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[1][TOP]
>UniRef100_A7P7Z8 Chromosome chr3 scaffold_8, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7P7Z8_VITVI
Length = 223
Score = 241 bits (615), Expect = 3e-62
Identities = 133/190 (70%), Positives = 157/190 (82%), Gaps = 4/190 (2%)
Frame = +2
Query: 5 LLHLPLIPPPSPSPWRRHHHTFAATTTITPPRTGWV---QLQSQLGKAVIGSTR-RSIRC 172
+LHLPL +P P HHH +++ T + ++ + L + + V G + ++RC
Sbjct: 1 MLHLPLYHRHAPLP---HHHRRSSSITTSTTKSCPLFRRTLSTAVEVHVAGPHQIATVRC 57
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MAN RRVKMVAKQI+RELSDMLLTDKVLQFAVLPEA+LGADRYLSSLTTI+DV+VSADLQ
Sbjct: 58 MANQRRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEVSADLQ 117
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
VVKVYVSVFGDE+GKEVAIAGLKS AKYVRSELG+R+KLRLTPE+RF+EDES ERGSRVI
Sbjct: 118 VVKVYVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLERGSRVI 177
Query: 533 AILDKIKNEK 562
AILD+IKNEK
Sbjct: 178 AILDRIKNEK 187
[2][TOP]
>UniRef100_B9RG62 Ribosome-binding factor A, putative n=1 Tax=Ricinus communis
RepID=B9RG62_RICCO
Length = 221
Score = 231 bits (589), Expect = 3e-59
Identities = 116/134 (86%), Positives = 131/134 (97%)
Frame = +2
Query: 161 SIRCMANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVS 340
+I+CMANPRRVKMVAKQIQRELSDMLLTDKVLQ+A+LPEA+LGAD+YLSSLTTI+DV+VS
Sbjct: 53 TIKCMANPRRVKMVAKQIQRELSDMLLTDKVLQYAILPEAALGADKYLSSLTTISDVEVS 112
Query: 341 ADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERG 520
DLQVVKVYVSVFGD+RGKEVAIAGLK+ AKYVRSELG+R+KLRLTPE+RF+EDESFERG
Sbjct: 113 TDLQVVKVYVSVFGDDRGKEVAIAGLKAKAKYVRSELGRRMKLRLTPEIRFIEDESFERG 172
Query: 521 SRVIAILDKIKNEK 562
SRV+AILDKIK EK
Sbjct: 173 SRVLAILDKIKAEK 186
[3][TOP]
>UniRef100_O65693 Probable ribosome-binding factor A, chloroplastic n=1
Tax=Arabidopsis thaliana RepID=RBFA_ARATH
Length = 215
Score = 231 bits (589), Expect = 3e-59
Identities = 120/138 (86%), Positives = 130/138 (94%)
Frame = +2
Query: 149 STRRSIRCMANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITD 328
S RR++RCMANPRRVKMVAKQI RELSDMLLTD VLQ AVLPEA+LGADRYLSSLTTI+D
Sbjct: 46 SVRRTVRCMANPRRVKMVAKQIMRELSDMLLTDTVLQHAVLPEAALGADRYLSSLTTISD 105
Query: 329 VQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDES 508
V+VS DLQVVKVYVSVFGD+RGK+VAIAGLKS AKYVRSELGKR+KLRLTPEVRF+EDE+
Sbjct: 106 VEVSNDLQVVKVYVSVFGDDRGKDVAIAGLKSKAKYVRSELGKRMKLRLTPEVRFIEDEA 165
Query: 509 FERGSRVIAILDKIKNEK 562
ERGSRVIAILDKIK EK
Sbjct: 166 MERGSRVIAILDKIKAEK 183
[4][TOP]
>UniRef100_B9H0Z4 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9H0Z4_POPTR
Length = 166
Score = 223 bits (567), Expect = 1e-56
Identities = 114/130 (87%), Positives = 126/130 (96%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MANPRRVKMVAKQIQRELSDMLLTDKVLQ+AVLPEA+LGAD+YLSSLTTI+DV+VSADLQ
Sbjct: 1 MANPRRVKMVAKQIQRELSDMLLTDKVLQYAVLPEAALGADKYLSSLTTISDVEVSADLQ 60
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
VVKVYVSVFGD+RGKEVAIAGLKS AKYVRS+LG+R+KLRLTPE+RF+EDE ERGSRVI
Sbjct: 61 VVKVYVSVFGDDRGKEVAIAGLKSKAKYVRSQLGRRMKLRLTPEIRFIEDEGLERGSRVI 120
