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[1][TOP]
>UniRef100_C6TIG1 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TIG1_SOYBN
Length = 261
Score = 275 bits (702), Expect = 1e-72
Identities = 140/156 (89%), Positives = 150/156 (96%)
Frame = +1
Query: 1 GPTIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVID 180
GPTIKANAVSQMEAA++ALSTELSKLRTGRASPGMLDHIIVET G+K+PL R+A+VSV+D
Sbjct: 80 GPTIKANAVSQMEAAMAALSTELSKLRTGRASPGMLDHIIVETSGLKMPLNRLAVVSVLD 139
Query: 181 PKTLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSC 360
PKTLSVNPYDP+TLKQLENAIVSSPLGLNPK+DGERLIA IPPLTKEHMQAM KLV KSC
Sbjct: 140 PKTLSVNPYDPETLKQLENAIVSSPLGLNPKSDGERLIAVIPPLTKEHMQAMTKLVAKSC 199
Query: 361 EDARQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
EDARQSIRRARQ+AMDAIKKL SSLPKDDIKRLEKE
Sbjct: 200 EDARQSIRRARQQAMDAIKKLYSSLPKDDIKRLEKE 235
[2][TOP]
>UniRef100_A7PLS2 Chromosome chr14 scaffold_21, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PLS2_VITVI
Length = 258
Score = 244 bits (622), Expect = 3e-63
Identities = 125/156 (80%), Positives = 137/156 (87%)
Frame = +1
Query: 1 GPTIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVID 180
GP +K NA+SQM+AA+ ALS ELSKLRTGRAS GMLDHIIVETGGVK+PL R+A+VSV+D
Sbjct: 77 GPAVKENAMSQMDAAVVALSRELSKLRTGRASAGMLDHIIVETGGVKMPLSRLAVVSVLD 136
Query: 181 PKTLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSC 360
PKTLSV PYD LKQLENAIVSSPLGLNPKADGERLIA IPPLTKEH+QAM K+V KSC
Sbjct: 137 PKTLSVTPYDLDALKQLENAIVSSPLGLNPKADGERLIAVIPPLTKEHIQAMCKVVAKSC 196
Query: 361 EDARQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
ED +QSIRRARQKA+D IKK SSLPKD KRLEKE
Sbjct: 197 EDVKQSIRRARQKALDMIKKAGSSLPKDVAKRLEKE 232
[3][TOP]
>UniRef100_A5BXS5 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5BXS5_VITVI
Length = 258
Score = 244 bits (622), Expect = 3e-63
Identities = 125/156 (80%), Positives = 137/156 (87%)
Frame = +1
Query: 1 GPTIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVID 180
GP +K NA+SQM+AA+ ALS ELSKLRTGRAS GMLDHIIVETGGVK+PL R+A+VSV+D
Sbjct: 77 GPAVKENAMSQMDAAVVALSRELSKLRTGRASAGMLDHIIVETGGVKMPLSRLAVVSVLD 136
Query: 181 PKTLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSC 360
PKTLSV PYD LKQLENAIVSSPLGLNPKADGERLIA IPPLTKEH+QAM K+V KSC
Sbjct: 137 PKTLSVTPYDLDALKQLENAIVSSPLGLNPKADGERLIAVIPPLTKEHIQAMCKVVAKSC 196
Query: 361 EDARQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
ED +QSIRRARQKA+D IKK SSLPKD KRLEKE
Sbjct: 197 EDVKQSIRRARQKALDXIKKAGSSLPKDVAKRLEKE 232
[4][TOP]
>UniRef100_B9GJQ6 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GJQ6_POPTR
Length = 273
Score = 240 bits (612), Expect = 4e-62
Identities = 123/156 (78%), Positives = 134/156 (85%)
Frame = +1
Query: 1 GPTIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVID 180
GPT+K A SQM+AA+ ALS EL KLRTGRAS GMLDHIIVET GVK+PL R A+VSV+D
Sbjct: 92 GPTVKETANSQMDAAVVALSRELQKLRTGRASAGMLDHIIVETDGVKLPLNRSAVVSVMD 151
Query: 181 PKTLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSC 360
KTLSVNPYDP TLKQLENAIVSSPLGLNP+ DG+RLIAAIPPLTKEH QAM K+V KSC
Sbjct: 152 AKTLSVNPYDPNTLKQLENAIVSSPLGLNPQRDGDRLIAAIPPLTKEHTQAMCKVVAKSC 211
Query: 361 EDARQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
ED RQSIRRARQKAMD +KK SS PKDD K+LEKE
Sbjct: 212 EDCRQSIRRARQKAMDTVKKAGSSFPKDDAKKLEKE 247
[5][TOP]
>UniRef100_Q6NQM0 At3g01800 n=1 Tax=Arabidopsis thaliana RepID=Q6NQM0_ARATH
Length = 267
Score = 239 bits (609), Expect = 9e-62
Identities = 119/156 (76%), Positives = 139/156 (89%)
Frame = +1
Query: 1 GPTIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVID 180
GPT+KA A SQMEAAI ALS +L+KLRTGRA+PGMLDHI+VETGGVK+PL +ALVSV+D
Sbjct: 86 GPTVKAAASSQMEAAIDALSRDLTKLRTGRAAPGMLDHIVVETGGVKMPLNHLALVSVLD 145
Query: 181 PKTLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSC 360
PKTLSVNPYDP T+K+LE AIV+SPLGLNPK DG+RL+A+IP LTKEH+QAM K+VTKS
Sbjct: 146 PKTLSVNPYDPDTVKELEKAIVASPLGLNPKLDGQRLVASIPALTKEHIQAMCKIVTKSS 205
Query: 361 EDARQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
E +QSIRRARQKA+D IKK SSLPKD++KRLEKE
Sbjct: 206 EVVKQSIRRARQKALDTIKKAGSSLPKDEVKRLEKE 241
[6][TOP]
>UniRef100_Q67XZ5 Putative ribosome recycling factor n=1 Tax=Arabidopsis thaliana
RepID=Q67XZ5_ARATH
Length = 267
Score = 239 bits (609), Expect = 9e-62
Identities = 119/156 (76%), Positives = 139/156 (89%)
Frame = +1
Query: 1 GPTIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVID 180
GPT+KA A SQMEAAI ALS +L+KLRTGRA+PGMLDHI+VETGGVK+PL +ALVSV+D
Sbjct: 86 GPTVKAAASSQMEAAIDALSRDLTKLRTGRAAPGMLDHIVVETGGVKMPLNHLALVSVLD 145
Query: 181 PKTLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSC 360
PKTLSVNPYDP T+K+LE AIV+SPLGLNPK DG+RL+A+IP LTKEH+QAM K+VTKS
Sbjct: 146 PKTLSVNPYDPDTVKELEKAIVASPLGLNPKLDGQRLVASIPALTKEHIQAMCKIVTKSS 205
Query: 361 EDARQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
E +QSIRRARQKA+D IKK SSLPKD++KRLEKE
Sbjct: 206 EVVKQSIRRARQKALDTIKKAGSSLPKDEVKRLEKE 241
[7][TOP]
>UniRef100_B9RBL6 Ribosome recycling factor, putative n=1 Tax=Ricinus communis
RepID=B9RBL6_RICCO
Length = 262
Score = 229 bits (585), Expect = 5e-59
Identities = 115/156 (73%), Positives = 134/156 (85%)
Frame = +1
Query: 1 GPTIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVID 180
GP +K +A QMEAAI +LS EL+KLRTGRAS GMLDHIIVET GVK+PL R+A+V+V+D
Sbjct: 81 GPAVKESAALQMEAAIVSLSRELTKLRTGRASAGMLDHIIVETDGVKMPLNRLAVVAVMD 140
Query: 181 PKTLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSC 360
PKTLSVNPYDP + LE AIVSSPLGLNP+ DGERLIA+IPPLTKEHMQAM K+V KSC
Sbjct: 141 PKTLSVNPYDPNMVSALEKAIVSSPLGLNPRVDGERLIASIPPLTKEHMQAMCKVVGKSC 200
Query: 361 EDARQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
E+ +QS+RRARQKA+D IKK S+L KDD+KRLEKE
Sbjct: 201 EEVKQSVRRARQKALDTIKKAGSNLSKDDVKRLEKE 236
[8][TOP]
>UniRef100_Q9SGJ1 Putative ribosome recycling factor n=1 Tax=Arabidopsis thaliana
RepID=Q9SGJ1_ARATH
Length = 284
Score = 219 bits (558), Expect = 7e-56
Identities = 115/174 (66%), Positives = 136/174 (78%), Gaps = 18/174 (10%)
Frame = +1
Query: 1 GPTIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVID 180
GPT+KA A SQMEAAI ALS +L+KLRTGRA+PGMLDHI+VETGGVK+PL +ALVSV+D
Sbjct: 85 GPTVKAAASSQMEAAIDALSRDLTKLRTGRAAPGMLDHIVVETGGVKMPLNHLALVSVLD 144
Query: 181 PKTLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIP------------------ 306
PKTLSVNPYDP T+K+LE AIV+SPLGLNPK DG+RL+A+IP
Sbjct: 145 PKTLSVNPYDPDTVKELEKAIVASPLGLNPKLDGQRLVASIPAYESSSLSNFISLRLSLD 204
Query: 307 PLTKEHMQAMNKLVTKSCEDARQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
P+ +QAM K+VTKS E +QSIRRARQKA+D IKK SSLPKD++KRLEKE
Sbjct: 205 PIYLYELQAMCKIVTKSSEVVKQSIRRARQKALDTIKKAGSSLPKDEVKRLEKE 258
[9][TOP]
>UniRef100_C5YBC4 Putative uncharacterized protein Sb06g020970 n=1 Tax=Sorghum
bicolor RepID=C5YBC4_SORBI
Length = 258
Score = 219 bits (557), Expect = 1e-55
Identities = 108/156 (69%), Positives = 134/156 (85%)
Frame = +1
Query: 1 GPTIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVID 180
GPT+K+ A +QM+AA+ ALS ELSKLRTGRA+PGMLDHI+VE GVK+ L RIA+VSV+D
Sbjct: 77 GPTVKSAATAQMDAAVIALSRELSKLRTGRATPGMLDHIMVENAGVKVALNRIAVVSVLD 136
Query: 181 PKTLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSC 360
TLSV PYDP ++K +E+AI+SSPLG+NP DG R+IAAIPPLTKE++QA+ K+VTKS
Sbjct: 137 AHTLSVMPYDPTSMKSIEHAIISSPLGINPTPDGNRIIAAIPPLTKENIQALCKVVTKSA 196
Query: 361 EDARQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
ED +QSIRRARQKA+D IKK SS+PKDD+KR+EKE
Sbjct: 197 EDFKQSIRRARQKALDTIKKSASSMPKDDVKRIEKE 232
[10][TOP]
>UniRef100_A3AV43 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=A3AV43_ORYSJ
Length = 260
Score = 218 bits (556), Expect = 1e-55
Identities = 109/156 (69%), Positives = 132/156 (84%)
Frame = +1
Query: 1 GPTIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVID 180
GPT+K+ A QMEAA+ ALS ELSKLRTGRASPGMLDHI+VET GVK+ L R+A+VSV+D
Sbjct: 79 GPTVKSAATQQMEAAVVALSRELSKLRTGRASPGMLDHIMVETTGVKVALNRLAVVSVLD 138
Query: 181 PKTLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSC 360
TLSV PYDP ++K +E+AI+SSPLG+NP DG R+IA IPPLTKE++QA+ K+VTKS
Sbjct: 139 AHTLSVMPYDPSSMKSIEHAIISSPLGINPTPDGNRIIANIPPLTKENIQALCKVVTKSA 198
Query: 361 EDARQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
ED +QSIRRARQKA+D IKK S +PKDD+KRLEKE
Sbjct: 199 EDFKQSIRRARQKALDTIKKSASGMPKDDVKRLEKE 234
[11][TOP]
>UniRef100_Q7X8U6 Os04g0490400 protein n=2 Tax=Oryza sativa RepID=Q7X8U6_ORYSJ
Length = 260
Score = 218 bits (556), Expect = 1e-55
Identities = 109/156 (69%), Positives = 132/156 (84%)
Frame = +1
Query: 1 GPTIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVID 180
GPT+K+ A QMEAA+ ALS ELSKLRTGRASPGMLDHI+VET GVK+ L R+A+VSV+D
Sbjct: 79 GPTVKSAATQQMEAAVVALSRELSKLRTGRASPGMLDHIMVETTGVKVALNRLAVVSVLD 138
Query: 181 PKTLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSC 360
TLSV PYDP ++K +E+AI+SSPLG+NP DG R+IA IPPLTKE++QA+ K+VTKS
Sbjct: 139 AHTLSVMPYDPSSMKSIEHAIISSPLGINPTPDGNRIIANIPPLTKENIQALCKVVTKSA 198
Query: 361 EDARQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
ED +QSIRRARQKA+D IKK S +PKDD+KRLEKE
Sbjct: 199 EDFKQSIRRARQKALDTIKKSASGMPKDDVKRLEKE 234
[12][TOP]
>UniRef100_B7FJ35 Putative uncharacterized protein (Fragment) n=1 Tax=Medicago
truncatula RepID=B7FJ35_MEDTR
Length = 206
Score = 218 bits (554), Expect = 2e-55
Identities = 110/125 (88%), Positives = 117/125 (93%)
Frame = +1
Query: 1 GPTIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVID 180
GP IKA+A SQMEAA++ALS ELSKLRTGRAS GMLDHIIVETGGVK+PL RIALVSV+D
Sbjct: 82 GPNIKASASSQMEAAMTALSVELSKLRTGRASAGMLDHIIVETGGVKMPLSRIALVSVLD 141
Query: 181 PKTLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSC 360
PKTLSVNPYDP+TLKQLENAIVSSPLGLNP+ DGERLIA IPPLTKEHMQAMNKLVTKSC
Sbjct: 142 PKTLSVNPYDPETLKQLENAIVSSPLGLNPRTDGERLIAVIPPLTKEHMQAMNKLVTKSC 201
Query: 361 EDARQ 375
ED RQ
Sbjct: 202 EDTRQ 206
[13][TOP]
>UniRef100_B6TAV8 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B6TAV8_MAIZE
Length = 259
Score = 216 bits (550), Expect = 6e-55
Identities = 107/156 (68%), Positives = 133/156 (85%)
Frame = +1
Query: 1 GPTIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVID 180
GPT+K+ A +QM+AA+ ALS ELSKLRTGRA+PGMLDHI+VE VK+ L RIA+VSV+D
Sbjct: 78 GPTVKSAATAQMDAAVIALSRELSKLRTGRATPGMLDHIMVENADVKVALNRIAVVSVLD 137
Query: 181 PKTLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSC 360
TLSV PYDP ++K +E+AI+SSPLG+NP DG R+IAAIPPLTKE++QA+ K+VTKS
Sbjct: 138 AHTLSVMPYDPTSMKSIEHAIISSPLGINPTPDGNRIIAAIPPLTKENIQALCKVVTKSA 197
Query: 361 EDARQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
ED +QSIRRARQKA+D IKK SS+PKDD+KR+EKE
Sbjct: 198 EDFKQSIRRARQKALDTIKKSASSMPKDDVKRIEKE 233
[14][TOP]
>UniRef100_A9NVE5 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NVE5_PICSI
Length = 269
Score = 211 bits (536), Expect = 3e-53
Identities = 106/156 (67%), Positives = 129/156 (82%)
Frame = +1
Query: 1 GPTIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVID 180
GPTIK+ A +QM+A I ALS ELSKLRTGRAS GMLDHII+E+ GV+ PL RIA +SV+D
Sbjct: 88 GPTIKSTASTQMQAGIDALSRELSKLRTGRASAGMLDHIIIESDGVRTPLSRIAAISVLD 147
Query: 181 PKTLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSC 360
+TLSV PYD + +K +E AIVSSPLGLNP +G+RL+ IP LTKEH QAM+KLV+K+
Sbjct: 148 SQTLSVTPYDLEAIKDVERAIVSSPLGLNPTLEGQRLVVPIPALTKEHTQAMSKLVSKAS 207
Query: 361 EDARQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
ED +QSIRRARQKA+D+IKK SS+ KDD+KRLEKE
Sbjct: 208 EDVKQSIRRARQKALDSIKKAVSSMSKDDVKRLEKE 243
[15][TOP]
>UniRef100_B8LRE4 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LRE4_PICSI
Length = 269
Score = 210 bits (535), Expect = 3e-53
Identities = 107/156 (68%), Positives = 128/156 (82%)
Frame = +1
Query: 1 GPTIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVID 180
GPTIK+ A +QM+A I ALS ELSKLRTGRAS GMLDHII+E+ GV+ PL RIA VSV+D
Sbjct: 88 GPTIKSTASTQMQAGIDALSRELSKLRTGRASAGMLDHIIIESDGVRTPLSRIAAVSVLD 147
Query: 181 PKTLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSC 360
+TLSV PYD +K +E AIVSSPLGLNP +G+RL+ IP LTKEH QAM+KLV+K+
Sbjct: 148 SQTLSVTPYDLDAIKDVERAIVSSPLGLNPTLEGQRLVVPIPALTKEHTQAMSKLVSKAS 207
Query: 361 EDARQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
ED +QSIRRARQKA+D+IKK SS+ KDD+KRLEKE
Sbjct: 208 EDVKQSIRRARQKALDSIKKAVSSMSKDDVKRLEKE 243
[16][TOP]
>UniRef100_A9SPQ3 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9SPQ3_PHYPA
Length = 192
Score = 161 bits (407), Expect = 2e-38
Identities = 88/156 (56%), Positives = 112/156 (71%)
Frame = +1
Query: 1 GPTIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVID 180
GP+ K A MEAA++ALS ELSKLRTGRA+PGMLDH+ V + GV+ PL +A VSV +
Sbjct: 12 GPSAKETASRLMEAALNALSVELSKLRTGRATPGMLDHVNVMSHGVQTPLSHVAAVSVSN 71
Query: 181 PKTLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSC 360
+TL+V PYD +K++E AI +SPL LNP A+GE L IP LTKEH+Q M+KLV K+
Sbjct: 72 LETLTVMPYDTSMVKEVEKAIRNSPLKLNPMAEGEVLRVPIPKLTKEHIQTMSKLVGKAG 131
Query: 361 EDARQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
E A+ S+RRAR+ AMD I K KD++KR EKE
Sbjct: 132 ETAKLSVRRARKDAMDIISK--GGYSKDEVKRFEKE 165
[17][TOP]
>UniRef100_C1DYB7 Ribosome recycling factor n=1 Tax=Micromonas sp. RCC299
RepID=C1DYB7_9CHLO
Length = 299
Score = 121 bits (303), Expect = 3e-26
Identities = 63/145 (43%), Positives = 94/145 (64%)
Frame = +1
Query: 34 MEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYDP 213
ME+AI AL +L KLRTGRASPGML++++V+ G PL + V+ +P+TL+V YD
Sbjct: 131 MESAIEALERDLGKLRTGRASPGMLENLVVQAYGDHTPLQHLGSVTARNPQTLAVMLYDA 190
Query: 214 QTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRAR 393
+ AI SPLG NP+ DG+ L+ +P + + + + K+ K+ E A+ S+R AR
Sbjct: 191 SLKAAVAAAIRDSPLGFNPREDGDTLVVPVPEMNADVKREVAKMAAKAGETAKISVRNAR 250
Query: 394 QKAMDAIKKLNSSLPKDDIKRLEKE 468
+K MDAIK+ + +P+D+ KR EKE
Sbjct: 251 KKGMDAIKR--AKMPEDEAKRAEKE 273
[18][TOP]
>UniRef100_Q3A398 Ribosome-recycling factor n=1 Tax=Pelobacter carbinolicus DSM 2380
RepID=RRF_PELCD
Length = 185
Score = 120 bits (300), Expect = 6e-26
Identities = 60/151 (39%), Positives = 98/151 (64%), Gaps = 2/151 (1%)
Frame = +1
Query: 22 AVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVN 201
A S M+ A+ +L +++K+RTGRAS +LD ++V+ G PL ++ ++V +P+ +++
Sbjct: 9 ARSGMDKAVESLKKDMTKVRTGRASTSLLDDVMVDYYGTPTPLNQVGTLAVPEPRLITIQ 68
Query: 202 PYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSI 381
P++ + L +E AI + LGLNP +DG + IPP+T+E + M K+V K EDA+ +
Sbjct: 69 PWEKKLLADIERAIFKADLGLNPTSDGNLIRLVIPPMTEERRKEMGKVVRKMGEDAKVGV 128
Query: 382 RRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R AR+ A D +KKL N + +DD+KR EKE
Sbjct: 129 RSARRDANDGMKKLEKNKEISEDDLKRGEKE 159
[19][TOP]
>UniRef100_Q5WFT1 Ribosome-recycling factor n=1 Tax=Bacillus clausii KSM-K16
RepID=RRF_BACSK
Length = 185
Score = 119 bits (298), Expect = 1e-25
Identities = 61/150 (40%), Positives = 100/150 (66%), Gaps = 2/150 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IKA+A ++M+ AI LS EL+KLR GRA+P +LD + VE G + PL ++A V+V + +
Sbjct: 5 IKADAKTRMDKAIDVLSRELAKLRAGRANPALLDRVTVEYYGAQTPLNQLASVTVPEARL 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L + PYD + +E AI+ S LGL P DG+ + AIPPLT+E + + +LV+K+ E++
Sbjct: 65 LLITPYDKTAVASIEKAILKSDLGLTPSNDGQVIRIAIPPLTEERRKDLVRLVSKTAEES 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIK 453
+ ++R R+ A D +KKL + + +D+++
Sbjct: 125 KVAVRNIRRDANDELKKLQKDGEMTEDELR 154
[20][TOP]
>UniRef100_Q1K328 Ribosome recycling factor n=1 Tax=Desulfuromonas acetoxidans DSM
684 RepID=Q1K328_DESAC
Length = 185
Score = 118 bits (296), Expect = 2e-25
Identities = 62/147 (42%), Positives = 94/147 (63%), Gaps = 2/147 (1%)
Frame = +1
Query: 34 MEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYDP 213
M+ AI AL ELSK+RTGRAS +LD + V+ G PL ++ +SV + + +++ P++
Sbjct: 13 MDGAIDALKRELSKVRTGRASVSLLDEVCVDYYGTPTPLNQVGTLSVPEARLITIQPWEK 72
Query: 214 QTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRAR 393
L ++E AI S LGL P +DG+ + +IPPLT+E + M KLV E+ + SIR +R
Sbjct: 73 NLLPEIEKAIFKSDLGLTPSSDGDLIRISIPPLTEERRKEMVKLVKSKSEETKISIRSSR 132
Query: 394 QKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ DA+KKL + + +DD+KR EKE
Sbjct: 133 RDGNDALKKLEKDKEITEDDLKRSEKE 159
[21][TOP]
>UniRef100_C1XJK4 Ribosome recycling factor n=1 Tax=Meiothermus ruber DSM 1279
RepID=C1XJK4_MEIRU
Length = 185
Score = 117 bits (294), Expect = 3e-25
Identities = 65/147 (44%), Positives = 94/147 (63%), Gaps = 2/147 (1%)
Frame = +1
Query: 34 MEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYDP 213
M+ ++ AL L+ +RTGRA+P +L++I VE G +PL ++ VS DP+TL V +DP
Sbjct: 13 MQKSLEALEHHLTTMRTGRANPAILNNIKVEYYGSTMPLNQVGTVSSPDPRTLVVQSWDP 72
Query: 214 QTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRAR 393
LK++E AI S LGLNP G+ L +IPPLT+E + + K V + E+AR ++R R
Sbjct: 73 NMLKEIEKAIRDSDLGLNPTNKGDALYISIPPLTEERRRDLVKSVKQYAEEARIAVRNIR 132
Query: 394 QKAMDAIKKLNSS--LPKDDIKRLEKE 468
++A+D KKL L +DDIKR E E
Sbjct: 133 REALDKAKKLEKEKHLSEDDIKRAEAE 159
[22][TOP]
>UniRef100_Q3Z9H9 Ribosome-recycling factor n=1 Tax=Dehalococcoides ethenogenes 195
RepID=RRF_DEHE1
Length = 185
Score = 116 bits (291), Expect = 7e-25
Identities = 60/144 (41%), Positives = 93/144 (64%), Gaps = 2/144 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+M A++ LS ELS +RTGR+SP +++HI VE GV P+ +A ++ DP+ +++ P+D
Sbjct: 12 KMAASLDVLSQELSGIRTGRSSPALVEHIKVEYAGVPTPINHLASIAAPDPRYITIQPWD 71
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
L +E AI+ S LGL P DG + IPPL++E Q M K+V+K E+ + ++R
Sbjct: 72 RSCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKMVSKRLEEDKIAMRNV 131
Query: 391 RQKAMDAIKKLNSS--LPKDDIKR 456
R+ AMD +KKL S + +DD+KR
Sbjct: 132 RRDAMDEMKKLEKSKEISQDDLKR 155
[23][TOP]
>UniRef100_Q9KA66 Ribosome-recycling factor n=1 Tax=Bacillus halodurans
RepID=RRF_BACHD
Length = 185
Score = 116 bits (290), Expect = 9e-25
Identities = 62/152 (40%), Positives = 94/152 (61%), Gaps = 2/152 (1%)
Frame = +1
Query: 19 NAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSV 198
+A +M A AL EL+KLR GRA+P MLD I VE G + PL ++A +SV + + L +
Sbjct: 8 DAEQRMTKATEALGRELAKLRAGRANPAMLDRITVEYYGAETPLNQLATISVPEARLLVI 67
Query: 199 NPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQS 378
P+D ++ +E AI S LGL P DG + IPPLT+E + + KLV KS E+A+ +
Sbjct: 68 QPFDKSSISDIERAIQKSDLGLTPSNDGTVIRITIPPLTEERRRDLTKLVKKSAEEAKVA 127
Query: 379 IRRARQKAMDAIKK--LNSSLPKDDIKRLEKE 468
+R R+ A D +KK + L +DD++R+ ++
Sbjct: 128 VRNIRRDANDDLKKRQKDGELTEDDLRRVTED 159
[24][TOP]
>UniRef100_A8CT91 Ribosome recycling factor n=1 Tax=Dehalococcoides sp. VS
RepID=A8CT91_9CHLR
Length = 185
Score = 115 bits (289), Expect = 1e-24
Identities = 60/144 (41%), Positives = 92/144 (63%), Gaps = 2/144 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+M A++ LS ELS +RTGR+SP +++HI VE GV P+ +A +S DP+ +++ P+D
Sbjct: 12 KMTASLDVLSQELSGIRTGRSSPALVEHIRVEYAGVPTPINHLAGISAPDPRYITIQPWD 71
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
L +E AI+ S LGL P DG + IPPL++E Q M K+V K E+ + ++R
Sbjct: 72 KSCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKMVNKRLEEDKIAMRNV 131
Query: 391 RQKAMDAIKKLNSS--LPKDDIKR 456
R+ AMD +KKL + + +DD+KR
Sbjct: 132 RRDAMDEMKKLEKAKEISQDDLKR 155
[25][TOP]
>UniRef100_Q2W4C6 Ribosome-recycling factor n=1 Tax=Magnetospirillum magneticum AMB-1
RepID=RRF_MAGSA
Length = 190
Score = 115 bits (289), Expect = 1e-24
Identities = 60/155 (38%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
+K + +M++A+ L E S LR+GRAS +LD ++VE G +PL + V V +P+
Sbjct: 10 LKKDITRRMDSAVEVLKKEFSGLRSGRASINLLDPVVVEAYGQTMPLSQCGTVGVPEPRM 69
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L+V +D +K +E AI ++ LGLNP+ADG+ + IPPL +E + + K+ K E A
Sbjct: 70 LTVQVWDKSQVKAVEKAIANAGLGLNPQADGQMIRVPIPPLNEERRKELQKVAGKYSEQA 129
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R S+R R+ MD +KK+ + + +D+IK+ EKE
Sbjct: 130 RISVRNVRRDGMDTLKKMEKDGHISEDEIKKHEKE 164
[26][TOP]
>UniRef100_B7GG86 Ribosome recycling factor n=1 Tax=Anoxybacillus flavithermus WK1
RepID=B7GG86_ANOFW
Length = 183
Score = 115 bits (288), Expect = 1e-24
Identities = 57/150 (38%), Positives = 96/150 (64%), Gaps = 2/150 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
+ NA +M+ A+ A S EL+ +R GRA+P +L+ I V+ G+ P++++A + V + +
Sbjct: 3 VLTNAKEKMDKAVQAFSRELATIRAGRANPALLEKITVDYYGMPTPIIQLAGIQVPEARL 62
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L + PYD LK++E AI++S LGL P DG + +IPPLT+E + + KLV K E+A
Sbjct: 63 LVIQPYDKSVLKEIEKAILASDLGLTPSNDGSVIRISIPPLTEERRRELVKLVKKYAEEA 122
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIK 453
+ ++R R+ A D +KKL N + +D+++
Sbjct: 123 KVAVRNIRRDANDELKKLEKNGEITEDELR 152
[27][TOP]
>UniRef100_B9S418 Ribosome recycling factor, putative n=1 Tax=Ricinus communis
RepID=B9S418_RICCO
Length = 247
Score = 115 bits (288), Expect = 1e-24
Identities = 64/153 (41%), Positives = 93/153 (60%), Gaps = 2/153 (1%)
Frame = +1
Query: 7 TIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPK 186
+I+ +A ++ME I + T + +RTGRA+P MLD I VE G + L IA +S D
Sbjct: 81 SIEKDAKARMEKTIETVRTNFNSIRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDAS 140
Query: 187 TLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCED 366
+L V PYD +LK +E AIVSS LGL P DGE + +IP LT E + M+K+V K E+
Sbjct: 141 SLLVQPYDKSSLKSIEKAIVSSDLGLTPNNDGEVIRLSIPQLTSERRKEMSKMVAKLAEE 200
Query: 367 ARQSIRRARQKAMDAIKKL--NSSLPKDDIKRL 459
+ ++R R+ A+ A +KL L +D++K L
Sbjct: 201 GKVALRNIRRDALKAYEKLEKEKKLSEDNVKDL 233
[28][TOP]
>UniRef100_B5BAM9 Ribosome-recycling factor n=2 Tax=Salmonella enterica subsp.
