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[1][TOP]
>UniRef100_A5AH66 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5AH66_VITVI
Length = 666
Score = 236 bits (603), Expect = 7e-61
Identities = 122/155 (78%), Positives = 135/155 (87%), Gaps = 2/155 (1%)
Frame = +3
Query: 123 RARHFHSNPVPLQFRASLPSLAEFAVADFPYEEGSKN--DEGLEIKKLGISEEIVSALAK 296
R R+F S PL FRAS+ S AE+AVADF EE S DEGLEI KLGI++EIVSALA
Sbjct: 73 RVRNFRSQSGPLDFRASVVSRAEYAVADFSDEEKSSKGGDEGLEISKLGIAQEIVSALAN 132
Query: 297 KGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLA 476
KGI+KLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDK+I++NAKHGRGR+PLA
Sbjct: 133 KGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKVIQYNAKHGRGRNPLA 192
Query: 477 LALAPTRELAKQVEKEFYDSAPNLDTICVNGGTPI 581
L LAPTRELA+QVEKEF +SAPNLDT+CV GGTPI
Sbjct: 193 LVLAPTRELARQVEKEFXESAPNLDTLCVYGGTPI 227
[2][TOP]
>UniRef100_UPI00019844A0 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI00019844A0
Length = 666
Score = 236 bits (602), Expect = 1e-60
Identities = 122/155 (78%), Positives = 135/155 (87%), Gaps = 2/155 (1%)
Frame = +3
Query: 123 RARHFHSNPVPLQFRASLPSLAEFAVADFPYEEGSKN--DEGLEIKKLGISEEIVSALAK 296
R R+F S PL FRAS+ S AE+AVADF EE S DEGLEI KLGI++EIVSALA
Sbjct: 73 RVRNFRSQSGPLDFRASVVSRAEYAVADFSDEEKSSKGGDEGLEISKLGIAQEIVSALAN 132
Query: 297 KGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLA 476
KGI+KLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDK+I++NAKHGRGR+PLA
Sbjct: 133 KGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKVIQYNAKHGRGRNPLA 192
Query: 477 LALAPTRELAKQVEKEFYDSAPNLDTICVNGGTPI 581
L LAPTRELA+QVEKEF +SAPNLDT+CV GGTPI
Sbjct: 193 LVLAPTRELARQVEKEFCESAPNLDTLCVYGGTPI 227
[3][TOP]
>UniRef100_B9S3L6 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus
communis RepID=B9S3L6_RICCO
Length = 323
Score = 216 bits (550), Expect = 1e-54
Identities = 113/163 (69%), Positives = 134/163 (82%), Gaps = 12/163 (7%)
Frame = +3
Query: 129 RHFHSNPVPLQFRASLPSLAEFA-VADFPYEEG-----------SKNDEGLEIKKLGISE 272
R H PL F+ASL S AEFA V D+ YEE + ++EGLEI KLGI++
Sbjct: 47 RGIHVKSGPLDFKASLMSQAEFAAVDDYGYEEEKGGFGKGNNDINSDEEGLEIGKLGIAQ 106
Query: 273 EIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKH 452
EIVSALA++GI+KLFPIQ+AVLEPAMQGRD+ GRARTGTGKTLAFGIPI+DKII+FNAKH
Sbjct: 107 EIVSALARRGITKLFPIQKAVLEPAMQGRDLFGRARTGTGKTLAFGIPILDKIIQFNAKH 166
Query: 453 GRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTPI 581
GRGR+PLAL +APTRELA+QVEKEF++SAP+LDTIC+ GGTPI
Sbjct: 167 GRGRNPLALVMAPTRELARQVEKEFHESAPSLDTICLYGGTPI 209
[4][TOP]
>UniRef100_B9IHF6 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9IHF6_POPTR
Length = 551
Score = 215 bits (547), Expect = 2e-54
Identities = 106/153 (69%), Positives = 127/153 (83%)
Frame = +3
Query: 123 RARHFHSNPVPLQFRASLPSLAEFAVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKG 302
+AR FH PL F+AS + AV D+ Y+EG N+EGLEI +LGIS+EIV ALAKKG
Sbjct: 2 KARDFHVKSGPLDFKASSVTETFNAVPDYGYDEGKGNEEGLEISRLGISQEIVGALAKKG 61
Query: 303 ISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALA 482
I+KLFPIQRAVLEPAMQG+DM GRARTGTGKTLAFGIPI+DKI++FNA+HGRGR PL +
Sbjct: 62 ITKLFPIQRAVLEPAMQGKDMFGRARTGTGKTLAFGIPILDKILQFNAQHGRGRYPLGIV 121
Query: 483 LAPTRELAKQVEKEFYDSAPNLDTICVNGGTPI 581
+APTRELA+QVEKEF ++AP+LD C+ GGTPI
Sbjct: 122 MAPTRELARQVEKEFREAAPSLDITCLYGGTPI 154
[5][TOP]
>UniRef100_B9HDF9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HDF9_POPTR
Length = 556
Score = 214 bits (546), Expect = 3e-54
Identities = 113/193 (58%), Positives = 148/193 (76%), Gaps = 2/193 (1%)
Frame = +3
Query: 9 MITAILRRACSALSRRGAATFIAASTVTGELRQLPVVARARHFHSNPVPLQFRASLPSLA 188
M++ ILRR+ S+ + ++F+ + T++ R FH PL F+AS + A
Sbjct: 1 MLSTILRRSSSSYAP--FSSFLTSPTIS------------RDFHVKSGPLDFKASSVTQA 46
Query: 189 EFAVADFPYEE--GSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRD 362
AVAD+ +E G ++EGLEI LGIS+EIV++LAKKGI+KLFPIQ+AVLEPAMQG+D
Sbjct: 47 GIAVADYGSDEEKGKGSEEGLEISNLGISKEIVNSLAKKGITKLFPIQKAVLEPAMQGKD 106
Query: 363 MIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAP 542
M GRARTGTGKTLAFGIPI+DKII+FN +HG+GR+PLA+ +APTRELA+QV+KEF+DSAP
Sbjct: 107 MFGRARTGTGKTLAFGIPILDKIIEFNKQHGKGRNPLAMVMAPTRELARQVQKEFHDSAP 166
Query: 543 NLDTICVNGGTPI 581
+LDTIC+ GG PI
Sbjct: 167 SLDTICLYGGVPI 179
[6][TOP]
>UniRef100_Q9LUW5 DEAD-box ATP-dependent RNA helicase 53 n=1 Tax=Arabidopsis thaliana
RepID=RH53_ARATH
Length = 616
Score = 207 bits (527), Expect = 5e-52
Identities = 118/216 (54%), Positives = 144/216 (66%), Gaps = 25/216 (11%)
Frame = +3
Query: 9 MITAILRRACSALSRRGAATFIA------------ASTVTGELRQL---------PVVAR 125
MIT +LRR+ S+R + + A+T +L + P
Sbjct: 1 MITTVLRRSLLDASKRNLSASLTSINTVLFHNLAPAATRVSDLALIGSSDVKAGFPFGVE 60
Query: 126 ARHFHSNPVPLQFRASLPSLAEFAVADFPY----EEGSKNDEGLEIKKLGISEEIVSALA 293
A+ H PL FRAS+ S A FA+++ + S +GL I +LGIS EIV AL+
Sbjct: 61 AKGIHFQSGPLDFRASMVSQAGFAISESSERRVGDSESVGGDGLAISELGISPEIVKALS 120
Query: 294 KKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPL 473
KGI KLFPIQ+AVLEPAM+GRDMIGRARTGTGKTLAFGIPI+DKIIK+NAKHGRGR+PL
Sbjct: 121 SKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKHGRGRNPL 180
Query: 474 ALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTPI 581
L LAPTRELA+QVEKEF +SAP+LDTIC+ GGTPI
Sbjct: 181 CLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPI 216
[7][TOP]
>UniRef100_Q9LUW6 DEAD-box ATP-dependent RNA helicase 9 n=1 Tax=Arabidopsis thaliana
RepID=RH9_ARATH
Length = 610
Score = 202 bits (515), Expect = 1e-50
Identities = 121/228 (53%), Positives = 147/228 (64%), Gaps = 37/228 (16%)
Frame = +3
Query: 9 MITAILRRACSALSRRGAATFI-------------AASTVTG------ELRQLPVVA--- 122
MI+ +LRR+ SRR A + AA+TV+ ++ LP +
Sbjct: 1 MISTVLRRSILGTSRRTLAASVTSINAALFHNLAPAAATVSDLANGATNVKSLPSNSSPF 60
Query: 123 --RARHFHSNPVPLQFRASLPSLAEFAVADFP--YEE-----------GSKNDEGLEIKK 257
+ R FH VP +FR+S+ S A FA ++ YE S +GL I
Sbjct: 61 GVKVRDFHVKSVPSEFRSSIVSSAGFAAQEYAPSYENDGGIGDSESVGSSGGGDGLAIAD 120
Query: 258 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIK 437
LGIS EIV AL +GI KLFPIQ+AVLEPAM+GRDMIGRARTGTGKTLAFGIPI+DKIIK
Sbjct: 121 LGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIK 180
Query: 438 FNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTPI 581
FNAKHGRG++P L LAPTRELA+QVEKEF +SAP+LDTIC+ GGTPI
Sbjct: 181 FNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPI 228
[8][TOP]
>UniRef100_C5YRW1 Putative uncharacterized protein Sb08g021180 n=1 Tax=Sorghum
bicolor RepID=C5YRW1_SORBI
Length = 618
Score = 187 bits (476), Expect = 4e-46
Identities = 112/198 (56%), Positives = 134/198 (67%), Gaps = 13/198 (6%)
Frame = +3
Query: 27 RRACSALSRRGAATFIAASTVTGELRQLPVVARARHFHSNPVPLQFR----ASLPSLAEF 194
RRA SAL+ AA R ++ A FHS+P L FR A + AEF
Sbjct: 13 RRAVSALAAALLQHQPAALGAAVAPRAPTLLPAAAWFHSSPAWLGFRETGAAGAAARAEF 72
Query: 195 AVADFPYEE---------GSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPA 347
A + + E G+ +EGLEI KLGIS +IV LAKKGI+KLFPIQRAVLEPA
Sbjct: 73 AAEEGSFYEEDKRAPATGGAAAEEGLEIAKLGISNKIVERLAKKGITKLFPIQRAVLEPA 132
Query: 348 MQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEF 527
MQGRDM+GRA+TGTGKTLAFGIPI+D II+ N K+ G+ PLA+ LAPTRELAKQVE+EF
Sbjct: 133 MQGRDMVGRAKTGTGKTLAFGIPILDAIIRHNEKYKPGKFPLAIVLAPTRELAKQVEREF 192
Query: 528 YDSAPNLDTICVNGGTPI 581
DS+P L+T+CV GGTPI
Sbjct: 193 LDSSP-LETLCVYGGTPI 209
[9][TOP]
>UniRef100_C5X9H0 Putative uncharacterized protein Sb02g002790 n=1 Tax=Sorghum
bicolor RepID=C5X9H0_SORBI
Length = 602
Score = 177 bits (449), Expect(2) = 2e-44
Identities = 97/152 (63%), Positives = 115/152 (75%), Gaps = 1/152 (0%)
Frame = +3
Query: 129 RHFHSNPVPLQFRASLPSLAEFAVAD-FPYEEGSKNDEGLEIKKLGISEEIVSALAKKGI 305
R H +P PL FR++ S + + G+ +EGLEI +L IS IV LA +GI
Sbjct: 49 RALHGSPNPLGFRSTPASWTRPGPGEGVGVDTGA--EEGLEIARLWISPRIVEKLAARGI 106
Query: 306 SKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALAL 485
+KLFPIQRAVLEPAMQG+DMIGRARTGTGKTLAFGIPIMDKI+ N K+G GR+PLA+ L
Sbjct: 107 TKLFPIQRAVLEPAMQGKDMIGRARTGTGKTLAFGIPIMDKILSHNEKNGNGRNPLAIVL 166
Query: 486 APTRELAKQVEKEFYDSAPNLDTICVNGGTPI 581
APTRELA+QVEKEF +SAP LDT+CV GG PI
Sbjct: 167 APTRELARQVEKEFRESAP-LDTLCVYGGVPI 197
Score = 26.2 bits (56), Expect(2) = 2e-44
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 64 PPSSPPQPSPASSVSSPSSP 123
PPS+PP P A + SP+ P
Sbjct: 28 PPSAPPGPCQAPTPGSPAPP 47
[10][TOP]
>UniRef100_A2ZMM6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2ZMM6_ORYSI
Length = 630
Score = 181 bits (458), Expect = 5e-44
Identities = 111/210 (52%), Positives = 139/210 (66%), Gaps = 22/210 (10%)
Frame = +3
Query: 18 AILRRACSALSRRGAATFIAASTVTGELRQLPVVARARH------FHSNPVPLQFR---- 167
+ILRRA A RR A + +AA+ + E VV R FHS+P L FR
Sbjct: 3 SILRRA--APLRRRAVSALAAAVLRREEAAAEVVVSRRATIPAAWFHSSPAWLGFRETGA 60
Query: 168 ASLPSLAEFAVADFPYEEGSKN------------DEGLEIKKLGISEEIVSALAKKGISK 311
A + ++A + + E K +EGLE+ KLGIS +IVS LA +GI+K
Sbjct: 61 AGAAARPQYAADEGLFYEEDKRGAKAGGVAAGGAEEGLEVAKLGISPKIVSQLASRGITK 120
Query: 312 LFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAP 491
LFPIQRAVLEPAMQG+DM+GRA+TGTGKTLAFGIPI+D II+ N K+ G+ PLA+ LAP
Sbjct: 121 LFPIQRAVLEPAMQGKDMVGRAKTGTGKTLAFGIPILDAIIRHNEKNSPGKFPLAIVLAP 180
Query: 492 TRELAKQVEKEFYDSAPNLDTICVNGGTPI 581
TRELAKQVE+EF DS+ N++TICV GGTPI
Sbjct: 181 TRELAKQVEREFSDSS-NVETICVYGGTPI 209
[11][TOP]
>UniRef100_Q0ILZ4 DEAD-box ATP-dependent RNA helicase 9 n=1 Tax=Oryza sativa Japonica
Group RepID=RH9_ORYSJ
Length = 628
Score = 181 bits (458), Expect = 5e-44
Identities = 111/210 (52%), Positives = 139/210 (66%), Gaps = 22/210 (10%)
Frame = +3
Query: 18 AILRRACSALSRRGAATFIAASTVTGELRQLPVVARARH------FHSNPVPLQFR---- 167
+ILRRA A RR A + +AA+ + E VV R FHS+P L FR
Sbjct: 3 SILRRA--APLRRRAVSALAAAVLRREEAAAEVVVSRRATIPAAWFHSSPAWLGFRETGA 60
Query: 168 ASLPSLAEFAVADFPYEEGSKN------------DEGLEIKKLGISEEIVSALAKKGISK 311
A + ++A + + E K +EGLE+ KLGIS +IVS LA +GI+K
Sbjct: 61 AGAAARPQYAADEGLFYEEDKRGAKAGGVAAGGAEEGLEVAKLGISPKIVSQLASRGITK 120
Query: 312 LFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAP 491
LFPIQRAVLEPAMQG+DM+GRA+TGTGKTLAFGIPI+D II+ N K+ G+ PLA+ LAP
Sbjct: 121 LFPIQRAVLEPAMQGKDMVGRAKTGTGKTLAFGIPILDAIIRHNEKNSPGKFPLAIVLAP 180
Query: 492 TRELAKQVEKEFYDSAPNLDTICVNGGTPI 581
TRELAKQVE+EF DS+ N++TICV GGTPI
Sbjct: 181 TRELAKQVEREFSDSS-NVETICVYGGTPI 209
[12][TOP]
>UniRef100_Q0D8N0-2 Isoform 2 of DEAD-box ATP-dependent RNA helicase 53 n=1 Tax=Oryza
sativa Japonica Group RepID=Q0D8N0-2
Length = 585
Score = 180 bits (456), Expect = 8e-44
Identities = 97/159 (61%), Positives = 120/159 (75%), Gaps = 2/159 (1%)
Frame = +3
Query: 111 PVVARARHFHSNPVPLQFRASLPSLAEFAVADFPYEEGSK--NDEGLEIKKLGISEEIVS 284
P R R FH +P PL FR++ S + E G+ D+GLE+ +LGIS IV
Sbjct: 45 PEPPRRRAFHGSPSPLGFRSTPASWSS-------PEAGAAVGGDDGLEVARLGISPWIVE 97
Query: 285 ALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGR 464
LA +GI++LFPIQRAVL+PAMQG+DMIGRARTGTGKTLAFGIPIMD+I++ N K+G GR
Sbjct: 98 RLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGR 157
Query: 465 DPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTPI 581
+PLA+ LAPTRELA+QVEKEF +SAP LD++CV GG PI
Sbjct: 158 NPLAIILAPTRELARQVEKEFKESAP-LDSLCVYGGVPI 195
[13][TOP]
>UniRef100_Q0D8N0-3 Isoform 3 of DEAD-box ATP-dependent RNA helicase 53 n=1 Tax=Oryza
sativa Japonica Group RepID=Q0D8N0-3
Length = 330
Score = 180 bits (456), Expect = 8e-44
Identities = 97/159 (61%), Positives = 120/159 (75%), Gaps = 2/159 (1%)
Frame = +3
Query: 111 PVVARARHFHSNPVPLQFRASLPSLAEFAVADFPYEEGSK--NDEGLEIKKLGISEEIVS 284
P R R FH +P PL FR++ S + E G+ D+GLE+ +LGIS IV
Sbjct: 45 PEPPRRRAFHGSPSPLGFRSTPASWSS-------PEAGAAVGGDDGLEVARLGISPWIVE 97
Query: 285 ALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGR 464
LA +GI++LFPIQRAVL+PAMQG+DMIGRARTGTGKTLAFGIPIMD+I++ N K+G GR
Sbjct: 98 RLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGR 157
Query: 465 DPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTPI 581
+PLA+ LAPTRELA+QVEKEF +SAP LD++CV GG PI
Sbjct: 158 NPLAIILAPTRELARQVEKEFKESAP-LDSLCVYGGVPI 195
[14][TOP]
>UniRef100_Q0D8N0 DEAD-box ATP-dependent RNA helicase 53 n=3 Tax=Oryza sativa
RepID=RH53_ORYSJ
Length = 602
Score = 180 bits (456), Expect = 8e-44
Identities = 97/159 (61%), Positives = 120/159 (75%), Gaps = 2/159 (1%)
Frame = +3
Query: 111 PVVARARHFHSNPVPLQFRASLPSLAEFAVADFPYEEGSK--NDEGLEIKKLGISEEIVS 284
P R R FH +P PL FR++ S + E G+ D+GLE+ +LGIS IV
Sbjct: 45 PEPPRRRAFHGSPSPLGFRSTPASWSS-------PEAGAAVGGDDGLEVARLGISPWIVE 97
Query: 285 ALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGR 464
LA +GI++LFPIQRAVL+PAMQG+DMIGRARTGTGKTLAFGIPIMD+I++ N K+G GR
Sbjct: 98 RLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGR 157
Query: 465 DPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTPI 581
+PLA+ LAPTRELA+QVEKEF +SAP LD++CV GG PI
Sbjct: 158 NPLAIILAPTRELARQVEKEFKESAP-LDSLCVYGGVPI 195
[15][TOP]
>UniRef100_B6SV06 Nucleolar RNA helicase 2 n=1 Tax=Zea mays RepID=B6SV06_MAIZE
Length = 613
Score = 176 bits (445), Expect = 2e-42
Identities = 110/205 (53%), Positives = 134/205 (65%), Gaps = 17/205 (8%)
Frame = +3
Query: 18 AILRRACSALSRRGAATF----IAASTVTGELRQLPVVARA--------RHFHSNPVPLQ 161
++LRRA +A + AAT+ + A P A A R FH + L
Sbjct: 3 SLLRRAIAASASSPAATYRRLLVVAPLSPPAAPPGPCQAPAAGSPEPPRRAFHCSTPTLG 62
Query: 162 FRASLPSLAEFAVADFPYE-EGSKND----EGLEIKKLGISEEIVSALAKKGISKLFPIQ 326
FR++ S A + E EG D +GLEI +LG S IV LA +GI++LFPIQ
Sbjct: 63 FRSTPASWAGPCPGEGEGEGEGEGVDTGAEKGLEIARLGTSPRIVEKLAARGITRLFPIQ 122
Query: 327 RAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELA 506
RAVLEPAMQG+DMIGRARTGTGKTLAFGIPIMDKI+ +N K+G GR+PLA+ LAPTRELA
Sbjct: 123 RAVLEPAMQGKDMIGRARTGTGKTLAFGIPIMDKILSYNEKNGNGRNPLAIILAPTRELA 182
Query: 507 KQVEKEFYDSAPNLDTICVNGGTPI 581
+QVEKEF +SAP LDT+CV GG PI
Sbjct: 183 RQVEKEFRESAP-LDTLCVYGGVPI 206
[16][TOP]
>UniRef100_B9GE86 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9GE86_ORYSJ
Length = 676
Score = 174 bits (440), Expect = 6e-42
Identities = 97/168 (57%), Positives = 120/168 (71%), Gaps = 16/168 (9%)
Frame = +3
Query: 126 ARHFHSNPVPLQFR----ASLPSLAEFAVADFPYEEGSKN------------DEGLEIKK 257
A FHS+P L FR A + ++A + + E K +EGLE+ K
Sbjct: 91 AAWFHSSPAWLGFRETGAAGAAARPQYAADEGLFYEEDKRGAKAGGVAAGGAEEGLEVAK 150
Query: 258 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIK 437
LGIS +IVS LA +GI+KLFPIQRAVLEPAMQG+DM+GRA+TGTGKTLAFGIPI+D II+
Sbjct: 151 LGISPKIVSQLASRGITKLFPIQRAVLEPAMQGKDMVGRAKTGTGKTLAFGIPILDAIIR 210
Query: 438 FNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTPI 581
N K+ G+ PLA+ LAPTRELAKQVE+EF DS+ N++TICV GGTPI
Sbjct: 211 HNEKNSPGKFPLAIVLAPTRELAKQVEREFSDSS-NVETICVYGGTPI 257
[17][TOP]
>UniRef100_A9T4H8 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9T4H8_PHYPA
Length = 619
Score = 152 bits (385), Expect = 1e-35
Identities = 78/115 (67%), Positives = 94/115 (81%), Gaps = 2/115 (1%)
Frame = +3
Query: 243 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 422
L I LG+SE+IV ALAK+GI+ LFPIQRAVLEPAM+G+D+I RA+TGTGKTLAFGIPI+
Sbjct: 4 LAINSLGVSEDIVEALAKRGITHLFPIQRAVLEPAMKGQDLIARAKTGTGKTLAFGIPII 63
Query: 423 DKIIKFNAKHG--RGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTPI 581
I+ NA++ +GR P AL LAPTRELAKQVE+EF +SAP L T+CV GG PI
Sbjct: 64 RHIVDGNAENAPRQGRSPRALVLAPTRELAKQVEREFMESAPMLSTVCVYGGVPI 118
[18][TOP]
>UniRef100_A9RFR6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RFR6_PHYPA
Length = 793
Score = 150 bits (379), Expect = 7e-35
Identities = 79/125 (63%), Positives = 96/125 (76%), Gaps = 4/125 (3%)
Frame = +3
Query: 219 EGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKT 398
E + + L I +LGI + + ALAK+GI++LFPIQRAVLEPAMQGRD+IGRA+TGTGKT
Sbjct: 129 ESMDDGDELAISRLGIPDAVADALAKRGITQLFPIQRAVLEPAMQGRDLIGRAKTGTGKT 188
Query: 399 LAFGIPIMDKIIKFNAKH----GRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVN 566
LAFGIPI++ II+ N ++ GR P AL LAPTRELAKQVE+EF +SAP L TICV
Sbjct: 189 LAFGIPIINNIIRENEENRVARRSGRAPRALVLAPTRELAKQVEREFMESAPMLSTICVY 248
Query: 567 GGTPI 581
GG I
Sbjct: 249 GGVAI 253
[19][TOP]
>UniRef100_A9S7H7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9S7H7_PHYPA
Length = 689
Score = 148 bits (374), Expect = 3e-34
Identities = 77/125 (61%), Positives = 93/125 (74%), Gaps = 4/125 (3%)
Frame = +3
Query: 219 EGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKT 398
E +++ L + LGI + +V ALAK+GI KLFPIQRAVL+PAMQGRD+IGRA+TGTGKT
Sbjct: 39 ESVDDEDELAVANLGIPQAVVDALAKRGIEKLFPIQRAVLDPAMQGRDLIGRAKTGTGKT 98
Query: 399 LAFGIPIMDKIIKFN----AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVN 566
LAFGIPI+ I+K + GR P AL LAPTRELAKQVE+EF +SAP L T+CV
Sbjct: 99 LAFGIPIIHNILKAHEADRTSRRSGRAPRALVLAPTRELAKQVEREFMESAPMLSTVCVY 158
Query: 567 GGTPI 581
GG I
Sbjct: 159 GGVSI 163
[20][TOP]
>UniRef100_A9RFT8 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9RFT8_PHYPA
Length = 638
Score = 147 bits (372), Expect = 4e-34
Identities = 79/122 (64%), Positives = 95/122 (77%), Gaps = 2/122 (1%)
Frame = +3
Query: 222 GSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTL 401
G+ DE L I LG+SE+IV+ALAK+GI+ LFPIQRAVLEPAM+G+D+I RA+TGTGKTL
Sbjct: 20 GAGKDE-LAIDSLGVSEDIVNALAKRGITHLFPIQRAVLEPAMKGQDLIARAKTGTGKTL 78
Query: 402 AFGIPIMDKIIKFNAKHG--RGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
AFGIPI+ II + + GR P AL LAPTRELAKQVE+EF +SAP L T+CV GG
Sbjct: 79 AFGIPIIQHIIDAHKESAPRHGRSPRALVLAPTRELAKQVEREFMESAPMLSTVCVYGGV 138
Query: 576 PI 581
I
Sbjct: 139 SI 140
[21][TOP]
>UniRef100_A7PJZ6 Chromosome chr12 scaffold_18, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PJZ6_VITVI
Length = 341
Score = 144 bits (362), Expect = 6e-33
Identities = 68/78 (87%), Positives = 75/78 (96%)
Frame = +3
Query: 348 MQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEF 527
MQGRDMIGRARTGTGKTLAFGIPIMDK+I++NAKHGRGR+PLAL LAPTRELA+QVEKEF
Sbjct: 1 MQGRDMIGRARTGTGKTLAFGIPIMDKVIQYNAKHGRGRNPLALVLAPTRELARQVEKEF 60
Query: 528 YDSAPNLDTICVNGGTPI 581
+SAPNLDT+CV GGTPI
Sbjct: 61 CESAPNLDTLCVYGGTPI 78
[22][TOP]
>UniRef100_B6SSK6 Nucleolar RNA helicase 2 n=1 Tax=Zea mays RepID=B6SSK6_MAIZE
Length = 744
Score = 140 bits (354), Expect = 5e-32
Identities = 73/126 (57%), Positives = 95/126 (75%), Gaps = 2/126 (1%)
Frame = +3
Query: 201 ADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRAR 380
AD +E G ++E L I +LG+ +E+V+ L K+GI+ LFPIQRAVL PA++GRD+I RA+
Sbjct: 74 ADEGFEAGEGDNEELAIARLGLPDELVATLEKRGITHLFPIQRAVLIPALEGRDLIARAK 133
Query: 381 TGTGKTLAFGIPIMDKIIKFNAKH--GRGRDPLALALAPTRELAKQVEKEFYDSAPNLDT 554
TGTGKTLAFGIP++ ++I+ + RGR P L LAPTRELAKQVEKE +SAP L T
Sbjct: 134 TGTGKTLAFGIPMIKQLIEQDDGRITRRGRTPRVLVLAPTRELAKQVEKEIKESAPKLGT 193
Query: 555 ICVNGG 572
+CV GG
Sbjct: 194 VCVYGG 199
[23][TOP]
>UniRef100_Q6L724 ATP-dependent RNA helicase n=1 Tax=Hordeum vulgare
RepID=Q6L724_HORVU
Length = 764
Score = 139 bits (349), Expect = 2e-31
Identities = 73/120 (60%), Positives = 93/120 (77%), Gaps = 2/120 (1%)
Frame = +3
Query: 219 EGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKT 398
EG K++ L I +LG+ ++V+ L K+GI+ LFPIQRAVL PA++GRD+I RA+TGTGKT
Sbjct: 85 EGDKDE--LAISRLGLPAQLVATLEKRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKT 142
Query: 399 LAFGIPIMDKIIKFNAKH--GRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGG 572
LAFGIP++ +II+ + GRGR P AL LAPTRELAKQVEKE +SAP L T+CV GG
Sbjct: 143 LAFGIPMIKQIIEQDEGRTPGRGRIPRALVLAPTRELAKQVEKEIMESAPKLSTVCVYGG 202
[24][TOP]
>UniRef100_B8LKW8 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LKW8_PICSI
Length = 802
Score = 139 bits (349), Expect = 2e-31
Identities = 74/134 (55%), Positives = 95/134 (70%), Gaps = 11/134 (8%)
Frame = +3
Query: 204 DFPYEEG-------SKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRD 362
D+ YE+ ND L++ L +S+E+V ALA +GI+ LFPIQRAVL PA++GRD
Sbjct: 124 DYDYEDEIGNDVVVDNNDGNLDLSGLNLSQELVEALANRGITHLFPIQRAVLVPALEGRD 183
Query: 363 MIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRD----PLALALAPTRELAKQVEKEFY 530
+IGRA+TGTGKTLAFGIPI++++ K N ++ R P L LAPTRELAKQVEKEF
Sbjct: 184 LIGRAKTGTGKTLAFGIPIIERLTKDNKENKLLRQSRRLPRVLVLAPTRELAKQVEKEFK 243
Query: 531 DSAPNLDTICVNGG 572
+SAP L T C+ GG
Sbjct: 244 ESAPFLSTACIYGG 257
[25][TOP]
>UniRef100_Q0DM51-3 Isoform 3 of DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Oryza
sativa Japonica Group RepID=Q0DM51-3
Length = 757
Score = 135 bits (339), Expect = 3e-30
Identities = 69/119 (57%), Positives = 90/119 (75%), Gaps = 2/119 (1%)
Frame = +3
