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[1][TOP]
>UniRef100_B9S669 tRNA-pseudouridine synthase, putative n=1 Tax=Ricinus communis
RepID=B9S669_RICCO
Length = 513
Score = 103 bits (256), Expect = 8e-21
Identities = 47/53 (88%), Positives = 52/53 (98%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQSY 318
SKGTY+RSLCAD GKALGSCAHLTALRRDSIG+YSADDAWEF+ELEEAIT++Y
Sbjct: 460 SKGTYVRSLCADFGKALGSCAHLTALRRDSIGEYSADDAWEFKELEEAITKNY 512
[2][TOP]
>UniRef100_B9GIJ8 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GIJ8_POPTR
Length = 95
Score = 102 bits (253), Expect = 2e-20
Identities = 47/53 (88%), Positives = 52/53 (98%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQSY 318
SKGTYIRSLCAD GKALGSCAHLTALRRDSIG+YSA+DAWEF+ELEEAIT++Y
Sbjct: 42 SKGTYIRSLCADFGKALGSCAHLTALRRDSIGEYSAEDAWEFKELEEAITKNY 94
[3][TOP]
>UniRef100_UPI0001984B54 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984B54
Length = 520
Score = 99.0 bits (245), Expect = 1e-19
Identities = 46/53 (86%), Positives = 49/53 (92%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQSY 318
SKGTYIRSLCAD GKALGSCAHL ALRRDSIG YSADDAWEF++LEEAIT+ Y
Sbjct: 467 SKGTYIRSLCADFGKALGSCAHLAALRRDSIGPYSADDAWEFKDLEEAITKGY 519
[4][TOP]
>UniRef100_A7PM10 Chromosome chr14 scaffold_21, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PM10_VITVI
Length = 502
Score = 99.0 bits (245), Expect = 1e-19
Identities = 46/53 (86%), Positives = 49/53 (92%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQSY 318
SKGTYIRSLCAD GKALGSCAHL ALRRDSIG YSADDAWEF++LEEAIT+ Y
Sbjct: 449 SKGTYIRSLCADFGKALGSCAHLAALRRDSIGPYSADDAWEFKDLEEAITKGY 501
[5][TOP]
>UniRef100_B6TRU2 Pseudouridylate synthase/ transporter n=1 Tax=Zea mays
RepID=B6TRU2_MAIZE
Length = 490
Score = 98.6 bits (244), Expect = 2e-19
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQSYL 315
SKGTYIRSLCADLGKALGSCAHLTALRRDSIG+YS +DAW F ELEE IT+ YL
Sbjct: 437 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGEYSVNDAWNFDELEEQITKGYL 490
[6][TOP]
>UniRef100_Q9LY83 tRNA synthase-like protein n=1 Tax=Arabidopsis thaliana
RepID=Q9LY83_ARATH
Length = 540
Score = 98.2 bits (243), Expect = 3e-19
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQSY 318
SKGTYIRSLCADL KALGSCAHLTALRRDSIG+YSA+DAWEF ELE AIT++Y
Sbjct: 487 SKGTYIRSLCADLAKALGSCAHLTALRRDSIGEYSANDAWEFNELEAAITKNY 539
[7][TOP]
>UniRef100_Q0WVR7 tRNA synthase-like protein n=1 Tax=Arabidopsis thaliana
RepID=Q0WVR7_ARATH
Length = 540
Score = 98.2 bits (243), Expect = 3e-19
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQSY 318
SKGTYIRSLCADL KALGSCAHLTALRRDSIG+YSA+DAWEF ELE AIT++Y
Sbjct: 487 SKGTYIRSLCADLAKALGSCAHLTALRRDSIGEYSANDAWEFNELEAAITKNY 539
[8][TOP]
>UniRef100_Q65X25 Os05g0108000 protein n=3 Tax=Oryza sativa RepID=Q65X25_ORYSJ
Length = 488
Score = 95.9 bits (237), Expect = 1e-18
Identities = 45/54 (83%), Positives = 48/54 (88%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQSYL 315
SKGTYIRSLCADLGKALGSCAHLTALRRDSIG +S +DAW F ELEE IT+ YL
Sbjct: 435 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGDFSVNDAWSFAELEEQITKGYL 488
[9][TOP]
>UniRef100_B9FM24 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9FM24_ORYSJ
Length = 525