enterica serovar Paratyphi A RepID=RRF_SALPK
Length = 185
Score = 115 bits (288), Expect = 1e-24
Identities = 61/155 (39%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A +ME + A T++SK+RTGRASP +LD I+VE G PL ++A V+V D +T
Sbjct: 5 IRKDAEVRMEKCVEAFKTQISKVRTGRASPSLLDGIVVEYYGTLTPLRQLASVTVEDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L +N +D +E AI++S LGLNP + G + +PPLT+E + + K+V E A
Sbjct: 65 LKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDICVPLPPLTEERRKDLTKIVRGEAEQA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R ++R R+ A D +K L + ++ +DD +R ++E
Sbjct: 125 RVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEE 159
[29][TOP]
>UniRef100_B5F8T3 Ribosome-recycling factor n=26 Tax=Salmonella enterica
RepID=RRF_SALA4
Length = 185
Score = 115 bits (287), Expect = 2e-24
Identities = 61/155 (39%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A +ME + A T++SK+RTGRASP +LD I+VE G PL ++A V+V D +T
Sbjct: 5 IRKDAEVRMEKCVEAFKTQISKVRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L +N +D +E AI++S LGLNP + G + +PPLT+E + + K+V E A
Sbjct: 65 LKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R ++R R+ A D +K L + ++ +DD +R ++E
Sbjct: 125 RVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEE 159
[30][TOP]
>UniRef100_A8MHH2 Ribosome-recycling factor n=1 Tax=Alkaliphilus oremlandii OhILAs
RepID=RRF_ALKOO
Length = 185
Score = 115 bits (287), Expect = 2e-24
Identities = 57/155 (36%), Positives = 94/155 (60%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I N +M I+AL EL+ +R GRA+P MLD I+VE G P+ +IA ++ +P+
Sbjct: 5 IHKNLEEKMNKTINALKDELASIRAGRANPAMLDRIVVEYYGSPTPIKQIAAITAPEPRI 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+S+ PYD L +E AI+ S LG+NP DG+ + +P LT+E + + K+ K+ EDA
Sbjct: 65 ISIQPYDGSALSSIEKAILQSDLGVNPSNDGKLIRIIVPQLTEERRKELTKVAKKTSEDA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ +R R+ A D +KK+ ++ + +D++K + E
Sbjct: 125 KVVLRNERRNANDRLKKMQKDNEITEDELKTAQDE 159
[31][TOP]
>UniRef100_C0UW73 Ribosome recycling factor n=1 Tax=Thermobaculum terrenum ATCC
BAA-798 RepID=C0UW73_9BACT
Length = 185
Score = 114 bits (286), Expect = 3e-24
Identities = 55/153 (35%), Positives = 101/153 (66%), Gaps = 2/153 (1%)
Frame = +1
Query: 16 ANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLS 195
A+A +M +I L +L+ +R+GRA+PG+++HI VE GV PL+++A +SV +P+ ++
Sbjct: 7 ADAEKRMRHSIDVLKKDLANIRSGRATPGLVEHIEVEYYGVPTPLIQLASISVPEPRMIA 66
Query: 196 VNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQ 375
+ P+DP ++ +E AI S LGLNP DG+ + +PPLT+E +++ K+V + E+ R
Sbjct: 67 ITPWDPNSIGPIEKAIQKSELGLNPSNDGKIIRILVPPLTEERRRSLVKMVRQRVEEDRV 126
Query: 376 SIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+IR R+ M+ IK++ + +D+ +R +++
Sbjct: 127 AIRNIRRDVMNDIKQMQHEKMISEDEARRAQEK 159
[32][TOP]
>UniRef100_P61304 Ribosome-recycling factor n=1 Tax=Geobacter sulfurreducens
RepID=RRF_GEOSL
Length = 185
Score = 114 bits (285), Expect = 3e-24
Identities = 57/149 (38%), Positives = 99/149 (66%), Gaps = 2/149 (1%)
Frame = +1
Query: 28 SQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPY 207
S ME ++ +L E K+RTGRA+ G+LD I V+ G PL ++A ++V +P+T+++ P+
Sbjct: 11 SHMEKSVESLRREYQKVRTGRANTGLLDEIRVDFYGNPSPLNQVATLAVPEPRTITIQPW 70
Query: 208 DPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRR 387
+ + + +E AI+++ LG P DG+ + ++PPLT+E + + K + K+ EDA+ +IR
Sbjct: 71 ETKMIPVIEKAILNANLGFTPSNDGKLIRISLPPLTEERRKEIVKSLKKTAEDAKIAIRN 130
Query: 388 ARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R+ A+D +KKL + + +DD+KR EKE
Sbjct: 131 IRRDAIDGLKKLEKDKKISEDDLKRAEKE 159
[33][TOP]
>UniRef100_Q39W85 Ribosome-recycling factor n=1 Tax=Geobacter metallireducens GS-15
RepID=RRF_GEOMG
Length = 185
Score = 114 bits (285), Expect = 3e-24
Identities = 57/153 (37%), Positives = 99/153 (64%), Gaps = 2/153 (1%)
Frame = +1
Query: 16 ANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLS 195
A+ + ME ++ AL E K+RTGRA+ G+LD I VE G PL ++A +SV +P+T++
Sbjct: 7 ADMKAHMEKSVDALRREYQKVRTGRATTGLLDDIKVEYYGNPSPLSQVATLSVPEPRTIT 66
Query: 196 VNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQ 375
+ P++ + + +E AI+++ LG P DG+ + ++PPLT+E + + K + K ED +
Sbjct: 67 IQPWEAKLIPVIEKAIMNANLGFTPANDGKTIRISLPPLTEERRKEIVKTLKKMAEDTKV 126
Query: 376 SIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
++R R+ +D++KKL + + +DD+KR EKE
Sbjct: 127 AVRNIRRDGIDSLKKLEKDKKISEDDLKRAEKE 159
[34][TOP]
>UniRef100_B8DSA1 Ribosome-recycling factor n=2 Tax=Desulfovibrio vulgaris
RepID=RRF_DESVM
Length = 186
Score = 114 bits (285), Expect = 3e-24
Identities = 60/152 (39%), Positives = 98/152 (64%), Gaps = 2/152 (1%)
Frame = +1
Query: 7 TIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPK 186
+I +A +ME A+ +L E +KLRTGRAS ++D+I V+ G P+ ++A VSV D +
Sbjct: 5 SILLDAEERMEKALGSLDREFAKLRTGRASTSLVDNIKVDYYGTPTPISQLASVSVPDSR 64
Query: 187 TLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCED 366
TL++ P+D + +E AI+ S LGLNP DG+ + +IPPLT+E + + K+ K E+
Sbjct: 65 TLTIQPWDRSAFQLVEKAIMKSDLGLNPVNDGKIIRISIPPLTEERRKDLVKVARKYTEE 124
Query: 367 ARQSIRRARQKAMDAIKKL--NSSLPKDDIKR 456
A+ ++R R+ A DA+KKL + +DD+++
Sbjct: 125 AKVAVRNVRRDANDALKKLEKGKEISEDDVRK 156
[35][TOP]
>UniRef100_C6QMH7 Ribosome recycling factor n=1 Tax=Geobacillus sp. Y4.1MC1
RepID=C6QMH7_9BACI
Length = 185
Score = 114 bits (284), Expect = 4e-24
Identities = 57/146 (39%), Positives = 92/146 (63%), Gaps = 2/146 (1%)
Frame = +1
Query: 22 AVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVN 201
A +M+ A+ A + EL+ +R GRA+P +L+ I V+ G P++++A +S + + L +
Sbjct: 9 AKEKMDKAVQAFTRELATIRAGRANPSLLEKITVDYYGAPTPIIQLASISAPEARLLVIQ 68
Query: 202 PYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSI 381
PYD +K +E AI+SS LGL P DG + AIPPLT+E + + KLV K EDA+ ++
Sbjct: 69 PYDKSVIKDIEKAILSSDLGLTPSNDGSVIRIAIPPLTEERRRELVKLVKKYSEDAKVAV 128
Query: 382 RRARQKAMDAIKKL--NSSLPKDDIK 453
R R+ A D +KKL N + +D+++
Sbjct: 129 RNIRRDANDELKKLEKNGEITEDELR 154
[36][TOP]
>UniRef100_C5D9B8 Ribosome-recycling factor n=1 Tax=Geobacillus sp. WCH70
RepID=RRF_GEOSW
Length = 185
Score = 114 bits (284), Expect = 4e-24
Identities = 56/146 (38%), Positives = 93/146 (63%), Gaps = 2/146 (1%)
Frame = +1
Query: 22 AVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVN 201
A +M+ A+ A + EL+ +R GRA+P +L+ + V+ G+ P++++A +SV + + L +
Sbjct: 9 AKEKMDKAVQAFTRELATIRAGRANPSLLEKVTVDYYGMPTPIIQLASISVPEARLLVIQ 68
Query: 202 PYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSI 381
PYD +K +E AI+SS LGL P DG + IPPLT+E + + KLV K EDA+ ++
Sbjct: 69 PYDKSVIKDIEKAILSSDLGLTPSNDGSVIRITIPPLTEERRRELVKLVKKYSEDAKVAV 128
Query: 382 RRARQKAMDAIKKL--NSSLPKDDIK 453
R R+ A D +KKL N + +D+++
Sbjct: 129 RNIRRDANDELKKLEKNGEITEDELR 154
[37][TOP]
>UniRef100_Q3ZZC4 Ribosome-recycling factor n=2 Tax=Dehalococcoides RepID=RRF_DEHSC
Length = 185
Score = 114 bits (284), Expect = 4e-24
Identities = 59/144 (40%), Positives = 91/144 (63%), Gaps = 2/144 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+M A++ L ELS +RTGR+SP +++HI VE GV P+ +A +S DP+ +++ P+D
Sbjct: 12 KMSASLDVLLQELSGIRTGRSSPALVEHIRVEYAGVPTPINHLANISAPDPRYITIQPWD 71
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
L +E AI+ S LGL P DG + IPPL++E Q M K+V K E+ + ++R
Sbjct: 72 RSCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKIVNKRLEEDKIAMRNV 131
Query: 391 RQKAMDAIKKLNSS--LPKDDIKR 456
R+ AMD +KKL + + +DD+KR
Sbjct: 132 RRDAMDEMKKLEKAKEISQDDLKR 155
[38][TOP]
>UniRef100_C0WCV1 Ribosome recycling factor n=1 Tax=Acidaminococcus sp. D21
RepID=C0WCV1_9FIRM
Length = 187
Score = 113 bits (283), Expect = 6e-24
Identities = 59/150 (39%), Positives = 98/150 (65%), Gaps = 2/150 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
+KA++ +M +A+ AL TEL+ +RTGRA+P +LD + V+ G P+ ++A VSV +P+
Sbjct: 7 LKADSERKMTSALKALHTELAAIRTGRATPSLLDQVKVDYYGTATPVNQLANVSVPEPRM 66
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+ + P+D +K++E AI++S LGLNP DG + ++P LT+E + + K+V K E A
Sbjct: 67 IVIQPWDKSLMKEIEKAIMTSDLGLNPNNDGTVIRLSLPILTEERRKELVKVVHKKGESA 126
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIK 453
R ++R R++ DA+KKL + +DD K
Sbjct: 127 RVAVRNIRREYNDAVKKLLKGKEITEDDSK 156
[39][TOP]
>UniRef100_A9PJM1 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PJM1_9ROSI
Length = 286
Score = 113 bits (283), Expect = 6e-24
Identities = 63/155 (40%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A +ME I + T + +RTGRA+P MLD I VE G + L IA +S D +
Sbjct: 106 IEDDAKGRMEKTIDTMRTNFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASS 165
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L V PYD +LK +E AIVSS LGL P DGE + +IP LT E + ++K+V K E+
Sbjct: 166 LLVQPYDKSSLKAIEKAIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEG 225
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ ++R R+ A+ A +KL L +D++K L +
Sbjct: 226 KVALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSD 260
[40][TOP]
>UniRef100_C6XJV7 Ribosome recycling factor n=1 Tax=Hirschia baltica ATCC 49814
RepID=C6XJV7_HIRBI
Length = 184
Score = 113 bits (282), Expect = 7e-24
Identities = 61/148 (41%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+ME A+++L TE S LRTGRAS +LD ++V+ G PL ++A +SV +P+ L+VN +D
Sbjct: 11 RMEGAVASLKTEFSGLRTGRASVNLLDTVMVQAYGASTPLAQVASISVPEPRMLAVNVWD 70
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
+ + AI + LGLNP DG+ L IPPL +E + KL K E AR +IR
Sbjct: 71 KTVVGAADKAIREAGLGLNPVMDGQNLRIPIPPLNEERRAELAKLAGKYAESARVAIRNV 130
Query: 391 RQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R+ MD +KK+ + + KD+ K LE +
Sbjct: 131 RRDGMDILKKMEKDGEISKDEQKSLEDD 158
[41][TOP]
>UniRef100_C5NYI7 Ribosome recycling factor n=1 Tax=Gemella haemolysans ATCC 10379
RepID=C5NYI7_9BACL
Length = 185
Score = 113 bits (282), Expect = 7e-24
Identities = 63/150 (42%), Positives = 94/150 (62%), Gaps = 2/150 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I N +ME AI++L EL+ +R G+AS +LD + V+ GV P+ ++A VSV +PK
Sbjct: 5 IMNNLNERMEKAIASLRRELASIRAGKASAAVLDRLTVDYYGVPTPINQVAGVSVPEPKM 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L ++PY+ L +E AI +S LGLNP DG + P LT+E + + KLV K E A
Sbjct: 65 LVISPYEKTLLGDIEKAIQASDLGLNPANDGTVIRIVFPALTEERRKELAKLVGKESEGA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIK 453
+ ++R R+ AMDA+KKL +S + +DD+K
Sbjct: 125 KVAVRNVRRDAMDAMKKLEKSSQITEDDLK 154
[42][TOP]
>UniRef100_B0K9R3 Ribosome-recycling factor n=6 Tax=Thermoanaerobacter
RepID=RRF_THEP3
Length = 184
Score = 113 bits (282), Expect = 7e-24
Identities = 57/148 (38%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+M+ ++S L EL+ +R GRA+P +LD I+V+ G PL R+A ++ +P+ L V P+D
Sbjct: 11 KMQKSLSVLKNELAAIRAGRANPALLDRIMVDYYGTPTPLNRLATITAPEPRVLVVQPWD 70
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
+ +E AI S LG+NP +DG+ L P LT+E + + KLV K E+A+ ++R+
Sbjct: 71 VSKISDIEKAIQKSDLGINPVSDGKVLRLVFPELTEERRKELVKLVHKKAEEAKVAVRQI 130
Query: 391 RQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R+ A DA+KK+ N + +D+ K+ E+E
Sbjct: 131 RRDANDAVKKMEKNGEISEDERKKREEE 158
[43][TOP]
>UniRef100_B2RLV6 Ribosome-recycling factor n=1 Tax=Porphyromonas gingivalis ATCC
33277 RepID=RRF_PORG3
Length = 186
Score = 113 bits (282), Expect = 7e-24
Identities = 61/153 (39%), Positives = 92/153 (60%), Gaps = 2/153 (1%)
Frame = +1
Query: 16 ANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLS 195
A A + ME A+ L +LS +R G+ASP +LD I+V G PL ++A ++ D KT+
Sbjct: 8 AKATANMEKAVEYLDEQLSHVRAGKASPKLLDGIMVMYYGNATPLTQVASINTPDAKTIV 67
Query: 196 VNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQ 375
V P++ +K +E AI+ SPLG+ P+ +GE + +PPLT+E + + K + EDA+
Sbjct: 68 VTPWERSLIKDIEKAIMDSPLGITPENNGELIRLGLPPLTEERRRQLVKQIKGDAEDAKV 127
Query: 376 SIRRARQKAMDAIKK--LNSSLPKDDIKRLEKE 468
S+R AR+ A+DAIKK P+D K E E
Sbjct: 128 SVRNARRDAIDAIKKSVKTDGTPEDVAKDAEAE 160
[44][TOP]
>UniRef100_A7ZHR2 Ribosome-recycling factor n=56 Tax=Enterobacteriaceae
RepID=RRF_ECO24
Length = 185
Score = 113 bits (282), Expect = 7e-24
Identities = 59/155 (38%), Positives = 95/155 (61%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A +M+ + A T++SK+RTGRASP +LD I+VE G PL ++A V+V D +T
Sbjct: 5 IRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L +N +D +E AI++S LGLNP + G + +PPLT+E + + K+V E A
Sbjct: 65 LKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R ++R R+ A D +K L + + +DD +R + +
Sbjct: 125 RVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDD 159
[45][TOP]
>UniRef100_A1VFB2 Ribosome-recycling factor n=1 Tax=Desulfovibrio vulgaris DP4
RepID=RRF_DESVV
Length = 186
Score = 113 bits (282), Expect = 7e-24
Identities = 59/156 (37%), Positives = 98/156 (62%), Gaps = 2/156 (1%)
Frame = +1
Query: 7 TIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPK 186
+I +A +ME AI+AL E S+LRTGRAS ++D I V+ G P+ ++A V+V D +
Sbjct: 5 SILLDAEERMEKAIAALEREFSRLRTGRASASLVDGIKVDYYGTPTPISQVASVAVPDSR 64
Query: 187 TLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCED 366
+++ P+D +E AI+ S LGLNP DG+ + IPPLT+E + + K+ K E+
Sbjct: 65 CITIQPWDRNAFSLIEKAILKSDLGLNPVNDGKIIRINIPPLTEERRKDLGKMARKYAEE 124
Query: 367 ARQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
A+ ++R R+ A + +KKL N L +DD+++ +++
Sbjct: 125 AKVAVRNVRRDANEQLKKLEKNKELSEDDLRKAQED 160
[46][TOP]
>UniRef100_Q72DQ9 Ribosome-recycling factor n=2 Tax=Desulfovibrio vulgaris
RepID=RRF_DESVH
Length = 186
Score = 113 bits (282), Expect = 7e-24
Identities = 59/156 (37%), Positives = 98/156 (62%), Gaps = 2/156 (1%)
Frame = +1
Query: 7 TIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPK 186
+I +A +ME AI+AL E S+LRTGRAS ++D I V+ G P+ ++A V+V D +
Sbjct: 5 SILLDAEERMEKAIAALEREFSRLRTGRASASLVDGIKVDYYGTPTPISQVASVAVPDSR 64
Query: 187 TLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCED 366
+++ P+D +E AI+ S LGLNP DG+ + IPPLT+E + + K+ K E+
Sbjct: 65 CITIQPWDRNAFSLIEKAILKSDLGLNPVNDGKIIRINIPPLTEERRKDLGKMARKYAEE 124
Query: 367 ARQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
A+ ++R R+ A + +KKL N L +DD+++ +++
Sbjct: 125 AKVAVRNVRRDANEQLKKLEKNKELSEDDLRKAQED 160
[47][TOP]
>UniRef100_C6D2T6 Ribosome recycling factor n=1 Tax=Paenibacillus sp. JDR-2
RepID=C6D2T6_PAESJ
Length = 184
Score = 112 bits (281), Expect = 1e-23
Identities = 60/153 (39%), Positives = 90/153 (58%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK +A +ME AI AL +L+ LR GRA+P +LD + VE G P+ ++A ++V D +T
Sbjct: 5 IKKSAEERMEKAIGALKRDLATLRAGRATPALLDRVQVEYYGAPTPVAQLANINVPDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L + P+D ++ +E AI+ S LGL P DG + +PPLT+E + K K E+A
Sbjct: 65 LFIQPWDKSSIAAIEKAIMKSDLGLTPSNDGSAIRITLPPLTEERRSELVKTTKKFGEEA 124
Query: 370 RQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
+ +IR R+ A D IKKL + +D R +E
Sbjct: 125 KVAIRNIRRDANDDIKKLEKTTISEDESRRHQE 157
[48][TOP]
>UniRef100_Q2B7I8 Ribosome recycling factor n=1 Tax=Bacillus sp. NRRL B-14911
RepID=Q2B7I8_9BACI
Length = 185
Score = 112 bits (281), Expect = 1e-23
Identities = 62/148 (41%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
Frame = +1
Query: 16 ANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLS 195
+N+ +M AI A S EL+ +R GRAS +LD I V+ G P+ ++A +SV + + L
Sbjct: 7 SNSKERMTKAIQAYSRELASIRAGRASASLLDRITVDYYGAPTPVNQLAGISVPEARLLV 66
Query: 196 VNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQ 375
+ PYD L ++E AI+ S LGLNP DG L AIP LT+E + + K+V K EDA+
Sbjct: 67 IQPYDKSILGEIEKAIIKSDLGLNPTNDGNLLRLAIPALTEERRKELVKVVKKESEDAKV 126
Query: 376 SIRRARQKAMDAIKKL--NSSLPKDDIK 453
+IR R+ A D +KKL N + +DD++
Sbjct: 127 AIRNIRRDANDDLKKLEKNGEITEDDLR 154
[49][TOP]
>UniRef100_C8WWH7 Ribosome recycling factor n=1 Tax=Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446 RepID=C8WWH7_ALIAC
Length = 187
Score = 112 bits (281), Expect = 1e-23
Identities = 60/149 (40%), Positives = 92/149 (61%), Gaps = 2/149 (1%)
Frame = +1
Query: 19 NAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSV 198
N +M+ AI L E + +R GRA+P MLDH++VE G ++P+ ++A V+ +P+ L +
Sbjct: 10 NLQERMDKAIQNLRREFATVRAGRAAPSMLDHVMVEYYGAQMPVNQVASVTSPEPRLLVI 69
Query: 199 NPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQS 378
+P+D L ++E AI S LGLNP DG + IP LT++ Q + K V K E+AR +
Sbjct: 70 SPWDKSMLSEIEKAIQKSDLGLNPANDGNVIRLTIPALTEQRRQELVKQVRKMAEEARVA 129
Query: 379 IRRARQKAMDAIKKLNSS--LPKDDIKRL 459
IR R+ + IKKL + L +DD++RL
Sbjct: 130 IRNIRRDGNEEIKKLEKAGDLSEDDVRRL 158
[50][TOP]
>UniRef100_Q5L0J9 Ribosome-recycling factor n=3 Tax=Geobacillus RepID=RRF_GEOKA
Length = 185
Score = 112 bits (281), Expect = 1e-23
Identities = 57/151 (37%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
Frame = +1
Query: 22 AVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVN 201
A +M+ A+ A + EL+ +R GRA+ G+L+ + V+ GV P+ ++A +SV + + L +
Sbjct: 9 AKEKMDKAVQAFTRELASIRAGRANAGLLEKVTVDYYGVPTPINQLASISVPEARLLVIQ 68
Query: 202 PYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSI 381
PYD +K++E AI++S LGL P DG + IPPLT+E + + KLV K EDA+ ++
Sbjct: 69 PYDKSAIKEMEKAILASDLGLTPSNDGSVIRLVIPPLTEERRRELAKLVKKYSEDAKVAV 128
Query: 382 RRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R R+ A D +KKL N + +D+++ E
Sbjct: 129 RNIRRDANDELKKLEKNGEITEDELRSYTDE 159
[51][TOP]
>UniRef100_C0GN46 Ribosome recycling factor n=1 Tax=Desulfonatronospira thiodismutans
ASO3-1 RepID=C0GN46_9DELT
Length = 184
Score = 112 bits (281), Expect = 1e-23
Identities = 58/148 (39%), Positives = 97/148 (65%), Gaps = 2/148 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+M+ AI++L +L+KLRTGRAS G++D I VE G PL ++A +S+ D +T+++ P+D
Sbjct: 11 KMDKAIASLDKDLAKLRTGRASVGLVDGITVEYYGTMTPLNQLASISIPDSRTIAIQPWD 70
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
+E AI+ S LGLNP +DG+ + IPPLT+E + + K+ K EDA+ ++R
Sbjct: 71 RNVFSGIEKAIMKSDLGLNPVSDGKIIRINIPPLTEERRKDLVKMAKKYSEDAKVALRNV 130
Query: 391 RQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R++A D +KK+ + L +D++ + +E
Sbjct: 131 RREANDTLKKMKNDKDLTEDEMHKGHEE 158
[52][TOP]
>UniRef100_B7A6B2 Ribosome recycling factor n=1 Tax=Thermus aquaticus Y51MC23
RepID=B7A6B2_THEAQ
Length = 185
Score = 112 bits (281), Expect = 1e-23
Identities = 66/153 (43%), Positives = 89/153 (58%), Gaps = 2/153 (1%)
Frame = +1
Query: 16 ANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLS 195
A S M+ ++ AL LS LRTGRA+P +L H+ VE G +PL +IA VS D +TL
Sbjct: 8 AETRSHMQKSLEALEHNLSGLRTGRANPALLLHLKVEYYGTPVPLSQIATVSAPDARTLV 67
Query: 196 VNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQ 375
V +D LK +E AI S LGLNP G+ L IPPLT+E + + K E+ R
Sbjct: 68 VQSWDQNALKAIEKAIRDSDLGLNPSNKGDALYINIPPLTEERRKELVKAARHYAEEGRI 127
Query: 376 SIRRARQKAMDAIKKLNSS--LPKDDIKRLEKE 468
+IR R++A++ +KKL L +DD KR E E
Sbjct: 128 AIRNIRREALEKLKKLAKELHLSEDDTKRAEAE 160
[53][TOP]
>UniRef100_B1EM98 Ribosome releasing factor n=1 Tax=Escherichia albertii TW07627
RepID=B1EM98_9ESCH
Length = 185
Score = 112 bits (281), Expect = 1e-23
Identities = 59/155 (38%), Positives = 94/155 (60%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A +M+ + A T++SK+RTGRASP +LD I+VE G PL ++A V+V D +T
Sbjct: 5 IRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L +N +D +E AI++S LGLNP + G + +PPLT+E + + K+V E A
Sbjct: 65 LKINVFDRSMSAAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R ++R R+ A D +K L + +DD +R + +
Sbjct: 125 RVAVRNVRRDANDKVKALLKEKEISEDDDRRSQDD 159
[54][TOP]
>UniRef100_C1MQP9 Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MQP9_9CHLO
Length = 167
Score = 112 bits (281), Expect = 1e-23
Identities = 62/146 (42%), Positives = 93/146 (63%), Gaps = 1/146 (0%)
Frame = +1
Query: 34 MEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYDP 213
M+AA+ AL +L KLRTGRASPGML+ ++V+ G PL + V+ + +TL+V YDP
Sbjct: 1 MDAAVEALERDLGKLRTGRASPGMLESLVVDAYGEPTPLRNLGSVTARNAQTLAVMLYDP 60
Query: 214 QTLKQLENAIVSSPLGLNPKADGE-RLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
++NAI SPLG NP+ DG+ L+ +P +T E + KL ++ E A+ S+R A
Sbjct: 61 TLKGAVQNAITESPLGFNPQEDGDGTLLVPVPEMTHETKVQVAKLCHRAGETAKISVRNA 120
Query: 391 RQKAMDAIKKLNSSLPKDDIKRLEKE 468
R+K MD IKK +++ +D+ R EK+
Sbjct: 121 RRKGMDVIKK--ATMTEDEGNRAEKD 144
[55][TOP]
>UniRef100_Q72KE0 Ribosome-recycling factor n=2 Tax=Thermus thermophilus
RepID=RRF_THET2
Length = 185
Score = 112 bits (281), Expect = 1e-23
Identities = 64/153 (41%), Positives = 91/153 (59%), Gaps = 2/153 (1%)
Frame = +1
Query: 16 ANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLS 195
A S M+ ++ L L+ LRTGRA+P +L H+ VE G +PL +IA V+ DP+TL
Sbjct: 8 AETRSHMQKSLEVLEHNLAGLRTGRANPALLLHLKVEYYGAHVPLNQIATVTAPDPRTLV 67
Query: 196 VNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQ 375
V +D LK +E AI S LGLNP G+ L IPPLT+E + + + V + E+ R
Sbjct: 68 VQSWDQNALKAIEKAIRDSDLGLNPSNKGDALYINIPPLTEERRKDLVRAVRQYAEEGRV 127
Query: 376 SIRRARQKAMDAIKKLNSS--LPKDDIKRLEKE 468
+IR R++A+D +KKL L +D+ KR E E
Sbjct: 128 AIRNIRREALDKLKKLAKELHLSEDETKRAEAE 160
[56][TOP]
>UniRef100_A6LSP3 Ribosome-recycling factor n=1 Tax=Clostridium beijerinckii NCIMB
8052 RepID=RRF_CLOB8
Length = 185
Score = 112 bits (281), Expect = 1e-23
Identities = 63/152 (41%), Positives = 94/152 (61%), Gaps = 2/152 (1%)
Frame = +1
Query: 19 NAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSV 198
NA +M+ IS L ++LS ++ GRA+P MLD I VE G PL ++A VS +P+ L +
Sbjct: 8 NAEEKMKKTISVLKSDLSTMKAGRANPTMLDRIHVEYYGSMCPLSQVANVSAPEPRVLMI 67
Query: 199 NPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQS 378
P++ LK++E AI+ S LGLNP +DG + IP LT+E + + K V K+ E+A+ +
Sbjct: 68 TPWEKPLLKEIEKAILKSDLGLNPSSDGSIIRLVIPELTEETRKTLVKNVKKTGEEAKVA 127
Query: 379 IRRARQKAMDAIK--KLNSSLPKDDIKRLEKE 468
IR R+ A D IK K + L +D +K+ E E
Sbjct: 128 IRSIRKTANDKIKALKKDEDLSEDQVKKAEDE 159
[57][TOP]
>UniRef100_UPI0001788746 ribosome recycling factor n=1 Tax=Geobacillus sp. Y412MC10
RepID=UPI0001788746
Length = 184
Score = 112 bits (280), Expect = 1e-23
Identities = 60/154 (38%), Positives = 92/154 (59%)
Frame = +1
Query: 7 TIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPK 186
++K NA +ME AI +L +L+ LR GRA+P +LD I VE G + PL ++A +S D +
Sbjct: 4 SVKKNAEERMEKAILSLKRDLATLRAGRAAPALLDRITVEYYGAQTPLNQLANISTPDSR 63
Query: 187 TLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCED 366
TL + P+D +L +E AI+ S +GL P DG ++ +P LT+E + K+ K E+
Sbjct: 64 TLMIQPWDKSSLADIEKAIMKSDIGLTPANDGNQIRLVVPALTEERRTELVKMTKKFGEE 123
Query: 367 ARQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
A+ +IR R+ A D IKKL + +D R +E
Sbjct: 124 AKVAIRNIRRDANDDIKKLEKTDISEDESRRHQE 157
[58][TOP]
>UniRef100_A4IMC6 Ribosome-recycling factor n=2 Tax=Geobacillus RepID=RRF_GEOTN
Length = 185
Score = 112 bits (280), Expect = 1e-23
Identities = 57/151 (37%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Frame = +1
Query: 22 AVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVN 201
A +M+ A+ A S EL+ +R GRA+ G+L+ + V+ GV P+ ++A +SV + + L +
Sbjct: 9 AKEKMDKAVQAFSRELATVRAGRANAGLLEKVTVDYYGVATPINQLATISVPEARMLVIQ 68
Query: 202 PYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSI 381
PYD +K++E AI++S LG+ P DG + IPPLT+E + + KLV K E+A+ ++
Sbjct: 69 PYDKSVIKEMEKAILASDLGVTPSNDGSVIRLVIPPLTEERRRELAKLVKKYSEEAKVAV 128
Query: 382 RRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R R+ A D +KKL NS + +D+++ E
Sbjct: 129 RNIRRDANDELKKLEKNSEITEDELRSYTDE 159
[59][TOP]
>UniRef100_C6WVX2 Ribosome recycling factor n=1 Tax=Methylotenera mobilis JLW8
RepID=C6WVX2_METML
Length = 185
Score = 112 bits (279), Expect = 2e-23
Identities = 58/155 (37%), Positives = 100/155 (64%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