Query: 222 GSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTL 401
G +++ L I +LG+ E++VS L K+GI+ LFPIQRAVL PA+ GRD+I RA+TGTGKTL
Sbjct: 97 GEGDEDELAIARLGLPEQLVSTLEKRGITHLFPIQRAVLIPALDGRDLIARAKTGTGKTL 156
Query: 402 AFGIPIMDKIIKFNAKHG--RGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGG 572
AFGIP++ ++++ + RGR P L LAPTRELAKQVEKE +SAP L T+CV GG
Sbjct: 157 AFGIPMIKQLMEEDDGRSVRRGRIPRVLVLAPTRELAKQVEKEIKESAPKLSTVCVYGG 215
[26][TOP]
>UniRef100_Q0DM51 DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Oryza sativa Japonica
Group RepID=RH3_ORYSJ
Length = 758
Score = 135 bits (339), Expect = 3e-30
Identities = 69/119 (57%), Positives = 90/119 (75%), Gaps = 2/119 (1%)
Frame = +3
Query: 222 GSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTL 401
G +++ L I +LG+ E++VS L K+GI+ LFPIQRAVL PA+ GRD+I RA+TGTGKTL
Sbjct: 97 GEGDEDELAIARLGLPEQLVSTLEKRGITHLFPIQRAVLIPALDGRDLIARAKTGTGKTL 156
Query: 402 AFGIPIMDKIIKFNAKHG--RGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGG 572
AFGIP++ ++++ + RGR P L LAPTRELAKQVEKE +SAP L T+CV GG
Sbjct: 157 AFGIPMIKQLMEEDDGRSVRRGRIPRVLVLAPTRELAKQVEKEIKESAPKLSTVCVYGG 215
[27][TOP]
>UniRef100_B9RFT3 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus
communis RepID=B9RFT3_RICCO
Length = 772
Score = 134 bits (336), Expect = 7e-30
Identities = 71/120 (59%), Positives = 88/120 (73%), Gaps = 2/120 (1%)
Frame = +3
Query: 219 EGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKT 398
E +D+ L I KLG+ + +V +L K+GI+ LFPIQRAVL PA++GRD+I RA+TGTGKT
Sbjct: 112 ESLPDDDELAISKLGLPQRLVESLEKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKT 171
Query: 399 LAFGIPIMDKIIKFNAKHGR--GRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGG 572
LAFGIPI+ I + + R GR P L LAPTRELAKQVEKE +SAP L T+CV GG
Sbjct: 172 LAFGIPIIKCITEDDKSSQRRTGRLPRVLVLAPTRELAKQVEKEINESAPYLSTVCVYGG 231
[28][TOP]
>UniRef100_Q2HUZ8 Helicase, C-terminal; Zinc finger, CCHC-type; GUCT n=1 Tax=Medicago
truncatula RepID=Q2HUZ8_MEDTR
Length = 753
Score = 133 bits (335), Expect = 9e-30
Identities = 70/125 (56%), Positives = 92/125 (73%), Gaps = 2/125 (1%)
Frame = +3
Query: 204 DFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRART 383
DFP S N + L+I KL + ++V +L +GI++LFPIQRAVL PA++GRD+I RA+T
Sbjct: 95 DFPSRTTSINADELDISKLDLPSQLVDSLRDRGITQLFPIQRAVLVPALEGRDIIARAKT 154
Query: 384 GTGKTLAFGIPIMDKII--KFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTI 557
GTGKTLAFGIPI++ + + + + R R P AL LAPTRELAKQVEKE +SAP L T+
Sbjct: 155 GTGKTLAFGIPIINGLDDGQDSGPYSRRRLPRALVLAPTRELAKQVEKEIKESAPYLKTV 214
Query: 558 CVNGG 572
C+ GG
Sbjct: 215 CIYGG 219
[29][TOP]
>UniRef100_Q019E9 ATP-dependent RNA helicase (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q019E9_OSTTA
Length = 683
Score = 133 bits (334), Expect = 1e-29
Identities = 66/114 (57%), Positives = 85/114 (74%), Gaps = 2/114 (1%)
Frame = +3
Query: 246 EIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMD 425
++ G+SE V AL K+G+ LFPIQ+AVL PAM G+D++GRARTGTGKTLAF +P+++
Sbjct: 26 DVDNFGMSETTVQALRKRGVDALFPIQQAVLRPAMDGQDVVGRARTGTGKTLAFSLPVIE 85
Query: 426 KII-KFNAKHGRG-RDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTPI 581
K++ GRG R+P + LAPTRELAKQVE E + +AP LDT CV GGTPI
Sbjct: 86 KLLSNGRGSGGRGYRNPKCIVLAPTRELAKQVENEIFITAPTLDTACVYGGTPI 139
[30][TOP]
>UniRef100_A4RXF6 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RXF6_OSTLU
Length = 346
Score = 130 bits (327), Expect = 7e-29
Identities = 61/113 (53%), Positives = 87/113 (76%)
Frame = +3
Query: 243 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 422
+++ G+S V+AL K+G+ LFPIQ+AVL+PA+ G D++GRARTGTGKTLAF +P++
Sbjct: 1 MDVGNFGMSAITVAALRKRGVDTLFPIQQAVLKPALSGEDVVGRARTGTGKTLAFALPVI 60
Query: 423 DKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTPI 581
++++ + GR R+P + LAPTRELAKQVE E +AP+L+T+CV GGTPI
Sbjct: 61 ERLLT-DGTSGRSRNPKCIVLAPTRELAKQVENEICITAPSLETVCVYGGTPI 112
[31][TOP]
>UniRef100_Q8L7S8-2 Isoform 2 of DEAD-box ATP-dependent RNA helicase 3 n=1
Tax=Arabidopsis thaliana RepID=Q8L7S8-2
Length = 747
Score = 130 bits (327), Expect = 7e-29
Identities = 79/174 (45%), Positives = 104/174 (59%), Gaps = 19/174 (10%)
Frame = +3
Query: 108 LPVVARARHFHSNPVPLQFRASLPS--LAEFAVADFPYEEGSKND-------------EG 242
L +V R R HS+ + + + P+ L+E A + + D E
Sbjct: 42 LSLVRRTRRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEE 101
Query: 243 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 422
L I KL + + + +L K+GI+ LFPIQRAVL PA+QGRD+I RA+TGTGKTLAFGIPI+
Sbjct: 102 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 161
Query: 423 DKIIK----FNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGG 572
++ + + A GR P L LAPTRELAKQVEKE +SAP L T+CV GG
Sbjct: 162 KRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGG 215
[32][TOP]
>UniRef100_Q8L7S8 DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Arabidopsis thaliana
RepID=RH3_ARATH
Length = 748
Score = 130 bits (327), Expect = 7e-29
Identities = 79/174 (45%), Positives = 104/174 (59%), Gaps = 19/174 (10%)
Frame = +3
Query: 108 LPVVARARHFHSNPVPLQFRASLPS--LAEFAVADFPYEEGSKND-------------EG 242
L +V R R HS+ + + + P+ L+E A + + D E
Sbjct: 42 LSLVRRTRRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEE 101
Query: 243 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 422
L I KL + + + +L K+GI+ LFPIQRAVL PA+QGRD+I RA+TGTGKTLAFGIPI+
Sbjct: 102 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 161
Query: 423 DKIIK----FNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGG 572
++ + + A GR P L LAPTRELAKQVEKE +SAP L T+CV GG
Sbjct: 162 KRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGG 215
[33][TOP]
>UniRef100_B9N3Y9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Y9_POPTR
Length = 735
Score = 128 bits (321), Expect = 4e-28
Identities = 66/118 (55%), Positives = 85/118 (72%), Gaps = 4/118 (3%)
Frame = +3
Query: 231 NDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFG 410
+++ L+I KLG+ + +V L +GI+ LFPIQRAVL P ++GRD+I RA+TGTGKTLAFG
Sbjct: 92 SEDELDISKLGLPQRLVQTLQNRGITHLFPIQRAVLIPTLEGRDLIARAKTGTGKTLAFG 151
Query: 411 IPIMDKIIKFNAKHG----RGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGG 572
IPI+ ++ + G GR P L LAPTRELAKQVEKE +SAP L T+CV GG
Sbjct: 152 IPIIKRLTEDAELRGSQRRTGRLPKVLVLAPTRELAKQVEKEIKESAPYLSTVCVYGG 209
[34][TOP]
>UniRef100_B9N3Z4 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Z4_POPTR
Length = 775
Score = 127 bits (319), Expect = 6e-28
Identities = 68/132 (51%), Positives = 90/132 (68%), Gaps = 4/132 (3%)
Frame = +3
Query: 189 EFAVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMI 368
++A ++ + DE L++ KLG+ +V L +GI+ LFPIQRAVL PA++GRD+I
Sbjct: 116 DYASSETEPSSNTSEDE-LDVSKLGLPHRLVQTLQNRGITHLFPIQRAVLIPALEGRDLI 174
Query: 369 GRARTGTGKTLAFGIPIMDKIIKFNAKHG----RGRDPLALALAPTRELAKQVEKEFYDS 536
RA+TGTGKTLAFGIPI+ ++ + G GR P L LAPTRELAKQVEKE +S
Sbjct: 175 ARAKTGTGKTLAFGIPIIKRLTEDAELRGSQRRTGRLPKVLVLAPTRELAKQVEKEIKES 234
Query: 537 APNLDTICVNGG 572
AP L ++CV GG
Sbjct: 235 APYLSSVCVYGG 246
[35][TOP]
>UniRef100_UPI0001984A30 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984A30
Length = 764
Score = 126 bits (316), Expect = 1e-27
Identities = 65/117 (55%), Positives = 86/117 (73%), Gaps = 4/117 (3%)
Frame = +3
Query: 234 DEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGI 413
++ L + +LG+ +V +L ++GI+ LFPIQRAVL PA++GRD+I RA+TGTGKTLAFGI
Sbjct: 113 EDELALAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGI 172
Query: 414 PIMDKII----KFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGG 572
PI+ ++ K ++ GR P L LAPTRELAKQVEKE +SAP L T+CV GG
Sbjct: 173 PIIKRLSEDDEKRTSQRRSGRLPRVLVLAPTRELAKQVEKEIKESAPYLSTVCVYGG 229
[36][TOP]
>UniRef100_A5C4J0 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5C4J0_VITVI
Length = 786
Score = 126 bits (316), Expect = 1e-27
Identities = 65/117 (55%), Positives = 86/117 (73%), Gaps = 4/117 (3%)
Frame = +3
Query: 234 DEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGI 413
++ L + +LG+ +V +L ++GI+ LFPIQRAVL PA++GRD+I RA+TGTGKTLAFGI
Sbjct: 113 EDELALAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGI 172
Query: 414 PIMDKII----KFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGG 572
PI+ ++ K ++ GR P L LAPTRELAKQVEKE +SAP L T+CV GG
Sbjct: 173 PIIKRLSEDDEKRTSQRRSGRLPRVLVLAPTRELAKQVEKEIKESAPYLSTVCVYGG 229
[37][TOP]
>UniRef100_B9F737 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9F737_ORYSJ
Length = 697
Score = 125 bits (314), Expect = 2e-27
Identities = 69/133 (51%), Positives = 90/133 (67%), Gaps = 16/133 (12%)
Frame = +3
Query: 222 GSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQ--------------RAVLEPAMQGR 359
G +++ L I +LG+ E++VS L K+GI+ LFPIQ RAVL PA+ GR
Sbjct: 97 GEGDEDELAIARLGLPEQLVSTLEKRGITHLFPIQVSVLGGDSEGIGVSRAVLIPALDGR 156
Query: 360 DMIGRARTGTGKTLAFGIPIMDKIIKFNAKHG--RGRDPLALALAPTRELAKQVEKEFYD 533
D+I RA+TGTGKTLAFGIP++ ++++ + RGR P L LAPTRELAKQVEKE +
Sbjct: 157 DLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRIPRVLVLAPTRELAKQVEKEIKE 216
Query: 534 SAPNLDTICVNGG 572
SAP L T+CV GG
Sbjct: 217 SAPKLSTVCVYGG 229
[38][TOP]
>UniRef100_B8AMQ6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8AMQ6_ORYSI
Length = 779
Score = 125 bits (314), Expect = 2e-27
Identities = 69/133 (51%), Positives = 90/133 (67%), Gaps = 16/133 (12%)
Frame = +3
Query: 222 GSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQ--------------RAVLEPAMQGR 359
G +++ L I +LG+ E++VS L K+GI+ LFPIQ RAVL PA+ GR
Sbjct: 104 GEGDEDELAIARLGLPEQLVSTLEKRGITHLFPIQVSVLGGDSEGIGVSRAVLIPALDGR 163
Query: 360 DMIGRARTGTGKTLAFGIPIMDKIIKFNAKHG--RGRDPLALALAPTRELAKQVEKEFYD 533
D+I RA+TGTGKTLAFGIP++ ++++ + RGR P L LAPTRELAKQVEKE +
Sbjct: 164 DLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRIPRVLVLAPTRELAKQVEKEIKE 223
Query: 534 SAPNLDTICVNGG 572
SAP L T+CV GG
Sbjct: 224 SAPKLSTVCVYGG 236
[39][TOP]
>UniRef100_A7PRF1 Chromosome chr14 scaffold_27, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PRF1_VITVI
Length = 762
Score = 122 bits (307), Expect = 2e-26
Identities = 63/113 (55%), Positives = 84/113 (74%)
Frame = +3
Query: 234 DEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGI 413
++ L + +LG+ +V +L ++GI+ LFPIQRAVL PA++GRD+I RA+TGTGKTLAFGI
Sbjct: 113 EDELALAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGI 172
Query: 414 PIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGG 572
PI+ ++ + + K R L LAPTRELAKQVEKE +SAP L T+CV GG
Sbjct: 173 PIIKRLSEDDEKRTSQR---VLVLAPTRELAKQVEKEIKESAPYLSTVCVYGG 222
[40][TOP]
>UniRef100_C1E681 DEAD/DEAH box RNA helicase n=1 Tax=Micromonas sp. RCC299
RepID=C1E681_9CHLO
Length = 790
Score = 119 bits (297), Expect = 2e-25
Identities = 61/123 (49%), Positives = 85/123 (69%), Gaps = 1/123 (0%)
Frame = +3
Query: 216 EEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGK 395
E+ +K D + + +S+ +AL K+GI LFPIQ +VLEPA+QGRD++GRARTGTGK
Sbjct: 125 EDDNKRDP-MHVDNFPLSDITKAALRKRGIETLFPIQASVLEPALQGRDVVGRARTGTGK 183
Query: 396 TLAFGIPIMDKIIKF-NAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGG 572
TL F +PI++ ++ + + R R+P + LAPTRELA QVEKE + P+L T+CV GG
Sbjct: 184 TLGFSLPIIESLLSNPSNRTDRSRNPRCIVLAPTRELANQVEKEIQATVPSLRTLCVYGG 243
Query: 573 TPI 581
I
Sbjct: 244 VAI 246
[41][TOP]
>UniRef100_C0P7U9 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C0P7U9_MAIZE
Length = 483
Score = 118 bits (295), Expect = 4e-25
Identities = 58/78 (74%), Positives = 68/78 (87%)
Frame = +3
Query: 348 MQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEF 527
MQGRDM+GRA+TGTGKTLAFGIPIMD II+ N K+ G+ PLA+ LAPTRELAKQVE+EF
Sbjct: 1 MQGRDMVGRAKTGTGKTLAFGIPIMDAIIRHNEKYKPGKFPLAIVLAPTRELAKQVEREF 60
Query: 528 YDSAPNLDTICVNGGTPI 581
DS+P L+T+CV GGTPI
Sbjct: 61 LDSSP-LETLCVYGGTPI 77
[42][TOP]
>UniRef100_C1MMH8 DEAD/DEAH box RNA helicase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MMH8_9CHLO
Length = 803
Score = 116 bits (290), Expect = 1e-24
Identities = 60/119 (50%), Positives = 78/119 (65%)
Frame = +3
Query: 225 SKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLA 404
+KN + I IS +AL K+GI LFPIQ AVL PA++GRD++GRARTGTGKTL
Sbjct: 138 AKNSDPNHIDNFPISVLTKAALRKRGIESLFPIQSAVLAPALEGRDIVGRARTGTGKTLG 197
Query: 405 FGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTPI 581
F +PI++ ++ N R R P + LAPTRELA QVE E + P++ T+CV GG I
Sbjct: 198 FSLPIIESLLS-NPSDARNRRPRCIVLAPTRELANQVEAEIQLTVPSMRTVCVYGGVAI 255
[43][TOP]
>UniRef100_A8JGT1 RNA helicase n=1 Tax=Chlamydomonas reinhardtii RepID=A8JGT1_CHLRE
Length = 737
Score = 110 bits (275), Expect = 8e-23
Identities = 59/119 (49%), Positives = 80/119 (67%), Gaps = 7/119 (5%)
Frame = +3
Query: 243 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 422
L + + +SE++ S L + I LFPIQ LEPAM+G D++GRARTG GKTLAF +P++
Sbjct: 104 LGLDRFKLSEQVKSMLRSQNIESLFPIQAMTLEPAMEGLDVVGRARTGCGKTLAFTVPVV 163
Query: 423 DKIIKFNAK-----HGRGRDPLALALAPTRELAKQVEKEFYDS--APNLDTICVNGGTP 578
++II G GR P+ + LAPTRELAKQV++ F ++ A NL T+CV GGTP
Sbjct: 164 ERIIAEQKSGSGIGRGAGRLPVCIVLAPTRELAKQVQEVFANTGKAANLYTMCVYGGTP 222
[44][TOP]
>UniRef100_B3RVR9 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3RVR9_TRIAD
Length = 633
Score = 105 bits (263), Expect = 2e-21
Identities = 54/122 (44%), Positives = 77/122 (63%)
Frame = +3
Query: 213 YEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTG 392
++ GS ++G + KK IS I +L ++GI+ LFPIQ + G+D+IG+ARTGTG
Sbjct: 43 HDSGSMEEKG-DFKKFRISSAIADSLKERGITYLFPIQAQTFDYVYDGQDVIGQARTGTG 101
Query: 393 KTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGG 572
KTL+F +PI +K+IK + R P L LAPTRELA Q+ EF + +L +C+ GG
Sbjct: 102 KTLSFALPITEKLIKKKRSDDKIRPPKVLVLAPTRELAIQITSEFKALSGSLKVVCIYGG 161
Query: 573 TP 578
P
Sbjct: 162 VP 163
[45][TOP]
>UniRef100_A9UPZ2 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UPZ2_MONBE
Length = 591
Score = 104 bits (259), Expect = 6e-21
Identities = 50/94 (53%), Positives = 68/94 (72%)
Frame = +3
Query: 297 KGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLA 476
KG +KLF IQ P ++G+D++G+ARTG GKTL+F +PI++ ++K ++GRGR P A
Sbjct: 17 KGYTKLFEIQSRTFTPILEGKDILGKARTGEGKTLSFALPIIELLLK-EGRNGRGRAPRA 75
Query: 477 LALAPTRELAKQVEKEFYDSAPNLDTICVNGGTP 578
L +APTRELA QV KEF D P+L + CV GG P
Sbjct: 76 LCMAPTRELAHQVGKEFADIGPSLASTCVYGGAP 109
[46][TOP]
>UniRef100_Q8K2L4 Ddx21 protein (Fragment) n=2 Tax=Mus musculus RepID=Q8K2L4_MOUSE
Length = 689
Score = 102 bits (254), Expect = 2e-20
Identities = 62/144 (43%), Positives = 79/144 (54%), Gaps = 8/144 (5%)
Frame = +3
Query: 171 SLPSLAEFAVADFPYEEGSKNDEG---LEIKK-----LGISEEIVSALAKKGISKLFPIQ 326
S PS + +D P EE S E +E K+ ISEE V L +G++ LFPIQ
Sbjct: 64 SQPSEPKSNSSDAPGEESSSETEKEIPVEQKEGAFSNFPISEETVKLLKARGVNFLFPIQ 123
Query: 327 RAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELA 506
G+D+I +ARTGTGKT +F IP+++K+ + RGR P L LAPTRELA
Sbjct: 124 AKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLQGGLQERKRGRAPQVLVLAPTRELA 183
Query: 507 KQVEKEFYDSAPNLDTICVNGGTP 578
QV K+F D L C GGTP
Sbjct: 184 NQVSKDFSDITKKLSVACFYGGTP 207
[47][TOP]
>UniRef100_Q6PCP0 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1 Tax=Mus musculus
RepID=Q6PCP0_MOUSE
Length = 851
Score = 102 bits (254), Expect = 2e-20
Identities = 62/144 (43%), Positives = 79/144 (54%), Gaps = 8/144 (5%)
Frame = +3
Query: 171 SLPSLAEFAVADFPYEEGSKNDEG---LEIKK-----LGISEEIVSALAKKGISKLFPIQ 326
S PS + +D P EE S E +E K+ ISEE V L +G++ LFPIQ
Sbjct: 226 SQPSEPKSNSSDAPGEESSSETEKEIPVEQKEGAFSNFPISEETVKLLKARGVNFLFPIQ 285
Query: 327 RAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELA 506
G+D+I +ARTGTGKT +F IP+++K+ + RGR P L LAPTRELA
Sbjct: 286 AKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLQGGLQERKRGRAPQVLVLAPTRELA 345
Query: 507 KQVEKEFYDSAPNLDTICVNGGTP 578
QV K+F D L C GGTP
Sbjct: 346 NQVSKDFSDITKKLSVACFYGGTP 369
[48][TOP]
>UniRef100_Q3ULC7 Putative uncharacterized protein n=1 Tax=Mus musculus
RepID=Q3ULC7_MOUSE
Length = 851
Score = 102 bits (254), Expect = 2e-20
Identities = 62/144 (43%), Positives = 79/144 (54%), Gaps = 8/144 (5%)
Frame = +3
Query: 171 SLPSLAEFAVADFPYEEGSKNDEG---LEIKK-----LGISEEIVSALAKKGISKLFPIQ 326
S PS + +D P EE S E +E K+ ISEE V L +G++ LFPIQ
Sbjct: 226 SQPSEPKSNSSDAPGEESSSETEKEIPVEQKEGAFSNFPISEETVKLLKARGVNFLFPIQ 285
Query: 327 RAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELA 506
G+D+I +ARTGTGKT +F IP+++K+ + RGR P L LAPTRELA
Sbjct: 286 AKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLQGGLQERKRGRAPQVLVLAPTRELA 345
Query: 507 KQVEKEFYDSAPNLDTICVNGGTP 578
QV K+F D L C GGTP
Sbjct: 346 NQVSKDFSDITKKLSVACFYGGTP 369
[49][TOP]
>UniRef100_Q3TVJ3 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1 Tax=Mus musculus
RepID=Q3TVJ3_MOUSE
Length = 851
Score = 102 bits (254), Expect = 2e-20
Identities = 62/144 (43%), Positives = 79/144 (54%), Gaps = 8/144 (5%)
Frame = +3
Query: 171 SLPSLAEFAVADFPYEEGSKNDEG---LEIKK-----LGISEEIVSALAKKGISKLFPIQ 326
S PS + +D P EE S E +E K+ ISEE V L +G++ LFPIQ
Sbjct: 226 SQPSEPKSNSSDAPGEESSSETEKEIPVEQKEGAFSNFPISEETVKLLKARGVNFLFPIQ 285
Query: 327 RAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELA 506
G+D+I +ARTGTGKT +F IP+++K+ + RGR P L LAPTRELA
Sbjct: 286 AKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLQGGLQERKRGRAPQVLVLAPTRELA 345
Query: 507 KQVEKEFYDSAPNLDTICVNGGTP 578
QV K+F D L C GGTP
Sbjct: 346 NQVSKDFSDITKKLSVACFYGGTP 369
[50][TOP]
>UniRef100_B9N3Z1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Z1_POPTR
Length = 377
Score = 102 bits (254), Expect = 2e-20
Identities = 56/126 (44%), Positives = 78/126 (61%), Gaps = 8/126 (6%)
Frame = +3
Query: 219 EGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKT 398
E ++ ++ L+I L + + ++ L +GI+ LF IQRAVL PA++GRD+I R + TGK
Sbjct: 65 ETTRPNDQLDISNLCLPQRLIQTLHTQGITILFTIQRAVLVPALEGRDIIARVKNRTGKA 124
Query: 399 LAFGIPIMDKIIKFNAKH--------GRGRDPLALALAPTRELAKQVEKEFYDSAPNLDT 554
LAFGIPI+ ++ + + GR P L L PTR LAKQVEKE SAP L+T
Sbjct: 125 LAFGIPIIKRLTEQTSSQILIMPHIMPNGRLPRVLVLTPTRVLAKQVEKEMKRSAPYLNT 184
Query: 555 ICVNGG 572
+C GG
Sbjct: 185 VCAYGG 190
[51][TOP]
>UniRef100_Q9JIK5 Nucleolar RNA helicase 2 n=1 Tax=Mus musculus RepID=DDX21_MOUSE
Length = 851
Score = 102 bits (254), Expect = 2e-20
Identities = 62/144 (43%), Positives = 79/144 (54%), Gaps = 8/144 (5%)
Frame = +3
Query: 171 SLPSLAEFAVADFPYEEGSKNDEG---LEIKK-----LGISEEIVSALAKKGISKLFPIQ 326
S PS + +D P EE S E +E K+ ISEE V L +G++ LFPIQ
Sbjct: 226 SQPSEPKSNSSDAPGEESSSETEKEIPVEQKEGAFSNFPISEETVKLLKARGVNFLFPIQ 285
Query: 327 RAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELA 506
G+D+I +ARTGTGKT +F IP+++K+ + RGR P L LAPTRELA
Sbjct: 286 AKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLQGGLQERKRGRAPQVLVLAPTRELA 345
Query: 507 KQVEKEFYDSAPNLDTICVNGGTP 578
QV K+F D L C GGTP
Sbjct: 346 NQVSKDFSDITKKLSVACFYGGTP 369
[52][TOP]
>UniRef100_UPI0000F2E9EA PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 n=1
Tax=Monodelphis domestica RepID=UPI0000F2E9EA
Length = 744
Score = 101 bits (251), Expect = 5e-20
Identities = 49/105 (46%), Positives = 66/105 (62%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISEE + L +G++ LFPIQ P +G+D+I +ARTGTGKT +F IP+++K+ +
Sbjct: 149 ISEETIKLLKARGVTYLFPIQVKAFSPVYEGKDLIAQARTGTGKTFSFAIPLIEKLQRDQ 208
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTP 578
+ + R P L LAPTRELA QV K+F D L C GGTP
Sbjct: 209 EELKKTRSPKVLVLAPTRELANQVAKDFQDITRKLSVACFYGGTP 253
[53][TOP]
>UniRef100_A8J6S5 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii
RepID=A8J6S5_CHLRE
Length = 384
Score = 101 bits (251), Expect = 5e-20
Identities = 52/118 (44%), Positives = 73/118 (61%), Gaps = 6/118 (5%)
Frame = +3
Query: 246 EIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMD 425
+I LG+S E + ALA +GI LFP+Q VLEP GRD++ RA+TG+GKTLAF +P+++
Sbjct: 15 QIANLGLSPETMDALANRGIFSLFPVQAQVLEPIASGRDVVCRAKTGSGKTLAFALPVVE 74
Query: 426 KIIKFN------AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTPI 581
+++ + + +GR P + LAPTRELA QV +EF P L GG I
Sbjct: 75 NLLEVSGLRRPRTRPRKGRSPRCVVLAPTRELANQVSREFESVCPALKVDSFYGGVSI 132
[54][TOP]
>UniRef100_UPI0001B7AF73 UPI0001B7AF73 related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7AF73
Length = 659
Score = 100 bits (249), Expect = 8e-20
Identities = 59/146 (40%), Positives = 75/146 (51%)
Frame = +3
Query: 141 SNPVPLQFRASLPSLAEFAVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFP 320
S+P P P + P E+ EG ISEE V L +G++ LFP
