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[1][TOP]
>UniRef100_C6T7E3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T7E3_SOYBN
Length = 291
Score = 157 bits (396), Expect = 6e-37
Identities = 77/100 (77%), Positives = 90/100 (90%)
Frame = -3
Query: 554 PLEEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEI 375
P+EED+ +SP EEE ++ EVVRTKYFDMPPLTV+EAIEQL NVDH FY FRNEETGEI
Sbjct: 194 PVEEDEILSPQEEE--ESIDEVVRTKYFDMPPLTVAEAIEQLENVDHDFYGFRNEETGEI 251
Query: 374 NIVYKRKEGGYGLIIPKGNGQAEKLEPLMVEPAREASLKE 255
NIVYKRKEGGYGLI+PKG+G+AEKLEP+++EPA E+SLKE
Sbjct: 252 NIVYKRKEGGYGLIVPKGDGEAEKLEPVVLEPAIESSLKE 291
[2][TOP]
>UniRef100_B9I297 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I297_POPTR
Length = 306
Score = 147 bits (370), Expect = 7e-34
Identities = 73/95 (76%), Positives = 84/95 (88%)
Frame = -3
Query: 539 DDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYK 360
D++S ++E E ++ EVVRTK+FDMPPLTVSEAIEQL NVDH FY FRNEETGEINIVYK
Sbjct: 214 DEVS--QQEVEDSIEEVVRTKFFDMPPLTVSEAIEQLENVDHDFYGFRNEETGEINIVYK 271
Query: 359 RKEGGYGLIIPKGNGQAEKLEPLMVEPAREASLKE 255
RK GGYGLIIPKGN +AE+LEPL+VEPARE+SL E
Sbjct: 272 RKAGGYGLIIPKGNDEAERLEPLVVEPARESSLAE 306
[3][TOP]
>UniRef100_B9IDE9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IDE9_POPTR
Length = 231
Score = 145 bits (366), Expect = 2e-33
Identities = 72/97 (74%), Positives = 81/97 (83%)
Frame = -3
Query: 545 EDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIV 366
EDD ++E E + EVVRTKYFDMPPLTVSEAIEQL +V H FY FR+EETGEINI+
Sbjct: 135 EDDADEVSQQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEHVHHDFYGFRDEETGEINII 194
Query: 365 YKRKEGGYGLIIPKGNGQAEKLEPLMVEPAREASLKE 255
YKRK GGYGLIIPKGNG+AE+LEPL+VEPARE SL E
Sbjct: 195 YKRKAGGYGLIIPKGNGEAERLEPLVVEPAREPSLAE 231
[4][TOP]
>UniRef100_A9PHY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9PHY3_POPTR
Length = 306
Score = 145 bits (366), Expect = 2e-33
Identities = 72/97 (74%), Positives = 81/97 (83%)
Frame = -3
Query: 545 EDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIV 366
EDD ++E E + EVVRTKYFDMPPLTVSEAIEQL +V H FY FR+EETGEINI+
Sbjct: 210 EDDADEVSQQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEHVHHDFYGFRDEETGEINII 269
Query: 365 YKRKEGGYGLIIPKGNGQAEKLEPLMVEPAREASLKE 255
YKRK GGYGLIIPKGNG+AE+LEPL+VEPARE SL E
Sbjct: 270 YKRKAGGYGLIIPKGNGEAERLEPLVVEPAREPSLAE 306
[5][TOP]
>UniRef100_B9SEK8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative n=1
Tax=Ricinus communis RepID=B9SEK8_RICCO
Length = 311
Score = 144 bits (364), Expect = 3e-33
Identities = 72/102 (70%), Positives = 84/102 (82%), Gaps = 2/102 (1%)
Frame = -3
Query: 554 PLEEDDDI--SPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETG 381
P+++D D L +E E + EVVRTKYFDMPPLTVSEAIEQL NVDH FY FRNEETG
Sbjct: 210 PVKDDTDEVDGVLGDEDEDYIDEVVRTKYFDMPPLTVSEAIEQLKNVDHDFYGFRNEETG 269
Query: 380 EINIVYKRKEGGYGLIIPKGNGQAEKLEPLMVEPAREASLKE 255
EINI+YKRK GGYG+IIPK NG+AEKLEP+++EPARE S+ E
Sbjct: 270 EINIIYKRKAGGYGIIIPKENGKAEKLEPVVIEPAREPSIAE 311
[6][TOP]
>UniRef100_UPI0001984F94 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984F94
Length = 298
Score = 136 bits (343), Expect = 9e-31
Identities = 66/99 (66%), Positives = 82/99 (82%)
Frame = -3
Query: 551 LEEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEIN 372
+EE+ D+ P +E+G+ + E+VRTKYFDMPPLTV EA+EQL NVDH F+ FRNEETGEIN
Sbjct: 201 VEEEADVVPQKEDGDL-INEIVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRNEETGEIN 259
Query: 371 IVYKRKEGGYGLIIPKGNGQAEKLEPLMVEPAREASLKE 255
I+YKRK GGYGLIIPK NG+ E+LEP++V+ RE SL E
Sbjct: 260 ILYKRKAGGYGLIIPKENGKTEELEPVVVKSDREPSLAE 298
[7][TOP]
>UniRef100_A7QEV5 Chromosome chr16 scaffold_86, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QEV5_VITVI
Length = 230
Score = 136 bits (343), Expect = 9e-31
Identities = 66/99 (66%), Positives = 82/99 (82%)
Frame = -3
Query: 551 LEEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEIN 372
+EE+ D+ P +E+G+ + E+VRTKYFDMPPLTV EA+EQL NVDH F+ FRNEETGEIN
Sbjct: 133 VEEEADVVPQKEDGDL-INEIVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRNEETGEIN 191
Query: 371 IVYKRKEGGYGLIIPKGNGQAEKLEPLMVEPAREASLKE 255
I+YKRK GGYGLIIPK NG+ E+LEP++V+ RE SL E
Sbjct: 192 ILYKRKAGGYGLIIPKENGKTEELEPVVVKSDREPSLAE 230
[8][TOP]
>UniRef100_Q672Q2 Chloroplast-specific ribosomal protein n=1 Tax=Solanum lycopersicum
RepID=Q672Q2_SOLLC
Length = 311
Score = 130 bits (328), Expect = 5e-29
Identities = 65/99 (65%), Positives = 79/99 (79%)
Frame = -3
Query: 551 LEEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEIN 372
L +++++ + +G T EVVR K FDMPPL+V+EAIEQL NVDH FY FRNEETGEIN
Sbjct: 215 LSQEEEVEDDKSDGFVT--EVVRKKSFDMPPLSVNEAIEQLENVDHDFYGFRNEETGEIN 272
Query: 371 IVYKRKEGGYGLIIPKGNGQAEKLEPLMVEPAREASLKE 255
IVY+RKEGGYGLIIPK +G+ EKLEPL VEP +E S+ E
Sbjct: 273 IVYRRKEGGYGLIIPKEDGKTEKLEPLEVEPEKEPSIAE 311
[9][TOP]
>UniRef100_P19954 30S ribosomal protein 1, chloroplastic n=1 Tax=Spinacia oleracea
RepID=RR30_SPIOL
Length = 302
Score = 124 bits (312), Expect = 4e-27
Identities = 61/92 (66%), Positives = 75/92 (81%)
Frame = -3
Query: 530 SPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKE 351
+P+ E + + EVVRTKYFDMPPLT++EA+EQL NVDH FYAFRNEETG+INI+YKRKE
Sbjct: 212 APVSVEDDDFIEEVVRTKYFDMPPLTITEAVEQLENVDHDFYAFRNEETGDINILYKRKE 271
Query: 350 GGYGLIIPKGNGQAEKLEPLMVEPAREASLKE 255
GGYGLIIPK +G+ EKLE L V+ ++ S E
Sbjct: 272 GGYGLIIPK-DGKTEKLESLPVQTDKQPSFAE 302
[10][TOP]
>UniRef100_Q9FLV3 Similarity to ribosomal protein 30S subunit n=2 Tax=Arabidopsis
thaliana RepID=Q9FLV3_ARATH
Length = 365
Score = 124 bits (311), Expect = 5e-27
Identities = 65/100 (65%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Frame = -3
Query: 551 LEEDDDISPLEEEGEATLV-EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEI 375
+E+ D S EEE E L+ E+VRTK F+MPPLTV+EA+EQL V H FY F+NEETGEI
Sbjct: 266 VEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEI 325
Query: 374 NIVYKRKEGGYGLIIPKGNGQAEKLEPLMVEPAREASLKE 255
NIVYKRKEGGYGLIIPK +G+AEK+EPL E E S E
Sbjct: 326 NIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQLNEHSFAE 365
[11][TOP]
>UniRef100_C9EFD1 Chloroplast ribosomal protein (Fragment) n=1 Tax=Solanum tuberosum
RepID=C9EFD1_SOLTU
Length = 280
Score = 122 bits (306), Expect = 2e-26
Identities = 64/95 (67%), Positives = 73/95 (76%), Gaps = 6/95 (6%)
Frame = -3
Query: 551 LEEDDDISPLEEEGE------ATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNE 390
++ED + P EEE E + EVVR K FDMPPL+V+EAIEQL NVDH FY FRNE
Sbjct: 180 VQEDLETLPQEEEVEDDDKSDGFVTEVVRKKSFDMPPLSVNEAIEQLENVDHDFYGFRNE 239
Query: 389 ETGEINIVYKRKEGGYGLIIPKGNGQAEKLEPLMV 285
ETGEINIVY+RKEGGYGLIIPK +G+ EKLEPL V
Sbjct: 240 ETGEINIVYRRKEGGYGLIIPKEDGKTEKLEPLEV 274
[12][TOP]
>UniRef100_B9NGT0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NGT0_POPTR
Length = 71
Score = 121 bits (304), Expect = 3e-26
Identities = 60/71 (84%), Positives = 63/71 (88%)
Frame = -3
Query: 467 MPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPKGNGQAEKLEPLM 288
MPPLTVSEAIEQL NVDH FY FRNEETGEINIVYKRK GGYG IIPKGN +AE+LEPL+
Sbjct: 1 MPPLTVSEAIEQLENVDHDFYGFRNEETGEINIVYKRKAGGYGPIIPKGNYEAERLEPLV 60
Query: 287 VEPAREASLKE 255
VEPARE SL E
Sbjct: 61 VEPAREPSLAE 71
[13][TOP]
>UniRef100_Q84M68 Os03g0856500 protein n=3 Tax=Oryza sativa RepID=Q84M68_ORYSJ
Length = 309
Score = 108 bits (270), Expect = 3e-22
Identities = 48/72 (66%), Positives = 62/72 (86%)
Frame = -3
Query: 518 EEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYG 339
E+ + L +VVRTK F+MPPL+V EA+EQLVNVDH FYAFR+E+TGE+N++YKRKEGG+G
Sbjct: 223 EDEDTVLTKVVRTKVFEMPPLSVEEAMEQLVNVDHNFYAFRDEKTGEMNVLYKRKEGGFG 282
Query: 338 LIIPKGNGQAEK 303
LI+PKG+G K
Sbjct: 283 LIVPKGDGHLHK 294
[14][TOP]
>UniRef100_B6TYP8 Plastid-specific 30S ribosomal protein 1 n=1 Tax=Zea mays
RepID=B6TYP8_MAIZE
Length = 309
Score = 107 bits (266), Expect = 8e-22
Identities = 51/84 (60%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
Frame = -3
Query: 554 PLEEDD-DISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGE 378
P E DD + + E+ E L +VVRTK F+MPPLTV EA+EQL NVDH FY FR+E TG+
Sbjct: 196 PAEADDLEAAVGAEDEETVLAKVVRTKVFEMPPLTVEEALEQLENVDHDFYCFRDEATGQ 255
Query: 377 INIVYKRKEGGYGLIIPKGNGQAE 306
+NI+Y+RKEGGYGLIIPK +G+ +
Sbjct: 256 VNILYRRKEGGYGLIIPKNDGKVD 279
[15][TOP]
>UniRef100_B8LMC5 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LMC5_PICSI
Length = 321
Score = 102 bits (254), Expect = 2e-20
Identities = 52/94 (55%), Positives = 68/94 (72%), Gaps = 4/94 (4%)
Frame = -3
Query: 548 EEDDDISPLEEEGEATLV----EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETG 381
+E DD++ +EE + EVVRTKYF+MPP++ EA+EQL+NVDH FYAFRN E+G
Sbjct: 220 KELDDLADVEEMRYEKIDDLSDEVVRTKYFEMPPMSPEEALEQLMNVDHDFYAFRNMESG 279
Query: 380 EINIVYKRKEGGYGLIIPKGNGQAEKLEPLMVEP 279
E+N++YKRK GGYGLI+PK N + E P M P
Sbjct: 280 EVNVLYKRKHGGYGLIVPKNNERWE--NPTMEVP 311
[16][TOP]
>UniRef100_C5WRX8 Putative uncharacterized protein Sb01g000590 n=1 Tax=Sorghum
bicolor RepID=C5WRX8_SORBI
Length = 310
Score = 99.8 bits (247), Expect = 1e-19
Identities = 50/90 (55%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
Frame = -3
Query: 551 LEEDDDISPLEEEGEATLV-EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEI 375
+E D+ + + E E T+V +VVRTK F+MPPLTV EA+EQL NV H FY FR+E TG++
Sbjct: 199 VEADELAAAVGAEDEQTVVAKVVRTKVFEMPPLTVEEALEQLDNVGHNFYCFRDEATGQV 258
Query: 374 NIVYKRKEGGYGLIIPKGNGQAEKLEPLMV 285
NI+Y+RKEGGYGLIIPK +G + + + V
Sbjct: 259 NILYRRKEGGYGLIIPKEDGNFDNKDTVGV 288
[17][TOP]
>UniRef100_A9TA00 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9TA00_PHYPA
Length = 297
Score = 90.1 bits (222), Expect = 1e-16
Identities = 44/74 (59%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Frame = -3
Query: 536 DISP-LEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYK 360
D+ P LE + + EVVRTKYF+M P+ EA+EQLVNV H FYAFRN E+GEINI+YK
Sbjct: 211 DLDPILERKPDDLPDEVVRTKYFEMRPMKPLEALEQLVNVGHDFYAFRNVESGEINILYK 270
Query: 359 RKEGGYGLIIPKGN 318
R GGYG+I+P+ +
Sbjct: 271 RTHGGYGIIVPRND 284
[18][TOP]
>UniRef100_Q2JS19 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-3-3Ab RepID=Q2JS19_SYNJA
Length = 191
Score = 89.0 bits (219), Expect = 2e-16
Identities = 45/68 (66%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Frame = -3
Query: 527 PLEEEGEATLV-EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKE 351
PL E +A L EVVRTKYF MPP+TV EA+ QL VDH FY FRN E GEIN++Y RK
Sbjct: 122 PLNTERQAELPPEVVRTKYFAMPPMTVQEALHQLELVDHDFYVFRNIENGEINVIYVRKH 181
Query: 350 GGYGLIIP 327
GGYGLI P
Sbjct: 182 GGYGLIRP 189
[19][TOP]
>UniRef100_B8HK26 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7425 RepID=B8HK26_CYAP4
Length = 209
Score = 89.0 bits (219), Expect = 2e-16
Identities = 40/62 (64%), Positives = 48/62 (77%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPKGNG 315
EVVRTKYF MPP+T+ EA+EQL VDH FY FRN ETGEIN++Y+R GGYG+I P+
Sbjct: 130 EVVRTKYFAMPPMTLREALEQLELVDHDFYMFRNAETGEINVIYERNHGGYGVIQPRNGS 189
Query: 314 QA 309
A
Sbjct: 190 SA 191
[20][TOP]
>UniRef100_B2IVM1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nostoc
punctiforme PCC 73102 RepID=B2IVM1_NOSP7
Length = 214
Score = 89.0 bits (219), Expect = 2e-16
Identities = 41/61 (67%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK-GN 318
EVVRTKYF MPP+T++EA+EQL V H FY FRN ETGEIN++Y+R GGYG+I P+ GN
Sbjct: 131 EVVRTKYFSMPPMTLAEALEQLQLVGHDFYMFRNSETGEINVIYERNHGGYGVIHPRNGN 190
Query: 317 G 315
G
Sbjct: 191 G 191
[21][TOP]
>UniRef100_Q2JIS4 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-2-3B'a(2-13) RepID=Q2JIS4_SYNJB
Length = 190
Score = 88.6 bits (218), Expect = 3e-16
Identities = 44/69 (63%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = -3
Query: 527 PLEEEGEATL-VEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKE 351
PL E +A L EVVRTKYF MPP+TV EA+ QL VDH FY FRN E GEIN++Y R
Sbjct: 122 PLNTERQAELPAEVVRTKYFAMPPMTVQEALHQLELVDHDFYVFRNIENGEINVIYVRNH 181
Query: 350 GGYGLIIPK 324
GGYGLI P+
Sbjct: 182 GGYGLIRPR 190
[22][TOP]
>UniRef100_Q8YSA5 Light-repressed protein n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8YSA5_ANASP
Length = 213
Score = 87.8 bits (216), Expect = 5e-16
Identities = 39/59 (66%), Positives = 47/59 (79%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPKGN 318
EVVRTKYF MPP+TV+EA+EQL V H FY F N ETGEIN++Y+R GGYG+I P+ N
Sbjct: 132 EVVRTKYFSMPPMTVTEALEQLQLVGHDFYMFHNAETGEINVIYERNHGGYGVIQPRNN 190
[23][TOP]
>UniRef100_Q3M699 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Anabaena variabilis ATCC 29413 RepID=Q3M699_ANAVT
Length = 213
Score = 87.8 bits (216), Expect = 5e-16
Identities = 39/59 (66%), Positives = 47/59 (79%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPKGN 318
EVVRTKYF MPP+TV+EA+EQL V H FY F N ETGEIN++Y+R GGYG+I P+ N
Sbjct: 132 EVVRTKYFSMPPMTVTEALEQLQLVGHDFYMFHNAETGEINVIYERNHGGYGVIQPRNN 190
[24][TOP]
>UniRef100_A9RWK9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RWK9_PHYPA
Length = 221
Score = 87.8 bits (216), Expect = 5e-16
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
E+VRTKYF+M P+ EA+EQLVNV H FYAFRN E+GEINI+YKR GGYG+I+P+
Sbjct: 150 EIVRTKYFEMRPMKPLEALEQLVNVGHDFYAFRNVESGEINILYKRTHGGYGIIVPR 206
[25][TOP]
>UniRef100_A0ZCI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Nodularia spumigena CCY9414 RepID=A0ZCI5_NODSP
Length = 213
Score = 85.9 bits (211), Expect = 2e-15
Identities = 39/59 (66%), Positives = 46/59 (77%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPKGN 318
EVVRTKYF MPP+TV+EA EQL V H FY F N ETGEIN++Y+R GGYG+I P+ N
Sbjct: 132 EVVRTKYFSMPPMTVAEATEQLQLVGHDFYMFHNAETGEINVIYERNHGGYGVIQPRHN 190
[26][TOP]
>UniRef100_Q5N179 Light repressed protein A homolog n=1 Tax=Synechococcus elongatus
PCC 6301 RepID=Q5N179_SYNP6
Length = 207
Score = 84.3 bits (207), Expect = 5e-15
Identities = 37/64 (57%), Positives = 48/64 (75%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPKGNG 315
++VRTKYF MP +TV +A+ QL VDH FY FRN TGEIN++Y+R GGYG+I P+ G
Sbjct: 134 DIVRTKYFAMPAMTVEDALAQLQLVDHDFYMFRNAATGEINVIYERNHGGYGVIQPRPEG 193
Query: 314 QAEK 303
+EK
Sbjct: 194 NSEK 197
[27][TOP]
>UniRef100_Q31KN7 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Synechococcus elongatus PCC 7942 RepID=Q31KN7_SYNE7
Length = 207
Score = 84.3 bits (207), Expect = 5e-15
Identities = 37/64 (57%), Positives = 48/64 (75%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPKGNG 315
++VRTKYF MP +TV +A+ QL VDH FY FRN TGEIN++Y+R GGYG+I P+ G
Sbjct: 134 DIVRTKYFAMPAMTVEDALAQLQLVDHDFYMFRNAATGEINVIYERNHGGYGVIQPRPEG 193
Query: 314 QAEK 303
+EK
Sbjct: 194 NSEK 197
[28][TOP]
>UniRef100_B9YPU1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax='Nostoc
azollae' 0708 RepID=B9YPU1_ANAAZ
Length = 214
Score = 84.3 bits (207), Expect = 5e-15
Identities = 38/61 (62%), Positives = 47/61 (77%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPKGNG 315
EVVRTKYF MPP+T++EA EQL V H FY FRN ETGEIN++Y+R GGYG+I P+
Sbjct: 132 EVVRTKYFPMPPMTLAEAQEQLQLVGHDFYMFRNAETGEINVIYERNHGGYGVIQPRNGN 191
Query: 314 Q 312
+
Sbjct: 192 R 192
[29][TOP]
>UniRef100_Q7NMI0 Glr0786 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NMI0_GLOVI
Length = 187
Score = 84.0 bits (206), Expect = 7e-15
Identities = 37/66 (56%), Positives = 49/66 (74%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
+E+ A EVVRTKYF MPP++ EA++ L VDH F+ FRN E+GEIN++Y R GGY
Sbjct: 122 DEKATALPKEVVRTKYFAMPPMSPEEALDHLALVDHDFFVFRNAESGEINVLYARNHGGY 181
Query: 341 GLIIPK 324
GLI+P+
Sbjct: 182 GLIVPR 187
[30][TOP]
>UniRef100_Q8DKM6 LrtA protein n=1 Tax=Thermosynechococcus elongatus BP-1
RepID=Q8DKM6_THEEB
Length = 209
Score = 83.6 bits (205), Expect = 9e-15