+K NA +M+ ++ AL +L+K+RTGRA G+LDH++VE G + + ++A V++ D +T
Sbjct: 5 VKKNADLKMQKSLEALKNDLAKVRTGRAHVGLLDHVMVEYYGSMVAVNQVANVNLGDART 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
++V PY+ + ++E AI S LGLNP +G+ + +P LT+E + + K+V E A
Sbjct: 65 INVQPYEKNMIAKVEKAIRDSDLGLNPATNGDLIRVPMPMLTEERRRDLTKIVRTEGEGA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ +IR R+ A DA+KKL + ++ +DD +R + E
Sbjct: 125 KVAIRNVRRDANDALKKLVKDKAISEDDERRAQDE 159
[60][TOP]
>UniRef100_C7BL93 Ribosome recycling factor (Ribosome-releasing factor) (Rrf) n=1
Tax=Photorhabdus asymbiotica RepID=C7BL93_9ENTR
Length = 185
Score = 112 bits (279), Expect = 2e-23
Identities = 63/155 (40%), Positives = 93/155 (60%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK +A +ME ++ AL ++SK+RTGRASP +LD I VE G PL +IA V+ D +T
Sbjct: 5 IKKDAQDRMEKSVEALKNQISKVRTGRASPSLLDGITVEYYGAPTPLRQIANVTAEDART 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L++ +D +E AI+SS LGLNP + G + +PPLT+E + + K+V E
Sbjct: 65 LAITVFDRSMTPAIEKAIMSSDLGLNPSSAGTIIRVPLPPLTEERRKDLIKVVRGEAEQG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R S+R R+ A D IK L + + +DD +R + E
Sbjct: 125 RVSVRNIRRDANDKIKALLKDKEISEDDERRAQDE 159
[61][TOP]
>UniRef100_B7DMI7 Ribosome recycling factor n=1 Tax=Alicyclobacillus acidocaldarius
LAA1 RepID=B7DMI7_9BACL
Length = 187
Score = 112 bits (279), Expect = 2e-23
Identities = 59/149 (39%), Positives = 92/149 (61%), Gaps = 2/149 (1%)
Frame = +1
Query: 19 NAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSV 198
N +M+ AI L E + +R GRA+P MLDH++VE G ++P+ ++A V+ +P+ L +
Sbjct: 10 NLQERMDKAIQNLRREFATVRAGRAAPSMLDHVMVEYYGAQMPVNQVASVTSPEPRLLVI 69
Query: 199 NPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQS 378
+P+D L ++E AI S LGLNP DG + IP LT++ Q + K V K E+AR +
Sbjct: 70 SPWDKSMLSEIEKAIQKSDLGLNPANDGNVIRLTIPALTEQRRQELVKQVRKMAEEARVA 129
Query: 379 IRRARQKAMDAIKKLNSS--LPKDDIKRL 459
IR R+ + IKKL + + +DD++RL
Sbjct: 130 IRNIRRDGNEEIKKLEKAGDISEDDVRRL 158
[62][TOP]
>UniRef100_B5JJ87 Ribosome recycling factor n=1 Tax=Verrucomicrobiae bacterium DG1235
RepID=B5JJ87_9BACT
Length = 186
Score = 112 bits (279), Expect = 2e-23
Identities = 58/156 (37%), Positives = 98/156 (62%), Gaps = 2/156 (1%)
Frame = +1
Query: 7 TIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPK 186
TI ++E AI + E + + TG+A+PGM++ I VE G ++ L +A ++ D +
Sbjct: 5 TIFLTLEEKVEKAIEHTANEFAGVNTGKANPGMVEGISVEAYGSQMSLKEMAAITTPDAR 64
Query: 187 TLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCED 366
T+++ P+D +K +E AI++S +G+ P G+ + +P LT E Q++ K+V+K ED
Sbjct: 65 TIAIQPWDKSVIKAIEKAILTSNIGITPAIMGDVIRLPLPELTGERRQSLVKVVSKQAED 124
Query: 367 ARQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R +IR +R+ AMDAIKKL + + +DD+KR EK+
Sbjct: 125 GRVAIRNSRRDAMDAIKKLQKDGDISEDDLKRCEKD 160
[63][TOP]
>UniRef100_Q014Z6 COG0233: Ribosome recycling factor (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q014Z6_OSTTA
Length = 529
Score = 112 bits (279), Expect = 2e-23
Identities = 63/146 (43%), Positives = 92/146 (63%)
Frame = +1
Query: 28 SQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPY 207
++ E A+ AL +LS LRT RAS GM+DHIIV+ G PL +A ++ + +TLSV +
Sbjct: 65 AKFEQAVHALDVDLSHLRTARASEGMIDHIIVDVYGAPTPLSHVATITAPNAQTLSVTLF 124
Query: 208 DPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRR 387
DP T +E AI++SPLGL P+A + LI IP +T++ + + KL K E A+ + R
Sbjct: 125 DPSTKPSVEKAIMNSPLGLVPRATSDGLIVPIPAMTQDTRKEVCKLAHKLGETAKIAARN 184
Query: 388 ARQKAMDAIKKLNSSLPKDDIKRLEK 465
R KA+ IK+ +S +D+ KRLEK
Sbjct: 185 IRHKALKHIKRAAAS--EDEQKRLEK 208
[64][TOP]
>UniRef100_Q7MTP6 Ribosome-recycling factor n=1 Tax=Porphyromonas gingivalis
RepID=RRF_PORGI
Length = 186
Score = 112 bits (279), Expect = 2e-23
Identities = 61/153 (39%), Positives = 91/153 (59%), Gaps = 2/153 (1%)
Frame = +1
Query: 16 ANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLS 195
A A + ME A+ L +LS +R G+ASP +LD I+V G PL ++A ++ D KT+
Sbjct: 8 AKATANMEKAVEYLDEQLSHVRAGKASPKLLDGIMVMYYGNATPLTQVASINTPDAKTIV 67
Query: 196 VNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQ 375
V P++ +K +E AI+ SPLG+ P+ +GE + +PPLT+E + + K EDA+
Sbjct: 68 VTPWERSLIKDIEKAIMDSPLGITPENNGELIRLGLPPLTEERRRQLVKQTKGDAEDAKV 127
Query: 376 SIRRARQKAMDAIKK--LNSSLPKDDIKRLEKE 468
S+R AR+ A+DAIKK P+D K E E
Sbjct: 128 SVRNARRDAIDAIKKSVKTDGTPEDVAKDAEAE 160
[65][TOP]
>UniRef100_B5Y1J9 Ribosome-recycling factor n=4 Tax=Klebsiella pneumoniae
RepID=RRF_KLEP3
Length = 185
Score = 112 bits (279), Expect = 2e-23
Identities = 59/155 (38%), Positives = 93/155 (60%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A +ME + A ++SK+RTGRASP +LD I+VE G PL ++A V+V D +T
Sbjct: 5 IRKDAEIRMEKCVEAFKNQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L +N +D +E AI++S LGLNP + G + +PPLT+E + + K+V E A
Sbjct: 65 LKINVFDRSMSAAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R ++R R+ A D +K L + +DD +R + +
Sbjct: 125 RVAVRNVRRDANDKVKALLKEKEISEDDDRRSQDD 159
[66][TOP]
>UniRef100_Q9RU82 Ribosome-recycling factor n=1 Tax=Deinococcus radiodurans
RepID=RRF_DEIRA
Length = 183
Score = 112 bits (279), Expect = 2e-23
Identities = 60/154 (38%), Positives = 95/154 (61%)
Frame = +1
Query: 7 TIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPK 186
+I+A+ +M AI A LS LRTGRA+PG+L I+V+ G ++P+ ++A ++ DP+
Sbjct: 6 SIQADTREKMNKAIEAFENNLSVLRTGRANPGILKKIVVDYYGSQMPIDQVASITTPDPR 65
Query: 187 TLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCED 366
TL + P+D L +E AI S LGLNP G+ + ++P LT+E + + K ED
Sbjct: 66 TLVITPWDRGALNPIEKAIRDSDLGLNPNNKGDTIFISLPMLTEERRKDLVKNAKNYAED 125
Query: 367 ARQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
AR ++R R+ A+D +KK+ L +D+IKR E +
Sbjct: 126 ARIAVRNLRKHALDEVKKV-EGLGEDEIKRGEAD 158
[67][TOP]
>UniRef100_C0ZF63 Ribosome-recycling factor n=1 Tax=Brevibacillus brevis NBRC 100599
RepID=RRF_BREBN
Length = 185
Score = 112 bits (279), Expect = 2e-23
Identities = 59/152 (38%), Positives = 95/152 (62%), Gaps = 2/152 (1%)
Frame = +1
Query: 7 TIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPK 186
T+ + +M AI+AL +LS LR GRA+P MLD + V+ G P+ ++A +SV +P+
Sbjct: 4 TVLNDMEDRMNKAINALKRDLSSLRAGRANPAMLDRVTVDYYGTPTPISQLANISVPEPR 63
Query: 187 TLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCED 366
L++ P+D LK+++ A+ S LG++P DG + IPPLT+E + + KL K E+
Sbjct: 64 MLTIQPWDKTALKEIDRALQQSDLGISPSNDGVIIRLIIPPLTEERRKELVKLAGKGGEE 123
Query: 367 ARQSIRRARQKAMDAIKKLN--SSLPKDDIKR 456
A+ +IR R+ A D IKKL +++ +DD +R
Sbjct: 124 AKVAIRNIRRDANDEIKKLEKAATISEDDSRR 155
[68][TOP]
>UniRef100_Q7WJ91 Ribosome-recycling factor n=3 Tax=Bordetella RepID=RRF_BORBR
Length = 186
Score = 112 bits (279), Expect = 2e-23
Identities = 57/155 (36%), Positives = 98/155 (63%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A ++M ++ L L+K+RTGRA G+LDH+ VE G +P+ ++A V+++D +T
Sbjct: 6 IRKSAETRMAKSLETLKASLAKIRTGRAHTGILDHVQVEYYGSPVPISQVANVNLVDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+SV PY+ +E AI S LGLNP + GE + +P LT+E + + K+V EDA
Sbjct: 66 ISVQPYEKSMAGPIEKAIRESDLGLNPVSMGETIRVPMPALTEERRRDLTKVVKSEGEDA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ ++R R++A +A+KKL + + +DD +R + +
Sbjct: 126 KVAVRNLRREANEALKKLVKDKEISEDDERRAQDD 160
[69][TOP]
>UniRef100_UPI0000383E43 COG0233: Ribosome recycling factor n=1 Tax=Magnetospirillum
magnetotacticum MS-1 RepID=UPI0000383E43
Length = 173
Score = 111 bits (278), Expect = 2e-23
Identities = 58/147 (39%), Positives = 92/147 (62%), Gaps = 2/147 (1%)
Frame = +1
Query: 34 MEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYDP 213
M++A+ L E S LR+GRAS +LD ++VE G +PL + V V +P+ L+V +D
Sbjct: 1 MDSAVEVLKKEFSGLRSGRASVNLLDPVVVEAYGQTMPLSQCGTVGVPEPRMLTVQVWDK 60
Query: 214 QTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRAR 393
+K +E AI ++ LGLNP+ADG+ + IP L +E + + K+ K E AR S+R R
Sbjct: 61 SQVKAVEKAIANAGLGLNPQADGQMIRVPIPALNEERRKELQKVAGKYAEQARISVRNVR 120
Query: 394 QKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ MD++KK+ + + +D+IK+ EKE
Sbjct: 121 RDGMDSLKKMEKDGHISEDEIKKHEKE 147
[70][TOP]
>UniRef100_C8QFF2 Ribosome recycling factor n=1 Tax=Pantoea sp. At-9b
RepID=C8QFF2_9ENTR
Length = 216
Score = 111 bits (278), Expect = 2e-23
Identities = 61/155 (39%), Positives = 93/155 (60%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK +A ++M+ + A +SK+RTGRASP +LD I+VE G PL ++A V+V D +T
Sbjct: 36 IKKDAETRMDKCVEAFKNTISKVRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRT 95
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L +N +D +E AI++S LGLNP + G + +PPLT+E + + K+V E
Sbjct: 96 LKINVFDRSLGPAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLIKIVRGEAEQG 155
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R S+R R+ A D IK L + + +DD +R + E
Sbjct: 156 RVSVRNVRRDANDKIKALLKDKEISEDDERRAQDE 190
[71][TOP]
>UniRef100_B9GSN2 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GSN2_POPTR
Length = 286
Score = 111 bits (278), Expect = 2e-23
Identities = 62/155 (40%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A +ME I + + +RTGRA+P MLD I VE G + L IA +S D +
Sbjct: 106 IEDDAKGRMEKTIDTMRANFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASS 165
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L V PYD +LK +E AIVSS LGL P DGE + +IP LT E + ++K+V K E+
Sbjct: 166 LLVQPYDKSSLKAIEKAIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEG 225
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ ++R R+ A+ A +KL L +D++K L +
Sbjct: 226 KVALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSD 260
[72][TOP]
>UniRef100_Q2G8K7 Ribosome-recycling factor n=1 Tax=Novosphingobium aromaticivorans
DSM 12444 RepID=RRF_NOVAD
Length = 185
Score = 111 bits (278), Expect = 2e-23
Identities = 63/154 (40%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Frame = +1
Query: 13 KANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTL 192
KA+ +M+ A+ +L +LS LRTGRA+ +LD I+VE G +PL ++A VS +P+ L
Sbjct: 6 KADLERRMKGAVESLRGDLSGLRTGRANTALLDPIVVEVYGSHMPLAQVATVSAPEPRLL 65
Query: 193 SVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDAR 372
SV +D + +E AI S+ LGLNP +DG L IP LT+E + + KL +K E+AR
Sbjct: 66 SVQVWDKSNVTPVEKAIRSAGLGLNPISDGNTLRLPIPDLTEERRKELAKLASKYAENAR 125
Query: 373 QSIRRARQKAMDAIK--KLNSSLPKDDIKRLEKE 468
+IR R+ MDA+K + + +D+ KR E +
Sbjct: 126 IAIRNVRRDGMDALKADESKKEISEDERKRAETD 159
[73][TOP]
>UniRef100_B1XXJ2 Ribosome-recycling factor n=1 Tax=Leptothrix cholodnii SP-6
RepID=RRF_LEPCP
Length = 186
Score = 111 bits (278), Expect = 2e-23
Identities = 58/151 (38%), Positives = 96/151 (63%), Gaps = 2/151 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK NA ++M ++ A EL K+RTGRA PG+LD + V+ G +PL ++A V++ID +T
Sbjct: 6 IKKNAEAKMAKSVEAFKNELQKIRTGRAHPGILDQVHVDYYGSNLPLSQVANVTLIDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+SV P++ +++E AI S LGLNP + G+ + +P LT+E + + K+V + ED+
Sbjct: 66 ISVQPWEKSMAQKIEKAIRESDLGLNPSSMGDLIRVPMPALTEERRKELTKVVRHAGEDS 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKR 456
+ ++R R+ A D KKL + + +DD +R
Sbjct: 126 KVAVRNLRRDANDQAKKLLKDKLISEDDERR 156
[74][TOP]
>UniRef100_A4G4S4 Ribosome-recycling factor n=1 Tax=Herminiimonas arsenicoxydans
RepID=RRF_HERAR
Length = 186
Score = 111 bits (278), Expect = 2e-23
Identities = 60/154 (38%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Frame = +1
Query: 13 KANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTL 192
K A +M+ +I L +L+K+RTGRA G+LDH++VE G L ++A V++ID +T+
Sbjct: 7 KKTADQKMQKSIETLKADLAKVRTGRAHTGILDHVMVEYYGNPTNLTQVANVTLIDARTI 66
Query: 193 SVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDAR 372
V P++ + + +E AI + LGLNP GE + PPLT+E + M KLV EDA+
Sbjct: 67 GVQPFEKKMVAVVEKAIRDADLGLNPATQGEMIRVPTPPLTEERRKEMVKLVKSEAEDAK 126
Query: 373 QSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+IR R+ A + +KKL + + +DD +R + E
Sbjct: 127 IAIRNIRRDANETLKKLLKDKACSEDDERRAQDE 160
[75][TOP]
>UniRef100_A5G7W5 Ribosome-recycling factor n=1 Tax=Geobacter uraniireducens Rf4
RepID=RRF_GEOUR
Length = 185
Score = 111 bits (278), Expect = 2e-23
Identities = 58/152 (38%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = +1
Query: 19 NAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSV 198
N + M+ I AL E ++RTGRAS G+LD I V+ G P+ ++A ++V +P+T+++
Sbjct: 8 NMSTHMDKTIDALRKEYQRVRTGRASTGLLDEIKVDFYGTPSPINQVATLAVPEPRTITL 67
Query: 199 NPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQS 378
P+D + + +E AI+++ LGL P DG+ + IPPLT+E + + K + K EDA+ +
Sbjct: 68 QPWDAKMIPVIEKAIMNANLGLTPANDGKVIRLNIPPLTEERRKDIVKQLKKLAEDAKVA 127
Query: 379 IRRARQKAMDAIKK--LNSSLPKDDIKRLEKE 468
+R R+ A+D +KK + + +DD+KR EKE
Sbjct: 128 VRNIRRDAIDELKKQEKDKKISEDDLKRAEKE 159
[76][TOP]
>UniRef100_Q895K9 Ribosome-recycling factor n=1 Tax=Clostridium tetani
RepID=RRF_CLOTE
Length = 183
Score = 111 bits (278), Expect = 2e-23
Identities = 63/153 (41%), Positives = 90/153 (58%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I A +M A+ AL +L+ L+ GRA+P MLD I E G PL ++A +SV + +
Sbjct: 5 IMNTAEDKMSKALLALKKDLASLKAGRANPAMLDKIEAEYYGTMTPLSQLANISVPEARI 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L + P+D +LK +E AI+ S LGLNP DG + IP LT+E + + K V K ED
Sbjct: 65 LQIQPWDKSSLKAIEKAILVSDLGLNPNNDGTIIRLIIPELTEETRRNIVKTVKKYGEDT 124
Query: 370 RQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
+ +IR R+ D IK L S + +DDIK+ E+E
Sbjct: 125 KIAIRSVRRDGNDKIKDLKSDMSEDDIKKAEEE 157
[77][TOP]
>UniRef100_Q2JQI2 Ribosome recycling factor n=1 Tax=Synechococcus sp. JA-3-3Ab
RepID=Q2JQI2_SYNJA
Length = 182
Score = 111 bits (277), Expect = 3e-23
Identities = 59/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Frame = +1
Query: 34 MEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYDP 213
M A+ A + +RTGRA+ +LD + VE GV PL +A ++ D TL + P+DP
Sbjct: 10 MSKAVQATQRSFNTVRTGRANASLLDRVQVEYYGVPTPLKALASITTPDASTLLIQPFDP 69
Query: 214 QTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRAR 393
TL +E AIV+S LGL P DG+ + IPPLT+E + ++K V K E+ R SIR R
Sbjct: 70 STLAAIERAIVASDLGLTPSNDGKVVRLNIPPLTEERRKELSKQVAKLAEEGRVSIRNIR 129
Query: 394 QKAMDAIKK--LNSSLPKDDIKRLEKE 468
+ A+D+++K N + +D+ K L++E
Sbjct: 130 RDAIDSVRKREKNGEISEDESKSLQEE 156
[78][TOP]
>UniRef100_C2B0K0 Putative uncharacterized protein n=1 Tax=Citrobacter youngae ATCC
29220 RepID=C2B0K0_9ENTR
Length = 185
Score = 111 bits (277), Expect = 3e-23
Identities = 59/155 (38%), Positives = 94/155 (60%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A +M+ + A ++SK+RTGRASP +LD I+VE G PL ++A V+V D +T
Sbjct: 5 IRKDAEVRMDKCVEAFKNQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L +N +D +E AI++S LGLNP + G + +PPLT+E + + K+V E A
Sbjct: 65 LKINVFDRSMGPAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLTKIVRGEAEGA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R ++R R+ A D +K L + + +DD +R + E
Sbjct: 125 RVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDE 159
[79][TOP]
>UniRef100_C1XT36 Ribosome recycling factor n=1 Tax=Meiothermus silvanus DSM 9946
RepID=C1XT36_9DEIN
Length = 185
Score = 111 bits (277), Expect = 3e-23
Identities = 62/149 (41%), Positives = 90/149 (60%), Gaps = 2/149 (1%)
Frame = +1
Query: 28 SQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPY 207
+ M+ A+ AL LS LRTGRA+P +L I V+ G +P+ ++ ++ D +TL + +
Sbjct: 11 NHMQKALDALEHHLSGLRTGRANPAILKSIRVDYYGSLMPIEQLGTITAPDARTLVIQSW 70
Query: 208 DPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRR 387
D LK +E AI S LGLNP G+ L +IPPLT+E + + K V E+AR ++R
Sbjct: 71 DAGALKSIEKAIRDSDLGLNPNNKGDSLFISIPPLTEERRRELVKAVKHYAEEARVAVRN 130
Query: 388 ARQKAMDAIKKLNSS--LPKDDIKRLEKE 468
AR++A+D KKL L +DDIKR E E
Sbjct: 131 ARREAVDKAKKLGKEQHLSEDDIKRAEAE 159
[80][TOP]
>UniRef100_C6TCH7 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TCH7_SOYBN
Length = 261
Score = 111 bits (277), Expect = 3e-23
Identities = 61/155 (39%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A ++M+ I + T S +RTGRA+P MLD I VE G + L IA +S D +
Sbjct: 81 IEKDAKTRMDRTIDNVRTNFSSIRTGRANPSMLDKIQVEYYGSPVSLKSIAQISTPDASS 140
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L V PYD +LK +E AIVSS LG+ P DGE + +IP LT + + ++K+V K E+
Sbjct: 141 LLVQPYDKSSLKAIEKAIVSSDLGMTPNNDGELIRLSIPQLTSDRRKELSKIVAKQAEEG 200
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ ++R R+ A+ A KL L +D++K L +
Sbjct: 201 KVALRNIRRDALKAYDKLEKEKKLSEDNVKDLSSD 235
[81][TOP]
>UniRef100_A4S0B5 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S0B5_OSTLU
Length = 238
Score = 111 bits (277), Expect = 3e-23
Identities = 62/146 (42%), Positives = 90/146 (61%)
Frame = +1
Query: 28 SQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPY 207
S+ +AA+ AL +LS+LRT RAS GM+DHIIV+ G PL + ++ + +TLSV +
Sbjct: 68 SKFDAALHALDVDLSQLRTARASAGMIDHIIVDVYGEPTPLSHLGTITAPNAQTLSVTLF 127
Query: 208 DPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRR 387
DP T +E AIV+SPLG PK + LI IP +T++ + + KL +K E A+ + R
Sbjct: 128 DPSTKPSVEKAIVNSPLGFVPKESSDGLIVPIPAMTQDTRKEVCKLASKLGETAKIAARN 187
Query: 388 ARQKAMDAIKKLNSSLPKDDIKRLEK 465
R KA IK+ + + +DD KR EK
Sbjct: 188 IRHKAQKRIKR--AEMSEDDRKRAEK 211
[82][TOP]
>UniRef100_B1MZ62 Ribosome-recycling factor n=1 Tax=Leuconostoc citreum KM20
RepID=RRF_LEUCK
Length = 181
Score = 111 bits (277), Expect = 3e-23
Identities = 59/150 (39%), Positives = 93/150 (62%)
Frame = +1
Query: 19 NAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSV 198
+A S+M+ A AL EL+ +RTGRA+P +LD I VE G PL ++A +SV + + L +
Sbjct: 7 DAKSRMQGAQDALQRELTSIRTGRANPHILDRIEVEYYGAMTPLNQVASISVPEARVLLI 66
Query: 199 NPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQS 378
P+D L+++ AI S LGLNP +DG + IP +T+E + + K V E A+ S
Sbjct: 67 TPFDKTALEEIIRAINMSDLGLNPSSDGNIVRLMIPQMTEEGRKDLAKQVKAEAEKAKVS 126
Query: 379 IRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
+R R+ AMD++KK +P+DD+++ E +
Sbjct: 127 VRNVRRDAMDSVKK-EKEMPEDDVRKAEND 155
[83][TOP]
>UniRef100_B9M5C3 Ribosome-recycling factor n=1 Tax=Geobacter sp. FRC-32
RepID=RRF_GEOSF
Length = 185
Score = 111 bits (277), Expect = 3e-23
Identities = 57/149 (38%), Positives = 96/149 (64%), Gaps = 2/149 (1%)
Frame = +1
Query: 28 SQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPY 207
S M+ I +L E K+RTGRAS +LD I V+ G PL ++A ++V +P+T+++ P+
Sbjct: 11 SHMDKTIDSLRKEYQKVRTGRASTSLLDEIKVDFYGTLSPLNQVATLAVPEPRTITLQPW 70
Query: 208 DPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRR 387
D + + +E AI+++ LGL P DG+ + +PPLT+E + + K + K EDA+ ++R
Sbjct: 71 DAKMIPPIEKAIMNANLGLTPANDGKLIRLNLPPLTEERRKEIVKQLKKFAEDAKVAVRN 130
Query: 388 ARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R++A+D +KKL + +DD+KR EK+
Sbjct: 131 IRREAIDDLKKLEKEKKISEDDLKRAEKD 159
[84][TOP]
>UniRef100_B5EHV8 Ribosome-recycling factor n=1 Tax=Geobacter bemidjiensis Bem
RepID=RRF_GEOBB
Length = 185
Score = 111 bits (277), Expect = 3e-23
Identities = 56/147 (38%), Positives = 98/147 (66%), Gaps = 2/147 (1%)
Frame = +1
Query: 34 MEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYDP 213
M+ +I +L E K+RTGRAS +LD I V++ G PL ++A +++ + +T++++P+D
Sbjct: 13 MDKSIESLRKEYQKVRTGRASTSLLDDIKVDSYGTLSPLNQVATLAIPEARTITISPWDS 72
Query: 214 QTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRAR 393
+ + +E AI++S LGLNP DG+ + +PPLT+E + + K + + EDA+ ++R R
Sbjct: 73 KMIAPIEKAIMNSNLGLNPANDGKMIRLTLPPLTEERRKDIVKQLKRDAEDAKVALRNIR 132
Query: 394 QKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ A+D +KKL + S+ +D+ KR EKE
Sbjct: 133 RDAIDQLKKLEKDKSISEDEQKRAEKE 159
[85][TOP]
>UniRef100_C6BHM7 Ribosome recycling factor n=1 Tax=Ralstonia pickettii 12D
RepID=C6BHM7_RALP1
Length = 186
Score = 110 bits (276), Expect = 4e-23
Identities = 55/151 (36%), Positives = 98/151 (64%), Gaps = 2/151 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
+K NA +M+ +I AL T+L+K+RTGRA G+LDH+ V+ G +P+ ++A V+++D +T
Sbjct: 6 VKKNAEQKMQKSIDALKTDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANVTLVDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+ V P++ + ++ +E AI + LGLNP G+ + P LT+E + + K+V EDA
Sbjct: 66 IGVQPWEKKMVQAVEKAIREADLGLNPATMGDIIRVPTPALTEERRKELTKVVKGEGEDA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKR 456
+ ++R R+ A + +KKL + ++ +DD +R
Sbjct: 126 KVAVRNLRRDANEQLKKLVKDKAISEDDERR 156
[86][TOP]
>UniRef100_A8ALB7 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC
BAA-895 RepID=A8ALB7_CITK8
Length = 173
Score = 110 bits (276), Expect = 4e-23
Identities = 58/147 (39%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Frame = +1
Query: 34 MEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYDP 213
ME + A ++SK+RTGRASP +LD I+VE G PL ++A V+V D +TL +N +D
Sbjct: 1 MEKCVEAFKNQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDR 60
Query: 214 QTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRAR 393
+E AI++S LGLNP + G + +PPLT+E + + K+V E AR ++R R
Sbjct: 61 SMSPAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVR 120
Query: 394 QKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ A D +K L + + +DD +R + E
Sbjct: 121 RDANDKVKALLKDKEISEDDDRRSQDE 147
[87][TOP]
>UniRef100_Q67PB4 Ribosome-recycling factor n=1 Tax=Symbiobacterium thermophilum
RepID=RRF_SYMTH
Length = 185
Score = 110 bits (276), Expect = 4e-23
Identities = 57/152 (37%), Positives = 95/152 (62%), Gaps = 2/152 (1%)
Frame = +1
Query: 19 NAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSV 198
+A +M+ A+ EL+ +R RA+P +LD + VE G ++P+ +A + V DP+TL +
Sbjct: 8 DAEERMKKAVEVFRQELAGMRANRATPALLDKVRVEAYGSEVPVNNVATIEVPDPRTLVI 67
Query: 199 NPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQS 378
P+D +K +E AI +S LGLNP DG+ + +IPP+T+E + + K+V K E+ R +
Sbjct: 68 KPWDRSLIKAIERAINASDLGLNPTNDGQVIRLSIPPMTEERRRELVKVVAKRTEEQRVA 127
Query: 379 IRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
IR R+ A + IKKL + ++ +D+ KR + E
Sbjct: 128 IRNIRRDANEQIKKLEKDKAVSEDESKRAQDE 159
[88][TOP]
>UniRef100_Q1AW65 Ribosome-recycling factor n=1 Tax=Rubrobacter xylanophilus DSM 9941
RepID=RRF_RUBXD
Length = 186
Score = 110 bits (276), Expect = 4e-23
Identities = 57/153 (37%), Positives = 93/153 (60%), Gaps = 2/153 (1%)
Frame = +1
Query: 16 ANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLS 195
++A +M+ A+ A+ + + +RTGRA+P +LD I VE G ++P+ +A + +P+ L+
Sbjct: 8 SDAERRMKGALEAVRHQFATIRTGRANPALLDRIEVEAYGTRMPIKSVASIGAPEPRLLT 67
Query: 196 VNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQ 375
+ PYDP LK +E AI S LGLNP+ DG+ + IP LT+E + + +LV E+ R
Sbjct: 68 ITPYDPNLLKTIERAIRDSDLGLNPQNDGKIIRLPIPELTEERRRELIRLVRHMAEEGRV 127
Query: 376 SIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
S+R R+ M I++L + +DD +R E E
Sbjct: 128 SVRNVRRDEMHDIQRLRREGEISEDDERRAEAE 160
[89][TOP]
>UniRef100_B2UB09 Ribosome-recycling factor n=1 Tax=Ralstonia pickettii 12J
RepID=RRF_RALPJ
Length = 186
Score = 110 bits (276), Expect = 4e-23
Identities = 55/151 (36%), Positives = 98/151 (64%), Gaps = 2/151 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
+K NA +M+ +I AL T+L+K+RTGRA G+LDH+ V+ G +P+ ++A V+++D +T
Sbjct: 6 VKKNAEQKMQKSIEALKTDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANVTLVDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+ V P++ + ++ +E AI + LGLNP G+ + P LT+E + + K+V EDA
Sbjct: 66 IGVQPWEKKMVQAVEKAIREADLGLNPATMGDIIRVPTPALTEERRKELTKVVKGEGEDA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKR 456
+ ++R R+ A + +KKL + ++ +DD +R
Sbjct: 126 KVAVRNLRRDANEQLKKLVKDKAISEDDERR 156
[90][TOP]
>UniRef100_Q7N8P4 Ribosome-recycling factor n=1 Tax=Photorhabdus luminescens subsp.