Query: 533 AILDKIKNEK 562
AILD+IK EK
Sbjct: 121 AILDRIKAEK 130
[5][TOP]
>UniRef100_Q5VPH3 Os06g0137600 protein n=2 Tax=Oryza sativa RepID=Q5VPH3_ORYSJ
Length = 209
Score = 208 bits (529), Expect = 3e-52
Identities = 110/169 (65%), Positives = 133/169 (78%), Gaps = 4/169 (2%)
Frame = +2
Query: 68 FAATTTITPPRTGWVQLQSQLGKA----VIGSTRRSIRCMANPRRVKMVAKQIQRELSDM 235
F ++PP + + S L A S+ R +RCMA RRV+MVAKQIQREL+DM
Sbjct: 2 FTCRPLVSPPLPRRLAVASPLAPARPPPSSASSLRVVRCMAKERRVRMVAKQIQRELADM 61
Query: 236 LLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAG 415
L D VLQ AVLPEA+LGAD+YLSSLTTI DV++S DLQV KVYVSVFGDERGK+VAIAG
Sbjct: 62 LTRDPVLQRAVLPEAALGADQYLSSLTTIADVELSNDLQVCKVYVSVFGDERGKKVAIAG 121
Query: 416 LKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDKIKNEK 562
LK+ KYVRS++GKR+KLRLTPE+RF+EDES ERGSR++AILDK+K E+
Sbjct: 122 LKAKTKYVRSQIGKRMKLRLTPEIRFIEDESMERGSRILAILDKLKEER 170
[6][TOP]
>UniRef100_C5Z3G4 Putative uncharacterized protein Sb10g002540 n=1 Tax=Sorghum
bicolor RepID=C5Z3G4_SORBI
Length = 207
Score = 206 bits (524), Expect = 1e-51
Identities = 104/138 (75%), Positives = 122/138 (88%)
Frame = +2
Query: 149 STRRSIRCMANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITD 328
S+ R +RCMA RRV+MVAKQIQREL+DML D VLQ AVLPEA+LGADRYLSSLTTI D
Sbjct: 31 SSLRVVRCMAKERRVRMVAKQIQRELADMLTRDPVLQRAVLPEAALGADRYLSSLTTIAD 90
Query: 329 VQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDES 508
V++S DLQV KVYVSVFGDERGK+VAI GLK+ KYVRS++GKR+KLRLTPE+RF+EDES
Sbjct: 91 VELSNDLQVCKVYVSVFGDERGKKVAIEGLKAKTKYVRSQIGKRMKLRLTPEIRFIEDES 150
Query: 509 FERGSRVIAILDKIKNEK 562
ERGSR++AILDK+K E+
Sbjct: 151 MERGSRILAILDKLKEER 168
[7][TOP]
>UniRef100_B6TDG2 Ribosome-binding factor A n=1 Tax=Zea mays RepID=B6TDG2_MAIZE
Length = 206
Score = 205 bits (521), Expect = 2e-51
Identities = 103/138 (74%), Positives = 122/138 (88%)
Frame = +2
Query: 149 STRRSIRCMANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITD 328
S+ R +RCMA RRV+MVAKQIQREL+DML D VLQ AVLPEA+LGADRYLSSLTTI D
Sbjct: 31 SSLRVVRCMAKERRVRMVAKQIQRELADMLTRDPVLQRAVLPEAALGADRYLSSLTTIAD 90
Query: 329 VQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDES 508
V++S DLQV KVYVSVFGDERGK+VAI GLK+ KYVRS++G+R+KLRLTPE+RF+EDES
Sbjct: 91 VELSNDLQVCKVYVSVFGDERGKKVAIEGLKAKTKYVRSQIGRRMKLRLTPEIRFIEDES 150
Query: 509 FERGSRVIAILDKIKNEK 562
ERGSR++AILDK+K E+
Sbjct: 151 MERGSRILAILDKLKEER 168
[8][TOP]
>UniRef100_A9TX16 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TX16_PHYPA
Length = 140
Score = 179 bits (454), Expect = 1e-43
Identities = 87/131 (66%), Positives = 112/131 (85%)
Frame = +2
Query: 170 CMANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADL 349
CMA+PRRVKMV +QI REL+DMLL D VL+ A++PE+ LGAD YLSS+ TITDV++S DL
Sbjct: 3 CMAHPRRVKMVQQQIHRELADMLLHDTVLRQAIVPESGLGADMYLSSMATITDVEISNDL 62
Query: 350 QVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRV 529
QV KV+VS++GDER +EVA+ GLKS AKYVR LGKR+ LR+TP+VRF++DES ERGSRV
Sbjct: 63 QVAKVFVSLYGDEREQEVALEGLKSKAKYVRMGLGKRMSLRMTPDVRFVKDESLERGSRV 122
Query: 530 IAILDKIKNEK 562