Score = 95.9 bits (237), Expect = 1e-18
Identities = 45/54 (83%), Positives = 48/54 (88%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQSYL 315
SKGTYIRSLCADLGKALGSCAHLTALRRDSIG +S +DAW F ELEE IT+ YL
Sbjct: 472 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGDFSVNDAWSFAELEEQITKGYL 525
[10][TOP]
>UniRef100_B8AWX4 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8AWX4_ORYSI
Length = 488
Score = 95.9 bits (237), Expect = 1e-18
Identities = 45/54 (83%), Positives = 48/54 (88%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQSYL 315
SKGTYIRSLCADLGKALGSCAHLTALRRDSIG +S +DAW F ELEE IT+ YL
Sbjct: 435 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGDFSVNDAWSFAELEEQITKGYL 488
[11][TOP]
>UniRef100_A9T4Z6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9T4Z6_PHYPA
Length = 584
Score = 75.1 bits (183), Expect = 2e-12
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELE 339
SKGTYIRSLCADL ++L SCAHLTALRR+ IG +S +DAW +ELE
Sbjct: 521 SKGTYIRSLCADLARSLNSCAHLTALRREKIGNFSVEDAWPIEELE 566
[12][TOP]
>UniRef100_C1E906 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E906_9CHLO
Length = 230
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEA 333
SKGTY+R+L DLG+ LG+ AHLT LRR+SIG++S +DAW + L EA
Sbjct: 169 SKGTYVRTLAHDLGRNLGTVAHLTELRRESIGEHSVEDAWTVESLFEA 216
[13][TOP]
>UniRef100_C1MSX4 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MSX4_9CHLO
Length = 242
Score = 63.5 bits (153), Expect = 7e-09
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = -1
Query: 473 KGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEA 333
KGTY+R+L DLG++LGS AHLTALRR +G+Y DDAW L +A
Sbjct: 174 KGTYVRTLAHDLGESLGSAAHLTALRRVRVGEYDVDDAWTIDMLNDA 220
[14][TOP]
>UniRef100_C0XSF2 tRNA pseudouridine synthase B n=1 Tax=Corynebacterium
lipophiloflavum DSM 44291 RepID=C0XSF2_9CORY
Length = 300
Score = 60.8 bits (146), Expect = 4e-08
Identities = 31/52 (59%), Positives = 37/52 (71%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQS 321
SKGTYIRSL DLG ALG HLTALRR+++G ++ DDA +LE A T S
Sbjct: 179 SKGTYIRSLARDLGAALGVGGHLTALRREAVGAFTLDDARSLTQLETAPTLS 230
[15][TOP]
>UniRef100_UPI000196B5DA hypothetical protein CATMIT_00125 n=1 Tax=Catenibacterium mitsuokai
DSM 15897 RepID=UPI000196B5DA
Length = 277
Score = 60.5 bits (145), Expect = 6e-08
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEE 336
SKGTYIRSLC D+GKALG AH+TAL R+ G ++ D A +ELEE
Sbjct: 164 SKGTYIRSLCVDIGKALGYPAHMTALVRNQSGHFTIDQAVTLEELEE 210
[16][TOP]
>UniRef100_A2TQM6 Putative tRNA pseudouridine synthase n=1 Tax=Dokdonia donghaensis
MED134 RepID=A2TQM6_9FLAO
Length = 241
Score = 58.2 bits (139), Expect = 3e-07
Identities = 31/52 (59%), Positives = 34/52 (65%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQS 321
SKGTYIRSL D G+ L S AHLTALRR IG YS D+A + ITQS
Sbjct: 185 SKGTYIRSLAFDFGEGLKSGAHLTALRRTKIGNYSVDNAHLLDDFIREITQS 236
[17][TOP]
>UniRef100_Q013U1 Putative tRNA synthase (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q013U1_OSTTA
Length = 320
Score = 57.4 bits (137), Expect = 5e-07
Identities = 27/49 (55%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSI-GQYSADDAWEFQELEEA 333
SKGTY+R+L DL K+LG+ HLTALRR I G++ +DAW ++L EA