laumondii RepID=RRF_PHOLL
Length = 185
Score = 110 bits (276), Expect = 4e-23
Identities = 61/155 (39%), Positives = 93/155 (60%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK +A +ME ++ AL ++SK+RTGRASP +LD IIVE G PL ++A V D +T
Sbjct: 5 IKKDAQDRMEKSVEALKNQISKVRTGRASPSLLDGIIVEYYGAPTPLRQLANVIAEDART 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L++ +D +E AI++S LGLNP + G + +PPLT+E + + K+V E
Sbjct: 65 LAITVFDRTMTPAIEKAIMASDLGLNPSSAGTTIRVPLPPLTEERRKDLIKVVRSEAEQG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R S+R R+ A D IK L + + +DD +R + +
Sbjct: 125 RVSVRNIRRDANDKIKALLKDKEISEDDERRAQDD 159
[91][TOP]
>UniRef100_B7X1L9 Ribosome recycling factor n=1 Tax=Comamonas testosteroni KF-1
RepID=B7X1L9_COMTE
Length = 186
Score = 110 bits (275), Expect = 5e-23
Identities = 60/155 (38%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK N ++M +I AL L+++RTGRA+P +LD I VE G +PL ++A VS++D +T
Sbjct: 6 IKKNTETKMGQSIEALKNNLARVRTGRANPALLDAIHVEYYGSMVPLSQVANVSLLDSRT 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+SV P++ ++E AI S LGLNP + G+ + +PP+++E + M KL E+
Sbjct: 66 ISVQPWEKNMAAKVEKAIRESDLGLNPASMGDLIRVPMPPMSEERRKEMTKLARNEGENG 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ +IR R+ A +++KKL + +DD KR E E
Sbjct: 126 KIAIRNLRRDANESVKKLVKDKEASEDDQKRSEAE 160
[92][TOP]
>UniRef100_UPI00019838B7 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI00019838B7
Length = 280
Score = 110 bits (274), Expect = 6e-23
Identities = 59/156 (37%), Positives = 93/156 (59%), Gaps = 2/156 (1%)
Frame = +1
Query: 7 TIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPK 186
+I+ + +ME I + T + +RTGRA+P +LD + VE G + L IA +S D
Sbjct: 99 SIEKDVKERMEKTIETVRTNFNSIRTGRANPAILDRVEVEYYGTPVSLKSIAQISTPDSA 158
Query: 187 TLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCED 366
+L V PYD +LK +E AIVSS LGL P DGE + ++P LT E + ++K+V K E+
Sbjct: 159 SLLVQPYDKSSLKVIEKAIVSSDLGLTPNNDGEVIRLSLPQLTSERRKELSKVVAKQTEE 218
Query: 367 ARQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ ++R R+ A+ A +KL + L +D++K L +
Sbjct: 219 GKVALRNIRRDALKAYEKLEKDKKLSEDNVKDLSSD 254
[93][TOP]
>UniRef100_UPI000038354A COG0233: Ribosome recycling factor n=1 Tax=Magnetospirillum
magnetotacticum MS-1 RepID=UPI000038354A
Length = 187
Score = 110 bits (274), Expect = 6e-23
Identities = 56/144 (38%), Positives = 92/144 (63%), Gaps = 2/144 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+M+ A+S+LS +L LRTGRA+P +LD I VE G +P+ ++A VSV +P+ LS++ +D
Sbjct: 14 RMQGAVSSLSKDLGSLRTGRATPSLLDPIQVEAYGASMPMAQVATVSVPEPRLLSISVWD 73
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
+ +E AI S LGLNP +G+ + IP + ++ + M K+ K E+AR ++R
Sbjct: 74 RSMVTNVEKAIRESDLGLNPMTEGQTIRLRIPEMNEQRRKEMVKVAHKYAEEARVAVRHV 133
Query: 391 RQKAMDAIKKL--NSSLPKDDIKR 456
R+ +D +KKL + ++ +DD KR
Sbjct: 134 RRDGLDILKKLEKDGAISEDDEKR 157
[94][TOP]
>UniRef100_B7FI72 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=B7FI72_MEDTR
Length = 262
Score = 110 bits (274), Expect = 6e-23
Identities = 59/156 (37%), Positives = 95/156 (60%), Gaps = 2/156 (1%)
Frame = +1
Query: 7 TIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPK 186
+I+ + S+ME + + T S +RTGRA+P MLD I VE G + L IA +S D
Sbjct: 81 SIENDVKSRMERTLDNVKTNFSSIRTGRATPSMLDKIEVEYYGSPVSLKTIAQISTPDAS 140
Query: 187 TLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCED 366
+L V+PYD +LK +E AIV+S +G+ P DGE + +IP LT + + + K+V+K E+
Sbjct: 141 SLLVSPYDKSSLKAIEKAIVNSDVGMTPNNDGEVIRLSIPQLTSDRRKELTKIVSKQVEE 200
Query: 367 ARQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ ++R R+ A+ A +KL + L +D++K L +
Sbjct: 201 GKVALRNIRRDALKAYEKLEKDKKLSEDNVKDLSSD 236
[95][TOP]
>UniRef100_Q2L159 Ribosome-recycling factor n=1 Tax=Bordetella avium 197N
RepID=RRF_BORA1
Length = 186
Score = 110 bits (274), Expect = 6e-23
Identities = 58/155 (37%), Positives = 98/155 (63%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A S+M ++ L LSK+RTGRA G+LDH+ VE G +P+ ++A ++++D +T
Sbjct: 6 IRNSAESRMSKSLDTLKVNLSKIRTGRAHAGILDHVQVEYYGSPVPVGQVANLNLVDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+SV PY+ +E AI S LGLNP + G+ + +P LT+E + + K+V EDA
Sbjct: 66 ISVQPYEKHMAGPIERAIRDSDLGLNPVSLGDTIRVPMPALTEERRRDLTKVVRSEGEDA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ ++R R++A +A+KKL + + +DD +R + E
Sbjct: 126 KVAVRNLRREANEALKKLVKDKIISEDDERRGQDE 160
[96][TOP]
>UniRef100_A4SQH9 Ribosome-recycling factor n=1 Tax=Aeromonas salmonicida subsp.
salmonicida A449 RepID=RRF_AERS4
Length = 185
Score = 110 bits (274), Expect = 6e-23
Identities = 59/155 (38%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK +A +M ++ +L T++SK+RTGRA P +LD I VE G PL ++A V D +T
Sbjct: 5 IKNDAKDRMAKSVESLKTQMSKIRTGRAHPSLLDGIQVEYYGAATPLKQLANVVAEDART 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
LS++ +D ++ +E AI++S LGLNP ++G+ L +PPLT+E + + K+V E A
Sbjct: 65 LSISIFDRSMIQAVEKAILTSDLGLNPSSNGQTLRVPLPPLTEERRRDLTKIVRAEAEGA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R ++R R+ A +K L + + +DD +R ++E
Sbjct: 125 RVAVRNIRRDANADLKALLKDKEISEDDDRRAQEE 159
[97][TOP]
>UniRef100_A0KHG6 Ribosome-recycling factor n=1 Tax=Aeromonas hydrophila subsp.
hydrophila ATCC 7966 RepID=RRF_AERHH
Length = 185
Score = 110 bits (274), Expect = 6e-23
Identities = 59/155 (38%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK +A +M ++ +L T++SK+RTGRA P +LD I VE G PL ++A V D +T
Sbjct: 5 IKNDAKDRMAKSVESLKTQMSKIRTGRAHPSLLDGIQVEYYGAATPLKQLANVVAEDART 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
LS++ +D ++ +E AI++S LGLNP ++G+ L +PPLT+E + + K+V E A
Sbjct: 65 LSISIFDRSMIQAVEKAILTSDLGLNPSSNGQTLRVPLPPLTEERRRDLTKIVRAEAEGA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R ++R R+ A +K L + + +DD +R ++E
Sbjct: 125 RVAVRNIRRDANADLKALLKDKEISEDDDRRAQEE 159
[98][TOP]
>UniRef100_C8R2B2 Ribosome recycling factor n=1 Tax=Desulfurivibrio alkaliphilus AHT2
RepID=C8R2B2_9DELT
Length = 184
Score = 109 bits (273), Expect = 8e-23
Identities = 58/148 (39%), Positives = 95/148 (64%), Gaps = 2/148 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+ME +I A ELS++RTGRAS +LD + VE G +PL ++A +++ + + + + P+D
Sbjct: 11 KMEKSIEAYRRELSRIRTGRASLSLLDGVKVEAYGSSMPLNQVATLTIPESRMIVIQPWD 70
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
Q + +E AI +S +GL P +DG+ + IP LT+E + M K V K E+ R ++R +
Sbjct: 71 AQQVSAIEKAIHASDIGLTPNSDGKVIRLMIPQLTEERRKEMVKQVKKISEEYRVAVRNS 130
Query: 391 RQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R++A+D +KKL + LP+DD RL+ E
Sbjct: 131 RREAIDTLKKLKNDKQLPEDDFFRLQDE 158
[99][TOP]
>UniRef100_C7H140 Ribosome recycling factor n=1 Tax=Eubacterium saphenum ATCC 49989
RepID=C7H140_9FIRM
Length = 190
Score = 109 bits (273), Expect = 8e-23
Identities = 57/141 (40%), Positives = 89/141 (63%), Gaps = 2/141 (1%)
Frame = +1
Query: 37 EAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYDPQ 216
E IS L+ EL+ +R GRA+P +LD I V+ G PL IA +SV DPK+L ++P+DP
Sbjct: 19 EKTISLLTGELNSVRAGRANPSLLDQIRVDYYGTPTPLKNIANISVPDPKSLMISPFDPS 78
Query: 217 TLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRARQ 396
+K++ AI S LG+NP DG+ + +P LT+E + + K+V + +DA+ +IR R+
Sbjct: 79 AIKEIIKAINESELGINPLDDGKNIRLKVPQLTEERRKEITKMVKQITDDAKIAIRNLRR 138
Query: 397 KAMDAIKKL--NSSLPKDDIK 453
A D +KK N + +D++K
Sbjct: 139 DANDHLKKAEKNGDISEDELK 159
[100][TOP]
>UniRef100_C1MCU1 Ribosome releasing factor n=1 Tax=Citrobacter sp. 30_2
RepID=C1MCU1_9ENTR
Length = 185
Score = 109 bits (273), Expect = 8e-23
Identities = 58/155 (37%), Positives = 93/155 (60%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A +M+ + A ++SK+RTGRASP +LD I+VE G PL ++A V+V D +T
Sbjct: 5 IRKDAEVRMDKCVEAFKNQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L +N +D +E AI++S LGLNP + G + +PPLT+E + + K+V E A
Sbjct: 65 LKINVFDRSMGPAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLTKIVRGEAEGA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R ++R R+ A D +K L + +DD +R + +
Sbjct: 125 RVAVRNVRRDANDKVKALLKEKEISEDDDRRSQDD 159
[101][TOP]
>UniRef100_C0UFP9 Ribosome recycling factor n=1 Tax=Gordonia bronchialis DSM 43247
RepID=C0UFP9_9ACTO
Length = 185
Score = 109 bits (273), Expect = 8e-23
Identities = 53/152 (34%), Positives = 93/152 (61%), Gaps = 2/152 (1%)
Frame = +1
Query: 19 NAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSV 198
+A +ME A+S ++ +RTGRA+P M + +++E G P+ ++A ++ +P+ + +
Sbjct: 8 DAEEKMEKAVSVAKDDMGSIRTGRANPAMFNKVVIEYYGAMTPVTQVASINTPEPRLVVI 67
Query: 199 NPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQS 378
PY+ TL+ +E AI +S LG+NP DG + A+P LT+E + + K EDA+ S
Sbjct: 68 KPYEASTLRDIETAIRNSDLGVNPTNDGNVIRVAVPQLTEERRRDLVKQAKGKGEDAKVS 127
Query: 379 IRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
IR R+KA+D +K++ + +D++ R EKE
Sbjct: 128 IRNIRRKAVDELKRIQKDGEAGEDEVTRAEKE 159
[102][TOP]
>UniRef100_Q8XZI8 Ribosome-recycling factor n=1 Tax=Ralstonia solanacearum
RepID=RRF_RALSO
Length = 186
Score = 109 bits (273), Expect = 8e-23
Identities = 56/155 (36%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK +A +M+ +I A +L+K+RTGRA G+LDH+ V+ G +P+ ++A + + D +T
Sbjct: 6 IKKSAEQKMQKSIDAFKADLAKVRTGRAHTGLLDHVQVDYYGSMVPISQVANLGLADART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+SV P++ + + +E AI + LGLNP GE + +PPLT+E + + K+V EDA
Sbjct: 66 ISVQPWEKKMVSAVERAIRDADLGLNPATMGEVIRVPMPPLTEERRKELTKVVKSEGEDA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ ++R R+ A + KKL + ++ +DD +R + E
Sbjct: 126 KVAVRNVRRDANEQFKKLVKDKAISEDDERRGQDE 160
[103][TOP]
>UniRef100_B1ZLC8 Ribosome-recycling factor n=1 Tax=Methylobacterium populi BJ001
RepID=RRF_METPB
Length = 187
Score = 109 bits (273), Expect = 8e-23
Identities = 56/144 (38%), Positives = 92/144 (63%), Gaps = 2/144 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+M+ A+S+LS +L LRTGRA+P +LD I VE G +P+ ++A VSV +P+ LS++ +D
Sbjct: 14 RMQGAVSSLSKDLGSLRTGRATPSLLDPIQVEAYGASMPMAQVATVSVPEPRLLSISVWD 73
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
+ +E AI S LGLNP +G+ + IP + ++ + M K+ K E+AR ++R
Sbjct: 74 RSMVTNVEKAIRESDLGLNPMTEGQTIRLRIPEMNEQRRKEMVKVAHKYTEEARVAVRHV 133
Query: 391 RQKAMDAIKKL--NSSLPKDDIKR 456
R+ +D +KKL + ++ +DD KR
Sbjct: 134 RRDGLDILKKLEKDGAISEDDEKR 157
[104][TOP]
>UniRef100_Q24UG0 Ribosome-recycling factor n=1 Tax=Desulfitobacterium hafniense Y51
RepID=RRF_DESHY
Length = 185
Score = 109 bits (273), Expect = 8e-23
Identities = 58/151 (38%), Positives = 92/151 (60%), Gaps = 2/151 (1%)
Frame = +1
Query: 22 AVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVN 201
A +M A+ AL E + +R GRA+P MLD I VE G + P+ ++A +SV +P+ L++
Sbjct: 9 AEDRMVKAVEALKREYATIRAGRANPNMLDKITVEYYGTQTPVNQLANISVPEPRMLTIQ 68
Query: 202 PYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSI 381
P+D +L +E AI+ S LGLNP +DG + IP LT E + K V K ED+R ++
Sbjct: 69 PWDKSSLPMIEKAILKSDLGLNPSSDGTVIRLLIPQLTAERRTEIVKTVKKKAEDSRVAV 128
Query: 382 RRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R R+ + D +KKL + + +D++KR + +
Sbjct: 129 RNIRRDSNDELKKLEKDHTASEDEVKRAQDD 159
[105][TOP]
>UniRef100_B8FRG2 Ribosome-recycling factor n=1 Tax=Desulfitobacterium hafniense
DCB-2 RepID=RRF_DESHD
Length = 185
Score = 109 bits (273), Expect = 8e-23
Identities = 58/151 (38%), Positives = 92/151 (60%), Gaps = 2/151 (1%)
Frame = +1
Query: 22 AVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVN 201
A +M A+ AL E + +R GRA+P MLD I VE G + P+ ++A +SV +P+ L++
Sbjct: 9 AEDRMVKAVEALKREYATIRAGRANPNMLDKITVEYYGTQTPVNQLANISVPEPRMLTIQ 68
Query: 202 PYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSI 381
P+D +L +E AI+ S LGLNP +DG + IP LT E + K V K ED+R ++
Sbjct: 69 PWDKSSLPMIEKAILKSDLGLNPSSDGTVIRLLIPQLTAERRTEIVKTVKKKAEDSRVAV 128
Query: 382 RRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R R+ + D +KKL + + +D++KR + +
Sbjct: 129 RNIRRDSNDELKKLEKDHTASEDEVKRAQDD 159
[106][TOP]
>UniRef100_Q1IZI9 Ribosome-recycling factor n=1 Tax=Deinococcus geothermalis DSM
11300 RepID=RRF_DEIGD
Length = 183
Score = 109 bits (273), Expect = 8e-23
Identities = 61/153 (39%), Positives = 93/153 (60%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+A+A +M AI AL LS LRTGRA+PG+L ++VE G +P+ ++A ++ D +T
Sbjct: 7 IQADARERMGKAIEALENNLSVLRTGRANPGILKKVMVEYYGSSMPIDQVASITTPDART 66
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L + P+D L +E AI S LGLNP G+ + ++P LT+E + + K E+A
Sbjct: 67 LVITPWDRGALNPIEKAIRDSDLGLNPNNKGDTIFISLPMLTEERRKDLVKNAKNYAEEA 126
Query: 370 RQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
R +IR R+ A+D +KK+ + D+IKR E E
Sbjct: 127 RVAIRSIRKHALDEVKKV-EGVGDDEIKRAEAE 158
[107][TOP]
>UniRef100_A8I468 Ribosome-recycling factor n=1 Tax=Azorhizobium caulinodans ORS 571
RepID=RRF_AZOC5
Length = 186
Score = 109 bits (273), Expect = 8e-23
Identities = 61/153 (39%), Positives = 93/153 (60%), Gaps = 2/153 (1%)
Frame = +1
Query: 16 ANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLS 195
A+ +M A+++L EL LRTGRAS +L+ I V+ G +PL ++A VSV +P+ LS
Sbjct: 8 ADIKRRMAGAVTSLKQELGGLRTGRASASLLEPITVDAYGANMPLAQVATVSVPEPRLLS 67
Query: 196 VNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQ 375
V +D + +E AI S LGLNP +G+ L IP L +E + + K+ K E AR
Sbjct: 68 VQVWDRGMVNAVEKAIRDSNLGLNPNTEGQTLRIRIPELNEERRKELVKVAHKYAEAARV 127
Query: 376 SIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
++R R+ MD +KKL +S++ DD++RL K+
Sbjct: 128 AVRHVRRDGMDLLKKLEKDSAISSDDMERLSKD 160
[108][TOP]
>UniRef100_C9XWA5 Ribosome-recycling factor n=1 Tax=Cronobacter turicensis
RepID=C9XWA5_9ENTR
Length = 185
Score = 109 bits (272), Expect = 1e-22
Identities = 59/155 (38%), Positives = 95/155 (61%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A +M+ + A T++SK+RTGRASP +LD I+VE G PL ++A V+V D +T
Sbjct: 5 IRKDAEVRMDKCVEAFKTQISKVRTGRASPSLLDGIVVEYYGTPTPLRQLANVTVEDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L +N +D +E AI++S LGLNP + G + +PPLT+E + + K+V E A
Sbjct: 65 LKINVFDRSMSPAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLIKVVRGEAEQA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R +IR R+ A D +K L + + +D+ +R + +
Sbjct: 125 RVAIRNVRRDANDKVKALLKDKEIGEDEDRRSQDD 159
[109][TOP]
>UniRef100_C7HBX9 Ribosome recycling factor n=1 Tax=Clostridium thermocellum DSM 2360
RepID=C7HBX9_CLOTM
Length = 183
Score = 109 bits (272), Expect = 1e-22
Identities = 55/152 (36%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Frame = +1
Query: 19 NAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSV 198
N +M+ +S L EL+ +R GRA+ +LD I V+ GV P+ ++ +SV +P+ + +
Sbjct: 6 NIEEKMKKTVSVLKDELNTVRAGRANAAILDRITVDYYGVPTPINQLGTISVPEPRVIVI 65
Query: 199 NPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQS 378
P+D Q LK++E I S +G+NP DG+ + PPLT+E + + KL K EDA+ +
Sbjct: 66 QPWDAQILKEIEKEIQKSDIGINPNNDGKVIRLVFPPLTEERRKELTKLAKKYGEDAKVA 125
Query: 379 IRRARQKAMDAIK--KLNSSLPKDDIKRLEKE 468
IR R+ ++ +K K N + +DD+K EK+
Sbjct: 126 IRSIRRDGIEKMKAMKKNGEITEDDLKSAEKD 157
[110][TOP]
>UniRef100_C0GIU5 Ribosome recycling factor n=1 Tax=Dethiobacter alkaliphilus AHT 1
RepID=C0GIU5_9FIRM
Length = 185
Score = 109 bits (272), Expect = 1e-22
Identities = 56/156 (35%), Positives = 99/156 (63%), Gaps = 2/156 (1%)
Frame = +1
Query: 7 TIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPK 186
++ ++A +ME A+SAL +L+ LR GRA+P +LD I+V+ G +P+ ++A VS +P+
Sbjct: 4 SVYSDAQERMEKAVSALKRDLATLRAGRATPSLLDKIVVDYYGSSMPINQLANVSTPEPR 63
Query: 187 TLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCED 366
L + P+D + ++E AI+ S LGL P +DG + AIP LT+E + + K+ K ED
Sbjct: 64 LLVIQPWDKNAVAEVERAILKSDLGLTPVSDGSIIRLAIPQLTEERRKELVKVSKKKAED 123
Query: 367 ARQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R SIR R+ A + +K+L ++ + +D++ + + +
Sbjct: 124 GRVSIRNIRRDANEDLKRLEKDNEITEDELHKAQDD 159
[111][TOP]
>UniRef100_B8GQ53 Ribosome-recycling factor n=1 Tax=Thioalkalivibrio sp. HL-EbGR7
RepID=RRF_THISH
Length = 185
Score = 109 bits (272), Expect = 1e-22
Identities = 59/156 (37%), Positives = 100/156 (64%), Gaps = 2/156 (1%)
Frame = +1
Query: 7 TIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPK 186
+IK +A ++M +I +L EL+K+RTGRA +LDH++VE G +P+ ++A V+V D +
Sbjct: 4 SIKKDAKARMGKSIESLRNELAKIRTGRAHTSLLDHVMVEYYGSDVPISQVANVNVEDAR 63
Query: 187 TLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCED 366
TL+V P++ + ++E AI++S LGLNP + G + +P LT+E + + K+V E+
Sbjct: 64 TLTVTPWEKTMVSKVEKAIMTSDLGLNPSSMGTVIRVPMPALTEERRRDLVKVVRGEAEN 123
Query: 367 ARQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
AR +IR R+ A +A+K L + +DD +R + E
Sbjct: 124 ARVAIRNIRRDANNALKALVKGKEISEDDERRAQDE 159
[112][TOP]
>UniRef100_B7KZH3 Ribosome-recycling factor n=4 Tax=Methylobacterium extorquens group
RepID=RRF_METC4
Length = 187
Score = 109 bits (272), Expect = 1e-22
Identities = 57/148 (38%), Positives = 93/148 (62%), Gaps = 2/148 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+M+ A+S+LS +L LRTGRA+P +LD I VE G +P+ ++A VSV +P+ LS++ +D
Sbjct: 14 RMQGAVSSLSKDLGSLRTGRATPSLLDPIQVEAYGSSMPMAQVATVSVPEPRLLSISVWD 73
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
+ +E AI S LGLNP +G+ + IP + ++ + M K+ K E+AR ++R
Sbjct: 74 RSMVTNVEKAIRESDLGLNPMTEGQTIRLRIPEMNEQRRKEMVKVAHKYTEEARVAVRHV 133
Query: 391 RQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R+ +D +KKL + ++ +DD KR E
Sbjct: 134 RRDGLDILKKLEKDGAISQDDEKRQAAE 161
[113][TOP]
>UniRef100_C1CVP1 Ribosome-recycling factor n=1 Tax=Deinococcus deserti VCD115
RepID=RRF_DEIDV
Length = 183
Score = 109 bits (272), Expect = 1e-22
Identities = 61/154 (39%), Positives = 95/154 (61%)
Frame = +1
Query: 7 TIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPK 186
+I+A+A +M AI AL + LS LRTGRA+PG+L +IV+ G +P+ ++A ++ D +
Sbjct: 6 SIQADARERMGKAIEALESNLSVLRTGRANPGILKKVIVDYYGSTMPIDQVASITTPDAR 65
Query: 187 TLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCED 366
TL + P+D L +E AI S LGLNP G+ + ++P LT+E + + K ED
Sbjct: 66 TLVITPWDRGALGPIEKAIRDSDLGLNPNNKGDTIFISLPMLTEERRKDLVKNAKNYAED 125
Query: 367 ARQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
AR ++R R+ A+D +KK+ + D+IKR E E
Sbjct: 126 ARIAVRNIRKHALDEVKKV-EGVGDDEIKRGEAE 158
[114][TOP]
>UniRef100_A9INV3 Ribosome-recycling factor n=1 Tax=Bordetella petrii DSM 12804
RepID=RRF_BORPD
Length = 186
Score = 109 bits (272), Expect = 1e-22
Identities = 56/155 (36%), Positives = 98/155 (63%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A ++M ++ L LSK+RTGRA G+LDH+ VE G +P+ ++A V+++D +T
Sbjct: 6 IRKSAETRMAKSLDTLKVNLSKIRTGRAHTGILDHVQVEYYGSPVPVSQVANVNLVDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+SV PY+ +E AI S LGLNP + G+ + +P LT+E + + K+V EDA
Sbjct: 66 ISVQPYEKPMAAAIEKAIRESDLGLNPMSLGDSIRVPMPALTEERRRDLTKVVKGEGEDA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ ++R R++A +++KKL + + +DD +R + +
Sbjct: 126 KIAVRNLRREANESLKKLVKDKEISEDDERRAQDD 160
[115][TOP]
>UniRef100_Q0VQF4 Ribosome-recycling factor n=1 Tax=Alcanivorax borkumensis SK2
RepID=RRF_ALCBS
Length = 185
Score = 109 bits (272), Expect = 1e-22
Identities = 57/155 (36%), Positives = 98/155 (63%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+++A S+M+ ++ AL T + ++RTGRA P +LD+I +E G + PL ++ +SV + +T
Sbjct: 5 IRSDAQSRMKKSLEALDTAMKRVRTGRAHPSLLDNITIEYYGAETPLNQMGNISVEEGRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L+++P+D + Q+E AI+ S LGLNP G + +PPLT+E + + K+V E A
Sbjct: 65 LTISPFDKSLIPQIERAILMSDLGLNPSTSGTLIRLPLPPLTEETRRDLVKVVRAEAEQA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R SIR R+ A +K+L + +D+ +R E++
Sbjct: 125 RVSIRNIRRDANSDLKELLKEKEISEDEQRRGEEQ 159
[116][TOP]
>UniRef100_Q2RU06 Ribosome recycling factor n=1 Tax=Rhodospirillum rubrum ATCC 11170
RepID=Q2RU06_RHORT
Length = 191
Score = 108 bits (271), Expect = 1e-22
Identities = 57/156 (36%), Positives = 94/156 (60%), Gaps = 2/156 (1%)
Frame = +1
Query: 7 TIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPK 186
T+KA+ +M+ A+ L + + LRTGRAS +LD ++VE G +PL ++A VSV +P+
Sbjct: 10 TLKADLRHRMDTAVEVLRKDFAGLRTGRASTSLLDSVMVEAYGQAMPLAQVATVSVPEPR 69
Query: 187 TLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCED 366
+SV +D K ++ AI + LGLNP +DG+ + IPPL +E + K+ K E
Sbjct: 70 MISVQVWDRGMAKAVDKAIRDAGLGLNPASDGQLIRVPIPPLNEERRTELTKVAGKYAEQ 129
Query: 367 ARQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R ++R R+ MD +KK+ +S++ +D+ K+ E
Sbjct: 130 TRVAVRNVRRDGMDQLKKMEKDSAISQDEHKKFGAE 165
[117][TOP]
>UniRef100_C6PI98 Ribosome recycling factor n=2 Tax=Thermoanaerobacter
RepID=C6PI98_9THEO
Length = 184
Score = 108 bits (271), Expect = 1e-22
Identities = 55/148 (37%), Positives = 93/148 (62%), Gaps = 2/148 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+M+ ++S L +EL+ +R GRA+P +LD I+V+ G PL R+A ++ + + L V P+D
Sbjct: 11 KMQKSLSVLKSELAAIRAGRANPALLDRIMVDYYGTPTPLNRLATITAPEARVLVVQPWD 70
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
+ +E AI S LG+NP +DG+ L P LT+E + + KLV K E+A+ ++R+
Sbjct: 71 VSKISDIEKAIQKSDLGINPVSDGKVLRLVFPELTEERRKELVKLVYKKAEEAKVAVRQI 130
Query: 391 RQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R+ A D +KK+ N + +D+ K+ E+E
Sbjct: 131 RRDANDTVKKMEKNGEISEDERKKREEE 158
[118][TOP]
>UniRef100_C6IVZ3 Ribosome recycling factor n=1 Tax=Paenibacillus sp. oral taxon 786
str. D14 RepID=C6IVZ3_9BACL
Length = 184
Score = 108 bits (271), Expect = 1e-22
Identities = 62/154 (40%), Positives = 90/154 (58%)
Frame = +1
Query: 7 TIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPK 186
TIK +A +ME AI AL +LS LR GRA+P +LD I V+ G P+ ++A ++ D +
Sbjct: 4 TIKKHAEERMEKAIQALRRDLSTLRAGRATPSLLDRIQVDYYGSPTPINQLANINTPDSR 63
Query: 187 TLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCED 366
TL + P+D +L ++E AI S LGL P DG + IP LT+E + K+ K E+
Sbjct: 64 TLLIQPWDKSSLSEIERAIQKSDLGLTPANDGSSIRLTIPALTEERRIELVKMTKKFGEE 123
Query: 367 ARQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
A+ +IR R+ A D IKKL + +D R +E
Sbjct: 124 AKVAIRNIRRDANDDIKKLEKTDISEDESRRHQE 157
[119][TOP]
>UniRef100_B4FLS7 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FLS7_MAIZE
Length = 266
Score = 108 bits (271), Expect = 1e-22
Identities = 61/155 (39%), Positives = 88/155 (56%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ A +ME AI + T + +RTGRASP MLD I VE G + L IA +S D +
Sbjct: 86 IEDQAKEKMEKAIETVQTNFNTVRTGRASPAMLDRIEVEYYGTPVNLKSIAQISTPDATS 145
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L + PYD +LK +E IV++ LG+ P DGE + +PPLT + + + K V K ED
Sbjct: 146 LLIQPYDKSSLKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKELAKTVAKLAEDG 205
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ +IR R+ A+ A KL L +D++K L +
Sbjct: 206 KVAIRNIRRDAIKAYDKLQKEKKLSEDNVKDLSAD 240
[120][TOP]
>UniRef100_Q8RA24 Ribosome-recycling factor n=2 Tax=Thermoanaerobacteraceae
RepID=RRF_THETN
Length = 184
Score = 108 bits (271), Expect = 1e-22
Identities = 56/148 (37%), Positives = 93/148 (62%), Gaps = 2/148 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+M+ ++ L +EL+ +R GRA+P +LD I V G PL R+A ++ +P+ L V P+D
Sbjct: 11 RMKKTLNVLKSELAAIRAGRANPALLDRITVNYYGTPTPLNRLATITAPEPRVLVVQPWD 70
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
+ ++E AI S LG+NP +DG+ L +P LT+E + + KLV K E+AR ++R+
Sbjct: 71 VSQIGEIEKAIQKSDLGINPVSDGKVLRLVLPELTEERRKELVKLVHKKAEEARIAVRQI 130
Query: 391 RQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R+ A D +KK+ + + +D+ KR E+E
Sbjct: 131 RRDANDLVKKMEKDGEISEDERKRREEE 158
[121][TOP]
>UniRef100_Q2JHW2 Ribosome-recycling factor n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13)
RepID=RRF_SYNJB
Length = 182
Score = 108 bits (271), Expect = 1e-22
Identities = 59/147 (40%), Positives = 87/147 (59%), Gaps = 2/147 (1%)
Frame = +1
Query: 34 MEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYDP 213
M A+ A + +RTGRA+ +LD I VE GV PL +A ++ D TL + P+DP
Sbjct: 10 MNKAVQATQRSFNTVRTGRANSSLLDRIQVEYYGVPTPLKALASLTTPDSSTLLIQPFDP 69
Query: 214 QTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRAR 393
TL +E AIV+S LGL P DG+ + IPPLT+E + ++K V K E+ R SIR R
Sbjct: 70 STLAAIERAIVASDLGLTPSNDGKVVRLTIPPLTEERRKELSKQVAKLAEEGRVSIRNIR 129
