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[1][TOP]
>UniRef100_Q9FW98 Putative non-LTR retroelement reverse transcriptase n=2 Tax=Oryza
sativa Japonica Group RepID=Q9FW98_ORYSJ
Length = 1382
Score = 66.6 bits (161), Expect = 1e-09
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Frame = -2
Query: 494 WEPPPEGIIKVNIDAG-WSGSCSTGFSLVARSHNAVMLVAATHLEETQIEPTLAEALALR 318
W+PPP + +N DA +S S + G + R + LVA + + + P LAEALA+R
Sbjct: 1224 WQPPPASVWMINSDAAIFSSSRTMGVGALIRDNTGKCLVACSEMISDVVLPELAEALAIR 1283
Query: 317 WCLSMIKEMEMERIIVESYSLVVLNTLHPK-TQRPDIELVVYDSRELAAEFNFIHFKHIG 141
L + KE +E I++ S L V+ + R + V+ D ++LA+ F F H+
Sbjct: 1284 RALGLAKEEGLEHIVMASDCLTVIRRIQTSGRDRSGVGCVIEDIKKLASTFVLCSFMHVN 1343
Query: 140 R 138
R
Sbjct: 1344 R 1344
[2][TOP]
>UniRef100_Q7Y193 Putative reverse transcriptase n=1 Tax=Oryza sativa Japonica Group
RepID=Q7Y193_ORYSJ
Length = 404
Score = 65.1 bits (157), Expect = 3e-09
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Frame = -2
Query: 533 RKESSIEAPRRMVWEPPPEGIIKVNIDAG-WSGSCSTGFSLVARSHNAVMLVAATHLEET 357
R E++ PR W+P P G+ +N DA +S S + G + R + LVA + +
Sbjct: 236 RGENTQAIPR---WQPLPAGVWMINSDAAIFSSSRTMGVGALIRDNTGKCLVACSEMISD 292
Query: 356 QIEPTLAEALALRWCLSMIKEMEMERIIVESYSLVVLNTLHPK-TQRPDIELVVYDSREL 180
+ P LAEALA+R L + KE ++ I++ S L V+ + R + V+ D ++L
Sbjct: 293 VVLPELAEALAIRRALGLAKEEGLQHIVMASDCLTVIRRIQTSGRDRSGVGCVIEDIKKL 352
Query: 179 AAEFNFIHFKHIGR 138
A+ F F H+ R
Sbjct: 353 ASTFVLCSFMHVNR 366
[3][TOP]
>UniRef100_Q60DM2 F-box domain containing protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q60DM2_ORYSJ
Length = 855
Score = 65.1 bits (157), Expect = 3e-09
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Frame = -2
Query: 533 RKESSIEAPRRMVWEPPPEGIIKVNIDAG-WSGSCSTGFSLVARSHNAVMLVAATHLEET 357
R E++ PR W+P P G+ +N DA +S S + G + R + LVA + +
Sbjct: 687 RGENTQAIPR---WQPLPAGVWMINSDAAIFSSSRTMGVGALIRDNTGKCLVACSEMISD 743
Query: 356 QIEPTLAEALALRWCLSMIKEMEMERIIVESYSLVVLNTLHPK-TQRPDIELVVYDSREL 180
+ P LAEALA+R L + KE ++ I++ S L V+ + R + V+ D ++L
Sbjct: 744 VVLPELAEALAIRRALGLAKEEGLQHIVMASDCLTVIRRIQTSGRDRSGVGCVIEDIKKL 803
Query: 179 AAEFNFIHFKHIGR 138
A+ F F H+ R
Sbjct: 804 ASTFVLCSFMHVNR 817
[4][TOP]
>UniRef100_B9FA69 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group
RepID=B9FA69_ORYSJ
Length = 1145
Score = 65.1 bits (157), Expect = 3e-09
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Frame = -2
Query: 533 RKESSIEAPRRMVWEPPPEGIIKVNIDAG-WSGSCSTGFSLVARSHNAVMLVAATHLEET 357
R E++ PR W+P P G+ +N DA +S S + G + R + LVA + +
Sbjct: 977 RGENTQAIPR---WQPLPAGVWMINSDAAIFSSSRTMGVGALIRDNTGKCLVACSEMISD 1033
