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[1][TOP]
>UniRef100_Q9BBS7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Lotus japonicus
RepID=RPOC2_LOTJA
Length = 1332
Score = 122 bits (307), Expect = 1e-26
Identities = 62/62 (100%), Positives = 62/62 (100%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKIIRG 150
ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKIIRG
Sbjct: 1271 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKIIRG 1330
Query: 149 RN 144
RN
Sbjct: 1331 RN 1332
[2][TOP]
>UniRef100_B8R492 DNA-directed RNA polymerase n=1 Tax=Trifolium subterraneum
RepID=B8R492_TRISU
Length = 1349
Score = 91.7 bits (226), Expect(2) = 4e-20
Identities = 45/57 (78%), Positives = 52/57 (91%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKI 159
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK+I DRS ARQ+ +ITL+ K+
Sbjct: 1276 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMDRSRARQEKRITLKKKKL 1332
Score = 30.0 bits (66), Expect(2) = 4e-20
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -3
Query: 184 RLPWKQ*KLFEVEIRDISFYHR 119
R+ K+ KLFEVEIR++ F+HR
Sbjct: 1324 RITLKKKKLFEVEIRNLLFHHR 1345
[3][TOP]
>UniRef100_UPI00017E10C5 RNA polymerase beta'''' subunit n=1 Tax=Medicago truncatula
RepID=UPI00017E10C5
Length = 1374
Score = 87.4 bits (215), Expect(2) = 1e-18
Identities = 44/57 (77%), Positives = 50/57 (87%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKI 159
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK+I RS +RQ KITL+ K+
Sbjct: 1296 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQYNKITLKKKKL 1352
Score = 28.9 bits (63), Expect(2) = 1e-18
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = -3
Query: 184 RLPWKQ*KLFEVEIRDISFYHR 119
++ K+ KLFEVEIR++ F+HR
Sbjct: 1344 KITLKKKKLFEVEIRNLLFHHR 1365
[4][TOP]
>UniRef100_B5LMM6 DNA-directed RNA polymerase n=1 Tax=Cicer arietinum
RepID=B5LMM6_CICAR
Length = 1376
Score = 88.6 bits (218), Expect(2) = 2e-18
Identities = 45/56 (80%), Positives = 49/56 (87%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGFK+I RS +RQ KITL+ K
Sbjct: 1294 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKRIMHRSRSRQHNKITLKKKK 1349
Score = 27.3 bits (59), Expect(2) = 2e-18
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -3
Query: 172 KQ*KLFEVEIRDISFYHR*R*LFFFSFKK 86
K+ KLFEVEIR++ +HR + F+ FK+
Sbjct: 1347 KKKKLFEVEIRNLLLHHR-KLFDFYHFKQ 1374
[5][TOP]
>UniRef100_P12227 DNA-directed RNA polymerase subunit beta'' (Fragment) n=1 Tax=Pisum
sativum RepID=RPOC2_PEA
Length = 1163
Score = 85.1 bits (209), Expect(2) = 5e-18
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKIT 177
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK+I RS +RQ KIT
Sbjct: 1083 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKIT 1133
Score = 29.3 bits (64), Expect(2) = 5e-18
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = -3
Query: 163 KLFEVEIRDISFYHR*R*LFFFSFKK 86
KLFEVEIR++ F+HR + L F +FK+
Sbjct: 1137 KLFEVEIRNLLFHHR-KLLDFANFKE 1161
[6][TOP]
>UniRef100_A9XW75 DNA-directed RNA polymerase n=1 Tax=Ficus sp. Moore 315
RepID=A9XW75_9ROSA
Length = 1391
Score = 82.4 bits (202), Expect(2) = 9e-17
Identities = 44/56 (78%), Positives = 48/56 (85%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK + RS RQ T I+LET K
Sbjct: 1297 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS--RQHTNISLETKK 1350
Score = 27.7 bits (60), Expect(2) = 9e-17
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -3
Query: 181 LPWKQ*KLFEVEIRDISFYHR 119
L K+ LFE EIRDI F+HR
Sbjct: 1346 LETKKKNLFECEIRDILFHHR 1366
[7][TOP]
>UniRef100_Q8HVY3 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Glycine max
RepID=RPOC2_SOYBN
Length = 1386
Score = 88.2 bits (217), Expect = 3e-16
Identities = 53/93 (56%), Positives = 62/93 (66%), Gaps = 8/93 (8%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK--II 156
ARVL+KAALRGRIDWLKGLKEN+VLGG+IPVGTGFK+I +RS RQ K+T ET K +
Sbjct: 1296 ARVLSKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRIMNRSKQRQYNKMTSETKKKNLF 1355
Query: 155 RGR------N*RYFVLP*IKIIILFFI*KNLCD 75
G + R F FF+ KNLCD
Sbjct: 1356 EGEMRDILFHHREF---------FFFVSKNLCD 1379
[8][TOP]
>UniRef100_A9XW40 DNA-directed RNA polymerase n=1 Tax=Berberidopsis corallina
RepID=A9XW40_9MAGN
Length = 1389
Score = 79.7 bits (195), Expect(2) = 2e-15
Identities = 43/56 (76%), Positives = 46/56 (82%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK + RS RQ I LET K
Sbjct: 1293 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS--RQHNNILLETKK 1346
Score = 25.8 bits (55), Expect(2) = 2e-15
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 181 LPWKQ*KLFEVEIRDISFYHR 119
L K+ LFE E+RDI F+HR
Sbjct: 1342 LETKKKNLFEGEMRDILFHHR 1362
[9][TOP]
>UniRef100_Q9THV5 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Sinapis alba
RepID=RPOC2_SINAL
Length = 1384
Score = 85.1 bits (209), Expect = 2e-15
Identities = 48/83 (57%), Positives = 58/83 (69%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKIIRG 150
ARVLAKAALRGRIDWLKGLKEN+VLGG+IP G G ++IG S+A +IRG
Sbjct: 1297 ARVLAKAALRGRIDWLKGLKENVVLGGVIPPGPGSQRIGALSTATYQHSFGKNKNYLIRG 1356
Query: 149 RN*RYFVLP*IKIIILFFI*KNL 81
R RYF+LP I+ LF+ +NL
Sbjct: 1357 RYERYFILP-QGILCLFYQIQNL 1378
[10][TOP]
>UniRef100_A6MM26 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Buxus microphylla
RepID=RPOC2_BUXMI
Length = 1391
Score = 80.1 bits (196), Expect(2) = 3e-15
Identities = 43/56 (76%), Positives = 46/56 (82%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK + RS RQ I LET K
Sbjct: 1295 ARVLAKAALRGRIDWLKGLKENVVLGGLIPVGTGFKVLVHRS--RQHNNIPLETKK 1348
Score = 25.0 bits (53), Expect(2) = 3e-15
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 181 LPWKQ*KLFEVEIRDISFYHR 119
L K+ +FE E+RDI F+HR
Sbjct: 1344 LETKKKNIFEGEMRDILFHHR 1364
[11][TOP]
>UniRef100_A4GGA7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Phaseolus vulgaris
RepID=RPOC2_PHAVU
Length = 1366
Score = 84.7 bits (208), Expect = 3e-15
Identities = 44/58 (75%), Positives = 49/58 (84%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKII 156
ARVL+KAALRGRIDWLKGLKEN+VLGG++PVGTGFK+I RS RQ KIT ET K I
Sbjct: 1296 ARVLSKAALRGRIDWLKGLKENVVLGGMMPVGTGFKRIIYRSKQRQYNKITSETKKRI 1353
[12][TOP]
>UniRef100_Q4VZP3 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Cucumis sativus
RepID=RPOC2_CUCSA
Length = 1394
Score = 79.0 bits (193), Expect(2) = 5e-15
Identities = 40/54 (74%), Positives = 46/54 (85%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLET 168
ARVLAKAALRGRIDWL+GLKEN+VLGG+IPVGTGF+++ RS RQ I LET
Sbjct: 1300 ARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRS--RQHNNIPLET 1351
Score = 25.4 bits (54), Expect(2) = 5e-15
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 163 KLFEVEIRDISFYHR*R*LFFFS 95
K+FE E+RDI F+H+ FF S
Sbjct: 1355 KIFEGEMRDILFHHKELFDFFIS 1377
[13][TOP]
>UniRef100_A4GYP8 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Populus
trichocarpa RepID=RPOC2_POPTR
Length = 1390
Score = 76.6 bits (187), Expect(2) = 5e-15
Identities = 37/43 (86%), Positives = 40/43 (93%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSS 201
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK + RSS
Sbjct: 1296 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLAHRSS 1338
Score = 27.7 bits (60), Expect(2) = 5e-15
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 202 AQDKIPRLPWKQ*KLFEVEIRDISFYHR 119
+Q KI K+ LFE E+RDI F+HR
Sbjct: 1338 SQHKIIPFKTKKKNLFEGEMRDILFHHR 1365
[14][TOP]
>UniRef100_Q09X27 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Morus indica
RepID=RPOC2_MORIN
Length = 1389
Score = 78.6 bits (192), Expect(2) = 6e-15
Identities = 42/56 (75%), Positives = 46/56 (82%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK + RS +Q I LET K
Sbjct: 1295 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS--KQHNNIPLETKK 1348
Score = 25.4 bits (54), Expect(2) = 6e-15
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 181 LPWKQ*KLFEVEIRDISFYHR 119
L K+ LFE E+RDI F+H+
Sbjct: 1344 LETKKKNLFECEMRDILFHHK 1364
[15][TOP]
>UniRef100_A9XW93 DNA-directed RNA polymerase n=1 Tax=Liquidambar styraciflua
RepID=A9XW93_LIQST
Length = 1390
Score = 77.8 bits (190), Expect(2) = 8e-15
Identities = 42/56 (75%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK + S RQ I LET K
Sbjct: 1296 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHHS--RQHNNIPLETKK 1349
Score = 25.8 bits (55), Expect(2) = 8e-15
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 181 LPWKQ*KLFEVEIRDISFYHR 119
L K+ LFE E+RDI F+HR
Sbjct: 1345 LETKKKNLFEGEMRDILFHHR 1365
[16][TOP]
>UniRef100_Q4FFY5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Yucca schidigera
RepID=Q4FFY5_9ASPA
Length = 1384
Score = 83.2 bits (204), Expect = 8e-15
Identities = 45/56 (80%), Positives = 47/56 (83%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGFKK+ RS RQD I LE K
Sbjct: 1290 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHRS--RQDKNIHLEIKK 1343
[17][TOP]
>UniRef100_Q0G9X2 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Daucus carota
RepID=RPOC2_DAUCA
Length = 1390
Score = 78.6 bits (192), Expect(2) = 1e-14
Identities = 41/54 (75%), Positives = 47/54 (87%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLET 168
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGF+ G S+RQ T ++LET
Sbjct: 1294 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFE--GLVHSSRQHTNLSLET 1345
Score = 24.6 bits (52), Expect(2) = 1e-14
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 181 LPWKQ*KLFEVEIRDISFYHR 119
L K +FE E+RDI F+HR
Sbjct: 1343 LETKNNNIFEGEMRDILFHHR 1363
[18][TOP]
>UniRef100_A9QBM2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Musa acuminata
RepID=A9QBM2_MUSAC
Length = 1359
Score = 82.8 bits (203), Expect = 1e-14
Identities = 44/53 (83%), Positives = 46/53 (86%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLE 171
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGFKK+ RS RQD I LE
Sbjct: 1285 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHRS--RQDKNIYLE 1335
[19][TOP]
>UniRef100_A0A325 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Coffea arabica
RepID=RPOC2_COFAR
Length = 1391
Score = 76.3 bits (186), Expect(2) = 1e-14
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK G ++Q K LET K
Sbjct: 1297 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK--GLVKPSKQHNKALLETKK 1350
Score = 26.6 bits (57), Expect(2) = 1e-14
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -3
Query: 181 LPWKQ*KLFEVEIRDISFYHR*R*LFFFSF 92
L K+ LFE E+RDI F+HR FF SF
Sbjct: 1346 LETKKKNLFEGEMRDILFHHR---NFFDSF 1372
[20][TOP]
>UniRef100_Q0G9M9 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Liriodendron
tulipifera RepID=RPOC2_LIRTU
Length = 1382
Score = 77.4 bits (189), Expect(2) = 1e-14
Identities = 42/56 (75%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK + RS RQ I LE K
Sbjct: 1288 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS--RQHNNIPLEIKK 1341
Score = 25.4 bits (54), Expect(2) = 1e-14
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 172 KQ*KLFEVEIRDISFYHR 119
K+ LFE E+RDI F+HR
Sbjct: 1340 KKKNLFEGEMRDILFHHR 1357
[21][TOP]
>UniRef100_B5AGZ9 DNA-directed RNA polymerase n=1 Tax=Gonystylus bancanus
RepID=B5AGZ9_9ROSI
Length = 1370
Score = 82.4 bits (202), Expect = 1e-14
Identities = 45/69 (65%), Positives = 50/69 (72%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKIIRG 150
ARVLAKAALRGRIDW+KGLKEN+VLG +IP GTGFK G +RQ I ET KI G
Sbjct: 1300 ARVLAKAALRGRIDWMKGLKENVVLGSMIPAGTGFK--GLVPCSRQHNNILFETKKISSG 1357
Query: 149 RN*RYFVLP 123
N RYF+ P
Sbjct: 1358 GNERYFLPP 1366
[22][TOP]
>UniRef100_A9XWC5 DNA-directed RNA polymerase n=2 Tax=Trochodendron aralioides
RepID=A9XWC5_TROAR
Length = 1381
Score = 77.8 bits (190), Expect(2) = 2e-14
Identities = 42/56 (75%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK G +RQ I LET K
Sbjct: 1295 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK--GLMHHSRQHNNIPLETEK 1348
