[UP]
[1][TOP]
>UniRef100_B9RQE4 DNA repair/transcription protein met18/mms19, putative n=1
Tax=Ricinus communis RepID=B9RQE4_RICCO
Length = 1174
Score = 166 bits (421), Expect = 7e-40
Identities = 83/109 (76%), Positives = 94/109 (86%)
Frame = -1
Query: 523 KDILYGLLLVLSGILTEKNGQEAVTENAHIIINCLIKLVDYPHKTLVRETAVQCLVALSV 344
KDI+YGLLLVLSGILT+ NG+EAV ENAHIII CLI+LV YPH L+RETAVQCLVA+S
Sbjct: 1066 KDIMYGLLLVLSGILTDTNGKEAVIENAHIIIKCLIELVAYPHMMLIRETAVQCLVAMSE 1125
Query: 343 LPHVRIYPMRTQVLRAISKCLDDRKRAVRLEAVKCQQAWASTASTSLRF 197
LPH RIYP+R QVL+AISK LDD KRAVR EAV+C+QAWAS AS SL +
Sbjct: 1126 LPHTRIYPVRIQVLQAISKALDDPKRAVRQEAVRCRQAWASIASRSLHY 1174
[2][TOP]
>UniRef100_A7P731 Chromosome chr9 scaffold_7, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7P731_VITVI
Length = 1139
Score = 157 bits (397), Expect = 4e-37
Identities = 76/99 (76%), Positives = 85/99 (85%)
Frame = -1
Query: 523 KDILYGLLLVLSGILTEKNGQEAVTENAHIIINCLIKLVDYPHKTLVRETAVQCLVALSV 344
KDILY LLLVLSGIL +KNGQE V ENAH+IINCLI LV YPH +VRETA+QCLVA+S
Sbjct: 1038 KDILYNLLLVLSGILMDKNGQETVVENAHVIINCLIGLVGYPHMMVVRETAIQCLVAMSR 1097
Query: 343 LPHVRIYPMRTQVLRAISKCLDDRKRAVRLEAVKCQQAW 227
LPH RIYPMRTQVLR++ K LDD KRAVR EAV+C+QAW
Sbjct: 1098 LPHARIYPMRTQVLRSVQKALDDPKRAVRHEAVRCRQAW 1136
[3][TOP]
>UniRef100_Q0WVF8 Putative uncharacterized protein At5g48120 n=1 Tax=Arabidopsis
thaliana RepID=Q0WVF8_ARATH
Length = 1134
Score = 137 bits (346), Expect = 3e-31
Identities = 67/106 (63%), Positives = 82/106 (77%)
Frame = -1
Query: 523 KDILYGLLLVLSGILTEKNGQEAVTENAHIIINCLIKLVDYPHKTLVRETAVQCLVALSV 344
K+ L+ LLLVLSG LT+ GQ++ ++NAHIII CLIKL YPH +VRET++QCLVAL
Sbjct: 1026 KETLFSLLLVLSGTLTDTKGQQSASDNAHIIIECLIKLTSYPHLMVVRETSIQCLVALLE 1085
Query: 343 LPHVRIYPMRTQVLRAISKCLDDRKRAVRLEAVKCQQAWASTASTS 206
LPH RIYP R +VL+AI K LDD KR VR EA++C+QAWAS S S
Sbjct: 1086 LPHRRIYPFRREVLQAIEKSLDDPKRKVREEAIRCRQAWASITSGS 1131
[4][TOP]
>UniRef100_B8B7P8 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8B7P8_ORYSI
Length = 1166
Score = 127 bits (318), Expect = 6e-28
Identities = 58/99 (58%), Positives = 78/99 (78%)
Frame = -1
Query: 523 KDILYGLLLVLSGILTEKNGQEAVTENAHIIINCLIKLVDYPHKTLVRETAVQCLVALSV 344
KD++Y +LLVLSG+L ++ G+E + EN HII++ L +LV YPH +VRETA+QCLVA+S
Sbjct: 1034 KDLVYSILLVLSGMLMDEKGKECIVENIHIIVSVLTQLVSYPHMMVVRETALQCLVAMSS 1093
Query: 343 LPHVRIYPMRTQVLRAISKCLDDRKRAVRLEAVKCQQAW 227
LPH +IY MR Q+L+A K LDD+KR VR EAV+C+Q W
Sbjct: 1094 LPHSKIYRMRPQILQAAIKALDDKKRRVRQEAVRCRQTW 1132
[5][TOP]
>UniRef100_B9GXE8 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GXE8_POPTR
Length = 93
Score = 122 bits (305), Expect = 2e-26
Identities = 59/81 (72%), Positives = 66/81 (81%)
Frame = -1
Query: 466 GQEAVTENAHIIINCLIKLVDYPHKTLVRETAVQCLVALSVLPHVRIYPMRTQVLRAISK 287