Sbjct: 37 SHPKPDSSSTQAPGEESETEKEIPVEQ----KEGA-FSNFPISEETVKLLKARGVNFLFP 91
Query: 321 IQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRE 500
IQ G+D+I +ARTGTGKT +F IP+++K+ + RGR P L LAPTRE
Sbjct: 92 IQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLQGGLQERKRGRAPQVLVLAPTRE 151
Query: 501 LAKQVEKEFYDSAPNLDTICVNGGTP 578
LA QV K+F D L C GGTP
Sbjct: 152 LANQVSKDFSDITKKLSVACFYGGTP 177
[55][TOP]
>UniRef100_C1MQ70 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MQ70_9CHLO
Length = 748
Score = 100 bits (249), Expect = 8e-20
Identities = 56/144 (38%), Positives = 80/144 (55%), Gaps = 7/144 (4%)
Frame = +3
Query: 168 ASLPSLAEFAVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPA 347
A P+ + +D E+ S D+ L + IS E+ + L KGI+ L+ IQ +
Sbjct: 102 APAPATPSASKSDEANEDASPEDDPLRVSNFNISREVCARLETKGITSLYGIQAQTFQHV 161
Query: 348 MQGRDMIGRARTGTGKTLAFGIPIMDKI-----IKFNAKHGRGRDPLALALAPTRELAKQ 512
+ G+D++ RA+TG GKTLAF +PI++ I + N + +GR P+ LAPTRELAKQ
Sbjct: 162 LDGKDIVARAKTGCGKTLAFVLPIVEAINREHPVPANGRRAQGRAPVVALLAPTRELAKQ 221
Query: 513 VEKEF--YDSAPNLDTICVNGGTP 578
V +F A L ICV GG P
Sbjct: 222 VHADFQHIGHAFKLTAICVYGGAP 245
[56][TOP]
>UniRef100_B9ICY7 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9ICY7_POPTR
Length = 657
Score = 100 bits (249), Expect = 8e-20
Identities = 57/125 (45%), Positives = 74/125 (59%), Gaps = 6/125 (4%)
Frame = +3
Query: 216 EEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGK 395
EE K ++ + + ISE + L K+GI LFPIQ E + G D++GRARTG GK
Sbjct: 70 EEEVKAEDPNAVTRFRISEPLREVLKKRGIEALFPIQARTFEDILNGGDLVGRARTGQGK 129
Query: 396 TLAFGIPIMDKII----KFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTI 557
TLAF +PI++ ++ K + K G GR P L L PTRELA QV +F Y A LD+
Sbjct: 130 TLAFVLPILESLVNGLAKASRKTGYGRPPSVLVLLPTRELATQVFDDFKVYGGAMGLDSC 189
Query: 558 CVNGG 572
CV GG
Sbjct: 190 CVYGG 194
[57][TOP]
>UniRef100_B9I4I4 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I4I4_POPTR
Length = 652
Score = 100 bits (249), Expect = 8e-20
Identities = 57/125 (45%), Positives = 76/125 (60%), Gaps = 6/125 (4%)
Frame = +3
Query: 216 EEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGK 395
EE K ++ + + ISE + AL K+GI LFPIQ E + G D++GRARTG GK
Sbjct: 54 EEEVKAEDPNAVTRFRISEPLREALKKRGIEALFPIQARTFEDILNGCDLVGRARTGQGK 113
Query: 396 TLAFGIPIMDKII----KFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTI 557
TLAF +PI++ ++ K + K G GR P L L PTRELA QV ++F Y A L++
Sbjct: 114 TLAFVLPILESLVNGPAKASRKTGYGRPPSVLVLLPTRELATQVFEDFKVYGGAVGLNSC 173
Query: 558 CVNGG 572
CV GG
Sbjct: 174 CVYGG 178
[58][TOP]
>UniRef100_Q3B8Q1 Nucleolar RNA helicase 2 n=1 Tax=Rattus norvegicus RepID=DDX21_RAT
Length = 782
Score = 100 bits (249), Expect = 8e-20
Identities = 59/146 (40%), Positives = 75/146 (51%)
Frame = +3
Query: 141 SNPVPLQFRASLPSLAEFAVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFP 320
S+P P P + P E+ EG ISEE V L +G++ LFP
Sbjct: 153 SHPKPDSSSTQAPGEESETEKEIPVEQ----KEGA-FSNFPISEETVKLLKARGVNFLFP 207
Query: 321 IQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRE 500
IQ G+D+I +ARTGTGKT +F IP+++K+ + RGR P L LAPTRE
Sbjct: 208 IQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLQGGLQERKRGRAPQVLVLAPTRE 267
Query: 501 LAKQVEKEFYDSAPNLDTICVNGGTP 578
LA QV K+F D L C GGTP
Sbjct: 268 LANQVSKDFSDITKKLSVACFYGGTP 293
[59][TOP]
>UniRef100_UPI000180B7AC PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1
Tax=Ciona intestinalis RepID=UPI000180B7AC
Length = 672
Score = 99.8 bits (247), Expect = 1e-19
Identities = 50/105 (47%), Positives = 69/105 (65%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
I+E+ L KKG++ LFPIQ G+D++ +ARTGTGKTL+F IP+++K+I N
Sbjct: 97 ITEQTKVLLKKKGVAYLFPIQIQSFNHVYDGKDVVAQARTGTGKTLSFAIPLVEKLI-MN 155
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTP 578
GR P L +APTRELA QV K+F D + L ++C+ GGTP
Sbjct: 156 RCKDYGRPPKVLVMAPTRELAIQVRKDFQDISQGLSSVCIYGGTP 200
[60][TOP]
>UniRef100_Q9M6R6 RNA helicase n=1 Tax=Vigna radiata var. radiata RepID=Q9M6R6_PHAAU
Length = 713
Score = 99.8 bits (247), Expect = 1e-19
Identities = 56/127 (44%), Positives = 75/127 (59%), Gaps = 6/127 (4%)
Frame = +3
Query: 216 EEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGK 395
E+ K ++ + KL ISE + L +KGI LFPIQ + + G D++GRARTG GK
Sbjct: 120 EKEEKKEDPNAVSKLRISEPLRLKLKEKGIESLFPIQAMTFDLVLDGSDLVGRARTGQGK 179
Query: 396 TLAFGIPIMDKII----KFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTI 557
TLAF +PI++ +I K + K G GR P L L PTRELA +V +F Y A L +
Sbjct: 180 TLAFVLPILESLINGPTKSSRKTGYGRTPSVLVLLPTRELACRVHADFEVYGGAMGLSSC 239
Query: 558 CVNGGTP 578
C+ GG P
Sbjct: 240 CLYGGAP 246
[61][TOP]
>UniRef100_UPI0000ECB487 ATP-dependent RNA helicase DDX50 (EC 3.6.1.-) (DEAD box protein 50)
(Nucleolar protein Gu2) (Gu-beta). n=2 Tax=Gallus gallus
RepID=UPI0000ECB487
Length = 693
Score = 99.4 bits (246), Expect = 2e-19
Identities = 48/105 (45%), Positives = 65/105 (61%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
IS+ + L +G++ LFP+Q P G+D+I +ARTGTGKT +F IP+++K+ +
Sbjct: 120 ISKGTIQLLQARGVTYLFPVQVKTFNPVYSGKDVIAQARTGTGKTFSFAIPLIEKLQADS 179
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTP 578
+ RGR P L LAPTRELA QV K+F D L C GGTP
Sbjct: 180 QERRRGRSPKVLVLAPTRELANQVAKDFKDITRKLTVACFYGGTP 224
[62][TOP]
>UniRef100_UPI0000D9C370 PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21
isoform 1 n=1 Tax=Macaca mulatta RepID=UPI0000D9C370
Length = 697
Score = 99.4 bits (246), Expect = 2e-19
Identities = 55/131 (41%), Positives = 71/131 (54%)
Frame = +3
Query: 186 AEFAVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDM 365
+E + D E + EG ISEE + L +G++ LFPIQ G+D+
Sbjct: 168 SEESNGDIDQEISVEQKEGA-FSNFPISEETIKLLKGRGVTFLFPIQAKTFHHVYSGKDL 226
Query: 366 IGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPN 545
I +ARTGTGKT +F IP+++K+ RGR P L LAPTRELA QV K+F D
Sbjct: 227 IAQARTGTGKTFSFAIPLIEKLHGELQDRKRGRPPQVLVLAPTRELANQVSKDFSDITKK 286
Query: 546 LDTICVNGGTP 578
L C GGTP
Sbjct: 287 LSVACFYGGTP 297
[63][TOP]
>UniRef100_UPI0000D9C36F PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21
isoform 3 n=1 Tax=Macaca mulatta RepID=UPI0000D9C36F
Length = 783
Score = 99.4 bits (246), Expect = 2e-19
Identities = 55/131 (41%), Positives = 71/131 (54%)
Frame = +3
Query: 186 AEFAVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDM 365
+E + D E + EG ISEE + L +G++ LFPIQ G+D+
Sbjct: 168 SEESNGDIDQEISVEQKEGA-FSNFPISEETIKLLKGRGVTFLFPIQAKTFHHVYSGKDL 226
Query: 366 IGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPN 545
I +ARTGTGKT +F IP+++K+ RGR P L LAPTRELA QV K+F D
Sbjct: 227 IAQARTGTGKTFSFAIPLIEKLHGELQDRKRGRPPQVLVLAPTRELANQVSKDFSDITKK 286
Query: 546 LDTICVNGGTP 578
L C GGTP
Sbjct: 287 LSVACFYGGTP 297
[64][TOP]
>UniRef100_UPI0000D9C36E PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21
isoform 2 n=1 Tax=Macaca mulatta RepID=UPI0000D9C36E
Length = 745
Score = 99.4 bits (246), Expect = 2e-19
Identities = 55/131 (41%), Positives = 71/131 (54%)
Frame = +3
Query: 186 AEFAVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDM 365
+E + D E + EG ISEE + L +G++ LFPIQ G+D+
Sbjct: 168 SEESNGDIDQEISVEQKEGA-FSNFPISEETIKLLKGRGVTFLFPIQAKTFHHVYSGKDL 226
Query: 366 IGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPN 545
I +ARTGTGKT +F IP+++K+ RGR P L LAPTRELA QV K+F D
Sbjct: 227 IAQARTGTGKTFSFAIPLIEKLHGELQDRKRGRPPQVLVLAPTRELANQVSKDFSDITKK 286
Query: 546 LDTICVNGGTP 578
L C GGTP
Sbjct: 287 LSVACFYGGTP 297
[65][TOP]
>UniRef100_Q1J0S9 DEAD/DEAH box helicase-like protein n=1 Tax=Deinococcus
geothermalis DSM 11300 RepID=Q1J0S9_DEIGD
Length = 591
Score = 99.4 bits (246), Expect = 2e-19
Identities = 52/105 (49%), Positives = 71/105 (67%), Gaps = 2/105 (1%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
I+ E+ + LA++GI++ PIQ L + G+D+IGRARTGTGKTLAF +PI+ + +
Sbjct: 7 IAPELAARLAERGITEASPIQAESLPHTLAGKDLIGRARTGTGKTLAFALPIIQNLTAPD 66
Query: 444 AK--HGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGG 572
+ RGR P A+ +APTRELAKQV +EF S P L T+ V GG
Sbjct: 67 GRGSRERGRLPRAIVIAPTRELAKQVAEEFSKSGPQLSTVTVYGG 111
[66][TOP]
>UniRef100_A4RW46 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RW46_OSTLU
Length = 654
Score = 99.0 bits (245), Expect = 2e-19
Identities = 53/119 (44%), Positives = 75/119 (63%), Gaps = 7/119 (5%)
Frame = +3
Query: 243 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 422
L + +SE + + L KKG LF IQ LE A+ G+D++GRARTG GKTLAF +PI+
Sbjct: 83 LALDNFALSEPVKATLRKKGFDALFAIQAETLEIALSGKDVVGRARTGCGKTLAFVLPIV 142
Query: 423 DKIIKF-----NAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVNGGTP 578
+++ K N + +GR P+ + LAPTRELAKQV +F ++ ++CV GGTP
Sbjct: 143 EEMAKISPMPANGRRVQGRRPMCVVLAPTRELAKQVFADFDWIGNSFGFKSVCVYGGTP 201
[67][TOP]
>UniRef100_A4FV23 DDX21 protein n=1 Tax=Bos taurus RepID=A4FV23_BOVIN
Length = 784
Score = 99.0 bits (245), Expect = 2e-19
Identities = 49/105 (46%), Positives = 64/105 (60%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISEE + L +G++ LFPIQ G+D+I +ARTGTGKT +F IP+++K++
Sbjct: 194 ISEETIKLLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLVEKLLGEL 253
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTP 578
RGR P L LAPTRELA QV ++F D L C GGTP
Sbjct: 254 QDRKRGRAPQVLVLAPTRELASQVSRDFSDITKKLAVACFYGGTP 298
[68][TOP]
>UniRef100_UPI000194C8EA PREDICTED: hypothetical protein n=1 Tax=Taeniopygia guttata
RepID=UPI000194C8EA
Length = 708
Score = 98.6 bits (244), Expect = 3e-19
Identities = 49/105 (46%), Positives = 65/105 (61%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
IS+E V L +G++ LFP+Q P G+D+I +ARTGTGKT +F IP+++K+ +
Sbjct: 135 ISKETVQLLQARGVTYLFPVQVKTFNPVYTGKDVIAQARTGTGKTFSFAIPLIEKLQGES 194
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTP 578
+ RGR P L L PTRELA QV K+F D L C GGTP
Sbjct: 195 QERRRGRPPKVLVLCPTRELANQVAKDFKDITRKLTVGCFYGGTP 239
[69][TOP]
>UniRef100_UPI000179595A PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1
Tax=Equus caballus RepID=UPI000179595A
Length = 785
Score = 98.6 bits (244), Expect = 3e-19
Identities = 49/105 (46%), Positives = 64/105 (60%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISEE + L +G++ LFPIQ G+D+I +ARTGTGKT +F IP+++K+ +
Sbjct: 195 ISEETIKLLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLQREL 254
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTP 578
RGR P L LAPTRELA QV ++F D L C GGTP
Sbjct: 255 QDRKRGRAPQVLVLAPTRELANQVSRDFSDITKKLAVACFYGGTP 299
[70][TOP]
>UniRef100_UPI0000E48294 PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a
n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48294
Length = 657
Score = 98.6 bits (244), Expect = 3e-19
Identities = 54/124 (43%), Positives = 75/124 (60%), Gaps = 4/124 (3%)
Frame = +3
Query: 216 EEGSKNDEGLE----IKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRART 383
++G ++E E GI + + L KG+ LFPIQ +P G D+I +ART
Sbjct: 89 KQGEVDEETQEKIGAFSNFGIRPKTIEKLHAKGVKYLFPIQAQTFKPIDDGFDVIAQART 148
Query: 384 GTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICV 563
GTGKTL+F +P+++K +F K GR P+ LALAPTRELAKQ+ + F P+L T C+
Sbjct: 149 GTGKTLSFVLPLVEKWQQFPQK--SGRQPIILALAPTRELAKQISEYFEAIGPHLSTTCI 206
Query: 564 NGGT 575
GGT
Sbjct: 207 YGGT 210
[71][TOP]
>UniRef100_UPI00004E8925 PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1 Tax=Pan
troglodytes RepID=UPI00004E8925
Length = 783
Score = 98.6 bits (244), Expect = 3e-19
Identities = 50/105 (47%), Positives = 63/105 (60%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISEE + L +G++ LFPIQ G+D+I +ARTGTGKT +F IP+++K+
Sbjct: 193 ISEETIKLLKGRGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLHGEL 252
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTP 578
RGR P L LAPTRELA QV K+F D L C GGTP
Sbjct: 253 QDRKRGRAPQVLVLAPTRELANQVSKDFSDITKKLSVACFYGGTP 297
[72][TOP]
>UniRef100_Q72GF3 Heat resistant RNA dependent ATPase n=1 Tax=Thermus thermophilus
HB27 RepID=Q72GF3_THET2
Length = 517
Score = 98.6 bits (244), Expect = 3e-19
Identities = 53/113 (46%), Positives = 71/113 (62%)
Frame = +3
Query: 237 EGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP 416
+ +E K + EI+ AL +G++ PIQ A L A++G+D+IG+ARTGTGKTLAF +P
Sbjct: 6 QSMEFKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALP 65
Query: 417 IMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
I +++ RGR P AL L PTRELA QV E AP+L + V GGT
Sbjct: 66 IAERLA---PSQERGRKPRALVLTPTRELALQVASELTAVAPHLKVVAVYGGT 115
[73][TOP]
>UniRef100_Q5SM34 ATP-dependent RNA helicase n=2 Tax=Thermus thermophilus
RepID=Q5SM34_THET8
Length = 517
Score = 98.6 bits (244), Expect = 3e-19
Identities = 53/113 (46%), Positives = 71/113 (62%)
Frame = +3
Query: 237 EGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP 416
+ +E K + EI+ AL +G++ PIQ A L A++G+D+IG+ARTGTGKTLAF +P
Sbjct: 6 QSMEFKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALP 65
Query: 417 IMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
I +++ RGR P AL L PTRELA QV E AP+L + V GGT
Sbjct: 66 IAERLA---PSQERGRKPRALVLTPTRELALQVASELTAVAPHLKVVAVYGGT 115
[74][TOP]
>UniRef100_B7A6V9 DEAD/DEAH box helicase domain protein n=1 Tax=Thermus aquaticus
Y51MC23 RepID=B7A6V9_THEAQ
Length = 513
Score = 98.6 bits (244), Expect = 3e-19
Identities = 55/111 (49%), Positives = 70/111 (63%)
Frame = +3
Query: 243 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 422
+E K + +EI AL +GI+ PIQ A L A++G+D+IG+ARTGTGKTLAF +PI
Sbjct: 1 MEFKDFPLKDEIKEALYGRGITAPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIA 60
Query: 423 DKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
++ A RGR P AL L PTRELA QV E AP+L + V GGT
Sbjct: 61 QRL---EASRQRGRKPRALVLTPTRELALQVASEVAALAPHLKVVPVYGGT 108
[75][TOP]
>UniRef100_Q9NR30 Nucleolar RNA helicase 2 n=2 Tax=Homo sapiens RepID=DDX21_HUMAN
Length = 783
Score = 98.6 bits (244), Expect = 3e-19
Identities = 50/105 (47%), Positives = 63/105 (60%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISEE + L +G++ LFPIQ G+D+I +ARTGTGKT +F IP+++K+
Sbjct: 193 ISEETIKLLKGRGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLHGEL 252
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTP 578
RGR P L LAPTRELA QV K+F D L C GGTP
Sbjct: 253 QDRKRGRAPQVLVLAPTRELANQVSKDFSDITKKLSVACFYGGTP 297
[76][TOP]
>UniRef100_UPI0001984F7F PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984F7F
Length = 711
Score = 98.2 bits (243), Expect = 4e-19
Identities = 56/133 (42%), Positives = 73/133 (54%), Gaps = 6/133 (4%)
Frame = +3
Query: 198 VADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRA 377
V + EEG + + ISE + L KGI LFPIQ + + G D++GRA
Sbjct: 104 VPEMEEEEGKAEENPNALSNFRISEPLREKLKSKGIEALFPIQAMTFDTILDGSDLVGRA 163
Query: 378 RTGTGKTLAFGIPIMDKII----KFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSA 539
RTG GKTLAF +PI++ +I + + K G GR P L L PTRELA QV +F Y A
Sbjct: 164 RTGQGKTLAFVLPILESLINGPNRGSRKTGYGRPPCVLVLLPTRELATQVYADFDVYGGA 223
Query: 540 PNLDTICVNGGTP 578
L + C+ GG P
Sbjct: 224 IGLTSCCLYGGAP 236
[77][TOP]
>UniRef100_C1CWT4 Putative DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Deinococcus
deserti VCD115 RepID=C1CWT4_DEIDV
Length = 602
Score = 98.2 bits (243), Expect = 4e-19
Identities = 53/103 (51%), Positives = 68/103 (66%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
I+ E+ + LA++GI++ PIQ L + GRDMIGRARTGTGKTLAF +PI+ K+
Sbjct: 7 IAPELAARLAERGITEASPIQAESLPLTLAGRDMIGRARTGTGKTLAFALPIIQKL---E 63
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGG 572
R R P A+ +APTRELAKQV +EF S L T+ V GG
Sbjct: 64 PSRERARPPRAIVVAPTRELAKQVAEEFSKSGVGLTTVTVYGG 106
[78][TOP]
>UniRef100_A9SDC8 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SDC8_PHYPA
Length = 689
Score = 98.2 bits (243), Expect = 4e-19
Identities = 52/116 (44%), Positives = 67/116 (57%), Gaps = 4/116 (3%)
Frame = +3
Query: 243 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 422
+ + I + + L KGI LFPIQ E G DM+GRARTG GKTLAF +P++
Sbjct: 110 MAVSNFNIGKALRDKLKAKGIESLFPIQAQTFEAVFDGNDMVGRARTGQGKTLAFVLPVL 169
Query: 423 DKIIK--FNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVNGGTP 578
+ + + + RGR + LAPTRELAKQV +F Y SA L T+CV GG P
Sbjct: 170 ESLSQSGYTKNLQRGRAAAVIVLAPTRELAKQVHADFETYGSAVGLSTVCVYGGAP 225
[79][TOP]
>UniRef100_UPI0000F2E9E9 PREDICTED: similar to Gu protein n=1 Tax=Monodelphis domestica
RepID=UPI0000F2E9E9
Length = 902
Score = 97.8 bits (242), Expect = 5e-19
Identities = 49/105 (46%), Positives = 64/105 (60%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISEE + L +G++ LFPIQ G+D+I +ARTGTGKT +F IP+++K+ +
Sbjct: 346 ISEETIQLLKARGVTYLFPIQAKTFHHVSSGKDLIAQARTGTGKTFSFAIPLVEKLQGDS 405
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTP 578
RGR P L LAPTREL+ QV K+F D L C GGTP
Sbjct: 406 QPRPRGRAPKILVLAPTRELSIQVSKDFSDITKKLTVACFYGGTP 450
[80][TOP]
>UniRef100_UPI00017F0088 PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 50, partial n=1
Tax=Sus scrofa RepID=UPI00017F0088
Length = 507
Score = 97.4 bits (241), Expect = 7e-19
Identities = 52/136 (38%), Positives = 75/136 (55%)
Frame = +3
Query: 168 ASLPSLAEFAVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPA 347
+SL S + + P E ++ + ISEE + L +G++ LFPIQ P
Sbjct: 112 SSLDSSTHKSSDNKPEESLTREQKEGAFSNFPISEETIKLLKGRGVTYLFPIQVKTFGPV 171
Query: 348 MQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEF 527
+G+D+I +ARTGTGKT +F IP+++++ + + R P L LAPTRELA QV K+F
Sbjct: 172 YEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDF 231
Query: 528 YDSAPNLDTICVNGGT 575
D L C GGT
Sbjct: 232 KDITKKLSVACFYGGT 247
[81][TOP]
>UniRef100_A7QGV9 Chromosome chr16 scaffold_94, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QGV9_VITVI
Length = 600
Score = 97.4 bits (241), Expect = 7e-19
Identities = 55/127 (43%), Positives = 71/127 (55%), Gaps = 6/127 (4%)
Frame = +3
Query: 216 EEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGK 395
EEG + + ISE + L KGI LFPIQ + + G D++GRARTG GK
Sbjct: 4 EEGKAEENPNALSNFRISEPLREKLKSKGIEALFPIQAMTFDTILDGSDLVGRARTGQGK 63
Query: 396 TLAFGIPIMDKII----KFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTI 557
TLAF +PI++ +I + + K G GR P L L PTRELA QV +F Y A L +
Sbjct: 64 TLAFVLPILESLINGPNRGSRKTGYGRPPCVLVLLPTRELATQVYADFDVYGGAIGLTSC 123
Query: 558 CVNGGTP 578
C+ GG P
Sbjct: 124 CLYGGAP 130
[82][TOP]
>UniRef100_UPI0001861D32 hypothetical protein BRAFLDRAFT_164511 n=1 Tax=Branchiostoma
floridae RepID=UPI0001861D32
Length = 509
Score = 97.1 bits (240), Expect = 9e-19
Identities = 50/121 (41%), Positives = 74/121 (61%)
Frame = +3
Query: 216 EEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGK 395
E G+ E + + I+ + V+ L + + KLFP+Q + + G D+I +ARTGTGK
Sbjct: 2 ENGTITKEEGDFENFRITAQTVTKLKARNVVKLFPVQYSTFDFVYDGWDVITQARTGTGK 61
Query: 396 TLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
TLAF IP+++++ K RGR P+ + LAPTRELA QV ++F + L + CV GGT
Sbjct: 62 TLAFSIPLVERLQKDGVSIKRGRAPVVIVLAPTRELAIQVYEDFKSISTKLTSFCVYGGT 121
Query: 576 P 578
P
Sbjct: 122 P 122
[83][TOP]
>UniRef100_UPI00017F0455 PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1
Tax=Sus scrofa RepID=UPI00017F0455
Length = 784
Score = 97.1 bits (240), Expect = 9e-19
Identities = 49/105 (46%), Positives = 63/105 (60%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISEE + L +G++ LFPIQ G+D+I +ARTGTGKT +F IP+++K+
Sbjct: 194 ISEETIKLLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLQGEL 253
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTP 578
RGR P L LAPTRELA QV ++F D L C GGTP
Sbjct: 254 QDRKRGRAPQVLVLAPTRELASQVSRDFSDITKKLAVACFYGGTP 298
[84][TOP]
>UniRef100_UPI00005A06FA PREDICTED: similar to nucleolar protein GU2 isoform 5 n=1 Tax=Canis
lupus familiaris RepID=UPI00005A06FA
Length = 644
Score = 97.1 bits (240), Expect = 9e-19
Identities = 48/104 (46%), Positives = 64/104 (61%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISEE + L +G+S LFPIQ P +G+D+I +ARTGTGKT +F IP+++++ +
Sbjct: 145 ISEETIKLLKGRGVSYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQ 204
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
+ R P L LAPTRELA QV K+F D L C GGT
Sbjct: 205 ETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVACFYGGT 248
[85][TOP]
>UniRef100_UPI00004BFC83 PREDICTED: similar to nucleolar protein GU2 isoform 2 n=2 Tax=Canis
lupus familiaris RepID=UPI00004BFC83
Length = 738
Score = 97.1 bits (240), Expect = 9e-19
Identities = 48/104 (46%), Positives = 64/104 (61%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISEE + L +G+S LFPIQ P +G+D+I +ARTGTGKT +F IP+++++ +
