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[1][TOP]
>UniRef100_UPI0001984E27 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984E27
Length = 1971
Score = 340 bits (873), Expect = 4e-92
Identities = 163/191 (85%), Positives = 173/191 (90%)
Frame = +1
Query: 22 PEFIMERHEKPDGPTEYSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGA 201
PEFIMERHEKP GPTEYSCKLQLPCNAPFE LEGP+CSSMRLAQQAVCLAACKKLHEMGA
Sbjct: 928 PEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGA 987
Query: 202 FTDMLLPDKGSGGEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSS 381
FTDMLLPDKGSG E EK +QNDEGDPLPGTARHREFYPEGVA++L+GEWIL GKD C SS
Sbjct: 988 FTDMLLPDKGSGEEGEKVDQNDEGDPLPGTARHREFYPEGVANVLQGEWILLGKDGCNSS 1047
Query: 382 KSLHLFMYVVKCENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASL 561
+ +HL+MY VKC N G SKDPFLTQVSDF VLFGNELDAEVLS+SMDLFIART+ TKASL
Sbjct: 1048 RLVHLYMYAVKCVNFGSSKDPFLTQVSDFVVLFGNELDAEVLSISMDLFIARTMVTKASL 1107
Query: 562 VFGGSISITES 594
VF G I ITES
Sbjct: 1108 VFWGPIDITES 1118
[2][TOP]
>UniRef100_Q2HTA7 Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Ribonuclease
III, bacterial n=1 Tax=Medicago truncatula
RepID=Q2HTA7_MEDTR
Length = 1939
Score = 335 bits (859), Expect = 2e-90
Identities = 165/191 (86%), Positives = 174/191 (91%)
Frame = +1
Query: 22 PEFIMERHEKPDGPTEYSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGA 201
PEFIME+HE GPTEYSC+LQLPCNAPFE LEGPICSS+RLAQQA +AC+KLHEMGA
Sbjct: 837 PEFIMEKHENSGGPTEYSCRLQLPCNAPFENLEGPICSSIRLAQQA---SACRKLHEMGA 893
Query: 202 FTDMLLPDKGSGGEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSS 381
FTDMLLPDKGSG EKEKAEQNDEGD LPGTARHREFYPEGVADILKGEWILSGKDAC +S
Sbjct: 894 FTDMLLPDKGSGEEKEKAEQNDEGDALPGTARHREFYPEGVADILKGEWILSGKDACNNS 953
Query: 382 KSLHLFMYVVKCENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASL 561
K LHL+MY +KCEN+G SKDPFLTQVSDFAVLFG ELDAEVLSMSMDLFIARTVTTKASL
Sbjct: 954 KLLHLYMYTIKCENVGHSKDPFLTQVSDFAVLFGTELDAEVLSMSMDLFIARTVTTKASL 1013
Query: 562 VFGGSISITES 594
VF SI ITES
Sbjct: 1014 VFRESIDITES 1024
[3][TOP]
>UniRef100_B9RMV8 Dicer-1, putative n=1 Tax=Ricinus communis RepID=B9RMV8_RICCO
Length = 1543
Score = 325 bits (832), Expect = 2e-87
Identities = 159/192 (82%), Positives = 172/192 (89%), Gaps = 1/192 (0%)
Frame = +1
Query: 22 PEFIMERHEKPDGPTEYSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGA 201
PEFIMERHEKP GPTEYSCKLQLP N PFE LEGP+CSSMRLAQQAVCLAACKKLHEMGA
Sbjct: 497 PEFIMERHEKPGGPTEYSCKLQLPSNVPFEKLEGPLCSSMRLAQQAVCLAACKKLHEMGA 556
Query: 202 FTDMLLPDKGSGGEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDAC-KS 378
FTDMLLPDKGSG E+E+ +QNDEG+PLPGTARHREFYPEGVA+IL+GEWIL G+D S
Sbjct: 557 FTDMLLPDKGSGEEREQVDQNDEGEPLPGTARHREFYPEGVANILQGEWILCGRDGWNNS 616
Query: 379 SKSLHLFMYVVKCENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKAS 558
+K LHL+MY VKC N G SKDPFLTQVS+FAVLFGNELDAEVLSMSMDLFIART+ TKAS
Sbjct: 617 NKLLHLYMYAVKCVNSGASKDPFLTQVSEFAVLFGNELDAEVLSMSMDLFIARTIITKAS 676
Query: 559 LVFGGSISITES 594
LVF G I ITE+
Sbjct: 677 LVFRGPIDITEN 688
[4][TOP]
>UniRef100_Q9SP32 Endoribonuclease Dicer homolog n=1 Tax=Arabidopsis thaliana
RepID=DICER_ARATH
Length = 1909
Score = 320 bits (821), Expect = 4e-86
Identities = 148/191 (77%), Positives = 172/191 (90%)
Frame = +1
Query: 22 PEFIMERHEKPDGPTEYSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGA 201
PEF ME+HEKP G TEYSC+LQLPCNAPFE LEGP+CSSMRLAQQAVCLAACKKLHEMGA
Sbjct: 861 PEFSMEKHEKPGGHTEYSCRLQLPCNAPFEILEGPVCSSMRLAQQAVCLAACKKLHEMGA 920
Query: 202 FTDMLLPDKGSGGEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSS 381
FTDMLLPDKGSG + EKA+Q+DEG+P+PGTARHREFYPEGVAD+LKGEW+ SGK+ C+SS
Sbjct: 921 FTDMLLPDKGSGQDAEKADQDDEGEPVPGTARHREFYPEGVADVLKGEWVSSGKEVCESS 980
Query: 382 KSLHLFMYVVKCENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASL 561
K HL+MY V+C + G SKDPFL++VS+FA+LFGNELDAEVLSMSMDL++AR + TKASL
Sbjct: 981 KLFHLYMYNVRCVDFGSSKDPFLSEVSEFAILFGNELDAEVLSMSMDLYVARAMITKASL 1040
Query: 562 VFGGSISITES 594
F GS+ ITE+
Sbjct: 1041 AFKGSLDITEN 1051
[5][TOP]
>UniRef100_A7PXV4 Chromosome chr15 scaffold_37, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PXV4_VITVI
Length = 1961
Score = 314 bits (804), Expect = 4e-84
Identities = 154/191 (80%), Positives = 163/191 (85%)
Frame = +1
Query: 22 PEFIMERHEKPDGPTEYSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGA 201
PEFIMERHEKP GPTEYSCKLQLPCNAPFE LEGP AVCLAACKKLHEMGA
Sbjct: 928 PEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGP----------AVCLAACKKLHEMGA 977
Query: 202 FTDMLLPDKGSGGEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSS 381
FTDMLLPDKGSG E EK +QNDEGDPLPGTARHREFYPEGVA++L+GEWIL GKD C SS
Sbjct: 978 FTDMLLPDKGSGEEGEKVDQNDEGDPLPGTARHREFYPEGVANVLQGEWILLGKDGCNSS 1037
Query: 382 KSLHLFMYVVKCENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASL 561
+ +HL+MY VKC N G SKDPFLTQVSDF VLFGNELDAEVLS+SMDLFIART+ TKASL
Sbjct: 1038 RLVHLYMYAVKCVNFGSSKDPFLTQVSDFVVLFGNELDAEVLSISMDLFIARTMVTKASL 1097
Query: 562 VFGGSISITES 594
VF G I ITES
Sbjct: 1098 VFWGPIDITES 1108
[6][TOP]
>UniRef100_Q8LMR2 Endoribonuclease Dicer homolog 1 n=1 Tax=Oryza sativa Japonica Group
RepID=DCL1_ORYSJ
Length = 1883
Score = 309 bits (791), Expect = 1e-82
Identities = 148/191 (77%), Positives = 170/191 (89%)
Frame = +1
Query: 22 PEFIMERHEKPDGPTEYSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGA 201
PEFIM+++EKP G EYSCKLQLPCNAPFE LEGPICSS+RLAQQAVCLAACKKLHEMGA
Sbjct: 838 PEFIMQKYEKPGGSVEYSCKLQLPCNAPFEKLEGPICSSIRLAQQAVCLAACKKLHEMGA 897
Query: 202 FTDMLLPDKGSGGEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSS 381
FTD LLPD+GSG E EK EQNDEG+PLPGTARHREFYPEGVADIL+GEWILSG+D ++S
Sbjct: 898 FTDTLLPDRGSG-EGEKTEQNDEGEPLPGTARHREFYPEGVADILRGEWILSGRDGYQNS 956
Query: 382 KSLHLFMYVVKCENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASL 561
+ + L+MY V C N+G SKDPF+TQ+S+FA++FGNELDAEVLS +MDLF+ART+ TKASL
Sbjct: 957 QFIKLYMYSVNCVNVGTSKDPFVTQLSNFAIIFGNELDAEVLSTTMDLFVARTMITKASL 1016
Query: 562 VFGGSISITES 594
VF G I ITES
Sbjct: 1017 VFRGRIEITES 1027
[7][TOP]
>UniRef100_A2XBW0 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2XBW0_ORYSI
Length = 1883
Score = 306 bits (783), Expect = 1e-81
Identities = 147/191 (76%), Positives = 169/191 (88%)
Frame = +1
Query: 22 PEFIMERHEKPDGPTEYSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGA 201
PEFIM+++EKP G EYSCKLQLPCNAPFE LEGPICSS+RLAQQAVCLAACKKLHEMGA
Sbjct: 838 PEFIMQKYEKPGGSVEYSCKLQLPCNAPFEKLEGPICSSIRLAQQAVCLAACKKLHEMGA 897
Query: 202 FTDMLLPDKGSGGEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSS 381
FTD LLPD+GSG E EK EQNDEG+PLPGTARHREFYPEGVADIL+GEWILSG+D ++S
Sbjct: 898 FTDTLLPDRGSG-EGEKTEQNDEGEPLPGTARHREFYPEGVADILRGEWILSGRDGYQNS 956
Query: 382 KSLHLFMYVVKCENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASL 561
+ + L+MY V C N+G SKD F+TQ+S+FA++FGNELDAEVLS +MDLF+ART+ TKASL
Sbjct: 957 QFIKLYMYSVNCVNVGTSKDSFVTQLSNFAIIFGNELDAEVLSTTMDLFVARTMITKASL 1016
Query: 562 VFGGSISITES 594
VF G I ITES
Sbjct: 1017 VFRGRIEITES 1027
[8][TOP]
>UniRef100_B9GRS6 Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9GRS6_POPTR
Length = 1817
Score = 301 bits (770), Expect = 3e-80
Identities = 149/191 (78%), Positives = 161/191 (84%)
Frame = +1
Query: 22 PEFIMERHEKPDGPTEYSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGA 201
P FIME+HEKP GPTEYSCKLQLPCNAPFE LEGP AVCLAACKKLHEMGA
Sbjct: 826 PGFIMEKHEKPGGPTEYSCKLQLPCNAPFEELEGP----------AVCLAACKKLHEMGA 875
Query: 202 FTDMLLPDKGSGGEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSS 381
FTDMLLPDKGS EK+K +QNDEG+PLPGTARHREFYPEGVA L+GEWIL G+D C +S
Sbjct: 876 FTDMLLPDKGSEEEKDKVDQNDEGEPLPGTARHREFYPEGVAKTLQGEWILCGRDGCNNS 935
Query: 382 KSLHLFMYVVKCENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASL 561
K LHL++Y V+C NIG S DPFLTQVS+FAVLFGNELDAEVLSMSMDLFIART+ TKASL
Sbjct: 936 KVLHLYLYGVRCLNIGTSNDPFLTQVSNFAVLFGNELDAEVLSMSMDLFIARTMITKASL 995
Query: 562 VFGGSISITES 594
VF G I ITES
Sbjct: 996 VFRGRIPITES 1006
[9][TOP]
>UniRef100_A9RV91 DsRNA-specific nuclease dicer and related ribonuclease n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9RV91_PHYPA
Length = 1662
Score = 249 bits (637), Expect = 9e-65
Identities = 117/190 (61%), Positives = 150/190 (78%), Gaps = 1/190 (0%)
Frame = +1
Query: 22 PEFIMERHEKPDGPTEYSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGA 201
PEFIM + E G YSCKLQLPCNAP E ++GP C+S+R AQQ+VCL ACK+LHEMGA
Sbjct: 605 PEFIMNKIESQGGAVRYSCKLQLPCNAPLENVDGPECNSLRGAQQSVCLEACKRLHEMGA 664
Query: 202 FTDMLLPDKGSGGEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDA-CKS 378
FTDMLLPDKGSG E K E ++EG+PLPGT+RHRE+YPEG+ADILKG+WIL+ KD K
Sbjct: 665 FTDMLLPDKGSGEEAAKVEGSEEGEPLPGTSRHREYYPEGIADILKGDWILADKDPDAKP 724
Query: 379 SKSLHLFMYVVKCENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKAS 558
++ +++Y+VKCEN+G SKD LT+ SDF +L G +L EVL M+MDLF+ART+ T+AS
Sbjct: 725 GSNVLVYVYMVKCENVGFSKDNLLTETSDFVILVGQKLQDEVLDMTMDLFVARTMITRAS 784
Query: 559 LVFGGSISIT 588
L F G++ ++
Sbjct: 785 LEFCGNLDLS 794
[10][TOP]
>UniRef100_B3SRP9 Dicer-like 1 n=1 Tax=Physcomitrella patens RepID=B3SRP9_PHYPA
Length = 1662
Score = 248 bits (634), Expect = 2e-64
Identities = 116/190 (61%), Positives = 150/190 (78%), Gaps = 1/190 (0%)
Frame = +1
Query: 22 PEFIMERHEKPDGPTEYSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGA 201
PEFIM + E G YSCKLQLPCNAP E ++GP C+S+R AQQ+VCL ACK+LHEMGA
Sbjct: 605 PEFIMNKIESQGGAVRYSCKLQLPCNAPLENVDGPECNSLRGAQQSVCLEACKRLHEMGA 664
Query: 202 FTDMLLPDKGSGGEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDA-CKS 378
FTDMLLPDKGSG E K E ++EG+PLPGT+RHRE+YPEG+ADILKG+WIL+ KD K
Sbjct: 665 FTDMLLPDKGSGEEAAKVEGSEEGEPLPGTSRHREYYPEGIADILKGDWILADKDPDAKP 724
Query: 379 SKSLHLFMYVVKCENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKAS 558
++ +++Y+VKCEN+G SKD LT+ SDF +L G +L +VL M+MDLF+ART+ T+AS
Sbjct: 725 GSNVLVYVYMVKCENVGFSKDNLLTETSDFVILVGQKLQDQVLDMTMDLFVARTMITRAS 784
Query: 559 LVFGGSISIT 588
L F G++ ++
Sbjct: 785 LEFCGNLDLS 794
[11][TOP]
>UniRef100_A7IYQ4 Dicer-like 1b protein n=1 Tax=Physcomitrella patens
RepID=A7IYQ4_PHYPA
Length = 1695
Score = 200 bits (508), Expect = 8e-50
Identities = 97/172 (56%), Positives = 129/172 (75%), Gaps = 1/172 (0%)
Frame = +1
Query: 22 PEFIMERHEKPDGPTEYSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGA 201
PEFIM + E G YSC+LQLPC+APFE +EGP C+SMR AQQ+ L +K+HEMGA
Sbjct: 635 PEFIMNKIEDQRGAIRYSCRLQLPCHAPFEAVEGPECNSMRGAQQSCVLEGLQKMHEMGA 694
Query: 202 FTDMLLPDKGSGGEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDA-CKS 378
FTDMLL +KGS E K E ++EG+ LPGT+RHRE+YPEG+ADILKG+ I++ KD+ K
Sbjct: 695 FTDMLLSNKGSREEAAKLEGSEEGESLPGTSRHREYYPEGIADILKGDRIVAEKDSDTKE 754
Query: 379 SKSLHLFMYVVKCENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIA 534
+ +FMY VKCEN+G S+D LT+ SDF +L G +L +VL+M+++LF+A
Sbjct: 755 GSKVLVFMYTVKCENVGFSRDSLLTETSDFTLLVGQQLHDQVLTMTINLFVA 806
[12][TOP]
>UniRef100_A9S9V6 DsRNA-specific nuclease dicer and related ribonuclease n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9S9V6_PHYPA
Length = 961
Score = 149 bits (375), Expect = 2e-34
Identities = 85/190 (44%), Positives = 121/190 (63%), Gaps = 1/190 (0%)
Frame = +1
Query: 22 PEFIMERHEKPDGPTEYSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGA 201
PEFIM + E G YSC+LQLPCNAPFE +EGP + L +K+HEMGA
Sbjct: 151 PEFIMNKIEDQRGAIRYSCRLQLPCNAPFEAVEGP---------EFCVLEGLQKMHEMGA 201
Query: 202 FTDMLLPDKGSGGEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDA-CKS 378
FTDMLL +KGS E K E ++EG+ LPGT+RHRE+YPEG+ADILKG+ I++ KD+ K
Sbjct: 202 FTDMLLSNKGSREEAAKLEGSEEGESLPGTSRHREYYPEGIADILKGDRIVAEKDSDTKE 261
Query: 379 SKSLHLFMYVVKCENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKAS 558
+ L + + +D L + F +++VL+M+++LF+ART+TT+AS
Sbjct: 262 GSKISLPNPTLLITMSWKKRD--LDAIRRFRKRHCCS-NSQVLTMTINLFVARTMTTRAS 318
Query: 559 LVFGGSISIT 588
L F G ++++
Sbjct: 319 LKFFGDLNLS 328
[13][TOP]
>UniRef100_B2CU70 DCL1 (Fragment) n=1 Tax=Arabidopsis thaliana RepID=B2CU70_ARATH
Length = 96
Score = 114 bits (286), Expect = 4e-24
Identities = 53/79 (67%), Positives = 67/79 (84%)
Frame = +1
Query: 358 GKDACKSSKSLHLFMYVVKCENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIAR 537
GK+ C+SSK HL+MY V+C + G SKDPFL++VS+FA+LFGNELDAEVLSMSMDL++AR
Sbjct: 1 GKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEVSEFAILFGNELDAEVLSMSMDLYVAR 60
Query: 538 TVTTKASLVFGGSISITES 594
+ TKASL F GS+ ITE+
Sbjct: 61 AMITKASLAFKGSLDITEN 79
[14][TOP]
>UniRef100_B9RQZ1 Ribonuclease III, putative n=1 Tax=Ricinus communis
RepID=B9RQZ1_RICCO
Length = 1660
Score = 85.9 bits (211), Expect = 2e-15
Identities = 50/172 (29%), Positives = 86/172 (50%)
Frame = +1
Query: 70 YSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEKE 249
+ CK+ LP +A F+ + GP+C S +LA+Q CL ACK+LH+MGA D LLP E +
Sbjct: 633 FQCKMMLPASAAFQTIVGPVCRSQQLAKQLACLEACKQLHQMGALDDHLLPSVEEPTEDD 692
Query: 250 KAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSSKSLHLFMYVVKCENIG 429
+ GT + +E + L G W G++ + H + + C +
Sbjct: 693 HTVRRKGSLAGAGTTKRKELHGTTPIHALSGSW---GENL--DGATFHAYKFEFSCSIVS 747