GQE V ENAHIIIN LI V YPH LVRET +QCLVA+S LPH RIYPMR QVL+A+SK
Sbjct: 11 GQEGVIENAHIIINYLIGFVTYPHTMLVRETTIQCLVAMSELPHTRIYPMRIQVLQAVSK 70
Query: 286 CLDDRKRAVRLEAVKCQQAWA 224
LDD KRAVR EAV+C+QAW+
Sbjct: 71 ALDDPKRAVRQEAVRCRQAWS 91
[6][TOP]
>UniRef100_B4FL27 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FL27_MAIZE
Length = 246
Score = 115 bits (288), Expect = 2e-24
Identities = 53/101 (52%), Positives = 74/101 (73%)
Frame = -1
Query: 523 KDILYGLLLVLSGILTEKNGQEAVTENAHIIINCLIKLVDYPHKTLVRETAVQCLVALSV 344
KD++Y LLLV SG+L ++ G+E + +N I I+ L +LV YPH +VRETA+QCLVA S
Sbjct: 144 KDLVYSLLLVFSGMLMDEKGKECILDNIQITISVLTELVSYPHMMVVRETALQCLVAFST 203
Query: 343 LPHVRIYPMRTQVLRAISKCLDDRKRAVRLEAVKCQQAWAS 221
PH +IYP+R +V++A + LDD+KRAVR AV+C+ W S
Sbjct: 204 FPHSKIYPVRRKVVQAAVRALDDKKRAVRRVAVRCRHTWQS 244
[7][TOP]
>UniRef100_B9FVT4 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group
RepID=B9FVT4_ORYSJ
Length = 1158
Score = 95.1 bits (235), Expect = 3e-18
Identities = 46/89 (51%), Positives = 62/89 (69%)
Frame = -1
Query: 523 KDILYGLLLVLSGILTEKNGQEAVTENAHIIINCLIKLVDYPHKTLVRETAVQCLVALSV 344
KD++Y +LLVLSG+L ++ G+E + EN HII++ L +LV YPH +VRETA+QCLVA+S
Sbjct: 1034 KDLVYSILLVLSGMLMDEKGKECIVENIHIIVSVLTQLVSYPHMMVVRETALQCLVAMSS 1093
Query: 343 LPHVRIYPMRTQVLRAISKCLDDRKRAVR 257
LPH +IY MR Q S L R +R
Sbjct: 1094 LPHSKIYRMRPQACSCRSYKLQSRLLMIR 1122
[8][TOP]
>UniRef100_Q9FI26 Genomic DNA, chromosome 5, P1 clone:MDN11 n=1 Tax=Arabidopsis
thaliana RepID=Q9FI26_ARATH
Length = 1152
Score = 93.2 bits (230), Expect = 1e-17
Identities = 54/111 (48%), Positives = 72/111 (64%), Gaps = 5/111 (4%)
Frame = -1
Query: 523 KDILYGLLLVLSGILTEKNGQ-----EAVTENAHIIINCLIKLVDYPHKTLVRETAVQCL 359
K+ L+ LLLVLSG LT+ E + E+++ ++ L + +VRET++QCL
Sbjct: 1045 KETLFSLLLVLSGTLTDTKASSFFPTELILESSNDNMSTLNGM------QVVRETSIQCL 1098
Query: 358 VALSVLPHVRIYPMRTQVLRAISKCLDDRKRAVRLEAVKCQQAWASTASTS 206
VAL LPH RIYP R +VL+AI K LDD KR VR EA++C+QAWAS S S
Sbjct: 1099 VALLELPHRRIYPFRREVLQAIEKSLDDPKRKVREEAIRCRQAWASITSGS 1149
[9][TOP]
>UniRef100_C1EG40 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EG40_9CHLO
Length = 1313
Score = 59.3 bits (142), Expect = 2e-07
Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 17/116 (14%)
Frame = -1
Query: 523 KDILYGLLLVLSGILTEKNGQEAVT----ENAHIIINCLIK------------LVDYPHK 392
KD L G + + + L++ G++ + E+A II L + L P
Sbjct: 1091 KDALAGSITMTAAFLSDPRGRDTLALHAEEHAGAIIGALCRIGSSAARKPPGSLAGSPTL 1150
Query: 391 TLV-RETAVQCLVALSVLPHVRIYPMRTQVLRAISKCLDDRKRAVRLEAVKCQQAW 227
+LV RETA+ LVA + LP +YP R V RA LDD KR VR A +C++AW
Sbjct: 1151 SLVVRETALDALVAATSLPFSVVYPQRRAVERASVAALDDPKRVVRFAAARCREAW 1206
[10][TOP]
>UniRef100_UPI00005A4E80 PREDICTED: similar to MMS19-like (MET18 homolog, S. cerevisiae)
isoform 10 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A4E80