Score = 24.6 bits (52), Expect(2) = 2e-14
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 160 LFEVEIRDISFYHR 119
LFE E+RDI F+HR
Sbjct: 1351 LFEGEMRDILFHHR 1364
[23][TOP]
>UniRef100_A6MMB2 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Chloranthus
spicatus RepID=RPOC2_CHLSC
Length = 1389
Score = 76.6 bits (187), Expect(2) = 2e-14
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKIIRG 150
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK + RS ++ + ++ + G
Sbjct: 1293 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRSRQHNNSPLEIKKKNLFEG 1352
Score = 25.4 bits (54), Expect(2) = 2e-14
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 172 KQ*KLFEVEIRDISFYHR 119
K+ LFE E+RDI F+HR
Sbjct: 1345 KKKNLFEGEMRDILFHHR 1362
[24][TOP]
>UniRef100_B1A925 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Carica papaya
RepID=RPOC2_CARPA
Length = 1387
Score = 77.4 bits (189), Expect(2) = 2e-14
Identities = 42/56 (75%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IP GTGFK G +RQ T I LET K
Sbjct: 1291 ARVLAKAALRGRIDWLKGLKENVVLGGMIPAGTGFK--GLVHCSRQHTSILLETKK 1344
Score = 24.6 bits (52), Expect(2) = 2e-14
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 160 LFEVEIRDISFYHR 119
LFE E+RDI F+HR
Sbjct: 1349 LFEGEMRDIFFHHR 1362
[25][TOP]
>UniRef100_Q14FG7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Populus alba
RepID=RPOC2_POPAL
Length = 1390
Score = 76.6 bits (187), Expect(2) = 3e-14
Identities = 37/43 (86%), Positives = 40/43 (93%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSS 201
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK + RSS
Sbjct: 1296 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLAHRSS 1338
Score = 25.0 bits (53), Expect(2) = 3e-14
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 202 AQDKIPRLPWKQ*KLFEVEIRDISFYHR 119
+Q KI K+ LF E+RDI F+HR
Sbjct: 1338 SQHKIIPFKIKKKNLFAGEMRDILFHHR 1365
[26][TOP]
>UniRef100_A4QJS3 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Olimarabidopsis
pumila RepID=RPOC2_OLIPU
Length = 1379
Score = 75.9 bits (185), Expect(2) = 3e-14
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLE 171
ARVLAKAALRGRIDWLKGLKEN+VLGG+IP GTGF K G +RQ T I LE
Sbjct: 1292 ARVLAKAALRGRIDWLKGLKENVVLGGVIPAGTGFNK-GLVHCSRQHTNILLE 1343
Score = 25.8 bits (55), Expect(2) = 3e-14
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 172 KQ*KLFEVEIRDISFYHR 119
K LFE ++RDI FYHR
Sbjct: 1347 KNLSLFEGDMRDILFYHR 1364
[27][TOP]
>UniRef100_A4QLS3 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Nasturtium
officinale RepID=RPOC2_NASOF
Length = 1379
Score = 75.9 bits (185), Expect(2) = 3e-14
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLE 171
ARVLAKAALRGRIDWLKGLKEN+VLGG+IP GTGF K G +RQ T I LE
Sbjct: 1292 ARVLAKAALRGRIDWLKGLKENVVLGGVIPAGTGFNK-GLVHCSRQHTNILLE 1343
Score = 25.8 bits (55), Expect(2) = 3e-14
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 172 KQ*KLFEVEIRDISFYHR 119
K LFE ++RDI FYHR
Sbjct: 1347 KNLSLFERDMRDILFYHR 1364
[28][TOP]
>UniRef100_A4QKS1 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Crucihimalaya
wallichii RepID=RPOC2_CRUWA
Length = 1379
Score = 75.9 bits (185), Expect(2) = 3e-14
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLE 171
ARVLAKAALRGRIDWLKGLKEN+VLGG+IP GTGF K G +RQ T I LE
Sbjct: 1292 ARVLAKAALRGRIDWLKGLKENVVLGGVIPAGTGFNK-GLVHCSRQHTNILLE 1343
Score = 25.8 bits (55), Expect(2) = 3e-14
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 172 KQ*KLFEVEIRDISFYHR 119
K LFE ++RDI FYHR
Sbjct: 1347 KNFSLFEGDMRDILFYHR 1364
[29][TOP]
>UniRef100_Q09FX1 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Nandina domestica
RepID=RPOC2_NANDO
Length = 1377
Score = 79.7 bits (195), Expect(2) = 3e-14
Identities = 38/60 (63%), Positives = 46/60 (76%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKIIRG 150
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK + RSS + + ++ + G
Sbjct: 1283 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRSSQHSNISLEIQNTNLFEG 1342
Score = 21.9 bits (45), Expect(2) = 3e-14
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 160 LFEVEIRDISFYHR 119
LFE +RDI F+HR
Sbjct: 1339 LFEGGMRDILFHHR 1352
[30][TOP]
>UniRef100_A4QL96 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Lepidium
virginicum RepID=RPOC2_LEPVR
Length = 1373
Score = 75.9 bits (185), Expect(2) = 3e-14
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLE 171
ARVLAKAALRGRIDWLKGLKEN+VLGG+IP GTGF K G +RQ T I LE
Sbjct: 1292 ARVLAKAALRGRIDWLKGLKENVVLGGVIPAGTGFNK-GLVHCSRQHTNILLE 1343
Score = 25.8 bits (55), Expect(2) = 3e-14
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 172 KQ*KLFEVEIRDISFYHR 119
K LFE ++RDI FYHR
Sbjct: 1347 KNLSLFEGDMRDILFYHR 1364
[31][TOP]
>UniRef100_A4QKI2 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Capsella
bursa-pastoris RepID=RPOC2_CAPBU
Length = 1379
Score = 75.9 bits (185), Expect(2) = 4e-14
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLE 171
ARVLAKAALRGRIDWLKGLKEN+VLGG+IP GTGF K G +RQ T I LE
Sbjct: 1292 ARVLAKAALRGRIDWLKGLKENVVLGGVIPAGTGFNK-GLVHCSRQHTNILLE 1343
Score = 25.4 bits (54), Expect(2) = 4e-14
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 160 LFEVEIRDISFYHR 119
LFE ++RDI FYHR
Sbjct: 1351 LFEGDMRDILFYHR 1364
[32][TOP]
>UniRef100_Q7YJY0 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Calycanthus
floridus var. glaucus RepID=RPOC2_CALFG
Length = 1377
Score = 75.9 bits (185), Expect(2) = 4e-14
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG++PVGTGFK + RS RQ I LE K
Sbjct: 1292 ARVLAKAALRGRIDWLKGLKENVVLGGMMPVGTGFKGLVRRS--RQHNNIPLEIKK 1345
Score = 25.4 bits (54), Expect(2) = 4e-14
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 172 KQ*KLFEVEIRDISFYHR 119
K+ LFE E+RDI F+HR
Sbjct: 1344 KKKNLFEGEMRDILFHHR 1361
[33][TOP]
>UniRef100_P56764 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Arabidopsis
thaliana RepID=RPOC2_ARATH
Length = 1376
Score = 75.9 bits (185), Expect(2) = 4e-14
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLE 171
ARVLAKAALRGRIDWLKGLKEN+VLGG+IP GTGF K G +RQ T I LE
Sbjct: 1289 ARVLAKAALRGRIDWLKGLKENVVLGGVIPAGTGFNK-GLVHCSRQHTNIILE 1340
Score = 25.4 bits (54), Expect(2) = 4e-14
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 160 LFEVEIRDISFYHR 119
LFE ++RDI FYHR
Sbjct: 1348 LFEGDMRDILFYHR 1361
[34][TOP]
>UniRef100_Q0ZJ30 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Vitis vinifera
RepID=RPOC2_VITVI
Length = 1394
Score = 75.5 bits (184), Expect(2) = 5e-14
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAAL GRIDWLKGLKEN+VLGG+IPVGTGFK + RS + + +ET K
Sbjct: 1298 ARVLAKAALWGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRSRQHNNIPLEMETKK 1353
Score = 25.4 bits (54), Expect(2) = 5e-14
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 172 KQ*KLFEVEIRDISFYHR 119
K+ LFE E+RDI F+HR
Sbjct: 1352 KKNNLFEREMRDILFHHR 1369
[35][TOP]
>UniRef100_A4QLI4 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Lobularia maritima
RepID=RPOC2_LOBMA
Length = 1371
Score = 75.9 bits (185), Expect(2) = 5e-14
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLE 171
ARVLAKAALRGRIDWLKGLKEN+VLGG+IP GTGF K G +RQ T I LE
Sbjct: 1292 ARVLAKAALRGRIDWLKGLKENVVLGGVIPAGTGFNK-GLVHCSRQHTNILLE 1343
Score = 25.0 bits (53), Expect(2) = 5e-14
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 172 KQ*KLFEVEIRDISFYHR 119
K LFE +RDI FYHR
Sbjct: 1347 KNFSLFEGNMRDILFYHR 1364
[36][TOP]
>UniRef100_Q4FFY6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Typha latifolia
RepID=Q4FFY6_TYPLA
Length = 1387
Score = 80.5 bits (197), Expect = 5e-14
Identities = 43/53 (81%), Positives = 45/53 (84%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLE 171
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF+K RS RQD I LE
Sbjct: 1288 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKFVHRS--RQDKNIYLE 1338
[37][TOP]
>UniRef100_C7SM29 RNA polymerase beta' subunit (Fragment) n=1 Tax=Joinvillea plicata
RepID=C7SM29_9POAL
Length = 1382
Score = 80.1 bits (196), Expect = 7e-14
Identities = 43/56 (76%), Positives = 46/56 (82%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF+K+ RS RQD I E K
Sbjct: 1290 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKLVHRS--RQDKNIYFEIQK 1343
[38][TOP]
>UniRef100_Q06H07 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Drimys granadensis
RepID=RPOC2_DRIGR
Length = 1381
Score = 80.1 bits (196), Expect = 7e-14
Identities = 43/56 (76%), Positives = 46/56 (82%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK + RS RQD I LE K
Sbjct: 1295 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS--RQDNNIPLEIKK 1348
[39][TOP]
>UniRef100_A6MMJ7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Dioscorea
elephantipes RepID=RPOC2_DIOEL
Length = 1382
Score = 80.1 bits (196), Expect = 7e-14
Identities = 43/55 (78%), Positives = 46/55 (83%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
RVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF+K+ RS RQD I LE K
Sbjct: 1292 RVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKLVHRS--RQDKNIHLEIKK 1344
[40][TOP]
>UniRef100_A9QAX6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anethum graveolens
RepID=A9QAX6_9APIA
Length = 1386
Score = 75.5 bits (184), Expect(2) = 8e-14
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLET 168
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGF+ G +RQ I+LET
Sbjct: 1294 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFE--GLVHPSRQHNNISLET 1345
Score = 24.6 bits (52), Expect(2) = 8e-14
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 181 LPWKQ*KLFEVEIRDISFYHR 119
L K +FE E+RDI F+HR
Sbjct: 1343 LETKNNNIFEGEMRDILFHHR 1363
[41][TOP]
>UniRef100_A4QK95 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Barbarea verna
RepID=RPOC2_BARVE
Length = 1379
Score = 74.3 bits (181), Expect(2) = 8e-14
Identities = 40/56 (71%), Positives = 44/56 (78%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
+RVLAKAALRGRIDWLKGLKEN+VLGG+IP GTGF K G +RQ T I LE K
Sbjct: 1292 SRVLAKAALRGRIDWLKGLKENVVLGGVIPAGTGFNK-GLVHCSRQYTNILLEKKK 1346
Score = 25.8 bits (55), Expect(2) = 8e-14
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 172 KQ*KLFEVEIRDISFYHR 119
K LFE ++RDI FYHR
Sbjct: 1347 KNLSLFEGDMRDILFYHR 1364
[42][TOP]
>UniRef100_A9XW80 DNA-directed RNA polymerase n=2 Tax=Heuchera RepID=A9XW80_HEUSA
Length = 1376
Score = 79.7 bits (195), Expect = 9e-14
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK++ S RQ I+LET K
Sbjct: 1287 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRLVHHS--RQHKNISLETKK 1340
[43][TOP]
>UniRef100_Q2L8Z5 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Gossypium hirsutum
RepID=RPOC2_GOSHI
Length = 1393
Score = 78.2 bits (191), Expect(2) = 1e-13
Identities = 42/56 (75%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IP GTGFK + RS RQ I LET K
Sbjct: 1297 ARVLAKAALRGRIDWLKGLKENVVLGGMIPAGTGFKGLVHRS--RQHNNILLETKK 1350
Score = 21.6 bits (44), Expect(2) = 1e-13
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 181 LPWKQ*KLFEVEIRDISFYHR 119
L K+ F E+RDI F+HR
Sbjct: 1346 LETKKKNFFGGEMRDIFFHHR 1366
[44][TOP]
>UniRef100_A0ZZ25 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Gossypium
barbadense RepID=RPOC2_GOSBA
Length = 1391
Score = 78.2 bits (191), Expect(2) = 1e-13
Identities = 42/56 (75%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IP GTGFK + RS RQ I LET K
Sbjct: 1295 ARVLAKAALRGRIDWLKGLKENVVLGGMIPAGTGFKGLVHRS--RQHNNILLETKK 1348
Score = 21.6 bits (44), Expect(2) = 1e-13
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 181 LPWKQ*KLFEVEIRDISFYHR 119
L K+ F E+RDI F+HR
Sbjct: 1344 LETKKKNFFGGEMRDIFFHHR 1364
[45][TOP]
>UniRef100_Q09G56 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Platanus
occidentalis RepID=RPOC2_PLAOC
Length = 1387
Score = 76.3 bits (186), Expect(2) = 1e-13
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK + RS R+ I LE K