+ +LDK+K ++
Sbjct: 123 LELLDKVKKDR 133
[9][TOP]
>UniRef100_C1MHN4 Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MHN4_9CHLO
Length = 160
Score = 152 bits (385), Expect = 1e-35
Identities = 73/133 (54%), Positives = 101/133 (75%)
Frame = +2
Query: 164 IRCMANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSA 343
+ CMANPRRV V +Q++RE+S+ML TDK L+ + PE +G D +S + T+ DV+VS
Sbjct: 1 VTCMANPRRVAKVQQQMRREISNMLQTDKNLRNMISPEERMGVDNVISVMATVADVEVSN 60
Query: 344 DLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGS 523
DLQVVKV+VS+ GDERGK+ AI GLK YVR +GK++ LRLTPE+RF+ D+SFERG
Sbjct: 61 DLQVVKVFVSILGDERGKKNAINGLKKMEGYVRRNIGKKVSLRLTPEIRFVYDDSFERGQ 120
Query: 524 RVIAILDKIKNEK 562
+V A+LD+++ E+
Sbjct: 121 KVSALLDELREER 133
[10][TOP]
>UniRef100_C1EAK4 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EAK4_9CHLO
Length = 252
Score = 150 bits (378), Expect = 8e-35
Identities = 72/133 (54%), Positives = 100/133 (75%)
Frame = +2
Query: 164 IRCMANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSA 343
+ CMAN RRV V +Q++RE+S+M+ TDK L+ V PE +G D +S + T+ DV+VS
Sbjct: 47 VTCMANQRRVAKVQQQMRREISNMMQTDKKLRDMVYPEERMGVDNVMSCMVTVADVEVSG 106
Query: 344 DLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGS 523
DLQVVKV+VS+ GDERGK+ AI GLK YVR +GKR+ LRLTP++RF+ D+SFERG
Sbjct: 107 DLQVVKVFVSILGDERGKKNAINGLKKMEGYVRRNIGKRVSLRLTPDIRFVYDDSFERGQ 166
Query: 524 RVIAILDKIKNEK 562
RV ++LD+++ E+
Sbjct: 167 RVSSLLDELRVER 179
[11][TOP]
>UniRef100_A4S0F7 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus
CCE9901 RepID=A4S0F7_OSTLU
Length = 171
Score = 145 bits (367), Expect = 2e-33
Identities = 71/129 (55%), Positives = 99/129 (76%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA+PRRV+ V +Q++RE+S M+ +DK L+ + PE +G D LS + T+ DV+VS DLQ
Sbjct: 4 MAHPRRVQKVQQQMRREISSMMQSDKNLRAMISPEERMGVDHMLSVMATVADVEVSNDLQ 63
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
VVKVYVS+ GDERGK AI G+K +YVR ++G+R+ LRLTPE+RF+ D+SFERG +V
Sbjct: 64 VVKVYVSILGDERGKNNAIKGMKRMEQYVRRKIGRRMSLRLTPEIRFIYDDSFERGQKVS 123
Query: 533 AILDKIKNE 559
A+LD+I+ E
Sbjct: 124 ALLDEIRLE 132
[12][TOP]
>UniRef100_A8J0V0 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii
RepID=A8J0V0_CHLRE
Length = 196
Score = 125 bits (313), Expect = 3e-27
Identities = 66/136 (48%), Positives = 93/136 (68%)
Frame = +2
Query: 155 RRSIRCMANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQ 334
R + CMA+PRRV VA IQRE+ DM ++D V+Q A+ PE LG D LS++ +ITD
Sbjct: 56 RLEVVCMAHPRRVAKVASAIQREIGDMFVSDPVIQAAICPERKLGDDA-LSAVASITDTY 114
Query: 335 VSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFE 514
VS DLQVVKV+VSV+ D+ GK VA+ L+ YVR +G+R++LRLTPEVRF+ D++ E
Sbjct: 115 VSNDLQVVKVFVSVYSDDYGKRVAMENLQRLEPYVRRLIGQRVRLRLTPEVRFVYDDAEE 174
Query: 515 RGSRVIAILDKIKNEK 562
V ++ + + E+
Sbjct: 175 EADLVARVIGREEVER 190
[13][TOP]
>UniRef100_A5B926 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5B926_VITVI
Length = 731
Score = 113 bits (282), Expect = 1e-23
Identities = 57/64 (89%), Positives = 63/64 (98%)
Frame = +2