Query: 394 QKAMDAIKK--LNSSLPKDDIKRLEKE 468
+ +D+++K N L +D+ K L+ +
Sbjct: 130 RDGIDSVRKREKNGELSEDESKSLQDD 156
[122][TOP]
>UniRef100_A9GGK7 Ribosome-recycling factor n=1 Tax=Sorangium cellulosum 'So ce 56'
RepID=RRF_SORC5
Length = 185
Score = 108 bits (271), Expect = 1e-22
Identities = 61/147 (41%), Positives = 93/147 (63%), Gaps = 2/147 (1%)
Frame = +1
Query: 34 MEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYDP 213
+E AI AL +L+K+RTGRA+ MLD I V+ GV P+V++A VSV +P+ +SV P++
Sbjct: 13 IEKAIEALRRDLAKVRTGRANAAMLDGIRVDYYGVPTPIVQMATVSVPEPRLISVKPWEK 72
Query: 214 QTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRAR 393
+K +E AI S LGLNP+ D + + IPPLT+E + M KL K+ ED + +IR+ R
Sbjct: 73 NQVKAIEKAIRESDLGLNPQVDADLIRLPIPPLTEERRREMVKLTKKNGEDCKVAIRKHR 132
Query: 394 QKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ A + I L + + D+ R +K+
Sbjct: 133 RDANEMIDSLEKDGDVSGDEADRAKKK 159
[123][TOP]
>UniRef100_Q2JWE8 Ribosome recycling factor n=1 Tax=Synechococcus sp. JA-3-3Ab
RepID=Q2JWE8_SYNJA
Length = 182
Score = 108 bits (270), Expect = 2e-22
Identities = 59/145 (40%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Frame = +1
Query: 34 MEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYDP 213
M A+ A + +RTGRA+ +LD I VE GV PL +A ++ D TL + P+DP
Sbjct: 10 MNKAVQATQRSFNTVRTGRANSSLLDRIQVEYYGVPTPLKALASLTTPDSSTLLIQPFDP 69
Query: 214 QTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRAR 393
TL +E AIV+S LGL P DG+ + IPPLT+E + ++K V K E+ R SIR R
Sbjct: 70 STLAAIERAIVASDLGLTPSNDGKVVRLTIPPLTEERRKELSKQVAKLAEEGRVSIRNIR 129
Query: 394 QKAMDAIKK--LNSSLPKDDIKRLE 462
+ +D+++K N L +D+ K L+
Sbjct: 130 RDGIDSVRKREKNGELSEDESKSLQ 154
[124][TOP]
>UniRef100_C6XDM8 Ribosome recycling factor n=1 Tax=Methylovorus sp. SIP3-4
RepID=C6XDM8_METSD
Length = 185
Score = 108 bits (270), Expect = 2e-22
Identities = 55/155 (35%), Positives = 99/155 (63%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
+K NA +M+ ++ +L ++L K+RTGRA G+LDH++VE G + + ++A V++ D +T
Sbjct: 5 VKKNAEQKMQKSLESLKSDLGKVRTGRAHTGLLDHVMVEYYGSMVAVNQVANVTLGDART 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
++V PY+ + ++E AI LGLNP +G+ + +P LT+E + + K+V E+A
Sbjct: 65 INVQPYEKNMVAKIEKAIRDGDLGLNPATNGDVIRVPMPMLTEERRRDLIKVVRTEGENA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ +IR R+ A D +KKL + + +DD +R++ E
Sbjct: 125 KVAIRNVRRDANDQLKKLTKDKEISEDDERRMQDE 159
[125][TOP]
>UniRef100_C2MD62 Ribosome recycling factor n=1 Tax=Porphyromonas uenonis 60-3
RepID=C2MD62_9PORP
Length = 186
Score = 108 bits (270), Expect = 2e-22
Identities = 59/151 (39%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Frame = +1
Query: 22 AVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVN 201
A M AI L +L ++R G+A+P +LD I VE G +PL ++A V+V D +TL++
Sbjct: 10 AEQSMLKAIEFLQDKLDRIRAGKANPVLLDDITVEAYGAPMPLNQVATVTVPDARTLAIT 69
Query: 202 PYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSI 381
P+D + +K +E I+ S LG+ P +GE + +PPLT+E + + K E+A+ SI
Sbjct: 70 PWDKKLIKDIEKGILDSSLGITPTNNGEMIRITMPPLTEERRKELVKQSKAESEEAKISI 129
Query: 382 RRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R AR+ A+DA KK LP+D IK+ E +
Sbjct: 130 RNARRDAIDAAKKAVKAEDLPEDTIKQTEND 160
[126][TOP]
>UniRef100_A8GIE3 Ribosome-recycling factor n=1 Tax=Serratia proteamaculans 568
RepID=RRF_SERP5
Length = 185
Score = 108 bits (270), Expect = 2e-22
Identities = 58/155 (37%), Positives = 94/155 (60%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A S+ME ++ A ++SK+RTGRASP +LD I+VE G PL ++A V+V D +T
Sbjct: 5 IRKDADSRMEKSVEAFKNQISKIRTGRASPSILDGIMVEYYGASTPLRQLASVTVEDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L +N +D +E AI+SS LGLNP + G + +P LT+E + + K+V E
Sbjct: 65 LKINVFDRSISAAVEKAIMSSDLGLNPSSAGSDIRVPLPALTEERRKDLIKIVRNEAEQG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R ++R R+ A D +K L + + +D+ +R + +
Sbjct: 125 RVAVRNVRRDANDKVKALLKDKEISEDEDRRSQDD 159
[127][TOP]
>UniRef100_Q1H142 Ribosome-recycling factor n=1 Tax=Methylobacillus flagellatus KT
RepID=RRF_METFK
Length = 185
Score = 108 bits (270), Expect = 2e-22
Identities = 59/155 (38%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
+K A +M+ +I AL +LSK+RTGRA G+LDH+ VE G + + ++A VS+ D +T
Sbjct: 5 VKNTAEQKMQKSIEALKADLSKVRTGRAHTGLLDHVQVEYYGSMVAINQVASVSLGDART 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L+V Y+ ++E AI + LGLNP +G+ + +P LT+E + + K+V E+A
Sbjct: 65 LNVQAYEKNMTPKVEKAIRDADLGLNPATNGDIIRVPMPMLTEERRRDLVKVVRSEAENA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ +IR R+ A DA+KKL + + +DD +R + E
Sbjct: 125 KVAIRNVRRDANDALKKLVKDKEISEDDERRAQDE 159
[128][TOP]
>UniRef100_Q049U5 Ribosome-recycling factor n=1 Tax=Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365 RepID=RRF_LACDB
Length = 185
Score = 108 bits (270), Expect = 2e-22
Identities = 59/153 (38%), Positives = 93/153 (60%), Gaps = 2/153 (1%)
Frame = +1
Query: 16 ANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLS 195
A A M +I + L+ +R G A+ +LD ++VE GV PLV++A +++ +P+ L
Sbjct: 7 AKAKRNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQMAGITIPEPRVLM 66
Query: 196 VNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQ 375
+ PYD +L +E+AI++S LGL P DG + IP LT E Q + K V K E+A+
Sbjct: 67 ITPYDKSSLNDIEHAILASDLGLTPANDGNVIRLIIPQLTGERRQEIAKEVGKLAEEAKI 126
Query: 376 SIRRARQKAMDAIKK--LNSSLPKDDIKRLEKE 468
++R RQ+AM A+KK + + +D+ +RLEKE
Sbjct: 127 AVRNVRQEAMKALKKQEKDGEITEDEERRLEKE 159
[129][TOP]
>UniRef100_A6SZP8 Ribosome-recycling factor n=1 Tax=Janthinobacterium sp. Marseille
RepID=RRF_JANMA
Length = 186
Score = 108 bits (270), Expect = 2e-22
Identities = 58/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Frame = +1
Query: 13 KANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTL 192
K A +M+ +I L +L+K+RTGRA G+LDH++VE G L ++A V++ID +T+
Sbjct: 7 KKTADQKMQKSIETLKADLAKVRTGRAHTGILDHVMVEYYGNPTNLSQVANVTLIDARTI 66
Query: 193 SVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDAR 372
V P++ + + +E AI + LGLNP GE + PPLT+E + M KLV EDA+
Sbjct: 67 GVQPFEKKMVAVVEKAIREADLGLNPATQGELIRVPTPPLTEERRKEMVKLVKSEAEDAK 126
Query: 373 QSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
++R R+ A +++KKL + +D+ +R + E
Sbjct: 127 IAVRNIRRDANESLKKLVKEKACSEDEERRAQDE 160
[130][TOP]
>UniRef100_P61302 Ribosome-recycling factor n=1 Tax=Bdellovibrio bacteriovorus
RepID=RRF_BDEBA
Length = 186
Score = 108 bits (270), Expect = 2e-22
Identities = 60/155 (38%), Positives = 95/155 (61%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
+K NA ++ME +++LS EL K+RTGRA MLD I V G PL ++A +S D K+
Sbjct: 6 VKKNAQAKMEKTLNSLSEELKKVRTGRAQVSMLDGIRVNYYGTPSPLSQVASISTPDAKS 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+ P++ LK +E AI+ S LG+ P DG+ + +P LT+E + + K V K E+A
Sbjct: 66 FLIAPWEVAILKDIEQAIIKSELGMAPMNDGKVIRLKVPDLTEERRKDLAKQVKKIAEEA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R ++R AR+ A D +KKL + ++ +D+ K+ E +
Sbjct: 126 RVAVRMARRDANDEVKKLQKDKAVSEDEGKKAEAD 160
[131][TOP]
>UniRef100_P82231 Ribosome-recycling factor, chloroplastic n=1 Tax=Spinacia oleracea
RepID=RRFC_SPIOL
Length = 271
Score = 108 bits (270), Expect = 2e-22
Identities = 57/155 (36%), Positives = 93/155 (60%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ N +ME I + + + +RT RASP MLD I VE G + L IA +S D +
Sbjct: 91 IETNTKQRMEKTIETIRSNFNSVRTNRASPTMLDRIEVEYYGTPVSLKSIAQISTPDASS 150
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L ++PYD +LK +E AIV+S LG++P DGE + ++PPLT + + + K+V+K E+
Sbjct: 151 LLISPYDKSSLKAIEKAIVTSQLGVSPNNDGEVIRLSLPPLTSDRRKELAKVVSKLAEEG 210
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ ++R R+ A+ + +KL L +D++K L +
Sbjct: 211 KVAVRNIRRDALKSYEKLEKEKKLSEDNVKDLSAD 245
[132][TOP]
>UniRef100_B5YGE2 Ribosome recycling factor n=1 Tax=Thermodesulfovibrio yellowstonii
DSM 11347 RepID=B5YGE2_THEYD
Length = 185
Score = 108 bits (269), Expect = 2e-22
Identities = 56/154 (36%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Frame = +1
Query: 13 KANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTL 192
K A +M A+ +LS RTGRAS G+LD+I VE G +PL ++A + + +P+ +
Sbjct: 6 KKKANEKMNQALEVFKKDLSTFRTGRASLGILDNIKVEYYGSTVPLNQVATLGIPEPRMI 65
Query: 193 SVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDAR 372
++ P++ + + ++E AI+ S LGL P DG+ + IPPLT+E + + K+V K E+AR
Sbjct: 66 TIQPWEQKMISEIERAIMKSDLGLTPINDGKMIKIVIPPLTEERRKQLVKVVRKRTEEAR 125
Query: 373 QSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+IR R+ ++ IKK L +D+ +R+++E
Sbjct: 126 VAIRNIRRDIIEEIKKAEKEKKLSEDESRRIQEE 159
[133][TOP]
>UniRef100_C4CMI6 Ribosome recycling factor n=1 Tax=Sphaerobacter thermophilus DSM
20745 RepID=C4CMI6_9CHLR
Length = 185
Score = 108 bits (269), Expect = 2e-22
Identities = 57/155 (36%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
+ A+A +M + L EL+ +RTGRASPG+++ + V+ G PL ++A +S +P+
Sbjct: 5 VLADAEGRMTKTLDNLQRELAGIRTGRASPGLIERLEVDYYGTPTPLNQVAGISAPEPRL 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L V P+D + +E AI SS LGLNP DG+ + AIPPLT+E +A+ ++V + E++
Sbjct: 65 LVVQPWDRSAMSAIEKAIRSSDLGLNPTNDGQVIRIAIPPLTEERRKALVRVVRQKVEES 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R +IR R+ A+ +K++ + +DD +R E++
Sbjct: 125 RVAIRNIRRDALAQVKEMLQEKLIGEDDERRAEQQ 159
[134][TOP]
>UniRef100_C3X1F4 Ribosome recycling factor n=1 Tax=Oxalobacter formigenes HOxBLS
RepID=C3X1F4_OXAFO
Length = 186
Score = 108 bits (269), Expect = 2e-22
Identities = 56/155 (36%), Positives = 98/155 (63%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
+K NA +M ++ +L +L+K+RTGRA G+LDHI V+ G + ++A V+++D +T
Sbjct: 6 VKKNAEQKMNKSVDSLKADLAKVRTGRAHTGILDHIQVDYYGSPTQISQVANVTLLDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+SV P++ + + +E AI S LGLNP + G+ + PPLT+E + M KLV EDA
Sbjct: 66 ISVQPWEKKMVSVIEKAIRDSDLGLNPSSVGDIIRVPTPPLTEERRKEMVKLVKTEGEDA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ ++R R+ A +A+KK+ + + +D+ +R + +
Sbjct: 126 KVAVRNIRRDANEALKKMVKDKACSEDEERRAQDD 160
[135][TOP]
>UniRef100_A1WHU5 Ribosome-recycling factor n=1 Tax=Verminephrobacter eiseniae EF01-2
RepID=RRF_VEREI
Length = 186
Score = 108 bits (269), Expect = 2e-22
Identities = 58/155 (37%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A ++M+ +I+A L K+RTGRA+P +LD + V+ G +PL ++A V++ID +T
Sbjct: 6 IRKHAATRMDQSIAAFRNNLQKIRTGRANPALLDAVQVDYYGALVPLSQVANVALIDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+SV P++ ++E AI S LGLNP A G+ + +PP+++E + M KL E A
Sbjct: 66 ISVQPWEKGMGAKIEKAIRDSDLGLNPAAMGDLIRVPMPPMSQERRKEMTKLARNEGESA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ ++R R+ A ++IKKL + +D+ KR E E
Sbjct: 126 KIAVRNLRRDANESIKKLVKDKLASEDEQKRAETE 160
[136][TOP]
>UniRef100_Q1G9N9 Ribosome-recycling factor n=1 Tax=Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842 RepID=RRF_LACDA
Length = 185
Score = 108 bits (269), Expect = 2e-22
Identities = 59/153 (38%), Positives = 93/153 (60%), Gaps = 2/153 (1%)
Frame = +1
Query: 16 ANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLS 195
A A M +I + L+ +R G A+ +LD ++VE GV PLV++A +++ +P+ L
Sbjct: 7 AKAKRNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQMAGITIPEPRVLM 66
Query: 196 VNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQ 375
+ PYD +L +E+AI++S LGL P DG + IP LT E Q + K V K E+A+
Sbjct: 67 ITPYDKTSLNDIEHAILASDLGLTPANDGNVIRLIIPQLTGERRQEIAKEVGKLAEEAKI 126
Query: 376 SIRRARQKAMDAIKK--LNSSLPKDDIKRLEKE 468
++R RQ+AM A+KK + + +D+ +RLEKE
Sbjct: 127 AVRNVRQEAMKALKKQEKDGEITEDEERRLEKE 159
[137][TOP]
>UniRef100_A1TN72 Ribosome-recycling factor n=1 Tax=Acidovorax citrulli AAC00-1
RepID=RRF_ACIAC
Length = 186
Score = 108 bits (269), Expect = 2e-22
Identities = 58/155 (37%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK N ++M+ +I A L+K+RTGRA+P +LD + VE G +PL ++A VS+ID +T
Sbjct: 6 IKKNTEAKMDQSIVAFKNNLAKIRTGRANPALLDSVQVEYYGSMVPLSQVANVSLIDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+SV P++ ++E AI S LGLNP + G+ + +PP+++E + M KL E A
Sbjct: 66 ISVQPWEKGMGAKIEKAIRESELGLNPASMGDLIRVPMPPMSEERRKEMTKLARNEGEGA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ ++R R+ A +++KKL + +D+ KR E +
Sbjct: 126 KVAVRNLRRDANESVKKLVKDKLASEDEQKRAEAD 160
[138][TOP]
>UniRef100_C6NVI4 Ribosome recycling factor n=1 Tax=Acidithiobacillus caldus ATCC
51756 RepID=C6NVI4_9GAMM
Length = 186
Score = 107 bits (268), Expect = 3e-22
Identities = 59/155 (38%), Positives = 98/155 (63%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK +A +M+ +I AL +EL++LRTGRAS G+LDH+ V+ G PL ++A +SV D ++
Sbjct: 6 IKKDAEQRMKKSIEALKSELTRLRTGRASAGLLDHVEVDYYGSPTPLSQVASISVADARS 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L V P++ + +++ AI + LGLNP A + + +P L++E + M K+V + E A
Sbjct: 66 LLVTPWEKPLIPKIDKAIRDAGLGLNPVAGSDNVRVPLPALSEERRKEMVKIVRQEGEGA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R +IR R+ A+ +K L S+ +D+ +R E+E
Sbjct: 126 RVAIRNIRRDAIAQVKDLLKQKSISEDEGRRAEEE 160
[139][TOP]
>UniRef100_C0DUW5 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC
23834 RepID=C0DUW5_EIKCO
Length = 185
Score = 107 bits (268), Expect = 3e-22
Identities = 59/155 (38%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A ++M+ ++ L L+K+RTGRA G+LD + VE G +P+ ++A V+++D +T
Sbjct: 5 IQTSAETKMQRSVEVLRENLAKVRTGRAHTGLLDQVEVEYYGSMVPVSQVANVTLLDART 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+SV PY+ +E AI S LGLNP + G+ + +P LT+E + + K+V ED
Sbjct: 65 ISVKPYEGNMAAAVEKAIRDSNLGLNPASMGDLIRVPMPMLTEERRKDLIKVVRGEAEDG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R SIR R+ A D IKKL + + +DD +R E++
Sbjct: 125 RVSIRNVRRDANDHIKKLLKDKEVSEDDARRGEEQ 159
[140][TOP]
>UniRef100_A4BS25 Ribosome recycling factor n=1 Tax=Nitrococcus mobilis Nb-231
RepID=A4BS25_9GAMM
Length = 185
Score = 107 bits (268), Expect = 3e-22
Identities = 61/155 (39%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I +A ++M +I AL+ E K+RTGRA +LDHI V G K+PL ++A V+V DP+T
Sbjct: 5 INKDAAARMGKSIEALNHEFHKIRTGRAHTSLLDHITVTYYGAKMPLNQVASVTVSDPRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
LSV P++ + +E AI+ S LGL P G + +PPLT+E + + ++V E A
Sbjct: 65 LSVTPWEKGMIPVVEKAILESDLGLTPNTAGGVIRIPLPPLTEERRRELIRVVKHETEQA 124
Query: 370 RQSIRRARQKAMDAIKK--LNSSLPKDDIKRLEKE 468
R +IR R+ A A+K + + +DD KR E +
Sbjct: 125 RIAIRNVRRDANSALKARLKDKEITEDDEKRAEDD 159
[141][TOP]
>UniRef100_B4F2D0 Ribosome-recycling factor n=2 Tax=Proteus mirabilis RepID=RRF_PROMH
Length = 185
Score = 107 bits (268), Expect = 3e-22
Identities = 60/155 (38%), Positives = 94/155 (60%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK +A +M+ ++ AL ++++K+RTGRASP +LD I+VE G PL ++A V D +T
Sbjct: 5 IKKDAQERMDKSVEALKSQINKVRTGRASPNLLDGIVVEYYGAPTPLNQVANVVAEDGRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L++ +D +E AI++S LGLNP + G + +PPLT+E + + K+V E
Sbjct: 65 LAITVFDRTLAPAVEKAIMASDLGLNPSSAGAIIRVPLPPLTEERRKDLIKVVRGDAEQG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R SIR R+ A D IK L + + +DD +R + E
Sbjct: 125 RVSIRNIRRDANDKIKALLKDKEISEDDERRSQDE 159
[142][TOP]
>UniRef100_Q12A34 Ribosome-recycling factor n=1 Tax=Polaromonas sp. JS666
RepID=RRF_POLSJ
Length = 186
Score = 107 bits (268), Expect = 3e-22
Identities = 54/155 (34%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
+K NA +M+ ++ + L+K+RTGRA+PG+LD + V+ G +P+ ++A VS++D +T
Sbjct: 6 VKQNAEQKMQQSVDSFKNSLTKIRTGRANPGLLDTVHVDYYGSMVPISQVANVSLLDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+SV+P++ ++E AI S LGLNP A G+ + +P +T+E + + K+V E A
Sbjct: 66 ISVSPWEKGMGAKIEKAIRDSDLGLNPAAQGDLIRVPMPAMTEERRKELTKVVRAEGEHA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ ++R R+ A + +KKL + +DD +R + E
Sbjct: 126 KVAVRNLRRDANEGVKKLLKEKLVSEDDERRAQDE 160
[143][TOP]
>UniRef100_B1LTQ4 Ribosome-recycling factor n=1 Tax=Methylobacterium radiotolerans
JCM 2831 RepID=RRF_METRJ
Length = 187
Score = 107 bits (268), Expect = 3e-22
Identities = 55/144 (38%), Positives = 94/144 (65%), Gaps = 2/144 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+M+ A+++LS +L LRTGRA+P +LD I V+ G +P+ ++A VSV +P+ LS++ +D
Sbjct: 14 RMQGAVASLSKDLGSLRTGRATPSLLDPIQVDAYGSMMPMAQVATVSVPEPRLLSISVWD 73
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
+ +E AI S LGLNP+ +G+ + IP + ++ + M K+ K E+AR ++R
Sbjct: 74 RSMVTAVEKAIRESDLGLNPQTEGQTIRLRIPEMNEQRRKEMVKVAHKYTEEARVAVRHV 133
Query: 391 RQKAMDAIKKL--NSSLPKDDIKR 456
R+ +D +KKL +S++ +DD KR
Sbjct: 134 RRDGLDHLKKLLKDSAISEDDEKR 157
[144][TOP]
>UniRef100_C6E515 Ribosome-recycling factor n=1 Tax=Geobacter sp. M21 RepID=RRF_GEOSM
Length = 185
Score = 107 bits (268), Expect = 3e-22
Identities = 53/153 (34%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
Frame = +1
Query: 16 ANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLS 195
+N M +I +L E K+RTGRA+ +LD I +++ G PL ++A +++ + +T++
Sbjct: 7 SNMNVHMGKSIESLRKEYQKVRTGRATTSLLDDIKIDSYGTLSPLNQVATLAIPEARTIT 66
Query: 196 VNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQ 375
++P+D + + +E AI++S LGLNP DG+ + +PPLT+E + + K + + E+A+
Sbjct: 67 ISPWDSKMIAPIEKAIMNSNLGLNPANDGKMIRLVLPPLTEERRKDIVKQLKRDAEEAKV 126
Query: 376 SIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
++R R+ A+D +KKL + S+ +D++KR EK+
Sbjct: 127 ALRNIRRDAIDQLKKLEKDKSISEDELKRAEKD 159
[145][TOP]
>UniRef100_A3DE56 Ribosome-recycling factor n=1 Tax=Clostridium thermocellum ATCC
27405 RepID=RRF_CLOTH
Length = 183
Score = 107 bits (268), Expect = 3e-22
Identities = 55/152 (36%), Positives = 90/152 (59%), Gaps = 2/152 (1%)
Frame = +1
Query: 19 NAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSV 198
N +M+ +S L EL+ +R GRA+ +LD I V+ GV P+ ++ +SV +P+ + +
Sbjct: 6 NIEEKMKKTVSVLKDELNTVRAGRANAAILDRITVDYYGVPTPINQLGTISVPEPRVIVI 65
Query: 199 NPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQS 378
P+D Q LK++E I S +G+NP DG+ + PPLT+E + + KL K EDA+ +
Sbjct: 66 QPWDAQILKEIEKEIQKSDIGINPNNDGKVIRLVFPPLTEERRKELTKLAKKYGEDAKVA 125
Query: 379 IRRARQKAMDAIK--KLNSSLPKDDIKRLEKE 468
IR R+ ++ K K N + +DD+K EK+
Sbjct: 126 IRSIRRDGIEKKKAMKKNGEITEDDLKSAEKD 157
[146][TOP]
>UniRef100_B2JIC3 Ribosome-recycling factor n=1 Tax=Burkholderia phymatum STM815
RepID=RRF_BURP8
Length = 186
Score = 107 bits (268), Expect = 3e-22
Identities = 54/151 (35%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK A +M+ ++ A +LSK+RTGRA G+LDHI V+ G +P+ ++A ++++D +T
Sbjct: 6 IKKGAEQKMQRSLDAFKNDLSKIRTGRAHTGLLDHIQVDYYGSPVPISQVANLTLVDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+ V P++ + + +E AI S LGLNP + G+ + +PPLT+E + + K+V E A
Sbjct: 66 IGVQPWEKKMVAVVEKAIRESDLGLNPASHGDVIRVPMPPLTEERRKELTKVVKSEGETA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKR 456
+ ++R R+ A + +KKL + + +DD +R
Sbjct: 126 KVAVRNLRRDANEQLKKLVKDKEISEDDERR 156
[147][TOP]
>UniRef100_Q65JJ6 Ribosome-recycling factor n=1 Tax=Bacillus licheniformis ATCC 14580
RepID=RRF_BACLD
Length = 185
Score = 107 bits (268), Expect = 3e-22
Identities = 57/143 (39%), Positives = 88/143 (61%), Gaps = 2/143 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+M+ AISA EL+ +R GRA+P +LD + VE G + PL +IA ++V + + L + PYD
Sbjct: 12 RMQKAISAYQRELATVRAGRANPSLLDKVAVEYYGAQTPLNQIASITVPEARMLVITPYD 71
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
L +E AI + LG+ P DG + IPPLT+E + + KLV K EDA+ ++R
Sbjct: 72 KTALGDIEKAIQKADLGVTPSNDGNIIRITIPPLTEERRKELAKLVKKYSEDAKVAVRNI 131
Query: 391 RQKAMDAIKKL--NSSLPKDDIK 453
R+ A D +KKL N + +D+++
Sbjct: 132 RRDANDDLKKLEKNGEMTEDELR 154
[148][TOP]
>UniRef100_UPI000196B38E hypothetical protein CATMIT_00100 n=1 Tax=Catenibacterium mitsuokai
DSM 15897 RepID=UPI000196B38E
Length = 181
Score = 107 bits (267), Expect = 4e-22
Identities = 55/144 (38%), Positives = 89/144 (61%)
Frame = +1
Query: 22 AVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVN 201
A +ME ++ A S EL +RTGRA+P MLD ++VE G PL ++A +SV++ + L +
Sbjct: 9 AKEKMEKSVEAFSNELVNIRTGRANPSMLDRVMVEYYGSPTPLNQVAGISVVEGRQLVIK 68
Query: 202 PYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSI 381
PYD ++K +E+ I + LGL P+ DG + IPPLT+E + M K V K E+A+ ++
Sbjct: 69 PYDKNSMKDIEHGIYQADLGLTPQNDGTVIRIVIPPLTEERRKEMVKQVNKLAEEAKVAL 128
Query: 382 RRARQKAMDAIKKLNSSLPKDDIK 453
R R+ A ++K + +D++K
Sbjct: 129 RNIRRNANTDVEKTGET--EDEVK 150
[149][TOP]
>UniRef100_C5T520 Ribosome recycling factor n=1 Tax=Acidovorax delafieldii 2AN
RepID=C5T520_ACIDE
Length = 186
Score = 107 bits (267), Expect = 4e-22
Identities = 57/155 (36%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK A ++M+ +I+A L K+RTGRA+P +LD + VE G +PL ++A V+++D +T
Sbjct: 6 IKKTAETKMDQSIAAFKNNLQKIRTGRANPALLDTVHVEYYGSPVPLSQVANVALLDSRT 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+SV P++ ++E AI S LGLNP + G+ + +PP+++E + M KL E A
Sbjct: 66 ISVQPWEKGMGAKIEKAIRESDLGLNPASMGDLIRVPMPPMSEERRKEMTKLARNEGESA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ ++R R+ A +++KKL + +DD KR E +
Sbjct: 126 KIAVRNLRRDANESVKKLVKDKLASEDDQKRAETD 160
[150][TOP]
>UniRef100_B4X0L4 Ribosome recycling factor n=1 Tax=Alcanivorax sp. DG881
RepID=B4X0L4_9GAMM
Length = 185
Score = 107 bits (267), Expect = 4e-22
Identities = 56/155 (36%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A S+M+ ++ AL T + ++RTGRA P +LD+I +E G + PL ++ +SV + +T
Sbjct: 5 IRNDAQSRMKKSLEALDTAMKRVRTGRAHPSLLDNITIEYYGAETPLNQMGNISVEEGRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L+++P+D + Q+E AI+ S LGLNP G + +PPLT+E + + K+V E A
Sbjct: 65 LTISPFDKSLIPQIERAIMMSDLGLNPSTSGTLIRLPLPPLTEETRRDLVKVVRAEAEKA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R S+R R+ A +K+L + +D+ +R E++
Sbjct: 125 RVSVRNVRRDANGDLKELLKEKEISEDEQRRGEEQ 159
[151][TOP]
>UniRef100_B2PWE1 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC
25827 RepID=B2PWE1_PROST
Length = 185
Score = 107 bits (267), Expect = 4e-22
Identities = 58/155 (37%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK +A +ME ++ AL ++SK+RTGRASP +LD I+V+ G PL ++A V+V D +T
Sbjct: 5 IKKDAQDRMEKSVEALKNQISKVRTGRASPSLLDGIMVDYYGAATPLRQLANVTVEDART 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L+++ +D +E AI++S LGLNP + G + +PPLT+E + + K+V E
Sbjct: 65 LAISVFDRSMSPAIEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRAEAEQG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R ++R R+ A D IK L + + +D+ +R + +
Sbjct: 125 RVAVRNIRRDANDKIKALLKDKEISEDEERRSQDD 159
[152][TOP]
>UniRef100_A7VWJ5 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753
RepID=A7VWJ5_9CLOT
Length = 184
Score = 107 bits (267), Expect = 4e-22
Identities = 56/152 (36%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = +1
Query: 19 NAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSV 198
NA +M I+AL++E + +R GRA+P +LD I+V+ G + ++A +SV + +TL++
Sbjct: 7 NADKKMNKTINALTSEFAGIRAGRANPAVLDKIMVDYYGSPTAINQLAAISVTEARTLTI 66
Query: 199 NPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQS 378
+P+D + +E AI SS LG+NP+ DG+ + PPLT++ + + K + K E+A+ +
Sbjct: 67 SPWDQSVVHAVEKAIQSSDLGINPQTDGKVIRLIFPPLTEDRRRDIVKDIKKMEEEAKVA 126
Query: 379 IRRARQKAMDAIK--KLNSSLPKDDIKRLEKE 468
IR R+ +MD +K K N + +DD+K EK+
Sbjct: 127 IRSIRRDSMDKLKALKKNGEITEDDLKDAEKK 158
[153][TOP]
>UniRef100_A6GAJ7 Ribosome recycling factor n=1 Tax=Plesiocystis pacifica SIR-1
RepID=A6GAJ7_9DELT
Length = 185
Score = 107 bits (267), Expect = 4e-22
Identities = 58/147 (39%), Positives = 92/147 (62%), Gaps = 2/147 (1%)
Frame = +1
Query: 22 AVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVN 201
A M++A L+ ELS++R GRA+P +LD + VE GV++ L +A VS D + L V
Sbjct: 9 AEDAMKSAQERLARELSRVRAGRANPALLDGVRVEAYGVQMSLREVATVSTADARLLIVK 68
Query: 202 PYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSI 381
P+D T+ +E AI++S LGLNP +DG L IPPLT+E +++ K V E+A+ +I
Sbjct: 69 PFDANTISSVEKAIMNSGLGLNPSSDGVVLRVPIPPLTEERRRSLVKQVKDQAEEAKIAI 128
Query: 382 RRARQKAMDAIK--KLNSSLPKDDIKR 456
R R++ D +K + + + +D++KR
Sbjct: 129 RSGRREGNDLLKGAEKDKEISEDELKR 155
[154][TOP]
>UniRef100_C5YLY5 Putative uncharacterized protein Sb07g001230 n=1 Tax=Sorghum
bicolor RepID=C5YLY5_SORBI
Length = 265
Score = 107 bits (267), Expect = 4e-22
