[UP]
[1][TOP] >UniRef100_A2Q217 HMG-I and HMG-Y, DNA-binding; Bromodomain; Helicase, C-terminal (Fragment) n=1 Tax=Medicago truncatula RepID=A2Q217_MEDTR Length = 1069 Score = 217 bits (552), Expect = 4e-55 Identities = 113/167 (67%), Positives = 129/167 (77%) Frame = +2 Query: 2 NLSGSSTRTTKMTEIIQRGCKNVISKLQRRIDKDGQQVVPLLTAFLKRIENSGYTAGSGK 181 NL GSS T MTEIIQR CK+VISKLQRRIDK+G Q+VPLLT KRIENSG+ GSG Sbjct: 758 NLRGSSAHVTNMTEIIQRRCKSVISKLQRRIDKEGHQIVPLLTDLWKRIENSGFAGGSGN 817 Query: 182 TLLDLRKIDQRIDRLEYNGVMELVSDVQFMLRSAMHSYGYSEEVNNEADRVHNLFFDILK 361 LLDLRKIDQRI+RLEY+GVME V DVQFML+SAM YGYS EV EA +VH+LFFDILK Sbjct: 818 NLLDLRKIDQRINRLEYSGVMEFVFDVQFMLKSAMQFYGYSYEVRTEARKVHDLFFDILK 877 Query: 362 IAFPNVDFREARNGLSSPPQVSASAVASPXQVTVGPSKRNRVMNDVE 502 F ++DF EA++ LS Q+SA+A AS Q TV PSKR R ND+E Sbjct: 878 TTFSDIDFGEAKSALSFTSQISANAGASSKQATVFPSKRKRGKNDME 924 [2][TOP] >UniRef100_B9RDU3 Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO Length = 2248 Score = 213 bits (542), Expect = 6e-54 Identities = 108/168 (64%), Positives = 134/168 (79%), Gaps = 1/168 (0%) Frame = +2 Query: 2 NLSGSSTRTTKMTEIIQRGCKNVISKLQRRIDKDGQQVVPLLTAFLKRIENSGYTAGSGK 181 N SGSS +KM+++IQR CKNVISKLQRRIDK+GQ +VP+LT KR+E+SGY +G+G Sbjct: 1928 NASGSSVLGSKMSDVIQRRCKNVISKLQRRIDKEGQHIVPVLTDLWKRMESSGYMSGAGN 1987 Query: 182 TLLDLRKIDQRIDRLEYNGVMELVSDVQFMLRSAMHSYGYSEEVNNEADRVHNLFFDILK 361 LLDLRKI+ R+DRLEYNGVMELV DVQFML+ AM Y +S E +EA +VH+LFFDILK Sbjct: 1988 NLLDLRKIETRVDRLEYNGVMELVVDVQFMLKGAMQFYTFSHEARSEARKVHDLFFDILK 2047 Query: 362 IAFPNVDFREARNGLS-SPPQVSASAVASPXQVTVGPSKRNRVMNDVE 502 IAFP+ DFREARN LS S P ++S+ SP Q VG SKR+R++N+VE Sbjct: 2048 IAFPDTDFREARNALSFSNPLSTSSSAPSPRQAAVGQSKRHRLINEVE 2095 [3][TOP] >UniRef100_B9GQA7 Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GQA7_POPTR Length = 2222 Score = 201 bits (512), Expect = 2e-50 Identities = 105/166 (63%), Positives = 129/166 (77%), Gaps = 1/166 (0%) Frame = +2 Query: 8 SGSSTRTTKMTEIIQRGCKNVISKLQRRIDKDGQQVVPLLTAFLKRIENSGYTAGSGKTL 187 SG+ST KM+++IQR CKNVISK QRRIDK+GQQ+VPLL KRIEN GY +G+G L Sbjct: 1909 SGAST-LGKMSDVIQRRCKNVISKFQRRIDKEGQQIVPLLADLWKRIENPGYISGAGTNL 1967 Query: 188 LDLRKIDQRIDRLEYNGVMELVSDVQFMLRSAMHSYGYSEEVNNEADRVHNLFFDILKIA 