Identities = 36/57 (63%), Positives = 45/57 (78%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
+VVR KYF MPP+T+ EA+E L VDH FY FRN +TGEIN+VY+R GGYG+I P+
Sbjct: 130 QVVRMKYFAMPPMTIQEALEHLEMVDHDFYVFRNRDTGEINVVYERNHGGYGVIQPR 186
[31][TOP]
>UniRef100_B4VJW0 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Microcoleus chthonoplastes PCC 7420
RepID=B4VJW0_9CYAN
Length = 215
Score = 83.2 bits (204), Expect = 1e-14
Identities = 39/61 (63%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK-GN 318
EVVR KYF MPP+T+ EA EQL VDH FY FRN +T EIN++Y+R GGYG+I P+ GN
Sbjct: 132 EVVRMKYFAMPPMTIEEATEQLQLVDHDFYMFRNAKTDEINVIYERNHGGYGVIQPRNGN 191
Query: 317 G 315
G
Sbjct: 192 G 192
[32][TOP]
>UniRef100_C7QW97 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Cyanothece RepID=C7QW97_CYAP0
Length = 205
Score = 82.4 bits (202), Expect = 2e-14
Identities = 35/59 (59%), Positives = 46/59 (77%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPKGN 318
EV+R KYF MPP+T+ EA+ QL VDH FY FRN++T EIN++Y+R GGYG+I P G+
Sbjct: 140 EVIRMKYFAMPPMTIDEALHQLELVDHDFYMFRNKDTDEINVIYQRNHGGYGVIQPHGS 198
[33][TOP]
>UniRef100_Q10ZL6 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZL6_TRIEI
Length = 215
Score = 82.0 bits (201), Expect = 3e-14
Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKR-KEGGYGLIIPKGN 318
EVVRTKYF MP +TV EA+EQL +DH FY F N TGEIN++YKR GGYGLI P+ N
Sbjct: 131 EVVRTKYFPMPSMTVEEALEQLQLIDHDFYMFSNGVTGEINVIYKRYHHGGYGLIQPRPN 190
Query: 317 G 315
G
Sbjct: 191 G 191
[34][TOP]
>UniRef100_B5VV76 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Arthrospira maxima CS-328 RepID=B5VV76_SPIMA
Length = 212
Score = 80.9 bits (198), Expect = 6e-14
Identities = 43/81 (53%), Positives = 53/81 (65%), Gaps = 9/81 (11%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRK-EGGYGLI----- 333
EVVRTKYF MPP+++ EA+EQL +DH FY FRN ET EIN++Y+R GGYG+I
Sbjct: 132 EVVRTKYFAMPPMSIQEALEQLQLIDHDFYMFRNAETDEINVIYQRSHHGGYGVIQPRNG 191
Query: 332 -IPKGNGQ--AEKLEPLMVEP 279
+P NGQ AE E P
Sbjct: 192 SVPTSNGQTGAELTERASTSP 212
[35][TOP]
>UniRef100_A0YIH4 Light-repressed protein n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0YIH4_9CYAN
Length = 212
Score = 80.5 bits (197), Expect = 8e-14
Identities = 37/60 (61%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKR-KEGGYGLIIPKGN 318
EVVRTKYF MPP+ + +A+EQL VDH FY F N +TGE+N++YKR GGYGLI P+ N
Sbjct: 132 EVVRTKYFAMPPMNLQDALEQLQLVDHDFYVFCNADTGELNVIYKRVNHGGYGLIQPRNN 191
[36][TOP]
>UniRef100_B4WNT9 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Synechococcus sp. PCC 7335 RepID=B4WNT9_9SYNE
Length = 224
Score = 78.6 bits (192), Expect = 3e-13
Identities = 36/62 (58%), Positives = 45/62 (72%)
Frame = -3
Query: 491 VVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPKGNGQ 312
VVR+KYF MPP+TV A+E L V H FY FRN ETGEIN++Y+R GYGL+ P+ N Q
Sbjct: 141 VVRSKYFAMPPMTVQTALENLELVGHDFYMFRNVETGEINVIYERNHKGYGLLQPRQNHQ 200
Query: 311 AE 306
+
Sbjct: 201 TK 202
[37][TOP]
>UniRef100_B7KLI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7424 RepID=B7KLI5_CYAP7
Length = 199
Score = 77.4 bits (189), Expect = 7e-13
Identities = 33/57 (57%), Positives = 44/57 (77%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
EVVR KYF MPP+++ EA+EQL VDH F+ FRN +T EIN++Y R GG+G+I P+
Sbjct: 133 EVVRMKYFGMPPMSIDEALEQLQLVDHDFFMFRNRDTNEINVIYIRNHGGFGVIQPR 189
[38][TOP]
>UniRef100_P47908 Light repressed protein A n=1 Tax=Synechococcus sp. PCC 7002
RepID=LRTA_SYNP2
Length = 193
Score = 77.0 bits (188), Expect = 9e-13
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
EVVR KYF MPP+T+ EA+EQL VDH FY F N++T IN++Y R GGYG+I P+
Sbjct: 133 EVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDTNAINVIYIRNHGGYGVIQPR 189
[39][TOP]
>UniRef100_B1WZE1 Light repressed protein n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WZE1_CYAA5
Length = 201
Score = 76.6 bits (187), Expect = 1e-12
Identities = 33/64 (51%), Positives = 46/64 (71%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPKGNG 315
EV+R KYF MPP+++ EA QL VDH FY FRN++T EIN++Y R GG+G+I P+
Sbjct: 135 EVIRMKYFAMPPMSIEEAKHQLELVDHDFYMFRNQDTDEINVIYMRNHGGFGVIQPREPN 194
Query: 314 QAEK 303
+ +K
Sbjct: 195 ENDK 198
[40][TOP]
>UniRef100_B0JSS1 Light repressed protein A homolog n=1 Tax=Microcystis aeruginosa
NIES-843 RepID=B0JSS1_MICAN
Length = 199
Score = 76.6 bits (187), Expect = 1e-12
Identities = 33/57 (57%), Positives = 44/57 (77%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
EVVR KYF MPP+T+ EA+ QL VDH FY F N++T EIN++Y+R GG+G+I P+
Sbjct: 133 EVVRMKYFAMPPMTIEEALTQLQLVDHDFYMFCNKDTNEINVIYQRNHGGFGVIQPR 189
[41][TOP]
>UniRef100_P74518 Light repressed protein A homolog n=1 Tax=Synechocystis sp. PCC
6803 RepID=LRTA_SYNY3
Length = 191
Score = 76.6 bits (187), Expect = 1e-12
Identities = 33/56 (58%), Positives = 43/56 (76%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIP 327
EV+R KYF MPP+ + +A+EQL VDH FY FRN++T EIN++Y R GGYG+I P
Sbjct: 132 EVLRMKYFAMPPMAIEDALEQLQLVDHDFYMFRNKDTDEINVIYIRNHGGYGVIQP 187
[42][TOP]
>UniRef100_B4AWR2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7822 RepID=B4AWR2_9CHRO
Length = 199
Score = 75.5 bits (184), Expect = 2e-12
Identities = 34/57 (59%), Positives = 42/57 (73%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
EVVR KYF MP +++ EA+EQL VDH FY FRN T EIN++Y R GGYG+I P+
Sbjct: 133 EVVRMKYFAMPLMSIEEALEQLQLVDHDFYMFRNRNTNEINVIYIRNHGGYGVIQPR 189
[43][TOP]
>UniRef100_A3IRI7 Light repressed protein n=1 Tax=Cyanothece sp. CCY0110
RepID=A3IRI7_9CHRO
Length = 199
Score = 75.5 bits (184), Expect = 2e-12
Identities = 32/57 (56%), Positives = 43/57 (75%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
EV+R KYF MPP+++ EA QL VDH FY FRN++T EIN++Y R GG+G+I P+
Sbjct: 133 EVIRMKYFAMPPMSIEEAKHQLELVDHDFYMFRNQDTDEINVIYMRNHGGFGVIQPR 189
[44][TOP]
>UniRef100_A8YEZ8 LrtA protein n=1 Tax=Microcystis aeruginosa PCC 7806
RepID=A8YEZ8_MICAE
Length = 199
Score = 75.1 bits (183), Expect = 3e-12
Identities = 32/57 (56%), Positives = 44/57 (77%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
EVVR KYF MPP+T+ EA+ QL VDH F+ F N++T EIN++Y+R GG+G+I P+
Sbjct: 133 EVVRMKYFAMPPMTIEEALTQLQLVDHDFFMFCNKDTNEINVIYQRNHGGFGVIQPR 189
[45][TOP]
>UniRef100_B0CDL4 High light inducible protein n=1 Tax=Acaryochloris marina MBIC11017
RepID=B0CDL4_ACAM1
Length = 212
Score = 73.9 bits (180), Expect = 7e-12
Identities = 31/57 (54%), Positives = 44/57 (77%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
EVVR KYF + P++V +A+EQL VDH FY F N +TG++N++Y+R GGYG+I P+
Sbjct: 138 EVVRCKYFAISPMSVHDALEQLDLVDHDFYVFENADTGQLNVIYERNHGGYGVIQPR 194
[46][TOP]
>UniRef100_A5GUZ2 Light repressed protein A homolog n=1 Tax=Synechococcus sp. RCC307
RepID=A5GUZ2_SYNR3
Length = 187
Score = 73.9 bits (180), Expect = 7e-12
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = -3
Query: 491 VVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLI 333
VVR KYF MPP++V EAI QL +DH FY FRN + GE+ +VY+R GGYG+I
Sbjct: 131 VVRRKYFAMPPMSVEEAIHQLEVIDHDFYVFRNADNGELQVVYQRNHGGYGVI 183
[47][TOP]
>UniRef100_Q4CAE1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Crocosphaera watsonii WH 8501 RepID=Q4CAE1_CROWT
Length = 199
Score = 73.6 bits (179), Expect = 9e-12
Identities = 32/57 (56%), Positives = 42/57 (73%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
EV+R KYF MP +++ EA QL VDH FY FRN+ET EIN++Y R GG+G+I P+
Sbjct: 133 EVIRMKYFAMPSMSIEEAKHQLELVDHDFYMFRNQETEEINVIYMRNHGGFGIIQPR 189
[48][TOP]
>UniRef100_Q1AVJ5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ5_RUBXD
Length = 189
Score = 72.0 bits (175), Expect = 3e-11
Identities = 33/74 (44%), Positives = 48/74 (64%)
Frame = -3
Query: 548 EEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINI 369
EE++DI P +VRTK F M P++ EA+ Q+ +DH F+ F N +TG+IN+
Sbjct: 124 EEEEDIEP----------RIVRTKQFQMKPMSAEEAVLQMELLDHDFFVFTNADTGDINV 173
Query: 368 VYKRKEGGYGLIIP 327
VY+R++G YGLI P
Sbjct: 174 VYRRRDGNYGLIEP 187
[49][TOP]
>UniRef100_C4L5L1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Exiguobacterium sp. AT1b RepID=C4L5L1_EXISA
Length = 187
Score = 70.5 bits (171), Expect = 8e-11
Identities = 36/76 (47%), Positives = 50/76 (65%)
Frame = -3
Query: 551 LEEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEIN 372
LE DD + +E EA L E+VRTK F + P+ EAI Q+ + H+F+ F + ETG N
Sbjct: 113 LEGPDDTPAVYDEDEAEL-ELVRTKRFTLKPMDTEEAILQMDMLGHSFFVFSDAETGNTN 171
Query: 371 IVYKRKEGGYGLIIPK 324
+VY+RK+G YGLI P+
Sbjct: 172 VVYRRKDGKYGLIEPE 187
[50][TOP]
>UniRef100_B5IMZ9 Light repressed protein n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5IMZ9_9CHRO
Length = 195
Score = 70.5 bits (171), Expect = 8e-11
Identities = 30/55 (54%), Positives = 40/55 (72%)
Frame = -3
Query: 488 VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
VR KYF MPP+++ EA+ QL +DH FY FR E+G+I +VY R GG+G+I PK
Sbjct: 139 VRRKYFAMPPMSLDEALHQLELIDHDFYVFREAESGQIQVVYHRNHGGFGVIQPK 193
[51][TOP]
>UniRef100_Q8XIE9 30S ribosomal protein S30AE family n=1 Tax=Clostridium perfringens
RepID=Q8XIE9_CLOPE
Length = 179
Score = 70.1 bits (170), Expect = 1e-10
Identities = 30/69 (43%), Positives = 47/69 (68%)
Frame = -3
Query: 533 ISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRK 354
I P+E+ E ++V+TK FD+ P+ EA+ Q+ + H F+ F++ ET ++N+VYKRK
Sbjct: 106 IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLNVVYKRK 165
Query: 353 EGGYGLIIP 327
+G YGLI P
Sbjct: 166 DGNYGLIEP 174
[52][TOP]
>UniRef100_Q0SR10 Ribosomal subunit interface protein n=1 Tax=Clostridium perfringens
SM101 RepID=Q0SR10_CLOPS
Length = 179
Score = 70.1 bits (170), Expect = 1e-10
Identities = 30/69 (43%), Positives = 47/69 (68%)
Frame = -3
Query: 533 ISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRK 354
I P+E+ E ++V+TK FD+ P+ EA+ Q+ + H F+ F++ ET ++N+VYKRK
Sbjct: 106 IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLNVVYKRK 165
Query: 353 EGGYGLIIP 327
+G YGLI P
Sbjct: 166 DGNYGLIEP 174
[53][TOP]
>UniRef100_Q0TND9 Ribosomal subunit interface protein n=6 Tax=Clostridium perfringens
RepID=Q0TND9_CLOP1
Length = 179
Score = 70.1 bits (170), Expect = 1e-10
Identities = 30/69 (43%), Positives = 47/69 (68%)
Frame = -3
Query: 533 ISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRK 354
I P+E+ E ++V+TK FD+ P+ EA+ Q+ + H F+ F++ ET ++N+VYKRK
Sbjct: 106 IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLNVVYKRK 165
Query: 353 EGGYGLIIP 327
+G YGLI P
Sbjct: 166 DGNYGLIEP 174
[54][TOP]
>UniRef100_B1YLH2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Exiguobacterium sibiricum 255-15 RepID=B1YLH2_EXIS2
Length = 187
Score = 69.7 bits (169), Expect = 1e-10
Identities = 36/76 (47%), Positives = 50/76 (65%)
Frame = -3
Query: 551 LEEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEIN 372
LE + +P+ EE EA L E+VRTK F + P+ EAI Q+ + H F+ F + ETG N
Sbjct: 113 LEGPEAEAPVYEEDEAEL-ELVRTKRFTLKPMDTEEAILQMDMLGHTFFVFSDAETGNTN 171
Query: 371 IVYKRKEGGYGLIIPK 324
+VY+RK+G YGLI P+
Sbjct: 172 VVYRRKDGRYGLIEPE 187
[55][TOP]
>UniRef100_Q7XYJ6 Ribosomal protein rpS22 (Fragment) n=1 Tax=Bigelowiella natans
RepID=Q7XYJ6_BIGNA
Length = 170
Score = 69.7 bits (169), Expect = 1e-10
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Frame = -3
Query: 551 LEEDDDISPLE----EEGEATL--VEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNE 390
++ DD+ E EG A + V VVR K F MPP+++ +A L +DH FY FRN
Sbjct: 87 VQGQDDVQQEEYSGIPEGYAPVEDVSVVRRKKFPMPPISIEDATLCLDYLDHDFYVFRNS 146
Query: 389 ETGEINIVYKRKEGGYGLIIPK 324
ET EIN+VY+R EGG GLI P+
Sbjct: 147 ETKEINVVYRRAEGGVGLIEPE 168
[56][TOP]
>UniRef100_A3DJE4 Sigma 54 modulation protein / SSU ribosomal protein S30P n=3
Tax=Clostridium thermocellum RepID=A3DJE4_CLOTH
Length = 177
Score = 69.3 bits (168), Expect = 2e-10
Identities = 38/73 (52%), Positives = 49/73 (67%)
Frame = -3
Query: 542 DDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVY 363
DDD +EEE + EVVRTK F + P+TV EAI Q+ + H F+ F N ET E N+VY
Sbjct: 109 DDD--EVEEEPK---FEVVRTKKFAIKPMTVEEAILQMNLLGHQFFMFSNAETNEANVVY 163
Query: 362 KRKEGGYGLIIPK 324
+RK+G YGLI P+
Sbjct: 164 RRKDGNYGLIEPE 176
[57][TOP]
>UniRef100_Q3AZ51 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Synechococcus sp. CC9902 RepID=Q3AZ51_SYNS9
Length = 195
Score = 68.9 bits (167), Expect = 2e-10
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Frame = -3
Query: 548 EEDDDISPLE----EEGEATLVEV-VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEET 384
EE D S +E + EA L E VR KYF MPP+T+ +A QL +DH FY FR+ +T
Sbjct: 115 EEVSDESAVEGSLVDGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFYLFRDSKT 174
Query: 383 GEINIVYKRKEGGYGLI 333
G++ ++Y+R GGYG+I
Sbjct: 175 GDLQVIYRRNHGGYGVI 191
[58][TOP]
>UniRef100_A2BV60 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9515 RepID=A2BV60_PROM5
Length = 194
Score = 68.9 bits (167), Expect = 2e-10
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = -3
Query: 536 DISPLEEEGEATLVEV-VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYK 360
D + ++ EA L E ++ KYF+M P+++ EA +QL +DH FY FRN++ E+ ++YK
Sbjct: 123 DKNIFNDKREAKLPEPSIKNKYFEMIPISLEEARKQLDLIDHDFYVFRNKKNNELQVIYK 182
Query: 359 RKEGGYGLIIPK 324
RK GGYGLI K
Sbjct: 183 RKHGGYGLIQSK 194
[59][TOP]
>UniRef100_C4G2X0 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC
49176 RepID=C4G2X0_ABIDE
Length = 175
Score = 68.9 bits (167), Expect = 2e-10
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
+++ E V+V+RTK F + P+ EA Q+ ++H+FY FRN ET E+N+VYKRK G Y
Sbjct: 109 DDDYEDEDVKVIRTKRFAVKPMDPEEACVQMELLNHSFYVFRNAETDEVNVVYKRKNGDY 168
Query: 341 GLIIPK 324
GLI P+
Sbjct: 169 GLIEPE 174
[60][TOP]
>UniRef100_Q7V2R9 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
subsp. pastoris str. CCMP1986 RepID=Q7V2R9_PROMP
Length = 194
Score = 68.6 bits (166), Expect = 3e-10
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Frame = -3
Query: 551 LEEDDDISP--LEEEGEATLVEV-VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETG 381
+EE D I EE E L E ++ KYF+M P+++ EA +QL +DH FY FRN+
Sbjct: 116 IEESDSIDKDIFNEEREVRLPEPSIKKKYFEMIPISLEEARKQLDFIDHDFYLFRNKLNN 175
Query: 380 EINIVYKRKEGGYGLIIPK 324
E+ ++YKR GGYGLI K
Sbjct: 176 ELQVIYKRNHGGYGLIQSK 194
[61][TOP]
>UniRef100_A4CWK2 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 7805
RepID=A4CWK2_SYNPV
Length = 195
Score = 68.6 bits (166), Expect = 3e-10
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = -3
Query: 488 VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPKG 321
VR KYF MPP+T+ +A +QL +DH FY FR+ ++GE+ ++Y R GGYG+I +G
Sbjct: 140 VRRKYFAMPPMTLEQARQQLDLIDHDFYVFRDSDSGELQVIYHRNHGGYGVIEARG 195
[62][TOP]
>UniRef100_UPI00006DCB57 hypothetical protein CdifQ_04002839 n=1 Tax=Clostridium difficile
QCD-32g58 RepID=UPI00006DCB57
Length = 138
Score = 68.2 bits (165), Expect = 4e-10
Identities = 37/71 (52%), Positives = 47/71 (66%)
Frame = -3
Query: 545 EDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIV 366
E DD +EE E ++E R K F++ P++ EAI Q+ V H FY FRN++ EINIV
Sbjct: 67 EFDDYDYDDEEDENIVIE--RRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEINIV 124
Query: 365 YKRKEGGYGLI 333
YKRK GGYGLI
Sbjct: 125 YKRKAGGYGLI 135
[63][TOP]
>UniRef100_C9XLM7 Putative sigma 54 modulation protein n=3 Tax=Clostridium difficile
RepID=C9XLM7_CLODI
Length = 187
Score = 68.2 bits (165), Expect = 4e-10
Identities = 37/71 (52%), Positives = 47/71 (66%)
Frame = -3
Query: 545 EDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIV 366
E DD +EE E ++E R K F++ P++ EAI Q+ V H FY FRN++ EINIV
Sbjct: 116 EFDDYDYDDEEDENIVIE--RRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEINIV 173
Query: 365 YKRKEGGYGLI 333
YKRK GGYGLI
Sbjct: 174 YKRKAGGYGLI 184
[64][TOP]
>UniRef100_A2BPM8 Light repressed protein A n=1 Tax=Prochlorococcus marinus str.