Query: 430 QSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASLVFGGSISI 585
+ + S + +L ++LD +V ++ +DLF+ R T +AS+ G + +
Sbjct: 748 E-------KYSGYILLIESKLDDDVGNIELDLFLVRK-TVRASVSSCGQVHL 791
[15][TOP]
>UniRef100_B9IKF4 Dicer-like protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9IKF4_POPTR
Length = 1492
Score = 75.5 bits (184), Expect = 3e-12
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 2/168 (1%)
Frame = +1
Query: 88 LPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGE--KEKAEQ 261
LP NA F+ L GP C + +LA+Q VCL ACKKLH+MGA D LLP E K++
Sbjct: 493 LPPNAAFQTLVGPTCRNQQLAKQLVCLEACKKLHQMGALDDHLLPSVEEPSEIAVVKSKS 552
Query: 262 NDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSSKSLHLFMYVVKCENIGQSKD 441
G GT + +E + L G W G+ + H + + C + Q
Sbjct: 553 TSAG---AGTTKRKELHGTACIHALSGSW---GEKL--DGATFHAYKFDFSCSIVSQI-- 602
Query: 442 PFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASLVFGGSISI 585
S F +L ++LD +V ++ +DL++ + K+S+ G + +
Sbjct: 603 -----YSGFILLIESKLDDDVGNIELDLYLVAKI-VKSSISSCGVVHL 644
[16][TOP]
>UniRef100_UPI0000DD9A02 Os10g0485600 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000DD9A02
Length = 1605
Score = 74.3 bits (181), Expect = 7e-12
Identities = 46/154 (29%), Positives = 75/154 (48%)
Frame = +1
Query: 70 YSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEKE 249
+ C L LP NA F+ + GP+ SS L++Q V L ACKKLH++G D L+P + +
Sbjct: 626 FKCTLTLPRNAAFQSIVGPLSSSSNLSKQLVSLEACKKLHQLGELNDHLVPLTEEPMDTD 685
Query: 250 KAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSSKSLHLFMYVVKCENIG 429
+++ PGT + +E + L G WI ++ +L+ + C+ G
Sbjct: 686 FTTADEKCISGPGTTKRKELHGTTCVLALSGTWIHDSENI-----TLNTYRIDFLCDQEG 740
Query: 430 QSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFI 531
++ + F +L ELD +V MDLF+
Sbjct: 741 EN-------YAGFVLLMEPELDDDVAPSKMDLFL 767
[17][TOP]
>UniRef100_Q2Q4X7 Dicer-like protein n=1 Tax=Oryza sativa Indica Group
RepID=Q2Q4X7_ORYSI
Length = 1116
Score = 74.3 bits (181), Expect = 7e-12
Identities = 46/154 (29%), Positives = 75/154 (48%)
Frame = +1
Query: 70 YSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEKE 249
+ C L LP NA F+ + GP+ SS L++Q V L ACKKLH++G D L+P + +
Sbjct: 93 FKCTLTLPRNAAFQSIVGPLSSSSNLSKQLVSLEACKKLHQLGELNDHLVPLTEEPMDTD 152
Query: 250 KAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSSKSLHLFMYVVKCENIG 429
+++ PGT + +E + L G WI ++ +L+ + C+ G
Sbjct: 153 FTTADEKCISGPGTTKRKELHGTTCVLALSGTWIHDSENI-----TLNTYRIDFLCDQEG 207
Query: 430 QSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFI 531
++ + F +L ELD +V MDLF+
Sbjct: 208 EN-------YAGFVLLMEPELDDDVAPSKMDLFL 234
[18][TOP]
>UniRef100_B9G6C0 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9G6C0_ORYSJ
Length = 1570
Score = 74.3 bits (181), Expect = 7e-12
Identities = 46/154 (29%), Positives = 75/154 (48%)
Frame = +1
Query: 70 YSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEKE 249
+ C L LP NA F+ + GP+ SS L++Q V L ACKKLH++G D L+P + +
Sbjct: 545 FKCTLTLPRNAAFQSIVGPLSSSSNLSKQLVSLEACKKLHQLGELNDHLVPLTEEPMDTD 604
Query: 250 KAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSSKSLHLFMYVVKCENIG 429
+++ PGT + +E + L G WI ++ +L+ + C+ G
Sbjct: 605 FTTADEKCISGPGTTKRKELHGTTCVLALSGTWIHDSENI-----TLNTYRIDFLCDQEG 659
Query: 430 QSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFI 531
++ + F +L ELD +V MDLF+
Sbjct: 660 EN-------YAGFVLLMEPELDDDVAPSKMDLFL 686
[19][TOP]
>UniRef100_Q7XD96 Endoribonuclease Dicer homolog 3b n=1 Tax=Oryza sativa Japonica Group
RepID=DCL3B_ORYSJ
Length = 1637
Score = 74.3 bits (181), Expect = 7e-12
Identities = 46/154 (29%), Positives = 75/154 (48%)
Frame = +1
Query: 70 YSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEKE 249
+ C L LP NA F+ + GP+ SS L++Q V L ACKKLH++G D L+P + +
Sbjct: 613 FKCTLTLPRNAAFQSIVGPLSSSSNLSKQLVSLEACKKLHQLGELNDHLVPLTEEPMDTD 672
Query: 250 KAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSSKSLHLFMYVVKCENIG 429
+++ PGT + +E + L G WI ++ +L+ + C+ G
Sbjct: 673 FTTADEKCISGPGTTKRKELHGTTCVLALSGTWIHDSENI-----TLNTYRIDFLCDQEG 727
Query: 430 QSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFI 531
++ + F +L ELD +V MDLF+
Sbjct: 728 EN-------YAGFVLLMEPELDDDVAPSKMDLFL 754
[20][TOP]
>UniRef100_C5WYA8 Putative uncharacterized protein Sb01g018890 n=1 Tax=Sorghum bicolor
RepID=C5WYA8_SORBI
Length = 1586
Score = 73.2 bits (178), Expect = 1e-11
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 2/176 (1%)
Frame = +1
Query: 70 YSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEKE 249
Y C L +P NA F + GP S+ LA+Q VCL ACKKLHE+G D L+P + +
Sbjct: 549 YQCALTMPPNAAFRSIVGPPSSTCNLAKQLVCLEACKKLHELGELDDHLVPLTEEPMDID 608
Query: 250 KAEQNDEGDPLPGTARHREFYPEGVADI--LKGEWILSGKDACKSSKSLHLFMYVVKCEN 423
+ + PGT + +E + G+ ++ L G WI + L+ + + +C+
Sbjct: 609 TDTTDKKCVSGPGTTKRKELH--GIINVHGLSGNWIHESETVI-----LNSYTFDFRCDQ 661
Query: 424 IGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASLVFGGSISITE 591
G++ + F +L + LD +V +DLF+ ++ G I + +
Sbjct: 662 EGET-------FAGFVLLMESVLDDDVAHSEIDLFLIPNKMVYTAITPCGKIQLNK 710
[21][TOP]
>UniRef100_B9FG33 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group
RepID=B9FG33_ORYSJ
Length = 1632
Score = 70.9 bits (172), Expect = 7e-11
Identities = 52/176 (29%), Positives = 75/176 (42%)
Frame = +1
Query: 55 DGPTEYSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGS 234
DG C+L LP NA F +G C S A++ CL AC KLH++GA TD LLP GS
Sbjct: 574 DGIEGIICRLILPPNAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGALTDFLLPGPGS 633
Query: 235 GGEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSSKSLHLFMYVVK 414
K N + + + E + + +LK K +L Y VK
Sbjct: 634 RKNKVSVTNNSSNNKVEDDSLREELHEMLIPAVLK-------PSGLKLDSLSNLHFYYVK 686
Query: 415 CENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASLVFGGSIS 582
I + + + F + N L E ++ +DL +AR KA + G I+
Sbjct: 687 FIPIPEDR-----RYQMFGLFVINPLPVEAETLQVDLHLARGRIVKAGIKHLGKIA 737
[22][TOP]
>UniRef100_B8ARP6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8ARP6_ORYSI
Length = 1576
Score = 70.9 bits (172), Expect = 7e-11
Identities = 52/176 (29%), Positives = 75/176 (42%)
Frame = +1
Query: 55 DGPTEYSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGS 234
DG C+L LP NA F +G C S A++ CL AC KLH++GA TD LLP GS
Sbjct: 525 DGIEGIICRLILPPNAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGALTDFLLPGPGS 584
Query: 235 GGEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSSKSLHLFMYVVK 414
K N + + + E + + +LK K +L Y VK