367 LDLRKI+QR+DRLEY+GVMELV DVQFML+ AM YG+S EV EA +VH+LFFDILKIA Sbjct: 1968 LDLRKIEQRVDRLEYSGVMELVFDVQFMLKGAMQFYGFSHEVRTEARKVHDLFFDILKIA 2027 Query: 368 FPNVDFREARNGLS-SPPQVSASAVASPXQVTVGPSKRNRVMNDVE 502 FP+ DFREAR+ S S P ++ + SP Q +G KR++ +NDVE Sbjct: 2028 FPDTDFREARDTFSFSGPSSTSISAPSPKQAALGLIKRHKSINDVE 2073 [4][TOP] >UniRef100_UPI0001984CF8 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001984CF8 Length = 2268 Score = 196 bits (499), Expect = 5e-49 Identities = 104/163 (63%), Positives = 124/163 (76%), Gaps = 1/163 (0%) Frame = +2 Query: 17 STRTTKMTEIIQRGCKNVISKLQRRIDKDGQQVVPLLTAFLKRIENSGYTAGSGKTLLDL 196 +T +M EI+QR CKNVISKLQRRIDK+G Q+VPLLT + KR+ENSGY +G G +LDL Sbjct: 1948 NTGGPRMPEIMQRKCKNVISKLQRRIDKEGHQIVPLLTDWWKRVENSGYISGPGNNILDL 2007 Query: 197 RKIDQRIDRLEYNGVMELVSDVQFMLRSAMHSYGYSEEVNNEADRVHNLFFDILKIAFPN 376 RKIDQRIDRLEY GVMELV DVQ ML+++M YG S EV EA +VH LFF+ILKIAFP+ Sbjct: 2008 RKIDQRIDRLEYIGVMELVFDVQQMLKNSMQYYGLSHEVRVEARKVHELFFNILKIAFPD 2067 Query: 377 VDFREARNGLSSPPQVSASAVA-SPXQVTVGPSKRNRVMNDVE 502 DFREARN +S VS A A SP Q VG KR++ +N+VE Sbjct: 2068 TDFREARNAISFSGPVSTPASAPSPRQAAVGQGKRHKPINEVE 2110 [5][TOP] >UniRef100_A7PZI5 Chromosome chr15 scaffold_40, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7PZI5_VITVI Length = 2105 Score = 196 bits (499), Expect = 5e-49 Identities = 104/163 (63%), Positives = 124/163 (76%), Gaps = 1/163 (0%) Frame = +2 Query: 17 STRTTKMTEIIQRGCKNVISKLQRRIDKDGQQVVPLLTAFLKRIENSGYTAGSGKTLLDL 196 +T +M EI+QR CKNVISKLQRRIDK+G Q+VPLLT + KR+ENSGY +G G +LDL Sbjct: 1814 NTGGPRMPEIMQRKCKNVISKLQRRIDKEGHQIVPLLTDWWKRVENSGYISGPGNNILDL 1873 Query: 197 RKIDQRIDRLEYNGVMELVSDVQFMLRSAMHSYGYSEEVNNEADRVHNLFFDILKIAFPN 376 RKIDQRIDRLEY GVMELV DVQ ML+++M YG S EV EA +VH LFF+ILKIAFP+ Sbjct: 1874 RKIDQRIDRLEYIGVMELVFDVQQMLKNSMQYYGLSHEVRVEARKVHELFFNILKIAFPD 1933 Query: 377 VDFREARNGLSSPPQVSASAVA-SPXQVTVGPSKRNRVMNDVE 502 DFREARN +S VS A A SP Q VG KR++ +N+VE Sbjct: 1934 TDFREARNAISFSGPVSTPASAPSPRQAAVGQGKRHKPINEVE 1976 [6][TOP] >UniRef100_A5B1Q9 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5B1Q9_VITVI Length = 2238 Score = 194 bits (492), Expect = 4e-48 Identities = 103/163 (63%), Positives = 123/163 (75%), Gaps = 1/163 (0%) Frame = +2 Query: 17 STRTTKMTEIIQRGCKNVISKLQRRIDKDGQQVVPLLTAFLKRIENSGYTAGSGKTLLDL 196 +T +M EI+QR CKNVISKLQRRIDK+G Q+VPLLT + KR+E SGY +G G +LDL Sbjct: 1918 NTGGPRMPEIMQRKCKNVISKLQRRIDKEGHQIVPLLTDWWKRVEXSGYISGPGNNILDL 1977 Query: 197 RKIDQRIDRLEYNGVMELVSDVQFMLRSAMHSYGYSEEVNNEADRVHNLFFDILKIAFPN 376 RKIDQRIDRLEY GVMELV DVQ ML+++M YG S EV EA +VH LFF+ILKIAFP+ Sbjct: 1978 RKIDQRIDRLEYIGVMELVFDVQQMLKNSMQYYGLSHEVRVEARKVHELFFNILKIAFPD 2037 Query: 377 VDFREARNGLSSPPQVSASAVA-SPXQVTVGPSKRNRVMNDVE 502 DFREARN +S VS A A SP Q VG KR++ +N+VE Sbjct: 2038 TDFREARNAISFSGPVSTPASAPSPRQAAVGQGKRHKPINEVE 2080 [7][TOP] >UniRef100_Q6EVK6-2 Isoform 2 of ATP-dependent helicase BRM n=1 Tax=Arabidopsis thaliana RepID=Q6EVK6-2 Length = 2192 Score = 176 bits (446), Expect = 8e-43 Identities = 92/164 (56%), Positives = 118/164 (71%), Gaps = 1/164 (0%) Frame = +2 Query: 14 SSTRTTKMTEIIQRGCKNVISKLQRRIDKDGQQVVPLLTAFLKRIENSGYTAGSGKTLLD 193 SS +M+ IIQ+ CK VISKLQRRIDK+GQQ+VP+LT KRI+N GY AG LL+ Sbjct: 1888 SSNAGARMSHIIQKRCKIVISKLQRRIDKEGQQIVPMLTNLWKRIQN-GYAAGGVNNLLE 1946 Query: 194 LRKIDQRIDRLEYNGVMELVSDVQFMLRSAMHSYGYSEEVNNEADRVHNLFFDILKIAFP 373 LR+ID R++RLEY GVMEL SDVQ MLR AM YG+S EV +EA +VHNLFFD+LK++FP Sbjct: 1947 LREIDHRVERLEYAGVMELASDVQLMLRGAMQFYGFSHEVRSEAKKVHNLFFDLLKMSFP 2006 Query: 374 NVDFREARNGLS-SPPQVSASAVASPXQVTVGPSKRNRVMNDVE 502 + DFREARN LS S + + +P + KR +++N+ E Sbjct: 2007 DTDFREARNALSFSGSAPTLVSTPTPRGAGISQGKRQKLVNEPE 2050 [8][TOP] >UniRef100_Q6EVK6 ATP-dependent helicase BRM n=1 Tax=Arabidopsis thaliana RepID=BRM_ARATH Length = 2193 Score = 176 bits (446), Expect = 8e-43 Identities = 92/164 (56%), Positives = 118/164 (71%), Gaps = 1/164 (0%) Frame = +2 Query: 14 SSTRTTKMTEIIQRGCKNVISKLQRRIDKDGQQVVPLLTAFLKRIENSGYTAGSGKTLLD 193 SS +M+ IIQ+ CK VISKLQRRIDK+GQQ+VP+LT KRI+N GY AG LL+ Sbjct: 1889 SSNAGARMSHIIQKRCKIVISKLQRRIDKEGQQIVPMLTNLWKRIQN-GYAAGGVNNLLE 1947 Query: 194 LRKIDQRIDRLEYNGVMELVSDVQFMLRSAMHSYGYSEEVNNEADRVHNLFFDILKIAFP 373 LR+ID R++RLEY GVMEL SDVQ MLR AM YG+S EV +EA +VHNLFFD+LK++FP Sbjct: 1948 LREIDHRVERLEYAGVMELASDVQLMLRGAMQFYGFSHEVRSEAKKVHNLFFDLLKMSFP 2007 Query: 374 NVDFREARNGLS-SPPQVSASAVASPXQVTVGPSKRNRVMNDVE 502 + DFREARN LS S + + +P + KR +++N+ E Sbjct: 