Identities = 60/155 (38%), Positives = 88/155 (56%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ A +ME AI + T + +RTGRA+P MLD I VE G + L IA +S D +
Sbjct: 85 IEDQAKEKMEKAIETVQTNFNTVRTGRANPAMLDRIEVEYYGTPVNLKSIAQISTPDATS 144
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L + PYD +LK +E IV++ LG+ P DGE + +PPLT + + + K V K ED
Sbjct: 145 LLIQPYDKSSLKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKELAKTVAKLSEDG 204
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ +IR R+ A+ A KL L +D++K L +
Sbjct: 205 KVAIRNIRRDAIKAYDKLQKEKKLSEDNVKDLSAD 239
[155][TOP]
>UniRef100_C4LJA6 Ribosome-recycling factor n=1 Tax=Corynebacterium kroppenstedtii
DSM 44385 RepID=RRF_CORK4
Length = 185
Score = 107 bits (267), Expect = 4e-22
Identities = 54/148 (36%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+M ++ +L+ +RTGRA+P M + + E GV P+ ++A +SV +P+ L + PY+
Sbjct: 12 RMTQSVEYAREDLTTIRTGRANPSMFNGVQAEYYGVMTPITQMATISVPEPRMLLIKPYE 71
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
P + +ENAI +S LG+NP DG+ L +P LT+E + M +L EDAR +IR
Sbjct: 72 PSIMNAIENAIRNSDLGVNPTNDGQVLRVTVPQLTEERRKEMVRLAKSKGEDARIAIRNI 131
Query: 391 RQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R+K MD +K++ + +D+++ EKE
Sbjct: 132 RRKGMDELKRIQKDGEAGEDEVQAAEKE 159
[156][TOP]
>UniRef100_C3PH48 Ribosome-recycling factor n=1 Tax=Corynebacterium aurimucosum ATCC
700975 RepID=RRF_CORA7
Length = 185
Score = 107 bits (267), Expect = 4e-22
Identities = 56/155 (36%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ A M A++ +L +RTGRA+P M + ++ E GV P+ ++A +SV +P+
Sbjct: 5 IQLEAEEHMTASVEHTREQLLTIRTGRANPAMFNGLVAEYYGVPTPITQMATISVPEPRM 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L + PY+ + ++ENAI +S LG+NP DG+ L IP LT+E + M K+ ED
Sbjct: 65 LLIKPYEQSVMNEIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRRDMVKMAKSKGEDG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ +IR R++AM+ +KKL + +D++ EKE
Sbjct: 125 KIAIRNIRRRAMEQLKKLQKDGDAGEDEVIAAEKE 159
[157][TOP]
>UniRef100_C6C1S8 Ribosome recycling factor n=1 Tax=Desulfovibrio salexigens DSM 2638
RepID=C6C1S8_DESAD
Length = 185
Score = 107 bits (266), Expect = 5e-22
Identities = 55/155 (35%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
+ A+ +ME A++AL + +KLRTGRA+ ++D+I V+ G P+ ++A VS+ D +T
Sbjct: 5 VLADGKKRMEGALTALENDFAKLRTGRAATSLVDNISVDYYGTPTPINQLASVSIPDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+S+ P+D ++ A+ S LGLNP DG+ L AIPPLT+E + + K+ K ED+
Sbjct: 65 ISIQPWDKGAFPLIDKALQQSDLGLNPVNDGKVLRIAIPPLTEERRKELVKIAKKYTEDS 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ +IR R+ D +KKL + + +D+ ++ + +
Sbjct: 125 KIAIRNVRRDMNDTLKKLEKDKDISEDEQRKAQDD 159
[158][TOP]
>UniRef100_Q1NXW5 Ribosome recycling factor n=1 Tax=delta proteobacterium MLMS-1
RepID=Q1NXW5_9DELT
Length = 184
Score = 107 bits (266), Expect = 5e-22
Identities = 57/148 (38%), Positives = 95/148 (64%), Gaps = 2/148 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+ME ++ A ELS++RTGRAS +LD I VE G ++PL ++A +++ + + + + P+D
Sbjct: 11 KMEQSLEAYRRELSRIRTGRASLNILDGIKVEAYGSQLPLNQVATLTIPESRMIVIQPWD 70
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
Q K +E AI +S +GL P +DG+ + IP LT+E + + K + K E+ R ++R
Sbjct: 71 AQQGKAIEKAIQASDIGLTPSSDGKVIRLTIPQLTEERRKDLVKQLKKLSEEYRVAVRNV 130
Query: 391 RQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R++A+D +KKL + LP+DD RL+ E
Sbjct: 131 RREAIDRLKKLKNDKQLPEDDFFRLQDE 158
[159][TOP]
>UniRef100_C7LR52 Ribosome recycling factor n=1 Tax=Desulfomicrobium baculatum DSM
4028 RepID=C7LR52_DESBD
Length = 184
Score = 107 bits (266), Expect = 5e-22
Identities = 56/152 (36%), Positives = 94/152 (61%), Gaps = 2/152 (1%)
Frame = +1
Query: 19 NAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSV 198
+ ++M+ +I +L + SKLRTGRAS ++D I VE G PL ++A VS+ D +T+S+
Sbjct: 7 DCTNRMQKSIDSLEKDFSKLRTGRASTALVDSIRVEYYGTPTPLNQVASVSIPDSRTISI 66
Query: 199 NPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQS 378
+P+D +E AI+ S LGL P DG + IP LT+E + + K+ K E+A+ +
Sbjct: 67 SPWDRNAFNSIEKAIMKSDLGLTPINDGRAIRINIPVLTEERRKDLVKMAKKYTEEAKVA 126
Query: 379 IRRARQKAMDAIKKLNSS--LPKDDIKRLEKE 468
IR R+ DA+KK++++ + +DD+ + + E
Sbjct: 127 IRNVRRDVNDALKKMHTAKEISEDDLHKAQDE 158
[160][TOP]
>UniRef100_B0AB03 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM
16795 RepID=B0AB03_9CLOT
Length = 184
Score = 107 bits (266), Expect = 5e-22
Identities = 56/149 (37%), Positives = 92/149 (61%), Gaps = 2/149 (1%)
Frame = +1
Query: 28 SQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPY 207
+QM+ I AL E S +R GRA+ MLD I V+ G P+ +I +SV +P+TL +NP+
Sbjct: 10 AQMDKTIEALKYEFSTIRAGRANAQMLDKIRVDYYGTPTPINQIGSISVPEPRTLVINPW 69
Query: 208 DPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRR 387
D +K++E AI++S LGLNP DG+ + +P LT+E + K K+ E+ + IR
Sbjct: 70 DKSAMKEIEKAIMNSDLGLNPTNDGDVIRLNVPALTEERRIELTKKAKKAAEEFKVRIRN 129
Query: 388 ARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R+ A D +KK+ + + +D++KR +++
Sbjct: 130 ERRDANDKLKKMQKDGEITEDELKRGQED 158
[161][TOP]
>UniRef100_Q7XY97 Ribosome recycling factor n=1 Tax=Griffithsia japonica
RepID=Q7XY97_GRIJA
Length = 230
Score = 107 bits (266), Expect = 5e-22
Identities = 59/147 (40%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
Frame = +1
Query: 28 SQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPY 207
++M+ I ++ + + +RTGRASP +LD I V G PL +A VSV TL V PY
Sbjct: 56 ARMQKTIDSVKSAFNSVRTGRASPSLLDRIQVNYYGADTPLNSLATVSVSGTSTLVVEPY 115
Query: 208 DPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRR 387
D + +E +++ S +GL P +DG + +IP LTKE + K V ED R +IR
Sbjct: 116 DKSCISDIERSLMESDIGLTPNSDGSTIRLSIPQLTKERRSQLVKQVKSMAEDGRVAIRN 175
Query: 388 ARQKAMDAIKKL--NSSLPKDDIKRLE 462
R+ A+D+IKKL S L KD+ K L+
Sbjct: 176 IRRDAVDSIKKLEKKSELGKDESKTLQ 202
[162][TOP]
>UniRef100_C0PLX3 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C0PLX3_MAIZE
Length = 264
Score = 107 bits (266), Expect = 5e-22
Identities = 59/155 (38%), Positives = 88/155 (56%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ A +ME AI + + +RTGRA+P MLD I VE G + L IA +S D +
Sbjct: 84 IEDQAKEKMEKAIETVQANFNTVRTGRANPAMLDRIEVEYYGTPVNLKSIAQISTPDATS 143
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L + PYD +LK +E IV++ LG+ P DGE + +PPLT + + ++K V K ED
Sbjct: 144 LLIQPYDKSSLKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKELSKTVAKLAEDG 203
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ +IR R+ A+ A KL L +D++K L +
Sbjct: 204 KVAIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSAD 238
[163][TOP]
>UniRef100_B6TQ52 Ribosome recycling factor n=1 Tax=Zea mays RepID=B6TQ52_MAIZE
Length = 264
Score = 107 bits (266), Expect = 5e-22
Identities = 59/155 (38%), Positives = 88/155 (56%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ A +ME AI + + +RTGRA+P MLD I VE G + L IA +S D +
Sbjct: 84 IEDQAKEKMEKAIETVQANFNTVRTGRANPAMLDRIEVEYYGTPVNLKSIAQISTPDATS 143
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L + PYD +LK +E IV++ LG+ P DGE + +PPLT + + ++K V K ED
Sbjct: 144 LLIQPYDKSSLKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKELSKTVAKLAEDG 203
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ +IR R+ A+ A KL L +D++K L +
Sbjct: 204 KVAIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSAD 238
[164][TOP]
>UniRef100_A9P0R2 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9P0R2_PICSI
Length = 279
Score = 107 bits (266), Expect = 5e-22
Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A+ +ME + + T + +RTGRASP LD + VE G + L +A VSV D T
Sbjct: 99 IEEDAIERMEKTLETIKTNFNSIRTGRASPAFLDRVEVEYYGSPVNLKSLAQVSVPDGGT 158
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L V PYD +LK +E AI S LGL P DG + +IP LT E + + K+V K E+
Sbjct: 159 LLVQPYDKSSLKSIEKAISKSNLGLTPSNDGNVIRLSIPQLTSERRKELLKVVAKIAEEG 218
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRL 459
+ +IR R+ A+ A +KL L +D++K L
Sbjct: 219 KIAIRNIRRDAIKAYEKLEKEKKLSEDNVKDL 250
[165][TOP]
>UniRef100_Q07NJ0 Ribosome-recycling factor n=1 Tax=Rhodopseudomonas palustris BisA53
RepID=RRF_RHOP5
Length = 187
Score = 107 bits (266), Expect = 5e-22
Identities = 58/145 (40%), Positives = 89/145 (61%), Gaps = 2/145 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+M+ A AL EL LRTGRAS ML+ + V+ G +PL+++A +SV +P+ LSV +D
Sbjct: 14 RMQGATHALQHELGGLRTGRASSSMLEPVQVDAYGTHMPLIQVATISVPEPRLLSVQVWD 73
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
+K +E AIV S LGL+P +G+ + IP L +E + + K+ K E AR ++R
Sbjct: 74 KSMIKAVEKAIVDSNLGLSPSTEGQVIRLRIPELNEERRKELVKVAHKYAEAARVAVRHV 133
Query: 391 RQKAMDAIKKL--NSSLPKDDIKRL 459
R+ +D +KKL N + +DD +RL
Sbjct: 134 RRDGLDTLKKLEKNHEISEDDQERL 158
[166][TOP]
>UniRef100_Q03WX8 Ribosome-recycling factor n=2 Tax=Leuconostoc mesenteroides
RepID=RRF_LEUMM
Length = 181
Score = 107 bits (266), Expect = 5e-22
Identities = 58/150 (38%), Positives = 91/150 (60%)
Frame = +1
Query: 19 NAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSV 198
NA +M+ A AL EL+ +RTGRA+P +L+ + VE G PL ++A +SV + + L +
Sbjct: 7 NAKERMKGAQEALQRELANIRTGRANPNILNRVEVEYYGAMTPLNQVASISVPEARILLI 66
Query: 199 NPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQS 378
P+D L+ + +AI S LGLNP +DG + AIP +T+E + + K V E A+ S
Sbjct: 67 TPFDKSALEAIVHAINVSDLGLNPASDGNIVRLAIPQMTEERRKELAKEVKAEAEKAKVS 126
Query: 379 IRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
+R R+ MD IKK + +P+DD ++ E +
Sbjct: 127 VRNVRRDIMDDIKK-DKDMPEDDARKAEDQ 155
[167][TOP]
>UniRef100_Q313G7 Ribosome-recycling factor n=1 Tax=Desulfovibrio desulfuricans
subsp. desulfuricans str. G20 RepID=RRF_DESDG
Length = 184
Score = 107 bits (266), Expect = 5e-22
Identities = 58/156 (37%), Positives = 96/156 (61%), Gaps = 2/156 (1%)
Frame = +1
Query: 7 TIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPK 186
TI +ME A++AL E +LRTGRAS ++D I V+ G P+ ++A V+V D +
Sbjct: 3 TILLETEERMEKAVAALDREFGRLRTGRASTSLVDSIKVDYYGTPTPINQLASVAVPDSR 62
Query: 187 TLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCED 366
T+++ P+D +E AI+ S LGL P DG+ + ++PPLT+E + + K+ K ED
Sbjct: 63 TITIQPWDRGAFALVEKAIMQSDLGLTPINDGKIIRISMPPLTEERRKELVKVAKKYTED 122
Query: 367 ARQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
A+ ++R R+ A + IKK+ + ++ +DD+KR + E
Sbjct: 123 AKVAVRNIRRDANEQIKKMEKDKAITEDDMKRGQDE 158
[168][TOP]
>UniRef100_Q3AB80 Ribosome-recycling factor n=1 Tax=Carboxydothermus hydrogenoformans
Z-2901 RepID=RRF_CARHZ
Length = 185
Score = 107 bits (266), Expect = 5e-22
Identities = 58/155 (37%), Positives = 90/155 (58%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I A M+ AI L E + +R GRA+P +L+ ++VE G ++P+ ++A +S +P+
Sbjct: 5 ILKEAQDHMQKAIEVLKKEFATMRVGRATPALLEKVVVEYYGTQMPVNQLATISAPEPRL 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L + P+D L +E AI+ S LG+ P DG + AIPPLT+E Q + K+ K E+A
Sbjct: 65 LVIQPWDKGALGAIEKAILKSDLGITPTNDGSVIRLAIPPLTQERRQELVKVARKKAEEA 124
Query: 370 RQSIRRARQKAMDAIKKLNSS--LPKDDIKRLEKE 468
R +IR R+ A D IK L + +D+ KR + E
Sbjct: 125 RVAIRNIRRDANDRIKDLEKDKVISEDEGKRGQDE 159
[169][TOP]
>UniRef100_C2BNU8 Ribosome recycling factor n=2 Tax=Corynebacterium
RepID=C2BNU8_9CORY
Length = 185
Score = 106 bits (265), Expect = 7e-22
Identities = 56/155 (36%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ A M A++ +L +RTGRA+P M + ++ E GV P+ ++A +SV +P+
Sbjct: 5 IQLEAEEHMTASVEHTREQLVTIRTGRANPTMFNGLVAEYYGVPTPITQMATISVPEPRM 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L + PY+ + ++EN+I +S LG+NP DG+ L +P LT+E + M KL ED
Sbjct: 65 LLIKPYEQSMIHEIENSIRNSDLGVNPTNDGQVLRVTVPQLTEERRKEMVKLAKSKGEDG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ +IR R+KAM+ +KKL + +D++ EKE
Sbjct: 125 KIAIRNIRRKAMEQLKKLQKDGDAGEDEVIAAEKE 159
[170][TOP]
>UniRef100_A6WLA9 Ribosome-recycling factor n=2 Tax=Shewanella baltica
RepID=RRF_SHEB8
Length = 185
Score = 106 bits (265), Expect = 7e-22
Identities = 60/155 (38%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK +A +M + A +++K+RTGRA P +LD I V G PL ++A V V D +T
Sbjct: 5 IKKDAQERMGKCVDATKNQMAKVRTGRAHPSLLDSIQVSYYGTMTPLNQVANVGVEDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
LSV +D ++ +E AI+SS LGLNP + G L +P LT+E + K+V E+
Sbjct: 65 LSVTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRNEAENG 124
Query: 370 RQSIRRARQKAMDAIKKLN--SSLPKDDIKRLEKE 468
R +IR R+ A+ +KKL + +DD++R E+E
Sbjct: 125 RIAIRNVRRDAISEVKKLEKAKACTEDDVRRSEEE 159
[171][TOP]
>UniRef100_B8E7R3 Ribosome-recycling factor n=2 Tax=Shewanella baltica
RepID=RRF_SHEB2
Length = 185
Score = 106 bits (265), Expect = 7e-22
Identities = 60/155 (38%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK +A +M + A +++K+RTGRA P +LD I V G PL ++A V V D +T
Sbjct: 5 IKKDAQERMGKCVDATKNQMAKVRTGRAHPSLLDSIQVSYYGTMTPLNQVANVGVEDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
LSV +D ++ +E AI+SS LGLNP + G L +P LT+E + K+V E+
Sbjct: 65 LSVTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRNEAENG 124
Query: 370 RQSIRRARQKAMDAIKKLN--SSLPKDDIKRLEKE 468
R +IR R+ A+ +KKL + +DD++R E+E
Sbjct: 125 RIAIRNVRRDAISEVKKLEKAKACTEDDVRRSEEE 159
[172][TOP]
>UniRef100_A4W6R7 Ribosome-recycling factor n=1 Tax=Enterobacter sp. 638
RepID=RRF_ENT38
Length = 185
Score = 106 bits (265), Expect = 7e-22
Identities = 59/155 (38%), Positives = 93/155 (60%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A +ME + A ++SK+RTGRASP +LD IIVE G PL ++A V+V D +T
Sbjct: 5 IRKDAEVRMEKCVEAFKNQISKVRTGRASPSLLDGIIVEYYGTPTPLRQLASVTVEDTRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L +N +D +E AI++S LGLNP + G + +P LT+E + + K+V E A
Sbjct: 65 LKINVFDRSLGPAVEKAIMASDLGLNPSSAGTDIRVPLPALTEERRKELIKVVRGEAEGA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R ++R R+ A D +K L + + +DD +R + +
Sbjct: 125 RVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDD 159
[173][TOP]
>UniRef100_B6J8M4 Ribosome-recycling factor n=4 Tax=Coxiella burnetii RepID=RRF_COXB1
Length = 185
Score = 106 bits (265), Expect = 7e-22
Identities = 54/147 (36%), Positives = 95/147 (64%), Gaps = 2/147 (1%)
Frame = +1
Query: 28 SQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPY 207
S+ME ++ +L TEL+KLRTGRA P +L+HI V+ V+ PL ++A +++ +P+TLS+ P+
Sbjct: 11 SRMEKSLGSLKTELAKLRTGRAHPSLLEHIKVDYYNVETPLSQVASIAIENPRTLSITPW 70
Query: 208 DPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRR 387
+ + +E AI + LGLNP G + +PPLT+E + + ++V + E AR +IR
Sbjct: 71 EKNMVGPIEKAIQKADLGLNPATVGMVIRVPLPPLTEERRKELARVVREEAEHARVAIRN 130
Query: 388 ARQKAMDAIKKL--NSSLPKDDIKRLE 462
R++A + +K+L + +D+ +R +
Sbjct: 131 IRREANNDLKELMKEKEISEDEERRAQ 157
[174][TOP]
>UniRef100_A4QF29 Ribosome-recycling factor n=1 Tax=Corynebacterium glutamicum R
RepID=RRF_CORGB
Length = 185
Score = 106 bits (265), Expect = 7e-22
Identities = 56/151 (37%), Positives = 92/151 (60%), Gaps = 2/151 (1%)
Frame = +1
Query: 22 AVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVN 201
A +M A + +L+ +RTGRA+P M + ++ E GV P+ +++ +SV +P+ L +
Sbjct: 9 AEERMTATVEHTREDLTTIRTGRANPAMFNGVMAEYYGVPTPITQMSSISVPEPRMLLIK 68
Query: 202 PYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSI 381
PY+ +++ +ENAI +S LG+NP DG+ L IP LT+E + M KL ED + +I
Sbjct: 69 PYEMSSMQVIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRKDMVKLAKGKGEDGKIAI 128
Query: 382 RRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R R+K MD +KKL + +D+++ EKE
Sbjct: 129 RNIRRKGMDQLKKLQKDGDAGEDEVQAAEKE 159
[175][TOP]
>UniRef100_B9MKP8 Ribosome-recycling factor n=1 Tax=Anaerocellum thermophilum DSM
6725 RepID=RRF_ANATD
Length = 184
Score = 106 bits (265), Expect = 7e-22
Identities = 54/151 (35%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Frame = +1
Query: 22 AVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVN 201
A +M+ AI L E + +R GRA+P +LD ++V+ GV P+ ++A ++V + + + +
Sbjct: 8 AEEKMKKAIETLKEEFATIRAGRANPHILDKVMVDYYGVPTPIPQVASITVPEARMIVIQ 67
Query: 202 PYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSI 381
P++ + LK++E AI S LG+NP DG+ + P LT+E + + K V K EDA+ +I
Sbjct: 68 PWEARMLKEIEKAIQKSDLGVNPTNDGKVIRLIFPELTEERRKELVKQVKKMAEDAKVAI 127
Query: 382 RRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R R++A+D KK+ N+ + +DD+K E++
Sbjct: 128 RNIRREALDEYKKMKKNNEITEDDLKDAEED 158
[176][TOP]
>UniRef100_A6TRM0 Ribosome-recycling factor n=1 Tax=Alkaliphilus metalliredigens QYMF
RepID=RRF_ALKMQ
Length = 185
Score = 106 bits (265), Expect = 7e-22
Identities = 53/148 (35%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+M + L + + +R G+A+P MLD I V+ G PL ++A VS +P+ L + PYD
Sbjct: 12 KMTKTLGVLKDDFNSIRAGKANPSMLDRITVDYYGSITPLKQVASVSAPEPRLLIIQPYD 71
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
P + +E A++ S LGLNP DG+ + IP LT+E + + K+V + E+ R ++R
Sbjct: 72 PSVINGIEKALMMSDLGLNPSNDGKIIRLNIPQLTEERRKELTKVVKRVAEEGRVALRNG 131
Query: 391 RQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R+ A + +KK+ +S L +DD+K+ ++E
Sbjct: 132 RRDANEQLKKMEKDSELTEDDLKQAQEE 159
[177][TOP]
>UniRef100_A1W915 Ribosome-recycling factor n=2 Tax=Comamonadaceae RepID=RRF_ACISJ
Length = 186
Score = 106 bits (265), Expect = 7e-22
Identities = 58/155 (37%), Positives = 95/155 (61%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK ++M+ +I+A L+K+RTGRA+P +LD I VE G +PL ++A V+++D +T
Sbjct: 6 IKKTTEAKMDQSIAAFKNNLAKIRTGRANPQLLDTIHVEYYGSMVPLSQVANVALLDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+SV P++ ++E AI S LGLNP + G+ + +PP+++E + M KL E A
Sbjct: 66 ISVQPWEKNMGAKIEKAIRESDLGLNPASMGDLIRVPMPPMSEERRKEMTKLARSEGEGA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ +IR R+ A + +KKL + +DD KR E +
Sbjct: 126 KVAIRNLRRDANEGVKKLVKDKLASEDDQKRAEAD 160
[178][TOP]
>UniRef100_UPI00018268EF hypothetical protein ENTCAN_00439 n=1 Tax=Enterobacter cancerogenus
ATCC 35316 RepID=UPI00018268EF
Length = 185
Score = 106 bits (264), Expect = 9e-22
Identities = 58/155 (37%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A +M+ + A ++SK+RTGRASP +LD IIVE G PL ++A V+V D +T
Sbjct: 5 IRKDAEVRMDKCVEAFKNQISKIRTGRASPSLLDGIIVEYYGTPTPLRQLASVTVEDTRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L +N +D +E AI++S LGLNP + G + +P LT+E + + K+V E
Sbjct: 65 LKINVFDRSMSPAIEKAIMASDLGLNPSSAGADIRVPLPALTEERRKDLIKVVRGEAEQG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R S+R R+ A D +K L + +DD +R + +
Sbjct: 125 RVSVRNVRRDANDKVKALLKEKEISEDDDRRSQDD 159
[179][TOP]
>UniRef100_C6ML70 Ribosome recycling factor n=1 Tax=Geobacter sp. M18
RepID=C6ML70_9DELT
Length = 185
Score = 106 bits (264), Expect = 9e-22
Identities = 52/147 (35%), Positives = 97/147 (65%), Gaps = 2/147 (1%)
Frame = +1
Query: 34 MEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYDP 213
M+ I +L + K+RTGRAS +LD I V++ G PL ++A ++V + +T+++ P+D
Sbjct: 13 MDKTIESLRKDYQKVRTGRASTSLLDEIKVDSYGNLSPLNQVATLAVPEARTITIQPWDS 72
Query: 214 QTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRAR 393
+ ++ +E AI++S LGLNP DG+ + +PPLT+E + + K + + E+++ ++R R
Sbjct: 73 KMIQPIEKAIMNSNLGLNPANDGKMIRLTLPPLTEERRKDIVKQLKRDAEESKVALRNIR 132
Query: 394 QKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ A+D +KKL + + +D++KR EK+
Sbjct: 133 RDAIDQLKKLEKDKQISEDELKRAEKD 159
[180][TOP]
>UniRef100_B9Z2R1 Ribosome recycling factor n=1 Tax=Lutiella nitroferrum 2002
RepID=B9Z2R1_9NEIS
Length = 185
Score = 106 bits (264), Expect = 9e-22
Identities = 56/151 (37%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
+K +A +M+ ++ A +L+K+RTGRA G+LDH++V+ G +P+ ++A V++ID +T
Sbjct: 5 VKKSAEQKMQKSLEAFKNDLTKVRTGRAHTGILDHVMVDYYGSDVPVNQVANVTLIDART 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+ V P++ L ++E AI S LGLNP + GE + +P LT+E + + KLV E A
Sbjct: 65 IGVQPWEKSMLGKIEKAIRDSDLGLNPASMGEIIRVPMPMLTEERRKDLIKLVRGEAEGA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKR 456
R ++R R+ A + K L + S+ +DD +R
Sbjct: 125 RVAVRNIRRDANNEFKNLLKDKSITEDDERR 155
[181][TOP]
>UniRef100_B1QUZ3 Ribosome recycling factor n=2 Tax=Clostridium butyricum
RepID=B1QUZ3_CLOBU
Length = 185
Score = 106 bits (264), Expect = 9e-22
Identities = 59/152 (38%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Frame = +1
Query: 19 NAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSV 198
NA +M+ IS L ++LS ++ GRA+P MLD I VE G PL ++A +S +P+ L +
Sbjct: 8 NAEEKMKKTISVLESDLSTMKAGRANPTMLDRIQVEYYGSMCPLSQVANISAPEPRVLMI 67
Query: 199 NPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQS 378
P++ LK +E AI+ S LGLNP DG + +P LT E + + K V K+ E+A+ +
Sbjct: 68 TPWEKPMLKDIERAILKSDLGLNPSNDGSVIRLVVPELTAETRKTLVKNVKKTGEEAKVA 127
Query: 379 IRRARQKAMDAIK--KLNSSLPKDDIKRLEKE 468
+R R+ A D IK K + + +D IK+ E +
Sbjct: 128 VRSIRKAANDKIKTLKKDGDISEDQIKKGEDD 159
[182][TOP]
>UniRef100_A3JCX0 Ribosome recycling factor n=1 Tax=Marinobacter sp. ELB17
RepID=A3JCX0_9ALTE
Length = 185
Score = 106 bits (264), Expect = 9e-22
Identities = 59/155 (38%), Positives = 95/155 (61%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK A +M +I AL++ +K+RTGRA P +LD ++V G + PL ++A V+V D +T
Sbjct: 5 IKTEAEIKMTKSIEALASAFNKIRTGRAHPSILDSVMVNYYGQETPLRQVASVNVEDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L+V+P++ + Q+E AI++S LGLNP G+ + +P LT+E + M K E
Sbjct: 65 LTVSPWEKNLVPQIEKAIMTSDLGLNPSTSGDLIRLPMPMLTEETRKNMVKQARADAEHG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R S+R AR+ A +K+L + + +DD +R E+E
Sbjct: 125 RVSVRNARRDANSTLKELLKDKDISEDDERRGEEE 159
[183][TOP]
>UniRef100_A4RTH1 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RTH1_OSTLU
Length = 176
Score = 106 bits (264), Expect = 9e-22
Identities = 57/149 (38%), Positives = 89/149 (59%), Gaps = 2/149 (1%)
Frame = +1
Query: 25 VSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNP 204
+ +ME + A++ + S +RTGRA+ +LD I V+ G PL IA S D +T+++ P
Sbjct: 1 MERMEKTMDAIANDFSTVRTGRANAAVLDRIEVDYYGAPTPLKTIANASTPDAQTITIQP 60
Query: 205 YDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIR 384
+D +K +E AI S LG+NP DG + +PPLT E + + KLV+K ED + ++R
Sbjct: 61 FDKSAIKDIERAINESDLGMNPSNDGNIIRLNVPPLTAERRKELAKLVSKLGEDGKVALR 120
Query: 385 RARQKAMDAIKKLN--SSLPKDDIKRLEK 465
R+ AM A +KL S +D+I +L+K
Sbjct: 121 NVRRDAMKAYEKLEKAGSFGEDEIAKLKK 149
[184][TOP]
>UniRef100_Q085D9 Ribosome-recycling factor n=1 Tax=Shewanella frigidimarina NCIMB
400 RepID=RRF_SHEFN
Length = 185
Score = 106 bits (264), Expect = 9e-22
Identities = 60/156 (38%), Positives = 91/156 (58%), Gaps = 2/156 (1%)
Frame = +1
Query: 7 TIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPK 186
TI +A +M + A +++K+RTGRA P +LD I V G PL ++A V V D +
Sbjct: 4 TIMLDAQERMSKCVDATKNQMAKVRTGRAHPSLLDSIQVSCYGSMSPLKQVANVGVEDSR 63
Query: 187 TLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCED 366
TL+VN +D ++ +E AI+SS LGLNP + G L +P LT+E + K+V E+
Sbjct: 64 TLTVNVFDRSMVQAVEKAIMSSDLGLNPMSAGATLRIPLPSLTEERRKDFIKVVRNEAEN 123
Query: 367 ARQSIRRARQKAMDAIKKLN--SSLPKDDIKRLEKE 468
R +IR R+ A+ +KKL + +DD++R E E
Sbjct: 124 GRIAIRNVRRDAISEVKKLEKAKACTEDDVRRSEDE 159
[185][TOP]
>UniRef100_Q21HH5 Ribosome-recycling factor n=1 Tax=Saccharophagus degradans 2-40
RepID=RRF_SACD2
Length = 185
Score = 106 bits (264), Expect = 9e-22
Identities = 58/155 (37%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK+++ +M AI AL T +K+RTGRA P +LD ++V G PL ++A V+V+D +T
Sbjct: 5 IKSDSEERMSRAIEALGTHFNKIRTGRAHPSILDGVMVSYYGSATPLSQVANVTVLDART 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
LS++P++ + ++E AI+ S LGLNP G+ + +P LT+E + K E A
Sbjct: 65 LSISPWEKNIVPEIEKAIMKSDLGLNPVTTGDLIRVPMPMLTEETRKGYIKRARAEAESA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R SIR R+ A+ +K L + + +DD +R E
Sbjct: 125 RVSIRNVRRDALAEVKALVKDKEISEDDERRAADE 159
[186][TOP]
>UniRef100_Q1LNF5 Ribosome-recycling factor n=1 Tax=Ralstonia metallidurans CH34
RepID=RRF_RALME
Length = 186
Score = 106 bits (264), Expect = 9e-22
Identities = 54/154 (35%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Frame = +1
Query: 13 KANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTL 192
K + +M+ +I A +L+K+RTGRA G+LDH+ V+ G +P+ ++A VS+ D +T+
Sbjct: 7 KKSVEQKMQKSIEAFKADLAKVRTGRAHTGLLDHVQVDYYGSMVPISQVAAVSLADARTI 66