Sbjct: 1293 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS--REHNNIPLEIKK 1346
Score = 23.5 bits (49), Expect(2) = 1e-13
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 172 KQ*KLFEVEIRDISFYHR 119
K+ LFE E+RD F+HR
Sbjct: 1345 KKKNLFEGEMRDTLFHHR 1362
[46][TOP]
>UniRef100_A9XWA9 DNA-directed RNA polymerase n=1 Tax=Quercus nigra RepID=A9XWA9_9ROSI
Length = 1396
Score = 79.3 bits (194), Expect = 1e-13
Identities = 42/54 (77%), Positives = 45/54 (83%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLET 168
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGF + RS RQ T I LET
Sbjct: 1302 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFNGLVQRS--RQHTNIPLET 1353
[47][TOP]
>UniRef100_A9L986 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Lemna minor
RepID=RPOC2_LEMMI
Length = 1366
Score = 79.3 bits (194), Expect = 1e-13
Identities = 38/61 (62%), Positives = 47/61 (77%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKIIRG 150
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGFKK+ S ++ + ++ + G
Sbjct: 1285 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSRQHKNIHLEIKNKNLFEG 1344
Query: 149 R 147
+
Sbjct: 1345 K 1345
[48][TOP]
>UniRef100_A9QBC9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Elaeis oleifera
RepID=A9QBC9_ELAOL
Length = 1375
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/58 (74%), Positives = 47/58 (81%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKII 156
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF+K+ S RQD I LE I+
Sbjct: 1286 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKLVHPS--RQDKNIHLEIRDIL 1341
[49][TOP]
>UniRef100_A4QJA5 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Aethionema
cordifolium RepID=RPOC2_AETCO
Length = 1385
Score = 73.2 bits (178), Expect(2) = 2e-13
Identities = 40/53 (75%), Positives = 42/53 (79%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLE 171
ARVLAKAALRGRIDWLKGLKEN+VLGG IP GTGF K G +RQ T I LE
Sbjct: 1293 ARVLAKAALRGRIDWLKGLKENVVLGGGIPAGTGFNK-GLVHCSRQHTNILLE 1344
Score = 25.8 bits (55), Expect(2) = 2e-13
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 160 LFEVEIRDISFYHR 119
LFE ++RDI FYHR
Sbjct: 1352 LFEEDMRDILFYHR 1365
[50][TOP]
>UniRef100_A4QJI9 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Aethionema
grandiflorum RepID=RPOC2_AETGR
Length = 1383
Score = 73.2 bits (178), Expect(2) = 2e-13
Identities = 40/53 (75%), Positives = 42/53 (79%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLE 171
ARVLAKAALRGRIDWLKGLKEN+VLGG IP GTGF K G +RQ T I LE
Sbjct: 1291 ARVLAKAALRGRIDWLKGLKENVVLGGGIPAGTGFNK-GLVHCSRQHTNILLE 1342
Score = 25.8 bits (55), Expect(2) = 2e-13
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 160 LFEVEIRDISFYHR 119
LFE ++RDI FYHR
Sbjct: 1350 LFEEDMRDILFYHR 1363
[51][TOP]
>UniRef100_Q589B8 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Silene latifolia
RepID=RPOC2_SILLA
Length = 1373
Score = 76.3 bits (186), Expect(2) = 2e-13
Identities = 38/53 (71%), Positives = 43/53 (81%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLE 171
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK RS+ + I L+
Sbjct: 1284 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGFVHRSNQHKSISIPLK 1336
Score = 22.7 bits (47), Expect(2) = 2e-13
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3
Query: 154 EVEIRDISFYHR 119
E E+RDI FYHR
Sbjct: 1344 EGEMRDILFYHR 1355
[52][TOP]
>UniRef100_A4QK08 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Arabis hirsuta
RepID=RPOC2_ARAHI
Length = 1371
Score = 73.2 bits (178), Expect(2) = 2e-13
Identities = 39/53 (73%), Positives = 42/53 (79%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLE 171
ARVLAKAALRGRIDWLKGLKEN+VLGG+IP GTGF K G +RQ T LE
Sbjct: 1292 ARVLAKAALRGRIDWLKGLKENVVLGGMIPAGTGFNK-GLVHCSRQHTNTLLE 1343
Score = 25.8 bits (55), Expect(2) = 2e-13
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 172 KQ*KLFEVEIRDISFYHR 119
K LFE ++RDI FYHR
Sbjct: 1347 KNLSLFEGDMRDILFYHR 1364
[53][TOP]
>UniRef100_A9XWB7 DNA-directed RNA polymerase n=1 Tax=Staphylea colchica
RepID=A9XWB7_9ROSI
Length = 1390
Score = 78.2 bits (191), Expect = 3e-13
Identities = 42/54 (77%), Positives = 45/54 (83%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLET 168
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK + RSS Q I LET
Sbjct: 1296 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRSS--QHKNIPLET 1347
[54][TOP]
>UniRef100_Q3BAQ2 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Phalaenopsis
aphrodite subsp. formosana RepID=RPOC2_PHAAO
Length = 1388
Score = 78.2 bits (191), Expect = 3e-13
Identities = 41/53 (77%), Positives = 45/53 (84%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLE 171
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF K+ RS +QD I L+
Sbjct: 1296 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFNKLVHRS--KQDKNIHLK 1346
[55][TOP]
>UniRef100_A9XW74 DNA-directed RNA polymerase n=1 Tax=Euonymus americanus
RepID=A9XW74_9ROSI
Length = 1395
Score = 71.2 bits (173), Expect(2) = 3e-13
Identities = 38/56 (67%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAAL+ RIDWLKGLKEN+VLGG+IPVGTGFK G ++Q I+L+T K
Sbjct: 1301 ARVLAKAALKSRIDWLKGLKENVVLGGMIPVGTGFK--GFVRFSQQHNNISLKTKK 1354
Score = 26.9 bits (58), Expect(2) = 3e-13
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 181 LPWKQ*KLFEVEIRDISFYHR 119
L K+ LF+ E+RDI FYHR
Sbjct: 1350 LKTKKTNLFKGEVRDILFYHR 1370
[56][TOP]
>UniRef100_Q4FFY8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nuphar advena
RepID=Q4FFY8_NUPAD
Length = 1390
Score = 76.3 bits (186), Expect(2) = 3e-13
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK+ RS R+ I LE K
Sbjct: 1297 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRFVHRS--REYNNIPLEIQK 1350
Score = 21.9 bits (45), Expect(2) = 3e-13
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 160 LFEVEIRDISFYHR 119
LF E+RDI F+HR
Sbjct: 1353 LFGGEMRDILFHHR 1366
[57][TOP]
>UniRef100_A9XW78 DNA-directed RNA polymerase n=1 Tax=Gunnera manicata
RepID=A9XW78_9MAGN
Length = 1386
Score = 71.6 bits (174), Expect(2) = 3e-13
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFK 222
ARVLAKAALRGR+DWLKGLKEN+VLGG+IPVGTGFK
Sbjct: 1296 ARVLAKAALRGRVDWLKGLKENVVLGGMIPVGTGFK 1331
Score = 26.6 bits (57), Expect(2) = 3e-13
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3
Query: 196 DKIPRLPWKQ*KLFEVEIRDISFYHR 119
+ IP P K+ LFE E+RDI F+HR
Sbjct: 1337 NNIPLEPKKK-NLFEGEMRDILFHHR 1361
[58][TOP]
>UniRef100_P16025 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Zea mays
RepID=RPOC2_MAIZE
Length = 1527
Score = 77.8 bits (190), Expect = 4e-13
Identities = 42/56 (75%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF+K RS QD + LE K
Sbjct: 1431 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKFVHRSP--QDKNLYLEIQK 1484
[59][TOP]
>UniRef100_A4QL09 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Draba nemorosa
RepID=RPOC2_DRANE
Length = 1381
Score = 73.2 bits (178), Expect(2) = 4e-13
Identities = 39/53 (73%), Positives = 42/53 (79%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLE 171
ARVLAKAALRGRIDWLKGLKEN+VLGG+IP GTGF K G +RQ T LE
Sbjct: 1292 ARVLAKAALRGRIDWLKGLKENVVLGGMIPAGTGFNK-GLVHCSRQHTNTLLE 1343
Score = 24.6 bits (52), Expect(2) = 4e-13
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 172 KQ*KLFEVEIRDISFYHR 119
K LFE +++DI FYHR
Sbjct: 1347 KNLSLFEGDMKDILFYHR 1364
[60][TOP]
>UniRef100_C3UNW2 DNA-directed RNA polymerase n=1 Tax=Megaleranthis saniculifolia
RepID=C3UNW2_9MAGN
Length = 1383
Score = 77.4 bits (189), Expect = 5e-13
Identities = 38/60 (63%), Positives = 45/60 (75%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKIIRG 150
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK + R S + + +E + G
Sbjct: 1289 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRLSQHSNISLEIEKKNLFEG 1348
[61][TOP]
>UniRef100_B8Y2W6 DNA-directed RNA polymerase n=1 Tax=Festuca arundinacea
RepID=B8Y2W6_FESAR
Length = 1504
Score = 77.4 bits (189), Expect = 5e-13
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQD 189
ARVLAKAAL+GRIDWLKGLKEN+VLGG+IPVGTGF+K RS RQ+
Sbjct: 1421 ARVLAKAALQGRIDWLKGLKENVVLGGVIPVGTGFQKFVTRSPTRQN 1467
[62][TOP]
>UniRef100_Q49L08 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Eucalyptus
globulus subsp. globulus RepID=RPOC2_EUCGG
Length = 1392
Score = 77.0 bits (188), Expect = 6e-13
Identities = 41/56 (73%), Positives = 46/56 (82%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+V+GG+IPVGTGFK + RS RQ I L+T K
Sbjct: 1298 ARVLAKAALRGRIDWLKGLKENVVIGGMIPVGTGFKGLVHRS--RQHKNIPLKTKK 1351
[63][TOP]
>UniRef100_B0Z5C9 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Oenothera
parviflora RepID=RPOC2_OENPA
Length = 1383
Score = 71.2 bits (173), Expect(2) = 7e-13
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFK 222
ARVLAKAALRGRIDWLKGLKEN+V+GG+IPVGTGFK
Sbjct: 1292 ARVLAKAALRGRIDWLKGLKENVVIGGMIPVGTGFK 1327
Score = 25.8 bits (55), Expect(2) = 7e-13
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 214 GIVQAQDKIPRLPWKQ*KLFEVEIRDISFYHR 119
G+V + +P K FE EIRDI F+HR
Sbjct: 1328 GLVHCSKQHKSIP-KNKHFFEGEIRDILFHHR 1358
[64][TOP]
>UniRef100_B0Z545 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Oenothera
glazioviana RepID=RPOC2_OENGL
Length = 1383
Score = 71.2 bits (173), Expect(2) = 7e-13
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFK 222
ARVLAKAALRGRIDWLKGLKEN+V+GG+IPVGTGFK
Sbjct: 1292 ARVLAKAALRGRIDWLKGLKENVVIGGMIPVGTGFK 1327
Score = 25.8 bits (55), Expect(2) = 7e-13
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 214 GIVQAQDKIPRLPWKQ*KLFEVEIRDISFYHR 119
G+V + +P K FE EIRDI F+HR
Sbjct: 1328 GLVHCSKQHKSIP-KNKHFFEGEIRDILFHHR 1358
[65][TOP]
>UniRef100_Q9MTM3 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Oenothera elata
subsp. hookeri RepID=RPOC2_OENEH
Length = 1383
Score = 71.2 bits (173), Expect(2) = 7e-13
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFK 222
ARVLAKAALRGRIDWLKGLKEN+V+GG+IPVGTGFK
Sbjct: 1292 ARVLAKAALRGRIDWLKGLKENVVIGGMIPVGTGFK 1327
Score = 25.8 bits (55), Expect(2) = 7e-13
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 214 GIVQAQDKIPRLPWKQ*KLFEVEIRDISFYHR 119
G+V + +P K FE EIRDI F+HR
Sbjct: 1328 GLVHCSKQHKSIP-KNKHFFEGEIRDILFHHR 1358
[66][TOP]
>UniRef100_B0Z4W1 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Oenothera biennis
RepID=RPOC2_OENBI
Length = 1383
Score = 71.2 bits (173), Expect(2) = 7e-13
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFK 222
ARVLAKAALRGRIDWLKGLKEN+V+GG+IPVGTGFK
Sbjct: 1292 ARVLAKAALRGRIDWLKGLKENVVIGGMIPVGTGFK 1327
Score = 25.8 bits (55), Expect(2) = 7e-13
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 214 GIVQAQDKIPRLPWKQ*KLFEVEIRDISFYHR 119
G+V + +P K FE EIRDI F+HR
Sbjct: 1328 GLVHCSKQHKSIP-KNKHFFEGEIRDILFHHR 1358
[67][TOP]
>UniRef100_B0Z4M7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Oenothera
argillicola RepID=RPOC2_OENAR
Length = 1383
Score = 71.2 bits (173), Expect(2) = 7e-13
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFK 222
ARVLAKAALRGRIDWLKGLKEN+V+GG+IPVGTGFK
Sbjct: 1292 ARVLAKAALRGRIDWLKGLKENVVIGGMIPVGTGFK 1327
Score = 25.8 bits (55), Expect(2) = 7e-13
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 214 GIVQAQDKIPRLPWKQ*KLFEVEIRDISFYHR 119
G+V + +P K FE EIRDI F+HR
Sbjct: 1328 GLVHCSKQHKSIP-KNKHFFEGEIRDILFHHR 1358
[68][TOP]
>UniRef100_A9XW65 DNA-directed RNA polymerase n=1 Tax=Cornus florida RepID=A9XW65_CORFO
Length = 1391
Score = 76.6 bits (187), Expect = 8e-13
Identities = 42/56 (75%), Positives = 44/56 (78%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG IPVGTGFK + S RQ I LET K
Sbjct: 1296 ARVLAKAALRGRIDWLKGLKENVVLGGRIPVGTGFKGLAHPS--RQHNNIPLETKK 1349
[69][TOP]
>UniRef100_Q2VEI6 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Solanum tuberosum
RepID=RPOC2_SOLTU
Length = 1392
Score = 76.6 bits (187), Expect = 8e-13