Query: 356 QIEPTLAEALALRWCLSMIKEMEMERIIVESYSLVVLNTLHPK-TQRPDIELVVYDSREL 180
+ P LAEALA+R L + KE ++ I++ S L V+ + R + V+ D ++L
Sbjct: 1034 VVLPELAEALAIRRALGLAKEEGLQHIVMASDCLTVIRRIQTSGRDRSGVGCVIEDIKKL 1093
Query: 179 AAEFNFIHFKHIGR 138
A+ F F H+ R
Sbjct: 1094 ASTFVLCSFMHVNR 1107
[5][TOP]
>UniRef100_B8AP27 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8AP27_ORYSI
Length = 834
Score = 65.1 bits (157), Expect = 3e-09
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Frame = -2
Query: 533 RKESSIEAPRRMVWEPPPEGIIKVNIDAG-WSGSCSTGFSLVARSHNAVMLVAATHLEET 357
R E++ PR W+P P G+ +N DA +S S + G + R + LVA + +
Sbjct: 666 RGENTQAIPR---WQPLPAGVWMINSDAAIFSSSRTMGVGALIRDNTGKCLVACSEMISD 722
Query: 356 QIEPTLAEALALRWCLSMIKEMEMERIIVESYSLVVLNTLHPK-TQRPDIELVVYDSREL 180
+ P LAEALA+R L + KE ++ I++ S L V+ + R + V+ D ++L
Sbjct: 723 VVLPELAEALAIRRALGLAKEEGLQHIVMASDCLTVIRRIQTSGRDRSGVGCVIEDIKKL 782
Query: 179 AAEFNFIHFKHIGR 138
A+ F F H+ R
Sbjct: 783 ASTFVLCSFMHVNR 796
[6][TOP]
>UniRef100_B9EYH0 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group
RepID=B9EYH0_ORYSJ
Length = 1049
Score = 64.3 bits (155), Expect = 6e-09
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 3/127 (2%)
Frame = -2
Query: 539 QDRKESSIEAPRRMV-WEPPPEGIIKVNIDAG-WSGSCSTGFSLVARSHNAVMLVAATHL 366
+DR S + P + W+PPP G++ +N DA + S TG + V R H+A L+AA
Sbjct: 916 KDRNASGCDLPLPVTKWKPPPPGMVLINSDAALFQASNQTGLAFVIRDHSATCLLAANKR 975
Query: 365 EETQIEPTLAEALALRWCLSMIKEMEMERIIVESYSLVVLNTLHPKTQRPD-IELVVYDS 189
+ P LAEALA+R+ L K + +++ S L V+ + + + ++V D
Sbjct: 976 ITGLLSPELAEALAIRFALEHAKAEGFQNVLMASDCLSVIKRIQSGARDLSVVGVIVRDI 1035
Query: 188 RELAAEF 168
++L EF
Sbjct: 1036 KKLETEF 1042
[7][TOP]
>UniRef100_B9FQ15 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group
RepID=B9FQ15_ORYSJ
Length = 940
Score = 62.0 bits (149), Expect = 3e-08
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Frame = -2
Query: 494 WEPPPEGIIKVNIDAGWSGSCST-GFSLVARSHNAVMLVAATHLEETQIEPTLAEALALR 318
W PPPEG I +N DA S ++ G + R H+ + L AA I+P +AEALA+R
Sbjct: 782 WRPPPEGTILINTDAAVFQSVNSFGLGFLFRDHSGLCLFAANERHSGCIQPEMAEALAIR 841
Query: 317 WCLSMIKEMEMERIIVESYSLVVLNTLHPKTQ-RPDIELVVYDSRELAAEFNFIHFKHIG 141
L E ++I++ S L ++ + + R + +V D LAA F F H+
Sbjct: 842 CALRTAMEEGHQKIVLASDCLAIIQKIQSGARDRSMVGALVSDINFLAAGFLDCSFIHVN 901
Query: 140 R 138
R
Sbjct: 902 R 902
[8][TOP]
>UniRef100_B8A767 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8A767_ORYSI
Length = 995
Score = 61.2 bits (147), Expect = 5e-08
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Frame = -2
Query: 539 QDRKESSIEAPRRMV-WEPPPEGIIKVNIDAG-WSGSCSTGFSLVARSHNAVMLVAATHL 366
+DR S + P + W PPP G++ +N DA + S TG + V R H+A ++AA