Length = 974
Score = 55.8 bits (133), Expect = 2e-06
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = -1
Query: 433 IINCLIKLVDYPH-KTLVRETAVQCLVALSVLPHVRIYPMRTQVLRAISKCLDDRKRAVR 257
++N L K V P T VR A+QC+ AL+ LP + P + QV+RA++K LDD+KR VR
Sbjct: 897 VLNRLPKPVLLPELPTAVRIAALQCMHALTRLPTTVLLPYKPQVIRALAKPLDDKKRLVR 956
Query: 256 LEAVKCQQAW 227
EAV + W
Sbjct: 957 KEAVSARGEW 966
[11][TOP]
>UniRef100_Q54J88 MMS19 nucleotide excision repair protein homolog n=1
Tax=Dictyostelium discoideum RepID=MMS19_DICDI
Length = 1115
Score = 55.5 bits (132), Expect = 2e-06
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = -1
Query: 433 IINCLIKLVDYPHKTLVRETAVQCLVALSV-LPHVRIYPMRTQVLRAISKCLDDRKRAVR 257
+I LIK+ K ++ +A++ L LS +P V ++P +TQV+ I CLDD+KR VR
Sbjct: 1041 LIPSLIKISTKSTKYNLKRSALEILTLLSKSIPFVNLFPYKTQVVTDIIPCLDDKKRIVR 1100
Query: 256 LEAVKCQQAW 227
EA KC+ +W
Sbjct: 1101 REAQKCRNSW 1110
[12][TOP]
>UniRef100_UPI0000D5729B PREDICTED: similar to DNA repair/transcription protein met18/mms19
n=1 Tax=Tribolium castaneum RepID=UPI0000D5729B
Length = 739
Score = 55.1 bits (131), Expect = 3e-06
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Frame = -1
Query: 520 DILYGLLLVLSGILTEKNGQEAVTENAHIIINCLIKLVDYPHKTLVRETAVQCLVAL-SV 344
+IL +L ++ +T K ++ + EN I + +KL Y VR A+QCL + S
Sbjct: 636 EILIVILRLIRDFITTK--EQVIEENLGIFLARFLKLATYDKSMKVRILALQCLQEVTSK 693
Query: 343 LPHVRIYPMRTQVLRAISKCLDDRKRAVRLEAVKCQQAW 227
P + P + VL+ + + +DD+KR VR EAV+ + W
Sbjct: 694 FPIFMLLPHKNDVLKVLGQVIDDKKRIVRREAVEARSMW 732
[13][TOP]
>UniRef100_UPI0001AE6D6D UPI0001AE6D6D related cluster n=1 Tax=Homo sapiens
RepID=UPI0001AE6D6D
Length = 113
Score = 55.1 bits (131), Expect = 3e-06
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = -1
Query: 433 IINCLIKLVDYPH-KTLVRETAVQCLVALSVLPHVRIYPMRTQVLRAISKCLDDRKRAVR 257
++N L K V P T VR A+QC+ AL+ LP + P + QV+RA++K LDD+KR VR
Sbjct: 36 VLNRLPKPVLLPELPTAVRIAALQCMHALTRLPTPVLLPYKPQVIRALAKPLDDKKRLVR 95
Query: 256 LEAVKCQQAW 227
EAV + W
Sbjct: 96 KEAVSARGEW 105
[14][TOP]
>UniRef100_B0QZ73 MMS19 nucleotide excision repair homolog (S. cerevisiae) (Fragment)
n=2 Tax=Homo sapiens RepID=B0QZ73_HUMAN
Length = 89
Score = 55.1 bits (131), Expect = 3e-06
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = -1
Query: 433 IINCLIKLVDYPH-KTLVRETAVQCLVALSVLPHVRIYPMRTQVLRAISKCLDDRKRAVR 257
++N L K V P T VR A+QC+ AL+ LP + P + QV+RA++K LDD+KR VR
Sbjct: 12 VLNRLPKPVLLPELPTAVRIAALQCMHALTRLPTPVLLPYKPQVIRALAKPLDDKKRLVR 71
Query: 256 LEAVKCQQAW 227
EAV + W
Sbjct: 72 KEAVSARGEW 81
[15][TOP]
>UniRef100_UPI00006A0E02 MMS19-like protein (hMMS19) (MET18 homolog). n=1 Tax=Xenopus
(Silurana) tropicalis RepID=UPI00006A0E02
Length = 988
Score = 54.7 bits (130), Expect = 4e-06