Sbjct: 585 RKNKVSVTNNSSNNKVEDDSLREELHEMLIPAVLK-------PSGLKLDSLSNLHFYYVK 637
Query: 415 CENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASLVFGGSIS 582
I + + + F + N L E ++ +DL +AR KA + G I+
Sbjct: 638 FIPIPEDR-----RYQMFGLFVINPLPVEAETLQVDLHLARGRIVKAGIKHLGKIA 688
[23][TOP]
>UniRef100_A7LFZ6-2 Isoform 2 of Endoribonuclease Dicer homolog 4 n=2 Tax=Oryza sativa
Japonica Group RepID=A7LFZ6-2
Length = 1631
Score = 70.9 bits (172), Expect = 7e-11
Identities = 52/176 (29%), Positives = 75/176 (42%)
Frame = +1
Query: 55 DGPTEYSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGS 234
DG C+L LP NA F +G C S A++ CL AC KLH++GA TD LLP GS
Sbjct: 586 DGIEGIICRLILPPNAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGALTDFLLPGPGS 645
Query: 235 GGEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSSKSLHLFMYVVK 414
K N + + + E + + +LK K +L Y VK
Sbjct: 646 RKNKVSVTNNSSNNKVEDDSLREELHEMLIPAVLK-------PSGLKLDSLSNLHFYYVK 698
Query: 415 CENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASLVFGGSIS 582
I + + + F + N L E ++ +DL +AR KA + G I+
Sbjct: 699 FIPIPEDR-----RYQMFGLFVINPLPVEAETLQVDLHLARGRIVKAGIKHLGKIA 749
[24][TOP]
>UniRef100_A7LFZ6 Endoribonuclease Dicer homolog 4 n=1 Tax=Oryza sativa Japonica Group
RepID=DCL4_ORYSJ
Length = 1657
Score = 70.9 bits (172), Expect = 7e-11
Identities = 52/176 (29%), Positives = 75/176 (42%)
Frame = +1
Query: 55 DGPTEYSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGS 234
DG C+L LP NA F +G C S A++ CL AC KLH++GA TD LLP GS
Sbjct: 612 DGIEGIICRLILPPNAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGALTDFLLPGPGS 671
Query: 235 GGEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSSKSLHLFMYVVK 414
K N + + + E + + +LK K +L Y VK
Sbjct: 672 RKNKVSVTNNSSNNKVEDDSLREELHEMLIPAVLK-------PSGLKLDSLSNLHFYYVK 724
Query: 415 CENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASLVFGGSIS 582
I + + + F + N L E ++ +DL +AR KA + G I+
Sbjct: 725 FIPIPEDR-----RYQMFGLFVINPLPVEAETLQVDLHLARGRIVKAGIKHLGKIA 775
[25][TOP]
>UniRef100_A7P4V9 Chromosome chr4 scaffold_6, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7P4V9_VITVI
Length = 1593
Score = 69.3 bits (168), Expect = 2e-10
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 1/164 (0%)
Frame = +1
Query: 70 YSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEKE 249
Y CKL LP NA F+ + GP + L++Q VCL ACKKLH+MGA D LLP E +
Sbjct: 553 YECKLTLPPNAAFQTIIGPGNKNSHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSEND 612
Query: 250 KAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSSKSLHLFMYVVKCENIG 429
++ GT + +E + L G W A + + +V
Sbjct: 613 IIVKSKGSAAGAGTTKRKELHGTTQTCALSGTWGDKIDGAIFQAYKIDFSCNIVN----- 667
Query: 430 QSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLF-IARTVTTKAS 558
S F +L ++LD +V ++ M+L+ I++ V T S
Sbjct: 668 -------ELYSGFVLLIESKLDDDVGNIEMELYLISKFVRTSVS 704
[26][TOP]
>UniRef100_A5C7D6 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5C7D6_VITVI
Length = 2076
Score = 69.3 bits (168), Expect = 2e-10
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 1/164 (0%)
Frame = +1
Query: 70 YSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEKE 249
Y CKL LP NA F+ + GP + L++Q VCL ACKKLH+MGA D LLP E +
Sbjct: 1627 YECKLTLPPNAAFQTIIGPGNKNSHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSEND 1686
Query: 250 KAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSSKSLHLFMYVVKCENIG 429
++ GT + +E + L G W A + + +V
Sbjct: 1687 IIVKSKGSAAGAGTTKRKELHGTTQTCALSGTWGDKIDGAIFQAYKIDFSCNIVN----- 1741
Query: 430 QSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLF-IARTVTTKAS 558
S F +L ++LD +V ++ M+L+ I++ V T S
Sbjct: 1742 -------ELYSGFVLLIESKLDDDVGNIEMELYLISKFVRTSVS 1778
[27][TOP]
>UniRef100_UPI0001982FF0 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001982FF0
Length = 1661
Score = 67.0 bits (162), Expect = 1e-09
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Frame = +1
Query: 70 YSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEKE 249
Y CKL LP NA F+ + GP + L++Q VCL ACKKLH+MGA D LLP E
Sbjct: 618 YECKLTLPPNAAFQTIIGPGNKNSHLSKQLVCLEACKKLHQMGALDDHLLP------YVE 671
Query: 250 KAEQND----EGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSSKSLHLFMYVVKC 417
+ +ND GT + +E + L G W A + + +V
Sbjct: 672 EPSENDIIVKSKGSAAGTTKRKELHGTTQTCALSGTWGDKIDGAIFQAYKIDFSCNIVN- 730
Query: 418 ENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLF-IARTVTTKAS 558
S F +L ++LD +V ++ M+L+ I++ V T S
Sbjct: 731 -----------ELYSGFVLLIESKLDDDVGNIEMELYLISKFVRTSVS 767
[28][TOP]
>UniRef100_C5XFK3 Putative uncharacterized protein Sb03g043355 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5XFK3_SORBI
Length = 1651
Score = 66.6 bits (161), Expect = 1e-09
Identities = 45/154 (29%), Positives = 71/154 (46%)
Frame = +1
Query: 70 YSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEKE 249
Y C + LP +A F+ L GP +M+ A+Q VCL ACK+LH++GA D L P S E
Sbjct: 619 YECTVTLPSSAMFQLLVGPKARNMQKAKQLVCLDACKRLHQLGALDDHLSP---SVEETP 675
Query: 250 KAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSSKSLHLFMYVVKCENIG 429
+ GT + +E + + G W G D KS L + C+ +
Sbjct: 676 LEISSKSSISTSGTTKRKELHGTTKVLSMSGSW---GSD--KSVTKLQGYKLNFVCDQVD 730
Query: 430 QSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFI 531
Q + DF +L + E ++++DL++
Sbjct: 731 Q-------KYCDFVLLIDTSIAKEAATLNIDLYL 757
[29][TOP]
>UniRef100_B9EVH3 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group
RepID=B9EVH3_ORYSJ
Length = 1839
Score = 63.9 bits (154), Expect = 9e-09
Identities = 50/170 (29%), Positives = 75/170 (44%)
Frame = +1
Query: 22 PEFIMERHEKPDGPTEYSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGA 201
P F H+ DG Y C L LP +A + L GP +M A+Q VCL ACKKLHE+GA
Sbjct: 554 PTFEFTHHD--DG---YVCTLALPPSAVLQILVGPKARNMHKAKQLVCLDACKKLHELGA 608
Query: 202 FTDMLLPDKGSGGEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSS 381
D L + ++ G GT + +E + G W+ + K++
Sbjct: 609 LDDHLCLSVEDPVPEIVSKNKGTG---IGTTKRKELHGTTRIHAWSGNWV-----SKKTA 660
Query: 382 KSLHLFMYVVKCENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFI 531
L + C+ GQ S+F +L L EV ++ +DL++
Sbjct: 661 LKLQSYKMNFVCDQAGQI-------YSEFVLLIDATLPDEVATLEIDLYL 703
[30][TOP]
>UniRef100_B8A862 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8A862_ORYSI
Length = 1858
Score = 63.9 bits (154), Expect = 9e-09
Identities = 50/170 (29%), Positives = 75/170 (44%)
Frame = +1
Query: 22 PEFIMERHEKPDGPTEYSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGA 201
P F H+ DG Y C L LP +A + L GP +M A+Q VCL ACKKLHE+GA
