RNA polymerase 2 n=1 Tax=Oryza sativa Japonica
Group RepID=RDR2_ORYSJ
Length = 1136
Score = 56.2 bits (134), Expect = 2e-06
Identities = 43/122 (35%), Positives = 55/122 (45%), Gaps = 7/122 (5%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRD-------AEAITMAVRSLRKEARTWFNDSSG 397
M+YY + E EIL+GNI +K +RD + I AV +L +EAR W S
Sbjct: 1013 MNYYRAELEDEILTGNIR--NKMLYLKRDNKRYFEMKDRIVAAVDALHREARGWLLSSRK 1070
Query: 396 GGGDDAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEKIAWNRRN 217
+DA ASAWY VTYH + + SFPW L+ IK RR
Sbjct: 1071 E--EDASRMASAWYRVTYH-------PDRRRGKRFWSFPWIACDNLLAIKASSQLRRRRQ 1121
Query: 216 AD 211
D
Sbjct: 1122 KD 1123
[46][TOP]
>UniRef100_Q19VG2 RNA-dependent RNA polymerase n=1 Tax=Zea mays RepID=Q19VG2_MAIZE
Length = 1127
Score = 55.8 bits (133), Expect = 2e-06
Identities = 41/110 (37%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRD-------AEAITMAVRSLRKEARTWFNDSSG 397
M YY + E EIL+GNI +K RRD + I AV +L E R W
Sbjct: 1009 MTYYSAEREDEILTGNIR--NKLVYLRRDNKRYFEMKDRIIAAVDALHAEVRGWLRACKE 1066
Query: 396 GGGDDAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIK 247
DDA ASAWY+VTYH G + SFPW + L+ IK
Sbjct: 1067 ---DDASRVASAWYHVTYHPDRRG-------EKRFWSFPWIICDTLLAIK 1106
[47][TOP]
>UniRef100_C4JBQ0 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C4JBQ0_MAIZE
Length = 525
Score = 55.8 bits (133), Expect = 2e-06
Identities = 41/110 (37%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRD-------AEAITMAVRSLRKEARTWFNDSSG 397
M YY + E EIL+GNI +K RRD + I AV +L E R W
Sbjct: 407 MTYYSAEREDEILTGNIR--NKLVYLRRDNKRYFEMKDRIIAAVDALHAEVRGWLRACKE 464
Query: 396 GGGDDAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIK 247
DDA ASAWY+VTYH G + SFPW + L+ IK
Sbjct: 465 ---DDASRVASAWYHVTYHPDRRG-------EKRFWSFPWIICDTLLAIK 504
[48][TOP]
>UniRef100_A2XUF4 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2XUF4_ORYSI
Length = 1136
Score = 55.8 bits (133), Expect = 2e-06
Identities = 43/122 (35%), Positives = 55/122 (45%), Gaps = 7/122 (5%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRD-------AEAITMAVRSLRKEARTWFNDSSG 397
M+YY + E EIL+GNI +K +RD + I AV +L +EAR W S
Sbjct: 1013 MNYYRAEHEDEILTGNIR--NKMLYLKRDNKRYFEMKDRIVAAVDALHREARGWLLSSRK 1070
Query: 396 GGGDDAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIKKEKIAWNRRN 217
+DA ASAWY VTYH + + SFPW L+ IK RR
Sbjct: 1071 E--EDASRMASAWYRVTYH-------PDRRRGKRFWSFPWIACDNLLAIKASSQLRRRRQ 1121
Query: 216 AD 211
D
Sbjct: 1122 KD 1123
[49][TOP]
>UniRef100_C5YA80 Putative uncharacterized protein Sb06g019330 n=1 Tax=Sorghum bicolor
RepID=C5YA80_SORBI
Length = 1128
Score = 54.3 bits (129), Expect = 6e-06
Identities = 41/110 (37%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Frame = -2
Query: 555 MDYYGIKTEAEILSGNIMKMSKSFTKRRD-------AEAITMAVRSLRKEARTWFNDSSG 397
M YY + E EIL+GNI +K RRD + I AV +L E R W
Sbjct: 1010 MTYYSAEHEDEILTGNIR--NKLVYLRRDNKRYFEMKDRIIAAVDALHAEVRGWLRARKE 1067
Query: 396 GGGDDAYAKASAWYYVTYHHSYWGCYDEGMNRDHYLSFPWCVYSLLVQIK 247
DDA ASAWY+VTYH G + SFPW L+ IK
Sbjct: 1068 ---DDASKLASAWYHVTYHPDRRG-------EKRFWSFPWVACDTLLAIK 1107