AS9601 RepID=A2BPM8_PROMS
Length = 194
Score = 67.8 bits (164), Expect = 5e-10
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = -3
Query: 536 DISPLEEEGEATLVEV-VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYK 360
D + +E EA+L E ++ KYF+M P++ EA +QL +DH FY FRN++ E+ ++YK
Sbjct: 123 DKALFKEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDFYVFRNKKNNELQVIYK 182
Query: 359 RKEGGYGLIIPK 324
R GGYGLI K
Sbjct: 183 RNHGGYGLIQSK 194
[65][TOP]
>UniRef100_B7A6F1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Thermus
aquaticus Y51MC23 RepID=B7A6F1_THEAQ
Length = 186
Score = 67.8 bits (164), Expect = 5e-10
Identities = 33/67 (49%), Positives = 44/67 (65%)
Frame = -3
Query: 527 PLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEG 348
P EEEG +VR K F+M P+ EA+ Q+ + H F+ FRN +T EIN+VY+RK+G
Sbjct: 123 PEEEEGP----RIVRVKRFEMKPMDPEEAVFQMEALGHDFFVFRNAKTDEINVVYRRKDG 178
Query: 347 GYGLIIP 327
YGLI P
Sbjct: 179 NYGLIEP 185
[66][TOP]
>UniRef100_A1HT12 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Thermosinus carboxydivorans Nor1 RepID=A1HT12_9FIRM
Length = 174
Score = 67.8 bits (164), Expect = 5e-10
Identities = 30/63 (47%), Positives = 44/63 (69%)
Frame = -3
Query: 512 GEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLI 333
GE+ VV+TK F + P+ V EAI Q+ ++H FY F N ET ++N++Y+RK+G YGLI
Sbjct: 111 GESEDFRVVKTKRFPVKPMDVEEAIMQMNLINHDFYVFMNAETEQVNVIYRRKDGNYGLI 170
Query: 332 IPK 324
P+
Sbjct: 171 EPE 173
[67][TOP]
>UniRef100_Q8ENI5 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis
RepID=Q8ENI5_OCEIH
Length = 185
Score = 67.4 bits (163), Expect = 7e-10
Identities = 29/65 (44%), Positives = 46/65 (70%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
E+E + +E+VRTK F++ P+ EAI Q+ + H F+ F N+++GE N+VY+R++G Y
Sbjct: 119 EDEEDENQLEIVRTKRFNLKPMDSEEAILQMDMLGHEFFVFTNDDSGETNVVYRRRDGKY 178
Query: 341 GLIIP 327
GLI P
Sbjct: 179 GLIEP 183
[68][TOP]
>UniRef100_Q31CD8 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Prochlorococcus marinus str. MIT 9312
RepID=Q31CD8_PROM9
Length = 194
Score = 67.4 bits (163), Expect = 7e-10
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Frame = -3
Query: 554 PLEEDD----DISPLEEEGEATLVEV-VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNE 390
P+E D D + ++ EA+L E ++ KYF+M P++ EA +QL +DH FY FRN+
Sbjct: 113 PIESADSNVLDKTLFKQGREASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRNK 172
Query: 389 ETGEINIVYKRKEGGYGLIIPK 324
+ E+ ++YKR GGYGLI K
Sbjct: 173 KNNELQVIYKRNHGGYGLIQSK 194
[69][TOP]
>UniRef100_A3PBB8 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9301 RepID=A3PBB8_PROM0
Length = 194
Score = 67.4 bits (163), Expect = 7e-10
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Frame = -3
Query: 521 EEEGEATLVEV-VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGG 345
+E EA+L E ++ KYF+M P++ EA +QL +DH FY FRN++ E+ ++YKR GG
Sbjct: 128 KEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDFYVFRNKKNNELQVIYKRNHGG 187
Query: 344 YGLIIPK 324
YGLI K
Sbjct: 188 YGLIQSK 194
[70][TOP]
>UniRef100_C6Q3Y9 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Thermoanaerobacter mathranii subsp. mathranii str.
A3 RepID=C6Q3Y9_9THEO
Length = 181
Score = 67.4 bits (163), Expect = 7e-10
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
+EE E T E+V+TK F + P++ EAI Q+ + H F+ F N +T IN+VYKRK+G Y
Sbjct: 115 KEEEEETSFEIVKTKRFPIKPMSAEEAILQMNLLGHNFFVFTNADTDTINVVYKRKDGKY 174
Query: 341 GLIIP 327
GLI P
Sbjct: 175 GLIEP 179
[71][TOP]
>UniRef100_C6PFL3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Thermoanaerobacter italicus Ab9 RepID=C6PFL3_9THEO
Length = 181
Score = 67.4 bits (163), Expect = 7e-10
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
+EE E T E+V+TK F + P++ EAI Q+ + H F+ F N +T IN+VYKRK+G Y
Sbjct: 115 KEEEEETSFEIVKTKRFPIKPMSAEEAILQMNLLGHNFFVFTNADTDTINVVYKRKDGKY 174
Query: 341 GLIIP 327
GLI P
Sbjct: 175 GLIEP 179
[72][TOP]
>UniRef100_A3YVD7 Light repressed protein A-like protein n=1 Tax=Synechococcus sp. WH
5701 RepID=A3YVD7_9SYNE
Length = 195
Score = 67.4 bits (163), Expect = 7e-10
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = -3
Query: 497 VEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
V VR KYF MP +++ +A+ QL +DH FY FR E +G + +VY+R GG+G+I PK
Sbjct: 136 VPAVRRKYFSMPAMSLDQALHQLELIDHDFYVFREESSGGLQVVYRRNHGGFGVIQPK 193
[73][TOP]
>UniRef100_B9NHV3 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NHV3_POPTR
Length = 51
Score = 67.4 bits (163), Expect = 7e-10
Identities = 40/71 (56%), Positives = 42/71 (59%)
Frame = -3
Query: 467 MPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPKGNGQAEKLEPLM 288
MPPLTV EAIEQL NVDHAFY FRNEET NG A +LE L+
Sbjct: 1 MPPLTVDEAIEQLENVDHAFYGFRNEET--------------------ENGSAGQLELLV 40
Query: 287 VEPAREASLKE 255
VEPARE SL E
Sbjct: 41 VEPAREPSLVE 51
[74][TOP]
>UniRef100_Q5SIS0 Ribosomal subunit interface protein n=2 Tax=Thermus thermophilus
RepID=Q5SIS0_THET8
Length = 186
Score = 67.0 bits (162), Expect = 9e-10
Identities = 32/67 (47%), Positives = 44/67 (65%)
Frame = -3
Query: 527 PLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEG 348
P EEEG +VR K F+M P+ EA Q+ + H+F+ FRN +T EIN++Y+RK+G
Sbjct: 123 PEEEEGP----RIVRVKRFEMKPMDPEEAAFQMEALGHSFFVFRNAKTDEINVIYRRKDG 178
Query: 347 GYGLIIP 327
YGLI P
Sbjct: 179 NYGLIEP 185
[75][TOP]
>UniRef100_A7NNI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Roseiflexus castenholzii DSM 13941
RepID=A7NNI5_ROSCS
Length = 198
Score = 67.0 bits (162), Expect = 9e-10
Identities = 27/69 (39%), Positives = 51/69 (73%)
Frame = -3
Query: 530 SPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKE 351
+P++EE + +VRTK F + P+ EA+EQ+ + H+F+ F++ +TG++N++Y+R++
Sbjct: 129 APIDEEEQRP--RIVRTKEFQVKPMYSDEAVEQMELLGHSFFIFQDADTGKLNVLYRRQD 186
Query: 350 GGYGLIIPK 324
G YGLI+P+
Sbjct: 187 GNYGLIVPE 195
[76][TOP]
>UniRef100_A2CBL6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9303 RepID=A2CBL6_PROM3
Length = 195
Score = 67.0 bits (162), Expect = 9e-10
Identities = 27/52 (51%), Positives = 39/52 (75%)
Frame = -3
Query: 488 VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLI 333
VR KYF MPP++V +A QL +DH FY FR +E+G++ ++Y+R GGYG+I
Sbjct: 140 VRRKYFAMPPMSVEQARHQLDLIDHDFYLFREQESGQLQVIYRRNHGGYGVI 191
[77][TOP]
>UniRef100_A8G3B2 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus str.
MIT 9215 RepID=A8G3B2_PROM2
Length = 194
Score = 66.6 bits (161), Expect = 1e-09
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = -3
Query: 536 DISPLEEEGEATLVEV-VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYK 360
D + L++ EA+L E ++ KYF+M P++ EA +QL +DH FY FRN + E+ ++YK
Sbjct: 123 DEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRNNKNNELQVIYK 182
Query: 359 RKEGGYGLIIPK 324
R GGYGLI K
Sbjct: 183 RNHGGYGLIQSK 194
[78][TOP]
>UniRef100_A6TLE5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Alkaliphilus metalliredigens QYMF RepID=A6TLE5_ALKMQ
Length = 177
Score = 66.6 bits (161), Expect = 1e-09
Identities = 31/72 (43%), Positives = 47/72 (65%)
Frame = -3
Query: 539 DDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYK 360
++I E+ ++ ++V+TK F M P+ EA+ Q+ + H FY F N ET E+N+VYK
Sbjct: 105 ENIPTYVEDVDSDESKIVKTKRFAMKPMHSEEAVLQMELIGHNFYMFANAETDEVNVVYK 164
Query: 359 RKEGGYGLIIPK 324
RK+G YGLI P+
Sbjct: 165 RKDGNYGLIEPE 176
[79][TOP]
>UniRef100_Q2B1U0 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. NRRL
B-14911 RepID=Q2B1U0_9BACI
Length = 184
Score = 66.6 bits (161), Expect = 1e-09
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = -3
Query: 542 DDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVY 363
D+ +P+ EE + L EVVR K FD+ P+ EAI Q+ + H+FY F N ET N+VY
Sbjct: 113 DEPEAPVLEEEDNDL-EVVRQKSFDLKPMDNEEAILQMNLLGHSFYVFTNAETNRTNVVY 171
Query: 362 KRKEGGYGLI 333
KRK+G YGLI
Sbjct: 172 KRKDGRYGLI 181
[80][TOP]
>UniRef100_B9P0E9 Light repressed protein A n=1 Tax=Prochlorococcus marinus str. MIT
9202 RepID=B9P0E9_PROMA
Length = 194
Score = 66.6 bits (161), Expect = 1e-09
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = -3
Query: 536 DISPLEEEGEATLVEV-VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYK 360
D + L++ EA+L E ++ KYF+M P++ EA +QL +DH FY FRN + E+ ++YK
Sbjct: 123 DEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRNSKNNELQVIYK 182
Query: 359 RKEGGYGLIIPK 324
R GGYGLI K
Sbjct: 183 RNHGGYGLIQSK 194
[81][TOP]
>UniRef100_Q8RCC0 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Thermoanaerobacter
tengcongensis RepID=Q8RCC0_THETN
Length = 184
Score = 66.2 bits (160), Expect = 2e-09
Identities = 32/65 (49%), Positives = 43/65 (66%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
+ E E T E+V+TK F + P++ EAI Q+ + H F+ F N ET IN+VYKRK+G Y
Sbjct: 116 KREEEETSFEIVKTKRFPIKPMSPEEAILQMNLLGHTFFVFTNAETDMINVVYKRKDGKY 175
Query: 341 GLIIP 327
GLI P
Sbjct: 176 GLIEP 180
[82][TOP]
>UniRef100_Q7V8W0 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
str. MIT 9313 RepID=Q7V8W0_PROMM
Length = 195
Score = 66.2 bits (160), Expect = 2e-09
Identities = 27/52 (51%), Positives = 39/52 (75%)
Frame = -3
Query: 488 VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLI 333
VR KYF MPP++V +A QL +DH FY FR +E+G++ ++Y+R GGYG+I
Sbjct: 140 VRRKYFAMPPMSVEQARYQLDLIDHDFYLFREQESGQLQVIYRRNHGGYGVI 191
[83][TOP]
>UniRef100_A7GUW3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Bacillus cytotoxicus NVH 391-98 RepID=A7GUW3_BACCN
Length = 179
Score = 66.2 bits (160), Expect = 2e-09
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
+EE + +E+VRTK FD+ P+ V EAI Q+ + H F+ F N +T E NIVY RK+G Y
Sbjct: 114 QEEVQEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNIVYGRKDGKY 173
Query: 341 GLIIPK 324
GLI K
Sbjct: 174 GLIEAK 179
[84][TOP]
>UniRef100_A5GJ89 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GJ89_SYNPW
Length = 195
Score = 66.2 bits (160), Expect = 2e-09
Identities = 26/52 (50%), Positives = 39/52 (75%)
Frame = -3
Query: 488 VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLI 333
VR KYF MPP+T+ +A +QL +DH FY FR+ +G++ ++Y+R GGYG+I
Sbjct: 140 VRRKYFSMPPMTLEQARQQLDLIDHDFYLFRDSASGDLQVIYRRNHGGYGVI 191
[85][TOP]
>UniRef100_C6J2M0 Ribosomal subunit interface protein n=1 Tax=Paenibacillus sp. oral
taxon 786 str. D14 RepID=C6J2M0_9BACL
Length = 183
Score = 66.2 bits (160), Expect = 2e-09
Identities = 34/62 (54%), Positives = 43/62 (69%)
Frame = -3
Query: 518 EEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYG 339
+EGE L EVVRTK F + P+ V EAI Q+ V H F+ F N +T E+N+VYKR +G YG
Sbjct: 120 DEGEEEL-EVVRTKRFTLKPMDVEEAILQMNMVGHNFFVFSNIDTKEVNVVYKRNDGKYG 178
Query: 338 LI 333
LI
Sbjct: 179 LI 180
[86][TOP]
>UniRef100_A7VXE1 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753
RepID=A7VXE1_9CLOT
Length = 183
Score = 66.2 bits (160), Expect = 2e-09
Identities = 32/75 (42%), Positives = 49/75 (65%)
Frame = -3
Query: 551 LEEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEIN 372
L ++ + + EEE E ++ R K+F + PL V EAI Q+ + H F+ F+N ETG++N
Sbjct: 107 LAQETEEASAEEEAEGDY-KIERIKHFALKPLLVEEAILQMNMIGHQFFMFQNMETGDVN 165
Query: 371 IVYKRKEGGYGLIIP 327
+VY RK+G YGL+ P
Sbjct: 166 VVYVRKDGTYGLLEP 180
[87][TOP]
>UniRef100_UPI00017F5ACC putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
ATCC 43255 RepID=UPI00017F5ACC
Length = 185
Score = 65.9 bits (159), Expect = 2e-09
Identities = 34/63 (53%), Positives = 44/63 (69%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
+EE E ++E R K F++ P++ EAI Q+ V H FY FRN++ EINIVYKRK GGY
Sbjct: 122 DEEDENIVIE--RRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEINIVYKRKAGGY 179
Query: 341 GLI 333
GLI
Sbjct: 180 GLI 182
[88][TOP]
>UniRef100_UPI0001794B34 hypothetical protein CLOSPO_00786 n=1 Tax=Clostridium sporogenes
ATCC 15579 RepID=UPI0001794B34
Length = 175
Score = 65.9 bits (159), Expect = 2e-09
Identities = 28/68 (41%), Positives = 46/68 (67%)
Frame = -3
Query: 527 PLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEG 348
P E GE ++V+TK F M P++ EA+ Q+ + H F+ ++N +T E+N++Y+RK+G
Sbjct: 107 PDYESGENKETQIVKTKKFAMKPMSSEEAVLQMELLGHNFFVYQNADTEEVNVIYRRKDG 166
Query: 347 GYGLIIPK 324
YGLI P+
Sbjct: 167 NYGLIEPE 174
[89][TOP]
>UniRef100_Q5WDF7 Ribosomal protein S30EA n=1 Tax=Bacillus clausii KSM-K16
RepID=Q5WDF7_BACSK
Length = 184
Score = 65.9 bits (159), Expect = 2e-09
Identities = 32/73 (43%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = -3
Query: 539 DDISPLEEE-GEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVY 363
+++ PL +E E +EVVRTK F++ P+ EAI Q+ + H F+ F + E+G N+VY
Sbjct: 111 NELEPLRDEVAEDDELEVVRTKRFNLKPMDAEEAILQMDLLGHNFFVFSDAESGSTNVVY 170
Query: 362 KRKEGGYGLIIPK 324
+RK+G YGLI P+
Sbjct: 171 RRKDGKYGLIEPE 183
[90][TOP]
>UniRef100_C0Z6T8 Putative uncharacterized protein yvyD n=1 Tax=Brevibacillus brevis
NBRC 100599 RepID=C0Z6T8_BREBN
Length = 185
Score = 65.9 bits (159), Expect = 2e-09
Identities = 25/58 (43%), Positives = 43/58 (74%)
Frame = -3
Query: 497 VEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
+++VRTK FD+ P+ EA+ Q+ + H+F+ F+N +T ++++VY+R +G YGLI PK
Sbjct: 128 IDIVRTKRFDLKPMDAQEAVMQMDMLGHSFFVFQNSDTNDVSVVYRRNDGRYGLIEPK 185
[91][TOP]
>UniRef100_B2A816 Sigma 54 modulation protein, SSU ribosomal protein S30P n=1
Tax=Natranaerobius thermophilus JW/NM-WN-LF
RepID=B2A816_NATTJ
Length = 178
Score = 65.9 bits (159), Expect = 2e-09
Identities = 31/65 (47%), Positives = 45/65 (69%)
Frame = -3
Query: 518 EEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYG 339
EEG+ E+V+TK F + P+T EA+ Q+ + H F+ FRN ET E+N+VY+RK+G YG
Sbjct: 115 EEGKDP--EIVKTKRFAIKPMTPEEAVLQMELIGHDFFVFRNAETEEVNVVYRRKDGNYG 172
Query: 338 LIIPK 324
I P+
Sbjct: 173 QIEPE 177
[92][TOP]
>UniRef100_B0TGY7 Sigma 54 modulation protein/ribosomal protein s30ae n=1
Tax=Heliobacterium modesticaldum Ice1 RepID=B0TGY7_HELMI
Length = 174
Score = 65.9 bits (159), Expect = 2e-09
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = -3
Query: 518 EEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYG 339
E+ AT VVR+K F + P+ V EAI Q+ + H+F+ F N ET ++N+VY RK+G YG
Sbjct: 108 EKNGATEPRVVRSKRFALKPMPVDEAIMQMNLIGHSFFVFSNAETEQVNVVYLRKDGNYG 167
Query: 338 LIIPK 324
LI P+
Sbjct: 168 LIEPE 172
[93][TOP]
>UniRef100_A8MJN7 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Alkaliphilus oremlandii OhILAs RepID=A8MJN7_ALKOO
Length = 181
Score = 65.9 bits (159), Expect = 2e-09
Identities = 30/64 (46%), Positives = 42/64 (65%)
Frame = -3
Query: 518 EEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYG 339
E G A+ ++VRTK F + P+ EA+ Q+ + H FY F + ET E+ +VYKRK+G YG
Sbjct: 113 ENGNASESKIVRTKRFSIKPMNAEEAVLQMELLGHNFYVFLDGETDEVGVVYKRKDGNYG 172
Query: 338 LIIP 327
LI P
Sbjct: 173 LIEP 176
[94][TOP]
>UniRef100_Q1PJW9 Light repressed protein A n=1 Tax=uncultured Prochlorococcus
marinus clone HF10-88F10 RepID=Q1PJW9_PROMA
Length = 194
Score = 65.9 bits (159), Expect = 2e-09
Identities = 32/72 (44%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = -3
Query: 536 DISPLEEEGEATLVEV-VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYK 360
D + L++ EA+L E ++ KYF+M P++ EA +QL +DH FY FRN++ ++ ++YK
Sbjct: 123 DEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRNKKNNQLQVIYK 182
Query: 359 RKEGGYGLIIPK 324
R GGYGLI K
Sbjct: 183 RNHGGYGLIQSK 194
[95][TOP]
>UniRef100_C4GCR0 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles
DSM 14600 RepID=C4GCR0_9FIRM
Length = 176
Score = 65.9 bits (159), Expect = 2e-09
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = -3
Query: 518 EEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYG 339
+E E +++VRTK FD+ P+ +A Q+ + H+F+ F N ET +N+VY+RK G YG
Sbjct: 111 DEDEEEEIKIVRTKKFDLKPMYAEDACAQMELLGHSFFVFTNAETDAVNVVYRRKNGSYG 170
Query: 338 LIIPK 324
LI P+
Sbjct: 171 LIEPE 175
[96][TOP]
>UniRef100_C2KX79 Ribosome-associated inhibitor A n=1 Tax=Oribacterium sinus F0268
RepID=C2KX79_9FIRM
Length = 176
Score = 65.9 bits (159), Expect = 2e-09
Identities = 29/68 (42%), Positives = 47/68 (69%)
Frame = -3
Query: 527 PLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEG 348
P ++E E +++VRTK+ D+ P+T EA Q+ + H+F+ F++ TG++N+VYKRK
Sbjct: 111 PAQDEEE---IKIVRTKHIDLKPMTAEEACLQMELLGHSFFVFQDGNTGKVNVVYKRKAN 167
Query: 347 GYGLIIPK 324
YGLI P+
Sbjct: 168 SYGLIEPE 175
[97][TOP]
>UniRef100_C1FQQ9 Ribosomal subunit interface protein n=2 Tax=Clostridium botulinum
RepID=C1FQQ9_CLOBJ
Length = 175
Score = 65.9 bits (159), Expect = 2e-09
Identities = 28/68 (41%), Positives = 46/68 (67%)
Frame = -3
Query: 527 PLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEG 348
P E GE ++V+TK F M P++ EA+ Q+ + H F+ ++N +T E+N++Y+RK+G
Sbjct: 107 PDYESGENKETQIVKTKKFAMKPMSSEEAVLQMELLGHNFFVYQNADTEEVNVIYRRKDG 166
Query: 347 GYGLIIPK 324
YGLI P+
Sbjct: 167 NYGLIEPE 174
[98][TOP]
>UniRef100_A3ZA02 Light repressed protein A-like protein n=1 Tax=Synechococcus sp.