2008 DTDFREARNALSFSGSAPTLVSTPTPRGAGISQGKRQKLVNEPE 2051 [9][TOP] >UniRef100_C5XS82 Putative uncharacterized protein Sb04g001010 n=1 Tax=Sorghum bicolor RepID=C5XS82_SORBI Length = 2166 Score = 144 bits (363), Expect = 3e-33 Identities = 74/162 (45%), Positives = 109/162 (67%), Gaps = 2/162 (1%) Frame = +2 Query: 23 RTTKMTEIIQRGCKNVISKLQRRIDKDGQQVVPLLTAFLKRIENSGYTAGSGKTLLDLRK 202 R TKM++ +QR CKNVISKL RRIDK+G Q++P ++++ +R ENS + +G TL DL+K Sbjct: 1852 RGTKMSDSMQRKCKNVISKLWRRIDKEGHQIIPNISSWWRRNENSSFRGPAGSTL-DLQK 1910 Query: 203 IDQRIDRLEYNGVMELVSDVQFMLRSAMHSYGYSEEVNNEADRVHNLFFDILKIAFPNVD 382 I+QR+D EY V E ++D+Q ML+S + + Y EV EA+ +HNLFF+I+KIAFP+ D Sbjct: 1911 IEQRVDGFEYGAVTEFIADMQQMLKSVVQHFSYRHEVRIEAETLHNLFFNIMKIAFPDSD 1970 Query: 383 FREARNGL--SSPPQVSASAVASPXQVTVGPSKRNRVMNDVE 502 F EA+N + S+P ++ A A + T KR ++ E Sbjct: 1971 FSEAKNAMSFSNPGGAASGAAAQSSKHTASVHKRRASASEAE 2012 [10][TOP] >UniRef100_B4FVH8 Putative uncharacterized protein n=1 Tax=Zea mays RepID=B4FVH8_MAIZE Length = 377 Score = 143 bits (361), Expect = 5e-33 Identities = 75/153 (49%), Positives = 107/153 (69%), Gaps = 1/153 (0%) Frame = +2 Query: 29 TKMTEIIQRGCKNVISKLQRRIDKDGQQVVPLLTAFLKRIENSGYTAGSGKTLLDLRKID 208 TKM++ +QR CKNVISKL RRIDK+G Q++P ++++ +R ENS + +G TL DL+KI+ Sbjct: 48 TKMSDSMQRKCKNVISKLWRRIDKEGHQMIPNISSWWRRNENSSFRGPAGSTL-DLQKIE 106 Query: 209 QRIDRLEYNGVMELVSDVQFMLRSAMHSYGYSEEVNNEADRVHNLFFDILKIAFPNVDFR 388 QR+D LEY V E ++D+Q ML+S + + Y EV EA+ +HNLFF+I+KIAFP+ DF Sbjct: 107 QRVDGLEYGAVTEFIADMQQMLKSVVQHFSYRHEVRIEAETLHNLFFNIMKIAFPDSDFM 166 Query: 389 EARNGLS-SPPQVSASAVASPXQVTVGPSKRNR 484 EA+N +S S P A+A S + KR+R Sbjct: 167 EAKNAMSFSNPGSGAAAAPSSSKHAAPSLKRSR 199 [11][TOP] >UniRef100_Q6Z7C5 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6Z7C5_ORYSJ Length = 2200 Score = 142 bits (357), Expect = 2e-32 Identities = 75/161 (46%), Positives = 110/161 (68%), Gaps = 3/161 (1%) Frame = +2 Query: 8 SGSSTRTTKMTEIIQRGCKNVISKLQRRIDKDGQQVVPLLTAFLKRIENSGYTAGSGKTL 187 +G ++ TKM++ +QR CKNVI+KL RRIDK+G Q++P ++++ +R ENS + G + Sbjct: 1876 AGPNSSGTKMSDSMQRKCKNVINKLWRRIDKEGHQIIPNISSWWRRNENSSFK-GLASST 1934 Query: 188 LDLRKIDQRIDRLEYNGVMELVSDVQFMLRSAMHSYGYSEEVNNEADRVHNLFFDILKIA 367 LDL+KI+QR+D