Sbjct: 554 PTFEFTHHD--DG---YVCTLALPPSAVLQILVGPKARNMHKAKQLVCLDACKKLHELGA 608
Query: 202 FTDMLLPDKGSGGEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSS 381
D L + ++ G GT + +E + G W+ + K++
Sbjct: 609 LDDHLCLSVEDPVPEIVSKNKGTG---IGTTKRKELHGTTRIHAWSGNWV-----SKKTA 660
Query: 382 KSLHLFMYVVKCENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFI 531
L + C+ GQ S+F +L L EV ++ +DL++
Sbjct: 661 LKLQSYKMNFVCDQAGQI-------YSEFVLLIDATLPDEVATLEIDLYL 703
[31][TOP]
>UniRef100_Q5N870 Endoribonuclease Dicer homolog 3a n=1 Tax=Oryza sativa Japonica Group
RepID=DCL3A_ORYSJ
Length = 1651
Score = 63.9 bits (154), Expect = 9e-09
Identities = 50/170 (29%), Positives = 75/170 (44%)
Frame = +1
Query: 22 PEFIMERHEKPDGPTEYSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGA 201
P F H+ DG Y C L LP +A + L GP +M A+Q VCL ACKKLHE+GA
Sbjct: 608 PTFEFTHHD--DG---YVCTLALPPSAVLQILVGPKARNMHKAKQLVCLDACKKLHELGA 662
Query: 202 FTDMLLPDKGSGGEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSS 381
D L + ++ G GT + +E + G W+ + K++
Sbjct: 663 LDDHLCLSVEDPVPEIVSKNKGTG---IGTTKRKELHGTTRIHAWSGNWV-----SKKTA 714
Query: 382 KSLHLFMYVVKCENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFI 531
L + C+ GQ S+F +L L EV ++ +DL++
Sbjct: 715 LKLQSYKMNFVCDQAGQI-------YSEFVLLIDATLPDEVATLEIDLYL 757
[32][TOP]
>UniRef100_B3SRQ0 Dicer-like 3 n=1 Tax=Physcomitrella patens RepID=B3SRQ0_PHYPA
Length = 1641
Score = 62.4 bits (150), Expect = 3e-08
Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 4/177 (2%)
Frame = +1
Query: 70 YSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP----DKGSG 237
Y C ++LP +P + G + RLA+QA L AC +LH+ GA D LLP + +
Sbjct: 647 YKCDIKLPFGSPIYEVLGEPQRTSRLAKQATALEACTQLHKAGALDDNLLPSLDFELAAD 706
Query: 238 GEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSSKSLHLFMYVVKC 417
EK +N G GT +E + A+ G W S A LF Y +
Sbjct: 707 VEKIMQPKNSSGF---GTTAQKELHSVAEAEAFTGHWHTSSSGAV-------LFAYYMSF 756
Query: 418 ENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASLVFGGSISIT 588
+ I +D ++F +L G LD +V + ++L + R KA L G ++T
Sbjct: 757 D-IHPVED---EMHANFVLLIGAALDDDVSKLEIELCLTRGRKAKAKLSPLGRTTLT 809
[33][TOP]
>UniRef100_A9SIL6 DsRNA-specific nuclease dicer and related ribonuclease n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9SIL6_PHYPA
Length = 1460
Score = 62.4 bits (150), Expect = 3e-08
Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 4/177 (2%)
Frame = +1
Query: 70 YSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP----DKGSG 237
Y C ++LP +P + G + RLA+QA L AC +LH+ GA D LLP + +
Sbjct: 579 YKCDIKLPFGSPIYEVLGEPQRTSRLAKQATALEACTQLHKAGALDDNLLPSLDFELAAD 638
Query: 238 GEKEKAEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSSKSLHLFMYVVKC 417
EK +N G GT +E + A+ G W S A LF Y +
Sbjct: 639 VEKIMQPKNSSGF---GTTAQKELHSVAEAEAFTGHWHTSSSGAV-------LFAYYMSF 688
Query: 418 ENIGQSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASLVFGGSISIT 588
+ I +D ++F +L G LD +V + ++L + R KA L G ++T
Sbjct: 689 D-IHPVED---EMHANFVLLIGAALDDDVSKLEIELCLTRGRKAKAKLSPLGRTTLT 741
[34][TOP]
>UniRef100_Q01HF5 OSIGBa0157K09-H0214G12.2 protein n=1 Tax=Oryza sativa
RepID=Q01HF5_ORYSA
Length = 1604
Score = 62.0 bits (149), Expect = 3e-08
Identities = 34/95 (35%), Positives = 46/95 (48%)
Frame = +1
Query: 55 DGPTEYSCKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGS 234
DG C+L LP NA F +G C S A++ CL AC KLH++GA TD LLP GS
Sbjct: 586 DGIEGIICRLILPPNAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGALTDFLLPGPGS 645
Query: 235 GGEKEKAEQNDEGDPLPGTARHREFYPEGVADILK 339
K N + + + E + + +LK
Sbjct: 646 RKNKVSVTNNSSNNKVEDDSLREELHEMLIPAVLK 680
[35][TOP]
>UniRef100_B0LAN5 Dicer-1 n=1 Tax=Penaeus monodon RepID=B0LAN5_PENMO
Length = 2473
Score = 61.2 bits (147), Expect = 6e-08
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Frame = +1
Query: 67 EYSCKLQLPCNAPFE-YLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGE 243
+Y CK+ LP N+P + +EGP S + LA+ A L C++LH+M D L P G E
Sbjct: 1148 KYKCKIMLPINSPLKGTIEGPWQSKVSLAKMAAALECCRRLHQMEELDDQLQP---VGKE 1204
Query: 244 KEKA----------EQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKD 366
K +Q EG P PGT + R++ + VA L GE G D
Sbjct: 1205 SMKLDDHLCAPPADDQVPEGMPRPGTTKRRQYCYKKVAVCLTGEQPKQGLD 1255
[36][TOP]
>UniRef100_B3DLA6-2 Isoform 2 of Endoribonuclease Dicer n=1 Tax=Xenopus (Silurana)
tropicalis RepID=B3DLA6-2
Length = 811
Score = 59.7 bits (143), Expect = 2e-07
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PDG Y L LP N+P + GP + RLA +AV L CKKLHE+G D L+P
Sbjct: 648 EFPDGL--YRSTLYLPINSPLRAPIVGPPMNCGRLADRAVALICCKKLHEIGELDDHLMP 705
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILKGEWILSGK 363
K + +E+ + +DE + PG+ + R+ YP+ + + L+ + G+
Sbjct: 706 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRNSYPKPGQ 757
[37][TOP]
>UniRef100_B3DLA6 Endoribonuclease Dicer n=1 Tax=Xenopus (Silurana) tropicalis
RepID=DICER_XENTR
Length = 1893
Score = 59.7 bits (143), Expect = 2e-07
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PDG Y L LP N+P + GP + RLA +AV L CKKLHE+G D L+P
Sbjct: 648 EFPDGL--YRSTLYLPINSPLRAPIVGPPMNCGRLADRAVALICCKKLHEIGELDDHLMP 705
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILKGEWILSGK 363
K + +E+ + +DE + PG+ + R+ YP+ + + L+ + G+
Sbjct: 706 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRNSYPKPGQ 757
[38][TOP]
>UniRef100_UPI00017B54CD UPI00017B54CD related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B54CD
Length = 1915
Score = 58.9 bits (141), Expect = 3e-07
Identities = 32/95 (33%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Frame = +1
Query: 70 YSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP-DKGSGGE 243
+ +L LP N+P ++GPI + +RLA++AV L C+KLH++G D L+P K +
Sbjct: 662 FQSRLYLPINSPLRVPVKGPIMNCVRLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKY 721
Query: 244 KEKAEQNDEGDP----LPGTARHREFYPEGVADIL 336
+E+ + +DE + PG+ + R+ YP+ + + L
Sbjct: 722 EEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECL 756
[39][TOP]
>UniRef100_UPI00017B54CC UPI00017B54CC related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B54CC
Length = 1917
Score = 58.9 bits (141), Expect = 3e-07
Identities = 32/95 (33%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Frame = +1
Query: 70 YSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP-DKGSGGE 243
+ +L LP N+P ++GPI + +RLA++AV L C+KLH++G D L+P K +
Sbjct: 662 FQSRLYLPINSPLRVPVKGPIMNCVRLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKY 721
Query: 244 KEKAEQNDEGDP----LPGTARHREFYPEGVADIL 336