RS9917 RepID=A3ZA02_9SYNE
Length = 195
Score = 65.9 bits (159), Expect = 2e-09
Identities = 27/52 (51%), Positives = 38/52 (73%)
Frame = -3
Query: 488 VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLI 333
VR KYF MPP+++ EA QL +DH FY FR+ TG++ ++Y+R GGYG+I
Sbjct: 140 VRRKYFAMPPMSLEEARHQLDVIDHDFYLFRDASTGDLQVIYRRNHGGYGVI 191
[99][TOP]
>UniRef100_C5D7S1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacillus sp. WCH70 RepID=C5D7S1_GEOSW
Length = 182
Score = 65.5 bits (158), Expect = 3e-09
Identities = 32/66 (48%), Positives = 42/66 (63%)
Frame = -3
Query: 530 SPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKE 351
+P EE E E+VRTK+F + P+ EAI Q+ + H F+ F N ET NIVY+RK+
Sbjct: 114 NPPVEENEEEEFEIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTNIVYRRKD 173
Query: 350 GGYGLI 333
G YGLI
Sbjct: 174 GKYGLI 179
[100][TOP]
>UniRef100_A5CYJ2 Ribosome-associated protein Y n=1 Tax=Pelotomaculum
thermopropionicum SI RepID=A5CYJ2_PELTS
Length = 175
Score = 65.5 bits (158), Expect = 3e-09
Identities = 32/68 (47%), Positives = 46/68 (67%)
Frame = -3
Query: 527 PLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEG 348
P EE+G +VRTK F + P+ V EAI Q+ + H+F+ F N ET ++N+VY+RK+G
Sbjct: 111 PEEEDGP----RLVRTKRFAIKPMPVEEAILQMNLLGHSFFVFSNAETEQVNVVYRRKDG 166
Query: 347 GYGLIIPK 324
YGLI P+
Sbjct: 167 NYGLIEPE 174
[101][TOP]
>UniRef100_Q1PKX8 Light repressed protein A-like protein n=1 Tax=uncultured
Prochlorococcus marinus clone ASNC2259
RepID=Q1PKX8_PROMA
Length = 194
Score = 65.5 bits (158), Expect = 3e-09
Identities = 27/55 (49%), Positives = 39/55 (70%)
Frame = -3
Query: 488 VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
++ KYF+M P++ EA +QL +DH FY FRN++ E+ ++YKR GGYGLI K
Sbjct: 140 IKNKYFEMTPISSDEARKQLDLIDHDFYVFRNKKNNELQVIYKRNHGGYGLIQSK 194
[102][TOP]
>UniRef100_Q063T8 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Synechococcus sp. BL107 RepID=Q063T8_9SYNE
Length = 195
Score = 65.5 bits (158), Expect = 3e-09
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Frame = -3
Query: 548 EEDDDISPLE----EEGEATLVEV-VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEET 384
EE D S +E + EA L E VR KYF MPP+T+ +A QL +DH FY F++ T
Sbjct: 115 EEVSDESVVEGSLVDGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFYLFKDSAT 174
Query: 383 GEINIVYKRKEGGYGLI 333
G + ++Y+R GGYG+I
Sbjct: 175 GALQVIYRRNHGGYGVI 191
[103][TOP]
>UniRef100_B7HX18 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group
RepID=B7HX18_BACC7
Length = 180
Score = 65.5 bits (158), Expect = 3e-09
Identities = 32/65 (49%), Positives = 43/65 (66%)
Frame = -3
Query: 518 EEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYG 339
+E E +E+VRTK FD+ P+ V EAI Q+ + H F+ F N +T E N+VY RK+G YG
Sbjct: 116 DEVEEDQLELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVVYGRKDGKYG 175
Query: 338 LIIPK 324
LI K
Sbjct: 176 LIETK 180
[104][TOP]
>UniRef100_A6NQP5 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus
ATCC 29799 RepID=A6NQP5_9BACE
Length = 181
Score = 65.5 bits (158), Expect = 3e-09
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = -3
Query: 545 EDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEET-GEINI 369
++++IS + E +VRTK F + P++V EAI Q+ VDH F+AFR+ + G +
Sbjct: 106 DEEEISSFVPDTEEEEFRIVRTKKFPIRPMSVEEAILQMNLVDHTFFAFRDADADGSFAV 165
Query: 368 VYKRKEGGYGLII 330
VYKR +GGYGLI+
Sbjct: 166 VYKRNDGGYGLIV 178
[105][TOP]
>UniRef100_UPI00017F60C6 putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
QCD-23m63 RepID=UPI00017F60C6
Length = 185
Score = 65.1 bits (157), Expect = 3e-09
Identities = 34/63 (53%), Positives = 44/63 (69%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
+EE E ++E R K F++ P++ EAI Q+ V H FY FRN++ EINIVYKRK GGY
Sbjct: 122 DEEYENIVIE--RRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEINIVYKRKAGGY 179
Query: 341 GLI 333
GLI
Sbjct: 180 GLI 182
[106][TOP]
>UniRef100_B7IPV2 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group
RepID=B7IPV2_BACC2
Length = 180
Score = 65.1 bits (157), Expect = 3e-09
Identities = 32/65 (49%), Positives = 43/65 (66%)
Frame = -3
Query: 518 EEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYG 339
+E E +E+VRTK FD+ P+ V EAI Q+ + H F+ F N +T E N+VY RK+G YG
Sbjct: 116 DEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVVYGRKDGKYG 175
Query: 338 LIIPK 324
LI K
Sbjct: 176 LIETK 180
[107][TOP]
>UniRef100_C2WEE0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus Rock3-44
RepID=C2WEE0_BACCE
Length = 180
Score = 65.1 bits (157), Expect = 3e-09
Identities = 35/72 (48%), Positives = 46/72 (63%)
Frame = -3
Query: 539 DDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYK 360
+ + LEE E L E+VRTK FD+ P+ V EAI Q+ + H F+ F N +T E N+VY
Sbjct: 110 ESAATLEEVKEDDL-ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVVYG 168
Query: 359 RKEGGYGLIIPK 324
RK+G YGLI K
Sbjct: 169 RKDGKYGLIETK 180
[108][TOP]
>UniRef100_C2U573 Ribosome-associated factor Y n=3 Tax=Bacillus cereus
RepID=C2U573_BACCE
Length = 180
Score = 65.1 bits (157), Expect = 3e-09
Identities = 32/65 (49%), Positives = 43/65 (66%)
Frame = -3
Query: 518 EEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYG 339
+E E +E+VRTK FD+ P+ V EAI Q+ + H F+ F N +T E N+VY RK+G YG
Sbjct: 116 DEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVVYGRKDGKYG 175
Query: 338 LIIPK 324
LI K
Sbjct: 176 LIETK 180
[109][TOP]
>UniRef100_B7HEI9 Ribosomal subunit interface protein n=9 Tax=Bacillus cereus group
RepID=B7HEI9_BACC4
Length = 180
Score = 65.1 bits (157), Expect = 3e-09
Identities = 32/65 (49%), Positives = 43/65 (66%)
Frame = -3
Query: 518 EEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYG 339
+E E +E+VRTK FD+ P+ V EAI Q+ + H F+ F N +T E N+VY RK+G YG
Sbjct: 116 DEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVVYGRKDGKYG 175
Query: 338 LIIPK 324
LI K
Sbjct: 176 LIETK 180
[110][TOP]
>UniRef100_C2QJQ3 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Bacillus cereus R309803 RepID=C2QJQ3_BACCE
Length = 180
Score = 65.1 bits (157), Expect = 3e-09
Identities = 32/65 (49%), Positives = 43/65 (66%)
Frame = -3
Query: 518 EEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYG 339
+E E +E+VRTK FD+ P+ V EAI Q+ + H F+ F N +T E N+VY RK+G YG
Sbjct: 116 DEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVVYGRKDGKYG 175
Query: 338 LIIPK 324
LI K
Sbjct: 176 LIETK 180
[111][TOP]
>UniRef100_Q72XS8 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group
RepID=Q72XS8_BACC1
Length = 180
Score = 65.1 bits (157), Expect = 3e-09
Identities = 32/65 (49%), Positives = 43/65 (66%)
Frame = -3
Query: 518 EEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYG 339
+E E +E+VRTK FD+ P+ V EAI Q+ + H F+ F N +T E N+VY RK+G YG
Sbjct: 116 DEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVVYGRKDGKYG 175
Query: 338 LIIPK 324
LI K
Sbjct: 176 LIETK 180
[112][TOP]
>UniRef100_B5UPY3 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group
RepID=B5UPY3_BACCE
Length = 180
Score = 65.1 bits (157), Expect = 3e-09
Identities = 32/65 (49%), Positives = 43/65 (66%)
Frame = -3
Query: 518 EEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYG 339
+E E +E+VRTK FD+ P+ V EAI Q+ + H F+ F N +T E N+VY RK+G YG
Sbjct: 116 DEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVVYGRKDGKYG 175
Query: 338 LIIPK 324
LI K
Sbjct: 176 LIETK 180
[113][TOP]
>UniRef100_B0A7Y1 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM
16795 RepID=B0A7Y1_9CLOT
Length = 187
Score = 65.1 bits (157), Expect = 3e-09
Identities = 33/69 (47%), Positives = 48/69 (69%)
Frame = -3
Query: 539 DDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYK 360
+D + +++GE +V + R K FDM P++ EA+ Q+ V H FY FRN +T EI+IVY+
Sbjct: 117 EDNAAEDKDGEFDIV-IERHKKFDMKPMSPEEAVLQMELVGHDFYMFRNIDTDEISIVYR 175
Query: 359 RKEGGYGLI 333
R+ GGYGLI
Sbjct: 176 RETGGYGLI 184
[114][TOP]
>UniRef100_Q7U8F3 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 8102
RepID=Q7U8F3_SYNPX
Length = 195
Score = 64.7 bits (156), Expect = 4e-09
Identities = 26/56 (46%), Positives = 41/56 (73%)
Frame = -3
Query: 488 VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPKG 321
VR KYF MPP+++ EA QL +DH FY FR++++ ++ ++Y+R GGYG+I +G
Sbjct: 140 VRRKYFAMPPMSLEEARRQLDLIDHDFYLFRDKDSDQLQVIYRRNHGGYGVIQARG 195
[115][TOP]
>UniRef100_B7GL70 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Anoxybacillus
flavithermus WK1 RepID=B7GL70_ANOFW
Length = 182
Score = 64.7 bits (156), Expect = 4e-09
Identities = 33/62 (53%), Positives = 39/62 (62%)
Frame = -3
Query: 518 EEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYG 339
EE E EVVRTK F + P+ EAI Q+ + H FY F N ET N+VYKRK+G YG
Sbjct: 118 EEHEEEEFEVVRTKRFSLKPMDSEEAILQMNMLGHNFYVFINAETNRTNVVYKRKDGKYG 177
Query: 338 LI 333
LI
Sbjct: 178 LI 179
[116][TOP]
>UniRef100_A9KS11 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Clostridium phytofermentans ISDg RepID=A9KS11_CLOPH
Length = 178
Score = 64.7 bits (156), Expect = 4e-09
Identities = 30/67 (44%), Positives = 40/67 (59%)
Frame = -3
Query: 524 LEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGG 345
L E+ + + + R K F M P+ EA Q+ + H FY FRN ET E+N+VYKRK
Sbjct: 111 LNEDSDEEDINITRVKRFAMKPMDAEEACVQMELLGHNFYVFRNAETDEVNVVYKRKGNS 170
Query: 344 YGLIIPK 324
YGLI P+
Sbjct: 171 YGLIEPE 177
[117][TOP]
>UniRef100_A4XJ41 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Caldicellulosiruptor saccharolyticus DSM 8903
RepID=A4XJ41_CALS8
Length = 182
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/75 (41%), Positives = 49/75 (65%)
Frame = -3
Query: 548 EEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINI 369
EE + EE GE ++ +TK F + P++V EAI Q+ + H+F+ F N++T ++N+
Sbjct: 110 EEAQQETNQEENGE---FKIAKTKRFPIKPMSVDEAILQMNLLGHSFFVFLNQDTDKVNV 166
Query: 368 VYKRKEGGYGLIIPK 324
VYKR +G YGLI P+
Sbjct: 167 VYKRNDGAYGLIEPE 181
[118][TOP]
>UniRef100_C3AT15 Ribosome-associated factor Y n=3 Tax=Bacillus RepID=C3AT15_BACMY
Length = 180
Score = 64.7 bits (156), Expect = 4e-09
Identities = 32/65 (49%), Positives = 43/65 (66%)
Frame = -3
Query: 518 EEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYG 339
EE + +E+VRTK FD+ P+ V EAI Q+ + H F+ F N +T E N+VY RK+G YG
Sbjct: 116 EEVKEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVVYGRKDGKYG 175
Query: 338 LIIPK 324
LI K
Sbjct: 176 LIETK 180
[119][TOP]
>UniRef100_A9VQA3 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Bacillus cereus group RepID=A9VQA3_BACWK
Length = 180
Score = 64.7 bits (156), Expect = 4e-09
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = -3
Query: 497 VEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
+E+VRTK FD+ P+ V EAI Q+ + H+F+ F N +T E N+VY RK+G YGLI K
Sbjct: 123 LELVRTKRFDLKPMDVEEAILQMDMLGHSFFVFTNADTNETNVVYGRKDGKYGLIETK 180
[120][TOP]
>UniRef100_C2SSP0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus BDRD-ST196
RepID=C2SSP0_BACCE
Length = 180
Score = 64.7 bits (156), Expect = 4e-09
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = -3
Query: 497 VEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
+E+VRTK FD+ P+ V EAI Q+ + H+F+ F N +T E N+VY RK+G YGLI K
Sbjct: 123 LELVRTKRFDLKPMDVEEAILQMDMLGHSFFVFTNADTNETNVVYGRKDGKYGLIETK 180
[121][TOP]
>UniRef100_C2Q3D0 Ribosome-associated factor Y n=2 Tax=Bacillus cereus
RepID=C2Q3D0_BACCE
Length = 180
Score = 64.7 bits (156), Expect = 4e-09
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = -3
Query: 497 VEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
+E+VRTK FD+ P+ V EAI Q+ + H+F+ F N +T E N+VY RK+G YGLI K
Sbjct: 123 LELVRTKRFDLKPMDVEEAILQMDMLGHSFFVFTNADTNETNVVYGRKDGKYGLIETK 180
[122][TOP]
>UniRef100_B6G1P8 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
13275 RepID=B6G1P8_9CLOT
Length = 190
Score = 64.7 bits (156), Expect = 4e-09
Identities = 32/64 (50%), Positives = 44/64 (68%)
Frame = -3
Query: 524 LEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGG 345
L+ E E V + R K F++ P+++ EAI Q+ DH FY F++ E+ EI +VYKRKEGG
Sbjct: 123 LDYEVEEPEVVIERRKKFNLKPMSIEEAILQMNLTDHDFYMFKDRESFEICLVYKRKEGG 182
Query: 344 YGLI 333
YGLI
Sbjct: 183 YGLI 186
[123][TOP]
>UniRef100_Q3AI28 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Synechococcus sp. CC9605 RepID=Q3AI28_SYNSC
Length = 195
Score = 64.3 bits (155), Expect = 6e-09
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 5/74 (6%)
Frame = -3
Query: 539 DDISPLE----EEGEATLVEV-VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEI 375
+D SP+E + EA L + VR KYF MPP+ + EA QL +DH FY FR +E+ ++
Sbjct: 118 NDASPVEASLLQGREAELPDPGVRRKYFAMPPMGLEEARRQLDLIDHDFYLFREKESDQL 177
Query: 374 NIVYKRKEGGYGLI 333
++Y+R GGYG+I
Sbjct: 178 QVIYRRNHGGYGVI 191
[124][TOP]
>UniRef100_B9EAE7 Ribosomal subunit interface protein homolog n=1 Tax=Macrococcus
caseolyticus JCSC5402 RepID=B9EAE7_MACCJ
Length = 186
Score = 64.3 bits (155), Expect = 6e-09
Identities = 30/65 (46%), Positives = 44/65 (67%)
Frame = -3
Query: 527 PLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEG 348
P EE+G+ +E++R+K F + P+ EA+ Q+ + H F+ F + ET E NIVYKRK+G
Sbjct: 118 PEEEKGDE--IEIIRSKQFALKPMDAEEAVLQMNMLGHDFFIFNDRETNETNIVYKRKDG 175
Query: 347 GYGLI 333
YGLI
Sbjct: 176 KYGLI 180
[125][TOP]
>UniRef100_A4J928 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Desulfotomaculum reducens MI-1 RepID=A4J928_DESRM
Length = 173
Score = 64.3 bits (155), Expect = 6e-09
Identities = 29/71 (40%), Positives = 46/71 (64%)
Frame = -3
Query: 536 DISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKR 357
D+ + E+ E +V++TK F + P+ + EAI Q+ + H F+ F N ET + N++YKR
Sbjct: 102 DLGVVVEDMEDETPQVIKTKRFAIKPMALDEAIMQMNLLGHDFFVFSNAETEQTNVIYKR 161
Query: 356 KEGGYGLIIPK 324
K+G YGLI P+
Sbjct: 162 KDGNYGLIEPE 172
[126][TOP]
>UniRef100_C8W7H2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Atopobium parvulum DSM 20469 RepID=C8W7H2_ATOPD
Length = 196
Score = 64.3 bits (155), Expect = 6e-09
Identities = 32/76 (42%), Positives = 45/76 (59%)
Frame = -3
Query: 551 LEEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEIN 372
L ++D + +E E ++VR KY D+ P+T EA+ Q + H FY F N TG N
Sbjct: 114 LTQEDLANLIEIPAEDLDDQLVREKYVDLEPMTEEEALVQTDLLGHDFYVFVNSSTGLTN 173
Query: 371 IVYKRKEGGYGLIIPK 324
++Y RK GGYG+I PK
Sbjct: 174 VIYHRKNGGYGIIKPK 189
[127][TOP]
>UniRef100_C7IPR2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Thermoanaerobacter ethanolicus CCSD1
RepID=C7IPR2_THEET
Length = 181
Score = 64.3 bits (155), Expect = 6e-09
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
EEEG E+V+TK F + P++ EAI Q+ + H+F+ F N +T IN+VYKRK+G Y