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK G ++Q I LET K
Sbjct: 1298 ARVLAKAALRGRIDWLKGLKENVVLGGVIPVGTGFK--GLVHPSKQHNNIPLETKK 1351
[70][TOP]
>UniRef100_Q2MIB0 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Solanum
lycopersicum RepID=RPOC2_SOLLC
Length = 1392
Score = 76.6 bits (187), Expect = 8e-13
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK G ++Q I LET K
Sbjct: 1298 ARVLAKAALRGRIDWLKGLKENVVLGGVIPVGTGFK--GLVHPSKQHNNIPLETKK 1351
[71][TOP]
>UniRef100_Q2MIJ7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Solanum
bulbocastanum RepID=RPOC2_SOLBU
Length = 1392
Score = 76.6 bits (187), Expect = 8e-13
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK G ++Q I LET K
Sbjct: 1298 ARVLAKAALRGRIDWLKGLKENVVLGGVIPVGTGFK--GLVHPSKQHNNIPLETKK 1351
[72][TOP]
>UniRef100_Q06GS0 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Piper cenocladum
RepID=RPOC2_PIPCE
Length = 1380
Score = 76.6 bits (187), Expect = 8e-13
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLE 171
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK RS RQ I+LE
Sbjct: 1296 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGFVRRS--RQHNNISLE 1346
[73][TOP]
>UniRef100_Q33C48 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Nicotiana
tomentosiformis RepID=RPOC2_NICTO
Length = 1392
Score = 76.6 bits (187), Expect = 8e-13
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK G ++Q I LET K
Sbjct: 1298 ARVLAKAALRGRIDWLKGLKENVVLGGVIPVGTGFK--GLVHPSKQHNNIPLETKK 1351
[74][TOP]
>UniRef100_Q3C1G9 DNA-directed RNA polymerase subunit beta'' n=3 Tax=Nicotiana
RepID=RPOC2_NICSY
Length = 1392
Score = 76.6 bits (187), Expect = 8e-13
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK G ++Q I LET K
Sbjct: 1298 ARVLAKAALRGRIDWLKGLKENVVLGGVIPVGTGFK--GLVHPSKQHNNIPLETKK 1351
[75][TOP]
>UniRef100_Q8S8Y1 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Atropa belladonna
RepID=RPOC2_ATRBE
Length = 1389
Score = 76.6 bits (187), Expect = 8e-13
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK G ++Q I LET K
Sbjct: 1295 ARVLAKAALRGRIDWLKGLKENVVLGGVIPVGTGFK--GLVHPSKQHNNIPLETKK 1348
[76][TOP]
>UniRef100_Q6EW58 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Nymphaea alba
RepID=RPOC2_NYMAL
Length = 1401
Score = 76.3 bits (186), Expect(2) = 9e-13
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK+ RS R+ I LE K
Sbjct: 1294 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKRFVHRS--REYNNIPLEIQK 1347
Score = 20.4 bits (41), Expect(2) = 9e-13
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 157 FEVEIRDISFYHR 119
F E+RDI F+HR
Sbjct: 1351 FGGEMRDILFHHR 1363
[77][TOP]
>UniRef100_C8XU09 RNA polymerase beta'' subunit n=1 Tax=Coix lacryma-jobi
RepID=C8XU09_COILA
Length = 1520
Score = 76.3 bits (186), Expect = 1e-12
Identities = 41/56 (73%), Positives = 44/56 (78%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF+K RS QD + E K
Sbjct: 1424 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKFVHRSP--QDKNLYFEIQK 1477
[78][TOP]
>UniRef100_C7BF65 DNA-directed RNA polymerase n=1 Tax=Dendrocalamus latiflorus
RepID=C7BF65_9POAL
Length = 1519
Score = 76.3 bits (186), Expect = 1e-12
Identities = 41/56 (73%), Positives = 44/56 (78%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF+K RS QD + E K
Sbjct: 1423 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKFVHRSP--QDKNLYFEIQK 1476
[79][TOP]
>UniRef100_C6GJ48 DNA-directed RNA polymerase n=1 Tax=Bambusa oldhamii
RepID=C6GJ48_BAMOL
Length = 1520
Score = 76.3 bits (186), Expect = 1e-12
Identities = 41/56 (73%), Positives = 44/56 (78%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF+K RS QD + E K
Sbjct: 1424 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKFVHRSP--QDKNLYFEIQK 1477
[80][TOP]
>UniRef100_B5ANL6 DNA-directed RNA polymerase n=1 Tax=Chasmanthium latifolium
RepID=B5ANL6_9POAL
Length = 1512
Score = 76.3 bits (186), Expect = 1e-12
Identities = 41/56 (73%), Positives = 44/56 (78%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF+K RS QD + E K
Sbjct: 1416 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKFVHRSP--QDKNLYFEIQK 1469
[81][TOP]
>UniRef100_Q9XPS9 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Triticum aestivum
RepID=RPOC2_WHEAT
Length = 1479
Score = 76.3 bits (186), Expect = 1e-12
Identities = 41/56 (73%), Positives = 44/56 (78%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF+K RS QD + E K
Sbjct: 1394 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKFVHRSP--QDKNLYFEIKK 1447
[82][TOP]
>UniRef100_P11704 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Spinacia oleracea
RepID=RPOC2_SPIOL
Length = 1361
Score = 76.3 bits (186), Expect = 1e-12
Identities = 38/60 (63%), Positives = 44/60 (73%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKIIRG 150
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK SS +D + + + G
Sbjct: 1282 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGFVHHSSQHKDIPLKTKKQNLFEG 1341
[83][TOP]
>UniRef100_Q01923 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Sorghum bicolor
RepID=RPOC2_SORBI
Length = 1520
Score = 76.3 bits (186), Expect = 1e-12
Identities = 41/56 (73%), Positives = 44/56 (78%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF+K RS QD + E K
Sbjct: 1424 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKFVHRSP--QDKNLYFEIKK 1477
[84][TOP]
>UniRef100_Q6ENX1 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Saccharum
officinarum RepID=RPOC2_SACOF
Length = 1534
Score = 76.3 bits (186), Expect = 1e-12
Identities = 41/56 (73%), Positives = 44/56 (78%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF+K RS QD + E K
Sbjct: 1438 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKFVHRSP--QDKNLYFEIQK 1491
[85][TOP]
>UniRef100_Q6L3A5 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Saccharum sp.
RepID=RPOC2_SACHY
Length = 1534
Score = 76.3 bits (186), Expect = 1e-12
Identities = 41/56 (73%), Positives = 44/56 (78%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF+K RS QD + E K
Sbjct: 1438 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKFVHRSP--QDKNLYFEIQK 1491
[86][TOP]
>UniRef100_A8Y9G2 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Lolium perenne
RepID=RPOC2_LOLPR
Length = 1466
Score = 76.3 bits (186), Expect = 1e-12
Identities = 41/56 (73%), Positives = 44/56 (78%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF+K RS QD + E K
Sbjct: 1370 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKFVHRSP--QDKNLYFEIQK 1423
[87][TOP]
>UniRef100_A1E9I3 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Hordeum vulgare
RepID=RPOC2_HORVU
Length = 1477
Score = 76.3 bits (186), Expect = 1e-12
Identities = 41/56 (73%), Positives = 44/56 (78%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF+K RS QD + E K
Sbjct: 1392 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKFVHRSP--QDKNLYFEIKK 1445
[88][TOP]
>UniRef100_P0C508 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Oryza sativa
Indica Group RepID=RPOC2_ORYSI
Length = 1513
Score = 73.9 bits (180), Expect(2) = 1e-12
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDR 207
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF+K R
Sbjct: 1419 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKFVHR 1459
Score = 22.3 bits (46), Expect(2) = 1e-12
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 199 QDKIPRLPWKQ*KLFEVEIRDISFYH 122
QDK ++ KLF E+RDI F H
Sbjct: 1462 QDKNLYFEIQKKKLFASEMRDILFLH 1487
[89][TOP]
>UniRef100_Q6ENI2 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Oryza nivara
RepID=RPOC2_ORYNI
Length = 1513
Score = 73.9 bits (180), Expect(2) = 1e-12
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDR 207
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF+K R
Sbjct: 1419 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKFVHR 1459
Score = 22.3 bits (46), Expect(2) = 1e-12
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 199 QDKIPRLPWKQ*KLFEVEIRDISFYH 122
QDK ++ KLF E+RDI F H
Sbjct: 1462 QDKNLYFEIQKKKLFASEMRDILFLH 1487
[90][TOP]
>UniRef100_C7J1G9 Os04g0240100 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group
RepID=C7J1G9_ORYSJ
Length = 1199
Score = 73.9 bits (180), Expect(2) = 1e-12
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDR 207
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF+K R
Sbjct: 1105 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKFVHR 1145
Score = 22.3 bits (46), Expect(2) = 1e-12
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 199 QDKIPRLPWKQ*KLFEVEIRDISFYH 122
QDK ++ KLF E+RDI F H
Sbjct: 1148 QDKNLYFEIQKKKLFASEMRDILFLH 1173
[91][TOP]
>UniRef100_B8BGE3 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8BGE3_ORYSI
Length = 344
Score = 73.9 bits (180), Expect(2) = 1e-12
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDR 207
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF+K R
Sbjct: 250 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKFVHR 290
Score = 22.3 bits (46), Expect(2) = 1e-12
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 199 QDKIPRLPWKQ*KLFEVEIRDISFYH 122
QDK ++ KLF E+RDI F H
Sbjct: 293 QDKNLYFEIQKKKLFASEMRDILFLH 318
[92][TOP]
>UniRef100_Q68S16 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Panax ginseng
RepID=RPOC2_PANGI
Length = 1387
Score = 75.9 bits (185), Expect = 1e-12
Identities = 41/54 (75%), Positives = 44/54 (81%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLET 168
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK G +RQ I LET
Sbjct: 1293 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK--GLVPPSRQHKNIPLET 1344
[93][TOP]
>UniRef100_Q06RE1 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Jasminum
nudiflorum RepID=RPOC2_JASNU
Length = 1397
Score = 75.9 bits (185), Expect = 1e-12
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IP+GTGFK G ++QD +LET K
Sbjct: 1303 ARVLAKAALRGRIDWLKGLKENVVLGGMIPLGTGFK--GLVPPSKQDNNSSLETKK 1356
[94][TOP]
>UniRef100_P0C509 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Oryza sativa
RepID=RPOC2_ORYSJ
Length = 1513
Score = 74.3 bits (181), Expect(2) = 1e-12
Identities = 37/57 (64%), Positives = 44/57 (77%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKI 159
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF+K R ++ ++ K+
Sbjct: 1419 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKFVHRYPQNKNLYFEIQKKKL 1475
Score = 21.6 bits (44), Expect(2) = 1e-12
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 163 KLFEVEIRDISFYH 122
KLF E+RDI F H
Sbjct: 1474 KLFASEMRDILFLH 1487
[95][TOP]
>UniRef100_C3KEF7 DNA-directed RNA polymerase n=1 Tax=Ceratophyllum demersum
RepID=C3KEF7_CERDE
Length = 1390
Score = 75.5 bits (184), Expect = 2e-12
Identities = 41/56 (73%), Positives = 44/56 (78%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK + S RQ I LE K
Sbjct: 1292 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHHS--RQHNNIPLEIKK 1345
[96][TOP]
>UniRef100_A8SE78 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Ceratophyllum
demersum RepID=RPOC2_CERDE
Length = 1390
Score = 75.5 bits (184), Expect = 2e-12
Identities = 41/56 (73%), Positives = 44/56 (78%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK + S RQ I LE K
Sbjct: 1292 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHHS--RQHNNIPLEIKK 1345
[97][TOP]
>UniRef100_P60289 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Amborella
trichopoda RepID=RPOC2_AMBTC
Length = 1373
Score = 70.9 bits (172), Expect(2) = 2e-12
Identities = 38/55 (69%), Positives = 43/55 (78%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
RVLAKAALR RIDWLKGLKEN+VLGG+IPVGTGFK G +R+ I+LE K
Sbjct: 1288 RVLAKAALRSRIDWLKGLKENVVLGGMIPVGTGFK--GFVHHSREHNNISLEIKK 1340
Score = 24.6 bits (52), Expect(2) = 2e-12
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 172 KQ*KLFEVEIRDISFYHR 119
K+ LF+ ++RDI FYHR
Sbjct: 1339 KKKNLFDGKMRDILFYHR 1356
[98][TOP]