+E+ + +DE + PG+ + R+ YP+ + + L
Sbjct: 722 EEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECL 756
[40][TOP]
>UniRef100_UPI00016E1E6E UPI00016E1E6E related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E1E6E
Length = 1896
Score = 58.9 bits (141), Expect = 3e-07
Identities = 32/95 (33%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Frame = +1
Query: 70 YSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP-DKGSGGE 243
+ +L LP N+P ++GPI + +RLA++AV L C+KLH++G D L+P K +
Sbjct: 663 FQSRLYLPINSPLRIPVKGPIMNCIRLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKY 722
Query: 244 KEKAEQNDEGDP----LPGTARHREFYPEGVADIL 336
+E+ + +DE + PG+ + R+ YP+ + + L
Sbjct: 723 EEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECL 757
[41][TOP]
>UniRef100_UPI00016E1E6D UPI00016E1E6D related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E1E6D
Length = 1907
Score = 58.9 bits (141), Expect = 3e-07
Identities = 32/95 (33%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Frame = +1
Query: 70 YSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP-DKGSGGE 243
+ +L LP N+P ++GPI + +RLA++AV L C+KLH++G D L+P K +
Sbjct: 663 FQSRLYLPINSPLRIPVKGPIMNCIRLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKY 722
Query: 244 KEKAEQNDEGDP----LPGTARHREFYPEGVADIL 336
+E+ + +DE + PG+ + R+ YP+ + + L
Sbjct: 723 EEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECL 757
[42][TOP]
>UniRef100_Q4SZJ8 Chromosome undetermined SCAF11600, whole genome shotgun sequence.
(Fragment) n=1 Tax=Tetraodon nigroviridis
RepID=Q4SZJ8_TETNG
Length = 1479
Score = 58.9 bits (141), Expect = 3e-07
Identities = 32/95 (33%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Frame = +1
Query: 70 YSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP-DKGSGGE 243
+ +L LP N+P ++GPI + +RLA++AV L C+KLH++G D L+P K +
Sbjct: 709 FQSRLYLPINSPLRVPVKGPIMNCVRLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKY 768
Query: 244 KEKAEQNDEGDP----LPGTARHREFYPEGVADIL 336
+E+ + +DE + PG+ + R+ YP+ + + L
Sbjct: 769 EEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECL 803
[43][TOP]
>UniRef100_UPI0001797897 PREDICTED: similar to Endoribonuclease Dicer (Helicase with RNase
motif) (Helicase MOI) n=1 Tax=Equus caballus
RepID=UPI0001797897
Length = 1785
Score = 58.2 bits (139), Expect = 5e-07
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PDG T YS L LP N+P + GP S +RLA++ V L C+KLH++G D L+P
Sbjct: 521 ELPDG-TFYST-LYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMP 578
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILKGEW 348
K + +E+ + +DE + PG+ + R+ YP+ + + L+ +
Sbjct: 579 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 625
[44][TOP]
>UniRef100_UPI0000E23A90 PREDICTED: dicer1 isoform 7 n=1 Tax=Pan troglodytes
RepID=UPI0000E23A90
Length = 1715
Score = 58.2 bits (139), Expect = 5e-07
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PDG T YS L LP N+P + GP S +RLA++ V L C+KLH++G D L+P
Sbjct: 657 ELPDG-TFYST-LYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILKGEW 348
K + +E+ + +DE + PG+ + R+ YP+ + + L+ +
Sbjct: 715 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761
[45][TOP]
>UniRef100_UPI0000E23A8F PREDICTED: dicer1 isoform 2 n=1 Tax=Pan troglodytes
RepID=UPI0000E23A8F
Length = 1868
Score = 58.2 bits (139), Expect = 5e-07
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PDG T YS L LP N+P + GP S +RLA++ V L C+KLH++G D L+P
Sbjct: 657 ELPDG-TFYST-LYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILKGEW 348
K + +E+ + +DE + PG+ + R+ YP+ + + L+ +
Sbjct: 715 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761
[46][TOP]
>UniRef100_UPI0000E23A8E PREDICTED: dicer1 isoform 1 n=1 Tax=Pan troglodytes
RepID=UPI0000E23A8E
Length = 1930
Score = 58.2 bits (139), Expect = 5e-07
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PDG T YS L LP N+P + GP S +RLA++ V L C+KLH++G D L+P
Sbjct: 657 ELPDG-TFYST-LYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILKGEW 348
K + +E+ + +DE + PG+ + R+ YP+ + + L+ +
Sbjct: 715 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761
[47][TOP]
>UniRef100_UPI0000D9BD88 PREDICTED: similar to dicer1 n=1 Tax=Macaca mulatta
RepID=UPI0000D9BD88
Length = 1920
Score = 58.2 bits (139), Expect = 5e-07
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PDG T YS L LP N+P + GP S +RLA++ V L C+KLH++G D L+P
Sbjct: 657 ELPDG-TFYST-LYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILKGEW 348
K + +E+ + +DE + PG+ + R+ YP+ + + L+ +
Sbjct: 715 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761
[48][TOP]
>UniRef100_UPI00005A18B2 PREDICTED: similar to dicer1 isoform 4 n=1 Tax=Canis lupus
familiaris RepID=UPI00005A18B2
Length = 1900
Score = 58.2 bits (139), Expect = 5e-07
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PDG T YS L LP N+P + GP S +RLA++ V L C+KLH++G D L+P
Sbjct: 657 ELPDG-TFYST-LYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILKGEW 348
K + +E+ + +DE + PG+ + R+ YP+ + + L+ +
Sbjct: 715 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761
[49][TOP]
>UniRef100_UPI0000369E6D PREDICTED: dicer1 isoform 5 n=1 Tax=Pan troglodytes
RepID=UPI0000369E6D
Length = 1922
Score = 58.2 bits (139), Expect = 5e-07
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PDG T YS L LP N+P + GP S +RLA++ V L C+KLH++G D L+P
Sbjct: 657 ELPDG-TFYST-LYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILKGEW 348
K + +E+ + +DE + PG+ + R+ YP+ + + L+ +
Sbjct: 715 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761
[50][TOP]
>UniRef100_UPI0000EB2F48 Endoribonuclease Dicer (EC 3.1.26.-) (Helicase with RNase motif)
(Helicase-MOI). n=2 Tax=Canis lupus familiaris
RepID=UPI0000EB2F48
Length = 1913
Score = 58.2 bits (139), Expect = 5e-07
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PDG T YS L LP N+P + GP S +RLA++ V L C+KLH++G D L+P
Sbjct: 647 ELPDG-TFYST-LYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 704
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILKGEW 348
K + +E+ + +DE + PG+ + R+ YP+ + + L+ +
Sbjct: 705 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 751
[51][TOP]
>UniRef100_UPI000179D955 Dicer1, Dcr-1 homolog n=1 Tax=Bos taurus RepID=UPI000179D955
Length = 1920
Score = 58.2 bits (139), Expect = 5e-07
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 6/112 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PDG T YS L LP N+P + GP S +RLA++ V L C+KLH++G D L+P
Sbjct: 656 ELPDG-TFYST-LYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMP 713