EY GV E ++D+Q ML+S + + Y EV EA+ +HNLFF+I+KIA Sbjct: 1935 LDLQKIEQRVDGFEYGGVNEFIADMQQMLKSVVQHFSYRHEVRVEAETLHNLFFNIMKIA 1994 Query: 368 FPNVDFREARNGLS-SPP--QVSASAVASPXQVTVGPSKRN 481 FP+ DFREA+ +S S P S SA S Q G +R+ Sbjct: 1995 FPDSDFREAKGAMSFSNPGGGASGSAAQSTKQSASGQKRRS 2035 [12][TOP] >UniRef100_B8AGH3 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=B8AGH3_ORYSI Length = 2184 Score = 142 bits (357), Expect = 2e-32 Identities = 75/161 (46%), Positives = 110/161 (68%), Gaps = 3/161 (1%) Frame = +2 Query: 8 SGSSTRTTKMTEIIQRGCKNVISKLQRRIDKDGQQVVPLLTAFLKRIENSGYTAGSGKTL 187 +G ++ TKM++ +QR CKNVI+KL RRIDK+G Q++P ++++ +R ENS + G + Sbjct: 1860 AGPNSSGTKMSDSMQRKCKNVINKLWRRIDKEGHQIIPNISSWWRRNENSSFK-GLASST 1918 Query: 188 LDLRKIDQRIDRLEYNGVMELVSDVQFMLRSAMHSYGYSEEVNNEADRVHNLFFDILKIA 367 LDL+KI+QR+D EY GV E ++D+Q ML+S + + Y EV EA+ +HNLFF+I+KIA Sbjct: 1919 LDLQKIEQRVDGFEYGGVNEFIADMQQMLKSVVQHFSYRHEVRVEAETLHNLFFNIMKIA 1978 Query: 368 FPNVDFREARNGLS-SPP--QVSASAVASPXQVTVGPSKRN 481 FP+ DFREA+ +S S P S SA S Q G +R+ Sbjct: 1979 FPDSDFREAKGAMSFSNPGGGASGSAAQSTKQSASGQKRRS 2019 [13][TOP] >UniRef100_Q0E4K9 Os02g0114000 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q0E4K9_ORYSJ Length = 320 Score = 140 bits (352), Expect = 6e-32 Identities = 74/154 (48%), Positives = 106/154 (68%), Gaps = 3/154 (1%) Frame = +2 Query: 29 TKMTEIIQRGCKNVISKLQRRIDKDGQQVVPLLTAFLKRIENSGYTAGSGKTLLDLRKID 208 TKM++ +QR CKNVI+KL RRIDK+G Q++P ++++ +R ENS + G + LDL+KI+ Sbjct: 3 TKMSDSMQRKCKNVINKLWRRIDKEGHQIIPNISSWWRRNENSSFK-GLASSTLDLQKIE 61 Query: 209 QRIDRLEYNGVMELVSDVQFMLRSAMHSYGYSEEVNNEADRVHNLFFDILKIAFPNVDFR 388 QR+D EY GV E ++D+Q ML+S + + Y EV EA+ +HNLFF+I+KIAFP+ DFR Sbjct: 62 QRVDGFEYGGVNEFIADMQQMLKSVVQHFSYRHEVRVEAETLHNLFFNIMKIAFPDSDFR 121 Query: 389 EARNGLS-SPP--QVSASAVASPXQVTVGPSKRN 481 EA+ +S S P S SA S Q G +R+ Sbjct: 122 EAKGAMSFSNPGGGASGSAAQSTKQSASGQKRRS 155 [14][TOP] >UniRef100_A9RSB9 SWI/SNF class chromatin remodeling complex protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSB9_PHYPA Length = 2486 Score = 83.6 bits (205), Expect = 7e-15 Identities = 52/152 (34%), Positives = 78/152 (51%), Gaps = 6/152 (3%) Frame = +2 Query: 32 KMTEIIQRGCKNVISKLQRRIDKDGQQVVPLLTAFLKRIENSGYTAGSGKTLLDLRKIDQ 