Sbjct: 145 ISEETIKLLKGRGVSYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQ 204
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
+ R P L LAPTRELA QV K+F D L C GGT
Sbjct: 205 ETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVACFYGGT 248
[86][TOP]
>UniRef100_C3XZX1 Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma
floridae RepID=C3XZX1_BRAFL
Length = 655
Score = 97.1 bits (240), Expect = 9e-19
Identities = 50/121 (41%), Positives = 74/121 (61%)
Frame = +3
Query: 216 EEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGK 395
E G+ E + + I+ + V+ L + + KLFP+Q + + G D+I +ARTGTGK
Sbjct: 81 ENGTITKEEGDFENFRITAQTVTKLKARNVVKLFPVQYSTFDFVYDGWDVITQARTGTGK 140
Query: 396 TLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
TLAF IP+++++ K RGR P+ + LAPTRELA QV ++F + L + CV GGT
Sbjct: 141 TLAFSIPLVERLQKDGVSIKRGRAPVVIVLAPTRELAIQVYEDFKSISTKLTSFCVYGGT 200
Query: 576 P 578
P
Sbjct: 201 P 201
[87][TOP]
>UniRef100_UPI000021DD77 PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
isoform 2 n=1 Tax=Rattus norvegicus RepID=UPI000021DD77
Length = 734
Score = 96.3 bits (238), Expect = 2e-18
Identities = 47/104 (45%), Positives = 65/104 (62%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISEE + L +G++ LFPIQ P +G+D+I +ARTGTGKT +F IP+++++ +
Sbjct: 141 ISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQ 200
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
+ R P L LAPTRELA QV K+F D L+ C GGT
Sbjct: 201 ETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLNVACFYGGT 244
[88][TOP]
>UniRef100_C1FFV4 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FFV4_9CHLO
Length = 631
Score = 96.3 bits (238), Expect = 2e-18
Identities = 54/131 (41%), Positives = 78/131 (59%), Gaps = 10/131 (7%)
Frame = +3
Query: 216 EEGSKNDEGLE---IKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTG 386
+E S D ++ + +S+E+ + L KGI+ L+ IQ +P + G+D++GRARTG
Sbjct: 14 KEASDGDASVDENHVSNFNLSKEVCARLETKGITSLYSIQAQCFQPILDGKDLVGRARTG 73
Query: 387 TGKTLAFGIPIMDKIIKFN-----AKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPN 545
GKTLAF +PI++ I + N + +GR P+ LAPTRELAKQV +F A
Sbjct: 74 CGKTLAFVLPIVEVINRENPMPASGRRVQGRRPVVALLAPTRELAKQVHSDFQHIGQAFG 133
Query: 546 LDTICVNGGTP 578
L +ICV GG P
Sbjct: 134 LTSICVYGGAP 144
[89][TOP]
>UniRef100_UPI0001795959 PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 n=1 Tax=Equus
caballus RepID=UPI0001795959
Length = 738
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/104 (45%), Positives = 64/104 (61%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISEE + L +G++ LFPIQ P +G+D+I +ARTGTGKT +F IP+++++ +
Sbjct: 144 ISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQ 203
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
+ R P L LAPTRELA QV K+F D L C GGT
Sbjct: 204 ETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVACFYGGT 247
[90][TOP]
>UniRef100_UPI0001555D8F PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 n=1
Tax=Ornithorhynchus anatinus RepID=UPI0001555D8F
Length = 790
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/105 (44%), Positives = 63/105 (60%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISE+ + L +G++ LFPIQ +GRD++ +ARTGTGKT +F IP+ +K+ +
Sbjct: 189 ISEQTIRLLKDRGVTYLFPIQVKTFHHVYEGRDVVAQARTGTGKTFSFAIPLTEKLQRKR 248
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTP 578
+ RG P L L PTRELA QV K+F D L C GGTP
Sbjct: 249 EEQKRGYPPKVLVLTPTRELANQVAKDFKDITRTLTVACFYGGTP 293
[91][TOP]
>UniRef100_UPI00006D452E PREDICTED: similar to nucleolar protein GU2 n=1 Tax=Macaca mulatta
RepID=UPI00006D452E
Length = 737
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/104 (45%), Positives = 64/104 (61%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISEE + L +G++ LFPIQ P +G+D+I +ARTGTGKT +F IP+++++ +
Sbjct: 144 ISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQ 203
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
+ R P L LAPTRELA QV K+F D L C GGT
Sbjct: 204 ETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVACFYGGT 247
[92][TOP]
>UniRef100_UPI000036E757 PREDICTED: nucleolar protein GU2 n=1 Tax=Pan troglodytes
RepID=UPI000036E757
Length = 737
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/104 (45%), Positives = 64/104 (61%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISEE + L +G++ LFPIQ P +G+D+I +ARTGTGKT +F IP+++++ +
Sbjct: 144 ISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQ 203
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
+ R P L LAPTRELA QV K+F D L C GGT
Sbjct: 204 ETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVACFYGGT 247
[93][TOP]
>UniRef100_UPI0000612B85 PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 isoform 1 n=1
Tax=Bos taurus RepID=UPI0000612B85
Length = 737
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/104 (45%), Positives = 64/104 (61%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISEE + L +G++ LFPIQ P +G+D+I +ARTGTGKT +F IP+++++ +
Sbjct: 144 ISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQ 203
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
+ R P L LAPTRELA QV K+F D L C GGT
Sbjct: 204 ETIKKSRSPKVLVLAPTRELANQVAKDFKDVTRKLSVACFYGGT 247
[94][TOP]
>UniRef100_Q5BKP5 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 n=1 Tax=Mus musculus
RepID=Q5BKP5_MOUSE
Length = 734
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/104 (45%), Positives = 64/104 (61%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISEE + L +G++ LFPIQ P +G+D+I +ARTGTGKT +F IP+++++ +
Sbjct: 141 ISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQ 200
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
+ R P L LAPTRELA QV K+F D L C GGT
Sbjct: 201 ETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVACFYGGT 244
[95][TOP]
>UniRef100_C1XGK2 ATP-dependent RNA helicase DbpA n=1 Tax=Meiothermus ruber DSM 1279
RepID=C1XGK2_MEIRU
Length = 556
Score = 95.9 bits (237), Expect = 2e-18
Identities = 52/111 (46%), Positives = 70/111 (63%)
Frame = +3
Query: 243 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 422
+E + E+ A+ KG + PIQ A + A++G+D++G+ARTGTGKTLAFGIPI
Sbjct: 1 MEFSAFTLRPEVAQAIQAKGFTTATPIQAAAIPLALEGKDVLGQARTGTGKTLAFGIPIA 60
Query: 423 DKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
+++ +A RGR P AL L PTRELA QV KE AP+L + GGT
Sbjct: 61 NRL---DAARERGRAPRALILTPTRELALQVAKELEWLAPHLTITPIYGGT 108
[96][TOP]
>UniRef100_Q5R409 Putative uncharacterized protein DKFZp459C132 (Fragment) n=1
Tax=Pongo abelii RepID=Q5R409_PONAB
Length = 413
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/104 (45%), Positives = 64/104 (61%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISEE + L +G++ LFPIQ P +G+D+I +ARTGTGKT +F IP+++++ +
Sbjct: 144 ISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQ 203
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
+ R P L LAPTRELA QV K+F D L C GGT
Sbjct: 204 ETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVACFYGGT 247
[97][TOP]
>UniRef100_Q99MJ9 ATP-dependent RNA helicase DDX50 n=2 Tax=Mus musculus
RepID=DDX50_MOUSE
Length = 734
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/104 (45%), Positives = 64/104 (61%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISEE + L +G++ LFPIQ P +G+D+I +ARTGTGKT +F IP+++++ +
Sbjct: 141 ISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQ 200
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
+ R P L LAPTRELA QV K+F D L C GGT
Sbjct: 201 ETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVACFYGGT 244
[98][TOP]
>UniRef100_Q9BQ39 ATP-dependent RNA helicase DDX50 n=2 Tax=Homo sapiens
RepID=DDX50_HUMAN
Length = 737
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/104 (45%), Positives = 64/104 (61%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISEE + L +G++ LFPIQ P +G+D+I +ARTGTGKT +F IP+++++ +
Sbjct: 144 ISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQ 203
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
+ R P L LAPTRELA QV K+F D L C GGT
Sbjct: 204 ETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVACFYGGT 247
[99][TOP]
>UniRef100_UPI0000E80793 PREDICTED: similar to Gu protein n=1 Tax=Gallus gallus
RepID=UPI0000E80793
Length = 690
Score = 95.5 bits (236), Expect = 3e-18
Identities = 51/127 (40%), Positives = 70/127 (55%), Gaps = 6/127 (4%)
Frame = +3
Query: 216 EEGSKNDEGLEIKKLG------ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRA 377
E GS +E E + G +S ++ L +G+ LFP+Q +P G+D+I +A
Sbjct: 110 EPGSDAEELTEEAREGAFSNFPLSPSTINLLKARGVKYLFPVQVKTFQPIYDGKDLIAQA 169
Query: 378 RTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTI 557
RTGTGKT +F IP+ +K+ + RGR P L L PTRELA QV K+F + L
Sbjct: 170 RTGTGKTFSFAIPLTEKLQSVSQDEKRGRSPKVLVLVPTRELAIQVAKDFKNLTRKLSVA 229
Query: 558 CVNGGTP 578
C GGTP
Sbjct: 230 CFYGGTP 236
[100][TOP]
>UniRef100_UPI00017B33D3 UPI00017B33D3 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B33D3
Length = 605
Score = 95.5 bits (236), Expect = 3e-18
Identities = 56/142 (39%), Positives = 75/142 (52%), Gaps = 1/142 (0%)
Frame = +3
Query: 153 PLQFRASLPSLA-EFAVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQR 329
P Q + PS + E + +D E + IS +S L +G+S LF IQ
Sbjct: 1 PSQTPSQTPSQSSEESASDSEKETETPEQREGAFSNFRISPVTISKLQARGVSYLFDIQV 60
Query: 330 AVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAK 509
+P G D+I +ARTGTGKT +F IP+++K+ +A RGR P L L PTRELA
Sbjct: 61 KTFDPVYDGEDVIAQARTGTGKTFSFAIPLVEKLQGDSAAPARGRAPKVLVLTPTRELAI 120
Query: 510 QVEKEFYDSAPNLDTICVNGGT 575
QV K+F D L +C GGT
Sbjct: 121 QVAKDFKDIIKKLSIVCFYGGT 142
[101][TOP]
>UniRef100_B9R9L5 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus
communis RepID=B9R9L5_RICCO
Length = 690
Score = 95.1 bits (235), Expect = 3e-18
Identities = 55/124 (44%), Positives = 70/124 (56%), Gaps = 6/124 (4%)
Frame = +3
Query: 219 EGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKT 398
E ++ D I K ISE + L KGI LFPIQ + + G D++GRARTG GKT
Sbjct: 97 ETAEEDHPNAISKYRISESLREKLKSKGIQSLFPIQAMTFDDILDGSDLVGRARTGQGKT 156
Query: 399 LAFGIPIMDKIIKFNAKHGR----GRDPLALALAPTRELAKQVEKEF--YDSAPNLDTIC 560
LAF +PI++ I +AK R GR P L L PTRELA QV +F Y + L + C
Sbjct: 157 LAFVLPILESITNGHAKESRKTGYGRPPSVLVLLPTRELASQVFDDFKVYGESLGLTSCC 216
Query: 561 VNGG 572
+ GG
Sbjct: 217 LYGG 220
[102][TOP]
>UniRef100_UPI000194C8EB PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1
Tax=Taeniopygia guttata RepID=UPI000194C8EB
Length = 589
Score = 94.7 bits (234), Expect = 5e-18
Identities = 50/131 (38%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Frame = +3
Query: 192 FAVADFPYEEGSKNDEGLE--IKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDM 365
F+++D E +E E +S+ V L +GI LFP+Q +P G+D+
Sbjct: 3 FSLSDGSTFEEELTEEAKEGAFSNFPLSQNTVKLLTARGIKYLFPVQVKTFQPIYDGKDV 62
Query: 366 IGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPN 545
I +ARTGTGKT +F +P+++K+ RGR P L L PTRELA QV K+F +
Sbjct: 63 IAQARTGTGKTFSFALPLIEKLQSVTQDGRRGRAPKVLVLVPTRELATQVAKDFKNLTKK 122
Query: 546 LDTICVNGGTP 578
L C GG+P
Sbjct: 123 LSVACFYGGSP 133
[103][TOP]
>UniRef100_UPI00005A07BE PREDICTED: similar to Nucleolar RNA helicase II (Nucleolar RNA
helicase Gu) (RH II/Gu) (DEAD-box protein 21) n=1
Tax=Canis lupus familiaris RepID=UPI00005A07BE
Length = 784
Score = 94.4 bits (233), Expect = 6e-18
Identities = 54/133 (40%), Positives = 72/133 (54%)
Frame = +3
Query: 180 SLAEFAVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGR 359
+L E + ++ E + EG ISEE + L +G++ LFPIQ G+
Sbjct: 167 TLGEESSSELEQEIPVEQKEGA-FSNFPISEETIKLLKARGVTFLFPIQAKTFYHVYSGK 225
Query: 360 DMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSA 539
D+I +ARTGTGKT +F IP++ K+ RGR P L LAPTRELA QV ++F D
Sbjct: 226 DLIAQARTGTGKTFSFAIPLIVKLQGELQDRKRGRAPQVLVLAPTRELANQVSRDFSDIT 285
Query: 540 PNLDTICVNGGTP 578
L C GGTP
Sbjct: 286 RKLAVACFYGGTP 298
[104][TOP]
>UniRef100_UPI00004BFC84 Nucleolar RNA helicase 2 (EC 3.6.1.-) (Nucleolar RNA helicase II)
(Nucleolar RNA helicase Gu) (RH II/Gu) (Gu-alpha) (DEAD
box protein 21). n=1 Tax=Canis lupus familiaris
RepID=UPI00004BFC84
Length = 785
Score = 94.4 bits (233), Expect = 6e-18
Identities = 54/133 (40%), Positives = 72/133 (54%)
Frame = +3
Query: 180 SLAEFAVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGR 359
+L E + ++ E + EG ISEE + L +G++ LFPIQ G+
Sbjct: 168 TLGEESSSELEQEIPVEQKEGA-FSNFPISEETIKLLKARGVTFLFPIQAKTFYHVYSGK 226
Query: 360 DMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSA 539
D+I +ARTGTGKT +F IP++ K+ RGR P L LAPTRELA QV ++F D
Sbjct: 227 DLIAQARTGTGKTFSFAIPLIVKLQGELQDRKRGRAPQVLVLAPTRELANQVSRDFSDIT 286
Query: 540 PNLDTICVNGGTP 578
L C GGTP
Sbjct: 287 RKLAVACFYGGTP 299
[105][TOP]
>UniRef100_B5RIC3 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 (Fragment) n=1 Tax=Salmo
salar RepID=B5RIC3_SALSA
Length = 611
Score = 94.4 bits (233), Expect = 6e-18
Identities = 50/104 (48%), Positives = 62/104 (59%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
IS + L +GIS LF IQ +G+D+IG+ARTGTGKTLAF IP+++K+
Sbjct: 40 ISPNTIKLLQARGISYLFDIQTQTFNSVYEGKDVIGQARTGTGKTLAFAIPLIEKLQNDP 99
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
RGR P L LAPTRELA QV K+F D L C GG+
Sbjct: 100 DDKRRGRAPKILCLAPTRELAIQVSKDFKDMTKKLSVTCFYGGS 143
[106][TOP]
>UniRef100_Q01AV7 Putative RNA helicase (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q01AV7_OSTTA
Length = 693
Score = 94.4 bits (233), Expect = 6e-18
Identities = 51/113 (45%), Positives = 72/113 (63%), Gaps = 7/113 (6%)
Frame = +3
Query: 261 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKF 440
G+++ + + L KKG LF IQ LE A+ GRD++GRARTG GKTLAF +PI++ + K
Sbjct: 87 GLTDPVKTTLRKKGYDALFQIQAETLEIALGGRDVVGRARTGCGKTLAFVLPIIELMAKM 146
Query: 441 -----NAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVNGGTP 578
N + +GR P+ + LAPTRELAKQV +F ++ ++CV GG P
Sbjct: 147 SPMPANGRRVQGRRPMCVVLAPTRELAKQVFADFDWIGNSYGFKSLCVYGGAP 199
[107][TOP]
>UniRef100_B4FF50 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FF50_MAIZE
Length = 506
Score = 94.4 bits (233), Expect = 6e-18
Identities = 51/111 (45%), Positives = 67/111 (60%), Gaps = 6/111 (5%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKII--- 434
ISE + +L KGI LFPIQ + + G D++GRARTG GKTLAF +PI++ ++
Sbjct: 128 ISESLRQSLRSKGIKSLFPIQATTFDLVLDGSDLVGRARTGQGKTLAFVLPILESLVNGA 187
Query: 435 -KFNAKHGRGRDPLALALAPTRELAKQV--EKEFYDSAPNLDTICVNGGTP 578
K + + GR P L L PTRELA QV + EFY + L CV GG+P
Sbjct: 188 NKASRRTEHGRTPSVLVLLPTRELANQVHADFEFYGATFGLSACCVYGGSP 238
[108][TOP]
>UniRef100_B0RFN7 Putative ATP-dependent helicase n=1 Tax=Clavibacter michiganensis
subsp. sepedonicus RepID=B0RFN7_CLAMS
Length = 761
Score = 93.6 bits (231), Expect = 1e-17
Identities = 50/122 (40%), Positives = 76/122 (62%), Gaps = 4/122 (3%)
Frame = +3
Query: 225 SKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLA 404
+K+ +G+ LG+ + IV L + G S FPIQ A + + GRD++GR RTG+GKT+A
Sbjct: 370 AKDVDGVTFAALGLGQNIVRVLEELGASSPFPIQAATIPDVLAGRDVLGRGRTGSGKTIA 429
Query: 405 FGIPIMDKIIKFNAKHGR--GRDPLALALAPTRELAKQVEKEFYDSAPN--LDTICVNGG 572
FG P+++++++ + R GR P AL LAPTRELA Q+++ A + L T + GG
Sbjct: 430 FGAPLVERLLENDGAKNRKMGRKPRALILAPTRELAMQIDRTVQPIARSVGLFTTTIFGG 489
Query: 573 TP 578
P
Sbjct: 490 VP 491
[109][TOP]
>UniRef100_UPI0001555D90 PREDICTED: hypothetical protein n=1 Tax=Ornithorhynchus anatinus
RepID=UPI0001555D90
Length = 757
Score = 93.2 bits (230), Expect = 1e-17
Identities = 52/135 (38%), Positives = 71/135 (52%)
Frame = +3
Query: 171 SLPSLAEFAVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAM 350
S P E AD P + + + IS+E + L +G++ LFPIQ
Sbjct: 148 SSPVSQEPKAADEPQQHLTAEQKEGAFSNFSISKETIQLLKARGVTYLFPIQAKTFGHVS 207
Query: 351 QGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFY 530
G+D+I +ARTGTGKT +F IP+++K+ + RGR P L L PTRELA QV ++F
Sbjct: 208 SGKDVIAQARTGTGKTFSFAIPLIEKLQRDLKDQKRGRLPKVLVLTPTRELAIQVGRDFS 267
Query: 531 DSAPNLDTICVNGGT 575
D L C GGT
Sbjct: 268 DITKKLTVACFYGGT 282
[110][TOP]
>UniRef100_Q9DF35 RNA helicase II/Gu n=1 Tax=Xenopus laevis RepID=Q9DF35_XENLA
Length = 759
Score = 93.2 bits (230), Expect = 1e-17
Identities = 50/123 (40%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Frame = +3
Query: 216 EEGSKNDEGLE--IKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGT 389
EE N E ++ K +S+E + L KG+S LFPIQ A G+D++ +ARTGT
Sbjct: 168 EEQDINQEKIDGDFSKFPLSKETIKNLQAKGVSYLFPIQSKTFHTAYSGKDVVVQARTGT 227
Query: 390 GKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNG 569
GKT +F IP+++K+ + RGR P + L PTRELA Q+ E L C G
Sbjct: 228 GKTFSFAIPLVEKLNEDQQPLARGRAPRVIILTPTRELAIQITNEIRSITKKLKVSCFYG 287
Query: 570 GTP 578
GTP
Sbjct: 288 GTP 290
[111][TOP]
>UniRef100_Q6GP16 LOC398189 protein n=1 Tax=Xenopus laevis RepID=Q6GP16_XENLA
Length = 727
Score = 93.2 bits (230), Expect = 1e-17
Identities = 50/123 (40%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Frame = +3
Query: 216 EEGSKNDEGLE--IKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGT 389
EE N E ++ K +S+E + L KG+S LFPIQ A G+D++ +ARTGT
Sbjct: 136 EEQEINQEKIDGDFSKFPLSKETIKNLQAKGVSYLFPIQSKTFHTAYSGKDVVVQARTGT 195
Query: 390 GKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNG 569
GKT +F IP+++K+ + RGR P + L PTRELA Q+ E L C G
Sbjct: 196 GKTFSFAIPLVEKLNEDQQPLARGRAPRVIILTPTRELAIQITNEIRSITKKLKVSCFYG 255
Query: 570 GTP 578
GTP
Sbjct: 256 GTP 258
[112][TOP]
>UniRef100_C5X615 Putative uncharacterized protein Sb02g030210 n=1 Tax=Sorghum
bicolor RepID=C5X615_SORBI
Length = 711
Score = 93.2 bits (230), Expect = 1e-17
Identities = 50/111 (45%), Positives = 67/111 (60%), Gaps = 6/111 (5%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKII--- 434
ISE + +L KGI LFPIQ + + G D++GRARTG GKTLAF +PI++ ++
Sbjct: 129 ISEPLRQSLRSKGIKALFPIQATTFDLVLDGNDLVGRARTGQGKTLAFVLPILESLVNGA 188
Query: 435 -KFNAKHGRGRDPLALALAPTRELAKQV--EKEFYDSAPNLDTICVNGGTP 578
K + + GR P + L PTRELA QV + EFY + L CV GG+P
Sbjct: 189 HKASRRTEHGRTPSVIVLLPTRELANQVHADFEFYGATFGLSACCVYGGSP 239
[113][TOP]
>UniRef100_A6MCY9 DEAD/DEAH box helicase family protein n=1 Tax=Oryza brachyantha
RepID=A6MCY9_9ORYZ
Length = 688
Score = 93.2 bits (230), Expect = 1e-17
Identities = 53/111 (47%), Positives = 67/111 (60%), Gaps = 7/111 (6%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISE + L KGI LFPIQ + + G D++GRARTG GKTLAF +PI++ ++ N
Sbjct: 113 ISEPLREKLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLPILESLV--N 170
Query: 444 AKH-----GRGRDPLALALAPTRELAKQV--EKEFYDSAPNLDTICVNGGT 575
KH GR P L L PTRELAKQV + EFY + L + CV GG+
Sbjct: 171 GKHKASGADYGRPPSVLVLLPTRELAKQVHTDFEFYGATFGLSSCCVYGGS 221
[114][TOP]
>UniRef100_A2Z376 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2Z376_ORYSI
Length = 685
Score = 93.2 bits (230), Expect = 1e-17
Identities = 63/163 (38%), Positives = 80/163 (49%), Gaps = 20/163 (12%)
Frame = +3
Query: 147 PVPLQFRASLPSLAEFAVADFPYEEGSKNDEGLEIKKLG--------------ISEEIVS 284
P P +A E V + EE +DEG E+ G ISE +
Sbjct: 62 PAPAAKKAKKEKTKEKVVVE---EEDDDDDEG-ELTASGDEDPADPNALANFRISEPLRE 117
Query: 285 ALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGR-- 458
L KGI LFPIQ + + G D++GRARTG GKTLAF +PI++ ++ K R
Sbjct: 118 KLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLPILESLVNGTHKASRRT 177
Query: 459 --GRDPLALALAPTRELAKQVEKE--FYDSAPNLDTICVNGGT 575
GR P L L PTRELAKQV + FY + L CV GG+
Sbjct: 178 DYGRPPTVLVLLPTRELAKQVHTDFAFYGATFGLSACCVYGGS 220
[115][TOP]
>UniRef100_Q53FI9 Nucleolar protein GU2 variant (Fragment) n=1 Tax=Homo sapiens
RepID=Q53FI9_HUMAN
Length = 363
Score = 93.2 bits (230), Expect = 1e-17
Identities = 46/104 (44%), Positives = 63/104 (60%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISEE + L +G++ LFPIQ P +G+D+I +ARTGTGKT +F IP+++++ +
Sbjct: 144 ISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQ 203
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
+ R P L LAPT ELA QV K+F D L C GGT
Sbjct: 204 ETIKKSRSPKVLVLAPTGELANQVAKDFKDITRKLSVACFYGGT 247
[116][TOP]
>UniRef100_Q650T9 DEAD-box ATP-dependent RNA helicase 7 n=2 Tax=Oryza sativa Japonica
Group RepID=RH7_ORYSJ
Length = 696
Score = 93.2 bits (230), Expect = 1e-17
Identities = 63/163 (38%), Positives = 80/163 (49%), Gaps = 20/163 (12%)
Frame = +3
Query: 147 PVPLQFRASLPSLAEFAVADFPYEEGSKNDEGLEIKKLG--------------ISEEIVS 284
P P +A E V + EE +DEG E+ G ISE +
Sbjct: 73 PAPAAKKAKKEKTKEKVVVE---EEEEDDDEG-ELTASGDEDPADPNALANFRISESLRE 128