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILKGEWILSGK 363
K + +E+ + +DE + PG+ + R+ YP+ + + L+ + G+
Sbjct: 714 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESYPRPGQ 765
[52][TOP]
>UniRef100_UPI0000614190 UPI0000614190 related cluster n=1 Tax=Bos taurus
RepID=UPI0000614190
Length = 1922
Score = 58.2 bits (139), Expect = 5e-07
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 6/112 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PDG T YS L LP N+P + GP S +RLA++ V L C+KLH++G D L+P
Sbjct: 656 ELPDG-TFYST-LYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMP 713
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILKGEWILSGK 363
K + +E+ + +DE + PG+ + R+ YP+ + + L+ + G+
Sbjct: 714 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESYPRPGQ 765
[53][TOP]
>UniRef100_Q9UPY3 Endoribonuclease Dicer n=1 Tax=Homo sapiens RepID=DICER_HUMAN
Length = 1922
Score = 58.2 bits (139), Expect = 5e-07
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PDG T YS L LP N+P + GP S +RLA++ V L C+KLH++G D L+P
Sbjct: 657 ELPDG-TFYST-LYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILKGEW 348
K + +E+ + +DE + PG+ + R+ YP+ + + L+ +
Sbjct: 715 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761
[54][TOP]
>UniRef100_Q6TUI4 Endoribonuclease Dicer n=1 Tax=Bos taurus RepID=DICER_BOVIN
Length = 1923
Score = 58.2 bits (139), Expect = 5e-07
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 6/112 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PDG T YS L LP N+P + GP S +RLA++ V L C+KLH++G D L+P
Sbjct: 656 ELPDG-TFYST-LYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMP 713
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILKGEWILSGK 363
K + +E+ + +DE + PG+ + R+ YP+ + + L+ + G+
Sbjct: 714 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESYPRPGQ 765
[55][TOP]
>UniRef100_Q3SA53 Dicer-like 4 n=1 Tax=Arabidopsis thaliana RepID=Q3SA53_ARATH
Length = 1702
Score = 57.8 bits (138), Expect = 6e-07
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 3/162 (1%)
Frame = +1
Query: 76 CKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEKEKA 255
C++ LP NAP +E + S A++ CL A +LH +G D LLPD E E +
Sbjct: 692 CRITLPANAPISEIESSLLPSTEAAKKDACLKAVHELHNLGVLNDFLLPDSKDEIEDELS 751
Query: 256 EQNDEGDPLPGTARHR-EFYPEGVADILKGEWILSGKDACKSSKSLHLFMYVVKCENIGQ 432
+ + D + G R + Y V + K +W D S +LH + Y++ +
Sbjct: 752 DDEFDFDNIKGEGCSRGDLYEMRVPVLFKQKW-----DPSTSCVNLHSY-YIMFVPH--- 802
Query: 433 SKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIA--RTVTTK 552
P F + L E +M +DL +A R+V+ K
Sbjct: 803 ---PADRIYKKFGFFMKSPLPVEAETMDIDLHLAHQRSVSVK 841
[56][TOP]
>UniRef100_P84634 Dicer-like protein 4 n=1 Tax=Arabidopsis thaliana RepID=DCL4_ARATH
Length = 1589
Score = 57.8 bits (138), Expect = 6e-07
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 3/162 (1%)
Frame = +1
Query: 76 CKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEKEKA 255
C++ LP NAP +E + S A++ CL A +LH +G D LLPD E E +
Sbjct: 670 CRITLPANAPISEIESSLLPSTEAAKKDACLKAVHELHNLGVLNDFLLPDSKDEIEDELS 729
Query: 256 EQNDEGDPLPGTARHR-EFYPEGVADILKGEWILSGKDACKSSKSLHLFMYVVKCENIGQ 432
+ + D + G R + Y V + K +W D S +LH + Y++ +
Sbjct: 730 DDEFDFDNIKGEGCSRGDLYEMRVPVLFKQKW-----DPSTSCVNLHSY-YIMFVPH--- 780
Query: 433 SKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIA--RTVTTK 552
P F + L E +M +DL +A R+V+ K
Sbjct: 781 ---PADRIYKKFGFFMKSPLPVEAETMDIDLHLAHQRSVSVK 819
[57][TOP]
>UniRef100_B7P5Y7 Dicer-1, putative n=1 Tax=Ixodes scapularis RepID=B7P5Y7_IXOSC
Length = 1348
Score = 57.0 bits (136), Expect = 1e-06
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Frame = +1
Query: 70 YSCKLQLPCNAPF-EYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEK 246
Y C + LP +P E ++G + R A+ A L CK+LH+MG D LLP K +
Sbjct: 653 YVCTVYLPMTSPLKEPIQGQPMETKRYAKMAAALETCKRLHQMGELDDNLLPVKRTLALL 712
Query: 247 EKAEQNDE--GDPLPGTARHREFYPEGVADILK 339
E+ E+ E G P PGT + R Y + V + +
Sbjct: 713 EEPEEEAEQPGVPKPGTKKRRRVYSKRVCRLFR 745
[58][TOP]
>UniRef100_UPI00005E850D PREDICTED: similar to Dicer protein n=1 Tax=Monodelphis domestica
RepID=UPI00005E850D
Length = 1923
Score = 56.6 bits (135), Expect = 1e-06
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PDG T YS L LP N+P + GP + RLA++ V L C+KLH++G D L+P
Sbjct: 657 ELPDG-TFYST-LYLPINSPLRAAIVGPQMNCARLAERVVALICCEKLHKIGELDDHLMP 714
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILKGEW 348
K + +E+ + +DE + PG+ + R+ YP+ + + L+ +
Sbjct: 715 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRNSY 761
[59][TOP]
>UniRef100_UPI0000354494 dicer1 n=1 Tax=Mus musculus RepID=UPI0000354494
Length = 1906
Score = 56.6 bits (135), Expect = 1e-06
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PDG T YS L LP N+P + GP S+RLA++ V L C+KLH++G + L+P
Sbjct: 647 ELPDG-TFYST-LYLPINSPLRASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMP 704
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILK 339
K + +E+ + +DE + PG+ + R+ YP+ + + L+
Sbjct: 705 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLR 748
[60][TOP]
>UniRef100_Q6ZQ23 MKIAA0928 protein (Fragment) n=1 Tax=Mus musculus
RepID=Q6ZQ23_MOUSE
Length = 1475
Score = 56.6 bits (135), Expect = 1e-06
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PDG T YS L LP N+P + GP S+RLA++ V L C+KLH++G + L+P
Sbjct: 216 ELPDG-TFYST-LYLPINSPLRASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMP 273
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILK 339
K + +E+ + +DE + PG+ + R+ YP+ + + L+
Sbjct: 274 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLR 317
[61][TOP]
>UniRef100_Q8R418 Endoribonuclease Dicer n=1 Tax=Mus musculus RepID=DICER_MOUSE
Length = 1916
Score = 56.6 bits (135), Expect = 1e-06
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PDG T YS L LP N+P + GP S+RLA++ V L C+KLH++G + L+P
Sbjct: 657 ELPDG-TFYST-LYLPINSPLRASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMP 714
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILK 339
K + +E+ + +DE + PG+ + R+ YP+ + + L+
Sbjct: 715 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLR 758
[62][TOP]
>UniRef100_Q6TV19 Endoribonuclease Dicer n=1 Tax=Danio rerio RepID=DICER_DANRE
Length = 1865
Score = 55.8 bits (133), Expect = 2e-06
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Frame = +1
Query: 70 YSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP-DKGSGGE 243
Y L LP N+P + GP+ + RLA++AV L C+KLH++G D L+P K +
