AV780445 ( MPDL077a10_f )

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[1][TOP]
>UniRef100_Q2HVE2 RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold n=1
           Tax=Medicago truncatula RepID=Q2HVE2_MEDTR
          Length = 729

 Score = 48.9 bits (115), Expect(2) = 9e-10
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
 Frame = +3

Query: 252 W*VWKWRNNMVFE------DSPWSVDEAWRKLGHEHDEFITFSDGDAGDPGSWLSSRWQP 413
           W +W WRN  +FE       +P  V + + +   ++ + +  S          +   W  
Sbjct: 575 WYLWNWRNKSIFEIGFQRPSNPTLVIQKFTREIEDNTKLVHKSSHQK----ETIYIGWMR 630

Query: 414 PRQGTVKLNVDGSGREQDRCMGAGGLIRDDQGKWL 518
           P  G VKLN DG+ +      G GGL+RD  G+W+
Sbjct: 631 PPFGWVKLNCDGAWKGSGTLAGCGGLLRDSDGRWI 665

 Score = 37.7 bits (86), Expect(2) = 9e-10
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +1

Query: 82  CPAPEEDI*HCLRDCPHSQEIWLRLGAWAW-TNLGVGDHRSWI 207
           C   +E + H LRDC HS ++WLRL    + TN    D R W+
Sbjct: 508 CAREDETVIHVLRDCVHSTQVWLRLIPHNYITNFFSFDCREWV 550

[2][TOP]
>UniRef100_O82276 Putative non-LTR retroelement reverse transcriptase n=1
            Tax=Arabidopsis thaliana RepID=O82276_ARATH
          Length = 1231

 Score = 48.9 bits (115), Expect(2) = 3e-08
 Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
 Frame = +3

Query: 246  GVW*VWKWRNNMVFEDSPWSVDEAWRKLGHEHDEFITFSDGDAGDPGSWLSS----RWQP 413
            G+W  WKWR   VF +     D   + +    +E      G  G+  + +      RWQ 
Sbjct: 1007 GIWWAWKWRCCDVFGERKICRDRL-KFIKDMAEEVRRVHVGAVGNRPNGVRVERMIRWQV 1065

Query: 414  PRQGTVKLNVDGSGREQDRCMGAGGLIRDDQGKWL 518
            P  G VK+  DG+ R       AGG IR+ QG+WL
Sbjct: 1066 PSDGWVKITTDGASRGNHGLAAAGGAIRNGQGEWL 1100

 Score = 32.7 bits (73), Expect(2) = 3e-08
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = +1

Query: 82   CPAPEEDI*HCLRDCPHSQEIWLRL 156
            C   EE I H LRDCP  + IW RL
Sbjct: 947  CNGAEETILHVLRDCPAMEPIWRRL 971

[3][TOP]
>UniRef100_Q9FG26 Non-LTR retroelement reverse transcriptase-like n=1 Tax=Arabidopsis
           thaliana RepID=Q9FG26_ARATH
          Length = 676

 Score = 45.4 bits (106), Expect(2) = 2e-06
 Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
 Frame = +3

Query: 249 VW*VWKWRNNMVFEDSPWSVDEA--WRKLGHEHDEFITFSDGDAGDPGSWLSSR---WQP 413
           VW  WKWR   VF +     D     +    E +     ++GDA +    L  R   W+ 
Sbjct: 453 VWWGWKWRCGYVFGEDSRCRDRVKFLKSAVAEVEAAHLAANGDARE--DVLVERMIAWRK 510

Query: 414 PRQGTVKLNVDGSGREQDRCMGAGGLIRDDQGKWL 518
           P +G V +N DG+         AGG+IRD+ G WL
Sbjct: 511 PAEGWVTMNTDGASHGNPGQATAGGVIRDEHGSWL 545

 Score = 30.0 bits (66), Expect(2) = 2e-06
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 82  CPAPEEDI*HCLRDCPHSQEIWLRL 156
           C    E + H LRDCP    IW+R+
Sbjct: 388 CKGASESLIHVLRDCPAMMGIWMRV 412