Query: 285 ALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGR-- 458
L KGI LFPIQ + + G D++GRARTG GKTLAF +PI++ ++ K R
Sbjct: 129 KLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLPILESLVNGTHKASRRT 188
Query: 459 --GRDPLALALAPTRELAKQVEKE--FYDSAPNLDTICVNGGT 575
GR P L L PTRELAKQV + FY + L CV GG+
Sbjct: 189 DYGRPPTVLVLLPTRELAKQVHTDFAFYGATFGLSACCVYGGS 231
[117][TOP]
>UniRef100_UPI00016E0718 UPI00016E0718 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E0718
Length = 603
Score = 92.4 bits (228), Expect = 2e-17
Identities = 51/120 (42%), Positives = 68/120 (56%)
Frame = +3
Query: 216 EEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGK 395
EE + EG IS ++ L +G+S LF IQ + G D+I +ARTGTGK
Sbjct: 19 EETPEQREGA-FSNFRISPVTINKLKARGVSYLFDIQVKTFDSVYDGEDVIAQARTGTGK 77
Query: 396 TLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
T +F IP+++K+ + +A RGR P L L PTRELA QV K+F D L +C GGT
Sbjct: 78 TFSFAIPLVEKLQRDSAGPARGRAPKVLVLTPTRELAIQVAKDFKDIIKKLSIVCFYGGT 137
[118][TOP]
>UniRef100_A5CP09 Putative ATP-dependent RNA helicase n=1 Tax=Clavibacter
michiganensis subsp. michiganensis NCPPB 382
RepID=A5CP09_CLAM3
Length = 403
Score = 92.4 bits (228), Expect = 2e-17
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 4/122 (3%)
Frame = +3
Query: 225 SKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLA 404
+K+ +G+ LG+ + IV L + G + FPIQ A + + GRD++GR RTG+GKT+A
Sbjct: 12 AKDVDGVTFAALGLGQNIVRVLEELGAASPFPIQAATIPDVLAGRDVLGRGRTGSGKTIA 71
Query: 405 FGIPIMDKIIKFNAKHGR--GRDPLALALAPTRELAKQVEKEFYDSAPN--LDTICVNGG 572
FG P+++++++ + R GR P AL LAPTRELA Q+++ A + L T + GG
Sbjct: 72 FGAPLVERLLENDGAKNRKMGRKPRALILAPTRELAMQIDRTVQPIARSVGLFTTTIFGG 131
Query: 573 TP 578
P
Sbjct: 132 VP 133
[119][TOP]
>UniRef100_UPI000069FD43 UPI000069FD43 related cluster n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI000069FD43
Length = 758
Score = 92.0 bits (227), Expect = 3e-17
Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Frame = +3
Query: 216 EEGSKNDEGLE--IKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGT 389
EE N E ++ K IS++ + L KG+S LFPIQ A G+D++ +ARTGT
Sbjct: 168 EEEEINQEKIDGDFSKFPISKDTIKNLQAKGVSYLFPIQSKTFHTAYSGKDVVVQARTGT 227
Query: 390 GKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNG 569
GKT +F IP+++++ + RGR P + L PTRELA Q+ E L C G
Sbjct: 228 GKTFSFAIPLVERLNEDQQPLARGRAPRVIILTPTRELAIQITNEIRSITKKLKVCCFYG 287
Query: 570 GTP 578
GTP
Sbjct: 288 GTP 290
[120][TOP]
>UniRef100_Q6AX07 LOC398188 protein (Fragment) n=1 Tax=Xenopus laevis
RepID=Q6AX07_XENLA
Length = 397
Score = 92.0 bits (227), Expect = 3e-17
Identities = 47/121 (38%), Positives = 66/121 (54%)
Frame = +3
Query: 216 EEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGK 395
EE K + K IS++ + L KG++ LFPIQ G+D++ +ARTGTGK
Sbjct: 178 EEIKKEKIDGDFSKFPISKDTIKNLQAKGVTYLFPIQSKTFHTVYSGKDVVVQARTGTGK 237
Query: 396 TLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
T +FGIP+++++ + RGR P + L PTRELA Q+ E L C GGT
Sbjct: 238 TFSFGIPLVERLSEDQQPLARGRAPRVIILTPTRELAIQITNELRSMTKKLKVACFYGGT 297
Query: 576 P 578
P
Sbjct: 298 P 298
[121][TOP]
>UniRef100_Q32NW4 LOC398188 protein n=1 Tax=Xenopus laevis RepID=Q32NW4_XENLA
Length = 768
Score = 92.0 bits (227), Expect = 3e-17
Identities = 47/121 (38%), Positives = 66/121 (54%)
Frame = +3
Query: 216 EEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGK 395
EE K + K IS++ + L KG++ LFPIQ G+D++ +ARTGTGK
Sbjct: 180 EEIKKEKIDGDFSKFPISKDTIKNLQAKGVTYLFPIQSKTFHTVYSGKDVVVQARTGTGK 239
Query: 396 TLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
T +FGIP+++++ + RGR P + L PTRELA Q+ E L C GGT
Sbjct: 240 TFSFGIPLVERLSEDQQPLARGRAPRVIILTPTRELAIQITNELRSMTKKLKVACFYGGT 299
Query: 576 P 578
P
Sbjct: 300 P 300
[122][TOP]
>UniRef100_Q28BT0 Novel GUCT (NUC152) domain containing DEAD/DEAH box helicase n=1
Tax=Xenopus (Silurana) tropicalis RepID=Q28BT0_XENTR
Length = 755
Score = 92.0 bits (227), Expect = 3e-17
Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Frame = +3
Query: 216 EEGSKNDEGLE--IKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGT 389
EE N E ++ K IS++ + L KG+S LFPIQ A G+D++ +ARTGT
Sbjct: 168 EEEEINQEKIDGDFSKFPISKDTIKNLQAKGVSYLFPIQSKTFHTAYSGKDVVVQARTGT 227
Query: 390 GKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNG 569
GKT +F IP+++++ + RGR P + L PTRELA Q+ E L C G
Sbjct: 228 GKTFSFAIPLVERLNEDQQPLARGRAPRVIILTPTRELAIQITNEIRSITKKLKVCCFYG 287
Query: 570 GTP 578
GTP
Sbjct: 288 GTP 290
[123][TOP]
>UniRef100_B1H1J4 Ddx21 protein n=1 Tax=Danio rerio RepID=B1H1J4_DANRE
Length = 759
Score = 92.0 bits (227), Expect = 3e-17
Identities = 46/104 (44%), Positives = 62/104 (59%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
IS + L +G+S LF IQ G+D+IG+ARTGTGKT +F +P+++K+ +
Sbjct: 173 ISPNTIKLLQARGVSYLFDIQVKTFNAVYDGKDLIGQARTGTGKTFSFAVPLVEKLQSGD 232
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
+ RGR P L LAPTRELA QV K+F D L C GG+
Sbjct: 233 QERRRGRPPKVLVLAPTRELAIQVTKDFKDITRKLSVTCFYGGS 276
[124][TOP]
>UniRef100_A9UMQ9 LOC734085 protein n=1 Tax=Xenopus (Silurana) tropicalis
RepID=A9UMQ9_XENTR
Length = 758
Score = 92.0 bits (227), Expect = 3e-17
Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Frame = +3
Query: 216 EEGSKNDEGLE--IKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGT 389
EE N E ++ K IS++ + L KG+S LFPIQ A G+D++ +ARTGT
Sbjct: 168 EEEEINQEKIDGDFSKFPISKDTIKNLQAKGVSYLFPIQSKTFHTAYSGKDVVVQARTGT 227
Query: 390 GKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNG 569
GKT +F IP+++++ + RGR P + L PTRELA Q+ E L C G
Sbjct: 228 GKTFSFAIPLVERLNEDQQPLARGRAPRVIILTPTRELAIQITNEIRSITKKLKVCCFYG 287
Query: 570 GTP 578
GTP
Sbjct: 288 GTP 290
[125][TOP]
>UniRef100_A1R913 Putative ATP-dependent RNA helicase n=1 Tax=Arthrobacter aurescens
TC1 RepID=A1R913_ARTAT
Length = 726
Score = 92.0 bits (227), Expect = 3e-17
Identities = 55/162 (33%), Positives = 87/162 (53%)
Frame = +3
Query: 78 ASTVTGELRQLPVVARARHFHSNPVPLQFRASLPSLAEFAVADFPYEEGSKNDEGLEIKK 257
A+T + ++ + A A + P++ A+ + F A P E + +EG+
Sbjct: 17 ATTESADVAETSAPAEAEAPAAAAAPVETVAAETAAPAFTEAPAPKVE-EEEEEGVRFVD 75
Query: 258 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIK 437
LGI +++AL G K PIQ A + ++GRD++G A+TGTGKT AF +P + ++ +
Sbjct: 76 LGIDGRVLAALQDVGYEKPSPIQAATIPLLLEGRDVVGLAQTGTGKTAAFAVPALSRLAE 135
Query: 438 FNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICV 563
+ +G R AL LAPTRELA QV + F A ++D V
Sbjct: 136 LHDLNGPSRKTQALVLAPTRELALQVAEAFTSYAKHIDDFTV 177
[126][TOP]
>UniRef100_C7QBM5 DEAD/DEAH box helicase domain protein n=1 Tax=Catenulispora
acidiphila DSM 44928 RepID=C7QBM5_CATAD
Length = 854
Score = 92.0 bits (227), Expect = 3e-17
Identities = 54/128 (42%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
Frame = +3
Query: 204 DFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRART 383
DF E ++ D + +LG+ EE+V LA+ G+ FPIQ A + A+ GR ++G+ART
Sbjct: 53 DFDDTESAEGDP-VAFTELGLPEELVKKLAENGVHNTFPIQAATIPDALAGRHVLGKART 111
Query: 384 GTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTI 557
G+GKTLAFG+ + + K R PLAL L PTRELA QV Y A D
Sbjct: 112 GSGKTLAFGLAALANL---KGKRARKGKPLALVLVPTRELAMQVSDALTPYGFAVGADIA 168
Query: 558 CVNGGTPI 581
V GG P+
Sbjct: 169 AVYGGAPM 176
[127][TOP]
>UniRef100_UPI00016E06FD UPI00016E06FD related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E06FD
Length = 680
Score = 91.7 bits (226), Expect = 4e-17
Identities = 47/104 (45%), Positives = 63/104 (60%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
IS ++ L +G+S LF IQ + G D+I +ARTGTGKT +F IP+++K+ + +
Sbjct: 110 ISPVTINKLKARGVSYLFDIQVKTFDSVYDGEDVIAQARTGTGKTFSFAIPLVEKLQRDS 169
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
A RGR P L L PTRELA QV K+F D L +C GGT
Sbjct: 170 AGPARGRAPKVLVLTPTRELAIQVAKDFKDIIKKLSIVCFYGGT 213
[128][TOP]
>UniRef100_B4DW97 cDNA FLJ61430, highly similar to ATP-dependent RNA helicase DDX50
(EC 3.6.1.-) n=1 Tax=Homo sapiens RepID=B4DW97_HUMAN
Length = 711
Score = 91.7 bits (226), Expect = 4e-17
Identities = 46/104 (44%), Positives = 63/104 (60%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
ISEE + L +G++ LFPIQ P +G+D+I +ARTGTGKT +F IP+++++ +
Sbjct: 144 ISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQ 203
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
+ R P L LAPTRELA QV K+F D L GGT
Sbjct: 204 ETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVAWFYGGT 247
[129][TOP]
>UniRef100_Q39189 DEAD-box ATP-dependent RNA helicase 7 n=1 Tax=Arabidopsis thaliana
RepID=RH7_ARATH
Length = 671
Score = 91.7 bits (226), Expect = 4e-17
Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Frame = +3
Query: 249 IKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDK 428
+ K IS + L GI LFPIQ + + + G D++GRARTG GKTLAF +PI++
Sbjct: 98 VSKFRISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILES 157
Query: 429 II----KFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVNGG 572
++ K K G GR P L L PTRELAKQV +F Y + L + C+ GG
Sbjct: 158 LVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYGG 211
[130][TOP]
>UniRef100_A8M1E9 DEAD/DEAH box helicase domain protein n=1 Tax=Salinispora arenicola
CNS-205 RepID=A8M1E9_SALAI
Length = 574
Score = 91.3 bits (225), Expect = 5e-17
Identities = 52/126 (41%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = +3
Query: 210 PYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGT 389
P E S +DE LG+ +E+++ALA G + PIQR + P + GRD++G+A TGT
Sbjct: 5 PSAEPSTDDEATAFVDLGLRDELLAALAALGYEEPTPIQREAIPPLLAGRDLLGQAATGT 64
Query: 390 GKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDT--ICV 563
GKT AF +P++ ++ + G DP+AL L PTRELA QV + F+ L T + +
Sbjct: 65 GKTAAFALPLLQRM---SVDRPTG-DPVALVLVPTRELAVQVSEAFHRYGKELGTRVLPI 120
Query: 564 NGGTPI 581
GG PI
Sbjct: 121 YGGQPI 126
[131][TOP]
>UniRef100_UPI0001A2CB14 Nucleolar RNA helicase 2 (EC 3.6.1.-) (Nucleolar RNA helicase II)
(Nucleolar RNA helicase Gu) (RH II/Gu) (Gu-alpha) (DEAD
box protein 21). n=1 Tax=Danio rerio RepID=UPI0001A2CB14
Length = 510
Score = 90.9 bits (224), Expect = 7e-17
Identities = 46/111 (41%), Positives = 64/111 (57%)
Frame = +3
Query: 243 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 422
L K + V ++ +G+S LF IQ G+D+IG+ARTGTGKT +F +P++
Sbjct: 166 LNFKNFLVPPPRVVGMSSRGVSYLFDIQVKTFNAVYDGKDLIGQARTGTGKTFSFAVPLV 225
Query: 423 DKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
+K+ + + RGR P L LAPTRELA QV K+F D L C GG+
Sbjct: 226 EKLQSGDQERRRGRPPKVLVLAPTRELAIQVTKDFKDITRKLSVTCFYGGS 276
[132][TOP]
>UniRef100_C2AS76 ATP-dependent RNA helicase CsdA n=1 Tax=Tsukamurella paurometabola
DSM 20162 RepID=C2AS76_TSUPA
Length = 602
Score = 90.9 bits (224), Expect = 7e-17
Identities = 51/122 (41%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Frame = +3
Query: 216 EEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGK 395
E+ +E + LGI E ++ ALA+ G PIQ A + P + G D++G A+TGTGK
Sbjct: 19 EQAGNENEPVTFLDLGIDERVLRALAEVGYENPSPIQAATIPPLLAGNDVVGLAQTGTGK 78
Query: 396 TLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSA---PNLDTICVN 566
T AF +P++ KI G R P AL LAPTRELA QV + F A PN+ + +
Sbjct: 79 TAAFAVPVLSKI------DGESRTPQALVLAPTRELALQVSEAFGKYAVHMPNITVLPIY 132
Query: 567 GG 572
GG
Sbjct: 133 GG 134
[133][TOP]
>UniRef100_C6WM51 DEAD/DEAH box helicase domain protein n=1 Tax=Actinosynnema mirum
DSM 43827 RepID=C6WM51_ACTMD
Length = 609
Score = 90.5 bits (223), Expect = 8e-17
Identities = 60/151 (39%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Frame = +3
Query: 138 HSNPVPLQF-RASLPSLAEFAVADFPYEEGSK-NDEGLEIKKLGISEEIVSALAKKGISK 311
H +PV L+ A LP + P E + E +LG+ EEIV AL + GI +
Sbjct: 19 HVDPVELEHSEAGLPETDDSR----PLEANAPVQPEAPTFTELGVREEIVRALGEAGIER 74
Query: 312 LFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAP 491
F IQ L A+ G D+IG+ARTGTGKTL FGIP++ ++I G G P AL + P
Sbjct: 75 AFAIQELTLPLALAGEDVIGQARTGTGKTLGFGIPLLQRVI----TPGDG-TPQALVVVP 129
Query: 492 TRELAKQVEKEFYDSAPNLD--TICVNGGTP 578
TREL QV + D++ ++D + + GG P
Sbjct: 130 TRELCLQVTHDLTDASKHMDVRVLAIYGGRP 160
[134][TOP]
>UniRef100_UPI0001AEE82A ATP-dependent RNA helicase n=1 Tax=Streptomyces albus J1074
RepID=UPI0001AEE82A
Length = 789
Score = 90.1 bits (222), Expect = 1e-16
Identities = 55/145 (37%), Positives = 76/145 (52%), Gaps = 9/145 (6%)
Frame = +3
Query: 168 ASLPSLAEFAVADFPY-------EEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQ 326
A LP E A AD +E D+G+ LG+ E +V LA+ G++K FPIQ
Sbjct: 40 AELPEADEAAQADVAELDAEAADDEAETEDDGVTFASLGLPEGVVRKLAQNGVTKPFPIQ 99
Query: 327 RAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELA 506
A + A+ G+D++GR RTG+GKTL+FG+P++ + H + P + L PTRELA
Sbjct: 100 AATIPDALAGKDILGRGRTGSGKTLSFGLPLLASLA---GGHTEKKKPRGVILTPTRELA 156
Query: 507 KQVEKEF--YDSAPNLDTICVNGGT 575
QV Y L V GGT
Sbjct: 157 MQVADALQPYGDVLGLRMKVVCGGT 181
[135][TOP]
>UniRef100_Q9DF36 RNA helicase II/Gu n=1 Tax=Xenopus laevis RepID=Q9DF36_XENLA
Length = 800
Score = 90.1 bits (222), Expect = 1e-16
Identities = 46/121 (38%), Positives = 65/121 (53%)
Frame = +3
Query: 216 EEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGK 395
EE K + K IS++ + KG++ LFPIQ G+D++ +ARTGTGK
Sbjct: 212 EEIKKEKIDGDFSKFPISKDTIKNXQAKGVTYLFPIQSKTFHTVYSGKDVVVQARTGTGK 271
Query: 396 TLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
T +FGIP+++++ + RGR P + L PTRELA Q+ E L C GGT
Sbjct: 272 TFSFGIPLVERLSEDQQPLARGRAPRVIILTPTRELAIQITNELRSMTKKLKVACFYGGT 331
Query: 576 P 578
P
Sbjct: 332 P 332
[136][TOP]
>UniRef100_B6KA36 Nucleolar RNA helicase, putative n=2 Tax=Toxoplasma gondii
RepID=B6KA36_TOXGO
Length = 840
Score = 90.1 bits (222), Expect = 1e-16
Identities = 46/118 (38%), Positives = 75/118 (63%), Gaps = 2/118 (1%)
Frame = +3
Query: 231 NDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFG 410
+D GL + +S+ + +L K+GI++L P+Q+A GRD +GRARTGTGKT+AF
Sbjct: 112 SDSGL-LSDYNLSKTSLKSLQKRGITRLLPVQQAAYRHVFAGRDFVGRARTGTGKTIAFA 170
Query: 411 IPIMDKIIKFNAKHGRGRD-PLALALAPTRELAKQVEKEFYD-SAPNLDTICVNGGTP 578
+P+++++ + G ++ P + L PTRELA+QV++EF L ++C+ GG P
Sbjct: 171 LPLVERVCASLPQPGNSKEKPRIVTLLPTRELAQQVQEEFETLLGGRLASVCLYGGAP 228
[137][TOP]
>UniRef100_Q6ACK0 ATP-dependent RNA helicase n=1 Tax=Leifsonia xyli subsp. xyli
RepID=Q6ACK0_LEIXX
Length = 399
Score = 89.4 bits (220), Expect = 2e-16
Identities = 51/123 (41%), Positives = 74/123 (60%), Gaps = 9/123 (7%)
Frame = +3
Query: 237 EGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP 416
+G+ LG+ IV ALA+ G FPIQ A + GRD++GR RTG+GKT+AFG P
Sbjct: 2 DGVTFADLGLGGNIVRALAELGAETPFPIQAATAPEIVAGRDVLGRGRTGSGKTIAFGAP 61
Query: 417 IMDKIIKFNAKHGR-------GRDPLALALAPTRELAKQVEKEFYDSAPN--LDTICVNG 569
+++++++ A+ G+ GR P AL LAPTRELA Q+++ A + L T + G
Sbjct: 62 MVERLMRLWAESGKSGGKRQTGRAPRALILAPTRELALQIDRTVQPIARSVGLFTTQIYG 121
Query: 570 GTP 578
G P
Sbjct: 122 GVP 124
[138][TOP]
>UniRef100_A0JZF7 DEAD/DEAH box helicase domain protein n=1 Tax=Arthrobacter sp. FB24
RepID=A0JZF7_ARTS2
Length = 747
Score = 89.4 bits (220), Expect = 2e-16
Identities = 57/167 (34%), Positives = 82/167 (49%), Gaps = 16/167 (9%)
Frame = +3
Query: 111 PVVARARHFHSNPVPLQFRASLPS-LAEFAVADFPYEEGSKND---------------EG 242
PV A F P P + A+ AE + + P E K + EG
Sbjct: 30 PVAGSAPVFTEAPAPAEAPAAEERPAAEASATEAPKTEAPKTEAPKADPTSGEADTEAEG 89
Query: 243 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 422
+ LGI +++AL G K PIQ A + ++GRD++G A+TGTGKT AF +P +
Sbjct: 90 IRFADLGIDGRVLAALQDVGYEKPSPIQAATIPLLLEGRDVVGLAQTGTGKTAAFAVPAL 149
Query: 423 DKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICV 563
++ + + +G R AL LAPTRELA QV + F A ++D V
Sbjct: 150 SRLAELHDLNGPSRKTQALVLAPTRELALQVAEAFTSYAKHIDDFTV 196
[139][TOP]
>UniRef100_A4AFV6 ATP-dependent RNA helicase n=1 Tax=marine actinobacterium PHSC20C1
RepID=A4AFV6_9ACTN
Length = 757
Score = 89.4 bits (220), Expect = 2e-16
Identities = 49/118 (41%), Positives = 70/118 (59%), Gaps = 4/118 (3%)
Frame = +3
Query: 237 EGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP 416
EG LGI I LA G FPIQ A + + G+D++GR +TG+GKT+AFG P
Sbjct: 370 EGKSFLDLGIGSNISRQLASMGAESPFPIQAATIPDVLAGKDVLGRGKTGSGKTIAFGAP 429
Query: 417 IMDKIIKFNAKHGR--GRDPLALALAPTRELAKQVEKEFYDSAPN--LDTICVNGGTP 578
+++++++ N R GR P AL LAPTRELA+Q+++ A + L T + GG P
Sbjct: 430 LVERLMENNGGKDRQMGRKPRALILAPTRELAQQIDRTIQPIARSVGLFTTTIVGGVP 487
[140][TOP]
>UniRef100_C5FQP3 ATP-dependent RNA helicase MAK5 n=1 Tax=Microsporum canis CBS
113480 RepID=C5FQP3_NANOT
Length = 749
Score = 89.4 bits (220), Expect = 2e-16
Identities = 59/146 (40%), Positives = 86/146 (58%), Gaps = 14/146 (9%)
Frame = +3
Query: 177 PSLAEFAVADFPYEEGSKND-EGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQ 353
PS+ +AD EE + +GL+++ E+ ++L++ SK PIQ A + +
Sbjct: 155 PSIPFNVLADEEEEEVDVSAWDGLDLRP-----ELQTSLSRLKFSKPTPIQTAAIPDILA 209
Query: 354 GRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRG--------RDPLALALAPTRELAK 509
GRD+IG+A TG+GKTLAFG+PI+ ++ N KHG+G + P+AL L+PTRELA
Sbjct: 210 GRDVIGKAATGSGKTLAFGLPILQYLLNNNNKHGQGGIKSSSKEKKPIALILSPTRELAH 269
Query: 510 QVE---KEFYDSAPNLDT--ICVNGG 572
Q+ KE SAPN+D V GG
Sbjct: 270 QLVKHLKEVTSSAPNVDAYIASVTGG 295
[141][TOP]
>UniRef100_A4REU9 ATP-dependent RNA helicase MAK5 n=1 Tax=Magnaporthe grisea
RepID=MAK5_MAGGR
Length = 779
Score = 89.4 bits (220), Expect = 2e-16
Identities = 54/135 (40%), Positives = 79/135 (58%), Gaps = 14/135 (10%)
Frame = +3
Query: 219 EGSKNDEGLEIKK---LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGT 389
E + DEG ++ + LG+SEEI+S++AK +K IQ A + + G D++G+A TG+
Sbjct: 201 EIDETDEGADVSEWEPLGLSEEIMSSIAKLKFAKPTAIQAATIPEILAGHDVVGKASTGS 260
Query: 390 GKTLAFGIPIMDKIIKFNAK-------HGRGRDPLALALAPTRELAKQVEKEFYDSAPNL 548
GKTLAFGIPI++K + NA G + P+AL L+PTRELA Q+ + L
Sbjct: 261 GKTLAFGIPIVEKWLSINASTQSKRVAEGETKTPIALVLSPTRELAHQLTDHIKNLCAGL 320
Query: 549 DT---IC-VNGGTPI 581
T +C V GG +
Sbjct: 321 ATSPYVCSVTGGLSV 335
[142][TOP]
>UniRef100_C4LK58 Putative ATP-dependent RNA helicase n=1 Tax=Corynebacterium
kroppenstedtii DSM 44385 RepID=C4LK58_CORK4
Length = 558
Score = 88.2 bits (217), Expect = 4e-16
Identities = 48/111 (43%), Positives = 70/111 (63%)
Frame = +3
Query: 216 EEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGK 395
+ G++ ++LG++ EIV ALA+ GI+ F IQ L A+ G+D+IG+ARTG GK
Sbjct: 83 QSGTEQSGTPTFEELGVAAEIVDALAEHGITHTFAIQELTLPLALDGKDLIGQARTGMGK 142
Query: 396 TLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNL 548
TLA+G+P++D+I A P AL +APTRELA QV + +A +L
Sbjct: 143 TLAYGVPLLDRIFDDAAIPELDGTPRALVVAPTRELAYQVADDLTLAARHL 193
[143][TOP]
>UniRef100_C8NWB3 ATP-dependent RNA helicase DeaD n=1 Tax=Corynebacterium genitalium
ATCC 33030 RepID=C8NWB3_9CORY
Length = 440
Score = 88.2 bits (217), Expect = 4e-16
Identities = 44/98 (44%), Positives = 63/98 (64%)
Frame = +3
Query: 231 NDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFG 410
+D+ +LG++ EIV AL + GI ++F IQ L A+ GRD+IG+ARTG GKT AFG
Sbjct: 2 SDQQPTFAELGVAAEIVEALGESGIERVFSIQELTLPLALAGRDLIGQARTGMGKTFAFG 61
Query: 411 IPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKE 524
+P++D++ A P AL + PTRELA QV ++
Sbjct: 62 VPLLDRVFDDAAIEELDGTPRALVITPTRELAVQVSED 99
[144][TOP]
>UniRef100_Q6A6U7 ATP-dependent RNA helicase n=1 Tax=Propionibacterium acnes
RepID=Q6A6U7_PROAC
Length = 700
Score = 87.8 bits (216), Expect = 6e-16
Identities = 50/107 (46%), Positives = 69/107 (64%), Gaps = 2/107 (1%)
Frame = +3
Query: 258 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIK 437
LG+ +EIV+ALAK GI+ F IQ A + A+ GRD++GRA TG+GKTLAFG+P++ ++
Sbjct: 234 LGVPDEIVAALAKTGITDPFRIQIAAIPDAIAGRDVLGRASTGSGKTLAFGVPLLSRL-- 291
Query: 438 FNAKHGRGRDPLALALAPTRELAKQVEKEFYD--SAPNLDTICVNGG 572
+A P AL L+PTRELA Q+ S+ L TI + GG
Sbjct: 292 -SATPREDNRPRALILSPTRELAMQIADALSSLASSMGLSTILIAGG 337
[145][TOP]
>UniRef100_C6WDM6 DEAD/DEAH box helicase domain protein n=1 Tax=Actinosynnema mirum
DSM 43827 RepID=C6WDM6_ACTMD
Length = 501
Score = 87.8 bits (216), Expect = 6e-16
Identities = 51/109 (46%), Positives = 70/109 (64%), Gaps = 2/109 (1%)
Frame = +3
Query: 255 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKII 434
+LG+++E+V ALA GI++ FPIQ A L ++ GRD++GR +TG+GKTLAFG+ ++ ++
Sbjct: 58 ELGLADELVRALATAGITEPFPIQAATLPDSLAGRDLLGRGQTGSGKTLAFGLALLSRLA 117
Query: 435 KFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTIC--VNGGT 575
AK P AL L PTRELA QVE+ A L C V GGT
Sbjct: 118 GGRAK---PHMPRALVLVPTRELAMQVEEALSPFARALGLWCRTVVGGT 163
[146][TOP]
>UniRef100_B6R9D8 Dead-box ATP-dependent rna helicase 53 n=1 Tax=Pseudovibrio sp.