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Frame = -1
Query: 451 TENAHI--IINCLIKLVDYPHKTLVRETAVQCLVALSVLPHVRIYPMRTQVLRAISKCLD 278
T HI +I+ L+ L P VR TA++C++AL+ LP + P + QV+RA++K LD
Sbjct: 913 TLKVHIDGLISKLVSLTLSPAMA-VRITALKCILALTKLPLHMLLPYKQQVIRALAKPLD 971
Query: 277 DRKRAVRLEAVKCQQAW 227
D+KR VR EAV+ + W
Sbjct: 972 DKKRLVRKEAVETRCQW 988
[16][TOP]
>UniRef100_Q0V9L1 MMS19 nucleotide excision repair homolog n=1 Tax=Xenopus (Silurana)
tropicalis RepID=Q0V9L1_XENTR
Length = 1022
Score = 54.7 bits (130), Expect = 4e-06
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Frame = -1
Query: 451 TENAHI--IINCLIKLVDYPHKTLVRETAVQCLVALSVLPHVRIYPMRTQVLRAISKCLD 278
T HI +I+ L+ L P VR TA++C++AL+ LP + P + QV+RA++K LD
Sbjct: 939 TLKVHIDGLISKLVSLTLSPAMA-VRITALKCILALTKLPLHMLLPYKQQVIRALAKPLD 997
Query: 277 DRKRAVRLEAVKCQQAW 227
D+KR VR EAV+ + W
Sbjct: 998 DKKRLVRKEAVETRCQW 1014
[17][TOP]
>UniRef100_C1MX09 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MX09_9CHLO
Length = 1275
Score = 54.7 bits (130), Expect = 4e-06
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = -1
Query: 388 LVRETAVQCLVALSVLPHVRIYPMRTQVLRAISKCLDDRKRAVRLEAVKCQQAW 227
+VRETA++ L+A LP +YP R V++A + LDD KR VR+ A +C++ W
Sbjct: 1213 VVRETALEALLAAVALPFSAVYPQRKAVMKAATAALDDPKRRVRMAAGRCREVW 1266
[18][TOP]
>UniRef100_UPI000180CDA7 PREDICTED: similar to MMS19 nucleotide excision repair homolog n=1
Tax=Ciona intestinalis RepID=UPI000180CDA7
Length = 1026
Score = 54.3 bits (129), Expect = 5e-06
Identities = 27/78 (34%), Positives = 44/78 (56%)
Frame = -1
Query: 460 EAVTENAHIIINCLIKLVDYPHKTLVRETAVQCLVALSVLPHVRIYPMRTQVLRAISKCL 281
EA+T + ++ ++L + VR AVQC+ +++LP + I P + ++R + L
Sbjct: 944 EAMTAHLENLMKHFLRLSKFKQDIDVRVKAVQCIGVVTLLPPIVILPFKNDIVRHLVSVL 1003
Query: 280 DDRKRAVRLEAVKCQQAW 227
DDRKR VR EA K + W
Sbjct: 1004 DDRKRDVRTEASKARSEW 1021
[19][TOP]
>UniRef100_Q6DCF2 Mms19l-prov protein n=1 Tax=Xenopus laevis RepID=Q6DCF2_XENLA
Length = 1022
Score = 53.9 bits (128), Expect = 7e-06
Identities = 26/53 (49%), Positives = 39/53 (73%)
Frame = -1
Query: 385 VRETAVQCLVALSVLPHVRIYPMRTQVLRAISKCLDDRKRAVRLEAVKCQQAW 227
VR TA++C++AL+ LP + P + QV+RA++K LDD+KR VR EAV+ + W
Sbjct: 962 VRITALKCILALTKLPLHMLLPYKQQVIRALAKPLDDKKRLVRKEAVETRCQW 1014
[20][TOP]
>UniRef100_UPI0000E48961 PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48961
Length = 974
Score = 53.5 bits (127), Expect = 9e-06
Identities = 29/93 (31%), Positives = 53/93 (56%)
Frame = -1
Query: 505 LLLVLSGILTEKNGQEAVTENAHIIINCLIKLVDYPHKTLVRETAVQCLVALSVLPHVRI 326
+L +L +L E ++ + A ++ L++L Y VR +++C+ A++ PH +
Sbjct: 875 ILDILESLLEET--LPSLVDQADTLLPTLLELSAYQASMKVRIASLKCVGAITSFPHHLV 932
Query: 325 YPMRTQVLRAISKCLDDRKRAVRLEAVKCQQAW 227
YP + V+R+++ LDD+KR VR EA K + W
Sbjct: 933 YPHQETVVRSLAPRLDDKKRLVRQEAGKARTKW 965