>UniRef100_A1EA00 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Agrostis
stolonifera RepID=RPOC2_AGRST
Length = 1466
Score = 75.1 bits (183), Expect = 2e-12
Identities = 41/56 (73%), Positives = 43/56 (76%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGF K RS QD + E K
Sbjct: 1370 ARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFLKFVHRSP--QDKNLYFEIQK 1423
[99][TOP]
>UniRef100_B7T486 DNA-directed RNA polymerase n=1 Tax=Pelargonium cotyledonis
RepID=B7T486_9ROSI
Length = 1363
Score = 74.7 bits (182), Expect = 3e-12
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLET 168
ARVLAK+ALRGRIDWLKGLKEN+VLGG+IPVGTGFK + S RQ ++LET
Sbjct: 1286 ARVLAKSALRGRIDWLKGLKENVVLGGLIPVGTGFKGLVHPPS-RQHKTLSLET 1338
[100][TOP]
>UniRef100_A9XWA6 DNA-directed RNA polymerase n=1 Tax=Plumbago auriculata
RepID=A9XWA6_PLUAU
Length = 1370
Score = 74.3 bits (181), Expect = 4e-12
Identities = 36/50 (72%), Positives = 42/50 (84%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKI 180
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK + RS ++ +
Sbjct: 1283 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRSRQHKNIPV 1332
[101][TOP]
>UniRef100_A9XWA2 DNA-directed RNA polymerase n=1 Tax=Oxalis latifolia
RepID=A9XWA2_9ROSI
Length = 1370
Score = 74.3 bits (181), Expect = 4e-12
Identities = 40/53 (75%), Positives = 44/53 (83%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLE 171
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK + RS R+ I LE
Sbjct: 1276 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS--RKYNHIPLE 1326
[102][TOP]
>UniRef100_B1NWE0 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Manihot esculenta
RepID=RPOC2_MANES
Length = 1393
Score = 74.3 bits (181), Expect = 4e-12
Identities = 40/55 (72%), Positives = 44/55 (80%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
RVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK G +RQ I L+T K
Sbjct: 1298 RVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK--GLVQGSRQHKNIPLKTKK 1350
[103][TOP]
>UniRef100_Q09MI8 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Citrus sinensis
RepID=RPOC2_CITSI
Length = 1403
Score = 74.3 bits (181), Expect = 4e-12
Identities = 41/55 (74%), Positives = 43/55 (78%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
RVLAKAALRGRIDWLKGLKEN+VLGGIIPVGTGFK G +RQ I LE K
Sbjct: 1304 RVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFK--GLVHCSRQHNNILLERQK 1356
[104][TOP]
>UniRef100_B7T416 DNA-directed RNA polymerase n=1 Tax=Monsonia vanderietiae
RepID=B7T416_9ROSI
Length = 1392
Score = 68.9 bits (167), Expect(2) = 6e-12
Identities = 36/52 (69%), Positives = 42/52 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITL 174
ARVLAK+ALRGRIDWLKGLKEN+VLG +IPVGTGFK S+RQ ++L
Sbjct: 1309 ARVLAKSALRGRIDWLKGLKENVVLGEMIPVGTGFK-----GSSRQHKPLSL 1355
Score = 25.0 bits (53), Expect(2) = 6e-12
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 181 LPWKQ*KLFEVEIRDISFYHR 119
L K+ LFE ++R+I FYHR
Sbjct: 1357 LETKKRSLFEGKVRNIFFYHR 1377
[105][TOP]
>UniRef100_C0LE64 DNA-directed RNA polymerase n=1 Tax=Jatropha curcas
RepID=C0LE64_9ROSI
Length = 1394
Score = 73.6 bits (179), Expect = 7e-12
Identities = 40/56 (71%), Positives = 44/56 (78%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLGG+IP GTGFK G +RQ I L+T K
Sbjct: 1307 ARVLAKAALRGRIDWLKGLKENVVLGGMIPGGTGFK--GLVQGSRQHNNIPLKTKK 1360
[106][TOP]
>UniRef100_Q5QA61 RpoC2 (Fragment) n=1 Tax=Acorus gramineus RepID=Q5QA61_ACOGR
Length = 602
Score = 73.2 bits (178), Expect = 9e-12
Identities = 39/56 (69%), Positives = 44/56 (78%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGR+DWLKGLKEN+VLG +IPVGTGFK + RS R+ I LE K
Sbjct: 507 ARVLAKAALRGRVDWLKGLKENVVLGAMIPVGTGFKALVHRS--RKPNNIHLEIKK 560
[107][TOP]
>UniRef100_Q4FFY7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ranunculus macranthus
RepID=Q4FFY7_RANMC
Length = 1376
Score = 73.2 bits (178), Expect = 9e-12
Identities = 36/43 (83%), Positives = 39/43 (90%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSS 201
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK + R S
Sbjct: 1291 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRLS 1333
[108][TOP]
>UniRef100_A1XGM8 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Ranunculus
macranthus RepID=RPOC2_RANMC
Length = 1383
Score = 73.2 bits (178), Expect = 9e-12
Identities = 36/43 (83%), Positives = 39/43 (90%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSS 201
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK + R S
Sbjct: 1288 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRLS 1330
[109][TOP]
>UniRef100_Q3V544 DNA-directed RNA polymerase subunit beta'' n=3 Tax=Acorus
RepID=RPOC2_ACOCL
Length = 1386
Score = 73.2 bits (178), Expect = 9e-12
Identities = 39/56 (69%), Positives = 44/56 (78%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGR+DWLKGLKEN+VLG +IPVGTGFK + RS R+ I LE K
Sbjct: 1291 ARVLAKAALRGRVDWLKGLKENVVLGAMIPVGTGFKALVHRS--RKPNNIHLEIKK 1344
[110][TOP]
>UniRef100_Q4FFY9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba
RepID=Q4FFY9_GINBI
Length = 1375
Score = 72.8 bits (177), Expect = 1e-11
Identities = 35/45 (77%), Positives = 38/45 (84%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSAR 195
ARVLAKAALRGRIDWLKGLKEN++LGGIIP GTGFK+ S R
Sbjct: 1280 ARVLAKAALRGRIDWLKGLKENVILGGIIPAGTGFKRFLRHSEER 1324
[111][TOP]
>UniRef100_B7T382 DNA-directed RNA polymerase n=1 Tax=Geranium carolinianum
RepID=B7T382_9ROSI
Length = 1420
Score = 72.8 bits (177), Expect = 1e-11
Identities = 39/56 (69%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
A+VLAKAALRGRIDWLKGLKEN+VLG +IPVGTGFK G +RQ ++LET K
Sbjct: 1322 AQVLAKAALRGRIDWLKGLKENVVLGEMIPVGTGFK--GLVQPSRQQKTVSLETKK 1375
[112][TOP]
>UniRef100_A9QC90 DNA-directed RNA polymerase (Fragment) n=1 Tax=Trachelium caeruleum
RepID=A9QC90_TRACE
Length = 1394
Score = 72.8 bits (177), Expect = 1e-11
Identities = 38/53 (71%), Positives = 41/53 (77%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLE 171
ARVLAKAALRGRIDWLKGLKEN+VL G+IPVGTGFK +RQ I LE
Sbjct: 1298 ARVLAKAALRGRIDWLKGLKENVVLAGMIPVGTGFKAKRLVHPSRQQNNIPLE 1350
[113][TOP]
>UniRef100_A9XW52 DNA-directed RNA polymerase n=1 Tax=Bulnesia arborea
RepID=A9XW52_BULAR
Length = 1369
Score = 72.4 bits (176), Expect = 1e-11
Identities = 39/56 (69%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAK+ALRGRIDWLKGLKEN+VLGG+IPVGTGFK G +R+ K+ ET K
Sbjct: 1295 ARVLAKSALRGRIDWLKGLKENVVLGGMIPVGTGFK--GLVYCSRKHNKMIWETKK 1348
[114][TOP]
>UniRef100_A7Y3B4 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Ipomoea purpurea
RepID=RPOC2_IPOPU
Length = 1401
Score = 72.4 bits (176), Expect = 1e-11
Identities = 37/56 (66%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAAL+GRIDWLKGLKEN+VLGG+IP GTGF+ G ++Q ++LET K
Sbjct: 1301 ARVLAKAALQGRIDWLKGLKENVVLGGVIPAGTGFR--GLVHPSKQYNNLSLETTK 1354
[115][TOP]
>UniRef100_B9T8I6 DNA-directed RNA polymerase beta chain, putative n=1 Tax=Ricinus
communis RepID=B9T8I6_RICCO
Length = 384
Score = 72.0 bits (175), Expect = 2e-11
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFK 222
ARVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK
Sbjct: 216 ARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFK 251
[116][TOP]
>UniRef100_Q06FX1 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Pelargonium x
hortorum RepID=RPOC2_PELHO
Length = 1376
Score = 71.2 bits (173), Expect(2) = 2e-11
Identities = 37/54 (68%), Positives = 44/54 (81%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLET 168
ARVLAKAALRGRIDWLKGLKEN+VLGG+ P GTGF+ + SS + T ++LET
Sbjct: 1303 ARVLAKAALRGRIDWLKGLKENVVLGGMSPAGTGFRGLVHPSSKKYKT-LSLET 1355
Score = 20.8 bits (42), Expect(2) = 2e-11
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = -3
Query: 160 LFEVEIRDISFYHR 119
LF+ ++RD+ F+H+
Sbjct: 1360 LFDGKVRDLLFHHK 1373
[117][TOP]
>UniRef100_B9SD12 DNA-directed RNA polymerase beta chain, putative n=1 Tax=Ricinus
communis RepID=B9SD12_RICCO
Length = 360
Score = 71.6 bits (174), Expect = 3e-11
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQ 192
ARVLAKAALRGRIDWLKGLKE +VLGG+IPVGTGFK + S +Q
Sbjct: 216 ARVLAKAALRGRIDWLKGLKEKVVLGGMIPVGTGFKGLVQASRRKQ 261
[118][TOP]
>UniRef100_B2XWN9 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Fagopyrum
esculentum subsp. ancestrale RepID=RPOC2_FAGEA
Length = 1365
Score = 71.6 bits (174), Expect = 3e-11
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKIIRG 150
ARVLAKAALRGRIDWLKGLKEN+VLGG IPVGTGFK + SS + + + + G
Sbjct: 1282 ARVLAKAALRGRIDWLKGLKENVVLGGKIPVGTGFKGLVHPSSQHKSIPLKNKKKNLFEG 1341
[119][TOP]
>UniRef100_B2LMI2 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Guizotia
abyssinica RepID=RPOC2_GUIAB
Length = 1381
Score = 67.8 bits (164), Expect(2) = 3e-11
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFK 222
ARVLAKAAL GRIDWLKGLKEN+VLGG+IPVG+GFK
Sbjct: 1291 ARVLAKAALLGRIDWLKGLKENVVLGGMIPVGSGFK 1326
Score = 23.9 bits (50), Expect(2) = 3e-11
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 172 KQ*KLFEVEIRDISFYHR 119
K+ L E E++DI FYHR
Sbjct: 1344 KKENLLEGEMKDILFYHR 1361
[120][TOP]
>UniRef100_Q1KXX0 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Helianthus annuus
RepID=RPOC2_HELAN
Length = 1362
Score = 67.8 bits (164), Expect(2) = 3e-11
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFK 222
ARVLAKAAL GRIDWLKGLKEN+VLGG+IPVG+GFK
Sbjct: 1291 ARVLAKAALLGRIDWLKGLKENVVLGGMIPVGSGFK 1326
Score = 23.9 bits (50), Expect(2) = 3e-11
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 172 KQ*KLFEVEIRDISFYHR 119
K+ L E E++DI FYHR
Sbjct: 1344 KKKNLLEGEMKDILFYHR 1361
[121][TOP]
>UniRef100_A9QB53 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cycas micronesica
RepID=A9QB53_9SPER
Length = 1351
Score = 71.2 bits (173), Expect = 3e-11
Identities = 35/61 (57%), Positives = 44/61 (72%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKIIRG 150
ARVLA+AAL+GRIDWLKGLKEN++LGGI+P GTGFK+ S R + E +I G
Sbjct: 1280 ARVLARAALQGRIDWLKGLKENVILGGIVPAGTGFKQSIYHSGERNEIDPRTEKNEIFSG 1339
Query: 149 R 147
+
Sbjct: 1340 K 1340
[122][TOP]
>UniRef100_A6MMT4 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Illicium
oligandrum RepID=RPOC2_ILLOL
Length = 1385
Score = 71.2 bits (173), Expect = 3e-11
Identities = 38/55 (69%), Positives = 42/55 (76%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
RVLAKAALRGRIDWLKGLKEN+VLGG+IPVGTGFK + S R+ I E K
Sbjct: 1292 RVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHHS--REHNNIPFEIQK 1344
[123][TOP]
>UniRef100_Q56P11 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Lactuca sativa
RepID=RPOC2_LACSA
Length = 1381
Score = 67.8 bits (164), Expect(2) = 4e-11
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFK 222
ARVLAKAAL GRIDWLKGLKEN+VLGG+IPVG+GFK
Sbjct: 1291 ARVLAKAALLGRIDWLKGLKENVVLGGMIPVGSGFK 1326
Score = 23.1 bits (48), Expect(2) = 4e-11
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 160 LFEVEIRDISFYHR 119
L E E++DI FYHR
Sbjct: 1348 LLEGEMKDILFYHR 1361
[124][TOP]
>UniRef100_B7T3U5 DNA-directed RNA polymerase n=1 Tax=Monsonia speciosa
RepID=B7T3U5_9ROSI
Length = 1398
Score = 70.1 bits (170), Expect = 7e-11
Identities = 38/70 (54%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK--II 156
ARVLAK+A+RGR+DWLKGLKEN+VLG +IPVGTGFK + S + + LET + +
Sbjct: 1311 ARVLAKSAIRGRLDWLKGLKENVVLGEMIPVGTGFKGLVHPSRQLKTLSLALETKRRSLF 1370
Query: 155 RGRN*RYFVL 126
GR R L
Sbjct: 1371 EGRKVRNLFL 1380
[125][TOP]
>UniRef100_B7T3F3 DNA-directed RNA polymerase n=1 Tax=Geranium macrorrhizum
RepID=B7T3F3_9ROSI
Length = 1421
Score = 70.1 bits (170), Expect = 7e-11
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLG +IPVGTG K G ++Q ++LET K
Sbjct: 1323 ARVLAKAALRGRIDWLKGLKENVVLGEMIPVGTGLK--GLVQPSKQHKTLSLETKK 1376
[126][TOP]
>UniRef100_A7M956 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Cuscuta reflexa
RepID=RPOC2_CUSRE
Length = 1379
Score = 69.7 bits (169), Expect = 1e-10