Sbjct: 118 EEEGS---FEIVKTKRFPIKPMSPEEAILQMNLLGHSFFVFTNADTDTINVVYKRKDGKY 174
Query: 341 GLIIP 327
GLI P
Sbjct: 175 GLIEP 179
[128][TOP]
>UniRef100_C2C307 Ribosome-associated inhibitor protein Y n=1 Tax=Listeria grayi DSM
20601 RepID=C2C307_LISGR
Length = 189
Score = 64.3 bits (155), Expect = 6e-09
Identities = 32/71 (45%), Positives = 44/71 (61%)
Frame = -3
Query: 545 EDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIV 366
E +D +P EE +E+VRTK F + P+ EA+ Q+ + H F+ F + ET NIV
Sbjct: 114 EINDSTPSEETDSDYDIEIVRTKSFSLKPMDSEEAVLQMNLLGHNFFVFNDAETNGTNIV 173
Query: 365 YKRKEGGYGLI 333
YKRK+G YGLI
Sbjct: 174 YKRKDGKYGLI 184
[129][TOP]
>UniRef100_C0BAM2 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC
27758 RepID=C0BAM2_9FIRM
Length = 189
Score = 64.3 bits (155), Expect = 6e-09
Identities = 30/62 (48%), Positives = 41/62 (66%)
Frame = -3
Query: 509 EATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLII 330
E+ +E+VRTK F + P+ +A Q+ + H FY F N ET E+N+VYKRK G YGLI
Sbjct: 126 ESDEIEIVRTKRFGIKPMFPEDACIQMELLGHNFYVFSNAETDEVNVVYKRKNGTYGLIE 185
Query: 329 PK 324
P+
Sbjct: 186 PE 187
[130][TOP]
>UniRef100_A5KKP2 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC
27756 RepID=A5KKP2_9FIRM
Length = 198
Score = 64.3 bits (155), Expect = 6e-09
Identities = 31/76 (40%), Positives = 48/76 (63%)
Frame = -3
Query: 551 LEEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEIN 372
+E DD+ S +E + +VRTK F + P+ +A Q+ + H+F+ F N ET E+N
Sbjct: 127 IESDDESSDDDE------IRIVRTKKFGIKPMFPEDACIQMELLGHSFFVFSNAETDEVN 180
Query: 371 IVYKRKEGGYGLIIPK 324
+VYKRK+G +GLI P+
Sbjct: 181 VVYKRKDGSFGLIEPE 196
[131][TOP]
>UniRef100_UPI0001789185 sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789185
Length = 188
Score = 63.9 bits (154), Expect = 7e-09
Identities = 31/54 (57%), Positives = 38/54 (70%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLI 333
EVVRTK F M P+ V EAI Q+ V H F+ F N +T E+N+VYKR +G YGLI
Sbjct: 132 EVVRTKRFTMKPMDVEEAILQMNMVGHNFFVFSNIDTQEVNVVYKRDDGKYGLI 185
[132][TOP]
>UniRef100_UPI0001694CB6 ribosomal subunit interface protein n=1 Tax=Paenibacillus larvae
subsp. larvae BRL-230010 RepID=UPI0001694CB6
Length = 182
Score = 63.9 bits (154), Expect = 7e-09
Identities = 33/73 (45%), Positives = 46/73 (63%)
Frame = -3
Query: 545 EDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIV 366
E ++ EE E E+VRTK F + P+ V EAI Q+ V H F+ F N +T ++N+V
Sbjct: 111 EPSSVANTVEEEE---YELVRTKRFTLKPMDVEEAILQMNMVGHNFFVFANMDTDQVNVV 167
Query: 365 YKRKEGGYGLIIP 327
YKR++G YGLI P
Sbjct: 168 YKREDGRYGLIEP 180
[133][TOP]
>UniRef100_Q898W3 SSU ribosomal protein S30P n=1 Tax=Clostridium tetani
RepID=Q898W3_CLOTE
Length = 176
Score = 63.9 bits (154), Expect = 7e-09
Identities = 26/57 (45%), Positives = 42/57 (73%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
++V+TK F + P++ EA+ Q+ + H F+ F + +TGE+N+VYKRK+G YGLI P+
Sbjct: 119 KIVKTKRFAIKPMSSEEAVLQMELIGHNFFVFESADTGEVNVVYKRKDGNYGLIEPE 175
[134][TOP]
>UniRef100_UPI0001B41AC9 ribosomal subunit interface protein n=1 Tax=Bacillus anthracis str.
A1055 RepID=UPI0001B41AC9
Length = 111
Score = 63.5 bits (153), Expect = 1e-08
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = -3
Query: 497 VEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
+E+VRTK FD+ P+ V EAI Q+ + H F+ F N +T E N+VY RK+G YGLI K
Sbjct: 54 LELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVVYGRKDGKYGLIETK 111
[135][TOP]
>UniRef100_Q2RLX7 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RLX7_MOOTA
Length = 190
Score = 63.5 bits (153), Expect = 1e-08
Identities = 30/68 (44%), Positives = 45/68 (66%)
Frame = -3
Query: 527 PLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEG 348
P EE G ++RTK F + P+ V EAI Q+ + H+F+ F N ET E+N++Y+R++G
Sbjct: 124 PEEENGPEP--RLIRTKRFPIKPMPVEEAILQMNLLGHSFFVFSNAETEEVNVLYRRRDG 181
Query: 347 GYGLIIPK 324
YGLI P+
Sbjct: 182 NYGLIEPE 189
[136][TOP]
>UniRef100_A5UVY5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Roseiflexus sp. RS-1 RepID=A5UVY5_ROSS1
Length = 193
Score = 63.5 bits (153), Expect = 1e-08
Identities = 27/70 (38%), Positives = 49/70 (70%)
Frame = -3
Query: 533 ISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRK 354
++ +EE E +VRTK F + P+ EA+EQ+ + H F+ F++ +TG++N++Y+R+
Sbjct: 123 LADTQEEEERP--RIVRTKEFQVKPMYSDEAVEQMELLGHNFFIFQDADTGKLNVLYRRQ 180
Query: 353 EGGYGLIIPK 324
+G YGLI+P+
Sbjct: 181 DGNYGLIVPE 190
[137][TOP]
>UniRef100_C7ICT8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Clostridium papyrosolvens DSM 2782
RepID=C7ICT8_9CLOT
Length = 176
Score = 63.5 bits (153), Expect = 1e-08
Identities = 30/72 (41%), Positives = 48/72 (66%)
Frame = -3
Query: 539 DDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYK 360
D+ +++ E T +VVR+K F + P+ V EAI Q+ + H F+ F N ++ ++N+VYK
Sbjct: 104 DNTKFIDDVQEETEFKVVRSKRFAVKPMDVEEAILQMNLLGHEFFMFYNADSRQVNVVYK 163
Query: 359 RKEGGYGLIIPK 324
RK+G YGLI P+
Sbjct: 164 RKDGNYGLIEPE 175
[138][TOP]
>UniRef100_C6Q126 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Clostridium carboxidivorans P7 RepID=C6Q126_9CLOT
Length = 175
Score = 63.5 bits (153), Expect = 1e-08
Identities = 28/71 (39%), Positives = 48/71 (67%)
Frame = -3
Query: 536 DISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKR 357
D+ P ++E ++V+TK F + P++ EA+ Q+ + H F+ +++ E GE+N+VYKR
Sbjct: 108 DLEPKDKEES----KIVKTKRFAIKPMSSEEAVLQMELLGHNFFVYKDAENGEVNVVYKR 163
Query: 356 KEGGYGLIIPK 324
K+G YGLI P+
Sbjct: 164 KDGNYGLIEPE 174
[139][TOP]
>UniRef100_C3GRH2 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1 RepID=C3GRH2_BACTU
Length = 180
Score = 63.5 bits (153), Expect = 1e-08
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = -3
Query: 497 VEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
+E+VRTK FD+ P+ V EAI Q+ + H F+ F N +T E N+VY RK+G YGLI K
Sbjct: 123 LELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVVYGRKDGKYGLIETK 180
[140][TOP]
>UniRef100_C2ZFA1 Ribosome-associated factor Y n=2 Tax=Bacillus cereus
RepID=C2ZFA1_BACCE
Length = 180
Score = 63.5 bits (153), Expect = 1e-08
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = -3
Query: 497 VEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
+E+VRTK FD+ P+ V EAI Q+ + H F+ F N +T E N+VY RK+G YGLI K
Sbjct: 123 LELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVVYGRKDGKYGLIETK 180
[141][TOP]
>UniRef100_C2YZ14 Ribosome-associated factor Y n=1 Tax=Bacillus cereus AH1271
RepID=C2YZ14_BACCE
Length = 180
Score = 63.5 bits (153), Expect = 1e-08
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = -3
Query: 497 VEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
+E+VRTK FD+ P+ V EAI Q+ + H F+ F N +T E N+VY RK+G YGLI K
Sbjct: 123 LELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVVYGRKDGKYGLIETK 180
[142][TOP]
>UniRef100_B0MPR7 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM
15702 RepID=B0MPR7_9FIRM
Length = 211
Score = 63.5 bits (153), Expect = 1e-08
Identities = 31/71 (43%), Positives = 50/71 (70%)
Frame = -3
Query: 539 DDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYK 360
DD+ +EE+ + EVV+ K F++ P++ EAI Q+ ++HAF+ FRN +TGEIN+VY+
Sbjct: 143 DDV--VEEQAD---FEVVKHKKFNLRPMSEDEAILQMNMLEHAFFMFRNAKTGEINVVYR 197
Query: 359 RKEGGYGLIIP 327
R +G Y ++ P
Sbjct: 198 RDDGNYAVLEP 208
[143][TOP]
>UniRef100_A0RKX8 Sigma 54 modulation protein / SSU ribosomal protein S30P n=26
Tax=Bacillus cereus group RepID=A0RKX8_BACAH
Length = 180
Score = 63.5 bits (153), Expect = 1e-08
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = -3
Query: 497 VEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
+E+VRTK FD+ P+ V EAI Q+ + H F+ F N +T E N+VY RK+G YGLI K
Sbjct: 123 LELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVVYGRKDGKYGLIETK 180
[144][TOP]
>UniRef100_A7B7M8 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC
29149 RepID=A7B7M8_RUMGN
Length = 185
Score = 63.5 bits (153), Expect = 1e-08
Identities = 32/75 (42%), Positives = 47/75 (62%)
Frame = -3
Query: 548 EEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINI 369
E +DD S +E + +VRTK F + P+ +A Q+ + HAF+ F N ET E+N+
Sbjct: 115 ESEDDTSVDDE------IRIVRTKRFGIKPMYPEDACIQMDLLGHAFFVFCNAETDEVNV 168
Query: 368 VYKRKEGGYGLIIPK 324
VYKRK+G +GLI P+
Sbjct: 169 VYKRKDGSFGLIEPE 183
[145][TOP]
>UniRef100_C6D4V5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Paenibacillus sp. JDR-2 RepID=C6D4V5_PAESJ
Length = 182
Score = 63.2 bits (152), Expect = 1e-08
Identities = 32/67 (47%), Positives = 45/67 (67%)
Frame = -3
Query: 533 ISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRK 354
+S ++EE E +E+VRTK F + P+ V EAI Q+ V H F+ F N + E+N+VYKR
Sbjct: 116 VSVMDEEDE---LELVRTKRFMLKPMDVEEAILQMNMVGHNFFVFSNIDNKEVNVVYKRS 172
Query: 353 EGGYGLI 333
+G YGLI
Sbjct: 173 DGKYGLI 179
[146][TOP]
>UniRef100_B8GDB0 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Chloroflexus aggregans DSM 9485 RepID=B8GDB0_CHLAD
Length = 197
Score = 63.2 bits (152), Expect = 1e-08
Identities = 28/69 (40%), Positives = 50/69 (72%)
Frame = -3
Query: 530 SPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKE 351
+P+E E A +V+RTK F + P+ V +AIEQ+ + H F+ F++ ET +I+++Y+R++
Sbjct: 130 APVETEPVA---KVIRTKTFRLRPMFVDDAIEQMELLGHTFFVFQDAETMQISVLYRRRD 186
Query: 350 GGYGLIIPK 324
G YG+I+P+
Sbjct: 187 GNYGVIVPE 195
[147][TOP]
>UniRef100_A5N3B3 Predicted ribosome-associated protein n=2 Tax=Clostridium kluyveri
RepID=A5N3B3_CLOK5
Length = 175
Score = 63.2 bits (152), Expect = 1e-08
Identities = 26/68 (38%), Positives = 48/68 (70%)
Frame = -3
Query: 527 PLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEG 348
P E+E + ++V+TK F + P++ EA+ Q+ + H+F+ +R+ E G++N++YKR++G
Sbjct: 107 PDEKETDNQEHKIVKTKRFAVKPMSSEEAVLQMELLGHSFFVYRDAEQGDVNVIYKRRDG 166
Query: 347 GYGLIIPK 324
YGLI P+
Sbjct: 167 NYGLIEPE 174
[148][TOP]
>UniRef100_D0CH01 Sigma 54 modulation protein n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CH01_9SYNE
Length = 195
Score = 63.2 bits (152), Expect = 1e-08
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Frame = -3
Query: 539 DDISPLEEE----GEATLVEV-VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEI 375
+D SP+E EA L + VR KYF MPP+ + +A QL +DH FY FR +E+ ++
Sbjct: 118 NDASPVESSLLQGREAELPDPGVRRKYFAMPPMGLEDARRQLDLIDHDFYLFREKESDQL 177
Query: 374 NIVYKRKEGGYGLI 333
++Y+R GGYG+I
Sbjct: 178 QVIYRRNHGGYGVI 191
[149][TOP]
>UniRef100_C8NDQ1 Ribosomal subunit interface protein n=1 Tax=Granulicatella adiacens
ATCC 49175 RepID=C8NDQ1_9LACT
Length = 186
Score = 63.2 bits (152), Expect = 1e-08
Identities = 30/65 (46%), Positives = 43/65 (66%)
Frame = -3
Query: 527 PLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEG 348
P E E T +E+VRTK D+ P+ EA+ Q+ + H F+ +++ ET E NIVY+RK+G
Sbjct: 119 PEAPEEEETGLEIVRTKRIDLKPMDSEEAVLQMNMLGHNFFIYQDAETNETNIVYRRKDG 178
Query: 347 GYGLI 333
YGLI
Sbjct: 179 KYGLI 183
[150][TOP]
>UniRef100_C6QNN3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacillus sp. Y4.1MC1 RepID=C6QNN3_9BACI
Length = 183
Score = 63.2 bits (152), Expect = 1e-08
Identities = 30/62 (48%), Positives = 40/62 (64%)
Frame = -3
Query: 518 EEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYG 339
E+ E E+VRTK+F + P+ EAI Q+ + H F+ F N ET NIVY+RK+G YG
Sbjct: 119 EDNEEEEFEIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTNIVYRRKDGKYG 178
Query: 338 LI 333
LI
Sbjct: 179 LI 180
[151][TOP]
>UniRef100_C6PBD3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571
RepID=C6PBD3_CLOTS
Length = 179
Score = 63.2 bits (152), Expect = 1e-08
Identities = 30/61 (49%), Positives = 41/61 (67%)
Frame = -3
Query: 509 EATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLII 330
E T EVV+TK F + P++V EAI Q+ + H F+ F N +T + +VYKRK+G YGLI
Sbjct: 117 EETEFEVVKTKRFPVKPMSVQEAILQMNLLGHNFFVFTNSDTDDFTVVYKRKDGRYGLIE 176
Query: 329 P 327
P
Sbjct: 177 P 177
[152][TOP]
>UniRef100_B0KBV4 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Thermoanaerobacter RepID=B0KBV4_THEP3
Length = 181
Score = 63.2 bits (152), Expect = 1e-08
Identities = 32/65 (49%), Positives = 43/65 (66%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
EEEG E+V+TK F + P++ EAI Q+ + H F+ F N +T IN+VYKRK+G Y
Sbjct: 118 EEEGS---FEIVKTKRFPIKPMSPEEAILQMNLLGHNFFVFTNADTDTINVVYKRKDGKY 174
Query: 341 GLIIP 327
GLI P
Sbjct: 175 GLIEP 179
[153][TOP]
>UniRef100_B0K3A9 Sigma 54 modulation protein/ribosomal protein S30EA n=3
Tax=Thermoanaerobacter RepID=B0K3A9_THEPX
Length = 181
Score = 63.2 bits (152), Expect = 1e-08
Identities = 32/65 (49%), Positives = 43/65 (66%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
EEEG E+V+TK F + P++ EAI Q+ + H F+ F N +T IN+VYKRK+G Y
Sbjct: 118 EEEGS---FEIVKTKRFPIKPMSPEEAILQMNLLGHNFFVFTNADTDTINVVYKRKDGKY 174
Query: 341 GLIIP 327
GLI P
Sbjct: 175 GLIEP 179
[154][TOP]
>UniRef100_C2HJY8 Ribosome-associated inhibitor A n=1 Tax=Finegoldia magna ATCC 53516
RepID=C2HJY8_PEPMA
Length = 179
Score = 63.2 bits (152), Expect = 1e-08
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = -3
Query: 509 EATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLII 330
E + +V+TK F + P+ EAI Q+ +DH F+ F + +T +N+VYKRK+G YGL++
Sbjct: 115 EIPIGAIVKTKEFGIKPMDKEEAIMQMELIDHDFFVFLDSKTNNVNVVYKRKDGNYGLLV 174
Query: 329 P 327
P
Sbjct: 175 P 175
[155][TOP]
>UniRef100_C2D8Z3 Possible ribosome-associated inhibitor A n=1 Tax=Atopobium vaginae
DSM 15829 RepID=C2D8Z3_9ACTN
Length = 192
Score = 63.2 bits (152), Expect = 1e-08
Identities = 29/56 (51%), Positives = 36/56 (64%)
Frame = -3
Query: 491 VVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
+VR KY D+ P+T EA+ Q + H FY F N TG IN+VY R GGYG+I PK
Sbjct: 130 LVREKYIDLHPMTEEEALVQTDLIGHDFYVFENATTGLINVVYHRHNGGYGIIKPK 185
[156][TOP]
>UniRef100_B7AN97 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus
ATCC 43243 RepID=B7AN97_9BACE
Length = 179
Score = 63.2 bits (152), Expect = 1e-08
Identities = 29/58 (50%), Positives = 40/58 (68%)
Frame = -3
Query: 497 VEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
V+++RTK FD+ P+ EA Q+ + H+FY F N ET +IN+VYKRK YGLI P+
Sbjct: 121 VKIIRTKRFDVKPMDPEEACVQMELLGHSFYVFFNSETEQINVVYKRKGNTYGLIEPE 178
[157][TOP]
>UniRef100_B5CNW3 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC
29176 RepID=B5CNW3_9FIRM
Length = 186
Score = 63.2 bits (152), Expect = 1e-08
Identities = 30/75 (40%), Positives = 48/75 (64%)
Frame = -3
Query: 548 EEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINI 369
E +DD + +E +++VRTK F + P+ +A Q+ + H+F+ F N ET E+N+
Sbjct: 116 ETEDDAAEDDE------IQIVRTKKFGIKPMFPEDACIQMELLGHSFFVFSNAETDEVNV 169
Query: 368 VYKRKEGGYGLIIPK 324
VYKRK+G +GLI P+