Sbjct: 211 SKGTYVRTLAYDLCKSLGTTGHLTALRRTKIGGEFDVEDAWSIEQLAEA 259
[18][TOP]
>UniRef100_A4S143 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S143_OSTLU
Length = 279
Score = 57.0 bits (136), Expect = 6e-07
Identities = 27/49 (55%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIG-QYSADDAWEFQELEEA 333
SKGTY+R+L DL K+LG+ HLTALRR IG ++ +DAW ++L EA
Sbjct: 214 SKGTYVRTLAYDLCKSLGTTGHLTALRRTKIGSEFDVEDAWTIEQLAEA 262
[19][TOP]
>UniRef100_C2M589 tRNA pseudouridine synthase B n=1 Tax=Capnocytophaga gingivalis
ATCC 33624 RepID=C2M589_CAPGI
Length = 229
Score = 56.6 bits (135), Expect = 8e-07
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDA 360
SKGTYIRSL D+GKALGS AHLT+LRR IG +S DA
Sbjct: 177 SKGTYIRSLAHDIGKALGSGAHLTSLRRTQIGNHSVADA 215
[20][TOP]
>UniRef100_A1R520 tRNA pseudouridine synthase B n=1 Tax=Arthrobacter aurescens TC1
RepID=TRUB_ARTAT
Length = 311
Score = 56.6 bits (135), Expect = 8e-07
Identities = 32/66 (48%), Positives = 39/66 (59%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQSYL*LLSCS 297
S GTYIR+L DLG ALG HLTALRR +G YS D A +EL E + + L + S
Sbjct: 173 SSGTYIRALARDLGNALGIGGHLTALRRTQVGPYSLDQARTLEELAEELEVLEMSLAARS 232
Query: 296 LPYDHE 279
L + E
Sbjct: 233 LMPNRE 238
[21][TOP]
>UniRef100_B5RQE1 tRNA pseudouridine 55 synthase n=1 Tax=Borrelia recurrentis A1
RepID=B5RQE1_BORRA
Length = 281
Score = 55.8 bits (133), Expect = 1e-06
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEE 336
SKGTY+RS+ DLG+ALGSCA++ +L+R IG + DA+ F L +
Sbjct: 167 SKGTYVRSIARDLGRALGSCAYVKSLKRTQIGDFKLGDAYCFDNLND 213
[22][TOP]
>UniRef100_B5RMZ7 tRNA pseudouridine 55 synthase n=1 Tax=Borrelia duttonii Ly
RepID=B5RMZ7_BORDL
Length = 281
Score = 55.8 bits (133), Expect = 1e-06
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEE 336
SKGTY+RS+ DLG+ALGSCA++ +L+R IG + DA+ F L +
Sbjct: 167 SKGTYVRSIARDLGRALGSCAYVKSLKRTQIGDFKLGDAYCFDNLND 213
[23][TOP]
>UniRef100_A4BTP6 TRNA pseudouridine synthase B n=1 Tax=Nitrococcus mobilis Nb-231
RepID=A4BTP6_9GAMM
Length = 303
Score = 55.8 bits (133), Expect = 1e-06
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQY-SADDAWEFQELEEAITQSYL*LLSC 300
SKGTY+R+L AD+G+ALG AH++ALRR +G Y A ++++E Q Y L +
Sbjct: 173 SKGTYVRTLVADIGEALGPGAHVSALRRVGLGPYDEAPRMHTWEDIETVAAQGYEALDTL 232
Query: 299 SLPYDHESHYMHFPPL-VNT*VGCFISRFLIIW 204
LP ES +H+P L ++ V +I + +W
Sbjct: 233 LLPM--ESALVHWPALHLSNEVAFYIRQGQPVW 263
[24][TOP]
>UniRef100_A3XQ40 Putative tRNA pseudouridine synthase n=1 Tax=Leeuwenhoekiella
blandensis MED217 RepID=A3XQ40_9FLAO
Length = 237
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/52 (53%), Positives = 33/52 (63%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQS 321
SKGTYIRSL D GKAL S HL+ALRR IG + DA + E A+ Q+
Sbjct: 181 SKGTYIRSLAHDFGKALNSGGHLSALRRTKIGDFDVIDATSLEAFEAALQQA 232
[25][TOP]
>UniRef100_A0JUU8 tRNA pseudouridine synthase B n=1 Tax=Arthrobacter sp. FB24
RepID=TRUB_ARTS2
Length = 306
Score = 55.5 bits (132), Expect = 2e-06
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAI 330
S GTYIR+L DLG+ALG+ HLTALRR +G Y+ D A ++L E +
Sbjct: 173 SSGTYIRALARDLGEALGTGGHLTALRRTQVGPYTLDQARTLEQLAEEL 221
[26][TOP]
>UniRef100_C1ZS87 tRNA pseudouridine synthase B n=1 Tax=Rhodothermus marinus DSM 4252