211 ++ E Q+ CK+V+SKL ++KDG+Q+ L KR E Y + + + I++ Sbjct: 2145 RLPEGQQKKCKSVLSKLHGAVNKDGRQIAALFLELPKRSELPEYYKVIARPI-NAHLIEE 2203 Query: 212 RIDRLEYNGVMELVSDVQFMLRSAMHSYGYSEEVNNEADRVHNLFFDILKIAFPNVDFRE 391 ++DRLEY V+E SDV M+ +A Y S EV +A R+ LF + + FP VDF Sbjct: 2204 KLDRLEYPSVLEFASDVHLMIDNAARYYSTSAEVQTDARRLQALFDSRMSLIFPEVDFSS 2263 Query: 392 ARNGLSSP------PQVSASAVASPXQVTVGP 469 AR ++P P V+ S V GP Sbjct: 2264 ARVRSNAPVLTPQAPPVTGSRGILQAPVVTGP 2295 [15][TOP] >UniRef100_B7FN88 Putative uncharacterized protein n=1 Tax=Medicago truncatula RepID=B7FN88_MEDTR Length = 218 Score = 83.2 bits (204), Expect = 9e-15 Identities = 42/74 (56%), Positives = 56/74 (75%), Gaps = 1/74 (1%) Frame = +2 Query: 284 MHSYGYSEEVNNEADRVHNLFFDILKIAFPNVDFREARNGLSSPPQVSA-SAVASPXQVT 460 M YG+S EV EA +VHNLFFDILKIAFP+ DF++A++ LS +SA + V+SP QV Sbjct: 1 MQYYGFSLEVRTEARKVHNLFFDILKIAFPDTDFQDAKSALSFTGPISAPTMVSSPRQVA 60 Query: 461 VGPSKRNRVMNDVE 502 VG KR+R++N+VE Sbjct: 61 VGQGKRHRLVNEVE 74 [16][TOP] >UniRef100_A9T357 SWI/SNF class chromatin remodeling complex protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T357_PHYPA Length = 2529 Score = 81.3 bits (199), Expect = 3e-14 Identities = 50/156 (32%), Positives = 82/156 (52%), Gaps = 4/156 (2%) Frame = +2 Query: 32 KMTEIIQRGCKNVISKLQRRIDKDGQQVVPLLTAFLKRIENSGYTAGSGKTLLDLRKIDQ 211 ++ E Q+ CK+V+SKL ++KDG+Q+ L KR E Y + + + I++ Sbjct: 2174 RLPEGQQKKCKSVLSKLHGAVNKDGRQIAALFLELPKRSELPEYYKVIARPI-NSHSIEE 2232 Query: 212 RIDRLEYNGVMELVSDVQFMLRSAMHSYGYSEEVNNEADRVHNLFFDILKIAFPNVDFRE 391 ++DR+EY V+E SDV M+ ++ Y S EV +A R+ LF + + FP VDF Sbjct: 2233 KLDRMEYPSVLEFASDVHLMIDNSARYYSTSAEVQTDARRLQALFESRMSLMFPEVDFSS 2292 Query: 392 ARNGLSSPPQVSAS----AVASPXQVTVGPSKRNRV 487 AR +P Q S + + S Q +V R+++ Sbjct: 2293 ARVRSYAPVQPSQAPPVIGLRSIPQASVVSGPRSKI 2328 [17][TOP] >UniRef100_B4FUE8 Putative uncharacterized protein n=1 Tax=Zea mays RepID=B4FUE8_MAIZE Length = 117 Score = 58.5 bits (140), Expect = 2e-07 Identities = 26/50 (52%), Positives = 37/50 (74%) Frame = +2 Query: 260 VQFMLRSAMHSYGYSEEVNNEADRVHNLFFDILKIAFPNVDFREARNGLS 409 +Q ML+S + + Y EV EA+ +HNLFF+I+KIAFP+ DF EA+N +S Sbjct: 1 MQQMLKSVVQHFSYRHEVRIEAETLHNLFFNIMKIAFPDSDFMEAKNAMS 50