Query: 161 SIRCMANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVS 340
++RCMAN RRVKMVAKQI+RELSDMLLTDKVLQFAVLPEA+LGADRYLSSLTTI+DV+VS
Sbjct: 337 TVRCMANQRRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEVS 396
Query: 341 ADLQ 352
ADLQ
Sbjct: 397 ADLQ 400
Score = 106 bits (264), Expect = 1e-21
Identities = 52/65 (80%), Positives = 59/65 (90%)
Frame = +2
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
VVKVYVSVFGDE+GKEVAIAGLKS AKYVRSELG+R+KLRLTPE+RF+EDES ERGSR +
Sbjct: 664 VVKVYVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLERGSRTL 723
Query: 533 AILDK 547
D+
Sbjct: 724 HFQDQ 728
[14][TOP]
>UniRef100_Q3M9Q8 Ribosome-binding factor A n=1 Tax=Anabaena variabilis ATCC 29413
RepID=RBFA_ANAVT
Length = 133
Score = 111 bits (278), Expect = 3e-23
Identities = 59/130 (45%), Positives = 84/130 (64%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV VA+ I+RE+S ML+ + DR + + ++TDV VS DLQ
Sbjct: 1 MATNRRVSRVAELIKREVSQMLIN------------GIKDDRVGTGMVSVTDVDVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K+YVS++G E K +AGLKS +VRSELG R++LR TPEV F+ED S ERG++V+
Sbjct: 49 HAKIYVSIYGTEEAKAETMAGLKSATGFVRSELGARVRLRRTPEVTFIEDRSIERGTKVL 108
Query: 533 AILDKIKNEK 562
+L+K++N +
Sbjct: 109 TLLNKLENAR 118
[15][TOP]
>UniRef100_Q8Z0M8 Ribosome-binding factor A n=1 Tax=Nostoc sp. PCC 7120
RepID=RBFA_ANASP
Length = 133
Score = 111 bits (278), Expect = 3e-23
Identities = 59/130 (45%), Positives = 84/130 (64%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV VA+ I+RE+S ML+ + DR + + ++TDV VS DLQ
Sbjct: 1 MATNRRVSRVAELIKREVSQMLIN------------GIKDDRVGTGMVSVTDVDVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K+YVS++G E K +AGLKS +VRSELG R++LR TPEV F+ED S ERG++V+
Sbjct: 49 HAKIYVSIYGTEEAKAETMAGLKSATGFVRSELGARVRLRRTPEVTFIEDRSIERGTKVL 108
Query: 533 AILDKIKNEK 562
+L+K++N +
Sbjct: 109 TLLNKLENAR 118
[16][TOP]
>UniRef100_Q93LL7 Ribosome-binding factor A n=1 Tax=Nostoc punctiforme PCC 73102
RepID=RBFA_NOSP7
Length = 139
Score = 110 bits (275), Expect = 7e-23
Identities = 59/130 (45%), Positives = 84/130 (64%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV VA+ I+RE+S MLL + DR + + ++TDV VS DLQ
Sbjct: 1 MATNRRVSRVAELIKREVSQMLLN------------GIKDDRVGTGMVSVTDVDVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K+YVS++G + K +AGLKS YVRSELG R++LR TPEV F+ED S ERG++V+
Sbjct: 49 HAKIYVSIYGTDEAKVETMAGLKSATGYVRSELGARVRLRRTPEVIFLEDRSIERGNKVL 108
Query: 533 AILDKIKNEK 562
A+L ++ +++
Sbjct: 109 ALLSQLNHDR 118
[17][TOP]
>UniRef100_B0JRP8 Ribosome-binding factor A n=1 Tax=Microcystis aeruginosa NIES-843
RepID=RBFA_MICAN
Length = 128
Score = 110 bits (275), Expect = 7e-23
Identities = 59/130 (45%), Positives = 86/130 (66%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MAN RRV V+ I+RE+S MLL + + DR + + ++TDV +S DLQ
Sbjct: 1 MANDRRVSRVSSLIKREVSQMLLME------------IKDDRVGAGMVSVTDVDLSHDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS++G+E K +AGLK++A +VR ELG+RI+LR TPEV F+ED S ERG R++
Sbjct: 49 HAKIFVSIYGNEDAKAETMAGLKASAGFVRRELGQRIRLRRTPEVVFLEDSSLERGDRML 108
Query: 533 AILDKIKNEK 562
+LD IK ++