Sbjct: 170 VYKRKDGSFGLIEPE 184
[158][TOP]
>UniRef100_C1EFG3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EFG3_9CHLO
Length = 284
Score = 63.2 bits (152), Expect = 1e-08
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETG-EINIVYKRKEGGYGLIIP 327
EVVR K+ + TV EA E++ N+ H F+AFRN G E+N+VYKR GGYG+I+P
Sbjct: 221 EVVREKFHPVRKCTVYEAAEEMENLGHTFFAFRNVAQGNEVNVVYKRDAGGYGVIVP 277
[159][TOP]
>UniRef100_Q0ICJ8 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
CC9311 RepID=Q0ICJ8_SYNS3
Length = 191
Score = 62.8 bits (151), Expect = 2e-08
Identities = 26/52 (50%), Positives = 38/52 (73%)
Frame = -3
Query: 488 VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLI 333
VR KYF MP +++ EA QL +DH FY FR++E+GE+ ++Y R GG+G+I
Sbjct: 136 VRRKYFAMPAMSLEEARHQLELIDHDFYLFRDKESGELQVIYHRNHGGFGVI 187
[160][TOP]
>UniRef100_A2C0K6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. NATL1A RepID=A2C0K6_PROM1
Length = 194
Score = 62.8 bits (151), Expect = 2e-08
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = -3
Query: 488 VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
VR KYF+M P+T+ +A QL +DH FY FR EE + ++Y+R GGYG+I K
Sbjct: 139 VRRKYFEMDPMTIEQARVQLDLIDHDFYLFREEEGSALRVIYRRNHGGYGVIQEK 193
[161][TOP]
>UniRef100_C9LS67 Ribosomal subunit interface protein n=1 Tax=Selenomonas sputigena
ATCC 35185 RepID=C9LS67_9FIRM
Length = 181
Score = 62.8 bits (151), Expect = 2e-08
Identities = 33/65 (50%), Positives = 44/65 (67%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
EEEGE LV +TK F + P+ V EAI Q+ ++H F+ FRN E+ EIN+VY+R +G Y
Sbjct: 118 EEEGEFPLV---KTKRFVVKPMDVQEAIMQMNLLNHNFFVFRNAESEEINVVYRRTDGKY 174
Query: 341 GLIIP 327
LI P
Sbjct: 175 ALIEP 179
[162][TOP]
>UniRef100_C5EVT1 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium
1_7_47FAA RepID=C5EVT1_9FIRM
Length = 187
Score = 62.8 bits (151), Expect = 2e-08
Identities = 30/76 (39%), Positives = 47/76 (61%)
Frame = -3
Query: 551 LEEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEIN 372
+EE+D++ E +++V+TK F + P EA Q+ + H+FY F N +T ++N
Sbjct: 118 IEEEDEVQDDE-------IQIVKTKKFAIKPTIPEEACLQMEMLGHSFYVFLNADTDQVN 170
Query: 371 IVYKRKEGGYGLIIPK 324
+VYKRK G YGLI P+
Sbjct: 171 VVYKRKNGTYGLIEPE 186
[163][TOP]
>UniRef100_C4EX83 SSU ribosomal protein S30P n=1 Tax=Thermanaerovibrio
acidaminovorans DSM 6589 RepID=C4EX83_9BACT
Length = 180
Score = 62.8 bits (151), Expect = 2e-08
Identities = 28/66 (42%), Positives = 46/66 (69%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
EEE + V +V+ K F + +T EA Q+ + H+F+ FR+ +TG++N+VY+RKEGGY
Sbjct: 115 EEEKQEGGVNIVKVKRFPVRVMTPEEAALQMDLLGHSFFLFRDGDTGDLNVVYRRKEGGY 174
Query: 341 GLIIPK 324
G++ P+
Sbjct: 175 GVLKPE 180
[164][TOP]
>UniRef100_C1XLG1 Sigma 54 modulation protein; SSU ribosomal protein S30P n=1
Tax=Meiothermus ruber DSM 1279 RepID=C1XLG1_MEIRU
Length = 183
Score = 62.8 bits (151), Expect = 2e-08
Identities = 29/65 (44%), Positives = 43/65 (66%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
EEE E +VRTK F M P+T +A ++ + H F+ FRN +T +IN++Y+R++G Y
Sbjct: 120 EEEAEP---RIVRTKRFHMKPMTPEDAAFEMEALGHDFFVFRNADTEQINVIYRRRDGNY 176
Query: 341 GLIIP 327
GLI P
Sbjct: 177 GLIEP 181
[165][TOP]
>UniRef100_B6G8G1 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM
13279 RepID=B6G8G1_9ACTN
Length = 194
Score = 62.8 bits (151), Expect = 2e-08
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Frame = -3
Query: 554 PLEEDDDISPL---EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEET 384
P+E D++ L EEE + ++VR K ++ P+T +A+ Q + H FY F N T
Sbjct: 113 PVEPVADLADLLIPEEEDD----QLVRVKEIELTPMTEEQALVQTDLLGHDFYVFENSTT 168
Query: 383 GEINIVYKRKEGGYGLIIPK 324
G IN+VY RK GGYG+I PK
Sbjct: 169 GLINVVYHRKNGGYGIIKPK 188
[166][TOP]
>UniRef100_B6FVY1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
13275 RepID=B6FVY1_9CLOT
Length = 194
Score = 62.8 bits (151), Expect = 2e-08
Identities = 31/70 (44%), Positives = 45/70 (64%)
Frame = -3
Query: 542 DDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVY 363
++D+ E+E L + R K ++ P++ EA+ Q+ V H FY FRN+ET EI +VY
Sbjct: 124 EEDLEDFEDE----LFIIKRRKRINIKPMSEEEAVLQMELVGHDFYIFRNDETDEIALVY 179
Query: 362 KRKEGGYGLI 333
KRK GGYG+I
Sbjct: 180 KRKNGGYGII 189
[167][TOP]
>UniRef100_A7FQJ2 Ribosomal subunit interface protein n=7 Tax=Clostridium botulinum
RepID=A7FQJ2_CLOB1
Length = 175
Score = 62.8 bits (151), Expect = 2e-08
Identities = 27/68 (39%), Positives = 45/68 (66%)
Frame = -3
Query: 527 PLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEG 348
P E E ++V+TK F M P++ EA+ Q+ + H F+ ++N +T E+N++Y+RK+G
Sbjct: 107 PDYESEENKETQIVKTKKFAMKPMSSEEAVLQMELLGHNFFVYQNADTEEVNVIYRRKDG 166
Query: 347 GYGLIIPK 324
YGLI P+
Sbjct: 167 NYGLIEPE 174
[168][TOP]
>UniRef100_Q0B0B5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen
RepID=Q0B0B5_SYNWW
Length = 181
Score = 62.4 bits (150), Expect = 2e-08
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIP 327
+VVR+K F + P+ V EAI Q+ + H+F+ F N ++ E+N+VYKRK+G YGLI P
Sbjct: 123 KVVRSKRFALKPMDVEEAIMQMNLLGHSFFVFFNPQSEEVNVVYKRKDGNYGLIEP 178
[169][TOP]
>UniRef100_B8FYZ1 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Desulfitobacterium hafniense RepID=B8FYZ1_DESHD
Length = 175
Score = 62.4 bits (150), Expect = 2e-08
Identities = 30/57 (52%), Positives = 39/57 (68%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
EVVR K F P++V EAI Q+ V H FYAF N +T IN+VY+R+ G YGL+ P+
Sbjct: 118 EVVRHKKFGTKPMSVEEAIMQMNLVGHNFYAFTNMDTNVINVVYRRRSGDYGLLEPE 174
[170][TOP]
>UniRef100_B5YI17 SSU ribosomal protein S30P n=1 Tax=Thermodesulfovibrio yellowstonii
DSM 11347 RepID=B5YI17_THEYD
Length = 173
Score = 62.4 bits (150), Expect = 2e-08
Identities = 30/68 (44%), Positives = 46/68 (67%)
Frame = -3
Query: 530 SPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKE 351
S L EE E T +V+ K FD+ P++ EA++QL +D F+ F N +G++N++YKRK+
Sbjct: 105 SALSEEVE-TAKRIVKYKKFDLRPMSPEEAVDQLELLDKDFFIFINSFSGDVNVIYKRKD 163
Query: 350 GGYGLIIP 327
G +GLI P
Sbjct: 164 GNFGLIEP 171
[171][TOP]
>UniRef100_Q05SE1 Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9916
RepID=Q05SE1_9SYNE
Length = 195
Score = 62.4 bits (150), Expect = 2e-08
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = -3
Query: 488 VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLI 333
VR KYF MPP++V EA QL +DH F+ FR+ + E+ ++Y+R GGYG+I
Sbjct: 140 VRRKYFPMPPMSVEEARHQLDLIDHDFFLFRDASSKELQVIYRRNHGGYGVI 191
[172][TOP]
>UniRef100_C5VNV1 Ribosomal subunit interface protein n=1 Tax=Clostridium botulinum D
str. 1873 RepID=C5VNV1_CLOBO
Length = 178
Score = 62.4 bits (150), Expect = 2e-08
Identities = 26/57 (45%), Positives = 42/57 (73%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
++V+TK F + P++ EA+ Q+ + H F+ FRN +T E+N++YKRK+G YGLI P+
Sbjct: 121 KIVKTKKFAVKPMSNEEAVLQMELLGHNFFVFRNSDTDEVNVLYKRKDGQYGLIEPE 177
[173][TOP]
>UniRef100_B0P2P9 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1
RepID=B0P2P9_9CLOT
Length = 179
Score = 62.4 bits (150), Expect = 2e-08
Identities = 30/76 (39%), Positives = 47/76 (61%)
Frame = -3
Query: 551 LEEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEIN 372
+E++DD+ E + ++R+K F + P+ V EA Q+ + H F+ FRN +T E+N
Sbjct: 110 MEQEDDVEDDE-------IRIIRSKKFAIKPMDVEEACVQMELLGHDFFVFRNADTFEVN 162
Query: 371 IVYKRKEGGYGLIIPK 324
+VYKRK YGLI P+
Sbjct: 163 VVYKRKGNTYGLIEPE 178
[174][TOP]
>UniRef100_A8SVF0 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC
27759 RepID=A8SVF0_9FIRM
Length = 175
Score = 62.4 bits (150), Expect = 2e-08
Identities = 33/76 (43%), Positives = 45/76 (59%)
Frame = -3
Query: 551 LEEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEIN 372
+E+DDDI ++VRTK F + P+ +A Q+ + H FY FRN ET E+N
Sbjct: 111 IEDDDDI------------KIVRTKKFAVKPMYPEDACIQMDLLGHNFYVFRNAETDEVN 158
Query: 371 IVYKRKEGGYGLIIPK 324
+VYKRK YGLI P+
Sbjct: 159 VVYKRKGNTYGLIEPE 174
[175][TOP]
>UniRef100_Q67T85 30S ribosomal protein S30AE family n=1 Tax=Symbiobacterium
thermophilum RepID=Q67T85_SYMTH
Length = 178
Score = 62.0 bits (149), Expect = 3e-08
Identities = 25/57 (43%), Positives = 42/57 (73%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
+VV+ K F + P+TV EAI Q+ + H F+ F N +TG++N++Y+R +G YGL++P+
Sbjct: 121 KVVKVKRFPVKPVTVDEAILQMDLLSHDFFVFVNSDTGKVNVLYRRHDGDYGLLVPE 177
[176][TOP]
>UniRef100_Q46H11 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Prochlorococcus marinus str. NATL2A
RepID=Q46H11_PROMT
Length = 194
Score = 62.0 bits (149), Expect = 3e-08
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -3
Query: 488 VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
VR KYF+M P+ + +A QL +DH FY FR EE + ++YKR GGYG+I K
Sbjct: 139 VRRKYFEMTPMNIEQARVQLDLIDHDFYLFREEEGSALRVIYKRNHGGYGVIQEK 193
[177][TOP]
>UniRef100_Q1IYK5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Deinococcus geothermalis DSM 11300
RepID=Q1IYK5_DEIGD
Length = 186
Score = 62.0 bits (149), Expect = 3e-08
Identities = 26/56 (46%), Positives = 40/56 (71%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIP 327
E+VRTK FD+ P++ +A+ Q+ + H FY F+N +TG +VY+R++G YGLI P
Sbjct: 130 EIVRTKRFDLRPMSPEDAVTQMEALGHDFYVFKNMDTGGCAVVYRRRDGHYGLIEP 185
[178][TOP]
>UniRef100_B8I5T8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Clostridium cellulolyticum H10 RepID=B8I5T8_CLOCE
Length = 176
Score = 62.0 bits (149), Expect = 3e-08
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = -3
Query: 509 EATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLII 330
E T +VVR+K F + P+ V EAI Q+ + H F+ F N ++ ++N+VYKRK+G YGLI
Sbjct: 114 EETEFKVVRSKRFAVKPMDVEEAILQMNLLGHEFFMFYNADSRQVNVVYKRKDGNYGLIE 173
Query: 329 PK 324
P+
Sbjct: 174 PE 175
[179][TOP]
>UniRef100_C9RBI8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Ammonifex degensii KC4 RepID=C9RBI8_9THEO
Length = 177
Score = 62.0 bits (149), Expect = 3e-08
Identities = 28/64 (43%), Positives = 42/64 (65%)
Frame = -3
Query: 515 EGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGL 336
+GE VV+ K F P+++ EAI Q+ + H F+ F N ET ++N+VY+RK+G YGL
Sbjct: 113 KGEEEEFRVVKVKRFAWKPMSIKEAILQMNLLGHNFFVFTNAETEQVNVVYRRKDGNYGL 172
Query: 335 IIPK 324
I P+
Sbjct: 173 IEPE 176
[180][TOP]
>UniRef100_C8WT44 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446 RepID=C8WT44_ALIAC
Length = 180
Score = 62.0 bits (149), Expect = 3e-08
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = -3
Query: 497 VEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
++VVR K F + P+ V EA+ Q+ + H F+ F N ET E+N+VY+R+ G YGLI P+
Sbjct: 122 IKVVRVKRFPIKPMDVEEAVLQMELLGHDFFVFMNAETEEVNVVYRRRSGDYGLIEPQ 179
[181][TOP]
>UniRef100_Q71WR7 Ribosomal subunit interface protein n=9 Tax=Listeria
RepID=Q71WR7_LISMF
Length = 187
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = -3
Query: 527 PLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEG 348
P E EG+ L E+VRTK F + P+ EA+ Q+ + H+FY + + ET NIVY RK+G
Sbjct: 121 PEENEGDFDL-EIVRTKQFSLKPMDSEEAVLQMNLLGHSFYVYTDAETNGTNIVYSRKDG 179
Query: 347 GYGLI 333
YGLI
Sbjct: 180 KYGLI 184
[182][TOP]
>UniRef100_C5RGA6 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Clostridium cellulovorans 743B RepID=C5RGA6_CLOCL
Length = 180
Score = 62.0 bits (149), Expect = 3e-08
Identities = 28/71 (39%), Positives = 48/71 (67%)
Frame = -3
Query: 536 DISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKR 357
+++ E E E+ ++V+TK F + P+ EA+ Q+ + H F+ F ++ET E+N+VYKR
Sbjct: 111 ELAATEVEEES---KIVKTKRFAIKPMNAEEAVLQMELLGHNFFVFMDDETSEVNVVYKR 167
Query: 356 KEGGYGLIIPK 324
K+G +GLI P+
Sbjct: 168 KDGNFGLIEPE 178
[183][TOP]
>UniRef100_C4FCG3 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis
DSM 13280 RepID=C4FCG3_9ACTN
Length = 194
Score = 62.0 bits (149), Expect = 3e-08
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Frame = -3
Query: 554 PLEEDDDISPL---EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEET 384
P+E D++ L E+E + ++VR K ++ P+T EA+ Q + H FY F N T
Sbjct: 113 PVEPVADLADLLLPEDEDD----QLVRVKEVELTPMTDEEALVQTDLIGHDFYVFENSVT 168
Query: 383 GEINIVYKRKEGGYGLIIPK 324
G +N+VY RK GGYG+I PK
Sbjct: 169 GLVNVVYHRKNGGYGIIKPK 188
[184][TOP]
>UniRef100_B9CNR8 Light-repressed protein n=1 Tax=Atopobium rimae ATCC 49626
RepID=B9CNR8_9ACTN
Length = 195
Score = 62.0 bits (149), Expect = 3e-08
Identities = 30/76 (39%), Positives = 45/76 (59%)
Frame = -3
Query: 551 LEEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEIN 372
L +++ + +E E ++VR KY D+ P+T EA+ Q + H FY F N TG N
Sbjct: 114 LSQEELANLIETPAEDLDDQLVREKYIDLLPMTEEEALVQTDLLGHDFYVFVNSTTGLTN 173
Query: 371 IVYKRKEGGYGLIIPK 324
++Y RK GGYG+I P+
Sbjct: 174 VIYHRKNGGYGIIKPR 189
[185][TOP]
>UniRef100_B7DUH5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Alicyclobacillus acidocaldarius LAA1
RepID=B7DUH5_9BACL
Length = 180
Score = 62.0 bits (149), Expect = 3e-08
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = -3
Query: 497 VEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
++VVR K F + P+ V EA+ Q+ + H F+ F N ET E+N+VY+R+ G YGLI P+
Sbjct: 122 IKVVRVKRFPIKPMDVEEAVLQMELLGHDFFVFMNAETEEVNVVYRRRSGDYGLIEPQ 179
[186][TOP]
>UniRef100_A4ECY7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens
ATCC 25986 RepID=A4ECY7_9ACTN
Length = 194
Score = 62.0 bits (149), Expect = 3e-08
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Frame = -3
Query: 554 PLEEDDDISPL---EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEET 384
P+E +D++ L EE+ + +VR K D+ P+T +A+ Q + H FY F N T
Sbjct: 113 PVERVEDLADLLLPEEDDDL----LVREKVIDVTPMTEEQALVQTDLLGHDFYVFENATT 168
Query: 383 GEINIVYKRKEGGYGLIIPK 324
G IN+VY RK GGYG+I P+
Sbjct: 169 GLINVVYHRKNGGYGIIKPR 188
[187][TOP]
>UniRef100_Q97F93 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Clostridium
acetobutylicum RepID=Q97F93_CLOAB
Length = 174
Score = 61.6 bits (148), Expect = 4e-08
Identities = 25/57 (43%), Positives = 42/57 (73%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
E+V+TK F + P++ EA+ ++ + H F+ F+N ++ E+N+VYKRK+G YGLI P+
Sbjct: 117 EIVKTKRFAIKPMSEEEAVLEMELLGHNFFVFQNGDSNEVNVVYKRKDGNYGLIEPE 173
[188][TOP]
>UniRef100_B8CYM6 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Halothermothrix orenii H 168 RepID=B8CYM6_HALOH
Length = 184
Score = 61.6 bits (148), Expect = 4e-08
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = -3
Query: 524 LEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGG 345
L E + +VRTK F + P++V EA Q+ + H F+ F N T ++N+VYKRK+G
Sbjct: 117 LNSEEDEFKPRIVRTKKFAIKPMSVEEAAMQMDLLGHDFFVFTNANTEQVNVVYKRKDGN 176
Query: 344 YGLIIP 327
YGLI P
Sbjct: 177 YGLIEP 182
[189][TOP]
>UniRef100_A9W9Y4 Ribosomal subunit interface protein n=2 Tax=Chloroflexus