Sbjct: 862 KDRNASGCDLPLPVTKWTPPPPGMVLINSDAALFQASNQTGLAFVIRDHSATCMLAANKR 921
Query: 365 EETQIEPTLAEALALRWCLSMIKEMEMERIIVESYSLVVLNTLHPKTQRPD-IELVVYDS 189
+ P LAEAL +R+ L K + +++ S L V+ + + + ++V D
Sbjct: 922 ITGLLSPELAEALVIRFALEHAKAEGFQNVLMASDCLSVIKRIQSGARDLSVVGVIVRDI 981
Query: 188 RELAAEF 168
++L EF
Sbjct: 982 KKLETEF 988
[9][TOP]
>UniRef100_A2Q3Z5 Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago
truncatula RepID=A2Q3Z5_MEDTR
Length = 216
Score = 58.9 bits (141), Expect = 2e-07
Identities = 38/143 (26%), Positives = 62/143 (43%)
Frame = -2
Query: 494 WEPPPEGIIKVNIDAGWSGSCSTGFSLVARSHNAVMLVAATHLEETQIEPTLAEALALRW 315
W PP +K NIDAG + LV R+H + +L AAT + + LAE L LRW
Sbjct: 90 WIAPPTDFLKANIDAGRDKHWKVTWGLVIRNHESEVLFAATQSPDIMADALLAETLGLRW 149
Query: 314 CLSMIKEMEMERIIVESYSLVVLNTLHPKTQRPDIELVVYDSRELAAEFNFIHFKHIGRK 135
+ + E+++ ++ E + VV+ + + I + D +L
Sbjct: 150 GIQTVLELQLSNVLFELDAYVVVKCFNGMSTIASIIPFISDCHDLFG------------S 197
Query: 134 VINSGTCFGRFSC*LSR*SLVGC 66
++ S F SC ++VGC
Sbjct: 198 IVGSSVSFVNRSC-----NVVGC 215
[10][TOP]
>UniRef100_O22148 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=O22148_ARATH
Length = 1374
Score = 57.4 bits (137), Expect = 7e-07
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Frame = -2
Query: 506 RRMVWEPPPEGIIKVNIDAGWS---GSCSTGFSLVARSHNAVMLVAATHLEETQIEPTLA 336
R + W+PP G +K N D WS G+C G+ V R+H +L +Q
Sbjct: 1211 RCVKWQPPSHGWVKCNTDGAWSKDLGNCGVGW--VLRNHTGRLLWLGLRALPSQQSVLET 1268
Query: 335 EALALRWCLSMIKEMEMERIIVESYSLVVLNTLHPKTQRPDIELVVYDSRELAAEFNFIH 156
E ALRW + + R+I ES S +++ + + P + + D R L F +
Sbjct: 1269 EVEALRWAVLSLSRFNYRRVIFESDSQYLVSLIQNEMDIPSLAPRIQDIRNLLRHFEEVK 1328
Query: 155 FKHIGRK 135
F+ R+
Sbjct: 1329 FQFTRRE 1335
[11][TOP]
>UniRef100_Q851E1 Putative uncharacterized protein OSJNBa0010B01.1 n=1 Tax=Oryza
sativa Japonica Group RepID=Q851E1_ORYSJ
Length = 499
Score = 57.0 bits (136), Expect = 9e-07
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = -2
Query: 542 AQDRKESSIEAPRRMVWEPPPEGIIKVNIDAG-WSGSCSTGFSLVARSHNAVMLVAATHL 366
A R +SS PR W PPP G + +N DA + SC G + R H+ L+A
Sbjct: 411 AAPRGDSSPSIPR---WTPPPVGTVMINCDAALFQSSCQMGIGFLIRDHDGRCLLALNER 467
Query: 365 EETQIEPTLAEALALRWCLSMIKE 294
+ +P LAEA+A+R LS+ KE
Sbjct: 468 VQNVTQPELAEAVAIRRALSLAKE 491
[12][TOP]
>UniRef100_Q10ES2 Expressed protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q10ES2_ORYSJ
Length = 718
Score = 57.0 bits (136), Expect = 9e-07
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = -2
Query: 542 AQDRKESSIEAPRRMVWEPPPEGIIKVNIDAG-WSGSCSTGFSLVARSHNAVMLVAATHL 366
A R +SS PR W PPP G + +N DA + SC G + R H+ L+A