RepID=C1ZS87_RHOMR
Length = 249
Score = 55.1 bits (131), Expect = 2e-06
Identities = 27/49 (55%), Positives = 31/49 (63%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAI 330
SKGTYIRSL D G+ALG AHL LRR G Y + AW + L EA+
Sbjct: 189 SKGTYIRSLVHDFGQALGCGAHLVELRRTRSGPYRVEQAWTLEALAEAL 237
[27][TOP]
>UniRef100_C0W7D5 tRNA pseudouridine synthase B n=1 Tax=Actinomyces urogenitalis DSM
15434 RepID=C0W7D5_9ACTO
Length = 344
Score = 55.1 bits (131), Expect = 2e-06
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAI 330
S GTY+R+L DLG+ALG AHLTALRR ++G +S D+A ++L +
Sbjct: 193 SSGTYVRALARDLGQALGCGAHLTALRRTAVGPFSLDEAATLEQLAAVV 241
[28][TOP]
>UniRef100_C3PH13 tRNA pseudouridine synthase B n=1 Tax=Corynebacterium aurimucosum
ATCC 700975 RepID=TRUB_CORA7
Length = 297
Score = 55.1 bits (131), Expect = 2e-06
Identities = 27/48 (56%), Positives = 32/48 (66%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEA 333
S GTYIRSL DLG+ALG HLTALRR +G + DDA LE++
Sbjct: 176 SSGTYIRSLARDLGEALGVGGHLTALRRTEVGPFRLDDAHPLDALEDS 223
[29][TOP]
>UniRef100_A3TRY2 TRNA pseudouridine synthase B n=1 Tax=Janibacter sp. HTCC2649
RepID=A3TRY2_9MICO
Length = 312
Score = 54.7 bits (130), Expect = 3e-06
Identities = 25/46 (54%), Positives = 31/46 (67%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELE 339
S GTY+R+L DLG ALGS HLTALRR +G + D A+ +LE
Sbjct: 186 SSGTYVRALARDLGTALGSAGHLTALRRTRVGGFGLDTAYPLSDLE 231
[30][TOP]
>UniRef100_Q9Z5I4 tRNA pseudouridine synthase B n=2 Tax=Mycobacterium leprae
RepID=TRUB_MYCLE
Length = 320
Score = 54.7 bits (130), Expect = 3e-06
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEE 336
S GTYIR+L DLG A G HLT+LRR +G++ D AW ++L E
Sbjct: 185 SSGTYIRALARDLGDAFGVGGHLTSLRRTRVGRFELDQAWSLEDLAE 231
[31][TOP]
>UniRef100_UPI0001B44FBC tRNA pseudouridine synthase B n=1 Tax=Mycobacterium intracellulare
ATCC 13950 RepID=UPI0001B44FBC
Length = 301
Score = 54.3 bits (129), Expect = 4e-06
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQSY 318
S GTYIR+L DLG ALG HLTALRR G++ D A+ EL E SY
Sbjct: 175 SSGTYIRALARDLGAALGVGGHLTALRRTRAGRFGLDQAYSLDELAERPRLSY 227
[32][TOP]
>UniRef100_Q0A799 tRNA pseudouridine synthase B n=1 Tax=Alkalilimnicola ehrlichii
MLHE-1 RepID=Q0A799_ALHEH
Length = 308
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/64 (42%), Positives = 38/64 (59%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQSYL*LLSCS 297
SKGTY+R+L D+G+ALG AH+ LRR +G + D + + LE A + L +C
Sbjct: 174 SKGTYVRTLVEDIGRALGCGAHVIGLRRTGLGPFDDPDMFTLEALEAAAGEGLEALDNCL 233
Query: 296 LPYD 285
LP D
Sbjct: 234 LPMD 237
[33][TOP]
>UniRef100_Q8CXG9 tRNA pseudouridine synthase B n=1 Tax=Oceanobacillus iheyensis
RepID=TRUB_OCEIH
Length = 303
Score = 54.3 bits (129), Expect = 4e-06
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAIT 327
SKGTYIR+LC D+GKALG AH++ L R G +S + F +EEA++
Sbjct: 169 SKGTYIRTLCVDIGKALGYPAHMSLLTRTKTGAFSEKNTVTFDMIEEAVS 218
[34][TOP]
>UniRef100_Q3J9B8 tRNA pseudouridine synthase B n=2 Tax=Nitrosococcus oceani
RepID=TRUB_NITOC
Length = 308
Score = 54.3 bits (129), Expect = 4e-06
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELE 339
SKGTYIR+L D+G+ALG AH+ ALRR +G + A D +ELE
Sbjct: 177 SKGTYIRTLAEDIGRALGCGAHVIALRRTQVGSFGASDMISLEELE 222