RepID=A9W9Y4_CHLAA
Length = 197
Score = 61.6 bits (148), Expect = 4e-08
Identities = 28/69 (40%), Positives = 48/69 (69%)
Frame = -3
Query: 530 SPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKE 351
+P E EA V+RTK F + P+ V +AIEQ+ + H F+ F++ ET +++++Y+R++
Sbjct: 130 TPTEVGSEA---RVIRTKTFRLRPMFVDDAIEQMELLGHNFFVFQDAETMQVSVLYRRRD 186
Query: 350 GGYGLIIPK 324
G YG+IIP+
Sbjct: 187 GNYGVIIPE 195
[190][TOP]
>UniRef100_A9BE19 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9211 RepID=A9BE19_PROM4
Length = 197
Score = 61.6 bits (148), Expect = 4e-08
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = -3
Query: 488 VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
+R KYF MPP++ +A QL +DH FY F+ ET ++ ++Y+R GGYG+I K
Sbjct: 140 IRRKYFSMPPMSTEQARHQLDLIDHDFYMFKEIETQQLQVIYRRTHGGYGIIQAK 194
[191][TOP]
>UniRef100_C4V4X1 Ribosome-associated inhibitor A n=1 Tax=Selenomonas flueggei ATCC
43531 RepID=C4V4X1_9FIRM
Length = 181
Score = 61.6 bits (148), Expect = 4e-08
Identities = 32/65 (49%), Positives = 43/65 (66%)
Frame = -3
Query: 527 PLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEG 348
P+ EE E L VV+TK F + P+ V EAI Q+ ++H F+ FRN E+ E+NIVY R +G
Sbjct: 114 PIPEEDE--LYPVVKTKRFTLQPMDVQEAIMQMNLLNHHFFVFRNAESEEVNIVYGRHDG 171
Query: 347 GYGLI 333
Y LI
Sbjct: 172 KYALI 176
[192][TOP]
>UniRef100_C4CGR1 SSU ribosomal protein S30P n=1 Tax=Sphaerobacter thermophilus DSM
20745 RepID=C4CGR1_9CHLR
Length = 194
Score = 61.6 bits (148), Expect = 4e-08
Identities = 30/77 (38%), Positives = 47/77 (61%)
Frame = -3
Query: 554 PLEEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEI 375
P+ D + EEE E +VR K F + P++ EAIEQ+ + H F+ F N + EI
Sbjct: 116 PVSTLDGLDVAEEEEETPSELLVRRKRFKIQPMSEEEAIEQMELLGHDFFVFFNPDLAEI 175
Query: 374 NIVYKRKEGGYGLIIPK 324
N++Y+R++G YG+I P+
Sbjct: 176 NVLYRRRDGLYGVIQPE 192
[193][TOP]
>UniRef100_C3WBJ3 Sigma(54) modulation protein n=1 Tax=Fusobacterium mortiferum ATCC
9817 RepID=C3WBJ3_FUSMR
Length = 183
Score = 61.6 bits (148), Expect = 4e-08
Identities = 33/72 (45%), Positives = 45/72 (62%)
Frame = -3
Query: 542 DDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVY 363
D + + +E+E +V+V Y P+ V EAI QL ++ AF+ F N ETGE+NIVY
Sbjct: 113 DPETNTVEKEAAVNVVKV----YLPPKPMDVEEAILQLEILNRAFFPFTNAETGEMNIVY 168
Query: 362 KRKEGGYGLIIP 327
KRK+G YG I P
Sbjct: 169 KRKDGDYGHIEP 180
[194][TOP]
>UniRef100_A8S366 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
BAA-613 RepID=A8S366_9CLOT
Length = 187
Score = 61.6 bits (148), Expect = 4e-08
Identities = 30/76 (39%), Positives = 46/76 (60%)
Frame = -3
Query: 551 LEEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEIN 372
+EE+D++ E +++V+TK F + P EA Q+ + H FY F N +T ++N
Sbjct: 118 IEEEDEVQDDE-------IQIVKTKKFAIKPTIPEEACLQMEMLGHNFYVFLNADTDQVN 170
Query: 371 IVYKRKEGGYGLIIPK 324
+VYKRK G YGLI P+
Sbjct: 171 VVYKRKNGTYGLIEPE 186
[195][TOP]
>UniRef100_C6YXL0 Protein kinase n=1 Tax=Oryza sativa Japonica Group
RepID=C6YXL0_ORYSJ
Length = 321
Score = 61.6 bits (148), Expect = 4e-08
Identities = 29/72 (40%), Positives = 45/72 (62%)
Frame = -3
Query: 518 EEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYG 339
E+ + L VVRTK F+MPPL+ EA+EQL N DH F+A + G +++ G +G
Sbjct: 223 EDEDTVLTRVVRTKVFEMPPLSGEEAMEQLGNGDHTFHALPRRKNGGDEPPVQKEGGRFG 282
Query: 338 LIIPKGNGQAEK 303
I+P+G+G ++
Sbjct: 283 PIVPQGDGPLQR 294
[196][TOP]
>UniRef100_Q9K6W6 Ribosomal protein S30AE family n=1 Tax=Bacillus halodurans
RepID=Q9K6W6_BACHD
Length = 187
Score = 61.2 bits (147), Expect = 5e-08
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Frame = -3
Query: 539 DDISPLEEEGEATLVE------VVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGE 378
+D+ P++ E L+E VVR K F++ P+ EAI Q+ + H F+ F N +G+
Sbjct: 110 NDLEPMDGMREEILLEEEDDLQVVRKKRFNLKPMDTEEAILQMDMLGHNFFVFSNAISGD 169
Query: 377 INIVYKRKEGGYGLIIPK 324
N+VY+RK+G YGLI P+
Sbjct: 170 TNVVYRRKDGKYGLIEPE 187
[197][TOP]
>UniRef100_C4FR72 Putative uncharacterized protein n=1 Tax=Veillonella dispar ATCC
17748 RepID=C4FR72_9FIRM
Length = 175
Score = 61.2 bits (147), Expect = 5e-08
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = -3
Query: 530 SPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKE 351
+P+EEE +EVV+ K+F + P+ V EAI Q+ + H F+ F N ET +N+VY+R +
Sbjct: 109 APVEEE----TIEVVKRKHFAVRPMDVEEAILQMNLIGHDFFMFFNAETEAMNVVYRRHD 164
Query: 350 GGYGLIIPK 324
G YGLI P+
Sbjct: 165 GFYGLIEPE 173
[198][TOP]
>UniRef100_C1XVX9 SSU ribosomal protein S30P; sigma 54 modulation protein n=1
Tax=Meiothermus silvanus DSM 9946 RepID=C1XVX9_9DEIN
Length = 184
Score = 61.2 bits (147), Expect = 5e-08
Identities = 29/68 (42%), Positives = 45/68 (66%)
Frame = -3
Query: 530 SPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKE 351
+P E E E ++VRTK F M P++ +A ++ + H F+ FRN ET +IN++Y+R++
Sbjct: 116 TPPESETEEG-PQIVRTKRFAMKPMSPEDAAFEMEALGHDFFVFRNAETEDINVIYRRRD 174
Query: 350 GGYGLIIP 327
G YGLI P
Sbjct: 175 GNYGLIEP 182
[199][TOP]
>UniRef100_B8BRE6 Light-repressed protein a n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8BRE6_THAPS
Length = 198
Score = 61.2 bits (147), Expect = 5e-08
Identities = 33/76 (43%), Positives = 45/76 (59%)
Frame = -3
Query: 551 LEEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEIN 372
+E D+ EEE + V TK P+++ EAI L +DH FY FR+EET E++
Sbjct: 123 IEVDESEDGAEEESYIDPDQAVVTKV-KSTPISIKEAIFALDYIDHDFYVFRDEETNEVS 181
Query: 371 IVYKRKEGGYGLIIPK 324
+VYKR GG GLI P+
Sbjct: 182 VVYKRNAGGVGLIQPE 197
[200][TOP]
>UniRef100_Q7VDH9 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus
RepID=Q7VDH9_PROMA
Length = 195
Score = 60.8 bits (146), Expect = 6e-08
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = -3
Query: 551 LEEDDDISPLEEEGEATLVEV-VRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEI 375
LE+ L E EA L + +R KYF M P+ + +A QL +DH FY F+ E+ ++
Sbjct: 118 LEDKSINGSLVEGKEAKLPKPGIRRKYFPMHPMNIEQAQHQLDLIDHDFYLFKEAESEQL 177
Query: 374 NIVYKRKEGGYGLIIPK 324
++Y+RK GGYG+I K
Sbjct: 178 QVIYRRKNGGYGVIQAK 194
[201][TOP]
>UniRef100_Q5KV92 Ribosomal protein S30EA n=1 Tax=Geobacillus kaustophilus
RepID=Q5KV92_GEOKA
Length = 183
Score = 60.8 bits (146), Expect = 6e-08
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLI 333
E+VRTK+F + P+ EAI Q+ + H F+ F N ET NIVY+RK+G YGLI
Sbjct: 127 EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTNIVYRRKDGKYGLI 180
[202][TOP]
>UniRef100_C4Z2Z4 Putative sigma-54 modulation protein n=1 Tax=Eubacterium eligens
ATCC 27750 RepID=C4Z2Z4_EUBE2
Length = 175
Score = 60.8 bits (146), Expect = 6e-08
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = -3
Query: 524 LEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGG 345
+E++ + V+++RTK F + P+ EA Q+ + H FY F N ET E+N+VYKRK
Sbjct: 107 VEKDYDDDEVKIIRTKRFGIKPMDPEEACVQMELLGHNFYVFFNSETEEVNVVYKRKGNT 166
Query: 344 YGLIIPK 324
YGLI P+
Sbjct: 167 YGLIEPE 173
[203][TOP]
>UniRef100_B1I6C1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Candidatus Desulforudis audaxviator MP104C
RepID=B1I6C1_DESAP
Length = 174
Score = 60.8 bits (146), Expect = 6e-08
Identities = 25/55 (45%), Positives = 39/55 (70%)
Frame = -3
Query: 491 VVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIP 327
+VRTK F + P+ V EA+ Q+ + H+F+ F N E ++N++Y+RK+G YGLI P
Sbjct: 117 IVRTKRFALKPMPVDEAVMQMNLLGHSFFVFANAENQQVNVIYRRKDGHYGLIEP 171
[204][TOP]
>UniRef100_B0S0M8 30S ribosomal protein S30AE family n=1 Tax=Finegoldia magna ATCC
29328 RepID=B0S0M8_FINM2
Length = 179
Score = 60.8 bits (146), Expect = 6e-08
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = -3
Query: 491 VVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIP 327
+V+TK F + P+ EAI Q+ +DH F+ F + +T +N+VYKR +G YGL++P
Sbjct: 121 IVKTKEFGIKPMDKEEAIMQMELIDHDFFVFLDSKTNNVNVVYKRNDGNYGLLVP 175
[205][TOP]
>UniRef100_A4ISU0 Ribosomal subunit interface protein n=1 Tax=Geobacillus
thermodenitrificans NG80-2 RepID=A4ISU0_GEOTN
Length = 182
Score = 60.8 bits (146), Expect = 6e-08
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLI 333
E+VRTK+F + P+ EAI Q+ + H F+ F N ET NIVY+RK+G YGLI
Sbjct: 126 EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTNIVYRRKDGRYGLI 179
[206][TOP]
>UniRef100_C8VY36 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Desulfotomaculum acetoxidans DSM 771
RepID=C8VY36_9FIRM
Length = 177
Score = 60.8 bits (146), Expect = 6e-08
Identities = 25/57 (43%), Positives = 41/57 (71%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
+++R K F+M P++V EA+ Q+ + H+F+ F N ++ N+VYKRK+G YGLI P+
Sbjct: 120 KILRNKRFNMKPMSVEEAVLQMNLLGHSFFVFSNADSDRANVVYKRKDGNYGLIEPE 176
[207][TOP]
>UniRef100_C9RVC1 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Geobacillus RepID=C9RVC1_9BACI
Length = 182
Score = 60.8 bits (146), Expect = 6e-08
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLI 333
E+VRTK+F + P+ EAI Q+ + H F+ F N ET NIVY+RK+G YGLI
Sbjct: 126 EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTNIVYRRKDGKYGLI 179
[208][TOP]
>UniRef100_C2AWR2 Sigma 54 modulation protein; SSU ribosomal protein S30P n=1
Tax=Veillonella parvula DSM 2008 RepID=C2AWR2_9FIRM
Length = 175
Score = 60.8 bits (146), Expect = 6e-08
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = -3
Query: 530 SPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKE 351
+P+EEE +EVV+ K+F + P+ V EAI Q+ + H F+ F N ET +N+VY+R +
Sbjct: 109 APVEEE----TIEVVKRKHFVVRPMDVEEAILQMNLIGHDFFMFFNAETEAMNVVYRRHD 164
Query: 350 GGYGLIIPK 324
G YGLI P+
Sbjct: 165 GFYGLIEPE 173
[209][TOP]
>UniRef100_C0CVD1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme
DSM 15981 RepID=C0CVD1_9CLOT
Length = 176
Score = 60.8 bits (146), Expect = 6e-08
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
EE+ + + +V+TK F + P EA Q+ + H FY F N +T ++N+VYKRK G Y
Sbjct: 110 EEDEQEDDIRIVKTKKFAIKPTIPEEACLQMEMLGHNFYVFLNSDTDQVNVVYKRKNGTY 169
Query: 341 GLIIPK 324
GLI P+
Sbjct: 170 GLIEPE 175
[210][TOP]
>UniRef100_B4BN91 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacillus sp. G11MC16 RepID=B4BN91_9BACI
Length = 182
Score = 60.8 bits (146), Expect = 6e-08
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLI 333
E+VRTK+F + P+ EAI Q+ + H F+ F N ET NIVY+RK+G YGLI
Sbjct: 126 EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTNIVYRRKDGRYGLI 179
[211][TOP]
>UniRef100_B0PAJ5 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis
DSM 17241 RepID=B0PAJ5_9FIRM
Length = 178
Score = 60.8 bits (146), Expect = 6e-08
Identities = 27/56 (48%), Positives = 38/56 (67%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIP 327
+V R K F + P+ + EAI Q+ V+H F+ F N E+ EIN+VYKR+ G YGL+ P
Sbjct: 120 DVKRVKRFTLRPMDIDEAILQMNLVEHEFFVFLNAESNEINVVYKRRNGAYGLLEP 175
[212][TOP]
>UniRef100_P28368 Uncharacterized protein yvyD n=1 Tax=Bacillus subtilis
RepID=YVYD_BACSU
Length = 189
Score = 60.8 bits (146), Expect = 6e-08
Identities = 30/75 (40%), Positives = 45/75 (60%)
Frame = -3
Query: 551 LEEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEIN 372
L D DI+ ++ E +++VR K F++ P+ EAI Q+ + H F+ F N ET N
Sbjct: 113 LGSDTDIAVQDDIEEEESLDIVRQKRFNLKPMDSEEAILQMNMLGHNFFVFTNAETNLTN 172
Query: 371 IVYKRKEGGYGLIIP 327
+VY+R +G YGLI P
Sbjct: 173 VVYRRNDGKYGLIEP 187
[213][TOP]
>UniRef100_Q5M196 Ribosomal subunit interface protein, ribosomal protein S30AE family
n=2 Tax=Streptococcus thermophilus RepID=Q5M196_STRT1
Length = 182
Score = 60.5 bits (145), Expect = 8e-08
Identities = 30/66 (45%), Positives = 42/66 (63%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
EE EA VEVVRTK ++ P+ V EAI Q+ + H F+ + + E N++YKR++G Y
Sbjct: 117 EEVEEAPAVEVVRTKNIELKPMDVEEAILQMELLGHDFFIYTDSEDHTTNVLYKREDGNY 176
Query: 341 GLIIPK 324
GLI K
Sbjct: 177 GLIEAK 182
[214][TOP]
>UniRef100_A0Q2Y0 Ribosomal subunit interface protein n=1 Tax=Clostridium novyi NT
RepID=A0Q2Y0_CLONN
Length = 178
Score = 60.5 bits (145), Expect = 8e-08
Identities = 26/57 (45%), Positives = 41/57 (71%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
++V+TK F + P++ EA+ Q+ + H F+ F N ET E+N++YKRK+G YGLI P+
Sbjct: 121 KIVKTKRFAIKPMSREEAVLQMELLGHNFFVFTNAETEEVNVLYKRKDGQYGLIEPE 177
[215][TOP]
>UniRef100_C1TPS4 SSU ribosomal protein S30P n=1 Tax=Dethiosulfovibrio peptidovorans
DSM 11002 RepID=C1TPS4_9BACT
Length = 182
Score = 60.5 bits (145), Expect = 8e-08
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = -3
Query: 524 LEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGG 345
+EE+ E ++V+ K F + P++ EA Q+ + H+F+ F N E+G +N+VYKRK GG
Sbjct: 119 VEEKDE----KIVKVKKFPLRPMSAEEACMQMDLLGHSFFIFSNVESGSMNVVYKRKSGG 174
Query: 344 YGLIIP 327
YGL+ P
Sbjct: 175 YGLLEP 180
[216][TOP]
>UniRef100_B0MGZ9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM
14662 RepID=B0MGZ9_9FIRM
Length = 176
Score = 60.5 bits (145), Expect = 8e-08
Identities = 30/76 (39%), Positives = 49/76 (64%)
Frame = -3
Query: 551 LEEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEIN 372
+++D+D+ E+E + ++R+K F + P+ V EA Q+ + H F+ FRN +T E+N
Sbjct: 107 IDKDEDVD--EDE-----IRIIRSKKFAIKPMDVEEACIQMDLLGHNFFVFRNADTFEVN 159
Query: 371 IVYKRKEGGYGLIIPK 324
+VYKRK YGLI P+
Sbjct: 160 VVYKRKGNTYGLIEPE 175
[217][TOP]
>UniRef100_A7VDW4 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50
RepID=A7VDW4_9CLOT
Length = 170
Score = 60.5 bits (145), Expect = 8e-08
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
EE E +++VR K F + P+ +A Q+ + H FY FRN ET E+N+VYKRK Y
Sbjct: 104 EETDEDDEIKIVRCKKFAVKPMYPEDACIQMDLLGHNFYVFRNAETEEVNVVYKRKGNTY 163
Query: 341 GLIIPK 324
GLI P+
Sbjct: 164 GLIEPE 169
[218][TOP]
>UniRef100_B7GE66 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B7GE66_PHATR
Length = 209
Score = 60.5 bits (145), Expect = 8e-08
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Frame = -3
Query: 551 LEEDDDISPL------EEEGEATLVEVVRTKYFDMP-PLTVSEAIEQLVNVDHAFYAFRN 393
LE +D+S EE + + + K FD+ P++V EA+ L +DH FY FRN
Sbjct: 128 LENLEDVSEYTATPVAEEYVDPEAPTITKVKNFDLTKPMSVQEAVFALDYIDHDFYVFRN 187
Query: 392 EETGEINIVYKRKEGGYGLIIP 327
ET EI++VYKR GG GL+ P
Sbjct: 188 AETNEISVVYKRHVGGIGLVEP 209
[219][TOP]
>UniRef100_Q3AFQ6 Ribosomal subunit interface protein n=1 Tax=Carboxydothermus
hydrogenoformans Z-2901 RepID=Q3AFQ6_CARHZ
Length = 177
Score = 60.1 bits (144), Expect = 1e-07
Identities = 25/58 (43%), Positives = 42/58 (72%)
Frame = -3
Query: 497 VEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
+++V++K F + P++ EA Q+ + H+F+ F N +T EIN+VYKR++G YGLI P+
Sbjct: 119 IKIVKSKRFAIKPMSPEEAAMQMELLGHSFFVFTNADTDEINVVYKRRDGKYGLIEPE 176
[220][TOP]
>UniRef100_B9MLV8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Anaerocellum thermophilum DSM 6725