Sbjct: 630 AAPRGDSSPSIPR---WTPPPVGTVMINCDAALFQSSCQMGIGFLIRDHDGRCLLALNER 686
Query: 365 EETQIEPTLAEALALRWCLSMIKE 294
+ +P LAEA+A+R LS+ KE
Sbjct: 687 VQNVTQPELAEAVAIRRALSLAKE 710
[13][TOP]
>UniRef100_B9FAQ8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9FAQ8_ORYSJ
Length = 469
Score = 57.0 bits (136), Expect = 9e-07
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = -2
Query: 542 AQDRKESSIEAPRRMVWEPPPEGIIKVNIDAG-WSGSCSTGFSLVARSHNAVMLVAATHL 366
A R +SS PR W PPP G + +N DA + SC G + R H+ L+A
Sbjct: 11 AAPRGDSSPSIPR---WTPPPVGTVMINCDAALFQSSCQMGIGFLIRDHDGRCLLALNER 67
Query: 365 EETQIEPTLAEALALRWCLSMIKE 294
+ +P LAEA+A+R LS+ KE
Sbjct: 68 VQNVTQPELAEAVAIRRALSLAKE 91
[14][TOP]
>UniRef100_B9F4A9 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9F4A9_ORYSJ
Length = 420
Score = 56.2 bits (134), Expect = 2e-06
Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Frame = -2
Query: 494 WEPPPEGIIKVNIDAG-WSGSCSTGFSLVARSHNAVMLVAATHLEETQIEPTLAEALALR 318
W PPP G+ +N DA + G +V R + L+AA +P AEA A+R
Sbjct: 262 WVPPPAGVFLINTDAAVFQAERQMGVGVVIRDQHGNCLLAANTRFMGITDPETAEACAIR 321
Query: 317 WCLSMIKEMEMERIIVESYSLVVLNTLH-PKTQRPDIELVVYDSRELAAEF---NFIHFK 150
L + KE +IV L V+ L+ P R I +V D ++L EF +FIH
Sbjct: 322 HALWLAKEEGFHNVIVACDCLSVIQKLNSPGRDRSKIGCLVEDIKKLGVEFISVSFIHVS 381
Query: 149 H 147
H
Sbjct: 382 H 382
[15][TOP]
>UniRef100_B8AE80 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8AE80_ORYSI
Length = 556
Score = 56.2 bits (134), Expect = 2e-06
Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Frame = -2
Query: 494 WEPPPEGIIKVNIDAG-WSGSCSTGFSLVARSHNAVMLVAATHLEETQIEPTLAEALALR 318
W PPP G+ +N DA + G +V R + L+AA +P AEA A+R
Sbjct: 398 WVPPPAGVFLINTDAAVFQAERQMGVGVVIRDQHGNCLLAANTRFMGITDPETAEACAIR 457
Query: 317 WCLSMIKEMEMERIIVESYSLVVLNTLH-PKTQRPDIELVVYDSRELAAEF---NFIHFK 150
L + KE +IV L V+ L+ P R I +V D ++L EF +FIH
Sbjct: 458 HALWLAKEEGFHNVIVACDCLSVIQKLNSPGRDRSKIGCLVEDIKKLGVEFISVSFIHVS 517
Query: 149 H 147
H
Sbjct: 518 H 518
[16][TOP]
>UniRef100_B9SIV2 Putative uncharacterized protein n=1 Tax=Ricinus communis
RepID=B9SIV2_RICCO
Length = 191
Score = 54.3 bits (129), Expect = 6e-06
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Frame = -2
Query: 494 WEPPPEGIIKVNIDAG-WSGSCSTGFSLVARSHNAVMLVAATHLEETQIEPTLAEALALR 318
W P +K+N DAG + TG+ +V R+H A ++ A + E LAEA+A+R
Sbjct: 53 WRKPHNEYLKINEDAGIFQAQNRTGYGMVVRNHAANLVAARALIIHGVYEANLAEAMAVR 112
Query: 317 WCLSMIKEMEMERIIVESYSLVVLNTLHPKTQRPDIELVVYDSRELAAEFNFIHFKHIGR 138
LS IK M R+ ++ SL V L + L++ + + A + F I R
Sbjct: 113 EALSWIKHMNWSRVSIDMDSLGVCVAL--TSDNLSFGLIIDGCKHVVANIHDAAFTCIRR 170
Query: 137 KVINSGTCFGRFSC*LSR 84
+ R S LSR
Sbjct: 171 STNHCAHMLARASVSLSR 188