Sbjct: 649 YRSTLFLPINSPLRVPVTGPVMNCARLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKY 708
Query: 244 KEKAEQNDEGDP----LPGTARHREFYPEGVADILKG 342
+E+ + +DE + PG+ + R+ P+ + + L+G
Sbjct: 709 EEELDLHDEEETSVPGRPGSTKRRQCSPKAIPECLRG 745
[63][TOP]
>UniRef100_UPI0000EDDD80 PREDICTED: similar to Dicer protein n=1 Tax=Ornithorhynchus
anatinus RepID=UPI0000EDDD80
Length = 1921
Score = 55.5 bits (132), Expect = 3e-06
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PD T YS L LP N+P + GP S RLA++ V L C+KLH++G D L+P
Sbjct: 657 ELPDS-TFYST-LYLPINSPLRASIVGPPMSCTRLAERVVALICCEKLHKIGELDDHLMP 714
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILKGEW 348
K + +E+ + +DE + PG+ + R+ YP+ + + L+ +
Sbjct: 715 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRNSY 761
[64][TOP]
>UniRef100_B7P5Y8 Dicer-1, putative n=1 Tax=Ixodes scapularis RepID=B7P5Y8_IXOSC
Length = 2050
Score = 55.1 bits (131), Expect = 4e-06
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Frame = +1
Query: 64 TEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP------ 222
T Y C L LP N+P + + G LA+QAV L C++LH+MG D L+P
Sbjct: 776 TLYRCSLHLPINSPLKRCIVGDPMPGKLLAKQAVALKTCEELHKMGELDDNLVPQGKEAM 835
Query: 223 ----DKGSGGEKEKAEQNDEGDPLPGTARHREFY 312
D+ +G E E+ G P PGT + R++Y
Sbjct: 836 RLALDQSAGRFPE--EELQPGAPRPGTTKRRQYY 867
[65][TOP]
>UniRef100_UPI0001B7AFA0 Dicer1 protein n=2 Tax=Rattus norvegicus RepID=UPI0001B7AFA0
Length = 1908
Score = 54.7 bits (130), Expect = 5e-06
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PDG T YS L LP N+P + GP +RLA++ V L C+KLH++G + L+P
Sbjct: 647 ELPDG-TFYST-LYLPINSPLRASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMP 704
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILK 339
K + +E+ + +DE + PG+ + R+ YP+ + + L+
Sbjct: 705 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLR 748
[66][TOP]
>UniRef100_A0MQH0 Endoribonuclease Dicer n=1 Tax=Cricetulus griseus RepID=DICER_CRIGR
Length = 1917
Score = 54.7 bits (130), Expect = 5e-06
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PDG T YS L LP N+P + GP +RLA++ V L C+KLH++G + L+P
Sbjct: 657 ELPDG-TFYST-LYLPINSPLRASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMP 714
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILK 339
K + +E+ + +DE + PG+ + R+ YP+ + + L+
Sbjct: 715 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLR 758
[67][TOP]
>UniRef100_UPI000194C8A8 dicer 1, ribonuclease type III n=1 Tax=Taeniopygia guttata
RepID=UPI000194C8A8
Length = 1921
Score = 54.3 bits (129), Expect = 7e-06
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PD T YS L LP N+P + GP S RLA++ V L C+KLH++G D L+P
Sbjct: 657 ELPDH-TFYST-LYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMP 714
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILKGEW 348
K + +E+ + +DE + PG+ + R+ YP+ + + L+ +
Sbjct: 715 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761
[68][TOP]
>UniRef100_UPI00003ADFAD dicer1 n=1 Tax=Gallus gallus RepID=UPI00003ADFAD
Length = 1921
Score = 54.3 bits (129), Expect = 7e-06
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PD T YS L LP N+P + GP S RLA++ V L C+KLH++G D L+P
Sbjct: 657 ELPDH-TFYST-LYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMP 714
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILKGEW 348
K + +E+ + +DE + PG+ + R+ YP+ + + L+ +
Sbjct: 715 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761
[69][TOP]
>UniRef100_Q25BN1 Endoribonuclease Dicer n=1 Tax=Gallus gallus RepID=DICER_CHICK
Length = 1921
Score = 54.3 bits (129), Expect = 7e-06
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Frame = +1
Query: 46 EKPDGPTEYSCKLQLPCNAPFEY-LEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 222
E PD T YS L LP N+P + GP S RLA++ V L C+KLH++G D L+P
Sbjct: 657 ELPDH-TFYST-LYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMP 714
Query: 223 -DKGSGGEKEKAEQNDEGDP----LPGTARHREFYPEGVADILKGEW 348
K + +E+ + +DE + PG+ + R+ YP+ + + L+ +
Sbjct: 715 VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761
[70][TOP]
>UniRef100_UPI0001985908 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001985908
Length = 1623
Score = 53.9 bits (128), Expect = 9e-06
Identities = 44/173 (25%), Positives = 69/173 (39%)
Frame = +1
Query: 76 CKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEKEKA 255
C++ LP +AP + SSM A++ CL A + LH +GA D LLPD+G+ E+
Sbjct: 610 CQINLPSSAPIHQIVSTPQSSMEAAKKDACLKAIQDLHVLGALNDYLLPDQGNAHEELML 669
Query: 256 EQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSSKSLHLFMYVVKCENIGQS 435
+D E + V LK W + + + L Y +K I +
Sbjct: 670 VSSDSDSCEADEDSREELHEMLVPAALKDSW--------SNLEHICLNSYYIKFTPIPED 721
Query: 436 KDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASLVFGGSISITES 594
+ F + L AE M +DL ++ + LV G E+
Sbjct: 722 R-----IYRKFGLFVKAPLPAEAERMVLDLHLSHGRSVMTELVPSGVTEFDEN 769
[71][TOP]
>UniRef100_B9HAP9 Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9HAP9_POPTR
Length = 1588
Score = 53.9 bits (128), Expect = 9e-06
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 1/167 (0%)
Frame = +1
Query: 76 CKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEKE-K 252
C + LP NAP + G SS+ +A++ CL A ++LH++GA ++ LLP + E E
Sbjct: 633 CHIILPSNAPTHKIVGTPQSSIEVAKKDACLKAIEQLHKLGALSEFLLPQQEDTNELELV 692
Query: 253 AEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSSKSLHLFMYVVKCENIGQ 432
+ +D + RE V +LK W + K +HL Y ++ + +
Sbjct: 693 SSDSDNCEDKDSRGELREML---VPAVLKESW-------TELEKPIHLNSYYIEFCPVPE 742
Query: 433 SKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASLVFGG 573
+ F + L E MS++L +AR + LV G
Sbjct: 743 DR-----IYKQFGLFLKAPLPLEADKMSLELHLARGRSVMTKLVPSG 784
[72][TOP]
>UniRef100_A7QS05 Chromosome undetermined scaffold_155, whole genome shotgun sequence
n=1 Tax=Vitis vinifera RepID=A7QS05_VITVI
Length = 1639
Score = 53.9 bits (128), Expect = 9e-06
Identities = 44/173 (25%), Positives = 69/173 (39%)
Frame = +1
Query: 76 CKLQLPCNAPFEYLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEKEKA 255
C++ LP +AP + SSM A++ CL A + LH +GA D LLPD+G+ E+
Sbjct: 611 CQINLPSSAPIHQIVSTPQSSMEAAKKDACLKAIQDLHVLGALNDYLLPDQGNAHEELML 670
Query: 256 EQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACKSSKSLHLFMYVVKCENIGQS 435
+D E + V LK W + + + L Y +K I +
Sbjct: 671 VSSDSDSCEADEDSREELHEMLVPAALKDSW--------SNLEHICLNSYYIKFTPIPED 722
Query: 436 KDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASLVFGGSISITES 594
+ F + L AE M +DL ++ + LV G E+
Sbjct: 723 R-----IYRKFGLFVKAPLPAEAERMVLDLHLSHGRSVMTELVPSGVTEFDEN 770