[35][TOP]
>UniRef100_UPI0001AEDAB5 tRNA pseudouridine synthase B n=1 Tax=Streptomyces albus J1074
RepID=UPI0001AEDAB5
Length = 301
Score = 53.9 bits (128), Expect = 5e-06
Identities = 26/50 (52%), Positives = 33/50 (66%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAIT 327
S GTYIR+L DLG +LG HLTALRR +G Y D A ++L+E +T
Sbjct: 182 SSGTYIRALARDLGASLGVGGHLTALRRTRVGPYGLDAAKTLEQLQEELT 231
[36][TOP]
>UniRef100_B2GKJ0 tRNA pseudouridine synthase TruB n=1 Tax=Kocuria rhizophila DC2201
RepID=B2GKJ0_KOCRD
Length = 379
Score = 53.9 bits (128), Expect = 5e-06
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAI 330
S GTY+R+L DLG+ALG HLTALRR +G ++ D A +EL E +
Sbjct: 194 SSGTYVRALARDLGEALGVGGHLTALRRTRVGTFTLDQAHTLEELTEQV 242
[37][TOP]
>UniRef100_C5PW72 tRNA pseudouridine synthase n=1 Tax=Sphingobacterium spiritivorum
ATCC 33861 RepID=C5PW72_9SPHI
Length = 236
Score = 53.9 bits (128), Expect = 5e-06
Identities = 25/49 (51%), Positives = 31/49 (63%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAI 330
SKGTYIRS+ D GK L + +HL+ LRR G Y D+AW + L E I
Sbjct: 183 SKGTYIRSIANDFGKLLNNGSHLSELRRTKSGNYHVDNAWNLENLIEVI 231
[38][TOP]
>UniRef100_C2G309 tRNA pseudouridine synthase n=1 Tax=Sphingobacterium spiritivorum
ATCC 33300 RepID=C2G309_9SPHI
Length = 236
Score = 53.9 bits (128), Expect = 5e-06
Identities = 25/49 (51%), Positives = 31/49 (63%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAI 330
SKGTYIRS+ D GK L + +HL+ LRR G Y D+AW + L E I
Sbjct: 183 SKGTYIRSIANDFGKLLNNGSHLSELRRTKSGNYHVDNAWNLENLIEVI 231
[39][TOP]
>UniRef100_C2BRN4 Possible tRNA-pseudouridine synthase I n=1 Tax=Mobiluncus curtisii
ATCC 43063 RepID=C2BRN4_9ACTO
Length = 368
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/49 (55%), Positives = 30/49 (61%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAI 330
S GTY+RSL DLG LG AHLTALRR S+G Y D A E E +
Sbjct: 215 SAGTYVRSLARDLGADLGVGAHLTALRRISVGSYGLDQAHSLSEFETEV 263
[40][TOP]
>UniRef100_P60343 tRNA pseudouridine synthase B n=1 Tax=Corynebacterium diphtheriae
RepID=TRUB_CORDI
Length = 300
Score = 53.9 bits (128), Expect = 5e-06
Identities = 26/47 (55%), Positives = 33/47 (70%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEE 336
S GTYIRSL DLG+ LG HLTALRR +G ++ D+A ++LEE
Sbjct: 179 SSGTYIRSLARDLGEELGVGGHLTALRRTQVGPFTLDNAVTLEKLEE 225
[41][TOP]
>UniRef100_Q7MBF7 tRNA pseudouridine synthase B n=1 Tax=Chromobacterium violaceum
RepID=TRUB_CHRVO
Length = 306
Score = 53.9 bits (128), Expect = 5e-06
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQSYL*LLSCS 297
+KGTYIR+L D+G+ALG AHLTALRR + G +S D++ +LE + LL
Sbjct: 175 TKGTYIRTLGCDIGEALGCGAHLTALRRTATGGFSLDESHRLADLESLDMPAREALL--- 231
Query: 296 LPYDHESHYMHFPPL 252
+P D MHFP L
Sbjct: 232 MPAD--VLVMHFPQL 244
[42][TOP]
>UniRef100_Q9KA80 tRNA pseudouridine synthase B n=1 Tax=Bacillus halodurans
RepID=TRUB_BACHD
Length = 304
Score = 53.9 bits (128), Expect = 5e-06
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQ 324
SKGTY+R+L D+GKALG AH++ L R G +S ++ + F ELEE + Q
Sbjct: 174 SKGTYVRTLAVDIGKALGYPAHMSDLVRTKSGPFSLEECFTFTELEERLEQ 224
[43][TOP]
>UniRef100_UPI0001B5A2C9 tRNA pseudouridine synthase B n=1 Tax=Mycobacterium avium subsp.