Identities = 34/53 (64%), Positives = 40/53 (75%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLE 171
ARVL+KAAL GRIDWLKGLKEN+VLGG+IP GTGF+ + D S I L+
Sbjct: 1287 ARVLSKAALGGRIDWLKGLKENVVLGGVIPAGTGFRGLVDPSKQYNKNNIPLK 1339
[127][TOP]
>UniRef100_B1VKH5 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Cryptomeria
japonica RepID=RPOC2_CRYJA
Length = 1212
Score = 69.7 bits (169), Expect = 1e-10
Identities = 32/48 (66%), Positives = 40/48 (83%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDT 186
A+VLAK+AL+GRIDWLKGLKEN++LGG+IPVGTGF ++ RS T
Sbjct: 1087 AQVLAKSALQGRIDWLKGLKENVILGGMIPVGTGFNRLVKRSKMNSRT 1134
[128][TOP]
>UniRef100_B7T3M4 DNA-directed RNA polymerase n=1 Tax=Geranium palmatum
RepID=B7T3M4_9ROSI
Length = 1417
Score = 68.9 bits (167), Expect = 2e-10
Identities = 38/56 (67%), Positives = 43/56 (76%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAALRGRIDWLKGLKEN+VLG +IPVGTG K G +RQ ++ ET K
Sbjct: 1320 ARVLAKAALRGRIDWLKGLKENVVLGEMIPVGTGLK--GLVQPSRQHKTLSRETKK 1373
[129][TOP]
>UniRef100_B7T312 DNA-directed RNA polymerase n=1 Tax=Erodium texanum
RepID=B7T312_EROTE
Length = 1395
Score = 68.9 bits (167), Expect = 2e-10
Identities = 37/56 (66%), Positives = 45/56 (80%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIK 162
ARVLAKAAL+GRIDWLKGLKE++VLG +IP GTGFK G S+R+ ++LET K
Sbjct: 1323 ARVLAKAALQGRIDWLKGLKEHVVLGEMIPAGTGFK--GLVHSSREHKALSLETKK 1376
[130][TOP]
>UniRef100_A6H5F7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Cycas taitungensis
RepID=RPOC2_CYCTA
Length = 1339
Score = 68.9 bits (167), Expect = 2e-10
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQD 189
ARVLA+AAL+GRIDWLKGLKEN++LGGI+P GTGFK+ S R +
Sbjct: 1286 ARVLARAALQGRIDWLKGLKENVILGGIVPAGTGFKQSIYHSGERNE 1332
[131][TOP]
>UniRef100_A8W3B4 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Cuscuta exaltata
RepID=RPOC2_CUSEX
Length = 1379
Score = 68.9 bits (167), Expect = 2e-10
Identities = 36/54 (66%), Positives = 43/54 (79%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLET 168
ARVL+KAAL GRIDWLKGLKEN+VLGG+IP GTGF+ + D S +Q I L+T
Sbjct: 1301 ARVLSKAALGGRIDWLKGLKENVVLGGVIPAGTGFRGLVDPS--KQYKTIPLKT 1352
[132][TOP]
>UniRef100_B7T2U1 DNA-directed RNA polymerase n=1 Tax=Erodium chrysanthum
RepID=B7T2U1_9ROSI
Length = 1395
Score = 68.6 bits (166), Expect(2) = 2e-10
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSS 201
ARVLAKAALRGRIDWLKGLKEN+VLG +IP GTGFK + SS
Sbjct: 1319 ARVLAKAALRGRIDWLKGLKENVVLGEMIPAGTGFKGLVHSSS 1361
Score = 20.4 bits (41), Expect(2) = 2e-10
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 160 LFEVEIRDISFYHR 119
LFE R+ FYHR
Sbjct: 1375 LFEERARNCFFYHR 1388
[133][TOP]
>UniRef100_B9RPW1 DNA-directed RNA polymerase beta chain, putative n=1 Tax=Ricinus
communis RepID=B9RPW1_RICCO
Length = 68
Score = 68.6 bits (166), Expect = 2e-10
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFK 222
A VLAK ALRGRIDWLKGLKEN+VLGG+IPVGTGFK
Sbjct: 26 AHVLAKVALRGRIDWLKGLKENVVLGGMIPVGTGFK 61
[134][TOP]
>UniRef100_Q8MA10 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Chaetosphaeridium
globosum RepID=RPOC2_CHAGL
Length = 1373
Score = 67.0 bits (162), Expect = 6e-10
Identities = 32/68 (47%), Positives = 50/68 (73%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKIIRGR 147
+VL KAAL+GRIDWL+GLKEN++LGGIIP GTG++KI ++ ++ +I + + +
Sbjct: 1281 KVLTKAALQGRIDWLQGLKENVILGGIIPAGTGYQKILNKKNSNFLENKKEVSIFVQKQK 1340
Query: 146 N*RYFVLP 123
N ++ +LP
Sbjct: 1341 NIKFNILP 1348
[135][TOP]
>UniRef100_C3VZN6 DNA-directed RNA polymerase n=1 Tax=Pinus aristata RepID=C3VZN6_9CONI
Length = 1211
Score = 64.3 bits (155), Expect(2) = 8e-10
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
Score = 22.3 bits (46), Expect(2) = 8e-10
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 160 LFEVEIRDISFYHR*R*LFFFSFKKIY 80
LF +++DI F+H + FFS ++ Y
Sbjct: 1174 LFSNKVKDILFHHDHDKVSFFSIQENY 1200
[136][TOP]
>UniRef100_C3VXW7 DNA-directed RNA polymerase n=1 Tax=Pinus rzedowskii
RepID=C3VXW7_PINRZ
Length = 1209
Score = 64.3 bits (155), Expect(2) = 8e-10
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
Score = 22.3 bits (46), Expect(2) = 8e-10
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 160 LFEVEIRDISFYHR*R*LFFFSFKKIY 80
LF +++DI F+H + FFS ++ Y
Sbjct: 1174 LFSNKVKDILFHHDHDKVSFFSIQENY 1200
[137][TOP]
>UniRef100_P60290 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Physcomitrella
patens RepID=RPOC2_PHYPA
Length = 1330
Score = 66.6 bits (161), Expect = 8e-10
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKI 216
RVLAKAALRGRIDWLKGLKEN++LGGIIP GTG +++
Sbjct: 1246 RVLAKAALRGRIDWLKGLKENVILGGIIPTGTGCEEV 1282
[138][TOP]
>UniRef100_B9RL05 30S ribosomal protein S2, putative n=1 Tax=Ricinus communis
RepID=B9RL05_RICCO
Length = 317
Score = 66.6 bits (161), Expect = 8e-10
Identities = 30/35 (85%), Positives = 35/35 (100%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFK 222
RVLAKAALRGRI+WLKGLKEN+VLGG+IP+G+GFK
Sbjct: 57 RVLAKAALRGRINWLKGLKENVVLGGMIPIGSGFK 91
[139][TOP]
>UniRef100_B9VH97 DNA-directed RNA polymerase n=1 Tax=Syntrichia ruralis
RepID=B9VH97_TORRU
Length = 1358
Score = 66.2 bits (160), Expect = 1e-09
Identities = 29/37 (78%), Positives = 35/37 (94%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKI 216
RVLAKAALRGRIDWLKGLKEN++LGGI+P GTG +++
Sbjct: 1268 RVLAKAALRGRIDWLKGLKENVILGGIVPAGTGCQEV 1304
[140][TOP]
>UniRef100_Q3V6B8 RNA polymerase beta'' subunit (Fragment) n=2 Tax=Orontioideae
RepID=Q3V6B8_9ARAE
Length = 87
Score = 65.9 bits (159), Expect = 1e-09
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = -2
Query: 305 LRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKIIRGR 147
LRGRIDWLKGLKEN+VLGGIIPVGTGFKK+ S ++ + ++ + G+
Sbjct: 1 LRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHNSRQHKNIHLEIKKKNLFEGK 53
[141][TOP]
>UniRef100_C1IXE7 DNA-directed RNA polymerase n=1 Tax=Picea sitchensis
RepID=C1IXE7_PICSI
Length = 1218
Score = 65.5 bits (158), Expect = 2e-09
Identities = 30/34 (88%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGGIIP GTG
Sbjct: 1131 ARVLAKAALQGRIDWLKGLKENVILGGIIPAGTG 1164
[142][TOP]
>UniRef100_B7ZIN6 DNA-directed RNA polymerase n=1 Tax=Keteleeria davidiana
RepID=B7ZIN6_KETDA
Length = 1222
Score = 65.5 bits (158), Expect = 2e-09
Identities = 30/34 (88%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGGIIP GTG
Sbjct: 1135 ARVLAKAALQGRIDWLKGLKENVILGGIIPAGTG 1168
[143][TOP]
>UniRef100_A0T0Q9 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Thalassiosira
pseudonana RepID=RPOC2_THAPS
Length = 1446
Score = 65.5 bits (158), Expect = 2e-09
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGD--RSSARQDTKITLETIKI 159
RVL KAA+ GR+DWL+GLKEN+++G +IP GTG++ + A+ TKI LE IKI
Sbjct: 1387 RVLTKAAIEGRVDWLRGLKENIIIGHLIPSGTGYQSYSNCFNQLAQSKTKINLEKIKI 1444
[144][TOP]
>UniRef100_Q3V6B6 RNA polymerase beta'' subunit (Fragment) n=2 Tax=Symplocarpus
RepID=Q3V6B6_9ARAE
Length = 87
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/53 (54%), Positives = 39/53 (73%)
Frame = -2
Query: 305 LRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKIIRGR 147
LRGRIDWLKGLKEN+VLGGIIPVGTGF+K+ S ++ + ++ + G+
Sbjct: 1 LRGRIDWLKGLKENVVLGGIIPVGTGFQKLVHNSRQHKNIHLEIKKKNLFEGK 53
[145][TOP]
>UniRef100_C8CSS3 RNA polymerase beta'' chain n=1 Tax=Pinus monticola
RepID=C8CSS3_PINMO
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[146][TOP]
>UniRef100_C8CSP6 RNA polymerase beta'' chain n=1 Tax=Pinus monticola
RepID=C8CSP6_PINMO
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[147][TOP]
>UniRef100_C8CSM0 RNA polymerase beta'' chain n=1 Tax=Pinus monticola
RepID=C8CSM0_PINMO
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[148][TOP]
>UniRef100_C8CSJ3 RNA polymerase beta'' chain n=1 Tax=Pinus monticola
RepID=C8CSJ3_PINMO
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[149][TOP]
>UniRef100_C8CSG5 RNA polymerase beta'' chain n=1 Tax=Pinus monticola
RepID=C8CSG5_PINMO
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[150][TOP]
>UniRef100_C8CSD8 RNA polymerase beta'' chain n=1 Tax=Pinus monticola
RepID=C8CSD8_PINMO
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[151][TOP]
>UniRef100_C8CSB1 RNA polymerase beta'' chain n=1 Tax=Pinus monticola
RepID=C8CSB1_PINMO
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[152][TOP]
>UniRef100_C8CS82 RNA polymerase beta'' chain n=1 Tax=Pinus monticola
RepID=C8CS82_PINMO
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[153][TOP]
>UniRef100_C8CS55 RNA polymerase beta'' chain (Fragment) n=1 Tax=Pinus monticola
RepID=C8CS55_PINMO
Length = 742
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 653 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 686
[154][TOP]
>UniRef100_C8CS28 RNA polymerase beta'' chain n=1 Tax=Pinus monticola
RepID=C8CS28_PINMO
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[155][TOP]
>UniRef100_C3W2H9 DNA-directed RNA polymerase n=1 Tax=Pinus pinaster RepID=C3W2H9_PINPS
Length = 1228
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1136 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1169
[156][TOP]
>UniRef100_C3W2B4 DNA-directed RNA polymerase n=1 Tax=Pinus peuce RepID=C3W2B4_PINPE
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[157][TOP]
>UniRef100_C3W251 DNA-directed RNA polymerase n=1 Tax=Pinus parviflora var. pentaphylla
RepID=C3W251_PINPR
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[158][TOP]
>UniRef100_C3W1Y9 DNA-directed RNA polymerase n=1 Tax=Pinus monticola
RepID=C3W1Y9_PINMO
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[159][TOP]
>UniRef100_C3W1T2 DNA-directed RNA polymerase n=1 Tax=Pinus merkusii RepID=C3W1T2_9CONI
Length = 1224
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1134 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1167
[160][TOP]
>UniRef100_C3W1E9 DNA-directed RNA polymerase n=1 Tax=Pinus lambertiana
RepID=C3W1E9_PINLA
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[161][TOP]
>UniRef100_C3W184 DNA-directed RNA polymerase n=1 Tax=Pinus flexilis RepID=C3W184_9CONI
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[162][TOP]
>UniRef100_C3W123 DNA-directed RNA polymerase n=1 Tax=Pinus leiophylla var. chihuahuana
RepID=C3W123_PINLE
Length = 1220
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1130 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1163
[163][TOP]
>UniRef100_C3W0W5 DNA-directed RNA polymerase n=1 Tax=Pinus cembra RepID=C3W0W5_PINCE
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[164][TOP]
>UniRef100_C3W0J8 DNA-directed RNA polymerase n=1 Tax=Pinus canariensis
RepID=C3W0J8_9CONI
Length = 1224
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1134 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1167
[165][TOP]
>UniRef100_C3W0D5 DNA-directed RNA polymerase n=1 Tax=Pinus banksiana
RepID=C3W0D5_PINBN
Length = 1222
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1130 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1163
[166][TOP]
>UniRef100_C3W072 DNA-directed RNA polymerase n=1 Tax=Pinus ayacahuite
RepID=C3W072_9CONI
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[167][TOP]
>UniRef100_C3W013 DNA-directed RNA polymerase n=1 Tax=Pinus attenuata
RepID=C3W013_PINAT
Length = 1220
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1130 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1163
[168][TOP]
>UniRef100_C3VZV1 DNA-directed RNA polymerase n=1 Tax=Pinus armandii RepID=C3VZV1_PINAR
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[169][TOP]
>UniRef100_C3VZH0 DNA-directed RNA polymerase n=1 Tax=Pinus albicaulis
RepID=C3VZH0_9CONI
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[170][TOP]
>UniRef100_C3VZ57 DNA-directed RNA polymerase n=1 Tax=Pinus torreyana subsp. torreyana
RepID=C3VZ57_PINTO
Length = 1220
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1130 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1163