RepID=B9MLV8_ANATD
Length = 181
Score = 60.1 bits (144), Expect = 1e-07
Identities = 26/66 (39%), Positives = 44/66 (66%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
E + E + + +TK F + P++V EAI Q+ + H F+ F N++T ++N+VY+R +G Y
Sbjct: 115 EVQEENSEFRIAKTKRFPIKPMSVEEAILQMNLLGHNFFVFLNQDTDKVNVVYRRNDGAY 174
Query: 341 GLIIPK 324
GLI P+
Sbjct: 175 GLIEPE 180
[221][TOP]
>UniRef100_B8E0U8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E0U8_DICTD
Length = 179
Score = 60.1 bits (144), Expect = 1e-07
Identities = 30/65 (46%), Positives = 43/65 (66%)
Frame = -3
Query: 524 LEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGG 345
L EE + EVV+ K F + P+ + EAI Q+ + H F+ FR+ ET +I +VYKRK+G
Sbjct: 111 LIEETKEEKPEVVKVKRFLLKPMDLEEAILQMELLGHDFFIFRDAETDKIEVVYKRKDGK 170
Query: 344 YGLII 330
YGLI+
Sbjct: 171 YGLIV 175
[222][TOP]
>UniRef100_A9AY42 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Herpetosiphon aurantiacus ATCC 23779
RepID=A9AY42_HERA2
Length = 186
Score = 60.1 bits (144), Expect = 1e-07
Identities = 26/66 (39%), Positives = 44/66 (66%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
E+ +A +++R K + P+ EAIEQ+ + H+F+ FR+ ET +I +VY+R +G Y
Sbjct: 121 EDAEQAEERQIIRAKEVTLRPMFSDEAIEQMELLGHSFFVFRDAETEKIQVVYRRNDGNY 180
Query: 341 GLIIPK 324
GLI+P+
Sbjct: 181 GLIMPR 186
[223][TOP]
>UniRef100_A0ALJ5 YfiA protein n=2 Tax=Listeria RepID=A0ALJ5_LISW6
Length = 187
Score = 60.1 bits (144), Expect = 1e-07
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = -3
Query: 530 SPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKE 351
+P EE +E+VRTK F + P+ EA+ Q+ + H+FY + + ET NIVY RK+
Sbjct: 119 TPPEENESDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFYVYTDAETNGTNIVYSRKD 178
Query: 350 GGYGLI 333
G YGLI
Sbjct: 179 GKYGLI 184
[224][TOP]
>UniRef100_C9KNJ3 Ribosomal subunit interface protein n=1 Tax=Mitsuokella multacida
DSM 20544 RepID=C9KNJ3_9FIRM
Length = 181
Score = 60.1 bits (144), Expect = 1e-07
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Frame = -3
Query: 530 SPLEE-EGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRK 354
SP+ + E+ +VV+TK+F + P+ V EAI ++ ++H F+ FR+ ET +N+VY+R
Sbjct: 111 SPMPDVHDESDTYKVVKTKHFIVKPMDVQEAIMEMNLLNHNFFVFRDAETEAVNVVYRRD 170
Query: 353 EGGYGLI 333
+G YGLI
Sbjct: 171 DGNYGLI 177
[225][TOP]
>UniRef100_B0G387 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC
27755 RepID=B0G387_9FIRM
Length = 177
Score = 60.1 bits (144), Expect = 1e-07
Identities = 29/66 (43%), Positives = 42/66 (63%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
EE E V++VRTK F + P+ +A Q+ + H F+ F N E E+N+VYKRK+G +
Sbjct: 110 EESIEDDEVKIVRTKRFGIKPMYPEDACVQMELLGHNFFVFFNAENEEVNVVYKRKDGSF 169
Query: 341 GLIIPK 324
GLI P+
Sbjct: 170 GLIEPE 175
[226][TOP]
>UniRef100_A6BHR0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM
13814 RepID=A6BHR0_9FIRM
Length = 178
Score = 60.1 bits (144), Expect = 1e-07
Identities = 28/67 (41%), Positives = 44/67 (65%)
Frame = -3
Query: 524 LEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGG 345
+E++GE +++VRTK F P+ +A Q+ + H FY F N E+ E+N+VY+RK G
Sbjct: 113 IEDDGE---IKIVRTKKFGFKPMYPEDACVQMELLGHDFYVFCNAESDEVNVVYRRKNGT 169
Query: 344 YGLIIPK 324
+GLI P+
Sbjct: 170 FGLIEPE 176
[227][TOP]
>UniRef100_C6LIX7 Ribosomal subunit interface protein n=1 Tax=Bryantella
formatexigens DSM 14469 RepID=C6LIX7_9FIRM
Length = 176
Score = 59.7 bits (143), Expect = 1e-07
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
EE E V ++RTK+F + P+ +A Q+ + H F+ F N ET E+N+VYKRK Y
Sbjct: 110 EETVEPEEVNIIRTKHFGIKPMYPEDACIQMELLGHNFFVFCNAETEEVNVVYKRKGNTY 169
Query: 341 GLIIPK 324
GLI P+
Sbjct: 170 GLIEPE 175
[228][TOP]
>UniRef100_C2LVK8 Ribosomal subunit interface protein n=1 Tax=Staphylococcus hominis
SK119 RepID=C2LVK8_STAHO
Length = 191
Score = 59.7 bits (143), Expect = 1e-07
Identities = 26/70 (37%), Positives = 42/70 (60%)
Frame = -3
Query: 542 DDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVY 363
++D+ E +E++R+K F + P+ EA+ Q+ + H FY F + ET +IVY
Sbjct: 118 NEDVEATSESSNENEIEIIRSKQFSLKPMDSEEAVLQMDLLGHDFYIFTDRETDGTSIVY 177
Query: 362 KRKEGGYGLI 333
+RK+G YGLI
Sbjct: 178 RRKDGKYGLI 187
[229][TOP]
>UniRef100_C0WCZ2 Sigma-54 modulation protein n=1 Tax=Acidaminococcus sp. D21
RepID=C0WCZ2_9FIRM
Length = 180
Score = 59.7 bits (143), Expect = 1e-07
Identities = 30/71 (42%), Positives = 44/71 (61%)
Frame = -3
Query: 536 DISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKR 357
D+ +GE +V RTK + M P+ V EAI Q+ ++H F+ F N+ET + +VY+R
Sbjct: 111 DVEEASADGE---FKVARTKTYAMRPMNVQEAIMQMNMLNHDFFVFFNDETESMAVVYRR 167
Query: 356 KEGGYGLIIPK 324
K G YGLI P+
Sbjct: 168 KAGDYGLINPE 178
[230][TOP]
>UniRef100_C0FTS3 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans
DSM 16841 RepID=C0FTS3_9FIRM
Length = 176
Score = 59.7 bits (143), Expect = 1e-07
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = -3
Query: 497 VEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
++++RTK FDM P+ +A ++ + H FY F N ET ++N+VYKRK YGLI P+
Sbjct: 118 IKIIRTKKFDMKPMYPEDACVEMELLGHDFYVFINAETEDVNVVYKRKGNTYGLIEPE 175
[231][TOP]
>UniRef100_C4ZI34 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Eubacterium rectale
ATCC 33656 RepID=C4ZI34_EUBR3
Length = 175
Score = 59.3 bits (142), Expect = 2e-07
Identities = 31/74 (41%), Positives = 44/74 (59%)
Frame = -3
Query: 545 EDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIV 366
+DD + + E E +++VRTK F M P+ +A Q+ H F+ FRN E E+N+V
Sbjct: 103 QDDFVEADDAEDEE--IKIVRTKRFGMKPMYPEDACIQMELSGHDFFVFRNAENDEVNVV 160
Query: 365 YKRKEGGYGLIIPK 324
YKRK YGLI P+
Sbjct: 161 YKRKGHTYGLIEPE 174
[232][TOP]
>UniRef100_Q1K310 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Desulfuromonas acetoxidans DSM 684
RepID=Q1K310_DESAC
Length = 182
Score = 59.3 bits (142), Expect = 2e-07
Identities = 23/57 (40%), Positives = 41/57 (71%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
+V+R+ F + P++V EA+ Q+ + F F +++T E+N++Y+RK+G YGLI+PK
Sbjct: 125 KVIRSHSFSIKPMSVDEAVMQMDLLQKEFLVFTDDDTEEVNVIYRRKDGNYGLIVPK 181
[233][TOP]
>UniRef100_C2LQ50 Ribosomal subunit interface protein, ribosomal protein S30AE family
n=1 Tax=Streptococcus salivarius SK126
RepID=C2LQ50_STRSL
Length = 182
Score = 59.3 bits (142), Expect = 2e-07
Identities = 29/66 (43%), Positives = 42/66 (63%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
E+ EA VEVVRTK ++ P+ V EAI Q+ + H F+ + + E N++YKR++G Y
Sbjct: 117 EQVEEAPAVEVVRTKNIELKPMDVEEAILQMELLGHDFFIYTDSEDHTTNVLYKREDGNY 176
Query: 341 GLIIPK 324
GLI K
Sbjct: 177 GLIEAK 182
[234][TOP]
>UniRef100_A8FHW6 Ribosome-associated inhibitor A n=2 Tax=Bacillus pumilus
RepID=A8FHW6_BACP2
Length = 187
Score = 59.3 bits (142), Expect = 2e-07
Identities = 27/66 (40%), Positives = 42/66 (63%)
Frame = -3
Query: 524 LEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGG 345
++++ E E+VR K F++ P+ EAI Q+ + H+F+ F N ET N+VY+R +G
Sbjct: 120 VQDDEEIDETEIVRQKRFNLKPMDSEEAILQMNMLGHSFFVFTNAETNLTNVVYRRNDGK 179
Query: 344 YGLIIP 327
YGLI P
Sbjct: 180 YGLIEP 185
[235][TOP]
>UniRef100_B1B8N8 Ribosomal subunit interface protein n=1 Tax=Clostridium botulinum C
str. Eklund RepID=B1B8N8_CLOBO
Length = 184
Score = 59.3 bits (142), Expect = 2e-07
Identities = 25/57 (43%), Positives = 41/57 (71%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
++V+TK F + P++ EA+ Q+ + H F+ F N +T E+N++YKRK+G YGLI P+
Sbjct: 127 KIVKTKRFAIKPMSKEEAVLQMELLGHNFFVFTNGDTEEVNVLYKRKDGQYGLIEPE 183
[236][TOP]
>UniRef100_B0NJJ3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
35704 RepID=B0NJJ3_EUBSP
Length = 179
Score = 59.3 bits (142), Expect = 2e-07
Identities = 28/66 (42%), Positives = 43/66 (65%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
E++GE +++VRTK F P+ +A Q+ + H F+ F N ET E+N+VY+RK G +
Sbjct: 115 EDDGE---IKIVRTKKFGFKPMYPEDACVQMELLGHDFFVFCNAETDEVNVVYRRKNGTF 171
Query: 341 GLIIPK 324
GLI P+
Sbjct: 172 GLIEPE 177
[237][TOP]
>UniRef100_A6CQE4 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. SG-1
RepID=A6CQE4_9BACI
Length = 189
Score = 59.3 bits (142), Expect = 2e-07
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLI 333
EVVRTK F++ P+ EAI Q+ + H+F+ F + ET NIVYKR++G YGLI
Sbjct: 133 EVVRTKQFNLKPMDSEEAILQMNLLGHSFFIFTDAETNATNIVYKRRDGKYGLI 186
[238][TOP]
>UniRef100_Q4L4H7 Uncharacterized protein SH2139 n=1 Tax=Staphylococcus haemolyticus
JCSC1435 RepID=Y2139_STAHJ
Length = 192
Score = 59.3 bits (142), Expect = 2e-07
Identities = 30/74 (40%), Positives = 45/74 (60%)
Frame = -3
Query: 554 PLEEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEI 375
P E DD++ E + +E++R+K F + P+ EA+ Q+ + H FY F + ET
Sbjct: 117 PPENVDDVNA--EPTNDSEIEIIRSKQFSLKPMDSEEAVLQMELLGHDFYIFTDRETDGT 174
Query: 374 NIVYKRKEGGYGLI 333
+IVYKRK+G YGLI
Sbjct: 175 SIVYKRKDGKYGLI 188
[239][TOP]
>UniRef100_B1HN67 Hypothetical yvyD protein n=1 Tax=Lysinibacillus sphaericus C3-41
RepID=B1HN67_LYSSC
Length = 183
Score = 58.9 bits (141), Expect = 2e-07
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = -3
Query: 491 VVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLI 333
+VRTK FD+ P+ EA+ Q+ + H FY F + E+ NIVYKRK+G YGLI
Sbjct: 128 IVRTKQFDLKPMDQEEAVLQMNMLGHDFYVFTDAESNGTNIVYKRKDGKYGLI 180
[240][TOP]
>UniRef100_D0BMS6 Ribosomal subunit interface protein n=1 Tax=Granulicatella elegans
ATCC 700633 RepID=D0BMS6_9LACT
Length = 182
Score = 58.9 bits (141), Expect = 2e-07
Identities = 27/65 (41%), Positives = 46/65 (70%)
Frame = -3
Query: 527 PLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEG 348
P++E+ +++E+VRTK D+ P+ EA+ Q+ + H F+ +++ ET E +IVY+RK+G
Sbjct: 116 PVDED--ESVLEIVRTKRVDLKPMDSEEAVLQMNMLGHNFFIYQDAETNETHIVYRRKDG 173
Query: 347 GYGLI 333
YGLI
Sbjct: 174 KYGLI 178
[241][TOP]
>UniRef100_C0EWH6 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM
3353 RepID=C0EWH6_9FIRM
Length = 175
Score = 58.9 bits (141), Expect = 2e-07
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = -3
Query: 497 VEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLIIPK 324
V + ++K F + P+ V EA Q+ + H F+ FRN ET E+N+VYKRK+ YGLI P+
Sbjct: 117 VTITKSKRFAIKPMDVEEACVQMELLGHNFFVFRNAETFEVNVVYKRKDKTYGLIEPE 174
[242][TOP]
>UniRef100_A3IC40 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. B14905
RepID=A3IC40_9BACI
Length = 183
Score = 58.9 bits (141), Expect = 2e-07
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = -3
Query: 491 VVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLI 333
+VRTK FD+ P+ EA+ Q+ + H FY F + E+ NIVYKRK+G YGLI
Sbjct: 128 IVRTKQFDLKPMDQEEAVLQMNMLGHDFYVFTDAESNGTNIVYKRKDGKYGLI 180
[243][TOP]
>UniRef100_Q04E96 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Oenococcus oeni PSU-1 RepID=Q04E96_OENOB
Length = 190
Score = 58.5 bits (140), Expect = 3e-07
Identities = 26/74 (35%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = -3
Query: 551 LEEDDDISPLEEE-GEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEI 375
++ ++ I P+ + E ++V+R K + P+ + EA+ Q+ +DH F+ F N +T ++
Sbjct: 108 IDFNEAIDPVPSDTNEDKKIDVIRRKNLSLKPMDIEEAVLQMEMLDHDFFLFLNSDTNQL 167
Query: 374 NIVYKRKEGGYGLI 333
+IVYKR +G YGLI
Sbjct: 168 DIVYKRDDGKYGLI 181
[244][TOP]
>UniRef100_Q03GZ9 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Pediococcus pentosaceus ATCC 25745
RepID=Q03GZ9_PEDPA
Length = 184
Score = 58.5 bits (140), Expect = 3e-07
Identities = 26/64 (40%), Positives = 43/64 (67%)
Frame = -3
Query: 524 LEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGG 345
+E E EA+ ++VRTK + P+ EAI Q+ + H F+ + + E+G ++IVY+R++G
Sbjct: 116 VENEEEASQFDIVRTKQVSLKPMGSEEAILQMDMLGHNFFIYEDAESGSVDIVYRRRDGR 175
Query: 344 YGLI 333
YGLI
Sbjct: 176 YGLI 179
[245][TOP]
>UniRef100_C5CEL9 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEL9_KOSOT
Length = 178
Score = 58.5 bits (140), Expect = 3e-07
Identities = 28/73 (38%), Positives = 44/73 (60%)
Frame = -3
Query: 551 LEEDDDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEIN 372
LE ++ EE G +++ RTK F + P+ + EA+ Q+ + H F+ FRN +T E+N
Sbjct: 106 LEAIPEVPDEEERG----LQITRTKRFSIKPMKIDEALLQMEMLGHTFFVFRNVDTDEVN 161
Query: 371 IVYKRKEGGYGLI 333
++Y RK G GLI
Sbjct: 162 VLYLRKNGTVGLI 174
[246][TOP]
>UniRef100_B5YF17 Ribosomal subunit interface protein n=1 Tax=Dictyoglomus
thermophilum H-6-12 RepID=B5YF17_DICT6
Length = 179
Score = 58.5 bits (140), Expect = 3e-07
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = -3
Query: 494 EVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGYGLII 330
+VV+ K F + P+ V EAI Q+ + H F+ FR+ ET I +VYKRK+G YGLII
Sbjct: 121 QVVKVKRFLLKPMDVEEAILQMELLGHDFFIFRDAETDRIGVVYKRKDGKYGLII 175
[247][TOP]
>UniRef100_B2TK14 Ribosome-associated protein Y n=3 Tax=Clostridium botulinum
RepID=B2TK14_CLOBB
Length = 177
Score = 58.5 bits (140), Expect = 3e-07
Identities = 26/71 (36%), Positives = 48/71 (67%)
Frame = -3
Query: 536 DISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKR 357
D+SP+ + E ++V+ K F + P+ + EAI Q+ V H F+ +++ ++ +IN++YKR
Sbjct: 107 DLSPVAVDEEEA--KLVKRKRFGVKPMDIDEAILQMELVGHNFFVYQDVDSNKINVIYKR 164
Query: 356 KEGGYGLIIPK 324
K+G YGL+ P+
Sbjct: 165 KDGDYGLLDPE 175
[248][TOP]
>UniRef100_C1P990 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Bacillus coagulans 36D1 RepID=C1P990_BACCO
Length = 187
Score = 58.5 bits (140), Expect = 3e-07
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = -3
Query: 521 EEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGGY 342
EE+ E +++VRTK+F++ P+ EA+ Q+ + H F+ + + ET NIVY+RK+G Y
Sbjct: 125 EEDSE---LQIVRTKHFNLKPMDSEEAVLQMNLLGHNFFIYTDAETNHTNIVYRRKDGKY 181
Query: 341 GLIIPK 324
GLI K
Sbjct: 182 GLIETK 187
[249][TOP]
>UniRef100_C1I442 30S ribosomal protein S30AE family n=1 Tax=Clostridium sp.
7_2_43FAA RepID=C1I442_9CLOT
Length = 178
Score = 58.5 bits (140), Expect = 3e-07
Identities = 27/66 (40%), Positives = 43/66 (65%)
Frame = -3
Query: 524 LEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGG 345
L +E T EVV+ K F + P++V EA+ Q+ V H F+ +++ E ++ +VYKRK+G
Sbjct: 110 LSDEVVETNGEVVKVKRFGVKPMSVEEAVLQMELVGHNFFVYQDSEANKVCVVYKRKDGD 169
Query: 344 YGLIIP 327
YGL+ P
Sbjct: 170 YGLLEP 175
[250][TOP]
>UniRef100_C0GF81 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF81_9FIRM
Length = 177
Score = 58.5 bits (140), Expect = 3e-07
Identities = 28/71 (39%), Positives = 47/71 (66%)
Frame = -3
Query: 539 DDISPLEEEGEATLVEVVRTKYFDMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYK 360
+++ +E+E E +VV+TK F + P+ V EAI Q+ + H F+ F N + ++N++Y+
Sbjct: 106 NELPQVEDEEEDW--DVVKTKRFVVKPMPVEEAILQMNLLGHDFFVFMNADNEDVNVIYR 163
Query: 359 RKEGGYGLIIP 327
RK+G YGLI P
Sbjct: 164 RKDGKYGLIEP 174