avium ATCC 25291 RepID=UPI0001B5A2C9
Length = 284
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQSY 318
S GTY+R+L DLG ALG HLTALRR +G++ + A+ EL E SY
Sbjct: 158 SSGTYVRALARDLGAALGVGGHLTALRRTRVGRFGLEQAYGLDELAECPRLSY 210
[44][TOP]
>UniRef100_C9KEJ4 tRNA pseudouridine synthase B n=1 Tax=Sanguibacter keddieii DSM
10542 RepID=C9KEJ4_9MICO
Length = 343
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 31/46 (67%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELE 339
S GTYIR+L DLG LG HLTALRR +G Y+ D A F+ELE
Sbjct: 211 SSGTYIRALARDLGADLGVGGHLTALRRTRVGGYTLDAARSFEELE 256
[45][TOP]
>UniRef100_C2KR47 Possible tRNA-pseudouridine synthase I n=1 Tax=Mobiluncus mulieris
ATCC 35243 RepID=C2KR47_9ACTO
Length = 371
Score = 53.5 bits (127), Expect = 7e-06
Identities = 29/55 (52%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQEL-EEAITQSYL 315
S GTYIR+L DLG+ LG+ AHLTALRR +G Y + A EL EE TQ +
Sbjct: 231 SAGTYIRALARDLGRDLGTGAHLTALRRTRVGNYGLEAARNLAELGEEVATQGII 285
[46][TOP]
>UniRef100_A6FB64 tRNA pseudouridine synthase B n=1 Tax=Moritella sp. PE36
RepID=A6FB64_9GAMM
Length = 321
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/52 (50%), Positives = 35/52 (67%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQS 321
SKGTYIR++ DLG+ LG AH+T LRR + Y AD F++LEE + Q+
Sbjct: 177 SKGTYIRTIVDDLGELLGCGAHVTMLRRIGVSAYPADRMITFEKLEEMVEQA 228
[47][TOP]
>UniRef100_A5TXT9 Pseudouridylate synthase n=1 Tax=Fusobacterium nucleatum subsp.
polymorphum ATCC 10953 RepID=A5TXT9_FUSNP
Length = 290
Score = 53.5 bits (127), Expect = 7e-06
Identities = 23/49 (46%), Positives = 36/49 (73%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAI 330
SKG YIRSL D+G+ LG+ A +TAL+R +G YS +D++ +++EE +
Sbjct: 168 SKGCYIRSLIYDIGQDLGTYATMTALQRKQVGDYSLEDSYSLEQIEEMV 216
[48][TOP]
>UniRef100_Q73VW3 tRNA pseudouridine synthase B n=1 Tax=Mycobacterium avium subsp.
paratuberculosis RepID=TRUB_MYCPA
Length = 293
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQSY 318
S GTY+R+L DLG ALG HLTALRR +G++ + A+ EL E SY
Sbjct: 172 SSGTYVRALARDLGAALGVGGHLTALRRTRVGRFGLEQAYGLDELAECPRLSY 224
[49][TOP]
>UniRef100_A0QIX1 tRNA pseudouridine synthase B n=1 Tax=Mycobacterium avium 104
RepID=TRUB_MYCA1
Length = 309
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQSY 318
S GTY+R+L DLG ALG HLTALRR +G++ + A+ EL E SY
Sbjct: 172 SSGTYVRALARDLGAALGVGGHLTALRRTRVGRFGLEQAYGLDELAECPRLSY 224
[50][TOP]
>UniRef100_UPI0001B4B181 tRNA pseudouridine synthase B n=1 Tax=Streptomyces hygroscopicus
ATCC 53653 RepID=UPI0001B4B181
Length = 306
Score = 53.1 bits (126), Expect = 9e-06
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAI 330
S GTYIR+L DLG LG+ HLTALRR +G Y + A ++LEE++
Sbjct: 186 SSGTYIRALARDLGAGLGTGGHLTALRRTRVGPYGLEAARTLEQLEESL 234
[51][TOP]
>UniRef100_A0QVP8 tRNA pseudouridine synthase B n=1 Tax=Mycobacterium smegmatis str.