[171][TOP]
>UniRef100_C3VYZ4 DNA-directed RNA polymerase n=1 Tax=Pinus torreyana subsp. insularis
RepID=C3VYZ4_PINTO
Length = 1220
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1130 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1163
[172][TOP]
>UniRef100_C3VYS8 DNA-directed RNA polymerase n=1 Tax=Pinus thunbergii
RepID=C3VYS8_PINTH
Length = 1224
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1134 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1167
[173][TOP]
>UniRef100_C3VYK9 DNA-directed RNA polymerase n=1 Tax=Pinus taeda RepID=C3VYK9_PINTA
Length = 1220
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1130 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1163
[174][TOP]
>UniRef100_C3VYF0 DNA-directed RNA polymerase n=1 Tax=Pinus strobus RepID=C3VYF0_PINST
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[175][TOP]
>UniRef100_C3VY86 DNA-directed RNA polymerase n=1 Tax=Pinus squamata RepID=C3VY86_9CONI
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[176][TOP]
>UniRef100_C3VY30 DNA-directed RNA polymerase n=1 Tax=Pinus sibirica RepID=C3VY30_PINSI
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[177][TOP]
>UniRef100_C3VXU5 DNA-directed RNA polymerase n=1 Tax=Pinus resinosa RepID=C3VXU5_PINRE
Length = 1224
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1134 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1167
[178][TOP]
>UniRef100_C3VXL0 DNA-directed RNA polymerase n=1 Tax=Pinus ponderosa
RepID=C3VXL0_PINPO
Length = 1220
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1130 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1163
[179][TOP]
>UniRef100_C3TS82 DNA-directed RNA polymerase n=1 Tax=Pinus krempfii RepID=C3TS82_PINKR
Length = 1207
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[180][TOP]
>UniRef100_C1IXS7 DNA-directed RNA polymerase n=1 Tax=Pinus gerardiana
RepID=C1IXS7_PINGE
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[181][TOP]
>UniRef100_C1IXK9 DNA-directed RNA polymerase n=1 Tax=Pinus contorta RepID=C1IXK9_PINCO
Length = 1222
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1130 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1163
[182][TOP]
>UniRef100_P41606 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Pinus thunbergii
RepID=RPOC2_PINTH
Length = 1224
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1134 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1167
[183][TOP]
>UniRef100_Q85X62 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Pinus koraiensis
RepID=RPOC2_PINKO
Length = 1209
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRIDWLKGLKEN++LGG+IP GTG
Sbjct: 1120 ARVLAKAALQGRIDWLKGLKENVILGGMIPAGTG 1153
[184][TOP]
>UniRef100_P06274 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Marchantia
polymorpha RepID=RPOC2_MARPO
Length = 1386
Score = 64.3 bits (155), Expect = 4e-09
Identities = 27/37 (72%), Positives = 35/37 (94%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKI 216
RVLAKAAL+GRIDWLKGLKEN++LGG++P GTG +++
Sbjct: 1288 RVLAKAALKGRIDWLKGLKENVILGGLVPAGTGSQEV 1324
[185][TOP]
>UniRef100_Q8WI26 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Psilotum nudum
RepID=RPOC2_PSINU
Length = 1408
Score = 63.9 bits (154), Expect = 5e-09
Identities = 26/37 (70%), Positives = 35/37 (94%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKI 216
RVLA+AA+RGRIDWLKGLKEN+++GGI+P GTG +++
Sbjct: 1312 RVLARAAIRGRIDWLKGLKENVIIGGIVPTGTGSREV 1348
[186][TOP]
>UniRef100_A2T322 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Angiopteris evecta
RepID=RPOC2_ANGEV
Length = 1414
Score = 58.9 bits (141), Expect(2) = 8e-09
Identities = 25/37 (67%), Positives = 33/37 (89%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKI 216
RVLA+AAL+GRIDWLKGLKEN+V G ++P GTG +++
Sbjct: 1318 RVLARAALQGRIDWLKGLKENVVPGSVVPTGTGSREV 1354
Score = 24.3 bits (51), Expect(2) = 8e-09
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 208 VQAQDKIPRLPWKQ*KLFEVEIRDISFYH 122
++ + ++ L K K+F +IRDI FYH
Sbjct: 1360 IEKRKELGLLKTKNNKIFIRKIRDIFFYH 1388
[187][TOP]
>UniRef100_UPI0000191AF7 RNA polymerase beta'''''''' chain n=1 Tax=Adiantum capillus-veneris
RepID=UPI0000191AF7
Length = 1420
Score = 62.0 bits (149), Expect = 2e-08
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKI 216
RVLAKAALRGRIDWLKGLKEN+V+G +PVGTG +I
Sbjct: 1322 RVLAKAALRGRIDWLKGLKENVVIGDSVPVGTGSPEI 1358
[188][TOP]
>UniRef100_P23581 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Euglena gracilis
RepID=RPOC2_EUGGR
Length = 830
Score = 62.0 bits (149), Expect = 2e-08
Identities = 29/35 (82%), Positives = 30/35 (85%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFK 222
RVL KAAL+GR DWL GLKENLVLG IIP GTGFK
Sbjct: 795 RVLTKAALQGRADWLSGLKENLVLGNIIPAGTGFK 829
[189][TOP]
>UniRef100_Q85FM9 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Adiantum
capillus-veneris RepID=RPOC2_ADICA
Length = 1420
Score = 62.0 bits (149), Expect = 2e-08
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKI 216
RVLAKAALRGRIDWLKGLKEN+V+G +PVGTG +I
Sbjct: 1322 RVLAKAALRGRIDWLKGLKENVVIGDSVPVGTGSPEI 1358
[190][TOP]
>UniRef100_B2Y1V7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Welwitschia
mirabilis RepID=RPOC2_WELMI
Length = 1297
Score = 61.6 bits (148), Expect = 3e-08
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG----FKKIGDRSSARQDTK 183
ARVLAKAA++GRIDWLKGLKEN++L IIP GTG + R +Q+TK
Sbjct: 1233 ARVLAKAAIQGRIDWLKGLKENVILSNIIPAGTGKKTNYSLFARRRRRKQNTK 1285
[191][TOP]
>UniRef100_Q85C71 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Anthoceros
formosae RepID=RPOC2_ANTFO
Length = 1445
Score = 61.6 bits (148), Expect = 3e-08
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKI 216
RVLAKAALRGRIDWLKGLKEN++ GG+I GTG +++
Sbjct: 1345 RVLAKAALRGRIDWLKGLKENVIFGGVISAGTGCQEV 1381
[192][TOP]
>UniRef100_Q5SCY0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Huperzia lucidula
RepID=Q5SCY0_HUPLU
Length = 1788
Score = 60.8 bits (146), Expect = 4e-08
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 6/72 (8%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLE------TI 165
RVLA AA+RGRIDWL+GLKEN+++GG+IP GTG ++I + ++T E +
Sbjct: 1529 RVLAGAAIRGRIDWLRGLKENVIIGGMIPAGTGCEEI--------NLQVTFEKRKEEMNL 1580
Query: 164 KIIRGRN*RYFV 129
K ++ +N +F+
Sbjct: 1581 KTLQTKNNEFFI 1592
[193][TOP]
>UniRef100_B0YPM0 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Aneura mirabilis
RepID=RPOC2_ANEMR
Length = 1376
Score = 60.8 bits (146), Expect = 4e-08
Identities = 29/61 (47%), Positives = 43/61 (70%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKIIRGR 147
RVLA+AAL+GRIDWL+GLKEN+++G IIP GTG +++ + + ++ I L + G
Sbjct: 1281 RVLARAALKGRIDWLRGLKENVIVGEIIPAGTGSEEVIWQRTLEREEDIFLSNREFCFGE 1340
Query: 146 N 144
N
Sbjct: 1341 N 1341
[194][TOP]
>UniRef100_Q9TJ22 RNA polymerase, beta-subunit (Fragment) n=1 Tax=Abies mariesii
RepID=Q9TJ22_ABIMR
Length = 99
Score = 60.1 bits (144), Expect = 8e-08
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRID LKGLKEN++LGGIIP GTG
Sbjct: 12 ARVLAKAALQGRIDRLKGLKENVILGGIIPAGTG 45
[195][TOP]
>UniRef100_Q9TJ18 RNA polymerase, beta-subunit (Fragment) n=12 Tax=Abies
RepID=Q9TJ18_ABIVE
Length = 99
Score = 60.1 bits (144), Expect = 8e-08
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRID LKGLKEN++LGGIIP GTG
Sbjct: 12 ARVLAKAALQGRIDRLKGLKENVILGGIIPAGTG 45
[196][TOP]
>UniRef100_C3VZB5 DNA-directed RNA polymerase n=1 Tax=Abies firma RepID=C3VZB5_ABIFI
Length = 1218
Score = 60.1 bits (144), Expect = 8e-08
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRID LKGLKEN++LGGIIP GTG
Sbjct: 1131 ARVLAKAALQGRIDRLKGLKENVILGGIIPAGTG 1164
[197][TOP]
>UniRef100_B7ZIF3 DNA-directed RNA polymerase n=1 Tax=Ephedra equisetina
RepID=B7ZIF3_EPHEU
Length = 1231
Score = 59.7 bits (143), Expect = 1e-07
Identities = 29/48 (60%), Positives = 36/48 (75%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTK 183
RVLAKAA +GRIDWLKGLKENL+L IP GTG K ++ ++ +TK
Sbjct: 1169 RVLAKAAFQGRIDWLKGLKENLILSSKIPAGTGKWKKKNQKVSKSETK 1216
[198][TOP]
>UniRef100_C6KJ15 DNA-directed RNA polymerase n=1 Tax=Aureoumbra lagunensis
RepID=C6KJ15_9STRA
Length = 1158
Score = 59.3 bits (142), Expect = 1e-07
Identities = 25/41 (60%), Positives = 33/41 (80%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRS 204
R+LA+AA+ GRI+WL+GLKEN++LG +IP GTGFK S
Sbjct: 1110 RILAQAAVEGRIEWLRGLKENVILGRLIPAGTGFKSFNSTS 1150
[199][TOP]
>UniRef100_C3W0R2 DNA-directed RNA polymerase n=1 Tax=Cedrus deodara RepID=C3W0R2_CEDDE
Length = 1214
Score = 59.3 bits (142), Expect = 1e-07
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLAKAAL+GRID LKGLKEN++LGG+IP GTG
Sbjct: 1129 ARVLAKAALQGRIDRLKGLKENVILGGLIPAGTG 1162
[200][TOP]
>UniRef100_O78483 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Guillardia theta
RepID=RPOC2_GUITH
Length = 1286
Score = 57.8 bits (138), Expect = 4e-07
Identities = 23/50 (46%), Positives = 36/50 (72%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKIT 177
RVL +AA+ G+ DWL+GLKEN+++G +IP GTGF ++ + + K+T
Sbjct: 1190 RVLTEAAIEGKADWLRGLKENVIIGRLIPAGTGFNAYNEQHKSSKSMKLT 1239
[201][TOP]
>UniRef100_Q1ACN4 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Chara vulgaris
RepID=RPOC2_CHAVU
Length = 1412
Score = 57.8 bits (138), Expect = 4e-07
Identities = 25/37 (67%), Positives = 32/37 (86%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKI 216
RVL KAA++GR DWLKGLKEN++LG +IP GTG ++I
Sbjct: 1311 RVLTKAAIKGRTDWLKGLKENVILGRLIPAGTGSEEI 1347
[202][TOP]
>UniRef100_B7ZIB6 DNA-directed RNA polymerase n=1 Tax=Gnetum parvifolium
RepID=B7ZIB6_GNEPA
Length = 1317
Score = 57.4 bits (137), Expect = 5e-07
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
ARVLA+AAL+GRIDWL+GLKEN++L +IP GTG
Sbjct: 1228 ARVLARAALQGRIDWLRGLKENVILSNMIPAGTG 1261
[203][TOP]
>UniRef100_B4WNB3 DNA-directed RNA polymerase n=1 Tax=Synechococcus sp. PCC 7335
RepID=B4WNB3_9SYNE
Length = 1321
Score = 56.6 bits (135), Expect = 8e-07
Identities = 24/47 (51%), Positives = 35/47 (74%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDT 186
RVL +AA++G+ DWL+GLKEN+++G +IP GTGF + +S DT
Sbjct: 1203 RVLTEAAIQGKSDWLRGLKENVIIGRLIPAGTGFNAYEEPTSPEVDT 1249
[204][TOP]
>UniRef100_P35018 DNA-directed RNA polymerase subunit beta'' (Fragment) n=1
Tax=Galdieria sulphuraria RepID=RPOC2_GALSU
Length = 85
Score = 56.2 bits (134), Expect = 1e-06
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKK 219
RVL KAA IDWLKGLKEN+++G +IP GTGFK+
Sbjct: 7 RVLTKAAFENHIDWLKGLKENVIIGRLIPAGTGFKQ 42
[205][TOP]
>UniRef100_Q19VA0 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Chlorokybus
atmophyticus RepID=RPOC2_CHLAT
Length = 1396
Score = 56.2 bits (134), Expect = 1e-06
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKK 219
RVL KAA+ G+ DWLKGLKEN+++G +IP GTGF +
Sbjct: 1305 RVLTKAAIEGKTDWLKGLKENVIIGRLIPAGTGFNE 1340
[206][TOP]
>UniRef100_C4FIY5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Sulfurihydrogenibium
yellowstonense SS-5 RepID=C4FIY5_9AQUI
Length = 1318
Score = 55.8 bits (133), Expect = 1e-06
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQD 189
RVLA AA+ G++D LKGLKEN+++GGIIP GTG K+ + + +D
Sbjct: 1267 RVLADAAVEGKVDPLKGLKENVIIGGIIPAGTGIKEYSEVDAVLKD 1312
[207][TOP]
>UniRef100_C6KII9 DNA-directed RNA polymerase n=1 Tax=Aureococcus anophagefferens
RepID=C6KII9_9STRA
Length = 1154
Score = 55.8 bits (133), Expect = 1e-06
Identities = 22/41 (53%), Positives = 32/41 (78%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRS 204
R+L +AA+ G+++WL+GLKEN++LG +IP GTGFK S
Sbjct: 1107 RILTQAAVEGKVEWLRGLKENVILGRLIPAGTGFKAFNSTS 1147
[208][TOP]
>UniRef100_C5XZG9 Putative uncharacterized protein Sb04g009441 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5XZG9_SORBI
Length = 163
Score = 55.8 bits (133), Expect = 1e-06
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGI 246
ARVLAKAALRGRIDWLKGLKEN+VLGG+