JE062 RepID=B6R9D8_9RHOB
Length = 607
Score = 87.8 bits (216), Expect = 6e-16
Identities = 47/106 (44%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
Frame = +3
Query: 261 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKF 440
G+S + +AL K+ + L P+Q AVL+ ++G+D++ A+TG+GKT+AFGI I +++
Sbjct: 6 GVSPALSTALEKREYTSLTPVQTAVLDEELKGKDLLVSAQTGSGKTVAFGIAIAPELLGD 65
Query: 441 NAKHGRGRDPLALALAPTRELAKQVEKE---FYDSAPNLDTICVNG 569
+ GR +PLAL +APTRELA QV KE Y A T CV G
Sbjct: 66 EERMGRANEPLALCVAPTRELAIQVSKELEWLYGEAGARITTCVGG 111
[147][TOP]
>UniRef100_UPI000185D0B8 ATP-dependent RNA helicase n=1 Tax=Propionibacterium acnes SK137
RepID=UPI000185D0B8
Length = 700
Score = 87.4 bits (215), Expect = 7e-16
Identities = 50/107 (46%), Positives = 69/107 (64%), Gaps = 2/107 (1%)
Frame = +3
Query: 258 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIK 437
LG+ +EIV+ALAK GI+ F IQ A + A+ GRD++GRA TG+GKTLAFG+P++ ++
Sbjct: 234 LGVPDEIVAALAKTGITDPFRIQIAAIPDAIAGRDVLGRASTGSGKTLAFGVPLLSRL-- 291
Query: 438 FNAKHGRGRDPLALALAPTRELAKQVEKEFYD--SAPNLDTICVNGG 572
+A P AL L+PTRELA Q+ S+ L TI + GG
Sbjct: 292 -SATPREDNRPRALILSPTRELAMQIADVLSSLASSMGLSTILIAGG 337
[148][TOP]
>UniRef100_Q7V6R3 Putative ATP-dependent RNA helicase n=1 Tax=Prochlorococcus marinus
str. MIT 9313 RepID=Q7V6R3_PROMM
Length = 635
Score = 87.4 bits (215), Expect = 7e-16
Identities = 52/129 (40%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
Frame = +3
Query: 195 AVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGR 374
+VA EE + E G SE ++ LA+KG + PIQ+A + M GRD++G+
Sbjct: 67 SVAAEACEETEATELVSEFDCFGFSEPLLKTLAEKGYKQPSPIQKAAIPELMLGRDLVGQ 126
Query: 375 ARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSA---PN 545
A+TGTGKT AF +P+++++ H G P L LAPTRELA QV F A P+
Sbjct: 127 AQTGTGKTAAFALPLIERL------HDHGSRPQVLVLAPTRELAMQVADSFRAYAVGHPH 180
Query: 546 LDTICVNGG 572
L + V GG
Sbjct: 181 LKVLAVYGG 189
[149][TOP]
>UniRef100_A4XC61 DEAD/DEAH box helicase domain protein n=1 Tax=Salinispora tropica
CNB-440 RepID=A4XC61_SALTO
Length = 461
Score = 87.4 bits (215), Expect = 7e-16
Identities = 44/98 (44%), Positives = 65/98 (66%)
Frame = +3
Query: 237 EGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP 416
E ++ LG+ + +V LA++GI+ F IQRA + A+ GRD++GR +TG+GKTLAFG+P
Sbjct: 7 ELVDFAALGLPQPLVRELARQGITTPFEIQRATMPDALAGRDVLGRGQTGSGKTLAFGLP 66
Query: 417 IMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFY 530
++ ++ N + R R P AL L PTRELA QV +
Sbjct: 67 LLARLA--NGERARPRHPRALVLVPTRELAMQVSDALF 102
[150][TOP]
>UniRef100_A4X6Q7 DEAD/DEAH box helicase domain protein n=1 Tax=Salinispora tropica
CNB-440 RepID=A4X6Q7_SALTO
Length = 579
Score = 87.4 bits (215), Expect = 7e-16
Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 2/126 (1%)
Frame = +3
Query: 210 PYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGT 389
P E S +DE LG+ +E+++ALA G + PIQR + P + GRD++G+A TGT
Sbjct: 10 PTAEPSTDDEATAFVDLGLRDELLAALAALGYEEPTPIQREAIPPLLAGRDLLGQAATGT 69
Query: 390 GKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLD--TICV 563
GKT AF +P++ ++ + +P+AL L PTRELA QV + F+ L + +
Sbjct: 70 GKTAAFALPMLQRM----PANRSTTNPVALVLVPTRELAVQVSEAFHRYGKELGARVLPI 125
Query: 564 NGGTPI 581
GG PI
Sbjct: 126 YGGQPI 131
[151][TOP]
>UniRef100_B5GLV9 ATP-dependent RNA helicase n=1 Tax=Streptomyces clavuligerus ATCC
27064 RepID=B5GLV9_STRCL
Length = 472
Score = 87.4 bits (215), Expect = 7e-16
Identities = 51/111 (45%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Frame = +3
Query: 255 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKII 434
+LG+ E++ L + G+ FPIQ A L A+ GRD++GRARTG+GKTLAFG+ ++ +
Sbjct: 44 ELGLPVELMGTLTRLGVRDPFPIQAATLPSALAGRDILGRARTGSGKTLAFGLALLARTA 103
Query: 435 KFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVNGGTPI 581
A+ R PLAL L PTRELA+QV + Y A L T V GG I
Sbjct: 104 GLRAEAKR---PLALVLVPTRELAQQVSEALAPYAEALGLRTATVVGGLAI 151
[152][TOP]
>UniRef100_A8M6R3 DEAD/DEAH box helicase domain protein n=1 Tax=Salinispora arenicola
CNS-205 RepID=A8M6R3_SALAI
Length = 469
Score = 87.0 bits (214), Expect = 9e-16
Identities = 43/96 (44%), Positives = 65/96 (67%)
Frame = +3
Query: 243 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 422
++ LG+ + +V ALA++GI+ F IQRA + A+ GRD++GR +TG+GKTLAFG+P++
Sbjct: 17 VDFAALGLPQPLVRALARQGITAPFEIQRATMPDALAGRDVLGRGQTGSGKTLAFGLPLL 76
Query: 423 DKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFY 530
++ + + R R P AL L PTRELA QV +
Sbjct: 77 ARLA--DGERARPRHPRALVLVPTRELAMQVSDALF 110
[153][TOP]
>UniRef100_C3JT40 ATP-dependent RNA helicase RhlE n=2 Tax=Rhodococcus erythropolis
RepID=C3JT40_RHOER
Length = 500
Score = 87.0 bits (214), Expect = 9e-16
Identities = 51/117 (43%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
Frame = +3
Query: 237 EGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP 416
EG LGI +V AL + GI FPIQ A + + GRD++GR TG+GKTLAFG+P
Sbjct: 13 EGRSFVDLGIPAVMVHALRRSGIDAPFPIQSATIPDVLAGRDVLGRGATGSGKTLAFGLP 72
Query: 417 IMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVN--GGTPI 581
++ ++ +K R P L LAPTRELA Q+ K D+A + N GG PI
Sbjct: 73 MLVRLKGGASKRNR---PRGLVLAPTRELAIQIHKALDDAATEIGLRVANAVGGVPI 126
[154][TOP]
>UniRef100_B5KCB4 ATP-dependent RNA helicase RhlE n=1 Tax=Octadecabacter antarcticus
238 RepID=B5KCB4_9RHOB
Length = 439
Score = 87.0 bits (214), Expect = 9e-16
Identities = 48/110 (43%), Positives = 70/110 (63%), Gaps = 2/110 (1%)
Frame = +3
Query: 258 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIK 437
LG++ +++ L +GI PIQ + AM GRD++G A+TG+GKT AFG+P++D ++K
Sbjct: 2 LGLAPRLIAELKSQGIVDPTPIQAQAIPHAMNGRDVMGLAKTGSGKTAAFGLPMIDMLLK 61
Query: 438 FNAKHGRGRDPLALALAPTRELAKQVEK--EFYDSAPNLDTICVNGGTPI 581
K G+ AL LAPTRELAKQ+++ E Y +L T+ V GG I
Sbjct: 62 EQGK-PEGKTARALILAPTRELAKQIQENLEAYTKGTHLKTMLVVGGAGI 110
[155][TOP]
>UniRef100_A4CVH1 Putative ATP-dependent RNA helicase n=1 Tax=Synechococcus sp. WH
7805 RepID=A4CVH1_SYNPV
Length = 607
Score = 87.0 bits (214), Expect = 9e-16
Identities = 49/123 (39%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Frame = +3
Query: 216 EEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGK 395
EE +K + G G SE ++ L +KG + PIQ+A M GRD++G+A+TGTGK
Sbjct: 50 EESTKEESGFA--GFGFSEALLRTLEEKGYKEPSPIQKAAFPELMLGRDLVGQAQTGTGK 107
Query: 396 TLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSA---PNLDTICVN 566
T AF +P+++++ GR P L LAPTRELA QV F A P+L+ + +
Sbjct: 108 TAAFALPLLERL------EGRSSKPRVLVLAPTRELAMQVADSFKAYAAGHPHLNVLAIY 161
Query: 567 GGT 575
GG+
Sbjct: 162 GGS 164
[156][TOP]
>UniRef100_Q57Z07 Nucleolar RNA helicase II, putative n=2 Tax=Trypanosoma brucei
RepID=Q57Z07_9TRYP
Length = 632
Score = 87.0 bits (214), Expect = 9e-16
Identities = 47/111 (42%), Positives = 64/111 (57%)
Frame = +3
Query: 240 GLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPI 419
G + +S +V AL +GI LFP+Q E M+G D++ +ARTG+GKTLAFGIPI
Sbjct: 44 GRPFSEFNLSSGMVKALEAQGIVSLFPVQALTFEAIMRGEDVLVQARTGSGKTLAFGIPI 103
Query: 420 MDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGG 572
++K+ K RGR P A+ PTRELA QV + +L + GG
Sbjct: 104 VEKLNKKEGPLARGRGPAAVIFCPTRELAIQVRDVLAGVSGDLVVAALYGG 154
[157][TOP]
>UniRef100_C4J808 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C4J808_MAIZE
Length = 75
Score = 87.0 bits (214), Expect = 1e-15
Identities = 43/66 (65%), Positives = 48/66 (72%)
Frame = -1
Query: 418 MGIPKARVFPVPVLARPIISRPCIAGSSTALWIGKSLEIPFLAKAETISSEIPSFLISSP 239
MGIP A+V PVPVLARP +S PCIAGS TALW+G SL +P LA TI EIPS ISSP
Sbjct: 1 MGIPNAKVLPVPVLARPTMSLPCIAGSRTALWMGNSLVMPLLASLSTILDEIPSLAISSP 60
Query: 238 SSFLEP 221
S+ P
Sbjct: 61 SAAAPP 66
[158][TOP]
>UniRef100_UPI00019267D5 PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1
Tax=Hydra magnipapillata RepID=UPI00019267D5
Length = 635
Score = 86.7 bits (213), Expect = 1e-15
Identities = 47/106 (44%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
IS++ V L G++KLFP+Q + G D+I +ARTGTGKTL F +P+++K+ +
Sbjct: 58 ISKKTVKKLIANGVNKLFPVQYTTYNAILDGSDVIVQARTGTGKTLGFALPVLEKLKNID 117
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTI-CVNGGTP 578
++ R + PL L LAPTRELA Q+ KE P TI C GG P
Sbjct: 118 SEQKR-KSPLVLTLAPTRELAIQICKEVEKYKPRQMTISCFYGGAP 162
[159][TOP]
>UniRef100_C6R8G6 Cold-shock DEAD box protein A n=1 Tax=Corynebacterium
tuberculostearicum SK141 RepID=C6R8G6_9CORY
Length = 619
Score = 86.7 bits (213), Expect = 1e-15
Identities = 48/110 (43%), Positives = 65/110 (59%)
Frame = +3
Query: 219 EGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKT 398
+ S ND LG+ E+I+ A+AK G +K PIQ + M+GRD++G A+TGTGKT
Sbjct: 47 QDSANDNSQGFAHLGLPEKILEAVAKVGFTKPSPIQEETIPILMEGRDVVGLAQTGTGKT 106
Query: 399 LAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNL 548
AF +P++ +I + R P AL LAPTRELA QV F A +L
Sbjct: 107 AAFALPVLSQI------DTKARHPQALVLAPTRELALQVADSFQSFAESL 150
[160][TOP]
>UniRef100_C2BQP3 DEAD-box helicase n=1 Tax=Corynebacterium pseudogenitalium ATCC
33035 RepID=C2BQP3_9CORY
Length = 619
Score = 86.7 bits (213), Expect = 1e-15
Identities = 48/110 (43%), Positives = 65/110 (59%)
Frame = +3
Query: 219 EGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKT 398
+ S ND LG+ E+I+ A+AK G +K PIQ + M+GRD++G A+TGTGKT
Sbjct: 47 QDSANDNSQGFAHLGLPEKILEAVAKVGFTKPSPIQEETIPILMEGRDVVGLAQTGTGKT 106
Query: 399 LAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNL 548
AF +P++ +I + R P AL LAPTRELA QV F A +L
Sbjct: 107 AAFALPVLSQI------DTKARHPQALVLAPTRELALQVADSFQSFAESL 150
[161][TOP]
>UniRef100_C1XW74 ATP-dependent RNA helicase DbpA n=1 Tax=Meiothermus silvanus DSM
9946 RepID=C1XW74_9DEIN
Length = 538
Score = 86.7 bits (213), Expect = 1e-15
Identities = 51/117 (43%), Positives = 68/117 (58%), Gaps = 6/117 (5%)
Frame = +3
Query: 243 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 422
+E K + E+++AL KG + IQ + A++GRD++G+ARTGTGKTLAF +PI
Sbjct: 1 MEFKDFALRPEVLAALEAKGFTTPTAIQAQAIPLALEGRDVLGQARTGTGKTLAFALPIA 60
Query: 423 DKI-IKFN-----AKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGT 575
K+ F A RGR P A L PTRELA QV E AP+L + + GGT
Sbjct: 61 HKLEAPFRGDSRVASRQRGRPPRAFILTPTRELALQVAGELAWVAPHLHVLPIYGGT 117
[162][TOP]
>UniRef100_B5J1V6 DEAD/DEAH box helicase domain protein n=1 Tax=Octadecabacter
antarcticus 307 RepID=B5J1V6_9RHOB
Length = 435
Score = 86.7 bits (213), Expect = 1e-15
Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 2/115 (1%)
Frame = +3
Query: 243 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 422
++ LG++ +++ L +GI PIQ + AM GRD++G A+TG+GKT AFG+P++
Sbjct: 1 MDFDMLGLAPRLIAELKSQGIIDPTPIQAQAIPHAMNGRDVMGLAKTGSGKTAAFGLPMI 60
Query: 423 DKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVNGGTPI 581
D ++K K G+ AL LAPTRELAKQ+++ Y +L T+ V GG I
Sbjct: 61 DMLLKEQGK-PEGKTARALILAPTRELAKQIQENLAAYTQGTHLKTMLVVGGAGI 114
[163][TOP]
>UniRef100_B1VFV5 ATP-dependent RNA helicase n=1 Tax=Corynebacterium urealyticum DSM
7109 RepID=B1VFV5_CORU7
Length = 778
Score = 86.3 bits (212), Expect = 2e-15
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 3/124 (2%)
Frame = +3
Query: 216 EEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGK 395
E+ +K+D+G LG+S E+ A+ G +K PIQ + M G D++G A+TGTGK
Sbjct: 122 EQENKDDDGAGFGDLGLSPEVFDAVRAVGFTKPSPIQEQTIPLLMAGEDVVGLAQTGTGK 181
Query: 396 TLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNL---DTICVN 566
T AF +PI+ ++ + + R P AL LAPTRELA QV + F D A + + + +
Sbjct: 182 TAAFALPILSRL------NLKSRKPQALVLAPTRELALQVAESFEDFAEKMGGVNILPIY 235
Query: 567 GGTP 578
GG P
Sbjct: 236 GGQP 239
[164][TOP]
>UniRef100_A9CG67 Cold-shock dead-box protein A n=1 Tax=Agrobacterium tumefaciens
str. C58 RepID=A9CG67_AGRT5
Length = 615
Score = 86.3 bits (212), Expect = 2e-15
Identities = 46/106 (43%), Positives = 66/106 (62%), Gaps = 3/106 (2%)
Frame = +3
Query: 261 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKF 440
GI+ I AL K+G L P+Q+A+L P + +D + A+TG+GKT+AFGI + ++
Sbjct: 6 GIAPAIAQALEKRGYKDLTPVQQAMLAPELANKDALVSAQTGSGKTVAFGIALATTLLSE 65
Query: 441 NAKHGRGRDPLALALAPTRELAKQVEKE---FYDSAPNLDTICVNG 569
N + G+ PLALA+APTRELA QV++E Y+ A CV G
Sbjct: 66 NTRFGQASAPLALAIAPTRELAMQVKRELEWLYEFAGVSIASCVGG 111
[165][TOP]
>UniRef100_C2GH43 ATP-dependent RNA helicase n=1 Tax=Corynebacterium glucuronolyticum
ATCC 51866 RepID=C2GH43_9CORY
Length = 455
Score = 86.3 bits (212), Expect = 2e-15
Identities = 48/110 (43%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Frame = +3
Query: 255 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKII 434
+LG+++EI ALA + I F IQ L A++GRD+IG+ARTG GKTL FG+P++D+I
Sbjct: 12 ELGVAQEITDALATQSIVDTFAIQALTLPIALEGRDLIGQARTGMGKTLGFGVPVLDRIF 71
Query: 435 KFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLD--TICVNGGTP 578
P AL + PTREL QV ++ +A NL + GGTP
Sbjct: 72 DDADIEELDGTPRALIVVPTRELCVQVGEDLTRAAVNLPVRVTTIYGGTP 121
[166][TOP]
>UniRef100_C0VQH9 ATP-dependent RNA helicase n=1 Tax=Corynebacterium glucuronolyticum
ATCC 51867 RepID=C0VQH9_9CORY
Length = 455
Score = 86.3 bits (212), Expect = 2e-15
Identities = 48/110 (43%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Frame = +3
Query: 255 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKII 434
+LG+++EI ALA + I F IQ L A++GRD+IG+ARTG GKTL FG+P++D+I
Sbjct: 12 ELGVAQEITDALAAQSIVDTFAIQALTLPIALEGRDLIGQARTGMGKTLGFGVPVLDRIF 71
Query: 435 KFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLD--TICVNGGTP 578
P AL + PTREL QV ++ +A NL + GGTP
Sbjct: 72 DDADIEELDGTPRALIVVPTRELCVQVGEDLTRAAVNLPVRVTTIYGGTP 121
[167][TOP]
>UniRef100_Q41382 DEAD-box ATP-dependent RNA helicase 7 n=1 Tax=Spinacia oleracea
RepID=RH7_SPIOL
Length = 685
Score = 86.3 bits (212), Expect = 2e-15
Identities = 50/111 (45%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
IS+ + L KGI LFPIQ + + G D++GRARTG GKTLAF +PI++ ++
Sbjct: 114 ISKPLKDVLISKGIKALFPIQAMTFDNVIDGCDLVGRARTGQGKTLAFVLPIVESLVNGR 173
Query: 444 AK----HGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVNGGTP 578
K G GR P L L PTRELA QV +F Y A L V GG P
Sbjct: 174 TKDLRRSGHGRLPSVLVLLPTRELATQVLADFQVYGGAVGLTACSVYGGAP 224
[168][TOP]
>UniRef100_UPI00019267D4 PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1
Tax=Hydra magnipapillata RepID=UPI00019267D4
Length = 685
Score = 85.9 bits (211), Expect = 2e-15
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Frame = +3
Query: 192 FAVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIG 371
F V + G + + ++ + IS+ ++ L GI FP+Q +G D+I
Sbjct: 39 FQVEEKENNVGEREADKGDLNRFEISKSTMTKLNANGIKAFFPVQSTTYNAIFEGSDVIV 98
Query: 372 RARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAP-NL 548
+ARTGTGKTLAF +P+++++ N RGR PL LALAPTRELA Q+ +E P N+
Sbjct: 99 QARTGTGKTLAFTLPVIERLNSENLTE-RGRVPLVLALAPTRELAMQIYQEVEKFKPNNV 157
Query: 549 DTICVNGGT 575
C GG+
Sbjct: 158 QVSCFYGGS 166
[169][TOP]
>UniRef100_B7G0R3 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B7G0R3_PHATR
Length = 822
Score = 85.9 bits (211), Expect = 2e-15
Identities = 40/97 (41%), Positives = 62/97 (63%), Gaps = 9/97 (9%)
Frame = +3
Query: 261 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKF 440
G+ + ++ L++KGI+ P+Q P M RD+IGR+RTGTGKTLAFG+P + +++ F
Sbjct: 143 GLDQRVIDVLSEKGITSFTPVQAEAFGPVMARRDVIGRSRTGTGKTLAFGLPALTRLVTF 202
Query: 441 NAKHGR---------GRDPLALALAPTRELAKQVEKE 524
++G+ GR + L PTRELA+QV++E
Sbjct: 203 TTENGKRDARGVMKSGRKVSMIILCPTRELARQVQEE 239
[170][TOP]
>UniRef100_UPI0001B4FB0E putative ATP-dependent RNA helicase n=1 Tax=Streptomyces
hygroscopicus ATCC 53653 RepID=UPI0001B4FB0E
Length = 745
Score = 85.5 bits (210), Expect = 3e-15
Identities = 51/121 (42%), Positives = 69/121 (57%), Gaps = 2/121 (1%)
Frame = +3
Query: 219 EGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKT 398
E SK E + +LG+ E+IV LA+ G++ FPIQ A + AM G+D++GR RTG+GKT
Sbjct: 65 ETSKGPE-ITFAELGLPEQIVRKLAQNGVTTPFPIQAATIPDAMAGKDILGRGRTGSGKT 123
Query: 399 LAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVNGG 572
L+FG+P++ + H + P L L PTRELA QV Y L V GG
Sbjct: 124 LSFGLPLLTSLA---GGHTEKKRPRGLILTPTRELAMQVSDALQPYGDVLGLKLKVVCGG 180
Query: 573 T 575
T
Sbjct: 181 T 181
[171][TOP]
>UniRef100_UPI0001B44FE3 RhlE n=1 Tax=Mycobacterium intracellulare ATCC 13950
RepID=UPI0001B44FE3
Length = 452
Score = 85.5 bits (210), Expect = 3e-15
Identities = 49/120 (40%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Frame = +3
Query: 243 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 422
L +LG+ +EIV ALA+KGI F IQ L A+ G D+IG+ARTG GKT AFG+P++
Sbjct: 10 LTFAQLGVRDEIVRALAEKGIESPFAIQELTLPLALAGDDLIGQARTGMGKTFAFGVPLL 69
Query: 423 DKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEF--------YDSAPNLDTICVNGGTP 578
+I A P AL + PTREL QV + D L + + GG P
Sbjct: 70 QRITSGTAARPLNGTPRALIVVPTRELCLQVTDDLALAAKHLTADEGRRLSVVPIYGGRP 129
[172][TOP]
>UniRef100_UPI000050F870 COG0513: Superfamily II DNA and RNA helicases n=1
Tax=Brevibacterium linens BL2 RepID=UPI000050F870
Length = 489
Score = 85.5 bits (210), Expect = 3e-15
Identities = 49/127 (38%), Positives = 74/127 (58%), Gaps = 18/127 (14%)
Frame = +3
Query: 246 EIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMD 425
+ +LG++ IV+ALA KGI+ FPIQ L A+ G D+IG+A+TGTGKTL FGIP++
Sbjct: 7 DFAELGVAGPIVAALAAKGITHPFPIQAMTLPVALSGADIIGQAKTGTGKTLGFGIPLLQ 66
Query: 426 KII----------------KFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAP--NLD 551
+++ +F + R P AL + PTRELAKQV + ++ ++D
Sbjct: 67 RVVGKNEDGAAPADPENTPEFVSDSTETRLPQALVVVPTRELAKQVAADLVTASTQRDID 126
Query: 552 TICVNGG 572
+ + GG
Sbjct: 127 IMTIYGG 133
[173][TOP]
>UniRef100_Q2J6D3 DEAD/DEAH box helicase-like n=1 Tax=Frankia sp. CcI3
RepID=Q2J6D3_FRASC
Length = 649
Score = 85.5 bits (210), Expect = 3e-15
Identities = 56/136 (41%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Frame = +3
Query: 114 VVARARHFHSNPVPLQFRASLPS--LAEFAVADFPYEEGSKNDEGLEIKKLGISEEIVSA 287
V R R + VPL A +P+ L + P GS +LG+ E VSA
Sbjct: 42 VQRRHRSEKTRSVPLSVTAEVPTDDLTPYEPQTTPSTPGSP--AAPTFAELGVRAETVSA 99
Query: 288 LAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRD 467
L + GI FPIQ L A+ D+IG+ARTGTGKTLAFG+P++ ++ AK G
Sbjct: 100 LTEAGIVHAFPIQELTLPLALARNDIIGQARTGTGKTLAFGVPVVQTVLA--AKEGADGR 157
Query: 468 PLALALAPTRELAKQV 515
P AL + PTREL QV
Sbjct: 158 PQALVVVPTRELCVQV 173
[174][TOP]
>UniRef100_B9J9C9 ATP-dependent RNA helicase protein n=1 Tax=Agrobacterium
radiobacter K84 RepID=B9J9C9_AGRRK
Length = 636
Score = 85.5 bits (210), Expect = 3e-15
Identities = 45/106 (42%), Positives = 66/106 (62%), Gaps = 3/106 (2%)
Frame = +3
Query: 261 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKF 440
GI I ALAK+G L P+Q+++L+P + G+D + A+TG+GKT+AFG+ + ++
Sbjct: 6 GIVPAIAQALAKRGYETLTPVQKSMLDPDLAGKDALVSAQTGSGKTVAFGLALAPTLLDG 65
Query: 441 NAKHGRGRDPLALALAPTRELAKQVEKE---FYDSAPNLDTICVNG 569
+ GR PLALA+APTRELA QV++E Y+ CV G
Sbjct: 66 AERFGRAGTPLALAIAPTRELALQVQRELEWLYELTGATIVSCVGG 111
[175][TOP]
>UniRef100_B1W0R5 Putative DEAD-box RNA helicase n=1 Tax=Streptomyces griseus subsp.
griseus NBRC 13350 RepID=B1W0R5_STRGG
Length = 537
Score = 85.5 bits (210), Expect = 3e-15
Identities = 64/182 (35%), Positives = 87/182 (47%), Gaps = 2/182 (1%)
Frame = +3
Query: 42 ALSRRGAATFIAASTVTGELRQLPVVARARHFHSNPVPLQFRASLPSLAEFAVADFPYEE 221
A R GA A R+ P VA F +P +LPS+ FA D P
Sbjct: 31 ANGRGGAPRSRAQGGSRPPARRKPAVAPPAEF---ALPETVTPALPSVEAFADLDMP--- 84
Query: 222 GSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTL 401
++ LA +G+++ FPIQ A L ++ GRD++GR RTG+GKTL
Sbjct: 85 ----------------PGLLKTLAAQGVTEPFPIQGATLPNSLAGRDILGRGRTGSGKTL 128
Query: 402 AFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVNGGT 575
AFG+ ++ + + G R PLA+ L PTRELA+QV Y +A NL V GG
Sbjct: 129 AFGLALLARTA---GRRGEPRAPLAMVLVPTRELAQQVTDALTPYATAVNLRLATVVGGM 185
Query: 576 PI 581
I
Sbjct: 186 SI 187
[176][TOP]
>UniRef100_C1WLE9 DNA/RNA helicase, superfamily II n=1 Tax=Kribbella flavida DSM
17836 RepID=C1WLE9_9ACTO
Length = 554
Score = 85.5 bits (210), Expect = 3e-15
Identities = 51/128 (39%), Positives = 74/128 (57%), Gaps = 4/128 (3%)
Frame = +3
Query: 201 ADFPYEEGSKN--DEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGR 374
+D Y+E + + L LG+ E+V+ALA G+ K FPIQ A L ++ G+D++GR
Sbjct: 49 SDAGYDEAAATVVSDDLTFADLGLPAELVTALAAAGVHKPFPIQAATLPDSLAGKDVLGR 108
Query: 375 ARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNL 548
RTG+GKT AF +P++ ++ + R P AL LAPTRELA Q++ A L
Sbjct: 109 GRTGSGKTYAFVLPLIARLATSGTRR-RPNQPRALILAPTRELATQIQASISPLTDAFGL 167
Query: 549 DTICVNGG 572
T+ V GG
Sbjct: 168 RTMTVFGG 175
[177][TOP]
>UniRef100_C0WJ74 ATP-dependent RNA helicase n=1 Tax=Corynebacterium accolens ATCC
49725 RepID=C0WJ74_9CORY
Length = 452
Score = 85.5 bits (210), Expect = 3e-15
Identities = 45/110 (40%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Frame = +3
Query: 255 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKII 434
+LG++ EI LA +GI++ F IQ L A+ G+D+IG+ARTG GKT FG+P++D++
Sbjct: 13 ELGVAAEICDGLADRGIARTFAIQELTLPIALNGQDLIGQARTGMGKTFGFGVPLLDRVF 72
Query: 435 KFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDT--ICVNGGTP 578
P AL + PTRELA+QV + D+A +L + GG P
Sbjct: 73 DDADIAPPDGTPRALIVVPTRELAQQVTADLQDAAAHLPVRLAAIYGGRP 122
[178][TOP]
>UniRef100_B5I1H1 ATP-dependent RNA helicase n=1 Tax=Streptomyces sviceus ATCC 29083
RepID=B5I1H1_9ACTO
Length = 469
Score = 85.5 bits (210), Expect = 3e-15
Identities = 50/129 (38%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Frame = +3
Query: 201 ADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRAR 380
+D P GS + L + ++ L + G+ + FPIQ A L A+ GRD++GR R
Sbjct: 13 SDHPDRRGS-DSPAASFADLALPAPVLRTLGEHGVREPFPIQAATLPDALAGRDVLGRGR 71
Query: 381 TGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDT 554
TG+GKTLAFG+P+ +++ + + PLAL L PTRELA+QV + Y A L
Sbjct: 72 TGSGKTLAFGLPL---LVRTAGQRAEAKQPLALILVPTRELAQQVSEALAPYAEALGLRM 128
Query: 555 ICVNGGTPI 581
V GG I
Sbjct: 129 AAVVGGMSI 137
[179][TOP]
>UniRef100_B6AJH7 DEAD/DEAH box helicase family protein n=1 Tax=Cryptosporidium muris
RN66 RepID=B6AJH7_9CRYT
Length = 667
Score = 85.5 bits (210), Expect = 3e-15
Identities = 48/119 (40%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Frame = +3
Query: 234 DEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGI 413
+E ++ S E + L K+GI++LFPIQ D++G+A+TGTGKTLAF +
Sbjct: 11 NEESSVELYPFSTETMEILKKRGINRLFPIQAKSFNYIFNKNDVLGKAKTGTGKTLAFVL 70
Query: 414 PIMDKIIKFNAKHGR--GRDPLALALAPTRELAKQVEKEFYDSAPN--LDTICVNGGTP 578
P+++++IK H GR PL L L PTRELA+QV EF N + + GG+P
Sbjct: 71 PVIERLIKKGKFHTNEIGRKPLVLVLLPTRELAQQVSNEFELMKGNNRYKVVSIYGGSP 129
[180][TOP]
>UniRef100_UPI0001B59FC5 RhlE n=1 Tax=Mycobacterium avium subsp. avium ATCC 25291
RepID=UPI0001B59FC5
Length = 505
Score = 85.1 bits (209), Expect = 4e-15
Identities = 48/113 (42%), Positives = 65/113 (57%)
Frame = +3
Query: 243 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 422
L +LG+ +EIV AL +KGI F IQ L A+ G D+IG+ARTG GKT AFG+P++
Sbjct: 10 LTFAQLGVRDEIVRALDEKGIQHSFAIQELTLPLALAGDDLIGQARTGMGKTFAFGVPLL 69
Query: 423 DKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTPI 581
+I A P AL + PTREL QV + +A +L +GG P+
Sbjct: 70 QRITAGTAPRALNGTPRALVVVPTRELCLQVTDDLTLAAKHL---TADGGRPL 119
[181][TOP]
>UniRef100_Q3AJ35 DEAD/DEAH box helicase-like n=1 Tax=Synechococcus sp. CC9605
RepID=Q3AJ35_SYNSC
Length = 607
Score = 85.1 bits (209), Expect = 4e-15
Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Frame = +3
Query: 261 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKF 440
G SE ++ LA KG S+ PIQ+A M GRD++G+A+TGTGKT AF +P+++++
Sbjct: 63 GFSEALLRTLADKGYSEPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLERL--- 119
Query: 441 NAKHGRGRDPLALALAPTRELAKQVEKEF--YDSA-PNLDTICVNGGT 575
+ P AL LAPTRELA QV + F Y + P+L + V GGT
Sbjct: 120 ---ESGQKTPQALVLAPTRELAMQVAESFKAYSAGHPHLKVLAVYGGT 164
[182][TOP]
>UniRef100_C3PFM0 ATP-dependent RNA helicase n=1 Tax=Corynebacterium aurimucosum ATCC
700975 RepID=C3PFM0_CORA7
Length = 669
Score = 85.1 bits (209), Expect = 4e-15
Identities = 48/114 (42%), Positives = 65/114 (57%)
Frame = +3
Query: 216 EEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGK 395
EE S ND LG+ +++ A++K G +K PIQ + M+GRD++G A+TGTGK
Sbjct: 54 EETSANDNSQGFAHLGLPDDVQEAVSKVGFTKPSPIQEETIPILMEGRDVVGLAQTGTGK 113
Query: 396 TLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTI 557
T AF +P++ +I R P AL LAPTRELA QV F A +L I
Sbjct: 114 TAAFALPVLSQI------DTEARYPQALVLAPTRELALQVADSFQSFADHLGRI 161
[183][TOP]
>UniRef100_C0ZZM5 Putative ATP-dependent RNA helicase n=1 Tax=Rhodococcus
erythropolis PR4 RepID=C0ZZM5_RHOE4
Length = 686
Score = 85.1 bits (209), Expect = 4e-15
Identities = 58/162 (35%), Positives = 89/162 (54%), Gaps = 2/162 (1%)
Frame = +3
Query: 99 LRQLPVVARARHFHSNPVPLQFRASLPSLAEFAVADFPYEEGSKNDEGLEIKKLGISEEI 278
LR +PVV R +N V + +S ++ + V EE + G+ ++G+ E++
Sbjct: 20 LRDVPVVRRGFRV-TNAVQM---SSSENIEDPTVNTPAAEEAVATEPGITFAEIGLPEQL 75
Query: 279 VSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGR 458
V+ALA+ I+ PIQ + A+ G +++GRA+TG+GKTLAFG+P++ ++ + +
Sbjct: 76 VAALARNSITVPSPIQAQSIPDALAGTNVLGRAQTGSGKTLAFGLPMLTRLSRHEDRPAA 135
Query: 459 GRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVNGGTP 578
R P AL L PTRELA QV Y A L GGTP
Sbjct: 136 KR-PRALVLVPTRELAFQVVDSLNSYAGALGLTVRPAVGGTP 176
[184][TOP]
>UniRef100_A2C3H6 Putative ATP-dependent RNA helicase n=1 Tax=Prochlorococcus marinus
str. NATL1A RepID=A2C3H6_PROM1
Length = 589
Score = 85.1 bits (209), Expect = 4e-15
Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
Frame = +3
Query: 216 EEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGK 395
EE +N E + SEE++ ++ KG S PIQ+A + + GRD++G+A+TGTGK
Sbjct: 28 EESEQNSEN-GFSEFNFSEELIQTISDKGYSSPTPIQKAAIPELLLGRDLVGQAQTGTGK 86
Query: 396 TLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSA-PNLDTICVN 566
T AF +PI+++ +K N H P L LAPTRELA QV + F Y + P+ + +
Sbjct: 87 TAAFALPILER-LKKNVGH-----PQVLVLAPTRELAMQVAESFRTYSAGHPHFKVLAIY 140
Query: 567 GGT 575
GG+
Sbjct: 141 GGS 143
[185][TOP]
>UniRef100_A1RAH9 Putative ATP-dependent RNA helicase n=1 Tax=Arthrobacter aurescens
TC1 RepID=A1RAH9_ARTAT
Length = 576
Score = 85.1 bits (209), Expect = 4e-15
Identities = 50/109 (45%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
Frame = +3
Query: 258 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIK 437
LG + I +LA GI + FPIQ L + GRD++GR RTG+GKT+AF IP++ ++ +
Sbjct: 10 LGTPKPIAESLAADGIEEAFPIQVKTLPDTLAGRDVLGRGRTGSGKTIAFAIPLVARLAE 69
Query: 438 FNAKHGR--GRDPLALALAPTRELAKQVEK--EFYDSAPNLDTICVNGG 572
AKH R GR P+ L LAPTRELA Q+ E A L+T + GG
Sbjct: 70 REAKHFRKPGR-PMGLVLAPTRELATQINATIEPLAKAMGLNTTVIYGG 117
[186][TOP]
>UniRef100_A0K1H7 DEAD/DEAH box helicase domain protein n=1 Tax=Arthrobacter sp. FB24
RepID=A0K1H7_ARTS2
Length = 635
Score = 85.1 bits (209), Expect = 4e-15
Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Frame = +3
Query: 258 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIK 437
LG +E+ L +GI++ FPIQ L + GRD++GR RTG+GKT+AF IP++ ++ +
Sbjct: 7 LGTPKELADTLTAQGITEPFPIQVKTLPDTLAGRDVLGRGRTGSGKTIAFAIPLVARLAE 66
Query: 438 FNAKHGR--GRDPLALALAPTRELAKQVEK--EFYDSAPNLDTICVNGG 572
AKH R GR P+ L LAPTRELA Q+ E A L+T + GG
Sbjct: 67 REAKHFRKPGR-PMGLVLAPTRELATQINATIEPMAKAMGLNTTVIYGG 114
[187][TOP]
>UniRef100_Q05ZS3 DEAD/DEAH box helicase-like protein n=1 Tax=Synechococcus sp. BL107
RepID=Q05ZS3_9SYNE
Length = 607
Score = 85.1 bits (209), Expect = 4e-15
Identities = 49/108 (45%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Frame = +3
Query: 261 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKF 440
G SE ++ LA+KG S PIQ+A M GRD++G+A+TGTGKT AF +P+++++
Sbjct: 63 GFSEALLKTLAEKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLERL--- 119
Query: 441 NAKHGRGRDPLALALAPTRELAKQVEKEFYDSA---PNLDTICVNGGT 575
+ GR + P L LAPTRELA QV F A P+L + V GGT
Sbjct: 120 --ESGR-KTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGT 164
[188][TOP]
>UniRef100_D0CK37 Cold-shock deAd box protein a n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CK37_9SYNE
Length = 607
Score = 85.1 bits (209), Expect = 4e-15
Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Frame = +3
Query: 261 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKF 440
G SE ++ LA KG S+ PIQ+A M GRD++G+A+TGTGKT AF +P+++++
Sbjct: 63 GFSEALLRTLADKGYSEPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLERL--- 119
Query: 441 NAKHGRGRDPLALALAPTRELAKQVEKEF--YDSA-PNLDTICVNGGT 575
+ P AL LAPTRELA QV + F Y + P+L + V GGT
Sbjct: 120 ---ESGQKTPQALVLAPTRELAMQVAESFKAYSAGHPHLKVLAVYGGT 164
[189][TOP]
>UniRef100_B0U160 DEAD-box subfamily ATP-dependent helicase n=2 Tax=Francisella
philomiragia RepID=B0U160_FRAP2
Length = 581
Score = 85.1 bits (209), Expect = 4e-15
Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Frame = +3
Query: 246 EIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMD 425
+ +LG++++I+ + K G PIQ+ + + GRD++G+A+TGTGKT AF +P+++
Sbjct: 8 DFSQLGLNQDIIDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLIN 67
Query: 426 KIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSA---PNLDTICVNGG 572
+ R R P L LAPTRELA QV ++F A PNLD C+ GG
Sbjct: 68 NM----DLESRDRAPQVLVLAPTRELAIQVAEQFQAFAKNIPNLDVACIYGG 115
[190][TOP]
>UniRef100_C4RKM6 RNA helicase n=1 Tax=Micromonospora sp. ATCC 39149
RepID=C4RKM6_9ACTO
Length = 707
Score = 85.1 bits (209), Expect = 4e-15
Identities = 45/93 (48%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Frame = +3
Query: 243 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 422
++ LG+ + +V AL + GI+ FPIQRA + A+ GRD++GR +TG+GKTLAFG+P++
Sbjct: 102 VDFAALGLPQPLVQALGRLGIATPFPIQRATVPDALAGRDVLGRGQTGSGKTLAFGLPVI 161
Query: 423 DKIIKFNAKHGRGR--DPLALALAPTRELAKQV 515
++ AK R R P AL L PTRELA QV
Sbjct: 162 ARL----AKRARARPLHPRALVLVPTRELAMQV 190
[191][TOP]
>UniRef100_C2CL09 Superfamily II helicase n=1 Tax=Corynebacterium striatum ATCC 6940
RepID=C2CL09_CORST
Length = 678
Score = 85.1 bits (209), Expect = 4e-15
Identities = 48/114 (42%), Positives = 65/114 (57%)
Frame = +3
Query: 216 EEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGK 395
E+ S ND LG+ EE+ A+AK G ++ PIQ + M+GRD++G A+TGTGK
Sbjct: 45 EDTSANDNSQGFATLGLPEEVQQAVAKVGFTQPSPIQEQTIPILMEGRDVVGLAQTGTGK 104
Query: 396 TLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTI 557
T AF +P++ ++ R P AL LAPTRELA QV F A +L I
Sbjct: 105 TAAFALPVLSQV------DPEVRHPQALVLAPTRELALQVADSFQSFADHLGRI 152
[192][TOP]
>UniRef100_C4M986 DEAD/DEAH box helicase, putative n=1 Tax=Entamoeba histolytica
HM-1:IMSS RepID=C4M986_ENTHI
Length = 723
Score = 85.1 bits (209), Expect = 4e-15
Identities = 43/107 (40%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
+SE L K+GI+ LFPIQ + P +D++G+A+TG+GKT++F +P+M+++ N
Sbjct: 74 VSESAQEMLKKRGINSLFPIQVSTYSPIYYRKDVVGKAQTGSGKTISFTLPLMERLRAEN 133
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYD-SAPNLDTICVNGGTPI 581
+ +G++P + L+PTRELA Q+ +EF S ICV GG I
Sbjct: 134 ER--KGKNPRVICLSPTRELAIQIAEEFTQCSCGKFKVICVYGGVDI 178
[193][TOP]
>UniRef100_B0EI10 ATP-dependent RNA helicase DDX50, putative n=1 Tax=Entamoeba dispar
SAW760 RepID=B0EI10_ENTDI
Length = 689
Score = 85.1 bits (209), Expect = 4e-15
Identities = 43/107 (40%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFN 443
+SE L K+GI+ LFPIQ + P +D++G+A+TG+GKT++F +P+M+++ N
Sbjct: 74 VSESAQEMLKKRGINSLFPIQVSTYSPIYYRKDVVGKAQTGSGKTISFTLPLMERLRAEN 133
Query: 444 AKHGRGRDPLALALAPTRELAKQVEKEFYD-SAPNLDTICVNGGTPI 581
+ +G++P + L+PTRELA Q+ +EF S ICV GG I
Sbjct: 134 ER--KGKNPRVICLSPTRELAIQIAEEFTQCSCGKFKVICVYGGVDI 178
[194][TOP]
>UniRef100_Q7U7R1 Probable ATP-dependent RNA helicase DeaD n=1 Tax=Synechococcus sp.