Query: 193 SVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDAR 372
SV P++ + ++ +E AI LGLNP G+ + +PPLT+E + + K+V E A+
Sbjct: 67 SVQPWEKKMVQAVEKAIRDGDLGLNPATMGDVIRVPMPPLTEERRRELTKVVKGEAEGAK 126
Query: 373 QSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
++R R+ A + KKL + ++ +DD +R + E
Sbjct: 127 VAVRNLRRDANEQFKKLVKDKAISEDDERRGQDE 160
[187][TOP]
>UniRef100_B1XTU6 Ribosome-recycling factor n=1 Tax=Polynucleobacter necessarius
subsp. necessarius STIR1 RepID=RRF_POLNS
Length = 186
Score = 106 bits (264), Expect = 9e-22
Identities = 56/151 (37%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK NA +ME ++ AL T L K+R+GRA+PG+L+HI V+ G PL ++A + + D +T
Sbjct: 6 IKTNANQKMEKSLEALKTNLVKVRSGRANPGILEHIHVDYYGNPTPLSQVASLGLADART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
++V P++ + +E AI S LGLNP + G + +P LT+E + + K+V EDA
Sbjct: 66 INVQPFEKTMVAAIEKAIRDSDLGLNPVSQGTVIRVPMPALTEERRRELTKVVKSEGEDA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKR 456
+ ++R R+ A + +K+L + + +DD +R
Sbjct: 126 KIAVRNLRRDANEHLKRLTKDKEISEDDERR 156
[188][TOP]
>UniRef100_A1AQN5 Ribosome-recycling factor n=1 Tax=Pelobacter propionicus DSM 2379
RepID=RRF_PELPD
Length = 185
Score = 106 bits (264), Expect = 9e-22
Identities = 51/156 (32%), Positives = 99/156 (63%), Gaps = 2/156 (1%)
Frame = +1
Query: 7 TIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPK 186
T+ ++ + ME ++ L E K+RTGRAS +LD + ++ G P+ +IA +++ +P+
Sbjct: 4 TVLSDMKTHMEKTVAVLKAEFQKVRTGRASTAILDSVKMDYYGNPTPISQIATLAIPEPR 63
Query: 187 TLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCED 366
+++ P++ + + +E AI ++ +GL P DG+ + ++PPLT+E + + K + K ED
Sbjct: 64 MITITPWEAKQISVIEKAIFNANIGLTPSNDGKSIRLSLPPLTEERRREIVKDLKKMAED 123
Query: 367 ARQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R ++R R+ A+D +KKL + S+ +D++K+ EKE
Sbjct: 124 NRVALRNIRRDAIDRLKKLEKDKSITEDELKKYEKE 159
[189][TOP]
>UniRef100_B8INK3 Ribosome-recycling factor n=1 Tax=Methylobacterium nodulans ORS
2060 RepID=RRF_METNO
Length = 187
Score = 106 bits (264), Expect = 9e-22
Identities = 56/149 (37%), Positives = 93/149 (62%), Gaps = 2/149 (1%)
Frame = +1
Query: 16 ANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLS 195
A+ +M+ A++AL +L LRTGRASP +LD I +E G +P+ ++A +SV +P+ LS
Sbjct: 9 ADLKRRMQGAVNALKHDLGSLRTGRASPTLLDPIQIEAYGAVMPMAQVATISVPEPRLLS 68
Query: 196 VNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQ 375
V +D + +E AI S LGLNP +G+ + IP ++++ + M K+ K E+AR
Sbjct: 69 VAVWDRGMVSAVEKAIRESDLGLNPMTEGQTIRLRIPEMSEQRRKEMVKVAHKYAEEARV 128
Query: 376 SIRRARQKAMDAIKKL--NSSLPKDDIKR 456
++R R+ +D +KKL + ++ +DD KR
Sbjct: 129 AVRHVRRDGLDLLKKLEKDGAISQDDEKR 157
[190][TOP]
>UniRef100_A9AIL7 Ribosome-recycling factor n=4 Tax=Burkholderia multivorans
RepID=RRF_BURM1
Length = 186
Score = 106 bits (264), Expect = 9e-22
Identities = 53/151 (35%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK +M+ +I A +L+K+RTGRA G+LDH+ V+ G +P+ ++A ++++D +T
Sbjct: 6 IKKGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+ V P++ + ++E AI + LGLNP G+ + +PPLT+E + + K+V E A
Sbjct: 66 IGVQPWEKNMVAKVEKAIREADLGLNPATAGDLIRVPMPPLTEERRRELTKVVKGEGETA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKR 456
+ +IR R+ A +A+KKL + + +DD +R
Sbjct: 126 KVAIRNLRRDANEALKKLVKDKEISEDDERR 156
[191][TOP]
>UniRef100_A0LV51 Ribosome-recycling factor n=1 Tax=Acidothermus cellulolyticus 11B
RepID=RRF_ACIC1
Length = 185
Score = 106 bits (264), Expect = 9e-22
Identities = 58/151 (38%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
Frame = +1
Query: 22 AVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVN 201
A +ME A + + +RTGRA+P + I VE G PL ++A +V D + + ++
Sbjct: 9 AEEKMEKATNVARENFAAIRTGRANPALFSKITVEYYGTPTPLNQLASFTVADARLIVIH 68
Query: 202 PYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSI 381
PYD +L+ +E AI S LG+NP DG + AIPPLT+E + K+ E+AR +I
Sbjct: 69 PYDKGSLRAIEKAIRDSDLGVNPTDDGSVIRVAIPPLTEERRRDYIKMARHEAEEARVAI 128
Query: 382 RRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R R+ A DA+ KL + + +DD++R EKE
Sbjct: 129 RNIRRHAKDALDKLQKDGEVGEDDVRRAEKE 159
[192][TOP]
>UniRef100_UPI0000E87DA8 ribosome releasing factor n=1 Tax=Methylophilales bacterium
HTCC2181 RepID=UPI0000E87DA8
Length = 184
Score = 105 bits (263), Expect = 1e-21
Identities = 58/155 (37%), Positives = 95/155 (61%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
+K N ++M+ +I AL LSK+RTGRA G+LDHI V+ G + L ++A V++ D T
Sbjct: 4 LKKNTRNKMQNSIDALKGNLSKIRTGRAHTGVLDHINVDYYGSQTALNQVAGVTLGDATT 63
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+++ PY+ + +E AI S LGLNP G+ + +PPLT+E + + K+V E+
Sbjct: 64 INIQPYEKTMIAVIEKAIRESDLGLNPATSGDLIRVPMPPLTEERRKDLIKVVKSEGENT 123
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ +IR R+ A +A+KKL + +DD +R ++E
Sbjct: 124 KIAIRNVRRDANEALKKLTKEKEISEDDERRAQEE 158
[193][TOP]
>UniRef100_A7MGS9 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC
BAA-894 RepID=A7MGS9_ENTS8
Length = 173
Score = 105 bits (263), Expect = 1e-21
Identities = 57/147 (38%), Positives = 90/147 (61%), Gaps = 2/147 (1%)
Frame = +1
Query: 34 MEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYDP 213
M+ + A T++SK+RTGRASP +LD I+VE G PL ++A V+V D +TL +N +D
Sbjct: 1 MDKCVEAFKTQISKVRTGRASPSLLDGIVVEYYGTPTPLRQLANVTVEDSRTLKINVFDR 60
Query: 214 QTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRAR 393
+E AI++S LGLNP + G + +PPLT+E + + K+V E AR +IR R
Sbjct: 61 SMGPAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLIKVVRGEAEQARVAIRNVR 120
Query: 394 QKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ A D +K L + + +D+ +R + +
Sbjct: 121 RDANDKVKALLKDKEIGEDEDRRSQDD 147
[194][TOP]
>UniRef100_C9YA46 Ribosome-recycling factor n=1 Tax=Curvibacter putative symbiont of
Hydra magnipapillata RepID=C9YA46_9BURK
Length = 186
Score = 105 bits (263), Expect = 1e-21
Identities = 56/155 (36%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK ++M+ +I++L L+K+RTGRA+P +LD + V+ G +PL ++A +S+ID +T
Sbjct: 6 IKKTLDAKMDQSIASLKNNLTKIRTGRANPALLDTVHVDYYGSMVPLSQVANLSLIDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+SV P++ ++E AI S LGLNP + GE + +P +T+E + + K+V E A
Sbjct: 66 ISVQPWEKNMAPKIEKAIRDSDLGLNPSSMGELIRVPMPAMTEERRKELTKVVRGEGEGA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ ++R R+ A +A+K+L + +DD KR E +
Sbjct: 126 KVAVRNLRRDANEAVKRLVKDKLASEDDQKRCEAD 160
[195][TOP]
>UniRef100_C8NTV7 Ribosome recycling factor n=1 Tax=Corynebacterium genitalium ATCC
33030 RepID=C8NTV7_9CORY
Length = 185
Score = 105 bits (263), Expect = 1e-21
Identities = 55/152 (36%), Positives = 90/152 (59%), Gaps = 2/152 (1%)
Frame = +1
Query: 19 NAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSV 198
+A +M ++ EL +RTGRA+P M + ++ E G P+ ++A +SV +P+ L +
Sbjct: 8 DAEERMTNSVEHTRGELVTIRTGRANPAMFNSVMAEFYGAPTPINQMATISVPEPRMLLI 67
Query: 199 NPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQS 378
PYDP T+ ++ENAI +S LG+NP DG+ + IP LT+E + + K ED + +
Sbjct: 68 KPYDPSTMGEIENAIRNSDLGVNPTDDGQVIRVTIPQLTEERRRDLVKQAKGKGEDGKIA 127
Query: 379 IRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
IR R+ MDA+KK+ + +D++ EKE
Sbjct: 128 IRNVRRSGMDALKKIQKDGDAGEDEVSAAEKE 159
[196][TOP]
>UniRef100_C6PQY0 Ribosome recycling factor n=1 Tax=Clostridium carboxidivorans P7
RepID=C6PQY0_9CLOT
Length = 185
Score = 105 bits (263), Expect = 1e-21
Identities = 57/155 (36%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I A +M + AL EL+ ++ GRA+P MLD I E G P+ ++A +SV +P+
Sbjct: 5 IMKKADEKMNKTVEALKRELASMKAGRANPAMLDKIEAEYYGTMTPINQLANISVPEPRV 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L++ P+D + K +E AI+ S LG+NP +DGE + I LT+E + + K + K ED+
Sbjct: 65 LAIQPWDKGSFKAIEKAILKSDLGINPSSDGEMIRLVIAELTEETRKNIVKNIKKDGEDS 124
Query: 370 RQSIRRARQKAMDAIK--KLNSSLPKDDIKRLEKE 468
+ ++R R+ D IK K S + +D+IK+ E E
Sbjct: 125 KVAVRSIRRDCNDKIKVLKKESDISEDEIKKAEDE 159
[197][TOP]
>UniRef100_C0WKJ9 Ribosome recycling factor n=1 Tax=Corynebacterium accolens ATCC
49725 RepID=C0WKJ9_9CORY
Length = 185
Score = 105 bits (263), Expect = 1e-21
Identities = 56/155 (36%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ A M A++ +L +RTGRA+P M + +I E G P+ ++A +SV +P+
Sbjct: 5 IQLEAEEHMTASVEHTREQLVTIRTGRANPAMFNGLIAEYYGAPTPITQMATISVPEPRM 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L + PY+ ++++EN+I +S LG+NP DG L +P LT+E + M KL ED
Sbjct: 65 LLIKPYEQSMIQEIENSIRNSDLGVNPTNDGHVLRVTVPQLTEERRKEMVKLAKSKGEDG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ +IR R+KAM+ +KKL + +D++ EKE
Sbjct: 125 KIAIRNIRRKAMEQLKKLQKDGEEGEDEVLAAEKE 159
[198][TOP]
>UniRef100_A8UCW3 Ribosome recycling factor n=1 Tax=Carnobacterium sp. AT7
RepID=A8UCW3_9LACT
Length = 185
Score = 105 bits (263), Expect = 1e-21
Identities = 54/142 (38%), Positives = 88/142 (61%), Gaps = 2/142 (1%)
Frame = +1
Query: 49 SALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYDPQTLKQ 228
SAL EL +R GRA+ G+LD I V G PL ++A +SV +P+ L + P+D ++
Sbjct: 18 SALQRELGTIRAGRANAGLLDRINVVYYGAPTPLKQLAQISVPEPRVLMITPFDKTSISD 77
Query: 229 LENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRARQKAMD 408
+E +I+ S LG++P DG + IP LT+E + + K V K E+A+ S+R R++AMD
Sbjct: 78 IEKSIMQSDLGISPANDGNVIRLVIPQLTEERRKELAKKVGKEAENAKVSVRNIRREAMD 137
Query: 409 AIKKL--NSSLPKDDIKRLEKE 468
+KK N+ + +DD++ E++
Sbjct: 138 ELKKAEKNNEITQDDLRTFEED 159
[199][TOP]
>UniRef100_A3K1T2 Ribosome recycling factor n=1 Tax=Sagittula stellata E-37
RepID=A3K1T2_9RHOB
Length = 186
Score = 105 bits (263), Expect = 1e-21
Identities = 55/146 (37%), Positives = 89/146 (60%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+ME A+ +L TE + LRTGRAS ML+ I+V+ G P+ ++ V+V +P+ +++N +D
Sbjct: 15 RMEGAMGSLRTEFASLRTGRASGSMLEPIMVDAYGAMTPINQVGTVNVPEPRMVTINVWD 74
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
+ ++E AI S LG+NP+ +G ++ IP L +E + ++K+ + E AR SIR
Sbjct: 75 KSLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELSKVAGQYAEHARVSIRNI 134
Query: 391 RQKAMDAIKKLNSSLPKDDIKRLEKE 468
R+ MD IKK + +DD K E E
Sbjct: 135 RRDGMDQIKKHKDDMSEDDAKLWESE 160
[200][TOP]
>UniRef100_Q136A7 Ribosome-recycling factor n=1 Tax=Rhodopseudomonas palustris BisB5
RepID=RRF_RHOPS
Length = 187
Score = 105 bits (263), Expect = 1e-21
Identities = 61/148 (41%), Positives = 89/148 (60%), Gaps = 2/148 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+M A AL EL LRTGRAS ML+ + V+ G +PL ++A VSV +P+ LSV +D
Sbjct: 14 RMHGASQALQHELGGLRTGRASASMLEPVQVDAYGTHMPLNQVATVSVPEPRLLSVQVWD 73
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
+K +E AIV S LGL+P +G+ L IP L ++ + + K+ K E AR ++R
Sbjct: 74 KSMVKAVEKAIVDSNLGLSPATEGQVLRLRIPELNQDRRKELVKVAHKYAEAARVAVRHV 133
Query: 391 RQKAMDAIKKLNSS--LPKDDIKRLEKE 468
R+ +D IKKL + + +DD KRL+ E
Sbjct: 134 RRDGLDIIKKLEKAHEISEDDQKRLDHE 161
[201][TOP]
>UniRef100_A9BMM9 Ribosome-recycling factor n=1 Tax=Delftia acidovorans SPH-1
RepID=RRF_DELAS
Length = 186
Score = 105 bits (263), Expect = 1e-21
Identities = 57/155 (36%), Positives = 95/155 (61%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK S+M +I AL L+++RTGRA+P +LD I V+ G +PL ++A V+++D +T
Sbjct: 6 IKKTTESKMGQSIEALKNNLARVRTGRANPSLLDSIHVDYYGSMVPLSQVANVNLLDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+SV P++ ++E AI S LGLNP + G+ + +PP+++E + M KL E +
Sbjct: 66 ISVQPWEKSMSAKVEKAIRESDLGLNPASLGDLIRVPMPPMSEERRKEMTKLARNEGEAS 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ ++R R+ A +A+KKL + +DD KR E +
Sbjct: 126 KIAVRNLRRDANEAVKKLVKDKEASEDDQKRCEAD 160
[202][TOP]
>UniRef100_P61303 Ribosome-recycling factor n=1 Tax=Corynebacterium diphtheriae
RepID=RRF_CORDI
Length = 185
Score = 105 bits (263), Expect = 1e-21
Identities = 55/151 (36%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
Frame = +1
Query: 22 AVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVN 201
A M ++ EL +RTGRA+P M + +I + GV P+ ++A +SV + + L +
Sbjct: 9 AEEHMNTSVERTRDELVNIRTGRANPAMFNGVIADYYGVPTPITQMATISVPEARMLLIK 68
Query: 202 PYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSI 381
PY+ + ++ENAI +S LG+NP DG+ L IP LT+E + M KL ED + +I
Sbjct: 69 PYEMSMMNEIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRRDMAKLAKSKGEDGKIAI 128
Query: 382 RRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R R+K MD +KK+ + +D+++ EKE
Sbjct: 129 RNVRRKGMDQLKKIQKDGDAGEDEVQAAEKE 159
[203][TOP]
>UniRef100_A9WAG2 Ribosome-recycling factor n=2 Tax=Chloroflexus RepID=RRF_CHLAA
Length = 185
Score = 105 bits (263), Expect = 1e-21
Identities = 53/145 (36%), Positives = 90/145 (62%), Gaps = 2/145 (1%)
Frame = +1
Query: 28 SQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPY 207
+ ++ A AL L+ +RTGRAS +++H+ VE G+ +PL ++A +SV +P+ + + PY
Sbjct: 11 AHLKKATEALRHHLASIRTGRASSALVEHLHVEAYGMTMPLNQLANISVPEPRLIVIQPY 70
Query: 208 DPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRR 387
D +K +E AI S LGLNP DG + +PPLT+E + + K+V E+ + S+R
Sbjct: 71 DANMIKAIEKAIQQSDLGLNPSNDGRVIRLPVPPLTEERRRELVKMVRHRVEEVKISVRN 130
Query: 388 ARQKAMDAIKKLNSS--LPKDDIKR 456
R+ A+D +KKL + + +D++ R
Sbjct: 131 QRRDAIDDLKKLEAEKLISEDELHR 155
[204][TOP]
>UniRef100_B8GWS0 Ribosome-recycling factor n=2 Tax=Caulobacter vibrioides
RepID=RRF_CAUCN
Length = 188
Score = 105 bits (263), Expect = 1e-21
Identities = 57/148 (38%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+M+ A+SAL E LRTGRAS +LD ++VE G PL +A VSV +P+ ++V+ +D
Sbjct: 15 RMDKAVSALKEEFGSLRTGRASASLLDQVMVEAYGSTTPLNAVASVSVPEPRQINVSVWD 74
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
+ +E AI +S LGLNP +G+ L IPPLT+E + + K+ K E + ++R
Sbjct: 75 RGVVVSVEKAIRASGLGLNPVVEGQNLRIPIPPLTEERRRDLQKIAGKYAEQQKIAVRNV 134
Query: 391 RQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R+ A D +KK + ++ +D+ K++E E
Sbjct: 135 RRDANDDLKKAEKDGAIAEDERKKMETE 162
[205][TOP]
>UniRef100_UPI000196DCEF hypothetical protein NEICINOT_00392 n=1 Tax=Neisseria cinerea ATCC
14685 RepID=UPI000196DCEF
Length = 185
Score = 105 bits (262), Expect = 2e-21
Identities = 57/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ A S+M+ ++ L L+K+RTGRA G+LD + VE G +P+ ++A V+++D +T
Sbjct: 5 IQKTAESKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDART 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+ V P++ ++E AI S LGLNP A G+ + +P LT+E + + K+V E+
Sbjct: 65 IGVKPFESNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRSEAEEG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEK 465
R SIR R+ A D IKKL + + +D+ +R E+
Sbjct: 125 RVSIRNVRRDANDHIKKLLKDKEISEDEARRGEE 158
[206][TOP]
>UniRef100_UPI0001844878 hypothetical protein PROVRUST_01168 n=1 Tax=Providencia rustigianii
DSM 4541 RepID=UPI0001844878
Length = 185
Score = 105 bits (262), Expect = 2e-21
Identities = 58/155 (37%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A +ME ++ AL +++SK+RTGRASP +LD I+VE G PL ++A V+V D +T
Sbjct: 5 IQKDAQDRMEKSLEALKSQISKIRTGRASPSLLDGIVVEYYGSATPLRQLANVTVEDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L+++ +D +E AI++S LGLNP + G + +P LT+E + + K+V E
Sbjct: 65 LAISVFDRSMSPAIEKAIMASDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRGEAEQG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R +IR R+ A D +K L + + +DD +R + +
Sbjct: 125 RIAIRNVRRDANDKVKALLKDKEISEDDERRSQDD 159
[207][TOP]
>UniRef100_UPI00016A5D8B ribosome recycling factor n=1 Tax=Burkholderia ubonensis Bu
RepID=UPI00016A5D8B
Length = 186
Score = 105 bits (262), Expect = 2e-21
Identities = 51/151 (33%), Positives = 93/151 (61%), Gaps = 2/151 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
+K +M+ +I A +L+K+RTGRA G+LDH+ V+ G +P+ ++A ++++D +T
Sbjct: 6 VKKGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+ V P++ + ++E AI + LGLNP G+ + +PPLT+E + + K+V E A
Sbjct: 66 IGVQPWEKNMVAKVEKAIREADLGLNPATSGDLIRVPMPPLTEERRRELTKVVKSEGETA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKR 456
+ +IR R+ A + +KKL + + +DD +R
Sbjct: 126 KVAIRNLRRDANEQLKKLVKDKEISEDDERR 156
[208][TOP]
>UniRef100_B5EQQ1 Ribosome recycling factor n=2 Tax=Acidithiobacillus ferrooxidans
RepID=B5EQQ1_ACIF5
Length = 186
Score = 105 bits (262), Expect = 2e-21
Identities = 55/155 (35%), Positives = 100/155 (64%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK ++ ++M+ +I +L EL++LRTGRAS G+LDH+ ++ G PL ++A VSV D ++
Sbjct: 6 IKKDSEARMKKSIESLKGELTRLRTGRASAGLLDHVQLDYYGAPTPLAQVASVSVADARS 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L V P++ + +++ AI + LGLNP A + + +P L++E + M K+V + E A
Sbjct: 66 LLVTPWEKNLIPKIDKAIRDAGLGLNPVAGSDNVRVPLPALSEERRKEMVKVVRQEGEGA 125
Query: 370 RQSIRRARQKAMDAIKKLN--SSLPKDDIKRLEKE 468
R +IR R+ ++ +K+L+ ++ +D+ +R E+E
Sbjct: 126 RVAIRNIRRDSISQVKELHKQKAISEDEERRAEEE 160
[209][TOP]
>UniRef100_A9B455 Ribosome recycling factor n=1 Tax=Herpetosiphon aurantiacus ATCC
23779 RepID=A9B455_HERA2
Length = 192
Score = 105 bits (262), Expect = 2e-21
Identities = 56/152 (36%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = +1
Query: 19 NAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSV 198
+A S+M+ +I +L L +RTGRASP +++ + VE G ++PL ++A ++ + + +++
Sbjct: 15 DAESKMKKSIDSLRHTLGAVRTGRASPALVEDLKVEYYGSEMPLNQLANIATPESRMITI 74
Query: 199 NPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQS 378
PYD +K +E AI +S LG+NP DG + AIP LT+E + + K V ED + +
Sbjct: 75 QPYDQGAIKAIEKAIQNSELGINPSNDGRVIRLAIPQLTQERRKELVKQVKAKVEDGKVA 134
Query: 379 IRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
IR R++A DAI+KL + ++ +DD +R ++E
Sbjct: 135 IRNVRREAQDAIRKLQQDKAISEDDERRGQEE 166
[210][TOP]
>UniRef100_C6M673 Ribosome recycling factor n=1 Tax=Neisseria sicca ATCC 29256
RepID=C6M673_NEISI
Length = 185
Score = 105 bits (262), Expect = 2e-21
Identities = 57/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ A S+M+ ++ L L+K+RTGRA G+LD + VE G +P+ ++A V+++D +T
Sbjct: 5 IQKTAESKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDART 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+ V P++ ++E AI S LGLNP A G+ + +P LT+E + + K+V E+
Sbjct: 65 IGVKPFESNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRSEAEEG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEK 465
R SIR R+ A D IKKL + + +D+ +R E+
Sbjct: 125 RVSIRNVRRDANDHIKKLLKDKEISEDEARRGEE 158
[211][TOP]
>UniRef100_C0VVD0 Ribosome recycling factor n=2 Tax=Corynebacterium glucuronolyticum
RepID=C0VVD0_9CORY
Length = 185
Score = 105 bits (262), Expect = 2e-21
Identities = 56/151 (37%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Frame = +1
Query: 22 AVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVN 201
A +MEA + ELS +RTGRA+P M + +I E G P+ ++A +SV +P+ L +
Sbjct: 9 ADERMEATVDHTREELSHIRTGRANPSMFNGVIAEFYGQPTPINQMATISVPEPRMLLIK 68
Query: 202 PYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSI 381
PYD ++ +E AI +S LG+NP DG+ L +P LT+E + M K+ E+ + +I
Sbjct: 69 PYDMNSMDDIERAIRNSDLGVNPTNDGQVLRVTVPQLTEERRREMVKVAKSKGEEGKIAI 128
Query: 382 RRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R R+K MD +KK+ + +D+++ EKE
Sbjct: 129 RNIRRKGMDQLKKIQKDGDAGEDEVQAGEKE 159
[212][TOP]
>UniRef100_B6XDN1 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens
DSM 30120 RepID=B6XDN1_9ENTR
Length = 185
Score = 105 bits (262), Expect = 2e-21
Identities = 58/155 (37%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A +ME ++ +L +++SK+RTGRASP +LD I VE G PL ++A V+V D +T
Sbjct: 5 IQKDAQDRMEKSLESLKSQISKVRTGRASPSLLDGITVEYYGSATPLRQLANVTVEDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L+++ +D +E AI++S LGLNP + G + +PPLT+E + + K+V E
Sbjct: 65 LAISVFDRSMSPAIEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRGDAEQG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R +IR R+ A D +K L + + +DD +R + +
Sbjct: 125 RIAIRNVRRDANDKVKALLKDKEISEDDERRSQDD 159
[213][TOP]
>UniRef100_B5WL53 Ribosome recycling factor n=1 Tax=Burkholderia sp. H160
RepID=B5WL53_9BURK
Length = 186
Score = 105 bits (262), Expect = 2e-21
Identities = 54/151 (35%), Positives = 93/151 (61%), Gaps = 2/151 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ A +M+ +I A +LSK+RTGRA G+LDHI + G +P+ ++A +++ID +T
Sbjct: 6 IRKGAEQKMQRSIDAFKNDLSKIRTGRAHTGLLDHIQCDYYGSPVPISQVANLTLIDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+ V P++ + ++ +E AI S LGLNP G+ + +P LT+E + + K+V E A
Sbjct: 66 IGVQPWEKKMVQVVEKAIRESELGLNPATHGDVIRVPMPALTEERRRELTKVVRSEAETA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKR 456
R ++R R+ A + +KKL + + +DD +R
Sbjct: 126 RVAVRNLRRDANEQLKKLVKDKEISEDDERR 156
[214][TOP]
>UniRef100_A3S0G5 Ribosome Recycling Factor (RRF) n=3 Tax=Ralstonia solanacearum
RepID=A3S0G5_RALSO
Length = 186
Score = 105 bits (262), Expect = 2e-21
Identities = 53/151 (35%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
+K +A +M+ +I A +L+K+RTGRA G+LDH+ V+ G +P+ ++A V + D +T
Sbjct: 6 VKKSAEQKMQKSIDAFKADLAKVRTGRAHAGLLDHVQVDYYGSMVPISQVANVGLADART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+SV P++ + + +E AI + LGLNP G+ + +P LT+E + + K+V EDA
Sbjct: 66 ISVQPWEKKLVSAVEKAIREADLGLNPATMGDVIRVPMPALTEERRKELTKVVKSEGEDA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKR 456
+ ++R R+ A + KKL + ++ +DD +R
Sbjct: 126 KVAVRNVRRDANEQFKKLVKDKAISEDDERR 156
[215][TOP]
>UniRef100_A0KZ20 Ribosome-recycling factor n=1 Tax=Shewanella sp. ANA-3
RepID=RRF_SHESA
Length = 185
Score = 105 bits (262), Expect = 2e-21
Identities = 59/155 (38%), Positives = 89/155 (57%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK +A +M + A +++K+RTGRA P +LD I V G PL ++A V + D +T
Sbjct: 5 IKKDAQERMGKCVEATKNQMAKVRTGRAHPSLLDSIQVSYYGTMTPLNQVANVGIEDART 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
LSV +D ++ +E AI+SS LGLNP + G L +P LT+E + K+V E
Sbjct: 65 LSVTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRAEAEGG 124
Query: 370 RQSIRRARQKAMDAIKKLNSS--LPKDDIKRLEKE 468
R +IR R+ A+ +KKL + +DD++R E E
Sbjct: 125 RVAIRNVRRDAISEVKKLEKAKECTEDDVRRFEDE 159
[216][TOP]
>UniRef100_Q8EGH2 Ribosome-recycling factor n=1 Tax=Shewanella oneidensis
RepID=RRF_SHEON
Length = 185
Score = 105 bits (262), Expect = 2e-21
Identities = 60/155 (38%), Positives = 89/155 (57%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK +A +M + A +++K+RTGRA P +LD I V G PL ++A V V D +T
Sbjct: 5 IKKDAQERMGKCVDATKNQMAKVRTGRAHPSLLDSIQVSYYGTMTPLNQVANVGVEDART 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
LSV +D ++ +E AI+SS LGLNP + G L +P LT+E + K+V E
Sbjct: 65 LSVTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRAEAEGG 124
Query: 370 RQSIRRARQKAMDAIKKLNSS--LPKDDIKRLEKE 468
R +IR R+ A+ +KKL + +DD++R E E
Sbjct: 125 RVAIRNVRRDAISDVKKLEKAKECTEDDVRRFEDE 159
[217][TOP]
>UniRef100_A8EXM3 Ribosome-recycling factor n=1 Tax=Rickettsia canadensis str. McKiel
RepID=RRF_RICCK
Length = 186
Score = 105 bits (262), Expect = 2e-21
Identities = 61/156 (39%), Positives = 90/156 (57%), Gaps = 2/156 (1%)
Frame = +1
Query: 7 TIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPK 186
T+K N +ME A+ L EL LRTGRAS +LD +IVE G KIPL ++A +S D +
Sbjct: 5 TLKKNLQEKMEKALKVLDHELKGLRTGRASVNLLDSVIVEAYGSKIPLSQVASISTPDAR 64
Query: 187 TLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCED 366
T++V +D + +E I + LGL P DG+ + IP LT+E + + KL K ED
Sbjct: 65 TINVQVWDKSMVSLVEKGITIANLGLTPATDGQLIRLPIPILTEERRKELVKLAHKYGED 124
Query: 367 ARQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ S+R R+ + +KKL N+ L KD+ L ++
Sbjct: 125 TKISLRNIRRDGNEELKKLEKNNILTKDEHHSLSEQ 160
[218][TOP]
>UniRef100_B4RBZ1 Ribosome-recycling factor n=1 Tax=Phenylobacterium zucineum HLK1
RepID=RRF_PHEZH
Length = 188
Score = 105 bits (262), Expect = 2e-21
Identities = 57/148 (38%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+M+ A++AL E LRTGRAS +LD I V+ G +PL ++A VSV +P+ ++VN +D
Sbjct: 15 RMDKAVAALKEEFGSLRTGRASASLLDQIHVDAYGSSMPLTQVAAVSVPEPRMITVNVWD 74
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
+ +E AI S LGLNP DG+ L IPPLT+E + + K+ + E R ++R
Sbjct: 75 RGMVVSVEKAIRQSDLGLNPVVDGQTLRIPIPPLTEERRKDLAKIAGRYAEQQRVAVRNI 134
Query: 391 RQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R+ A + ++K ++ + +D+ KR+E E