Sbjct: 103 ARVLAKAALRGRIDWLKGLKENVVLGGL 130
[209][TOP]
>UniRef100_C3W1R8 DNA-directed RNA polymerase n=1 Tax=Larix occidentalis
RepID=C3W1R8_LAROX
Length = 1222
Score = 55.8 bits (133), Expect = 1e-06
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = -2
Query: 329 ARVLAKAALRGRIDWLKGLKENLVLGGIIPVG 234
ARVLAKAAL+GRID LKGLKEN++LGGIIP G
Sbjct: 1135 ARVLAKAALQGRIDRLKGLKENVILGGIIPAG 1166
[210][TOP]
>UniRef100_A6MVX2 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Rhodomonas salina
RepID=RPOC2_RHDSA
Length = 1303
Score = 55.8 bits (133), Expect = 1e-06
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSA 198
RVL +AA+ G+ DWL+GLKEN+++G +IP GTGF D S +
Sbjct: 1202 RVLTEAAIEGKADWLRGLKENVIIGRLIPAGTGFNSYNDISKS 1244
[211][TOP]
>UniRef100_A0T0D9 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Phaeodactylum
tricornutum RepID=RPOC2_PHATR
Length = 1415
Score = 55.8 bits (133), Expect = 1e-06
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
RVL KAA+ GRIDWL+GLKEN+++G +IP GTG
Sbjct: 1355 RVLTKAAIEGRIDWLRGLKENIIIGHLIPAGTG 1387
[212][TOP]
>UniRef100_Q7NDF7 DNA-directed RNA polymerase subunit beta' n=1 Tax=Gloeobacter
violaceus RepID=RPOC2_GLOVI
Length = 1262
Score = 55.8 bits (133), Expect = 1e-06
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETI 165
RVL +AA+ G+ DWL+GLKEN+++G +IP GTGF + +D ++ +T+
Sbjct: 1187 RVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFNAYEEAEEVIEDDELIDDTL 1240
[213][TOP]
>UniRef100_B7T1S4 DNA-directed RNA polymerase n=1 Tax=Vaucheria litorea
RepID=B7T1S4_VAULI
Length = 1275
Score = 55.5 bits (132), Expect = 2e-06
Identities = 22/41 (53%), Positives = 32/41 (78%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRS 204
++L +AA+RG+ DWL+GLKEN+++G +IP GTGF D S
Sbjct: 1192 KILTEAAIRGKTDWLRGLKENVIVGRLIPAGTGFNTYNDLS 1232
[214][TOP]
>UniRef100_Q110H3 DNA-directed RNA polymerase subunit beta' n=1 Tax=Trichodesmium
erythraeum IMS101 RepID=RPOC2_TRIEI
Length = 1415
Score = 55.5 bits (132), Expect = 2e-06
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSA 198
RVL +AA+ G+ DWL+GLKEN+++G +IP GTGF D SA
Sbjct: 1246 RVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFNAYEDALSA 1288
[215][TOP]
>UniRef100_P48120 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Cyanophora
paradoxa RepID=RPOC2_CYAPA
Length = 1265
Score = 55.5 bits (132), Expect = 2e-06
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRS 204
RVLAKAA+ G+ID L+GLKEN+++G +IP GTGF D +
Sbjct: 1188 RVLAKAAVEGKIDQLRGLKENVIIGNLIPAGTGFSAYNDNA 1228
[216][TOP]
>UniRef100_B8HTV8 DNA-directed RNA polymerase n=1 Tax=Cyanothece sp. PCC 7425
RepID=B8HTV8_CYAP4
Length = 1335
Score = 55.1 bits (131), Expect = 2e-06
Identities = 23/47 (48%), Positives = 34/47 (72%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDT 186
RVL +AA+ G+ DWL+GLKEN+++G +IP GTGF + +S D+
Sbjct: 1203 RVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFNTYEELASGELDS 1249
[217][TOP]
>UniRef100_B0C385 DNA-directed RNA polymerase subunit beta' n=1 Tax=Acaryochloris
marina MBIC11017 RepID=RPOC2_ACAM1
Length = 1330
Score = 55.1 bits (131), Expect = 2e-06
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQD 189
RVL +AA++G+ DWL+GLKEN+++G +IP GTGF D D
Sbjct: 1205 RVLTEAAIQGKSDWLRGLKENVIIGRLIPAGTGFNSYDDGGLGEPD 1250
[218][TOP]
>UniRef100_C1DX82 DNA-directed RNA polymerase n=1 Tax=Sulfurihydrogenibium azorense
Az-Fu1 RepID=C1DX82_SULAA
Length = 1580
Score = 54.7 bits (130), Expect = 3e-06
Identities = 24/52 (46%), Positives = 38/52 (73%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLE 171
RVLA AA+ G++D LKGLKEN+++GG+IP GTG ++ + A ++ + +E
Sbjct: 1527 RVLADAAVEGKVDPLKGLKENVIIGGLIPAGTGIEEYAEVEVALEEKESVIE 1578
[219][TOP]
>UniRef100_B2V7L9 DNA-directed RNA polymerase subunit beta' n=1
Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=RPOC_SULSY
Length = 1579
Score = 54.7 bits (130), Expect = 3e-06
Identities = 24/39 (61%), Positives = 32/39 (82%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGD 210
RVLA AA+ G++D LKGLKEN+++GGIIP GTG K+ +
Sbjct: 1528 RVLADAAVEGKVDPLKGLKENVIIGGIIPAGTGIKEYSE 1566
[220][TOP]
>UniRef100_Q8DL57 DNA-directed RNA polymerase subunit beta' n=1 Tax=Thermosynechococcus
elongatus BP-1 RepID=RPOC2_THEEB
Length = 1324
Score = 54.7 bits (130), Expect = 3e-06
Identities = 22/46 (47%), Positives = 34/46 (73%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQD 189
RVL +AA+ G+ DWL+GLKEN+++G +IP GTGF + S+ ++
Sbjct: 1195 RVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFNSYEESSNGDEE 1240
[221][TOP]
>UniRef100_Q5MZ21 DNA-directed RNA polymerase subunit beta' n=1 Tax=Synechococcus
elongatus PCC 6301 RepID=RPOC2_SYNP6
Length = 1318
Score = 54.7 bits (130), Expect = 3e-06
Identities = 22/35 (62%), Positives = 30/35 (85%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFK 222
RVL +AA+ G+ DWL+GLKEN+++G +IP GTGFK
Sbjct: 1203 RVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFK 1237
[222][TOP]
>UniRef100_Q31N15 DNA-directed RNA polymerase subunit beta' n=1 Tax=Synechococcus
elongatus PCC 7942 RepID=RPOC2_SYNE7
Length = 1318
Score = 54.7 bits (130), Expect = 3e-06
Identities = 22/35 (62%), Positives = 30/35 (85%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFK 222
RVL +AA+ G+ DWL+GLKEN+++G +IP GTGFK
Sbjct: 1203 RVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFK 1237
[223][TOP]
>UniRef100_Q0P3M4 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Ostreococcus tauri
RepID=RPOC2_OSTTA
Length = 1011
Score = 54.7 bits (130), Expect = 3e-06
Identities = 24/33 (72%), Positives = 29/33 (87%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
RVL+KAAL G+IDWL GLKEN++LG +IP GTG
Sbjct: 977 RVLSKAALEGQIDWLTGLKENVILGRLIPAGTG 1009
[224][TOP]
>UniRef100_Q9MUS7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Mesostigma viride
RepID=RPOC2_MESVI
Length = 1223
Score = 54.7 bits (130), Expect = 3e-06
Identities = 22/34 (64%), Positives = 29/34 (85%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGF 225
RVL KAA+ G+ DWL+GLKEN+++G +IP GTGF
Sbjct: 1145 RVLTKAAIEGKTDWLRGLKENVIIGRLIPAGTGF 1178
[225][TOP]
>UniRef100_P58132 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Euglena longa
RepID=RPOC2_ASTLO
Length = 817
Score = 54.7 bits (130), Expect = 3e-06
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = -2
Query: 320 LAKAALRGRIDWLKGLKENLVLGGIIPVGTGFK 222
L KAA+ +IDWL GLKENL+LG +IP+GTGFK
Sbjct: 785 LIKAAIENKIDWLYGLKENLILGNLIPIGTGFK 817
[226][TOP]
>UniRef100_B2XTN4 DNA-directed RNA polymerase n=1 Tax=Heterosigma akashiwo CCMP452
RepID=B2XTN4_HETA4
Length = 1259
Score = 54.3 bits (129), Expect = 4e-06
Identities = 22/34 (64%), Positives = 30/34 (88%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGF 225
RVLA AA++G+ DWL+GLKEN+++G +IP GTGF
Sbjct: 1203 RVLADAAIQGKADWLRGLKENVIIGRLIPAGTGF 1236
[227][TOP]
>UniRef100_B2XT78 DNA-directed RNA polymerase n=1 Tax=Heterosigma akashiwo NIES-293
RepID=B2XT78_HETA2
Length = 1259
Score = 54.3 bits (129), Expect = 4e-06
Identities = 22/34 (64%), Positives = 30/34 (88%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGF 225
RVLA AA++G+ DWL+GLKEN+++G +IP GTGF
Sbjct: 1203 RVLADAAIQGKADWLRGLKENVIIGRLIPAGTGF 1236
[228][TOP]
>UniRef100_P49468 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Odontella sinensis
RepID=RPOC2_ODOSI
Length = 1481
Score = 54.3 bits (129), Expect = 4e-06
Identities = 21/33 (63%), Positives = 29/33 (87%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
RVL KAA+ GR+DWL+GLKEN+++G ++P GTG
Sbjct: 1432 RVLTKAAIEGRVDWLRGLKENIIIGHLMPAGTG 1464
[229][TOP]
>UniRef100_Q9TM34 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Cyanidium
caldarium RepID=RPOC2_CYACA
Length = 1269
Score = 54.3 bits (129), Expect = 4e-06
Identities = 21/44 (47%), Positives = 34/44 (77%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSAR 195
R+L +AA+ G++DWLKGLKEN+++G +IP GTG + ++ S +
Sbjct: 1198 RILTEAAIEGKVDWLKGLKENVIIGRLIPGGTGLISLDNKDSIK 1241
[230][TOP]
>UniRef100_B7JWU8 DNA-directed RNA polymerase n=1 Tax=Cyanothece sp. PCC 8801
RepID=B7JWU8_CYAP8
Length = 1314
Score = 53.5 bits (127), Expect = 7e-06
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSS 201
RVL +AA+ G+ DWL+GLKEN+++G +IP GTGF D S+
Sbjct: 1194 RVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFHLSEDLST 1235
[231][TOP]
>UniRef100_C7QUR5 DNA-directed RNA polymerase, beta'' subunit n=1 Tax=Cyanothece sp.
PCC 8802 RepID=C7QUR5_CYAP0
Length = 1314
Score = 53.5 bits (127), Expect = 7e-06
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSS 201
RVL +AA+ G+ DWL+GLKEN+++G +IP GTGF D S+
Sbjct: 1194 RVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFHLSEDLST 1235
[232][TOP]
>UniRef100_B4VKQ0 DNA-directed RNA polymerase n=1 Tax=Microcoleus chthonoplastes PCC
7420 RepID=B4VKQ0_9CYAN
Length = 1337
Score = 53.5 bits (127), Expect = 7e-06
Identities = 22/42 (52%), Positives = 32/42 (76%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSS 201
RVL +AA+ G+ DWL+GLKEN+++G +IP GTG+ D +S
Sbjct: 1215 RVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGYNAYEDPTS 1256
[233][TOP]
>UniRef100_A0YLV3 DNA-directed RNA polymerase n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0YLV3_9CYAN
Length = 1366
Score = 53.5 bits (127), Expect = 7e-06
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 5/51 (9%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKK-----IGDRSSARQD 189
RVL +AA+ G+ DWL+GLKEN+++G +IP GTGF +GD S D
Sbjct: 1256 RVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFNAYEELGVGDFSLENND 1306
[234][TOP]
>UniRef100_C1KRB0 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1KRB0_9CHLO
Length = 1227
Score = 53.5 bits (127), Expect = 7e-06
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG 228
RVL +AA+ GRIDWL GLKEN++LG +IP GTG
Sbjct: 1192 RVLTRAAVEGRIDWLTGLKENVILGRLIPAGTG 1224
[235][TOP]
>UniRef100_A5GVF0 DNA-directed RNA polymerase subunit beta' n=1 Tax=Synechococcus sp.
RCC307 RepID=RPOC2_SYNR3
Length = 1368
Score = 53.5 bits (127), Expect = 7e-06
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSA 198
RVL +AA+ G+ DWL+GLKEN+++G +IP GTGF ++ A
Sbjct: 1227 RVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFSGFDEQLKA 1269
[236][TOP]
>UniRef100_B1XHW1 DNA-directed RNA polymerase subunit beta' n=1 Tax=Synechococcus sp.
PCC 7002 RepID=RPOC2_SYNP2
Length = 1331
Score = 53.5 bits (127), Expect = 7e-06
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGD 210
RVL +AA+ G+ DWL+GLKEN+++G +IP GTGF D
Sbjct: 1198 RVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFASQND 1236
[237][TOP]
>UniRef100_Q3M5C8 DNA-directed RNA polymerase subunit beta' n=1 Tax=Anabaena variabilis
ATCC 29413 RepID=RPOC2_ANAVT
Length = 1355
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/57 (45%), Positives = 38/57 (66%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKII 156
RVL +AA+ G+ DWL+GLKEN+++G +IP GTG+ D +D TLET ++
Sbjct: 1223 RVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGYNTY-DEPGMLEDYS-TLETTSVL 1277
[238][TOP]
>UniRef100_P22705 DNA-directed RNA polymerase subunit beta' n=1 Tax=Nostoc sp. PCC 7120
RepID=RPOC2_ANASP
Length = 1355
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/57 (45%), Positives = 38/57 (66%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTGFKKIGDRSSARQDTKITLETIKII 156
RVL +AA+ G+ DWL+GLKEN+++G +IP GTG+ D +D TLET ++
Sbjct: 1223 RVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGYNTY-DEPGMLEDYS-TLETTSVL 1277
[239][TOP]
>UniRef100_Q2LQ86 DNA-directed RNA polymerase subunit beta' n=1 Tax=Syntrophus
aciditrophicus SB RepID=RPOC_SYNAS
Length = 1381
Score = 53.1 bits (126), Expect = 9e-06
Identities = 23/51 (45%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Frame = -2
Query: 326 RVLAKAALRGRIDWLKGLKENLVLGGIIPVGTG---FKKIGDRSSARQDTK 183
RVL +A+L G++D+L+GLKEN+++G +IP GTG ++K+G ++ A +D +
Sbjct: 1310 RVLTEASLAGKVDYLRGLKENVIMGRLIPAGTGLVMYRKLGIKTVADEDAE 1360