WH 8102 RepID=Q7U7R1_SYNPX
Length = 598
Score = 84.7 bits (208), Expect = 5e-15
Identities = 48/108 (44%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Frame = +3
Query: 261 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKF 440
G SE ++ LA KG S+ PIQ+A M GRD++G+A+TGTGKT AF +P+++++
Sbjct: 51 GFSEALLKTLADKGYSEPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLERLASG 110
Query: 441 NAKHGRGRDPLALALAPTRELAKQVEKEF--YDSA-PNLDTICVNGGT 575
+ P AL LAPTRELA QV F Y + P+L + V GGT
Sbjct: 111 Q------KTPQALVLAPTRELAMQVADSFKAYSAGHPHLKVLAVYGGT 152
[195][TOP]
>UniRef100_Q73UQ4 RhlE n=1 Tax=Mycobacterium avium subsp. paratuberculosis
RepID=Q73UQ4_MYCPA
Length = 505
Score = 84.7 bits (208), Expect = 5e-15
Identities = 48/113 (42%), Positives = 65/113 (57%)
Frame = +3
Query: 243 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 422
L +LG+ +EIV AL +KGI F IQ L A+ G D+IG+ARTG GKT AFG+P++
Sbjct: 10 LTFAQLGVRDEIVRALDEKGIQHPFAIQELTLPLALAGDDLIGQARTGMGKTFAFGVPLL 69
Query: 423 DKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVNGGTPI 581
+I A P AL + PTREL QV + +A +L +GG P+
Sbjct: 70 QRITAGTAPRALNGTPRALVVVPTRELCLQVTDDLTLAAKHL---TADGGRPL 119
[196][TOP]
>UniRef100_A5GLX2 Superfamily II DNA/RNA helicase n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GLX2_SYNPW
Length = 606
Score = 84.7 bits (208), Expect = 5e-15
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
Frame = +3
Query: 219 EGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKT 398
EG + G SE ++ L KG + PIQ+A M GRD++G+A+TGTGKT
Sbjct: 49 EGESAESASGFAGFGFSEALLKTLDAKGYKEPSPIQKAAFPELMLGRDLVGQAQTGTGKT 108
Query: 399 LAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSA---PNLDTICVNG 569
AF +P+++++ GR P L LAPTRELA QV F A P+L+ + + G
Sbjct: 109 AAFALPLLERL------DGRSNTPRVLVLAPTRELAMQVADSFKAYAAGHPHLNVLAIYG 162
Query: 570 GT 575
G+
Sbjct: 163 GS 164
[197][TOP]
>UniRef100_Q0JWH5 Putative DEAD-box RNA helicase n=1 Tax=Streptomyces ambofaciens
RepID=Q0JWH5_STRAM
Length = 499
Score = 84.7 bits (208), Expect = 5e-15
Identities = 54/146 (36%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
Frame = +3
Query: 150 VPLQFRASLPSLAEFAVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQR 329
+P +LPS FA D P E+++AL +G++ FPIQ
Sbjct: 57 LPETITPALPSAEAFADLDMP-------------------RELLAALGSQGVAVPFPIQS 97
Query: 330 AVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAK 509
A L ++ GRD++GR RTG+GKTLAFG+ ++ + K + R PL L L PTRELA+
Sbjct: 98 ATLPNSLAGRDVLGRGRTGSGKTLAFGLALLARTAK---RRAEARQPLGLVLVPTRELAQ 154
Query: 510 QVEKEF--YDSAPNLDTICVNGGTPI 581
QV Y + L V GG PI
Sbjct: 155 QVTDALTPYARSVKLRLATVVGGMPI 180
[198][TOP]
>UniRef100_C4RDR9 DEAD/DEAH box helicase domain-containing protein n=1
Tax=Micromonospora sp. ATCC 39149 RepID=C4RDR9_9ACTO
Length = 576
Score = 84.7 bits (208), Expect = 5e-15
Identities = 47/119 (39%), Positives = 70/119 (58%), Gaps = 2/119 (1%)
Frame = +3
Query: 231 NDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFG 410
+DE LG+ E++ AL+ G + PIQR + P + GRD++G+A TGTGKT AF
Sbjct: 22 DDEASAFTDLGLRAELLGALSALGYEEPTPIQREAIPPLLAGRDLLGQAATGTGKTAAFA 81
Query: 411 IPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLD--TICVNGGTPI 581
+P++ ++ A G +P+AL L PTRELA QV + F+ +L + + GG PI
Sbjct: 82 LPLLHRMPDGRA----GGEPVALVLVPTRELAVQVSEAFHRYGKDLGARVLPIYGGQPI 136
[199][TOP]
>UniRef100_C2CQX2 ATP-dependent RNA helicase n=1 Tax=Corynebacterium striatum ATCC
6940 RepID=C2CQX2_CORST
Length = 442
Score = 84.7 bits (208), Expect = 5e-15
Identities = 47/109 (43%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
Frame = +3
Query: 258 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIK 437
LG++ EIV ALA +GI + F IQ L A+ G+D+IG+ARTG GKTL FG+P++D++
Sbjct: 17 LGVAAEIVDALASRGIVRTFAIQELTLPIALGGQDLIGQARTGMGKTLGFGVPVLDRVFD 76
Query: 438 FNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLD--TICVNGGTP 578
P AL + PTRELA QV ++ ++ NL + GG P
Sbjct: 77 DADIEELDGTPRALIVVPTRELAVQVGEDLTLASQNLPLRLATIYGGRP 125
[200][TOP]
>UniRef100_UPI0001B45E07 ATP-dependent RNA helicase n=1 Tax=Mycobacterium intracellulare
ATCC 13950 RepID=UPI0001B45E07
Length = 454
Score = 84.3 bits (207), Expect = 6e-15
Identities = 43/86 (50%), Positives = 59/86 (68%)
Frame = +3
Query: 258 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIK 437
LG+ + IVSALA +GI+ FPIQ L + GRD++GR +TG+GKTLAF IP++ ++ +
Sbjct: 10 LGVGKHIVSALAARGITHPFPIQVETLPDTLAGRDVLGRGKTGSGKTLAFSIPLVSRLSR 69
Query: 438 FNAKHGRGRDPLALALAPTRELAKQV 515
N + R P L LAPTRELA Q+
Sbjct: 70 GNRRPAR---PSGLVLAPTRELATQI 92
[201][TOP]
>UniRef100_Q82F17 Putative ATP-dependent RNA helicase n=1 Tax=Streptomyces
avermitilis RepID=Q82F17_STRAW
Length = 510
Score = 84.3 bits (207), Expect = 6e-15
Identities = 52/146 (35%), Positives = 77/146 (52%), Gaps = 2/146 (1%)
Frame = +3
Query: 150 VPLQFRASLPSLAEFAVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQR 329
+P+ +LP++ FA D P E +++AL +G+++ FPIQ
Sbjct: 65 LPVTLTPALPAVEAFAALDMP-------------------ERLLTALGAEGVTEPFPIQA 105
Query: 330 AVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAK 509
A L ++ GRD++GR RTG+GKTLAFG+ ++ ++ + + R PL L L PTRELA+
Sbjct: 106 ATLPNSLAGRDVLGRGRTGSGKTLAFGLALLARL---DGQRAEPRQPLGLVLVPTRELAQ 162
Query: 510 QVEKEF--YDSAPNLDTICVNGGTPI 581
QV Y A L V GG I
Sbjct: 163 QVTDALTPYARALRLRLTTVVGGLSI 188
[202][TOP]
>UniRef100_Q0C354 ATP-dependent RNA helicase RhlE n=1 Tax=Hyphomonas neptunium ATCC
15444 RepID=Q0C354_HYPNA
Length = 464
Score = 84.3 bits (207), Expect = 6e-15
Identities = 48/114 (42%), Positives = 68/114 (59%), Gaps = 2/114 (1%)
Frame = +3
Query: 246 EIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMD 425
+ + LG++ I+++L K G + PIQ + +QGRD++G A+TGTGKTLAF PI+D
Sbjct: 8 DFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPILD 67
Query: 426 KIIKFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVNGGTPI 581
++ + NA R L LAPTRELA Q+ F Y + NL + V GG I
Sbjct: 68 RLSR-NASPAPVRGTRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKI 120
[203][TOP]
>UniRef100_C3PEN7 Putative ATP-dependent RNA helicase n=1 Tax=Corynebacterium
aurimucosum ATCC 700975 RepID=C3PEN7_CORA7
Length = 462
Score = 84.3 bits (207), Expect = 6e-15
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Frame = +3
Query: 255 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKII 434
+LG++ EI ALA GI++ F IQ L A+ G+D+IG+ARTG GKT FG+P++D++
Sbjct: 18 ELGVAVEICDALADNGITRTFAIQELTLPIALNGQDLIGQARTGMGKTYGFGVPLLDRVF 77
Query: 435 KFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPN--LDTICVNGGTP 578
P AL +APTRELA QV + +A N L + + GG P
Sbjct: 78 DDADIPELDGTPRALVIAPTRELAIQVSGDLELAAANLPLSVVTLCGGRP 127
[204][TOP]
>UniRef100_B9JY37 Cold-shock dead-box protein A n=1 Tax=Agrobacterium vitis S4
RepID=B9JY37_AGRVS
Length = 673
Score = 84.3 bits (207), Expect = 6e-15
Identities = 43/106 (40%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Frame = +3
Query: 261 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKF 440
GI I AL K+G + L P+Q+A+++ ++GRD + A+TG+GKT+AFG+ + ++
Sbjct: 6 GIVPAIAEALRKRGYATLTPVQQAMIDTDLEGRDALVSAQTGSGKTVAFGLALAPTLLGS 65
Query: 441 NAKHGRGRDPLALALAPTRELAKQVEKE---FYDSAPNLDTICVNG 569
+ GR PLAL +APTRELA QV++E Y++ + CV G
Sbjct: 66 ENRFGRAVKPLALCIAPTRELALQVQRELEWLYENTGAIFATCVGG 111
[205][TOP]
>UniRef100_A9WQU8 ATP-dependent RNA helicase n=1 Tax=Renibacterium salmoninarum ATCC
33209 RepID=A9WQU8_RENSM
Length = 631
Score = 84.3 bits (207), Expect = 6e-15
Identities = 48/108 (44%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Frame = +3
Query: 258 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIK 437
LG+ + +VS L +GI FPIQ L ++ GRD++GR RTG+GKTLAFG+P++ ++ +
Sbjct: 79 LGVPKALVSVLDAQGIDAPFPIQAKTLPDSLGGRDVLGRGRTGSGKTLAFGLPLVARLAE 138
Query: 438 FNAKHGRGRD-PLALALAPTRELAKQVEK--EFYDSAPNLDTICVNGG 572
A + R + PL L LAPTRELA Q+ E A L+T + GG
Sbjct: 139 REAAYMRKPNRPLGLVLAPTRELATQINATIEPLAKAMGLNTTVIYGG 186
[206][TOP]
>UniRef100_A4IX82 Cold-shock DEAD/DEAH box helicase n=1 Tax=Francisella tularensis
subsp. tularensis WY96-3418 RepID=A4IX82_FRATW
Length = 569
Score = 84.3 bits (207), Expect = 6e-15
Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Frame = +3
Query: 246 EIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMD 425
+ +LG++++IV + K G PIQ+ + + GRD++G+A+TGTGKT AF +P+++
Sbjct: 8 DFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLIN 67
Query: 426 KIIKFNAKHGRGRDPLALALAPTRELAKQVEKE---FYDSAPNLDTICVNGG 572
+ R R P L LAPTRELA QV ++ F + PNLD C+ GG
Sbjct: 68 NM----DLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGG 115
[207][TOP]
>UniRef100_Q1RQZ3 Putative DEAD-box RNA helicase n=1 Tax=Streptomyces ambofaciens
ATCC 23877 RepID=Q1RQZ3_STRAM
Length = 499
Score = 84.3 bits (207), Expect = 6e-15
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Frame = +3
Query: 258 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIK 437
L + E+++AL +G++ FPIQ A L ++ GRD++GR RTG+GKTLAFG+ ++ + K
Sbjct: 74 LDMPRELLAALGSQGVTVPFPIQAATLPNSLAGRDVLGRGRTGSGKTLAFGLALLARTAK 133
Query: 438 FNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVNGGTPI 581
+ R PL L L PTRELA+QV Y + L V GG PI
Sbjct: 134 ---RRAEARQPLGLVLVPTRELAQQVTDALTPYARSVKLRLATVVGGMPI 180
[208][TOP]
>UniRef100_C6R3C4 Cold-shock DEAD box protein A n=1 Tax=Rothia mucilaginosa ATCC
25296 RepID=C6R3C4_9MICC
Length = 744
Score = 84.3 bits (207), Expect = 6e-15
Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 10/138 (7%)
Frame = +3
Query: 195 AVADFPYEEGSKND-------EGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQ 353
A A+ P EE + + EG+ LG+ +++AL + G K PIQ + ++
Sbjct: 43 ATAEAPAEETAAEETAEKAEEEGVRFTDLGLDARVLAALEEVGYEKPSPIQEQTIPLLLE 102
Query: 354 GRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYD 533
G D++G A+TGTGKT AF +P + ++ + +G RD L LAPTRELA QV + F
Sbjct: 103 GHDVVGLAQTGTGKTAAFALPALSRMAELADVNGISRDTQVLVLAPTRELALQVAEAFSS 162
Query: 534 SAPNLD---TICVNGGTP 578
A +++ + + GG+P
Sbjct: 163 YATHMEDFTVLPIYGGSP 180
[209][TOP]
>UniRef100_C4EKP3 DNA/RNA helicase, superfamily II (Fragment) n=1
Tax=Streptosporangium roseum DSM 43021
RepID=C4EKP3_STRRS
Length = 560
Score = 84.3 bits (207), Expect = 6e-15
Identities = 43/90 (47%), Positives = 61/90 (67%)
Frame = +3
Query: 246 EIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMD 425
E LG+ + +V+ L+++GI FPIQ A + + G D++GR +TG+GKTLAFG+P+M
Sbjct: 21 EFTLLGLPKPLVTGLSRQGIDSPFPIQSATIPDILAGSDVLGRGQTGSGKTLAFGLPMMA 80
Query: 426 KIIKFNAKHGRGRDPLALALAPTRELAKQV 515
+I A+ GR PLA+ L PTRELA QV
Sbjct: 81 RIAGSKARPGR---PLAVVLVPTRELAMQV 107
[210][TOP]
>UniRef100_C2GIZ2 Superfamily II helicase n=1 Tax=Corynebacterium glucuronolyticum
ATCC 51866 RepID=C2GIZ2_9CORY
Length = 718
Score = 84.3 bits (207), Expect = 6e-15
Identities = 53/132 (40%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
Frame = +3
Query: 201 ADFPYEEGSKNDEG-----LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDM 365
AD ++N EG L KLG+ +I+ A+ K G PIQ + + GRD+
Sbjct: 91 ADDEDARAAENSEGTDSTDLSFDKLGLPSDILEAVKKVGFETPSPIQARTIPALLDGRDV 150
Query: 366 IGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVE---KEFYDS 536
+G A+TGTGKT AF +PI+ +I K N R P AL LAPTRELA QV +EF D
Sbjct: 151 VGLAQTGTGKTAAFALPIIARIDKSN------RSPQALVLAPTRELALQVADAFQEFADH 204
Query: 537 APNLDTICVNGG 572
++ + + GG
Sbjct: 205 VGGINVLPIYGG 216
[211][TOP]
>UniRef100_C2ACM5 DNA/RNA helicase, superfamily II n=1 Tax=Thermomonospora curvata
DSM 43183 RepID=C2ACM5_THECU
Length = 533
Score = 84.3 bits (207), Expect = 6e-15
Identities = 50/102 (49%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Frame = +3
Query: 273 EIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKH 452
EI AL +GI FPIQ L ++G D+IG+ARTGTGKTLAFGIP++ +I +H
Sbjct: 4 EIADALESEGIVDAFPIQEMALPIGLRGYDIIGQARTGTGKTLAFGIPLLQRI-----EH 58
Query: 453 GRGRDPLALALAPTRELAKQVEKEFYDSAPNLDT--ICVNGG 572
G G+ P L LAPTRELA QV + + L T + V GG
Sbjct: 59 G-GKAPRGLVLAPTRELASQVTDDLLVAGGKLGTRVVAVYGG 99
[212][TOP]
>UniRef100_C0VTD2 Superfamily II helicase n=1 Tax=Corynebacterium glucuronolyticum
ATCC 51867 RepID=C0VTD2_9CORY
Length = 718
Score = 84.3 bits (207), Expect = 6e-15
Identities = 53/132 (40%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
Frame = +3
Query: 201 ADFPYEEGSKNDEG-----LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDM 365
AD ++N EG L KLG+ +I+ A+ K G PIQ + + GRD+
Sbjct: 91 ADDEDARAAENSEGTDSTDLSFDKLGLPSDILEAVKKVGFETPSPIQARTIPALLDGRDV 150
Query: 366 IGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVE---KEFYDS 536
+G A+TGTGKT AF +PI+ +I K N R P AL LAPTRELA QV +EF D
Sbjct: 151 VGLAQTGTGKTAAFALPIIARIDKSN------RSPQALVLAPTRELALQVADAFQEFADH 204
Query: 537 APNLDTICVNGG 572
++ + + GG
Sbjct: 205 VGGINVLPIYGG 216
[213][TOP]
>UniRef100_B5HXZ0 ATP-dependent RNA helicase n=1 Tax=Streptomyces sviceus ATCC 29083
RepID=B5HXZ0_9ACTO
Length = 504
Score = 84.3 bits (207), Expect = 6e-15
Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 2/110 (1%)
Frame = +3
Query: 258 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIK 437
L + E + +AL +G++ FPIQ A L ++ GRD++GR RTG+GKTLAFG+P++ ++
Sbjct: 84 LDLPERLQAALLAEGVTTPFPIQAATLPNSLAGRDVLGRGRTGSGKTLAFGLPLLARL-- 141
Query: 438 FNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVNGGTPI 581
+ + R PLAL L PTRELA+QV Y A L V GG I
Sbjct: 142 -DGQRAEPRHPLALVLVPTRELAQQVTDALTPYARALRLRAATVVGGMSI 190
[214][TOP]
>UniRef100_B4UZ19 Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1
RepID=B4UZ19_9ACTO
Length = 508
Score = 84.3 bits (207), Expect = 6e-15
Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Frame = +3
Query: 258 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIK 437
L + E+++AL +G+S FPIQ A L ++ GRD++GR RTG+GKTLAFG+ ++ +
Sbjct: 85 LDMPAELLAALGTQGVSVPFPIQGATLPNSLAGRDVLGRGRTGSGKTLAFGLALLARTA- 143
Query: 438 FNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVNGGTPI 581
+ R PLAL L PTRELA+QV Y A L V GG PI
Sbjct: 144 --GQRAEARQPLALILVPTRELAQQVADALTPYARAVKLRLATVVGGMPI 191
[215][TOP]
>UniRef100_A0Q5R7 DEAD-box subfamily ATP-dependent helicase n=2 Tax=Francisella
novicida RepID=A0Q5R7_FRATN
Length = 569
Score = 84.3 bits (207), Expect = 6e-15
Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Frame = +3
Query: 246 EIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMD 425
+ +LG++++IV + K G PIQ+ + + GRD++G+A+TGTGKT AF +P+++
Sbjct: 8 DFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLIN 67
Query: 426 KIIKFNAKHGRGRDPLALALAPTRELAKQVEKE---FYDSAPNLDTICVNGG 572
+ R R P L LAPTRELA QV ++ F + PNLD C+ GG
Sbjct: 68 NM----DLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGG 115
[216][TOP]
>UniRef100_A7YU85 DEAD-box subfamily ATP-dependent helicase n=1 Tax=Francisella
tularensis subsp. holarctica FSC022 RepID=A7YU85_FRATU
Length = 569
Score = 84.3 bits (207), Expect = 6e-15
Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Frame = +3
Query: 246 EIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMD 425
+ +LG++++IV + K G PIQ+ + + GRD++G+A+TGTGKT AF +P+++
Sbjct: 8 DFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLIN 67
Query: 426 KIIKFNAKHGRGRDPLALALAPTRELAKQVEKE---FYDSAPNLDTICVNGG 572
+ R R P L LAPTRELA QV ++ F + PNLD C+ GG
Sbjct: 68 NM----DLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGG 115
[217][TOP]
>UniRef100_A7JLA3 ATP-dependent RNA helicase n=1 Tax=Francisella novicida GA99-3548
RepID=A7JLA3_FRANO
Length = 569
Score = 84.3 bits (207), Expect = 6e-15
Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Frame = +3
Query: 246 EIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMD 425
+ +LG++++IV + K G PIQ+ + + GRD++G+A+TGTGKT AF +P+++
Sbjct: 8 DFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLIN 67
Query: 426 KIIKFNAKHGRGRDPLALALAPTRELAKQVEKE---FYDSAPNLDTICVNGG 572
+ R R P L LAPTRELA QV ++ F + PNLD C+ GG
Sbjct: 68 NM----DLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGG 115
[218][TOP]
>UniRef100_A7JH49 ATP-dependent RNA helicase n=1 Tax=Francisella novicida GA99-3549
RepID=A7JH49_FRANO
Length = 569
Score = 84.3 bits (207), Expect = 6e-15
Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Frame = +3
Query: 246 EIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMD 425
+ +LG++++IV + K G PIQ+ + + GRD++G+A+TGTGKT AF +P+++
Sbjct: 8 DFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLIN 67
Query: 426 KIIKFNAKHGRGRDPLALALAPTRELAKQVEKE---FYDSAPNLDTICVNGG 572
+ R R P L LAPTRELA QV ++ F + PNLD C+ GG
Sbjct: 68 NM----DLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGG 115
[219][TOP]
>UniRef100_Q14GD8 Cold-shock DEAD-box protein A n=4 Tax=Francisella tularensis subsp.