Sbjct: 135 RRDANEDLRKAQKDNVISQDEEKRMETE 162
[219][TOP]
>UniRef100_Q3SRH5 Ribosome-recycling factor n=1 Tax=Nitrobacter winogradskyi Nb-255
RepID=RRF_NITWN
Length = 187
Score = 105 bits (262), Expect = 2e-21
Identities = 59/148 (39%), Positives = 89/148 (60%), Gaps = 2/148 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+M+ A +L EL LRTGRAS MLD + V+ G +PL ++A +SV +P+ LSV +D
Sbjct: 14 RMQGATQSLKHELGGLRTGRASSSMLDPVQVDAYGSHMPLNQVATISVPEPRLLSVQVWD 73
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
+K +E AIV S LGL+P +G+ L IP L +E + + K+ K E A+ ++R
Sbjct: 74 KSMVKAVEKAIVDSNLGLSPATEGQVLRLRIPELNEERRKELVKVAHKYAEAAKVAVRHV 133
Query: 391 RQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R+ +D +KKL N + +DD KRL +
Sbjct: 134 RRDGLDTLKKLEKNHEISEDDEKRLAND 161
[220][TOP]
>UniRef100_B0UPZ4 Ribosome-recycling factor n=1 Tax=Methylobacterium sp. 4-46
RepID=RRF_METS4
Length = 187
Score = 105 bits (262), Expect = 2e-21
Identities = 56/149 (37%), Positives = 92/149 (61%), Gaps = 2/149 (1%)
Frame = +1
Query: 16 ANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLS 195
A+ +M+ A+++L +L LRTGRASP +LD I VE G +P+ ++A +SV +P+ LS
Sbjct: 9 ADIKRRMQGAVNSLKHDLGSLRTGRASPTLLDPIQVEAYGAAMPMAQVATISVPEPRLLS 68
Query: 196 VNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQ 375
V +D + +E AI S LGLNP +G+ + IP + ++ + M K+ K E+AR
Sbjct: 69 VAVWDRGMVSAVEKAIRESDLGLNPMTEGQTIRLRIPEMNEQRRKEMVKVAHKYAEEARV 128
Query: 376 SIRRARQKAMDAIKKL--NSSLPKDDIKR 456
++R R+ +D +KKL + ++ +DD KR
Sbjct: 129 AVRHVRRDGLDLLKKLEKDGAISQDDEKR 157
[221][TOP]
>UniRef100_B2VE11 Ribosome-recycling factor n=1 Tax=Erwinia tasmaniensis
RepID=RRF_ERWT9
Length = 185
Score = 105 bits (262), Expect = 2e-21
Identities = 58/155 (37%), Positives = 93/155 (60%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK +A ++ME + A +SK+RTGRASP +LD I+V+ G PL ++A V+V D +T
Sbjct: 5 IKKDAETRMEKCVEAFRNHISKIRTGRASPSILDGIMVDYYGSATPLRQLASVTVEDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L +N +D +E AI++S LGLNP + G + +P LT+E + + K+V E
Sbjct: 65 LKINVFDRSIGAAVEKAIMTSDLGLNPSSAGSDIRVPLPALTEERRKDLIKVVRGEAEQG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R S+R R+ A D +K L + + +DD +R +++
Sbjct: 125 RVSVRNVRRDANDKLKALLKDKEISEDDDRRAQED 159
[222][TOP]
>UniRef100_B8G461 Ribosome-recycling factor n=1 Tax=Chloroflexus aggregans DSM 9485
RepID=RRF_CHLAD
Length = 185
Score = 105 bits (262), Expect = 2e-21
Identities = 53/145 (36%), Positives = 89/145 (61%), Gaps = 2/145 (1%)
Frame = +1
Query: 28 SQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPY 207
+ ++ A AL L+ +RTGRAS +++H+ VE G +PL ++A +SV +P+ + + PY
Sbjct: 11 AHLKKATEALRHHLASIRTGRASAALVEHLHVEAYGTNMPLNQLANISVPEPRMIIIQPY 70
Query: 208 DPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRR 387
D +K +E AI S LGLNP DG + +PPLT+E + + K+V E+ + S+R
Sbjct: 71 DTGMIKAIEKAIQQSDLGLNPSNDGRIIRLPVPPLTEERRRELVKMVRHRVEEVKVSVRN 130
Query: 388 ARQKAMDAIKKLNSS--LPKDDIKR 456
R+ A+D +KKL + + +D++ R
Sbjct: 131 QRRDAIDDLKKLEADKLISEDELHR 155
[223][TOP]
>UniRef100_Q39F46 Ribosome-recycling factor n=1 Tax=Burkholderia sp. 383
RepID=RRF_BURS3
Length = 186
Score = 105 bits (262), Expect = 2e-21
Identities = 52/150 (34%), Positives = 94/150 (62%), Gaps = 2/150 (1%)
Frame = +1
Query: 13 KANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTL 192
K +M+ +I A ++L+K+RTGRA GMLDH+ V+ G +P+ ++A ++++D +T+
Sbjct: 7 KKGVEQKMQRSIDAFKSDLAKIRTGRAHTGMLDHVQVDYYGSMVPISQVANMTLVDARTI 66
Query: 193 SVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDAR 372
V P++ + ++E AI + LGLNP G+++ +P LT+E + + K+V E A+
Sbjct: 67 GVQPWEKPMVAKVEKAIREADLGLNPATSGDQIRVPMPALTEERRRELTKVVKSEGETAK 126
Query: 373 QSIRRARQKAMDAIKKL--NSSLPKDDIKR 456
+IR R+ A +A+KKL + + +DD +R
Sbjct: 127 VAIRNLRRDANEALKKLVKDKEISEDDERR 156
[224][TOP]
>UniRef100_A3MKU0 Ribosome-recycling factor n=23 Tax=pseudomallei group
RepID=RRF_BURM7
Length = 186
Score = 105 bits (262), Expect = 2e-21
Identities = 51/151 (33%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK + +M+ +I A +L+K+RTGRA G+LDH+ V+ G +P+ ++A ++++D +T
Sbjct: 6 IKKSVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+ V P++ + ++E AI + LGLNP G+ + +PPLT+E + + K+V E A
Sbjct: 66 IGVQPWEKTMVAKVEKAIREADLGLNPATSGDLIRVPMPPLTEERRRELTKVVKSEGETA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKR 456
+ ++R R+ A + +KKL + + +DD +R
Sbjct: 126 KVAVRNLRRDANEQLKKLVKDKEISEDDERR 156
[225][TOP]
>UniRef100_A7GRF4 Ribosome-recycling factor n=1 Tax=Bacillus cytotoxicus NVH 391-98
RepID=RRF_BACCN
Length = 185
Score = 105 bits (262), Expect = 2e-21
Identities = 55/153 (35%), Positives = 93/153 (60%), Gaps = 2/153 (1%)
Frame = +1
Query: 1 GPTIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVID 180
G + ++ +ME A++A S EL+ +R GRAS +LD + V+ G P+V++A ++V +
Sbjct: 2 GQQVIKSSTEKMEKAVAAYSRELATVRAGRASASILDKVQVDYYGAPTPVVQLANITVPE 61
Query: 181 PKTLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSC 360
+ L + PYD ++ +E AI+ + LGLNP DG + A P LT+E + + K+V K
Sbjct: 62 ARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGSVIRIAFPALTEERRRELVKVVKKYA 121
Query: 361 EDARQSIRRARQKAMDAIKKLNSS--LPKDDIK 453
EDA+ +IR R+ D +KKL + + +DD++
Sbjct: 122 EDAKVAIRNVRRDGNDELKKLEKAGEMTEDDLR 154
[226][TOP]
>UniRef100_UPI000196D4FA hypothetical protein NEIMUCOT_00934 n=1 Tax=Neisseria mucosa ATCC
25996 RepID=UPI000196D4FA
Length = 185
Score = 105 bits (261), Expect = 2e-21
Identities = 57/154 (37%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ A S+M+ ++ L L+K+RTGRA G+LD + VE G +P+ ++A V+++D +T
Sbjct: 5 IQKTAESKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDART 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+ V P++ ++E AI S LGLNP A G+ + +P LT+E + + K+V E+
Sbjct: 65 IGVKPFESNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRSEAEEG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEK 465
R SIR R+ A D IKKL + +D+ +R E+
Sbjct: 125 RVSIRNVRRDANDHIKKLLKEKEISEDEARRGEE 158
[227][TOP]
>UniRef100_C5S7M7 Ribosome recycling factor n=1 Tax=Allochromatium vinosum DSM 180
RepID=C5S7M7_CHRVI
Length = 185
Score = 105 bits (261), Expect = 2e-21
Identities = 54/151 (35%), Positives = 92/151 (60%), Gaps = 2/151 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK +A +M ++ +L+ EL+K+RTGRA P +LDHI+V G +P+ ++A ++ D +T
Sbjct: 5 IKQDAAERMAKSVESLTHELAKIRTGRAHPSLLDHIMVSYYGQDVPIRQVANINAEDART 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L V P++ ++ +E AI+ S LGLNP G + +PPLT+E + + K+ E A
Sbjct: 65 LLVTPWERNMVQAIEKAIMQSDLGLNPNTAGTAIRVPMPPLTEERRRDLIKVARNEAEQA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKR 456
R ++R R+ A +K+L + + +DD +R
Sbjct: 125 RVAVRNIRRDANHDLKELVKDKMISEDDERR 155
[228][TOP]
>UniRef100_C3X7R5 Ribosome recycling factor n=1 Tax=Oxalobacter formigenes OXCC13
RepID=C3X7R5_OXAFO
Length = 186
Score = 105 bits (261), Expect = 2e-21
Identities = 55/155 (35%), Positives = 95/155 (61%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
+K +A +M +I +L +L+K+RTGRA G+LDH+ V+ G + ++A ++++D +T
Sbjct: 6 VKKSAEQKMNKSIESLKADLAKVRTGRAHTGILDHVEVDYYGSPTKISQVANITLLDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+SV P++ + + +E AI S LGLNP GE + P LT+E + M KLV EDA
Sbjct: 66 ISVQPWEKKMVNAIEKAIRDSDLGLNPSTMGEIIRVPTPALTEERRKEMVKLVKTEGEDA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ ++R R+ A +A+KK+ + +DD +R + +
Sbjct: 126 KVAVRNIRRDANEAVKKMVKDKECSEDDERRSQDD 160
[229][TOP]
>UniRef100_B2GWN8 Ribosome recycling factor n=1 Tax=Burkholderia pseudomallei 1655
RepID=B2GWN8_BURPS
Length = 186
Score = 105 bits (261), Expect = 2e-21
Identities = 51/151 (33%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK + +M+ +I A +L+K+RTGRA G+LDH+ V+ G +P+ ++A ++++D +T
Sbjct: 6 IKKSVEQKMQRSIEAFRNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+ V P++ + ++E AI + LGLNP G+ + +PPLT+E + + K+V E A
Sbjct: 66 IGVQPWEKTMVAKVEKAIREADLGLNPATSGDLIRVPMPPLTEERRRELTKVVKSEGETA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKR 456
+ ++R R+ A + +KKL + + +DD +R
Sbjct: 126 KVAVRNLRRDANEQLKKLVKDKEISEDDERR 156
[230][TOP]
>UniRef100_A6CSX7 Ribosome recycling factor n=1 Tax=Bacillus sp. SG-1
RepID=A6CSX7_9BACI
Length = 185
Score = 105 bits (261), Expect = 2e-21
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 2/150 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
+ +N +M AI + EL+ +R GRA+ +LD I V+ G P+ ++A +SV + +
Sbjct: 5 VMSNTKERMTKAIQTFTRELASIRAGRANASLLDKITVDYYGAPTPVNQLAGISVPEARM 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L + PYD L +E AI+ S LG+ P +DG L IP LT+E + + KLV K EDA
Sbjct: 65 LVIQPYDKSALGDIEKAIMKSDLGITPSSDGNILRIVIPQLTEERRKDLVKLVKKESEDA 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIK 453
+ +IR R+ A D KKL N + +DD++
Sbjct: 125 KVAIRNIRRDANDEFKKLEKNGDITEDDLR 154
[231][TOP]
>UniRef100_A3X100 Ribosome recycling factor n=1 Tax=Nitrobacter sp. Nb-311A
RepID=A3X100_9BRAD
Length = 187
Score = 105 bits (261), Expect = 2e-21
Identities = 59/148 (39%), Positives = 89/148 (60%), Gaps = 2/148 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+M+ A +L EL LRTGRAS MLD + V+ G +PL ++A +SV +P+ LSV +D
Sbjct: 14 RMQGATQSLKHELGGLRTGRASASMLDPVQVDAYGSHMPLNQVATISVPEPRLLSVQVWD 73
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
+K +E AIV S LGL+P +G+ L IP L +E + + K+ K E A+ ++R
Sbjct: 74 KSMVKAVEKAIVDSNLGLSPATEGQVLRLRIPELNEERRKELVKVAHKYAEAAKVAVRHV 133
Query: 391 RQKAMDAIKKLNSS--LPKDDIKRLEKE 468
R+ +D +KKL + + +DD KRL E
Sbjct: 134 RRDGLDTLKKLEKTHEISEDDEKRLANE 161
[232][TOP]
>UniRef100_A5V3G5 Ribosome-recycling factor n=1 Tax=Sphingomonas wittichii RW1
RepID=RRF_SPHWW
Length = 185
Score = 105 bits (261), Expect = 2e-21
Identities = 60/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Frame = +1
Query: 13 KANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTL 192
KA+ +M A+ AL ++L+ LRTGRAS +LD + VE G +PL + A V+ +P+ L
Sbjct: 6 KADLERRMHGAVEALKSDLTGLRTGRASVNLLDPVTVEIYGAHMPLNQAATVTAPEPRML 65
Query: 193 SVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDAR 372
SV +D + ++ AI S+ LGLNP DG+ L IP LT+E + + KL ++ E AR
Sbjct: 66 SVQVWDRSNVGPVDKAIRSAGLGLNPIVDGQTLRIPIPDLTEERRKELAKLASQYAEKAR 125
Query: 373 QSIRRARQKAMDAIK--KLNSSLPKDDIKRLEKE 468
++R R+ MD++K + + +DD KR E E
Sbjct: 126 VAVRNVRRDGMDSLKTDEKKGEIGEDDRKRRETE 159
[233][TOP]
>UniRef100_Q0HGV8 Ribosome-recycling factor n=2 Tax=Shewanella RepID=RRF_SHESM
Length = 185
Score = 105 bits (261), Expect = 2e-21
Identities = 59/155 (38%), Positives = 89/155 (57%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK +A +M + A +++K+RTGRA P +LD I V G PL ++A V + D +T
Sbjct: 5 IKKDAQERMGKCVEATKNQMAKVRTGRAHPSLLDSIQVSYYGTMTPLNQVANVGIEDART 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
LSV +D ++ +E AI+SS LGLNP + G L +P LT+E + K+V E
Sbjct: 65 LSVTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRAEAEGG 124
Query: 370 RQSIRRARQKAMDAIKKLNSS--LPKDDIKRLEKE 468
R +IR R+ A+ +KKL + +DD++R E E
Sbjct: 125 RVAIRNVRRDAISDVKKLEKAKECTEDDVRRFEDE 159
[234][TOP]
>UniRef100_Q2IW83 Ribosome-recycling factor n=1 Tax=Rhodopseudomonas palustris HaA2
RepID=RRF_RHOP2
Length = 187
Score = 105 bits (261), Expect = 2e-21
Identities = 59/148 (39%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+M+ A AL EL LRTGRA+ ML+ + V+ G +PL ++A V+V +P+ LSV +D
Sbjct: 14 RMQGASQALQHELGGLRTGRAAASMLEPVQVDAYGTHMPLNQLATVTVPEPRLLSVQVWD 73
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
++ +E AIV S LGL+P +G+ L IP L ++ + + K+ K E AR ++R
Sbjct: 74 KSMVRAVEKAIVDSNLGLSPATEGQVLRLRIPELNQDRRKELVKVAHKYAEAARVAVRHV 133
Query: 391 RQKAMDAIKKLNSS--LPKDDIKRLEKE 468
R+ +D IKKL S + +DD KRL++E
Sbjct: 134 RRDGLDTIKKLEKSHEISEDDQKRLDQE 161
[235][TOP]
>UniRef100_A1VN43 Ribosome-recycling factor n=1 Tax=Polaromonas naphthalenivorans CJ2
RepID=RRF_POLNA
Length = 186
Score = 105 bits (261), Expect = 2e-21
Identities = 54/155 (34%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK A +M+ ++ + L+K+RTGRA+PG+LD + V+ G +P+ ++A V+++D +T
Sbjct: 6 IKQQATQKMQQSLESFQHNLTKIRTGRANPGLLDTVHVDYYGSMVPISQVANVALLDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+SV+P++ ++E AI S LGLNP + G+ + +P +T+E + + K+V E A
Sbjct: 66 ISVSPWEKGMGAKIEKAIRDSDLGLNPASQGDLIRVPMPAMTEERRKELTKVVRAEGEHA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+ +IR R+ A D +KKL + +DD +R ++E
Sbjct: 126 KVAIRNLRRDANDGVKKLVKDKLASEDDERRSQEE 160
[236][TOP]
>UniRef100_A0QVE0 Ribosome-recycling factor n=1 Tax=Mycobacterium smegmatis str. MC2
155 RepID=RRF_MYCS2
Length = 185
Score = 105 bits (261), Expect = 2e-21
Identities = 53/152 (34%), Positives = 92/152 (60%), Gaps = 2/152 (1%)
Frame = +1
Query: 19 NAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSV 198
+A +ME A+S EL +RTGRA+PGM + I ++ G P+ ++A ++V + + + +
Sbjct: 8 DAEEKMEKAVSVARDELGSIRTGRANPGMFNRINIDYYGSMTPITQLASINVPEARLVVI 67
Query: 199 NPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQS 378
PY+ L+ +E+AI +S LG+NP DG + AIP LT+E + + K EDA+ S
Sbjct: 68 KPYEASQLRAIEDAIRNSDLGVNPSNDGNIIRVAIPQLTEERRRELVKQAKSKGEDAKVS 127
Query: 379 IRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
+R R+KAM+ + ++ + +D++ R EK+
Sbjct: 128 VRNIRRKAMEELSRIKKDGEAGEDEVSRAEKD 159
[237][TOP]
>UniRef100_A5ICK7 Ribosome-recycling factor n=3 Tax=Legionella pneumophila
RepID=RRF_LEGPC
Length = 185
Score = 105 bits (261), Expect = 2e-21
Identities = 55/151 (36%), Positives = 93/151 (61%), Gaps = 2/151 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK ++ +M+ I AL T++SK+RTGRA+ +LDH++V+ G PL ++A ++ D +T
Sbjct: 5 IKQDSEKRMKKTIEALHTDMSKIRTGRANASLLDHVMVDYYGSPTPLSQVANITTSDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+ V P++ + +E AI++S LGLNP G + +PPLT+E + + K+V E
Sbjct: 65 ILVTPWEKSMVAAIEKAILNSDLGLNPATAGTAIRVPMPPLTEERRKELIKVVRHEGEQG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKR 456
R SIR R+ A + +K+L ++ +DD +R
Sbjct: 125 RVSIRNIRRDANNQLKELVKEKAISEDDERR 155
[238][TOP]
>UniRef100_A0LXJ3 Ribosome-recycling factor n=1 Tax=Gramella forsetii KT0803
RepID=RRF_GRAFK
Length = 183
Score = 105 bits (261), Expect = 2e-21
Identities = 56/153 (36%), Positives = 91/153 (59%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I A ME AI+ L +LS +R G+ASP ML ++VE G + PL ++A V+ D +T
Sbjct: 7 ILEEAKEGMEKAITHLKKQLSNIRAGKASPSMLGSVMVEYYGSQTPLQQVANVNTPDART 66
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
LS+ P++ + ++E I+ + LG NP +GE +I +PPLT+E + ++K EDA
Sbjct: 67 LSIQPFEKSLITEIERGIMLANLGFNPMNNGESVIINVPPLTEERRKQLSKQAKAEAEDA 126
Query: 370 RQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKE 468
+ +R R++AM +KK + + +D +K E E
Sbjct: 127 KVGVRNDRKQAMQELKK--ADISEDLLKSSEDE 157
[239][TOP]
>UniRef100_P81101 Ribosome-recycling factor n=1 Tax=Bacillus subtilis RepID=RRF_BACSU
Length = 185
Score = 105 bits (261), Expect = 2e-21
Identities = 53/143 (37%), Positives = 90/143 (62%), Gaps = 2/143 (1%)
Frame = +1
Query: 31 QMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYD 210
+ME AI+A EL+ +R GRA+P +LD + VE G + PL +++ ++V + + L + PYD
Sbjct: 12 KMEKAIAAYQRELATVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARMLVITPYD 71
Query: 211 PQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRA 390
+ +E AI+ + LGL P +DG + AIP LT+E + + K+V K E+A+ ++R
Sbjct: 72 KTAIGDIEKAILKADLGLTPTSDGNMIRIAIPALTEERRKELVKVVKKYAEEAKVAVRNV 131
Query: 391 RQKAMDAIKKL--NSSLPKDDIK 453
R+ A D +KKL N + +D+++
Sbjct: 132 RRDANDDLKKLEKNGDITEDELR 154
[240][TOP]
>UniRef100_UPI000197C83E hypothetical protein PROVRETT_03931 n=1 Tax=Providencia rettgeri
DSM 1131 RepID=UPI000197C83E
Length = 185
Score = 104 bits (260), Expect = 3e-21
Identities = 57/155 (36%), Positives = 95/155 (61%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
I+ +A +ME ++ A +++SK+RTGRASP +LD I VE G PL ++A V+V D +T
Sbjct: 5 IQKDAQDRMEKSLEAFKSQISKVRTGRASPSLLDGITVEYYGSATPLRQLANVTVEDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L+++ +D +E AI++S LGLNP + G + +PPLT+E + + K+V E
Sbjct: 65 LAISVFDRSMSPAIEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRGDAEQG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R ++R R+ A D +K L + + +DD +R + +
Sbjct: 125 RIAVRNVRRDANDKVKALLKDKEISEDDERRSQDD 159
[241][TOP]
>UniRef100_UPI00016AD6AE ribosome recycling factor n=1 Tax=Burkholderia thailandensis MSMB43
RepID=UPI00016AD6AE
Length = 186
Score = 104 bits (260), Expect = 3e-21
Identities = 51/151 (33%), Positives = 93/151 (61%), Gaps = 2/151 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK +M+ +I A +L+K+RTGRA G+LDH+ V+ G +P+ ++A ++++D +T
Sbjct: 6 IKKGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDART 65
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+ V P++ + ++E AI + LGLNP G+ + +PPLT+E + + K+V E A
Sbjct: 66 IGVQPWEKNMVAKVEKAIREADLGLNPATSGDLIRVPMPPLTEERRRELTKVVKGEGETA 125
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKR 456
+ ++R R+ A + +KKL + + +DD +R
Sbjct: 126 KVAVRNLRRDANEQLKKLVKDKEISEDDERR 156
[242][TOP]
>UniRef100_Q1NCB3 Ribosome recycling factor n=1 Tax=Sphingomonas sp. SKA58
RepID=Q1NCB3_9SPHN
Length = 185
Score = 104 bits (260), Expect = 3e-21
Identities = 60/154 (38%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Frame = +1
Query: 13 KANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTL 192
KA+ +M A+ +L +L+ LRTGRA+ +LD + VE G +PL ++A VS +P+ L
Sbjct: 6 KADLERRMAGAVESLKGDLTGLRTGRANVQLLDPVTVEVYGAHMPLNQVATVSAPEPRML 65
Query: 193 SVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDAR 372
SV +D + + AI S+ LGLNP DG+ L IP LT+E + + KL +K E AR
Sbjct: 66 SVQVWDKSNVGPCDKAIRSAGLGLNPIVDGQTLRLPIPDLTEERRKELAKLASKYAEGAR 125
Query: 373 QSIRRARQKAMDAIK--KLNSSLPKDDIKRLEKE 468
++R R+ MD +K + + +D+ KRLE E
Sbjct: 126 VAVRNVRRDGMDNLKADEKKGEISEDERKRLETE 159
[243][TOP]
>UniRef100_D0FPV5 Ribosome recycling factor n=1 Tax=Erwinia pyrifoliae
RepID=D0FPV5_ERWPY
Length = 185
Score = 104 bits (260), Expect = 3e-21
Identities = 58/155 (37%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK +A ++ME + A +SK+RTGRASP +LD I+V+ G PL +A V+V D +T
Sbjct: 5 IKKDAETRMEKCVEAFKNHISKIRTGRASPSILDGIMVDYYGSATPLRLLASVTVEDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L +N +D +E AI++S LGLNP + G + +P LT+E + + K+V E
Sbjct: 65 LKINVFDRSIGAAVEKAIMTSDLGLNPSSAGSDIRVPLPALTEERRKDLIKVVRGEAEQG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R S+R R+ A D +K L + + +DD +R +++
Sbjct: 125 RVSVRNVRRDANDKLKALLKDKEISEDDDRRAQED 159
[244][TOP]
>UniRef100_C8NAT2 Ribosome recycling factor n=1 Tax=Cardiobacterium hominis ATCC
15826 RepID=C8NAT2_9GAMM
Length = 185
Score = 104 bits (260), Expect = 3e-21
Identities = 55/156 (35%), Positives = 97/156 (62%), Gaps = 2/156 (1%)
Frame = +1
Query: 7 TIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPK 186
+I+ +A ++ME ++ +L ELSK+RTGRA+ +LDH+ VE G +PL + A V+V D +
Sbjct: 4 SIQKDAAARMEKSVKSLEHELSKIRTGRANVSLLDHVQVEYYGSMVPLSQAANVTVTDYR 63
Query: 187 TLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCED 366
+L++ ++ + +E A+++S LGL P G+ + +PPLT+E + + K+V E
Sbjct: 64 SLTIQVWERNMVAVIEKALINSDLGLTPNTAGQNIHINLPPLTEERRKDLVKIVRNEGEQ 123
Query: 367 ARQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
A+ +IR R+ A ++K+L + +DD +R E E
Sbjct: 124 AKVAIRNVRRDANQSVKQLVTDKQASEDDERRAEAE 159
[245][TOP]
>UniRef100_C6MZU7 Ribosome recycling factor n=1 Tax=Legionella drancourtii LLAP12
RepID=C6MZU7_9GAMM
Length = 185
Score = 104 bits (260), Expect = 3e-21
Identities = 55/151 (36%), Positives = 93/151 (61%), Gaps = 2/151 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK ++ +M I +L ++SK+RTGRA+ G+LDH+ V+ G PL +IA ++ D +T
Sbjct: 5 IKQDSEKRMRKTIDSLHIDMSKIRTGRANVGLLDHVQVDYYGTLTPLNQIANITASDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
+SV P++ + +E AI++S LGLNP +G + +PPLT+E + + K+V E
Sbjct: 65 ISVTPWEKNMVAAVEKAILTSDLGLNPATNGNAIRVPMPPLTEERRKELIKVVRNEGEQG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKR 456
+ SIR R+ A + +K+L ++ +DD +R
Sbjct: 125 KVSIRNIRRDANNQLKELVKEKAISEDDERR 155
[246][TOP]
>UniRef100_C2WAV1 Ribosome-recycling factor n=1 Tax=Bacillus cereus Rock3-44
RepID=C2WAV1_BACCE
Length = 185
Score = 104 bits (260), Expect = 3e-21
Identities = 56/153 (36%), Positives = 92/153 (60%), Gaps = 2/153 (1%)
Frame = +1
Query: 1 GPTIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVID 180
G + +A +ME A++A S EL+ +R GRAS LD + V+ G P+V++A ++V +
Sbjct: 2 GQQVLKSANEKMEKAVAAYSRELASVRAGRASASALDKVQVDYYGAPTPVVQLANITVPE 61
Query: 181 PKTLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSC 360
+ L + PYD ++ +E AI+ + LGLNP DG + A P LT+E + + K V K
Sbjct: 62 ARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGSVIRIAFPALTEERRKDLVKTVKKYA 121
Query: 361 EDARQSIRRARQKAMDAIKKLN--SSLPKDDIK 453
E+A+ ++R R+ A D +KKL S + +DD++
Sbjct: 122 EEAKVAVRNVRRDANDDLKKLEKASEITEDDLR 154
[247][TOP]
>UniRef100_B6WW51 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC
29098 RepID=B6WW51_9DELT
Length = 186
Score = 104 bits (260), Expect = 3e-21
Identities = 57/156 (36%), Positives = 94/156 (60%), Gaps = 2/156 (1%)
Frame = +1
Query: 7 TIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPK 186
TI + +ME A++AL + KLRTGRA+ ++D I + G P+ ++A V+V D +
Sbjct: 5 TILLDTEDRMEKAMAALERDFQKLRTGRATTALVDGIKADYYGTPTPISQMASVAVPDSR 64
Query: 187 TLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCED 366
T+++ P+D + +E AI+ S LGL P DG + IPPLT+E + + K+ K ED
Sbjct: 65 TITIQPWDKGGISVVEKAILKSDLGLTPVNDGRIIRINIPPLTEERRKELVKVARKYTED 124
Query: 367 ARQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
A+ ++R R+ A D++KKL ++ +D+ K+ E E
Sbjct: 125 AKVAVRNVRRDANDSLKKLEKEKAITEDEQKKAEAE 160
[248][TOP]
>UniRef100_A3WAB8 Ribosome recycling factor n=1 Tax=Erythrobacter sp. NAP1
RepID=A3WAB8_9SPHN
Length = 185
Score = 104 bits (260), Expect = 3e-21
Identities = 55/154 (35%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Frame = +1
Query: 13 KANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTL 192
KA+ +M A+ +L +LS LRTGRA+ +LD ++VE G +PL +A V+ +P+ +
Sbjct: 6 KADTERRMNGAVESLKGDLSGLRTGRANTSLLDPVVVEVYGSMMPLASVATVNTPEPRMI 65
Query: 193 SVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDAR 372
SV +D + +E I + LGLNP DG+ + +P LT+E + + KL + E A+
Sbjct: 66 SVQVWDKSNVSAVEKGITKANLGLNPMTDGQTIRLPMPDLTEERRKELAKLAGQYAEKAK 125
Query: 373 QSIRRARQKAMDAIK--KLNSSLPKDDIKRLEKE 468
+IR R+ AM+++K + + +DD KR+E E
Sbjct: 126 IAIRNVRRDAMESLKTDEKKKEISEDDRKRMEDE 159
[249][TOP]
>UniRef100_Q9X5F0 Ribosome-recycling factor n=3 Tax=Zymomonas mobilis RepID=RRF_ZYMMO
Length = 185
Score = 104 bits (260), Expect = 3e-21
Identities = 58/154 (37%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Frame = +1
Query: 13 KANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTL 192
KA+ +M+ A+ +L ++ S LRTGRAS +LD + V+ G +PL ++A VSV +P+ +
Sbjct: 6 KADLERRMKGAVESLKSDFSGLRTGRASTSLLDPVTVDVYGANMPLNQVATVSVPEPRMI 65
Query: 193 SVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDAR 372
+V +D + ++ AI S+ LGLNP DG+ L IP LT+E + + KLV + E AR
Sbjct: 66 TVQVWDKSNVTPVDKAIRSAGLGLNPVVDGQMLRLPIPDLTEERRKELAKLVGQYSEKAR 125
Query: 373 QSIRRARQKAMDAIK--KLNSSLPKDDIKRLEKE 468
++R R+ D IK + + + +D+ KR E E
Sbjct: 126 IAVRNVRRDGNDQIKQDEKKNEISEDEKKRFENE 159
[250][TOP]
>UniRef100_A8FY39 Ribosome-recycling factor n=1 Tax=Shewanella sediminis HAW-EB3
RepID=RRF_SHESH
Length = 185
Score = 104 bits (260), Expect = 3e-21
Identities = 57/155 (36%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Frame = +1
Query: 10 IKANAVSQMEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKT 189
IK +A S+ME + + T+++K+RTGRA P +LD I V G PL ++ VS+ D +T
Sbjct: 5 IKNDAKSRMEKCVESTKTQMAKVRTGRAHPSLLDTIKVSYYGSMTPLKQVGNVSIEDSRT 64
Query: 190 LSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDA 369
L+VN +D ++ +E AI+SS LGLNP + G + +P LT+E + + K+V E+
Sbjct: 65 LAVNVFDSTMIQAVEKAIMSSDLGLNPMSAGATIRIPLPALTEERRKDLIKVVRAEAENG 124
Query: 370 RQSIRRARQKAMDAIKKL--NSSLPKDDIKRLEKE 468
R ++R R+ A +K L +DD++R E +
Sbjct: 125 RIAVRNVRRDANSDVKSLEKEKECTEDDVRRTEDD 159