MC2 155 RepID=A0QVP8_MYCS2
Length = 303
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/53 (50%), Positives = 32/53 (60%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQSY 318
S GTYIR+L D+G ALG HLT LRR +G+Y D+A EL E SY
Sbjct: 182 SSGTYIRALARDVGAALGVGGHLTVLRRTRVGRYGLDEAHTLDELAEHPQLSY 234
[52][TOP]
>UniRef100_C7RU79 tRNA pseudouridine synthase B n=1 Tax=Candidatus Accumulibacter
phosphatis clade IIA str. UW-1 RepID=C7RU79_9PROT
Length = 301
Score = 53.1 bits (126), Expect = 9e-06
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQEL 342
SKGTYIR+L DL +LG CAHLTALRR ++G + DA +L
Sbjct: 174 SKGTYIRTLAEDLASSLGCCAHLTALRRTAVGALNVADAVTLDQL 218
[53][TOP]
>UniRef100_C7M8Y8 tRNA pseudouridine synthase B n=1 Tax=Capnocytophaga ochracea DSM
7271 RepID=C7M8Y8_CAPOD
Length = 558
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/39 (66%), Positives = 30/39 (76%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDA 360
SKGTYIRSL D GKALGS +L+ALRR IG +S +DA
Sbjct: 180 SKGTYIRSLANDFGKALGSGGYLSALRRTKIGDFSVNDA 218
[54][TOP]
>UniRef100_B8KRZ7 tRNA pseudouridine synthase B n=1 Tax=gamma proteobacterium NOR51-B
RepID=B8KRZ7_9GAMM
Length = 310
Score = 53.1 bits (126), Expect = 9e-06
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITQ 324
SKGTY+RSL DLG+ALG AH+ LRR G ++ D A ++LE+ +Q
Sbjct: 178 SKGTYVRSLAEDLGRALGLPAHVATLRRTGAGIFTLDQALTMEQLEDIASQ 228
[55][TOP]
>UniRef100_B5S1F6 Trna pseudouridine synthase b (Trna pseudouridine 55synthase)
(Psi55 synthase) (Trna-uridine isomerase) (Trna
pseudouridylate synthase) protein n=1 Tax=Ralstonia
solanacearum RepID=B5S1F6_RALSO
Length = 314
Score = 53.1 bits (126), Expect = 9e-06
Identities = 28/48 (58%), Positives = 32/48 (66%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEA 333
SKGTYIR+L DLG+ALG AHL ALRR +G + D A Q LE A
Sbjct: 185 SKGTYIRTLGEDLGEALGCGAHLVALRRTQVGSLTLDGAVTLQALEAA 232
[56][TOP]
>UniRef100_A3S052 TRNA pseudouridine synthase B n=2 Tax=Ralstonia solanacearum
RepID=A3S052_RALSO
Length = 314
Score = 53.1 bits (126), Expect = 9e-06
Identities = 28/48 (58%), Positives = 32/48 (66%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEA 333
SKGTYIR+L DLG+ALG AHL ALRR +G + D A Q LE A
Sbjct: 185 SKGTYIRTLGEDLGEALGCGAHLVALRRTQVGSLTLDGAVTLQALEAA 232
[57][TOP]
>UniRef100_Q9RB36 tRNA pseudouridine synthase B n=1 Tax=Flavobacterium johnsoniae
UW101 RepID=TRUB_FLAJ1
Length = 229
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/49 (53%), Positives = 32/49 (65%)
Frame = -1
Query: 476 SKGTYIRSLCADLGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAI 330
SKGTYIRSL D GKA+ S +HLT LRR IG Y +A + EE++
Sbjct: 180 SKGTYIRSLAYDFGKAMNSGSHLTVLRRTKIGDYDVKNAIDITLFEESL 228