tularensis RepID=Q14GD8_FRAT1
Length = 569
Score = 84.3 bits (207), Expect = 6e-15
Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Frame = +3
Query: 246 EIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMD 425
+ +LG++++IV + K G PIQ+ + + GRD++G+A+TGTGKT AF +P+++
Sbjct: 8 DFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLIN 67
Query: 426 KIIKFNAKHGRGRDPLALALAPTRELAKQVEKE---FYDSAPNLDTICVNGG 572
+ R R P L LAPTRELA QV ++ F + PNLD C+ GG
Sbjct: 68 NM----DLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGG 115
[220][TOP]
>UniRef100_A7NDA1 DEAD/DEAH box helicase domain protein n=4 Tax=Francisella
tularensis subsp. holarctica RepID=A7NDA1_FRATF
Length = 569
Score = 84.3 bits (207), Expect = 6e-15
Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Frame = +3
Query: 246 EIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMD 425
+ +LG++++IV + K G PIQ+ + + GRD++G+A+TGTGKT AF +P+++
Sbjct: 8 DFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLIN 67
Query: 426 KIIKFNAKHGRGRDPLALALAPTRELAKQVEKE---FYDSAPNLDTICVNGG 572
+ R R P L LAPTRELA QV ++ F + PNLD C+ GG
Sbjct: 68 NM----DLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGG 115
[221][TOP]
>UniRef100_A3TGM8 Putative ATP-dependent RNA helicase n=1 Tax=Janibacter sp. HTCC2649
RepID=A3TGM8_9MICO
Length = 540
Score = 84.3 bits (207), Expect = 6e-15
Identities = 53/110 (48%), Positives = 71/110 (64%), Gaps = 7/110 (6%)
Frame = +3
Query: 264 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKII--- 434
I +IVSALA GI+ FPIQ L A+ G D+IG+A+TGTGKTL FGIP+++K+I
Sbjct: 40 IHPDIVSALAAHGITTPFPIQAMTLPVALGGHDIIGQAKTGTGKTLGFGIPLLNKVIARG 99
Query: 435 --KFNAKHGRGRDPLALALAPTRELAKQV--EKEFYDSAPNLDTICVNGG 572
K++ +G+ P ALA+APTRELA QV + E A + + V GG
Sbjct: 100 DDKWDGFVHKGK-PQALAVAPTRELAVQVSADLERAGKARGIRVLTVYGG 148
[222][TOP]
>UniRef100_UPI0001B53A0C DEAD/DEAH box helicase domain protein n=1 Tax=Streptomyces sp. AA4
RepID=UPI0001B53A0C
Length = 575
Score = 84.0 bits (206), Expect = 8e-15
Identities = 46/102 (45%), Positives = 64/102 (62%)
Frame = +3
Query: 255 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKII 434
+LG+ E ++ ALA+ GI FPIQ A + A+ GRD++GRA+TG+GKTLAFG+ I+ ++
Sbjct: 47 QLGLPEPLLRALAEAGIDAPFPIQSATIPDALAGRDVLGRAQTGSGKTLAFGLAILARL- 105
Query: 435 KFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTIC 560
+ R + P AL L PTRELA QV A +L C
Sbjct: 106 --DGGKARPKRPRALVLVPTRELAMQVADSLTPLAKSLGLWC 145
[223][TOP]
>UniRef100_UPI0001B4F9B5 ATP-dependent RNA helicase n=1 Tax=Streptomyces griseoflavus Tu4000
RepID=UPI0001B4F9B5
Length = 451
Score = 84.0 bits (206), Expect = 8e-15
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
Frame = +3
Query: 213 YEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTG 392
+ +GS + GL + E++ L+ G+ + FPIQ A L +++GRD++GR RTG+G
Sbjct: 3 HPDGSASFAGLRLPA-----EVLRTLSALGVREPFPIQAATLPDSLEGRDVLGRGRTGSG 57
Query: 393 KTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVN 566
KTLAFG+P++ + + + PLAL L PTRELA+QV ++ Y A L V
Sbjct: 58 KTLAFGLPLLTRTA---GRRAAPKQPLALVLVPTRELAQQVTQDLAPYAEALRLRMTTVV 114
Query: 567 GGTPI 581
GG I
Sbjct: 115 GGLSI 119
[224][TOP]
>UniRef100_B8HD71 DEAD/DEAH box helicase domain protein n=1 Tax=Arthrobacter
chlorophenolicus A6 RepID=B8HD71_ARTCA
Length = 694
Score = 84.0 bits (206), Expect = 8e-15
Identities = 43/111 (38%), Positives = 66/111 (59%)
Frame = +3
Query: 231 NDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFG 410
++ ++ LGI +++AL G K PIQ A + ++GRD++G A+TGTGKT AF
Sbjct: 46 DENAVKFADLGIDGRVLAALQDVGYEKPSPIQAATIPLLLEGRDVVGLAQTGTGKTAAFA 105
Query: 411 IPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICV 563
+P + ++ + + +G R AL LAPTRELA QV + F A ++D V
Sbjct: 106 VPALSRLAELHDLNGPSRKTQALVLAPTRELALQVAEAFTSYAKHIDDFTV 156
[225][TOP]
>UniRef100_B2SG58 DEAD-box subfamily ATP-dependent helicase n=1 Tax=Francisella
tularensis subsp. mediasiatica FSC147 RepID=B2SG58_FRATM
Length = 569
Score = 84.0 bits (206), Expect = 8e-15
Identities = 44/112 (39%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Frame = +3
Query: 246 EIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMD 425
+ +LG++++I+ + K G PIQ+ + + GRD++G+A+TGTGKT AF +P+++
Sbjct: 8 DFSQLGLNQDIIDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLIN 67
Query: 426 KIIKFNAKHGRGRDPLALALAPTRELAKQVEKE---FYDSAPNLDTICVNGG 572
+ R R P L LAPTRELA QV ++ F + PNLD C+ GG
Sbjct: 68 NM----DLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGG 115
[226][TOP]
>UniRef100_A8MJ90 DEAD/DEAH box helicase domain protein n=1 Tax=Alkaliphilus
oremlandii OhILAs RepID=A8MJ90_ALKOO
Length = 461
Score = 84.0 bits (206), Expect = 8e-15
Identities = 53/114 (46%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Frame = +3
Query: 246 EIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMD 425
E LGI EEIV L +GI + PIQR + A+QG+D+I +A+TGTGKT AF +PI+
Sbjct: 4 EFLNLGIIEEIVEPLRAEGIVEPTPIQRESIPVALQGKDIIAQAQTGTGKTFAFMLPILQ 63
Query: 426 KIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLD--TICVNGGTPI 581
KI K +D AL LAPTRELA Q+ E A LD + V GG +
Sbjct: 64 KINK------NQKDVQALILAPTRELALQITTEAKKIAKGLDVNVLAVYGGQDV 111
[227][TOP]
>UniRef100_Q05XZ3 Putative ATP-dependent RNA helicase n=1 Tax=Synechococcus sp.
RS9916 RepID=Q05XZ3_9SYNE
Length = 599
Score = 84.0 bits (206), Expect = 8e-15
Identities = 47/108 (43%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Frame = +3
Query: 261 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKF 440
G SE +V L +KG + PIQ A M GRD++G+A+TGTGKT AF +P+++++ K
Sbjct: 49 GFSEALVKTLTEKGYKEPSPIQAAAFPELMLGRDLVGQAQTGTGKTAAFALPLLERLQKD 108
Query: 441 NAKHGRGRDPLALALAPTRELAKQVEKEF--YDSA-PNLDTICVNGGT 575
K P AL LAPTRELA QV + F Y + P+L+ + + GG+
Sbjct: 109 ATK------PQALVLAPTRELAMQVAESFKAYSAGHPHLNVLAIYGGS 150
[228][TOP]
>UniRef100_C4E4Z8 DNA/RNA helicase, superfamily II n=1 Tax=Streptosporangium roseum
DSM 43021 RepID=C4E4Z8_STRRS
Length = 561
Score = 84.0 bits (206), Expect = 8e-15
Identities = 45/118 (38%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Frame = +3
Query: 234 DEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGI 413
D+ L + E++ AL+ G + PIQR + P ++GRD++G+A TGTGKT AF +
Sbjct: 7 DDTSSFADLTLRPELLHALSGLGYEEPTPIQREAIPPLLEGRDLLGQAATGTGKTAAFAL 66
Query: 414 PIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLD--TICVNGGTPI 581
P++ ++ + G G +P+AL L PTRELA QV + F+ L + + GG PI
Sbjct: 67 PVLQRM----TRDGGGGEPMALVLVPTRELAVQVSEAFHHYGRELGARVLPIYGGQPI 120
[229][TOP]
>UniRef100_C4CP01 ATP-dependent RNA helicase DbpA n=1 Tax=Sphaerobacter thermophilus
DSM 20745 RepID=C4CP01_9CHLR
Length = 526
Score = 84.0 bits (206), Expect = 8e-15
Identities = 48/110 (43%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Frame = +3
Query: 258 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIK 437
LG+SE ++ A+ G + PIQR + + GRD+I +A+TGTGKT AF +PI++++
Sbjct: 7 LGLSEPVLKAIDAVGFEEPTPIQREAIPLLLSGRDLIAQAQTGTGKTAAFALPIIERL-- 64
Query: 438 FNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDT--ICVNGGTPI 581
GR P AL LAPTRELA QV + F+ DT + V GG PI
Sbjct: 65 ----QPNGRRPQALVLAPTRELAVQVAQTFHQLGRVRDTRVLAVYGGQPI 110
[230][TOP]
>UniRef100_B5JFB6 DEAD/DEAH box helicase domain protein n=1 Tax=Verrucomicrobiae
bacterium DG1235 RepID=B5JFB6_9BACT
Length = 469
Score = 84.0 bits (206), Expect = 8e-15
Identities = 47/110 (42%), Positives = 67/110 (60%), Gaps = 2/110 (1%)
Frame = +3
Query: 258 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIK 437
LG+ EIVSA+ KG ++ PIQ + ++GRD++G A+TGTGKT AF +P++ ++ +
Sbjct: 6 LGLRPEIVSAVTAKGYTEPSPIQAKAIPAILEGRDVLGGAQTGTGKTAAFSLPLLQRLSE 65
Query: 438 FNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLD--TICVNGGTPI 581
K+ R P AL LAPTRELA QV + D +D + C GG I
Sbjct: 66 SEFKNKR---PRALILAPTRELAAQVHQSILDYGKGVDLHSACFFGGVNI 112
[231][TOP]
>UniRef100_C4QME8 DEAD box ATP-dependent RNA helicase, putative n=3 Tax=Schistosoma
mansoni RepID=C4QME8_SCHMA
Length = 1544
Score = 84.0 bits (206), Expect = 8e-15
Identities = 60/157 (38%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Frame = +3
Query: 147 PVPLQFRASLPSLAEFAVADFPYEEGSKND---EGLEIKK-------LGISEEIVSALAK 296
P F +P LA+ + D S + G E K GIS +++ L +
Sbjct: 808 PFRKNFYVEVPELAKMSKEDVKAYRASLENIRVRGRECPKPLRNWVQAGISSRLLACLKR 867
Query: 297 KGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLA 476
K PIQ L M GRDMIG A+TG+GKTLAF +P+M + ++ A G P+A
Sbjct: 868 NNFDKPTPIQCQALPVIMSGRDMIGIAKTGSGKTLAFLVPLM-RHLEHQAPLNPGDGPIA 926
Query: 477 LALAPTRELAKQVEKEFYD--SAPNLDTICVNGGTPI 581
L LAPTRELA Q+ KE A + +CV GGT I
Sbjct: 927 LLLAPTRELALQIFKETKKLCQAADARAVCVYGGTGI 963
[232][TOP]
>UniRef100_UPI0001AF10A1 DEAD-box RNA helicase n=1 Tax=Streptomyces ghanaensis ATCC 14672
RepID=UPI0001AF10A1
Length = 496
Score = 83.6 bits (205), Expect = 1e-14
Identities = 54/146 (36%), Positives = 76/146 (52%), Gaps = 2/146 (1%)
Frame = +3
Query: 150 VPLQFRASLPSLAEFAVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQR 329
+P +LP+ A FA D P E+++AL +G++ FPIQ
Sbjct: 57 LPKTITPALPAAASFADLDMP-------------------TELLAALGSQGVTAPFPIQA 97
Query: 330 AVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAK 509
A L ++ GRD++GR RTG+GKTLAFG+ ++ + A+ G+ PL L L PTRELA+
Sbjct: 98 ATLPNSLAGRDVLGRGRTGSGKTLAFGLALLARTAGQRAEAGQ---PLGLVLVPTRELAQ 154
Query: 510 QVEKEF--YDSAPNLDTICVNGGTPI 581
QV Y + L V GG PI
Sbjct: 155 QVTDALTPYARSVKLRLATVVGGMPI 180
[233][TOP]
>UniRef100_Q46K40 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal n=1
Tax=Prochlorococcus marinus str. NATL2A
RepID=Q46K40_PROMT
Length = 589
Score = 83.6 bits (205), Expect = 1e-14
Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
Frame = +3
Query: 216 EEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGK 395
EE +N E + SEE++ ++ KG S PIQ+A + + GRD++G+A+TGTGK
Sbjct: 28 EEIEQNSEN-GFSEFNFSEELIQTISDKGYSSPTPIQKAAIPELLLGRDLVGQAQTGTGK 86
Query: 396 TLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSA-PNLDTICVN 566
T AF +PI+++ +K N H P L LAPTRELA QV + F Y + P+ + +
Sbjct: 87 TAAFALPILER-LKKNVGH-----PQVLVLAPTRELAMQVAESFRTYSAGHPHFKVLAIY 140
Query: 567 GGT 575
GG+
Sbjct: 141 GGS 143
[234][TOP]
>UniRef100_Q3AX69 DEAD/DEAH box helicase-like n=1 Tax=Synechococcus sp. CC9902
RepID=Q3AX69_SYNS9
Length = 624
Score = 83.6 bits (205), Expect = 1e-14
Identities = 52/139 (37%), Positives = 74/139 (53%), Gaps = 6/139 (4%)
Frame = +3
Query: 177 PSLAEFAVADFPYE---EGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPA 347
PS E + + E + +K++ G SE ++ LA KG S PIQ+A
Sbjct: 46 PSTTEASTTEVTAEVTADEAKSEPQSGFDGFGFSEALLKTLADKGYSDPSPIQKAAFPEL 105
Query: 348 MQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEF 527
M GRD++G+A+TGTGKT AF +P+++++ + P L LAPTRELA QV F
Sbjct: 106 MLGRDLVGQAQTGTGKTAAFALPLLERL------ESGQKTPQVLVLAPTRELAMQVADSF 159
Query: 528 YDSA---PNLDTICVNGGT 575
A P+L + V GGT
Sbjct: 160 KAYAAGHPHLKVLAVYGGT 178
[235][TOP]
>UniRef100_B8D278 DEAD/DEAH box helicase domain protein n=1 Tax=Halothermothrix
orenii H 168 RepID=B8D278_HALOH
Length = 527
Score = 83.6 bits (205), Expect = 1e-14
Identities = 49/116 (42%), Positives = 70/116 (60%), Gaps = 3/116 (2%)
Frame = +3
Query: 243 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 422
++ +L IS+EI+ A+ G + PIQ + P + G+D+IG+A+TGTGKT AFGIP++
Sbjct: 4 VKFSELNISKEILKAVEDMGFEETTPIQTKAIPPILNGKDIIGQAQTGTGKTAAFGIPLL 63
Query: 423 DKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAP---NLDTICVNGGTPI 581
+KI R + P A+ L PTRELA QV +E A +L T+ V GG I
Sbjct: 64 EKI------DTRNKKPQAIILCPTRELAIQVAEELKRLAKYKRSLYTLPVYGGQSI 113
[236][TOP]
>UniRef100_A2C8A6 Putative ATP-dependent RNA helicase n=1 Tax=Prochlorococcus marinus
str. MIT 9303 RepID=A2C8A6_PROM3
Length = 636
Score = 83.6 bits (205), Expect = 1e-14
Identities = 47/112 (41%), Positives = 65/112 (58%), Gaps = 3/112 (2%)
Frame = +3
Query: 246 EIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMD 425
E G SE ++ LA+KG + PIQ+A + M GRD++G+A+TGTGKT AF +P+++
Sbjct: 84 EFDCFGFSEPLLKTLAEKGYKQPSPIQKAAIPELMLGRDLVGQAQTGTGKTAAFALPLIE 143
Query: 426 KIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSA---PNLDTICVNGG 572
++ G P L LAPTRELA QV F A P+L + V GG
Sbjct: 144 RL------QDHGSRPQVLVLAPTRELAMQVADSFRAYAVGHPHLKVLAVYGG 189
[237][TOP]
>UniRef100_C9N7I5 DEAD/DEAH box helicase domain protein n=1 Tax=Streptomyces
flavogriseus ATCC 33331 RepID=C9N7I5_9ACTO
Length = 726
Score = 83.6 bits (205), Expect = 1e-14
Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Frame = +3
Query: 183 LAEFAVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRD 362
+A+ + AD E + + LG+ E +V LA+ G++ FPIQ A + A+ G+D
Sbjct: 27 VADTSAADTAEEAAEDAEPSVTFADLGLPEGVVRKLAQNGVTTPFPIQAATIPDALAGKD 86
Query: 363 MIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDS 536
++GR RTG+GKTL+FG+P + + H + P A+ L PTRELA QV Y
Sbjct: 87 ILGRGRTGSGKTLSFGLPTLAALA---GGHTEKKKPRAIILTPTRELAMQVADALQPYGD 143
Query: 537 APNLDTICVNGGT 575
L V GGT
Sbjct: 144 VLGLKMKVVCGGT 156
[238][TOP]
>UniRef100_C2LXJ1 Cold-shock DEAD box protein A n=1 Tax=Staphylococcus hominis SK119
RepID=C2LXJ1_STAHO
Length = 503
Score = 83.6 bits (205), Expect = 1e-14
Identities = 47/112 (41%), Positives = 71/112 (63%), Gaps = 2/112 (1%)
Frame = +3
Query: 252 KKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKI 431
K+LGIS++ V L + G + PIQ+ + ++G+D++G+A+TGTGKT AFGIP+++K+
Sbjct: 5 KELGISDKTVKTLEEMGFKEPTPIQKESIPYTLEGKDILGQAQTGTGKTGAFGIPLIEKV 64
Query: 432 IKFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVNGGTPI 581
+ K G AL LAPTRELA QV ++ + N+ + V GG PI
Sbjct: 65 V---GKSG----VQALILAPTRELAMQVAEQLREFSRGQNIQVVTVFGGMPI 109
[239][TOP]
>UniRef100_A4U061 ATP-dependent RNA helicase, DEAD-family (DeaD) n=1
Tax=Magnetospirillum gryphiswaldense RepID=A4U061_9PROT
Length = 583
Score = 83.6 bits (205), Expect = 1e-14
Identities = 44/104 (42%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Frame = +3
Query: 276 IVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHG 455
+ AL+++ + L +Q AVL+PA +GRD++ A+TG+GKT+AFG+ I D ++ G
Sbjct: 10 LTQALSQRNYTDLTSVQNAVLDPAARGRDLLVSAQTGSGKTVAFGLAIADTLLGDALAFG 69
Query: 456 RGRDPLALALAPTRELAKQVEKE---FYDSAPNLDTICVNGGTP 578
+ +PLAL +APTRELA QV++E Y A CV G P
Sbjct: 70 QASEPLALIVAPTRELALQVQRELTWLYQQAGGQVVACVGGMDP 113
[240][TOP]
>UniRef100_A3Z808 Putative ATP-dependent RNA helicase n=1 Tax=Synechococcus sp.
RS9917 RepID=A3Z808_9SYNE
Length = 603
Score = 83.6 bits (205), Expect = 1e-14
Identities = 46/108 (42%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Frame = +3
Query: 261 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKF 440
G SE ++ LA KG PIQRA M GRD++G+A+TGTGKT AF +P+++++
Sbjct: 49 GFSEALLRTLASKGYQAPSPIQRAAFPELMLGRDLVGQAQTGTGKTAAFALPLLERL--- 105
Query: 441 NAKHGRGRDPLALALAPTRELAKQVEKEFYDSA---PNLDTICVNGGT 575
G P L LAPTRELA QV + F A P+L+ + + GG+
Sbjct: 106 ---QPEGPGPQVLVLAPTRELAMQVAESFKAYAAGHPHLNVLAIYGGS 150
[241][TOP]
>UniRef100_C5YMA3 Putative uncharacterized protein Sb07g022960 n=1 Tax=Sorghum
bicolor RepID=C5YMA3_SORBI
Length = 632
Score = 83.6 bits (205), Expect = 1e-14
Identities = 43/107 (40%), Positives = 73/107 (68%), Gaps = 4/107 (3%)
Frame = +3
Query: 216 EEGSKNDEGLEIK--KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGT 389
+EG + +E +E+ +LG+ E++ AL KKGI+K PIQR + ++G+D++ +A+TG+
Sbjct: 29 DEGKEEEEEVEVSFDELGLDEQLKRALRKKGIAKATPIQREAIPLILEGKDVVAKAKTGS 88
Query: 390 GKTLAFGIPIMDKIIKFNAKHGRGRDPL--ALALAPTRELAKQVEKE 524
GKT A+ +P++ +++K +++ GR R P A L PTREL +QV E
Sbjct: 89 GKTFAYLLPLLHELLKLSSE-GRIRKPAPNAFILVPTRELCQQVYNE 134
[242][TOP]
>UniRef100_B9TPP2 Dead box ATP-dependent RNA helicase, putative (Fragment) n=1
Tax=Ricinus communis RepID=B9TPP2_RICCO
Length = 151
Score = 83.6 bits (205), Expect = 1e-14
Identities = 43/106 (40%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Frame = +3
Query: 261 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKF 440
G+ I AL+K+G + L P+Q+A+L+PA+ D + A+TG+GKT+AFG+ + +++
Sbjct: 6 GVVPAIAKALSKRGYTTLTPVQQAMLDPALAASDALVSAQTGSGKTVAFGLALAPTLLED 65
Query: 441 NAKHGRGRDPLALALAPTRELAKQVEKE---FYDSAPNLDTICVNG 569
N + +PLAL +APTRELA QV++E Y+ L CV G
Sbjct: 66 NDRFEPAAEPLALVIAPTRELALQVKRELEWLYEMTGALIVSCVGG 111
[243][TOP]
>UniRef100_Q5BCI0 ATP-dependent RNA helicase mak5 n=2 Tax=Emericella nidulans
RepID=MAK5_EMENI
Length = 770
Score = 83.6 bits (205), Expect = 1e-14
Identities = 48/135 (35%), Positives = 82/135 (60%), Gaps = 14/135 (10%)
Frame = +3
Query: 219 EGSKNDEGLEI---KKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGT 389
E +D+G +I + LG+S E +++L+K S +Q++ + P + G D+IG+A TG+
Sbjct: 186 EDEADDDGADISAWEPLGLSPETLTSLSKLKFSTPTSVQKSCIPPILDGHDVIGKASTGS 245
Query: 390 GKTLAFGIPIMDKIIK------FNAKHGRGRDPLALALAPTRELAKQVEKEFY---DSAP 542
GKTLAFG+PI++ ++ +++ + + P+AL L+PTRELA Q++K Y +AP
Sbjct: 246 GKTLAFGLPILEHYLERERRKTIDSEEEKEKIPIALILSPTRELAHQLQKHIYGLISNAP 305
Query: 543 --NLDTICVNGGTPI 581
N T + GG +
Sbjct: 306 GVNARTALLTGGLSV 320
[244][TOP]
>UniRef100_UPI0001B5063C ATP-dependent RNA helicase n=1 Tax=Streptomyces viridochromogenes
DSM 40736 RepID=UPI0001B5063C
Length = 482
Score = 83.2 bits (204), Expect = 1e-14
Identities = 41/86 (47%), Positives = 59/86 (68%)
Frame = +3
Query: 258 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIK 437
LG+ E +++AL +G++ FPIQ A L ++ GRD++GR RTG+GKTLAFG+ ++ +
Sbjct: 68 LGLPERLLTALGAEGVTTPFPIQAATLPNSLAGRDVLGRGRTGSGKTLAFGLALLARTA- 126
Query: 438 FNAKHGRGRDPLALALAPTRELAKQV 515
+ R PLAL L PTRELA+QV
Sbjct: 127 --GQRAESRQPLALVLVPTRELAQQV 150
[245][TOP]
>UniRef100_UPI0001AF215D putative DEAD-box RNA helicase n=1 Tax=Streptomyces roseosporus
NRRL 11379 RepID=UPI0001AF215D
Length = 539
Score = 83.2 bits (204), Expect = 1e-14
Identities = 58/162 (35%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Frame = +3
Query: 102 RQLPVVARARHFHSNPVPLQFRASLPSLAEFAVADFPYEEGSKNDEGLEIKKLGISEEIV 281
R+ P VA F +P +LPS+ FA D P ++
Sbjct: 57 RRKPAVAAPAEF---ALPETVTPALPSVDAFADLDMP-------------------AALL 94
Query: 282 SALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRG 461
LA +G+++ FPIQ A L ++ GRD++GR RTG+GKTLAFG+ ++ + +
Sbjct: 95 KTLAAQGVTEPFPIQGATLPNSLAGRDILGRGRTGSGKTLAFGLALLARTA---GRRSEP 151
Query: 462 RDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVNGGTPI 581
R PLA+ L PTRELA+QV Y +A NL V GG I
Sbjct: 152 RAPLAMVLVPTRELAQQVTDALTPYATAVNLRLATVVGGMSI 193
[246][TOP]
>UniRef100_UPI000194D218 PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 n=1
Tax=Taeniopygia guttata RepID=UPI000194D218
Length = 1031
Score = 83.2 bits (204), Expect = 1e-14
Identities = 48/109 (44%), Positives = 65/109 (59%), Gaps = 2/109 (1%)
Frame = +3
Query: 261 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKF 440
GIS +I++AL K G K PIQ + M GRD+IG A+TG+GKT+AF +P+ I+
Sbjct: 378 GISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 437
Query: 441 NAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVNGGTPI 581
A G P+A+ + PTRELA Q+ KE + L +CV GGT I
Sbjct: 438 RALE-EGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGI 485
[247][TOP]
>UniRef100_UPI0000E80F5F PREDICTED: similar to Prp5-like DEAD-box protein n=1 Tax=Gallus
gallus RepID=UPI0000E80F5F
Length = 1043
Score = 83.2 bits (204), Expect = 1e-14
Identities = 48/109 (44%), Positives = 65/109 (59%), Gaps = 2/109 (1%)
Frame = +3
Query: 261 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKF 440
GIS +I++AL K G K PIQ + M GRD+IG A+TG+GKT+AF +P+ I+
Sbjct: 382 GISMKILTALKKHGYEKPTPIQSQAIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 441
Query: 441 NAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVNGGTPI 581
A G P+A+ + PTRELA Q+ KE + L +CV GGT I
Sbjct: 442 RALE-EGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGI 489
[248][TOP]
>UniRef100_UPI0000ECAC50 Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-) (DEAD box
protein 46) (PRP5 homolog). n=1 Tax=Gallus gallus
RepID=UPI0000ECAC50
Length = 1031
Score = 83.2 bits (204), Expect = 1e-14
Identities = 48/109 (44%), Positives = 65/109 (59%), Gaps = 2/109 (1%)
Frame = +3
Query: 261 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIKF 440
GIS +I++AL K G K PIQ + M GRD+IG A+TG+GKT+AF +P+ I+
Sbjct: 377 GISMKILTALKKHGYEKPTPIQSQAIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 436
Query: 441 NAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVNGGTPI 581
A G P+A+ + PTRELA Q+ KE + L +CV GGT I
Sbjct: 437 RALE-EGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGI 484
[249][TOP]
>UniRef100_A2BRT0 Putative ATP-dependent RNA helicase n=1 Tax=Prochlorococcus marinus
str. AS9601 RepID=A2BRT0_PROMS
Length = 593
Score = 83.2 bits (204), Expect = 1e-14
Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 6/154 (3%)
Frame = +3
Query: 132 HFHSNPVPLQFRASLPSLAEFAVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISK 311
+FH+ PL +L + E + E +ND G ++ I+++L KG
Sbjct: 16 NFHNEDSPLLESKNLENKKE--IESQLLEVSKENDNENGFLDFGFNQSILNSLINKGYKN 73
Query: 312 LFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKII---KFNAKHGRGRDPLALA 482
PIQ+A + M GRD++G+A+TGTGKT AF +P+++K+ + NAK L
Sbjct: 74 PTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEKLTDNKELNAK--------VLV 125
Query: 483 LAPTRELAKQVEKEF--YDS-APNLDTICVNGGT 575
+ PTRELA QV + F Y S + N T+ + GGT
Sbjct: 126 MTPTRELATQVAESFKSYSSESSNFKTVAIYGGT 159
[250][TOP]
>UniRef100_C8T156 ATP-dependent RNA helicase RhlE n=2 Tax=Klebsiella pneumoniae
RepID=C8T156_KLEPR
Length = 519
Score = 83.2 bits (204), Expect = 1e-14
Identities = 51/140 (36%), Positives = 82/140 (58%), Gaps = 4/140 (2%)
Frame = +3
Query: 174 LPSL-AEFAVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAM 350
LPSL A ++ P+ + + LG++ +I+ A+A++G + PIQ+ + +
Sbjct: 45 LPSLIAIISLKTTPFTGPGRFGVVMSFDSLGLNPDILRAVAEQGYVEPTPIQQQAIPAVL 104
Query: 351 QGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRDPL-ALALAPTRELAKQVEKEF 527
QGRD++ A+TGTGKT F +P++ ++I+ N H +GR P+ AL L PTRELA QV +
Sbjct: 105 QGRDLMASAQTGTGKTAGFTLPLLQRLIQ-NEPHAKGRRPVRALILTPTRELAAQVGENV 163
Query: 528 --YDSAPNLDTICVNGGTPI 581
Y N+ ++ V GG I
Sbjct: 164 RDYSKYLNIRSLVVFGGVSI 183