Sbjct: 109 HLLDHIKTDR 118
[18][TOP]
>UniRef100_B9YG79 Ribosome-binding factor A n=1 Tax='Nostoc azollae' 0708
RepID=B9YG79_ANAAZ
Length = 132
Score = 109 bits (272), Expect = 2e-22
Identities = 58/130 (44%), Positives = 85/130 (65%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV VA+ I+RE+S MLL + DR + + ++TDV VS DLQ
Sbjct: 1 MATNRRVSRVAELIKREVSQMLLN------------GIKDDRVGTGMVSVTDVDVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS++G + K +AGLKS YVRSELG R++LR TPEV F+ED S ERG++V+
Sbjct: 49 HAKIFVSIYGTQEAKAETMAGLKSATGYVRSELGARVRLRRTPEVIFVEDRSLERGTKVL 108
Query: 533 AILDKIKNEK 562
++L++++ E+
Sbjct: 109 SLLNQLQQER 118
[19][TOP]
>UniRef100_A0ZC09 Ribosome-binding factor A n=1 Tax=Nodularia spumigena CCY9414
RepID=A0ZC09_NODSP
Length = 142
Score = 107 bits (268), Expect = 5e-22
Identities = 58/130 (44%), Positives = 86/130 (66%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RR+ VA+ I+RE+S MLL + DR + + ++T V VS DLQ
Sbjct: 1 MATNRRISRVAELIKREVSQMLLH------------GIKDDRVGTGMVSVTYVDVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
KVYVS++G E K +AGLKS +VRSELG R++LR TPEV F+ED+S E+G++V+
Sbjct: 49 HAKVYVSIYGTESAKSETMAGLKSATGFVRSELGSRVRLRRTPEVIFIEDDSIEQGNKVL 108
Query: 533 AILDKIKNEK 562
++L+K+++E+
Sbjct: 109 SLLNKLEDER 118
[20][TOP]
>UniRef100_B8HWS1 Ribosome-binding factor A n=1 Tax=Cyanothece sp. PCC 7425
RepID=RBFA_CYAP4
Length = 134
Score = 107 bits (268), Expect = 5e-22
Identities = 56/130 (43%), Positives = 85/130 (65%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV VA+ I+RE+S ML++ + DR S + ++TDV +S DLQ
Sbjct: 1 MATDRRVARVAELIKREISQMLMS------------GIKDDRVGSGMVSVTDVDLSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS++G E + +AGLK+ YVRSELG R++LR TPEV F+ED S ERG++V+
Sbjct: 49 HAKIFVSIYGTEAARAETMAGLKAATGYVRSELGHRVRLRRTPEVVFLEDRSLERGTQVL 108
Query: 533 AILDKIKNEK 562
++L+++ E+
Sbjct: 109 SLLNRLSEER 118
[21][TOP]
>UniRef100_A8YLX0 RbfA protein n=1 Tax=Microcystis aeruginosa PCC 7806
RepID=A8YLX0_MICAE
Length = 130
Score = 107 bits (266), Expect = 8e-22
Identities = 57/130 (43%), Positives = 86/130 (66%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MAN RRV V+ I+RE+S MLL + + DR + + ++TDV +S DLQ
Sbjct: 1 MANDRRVSRVSSLIKREVSQMLLME------------IKDDRVGAGMVSVTDVDLSHDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
+++VS++G++ K +AGLK+ A +VR ELG+RI+LR TPEV F+ED S ERG R++
Sbjct: 49 HARIFVSIYGNKDAKAETMAGLKAAAGFVRRELGQRIRLRRTPEVVFLEDSSLERGDRML 108
Query: 533 AILDKIKNEK 562
+LD IK+++
Sbjct: 109 HLLDHIKSDR 118
[22][TOP]
>UniRef100_Q31RD2 Ribosome-binding factor A n=2 Tax=Synechococcus elongatus
RepID=RBFA_SYNE7
Length = 137
Score = 107 bits (266), Expect = 8e-22
Identities = 57/130 (43%), Positives = 85/130 (65%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV+ VA I+RE+S ML++ + DR + + ++TDV VS DLQ
Sbjct: 1 MATNRRVERVASLIKREVSQMLMS------------GIKDDRVGAGMVSVTDVVVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS++G K + GLKS A YVRSELG+R++LR TPEV F+ED+ ERG++VI
Sbjct: 49 HTKIFVSIYGTPEAKAETMEGLKSAASYVRSELGQRVRLRRTPEVIFVEDKGLERGTQVI 108
Query: 533 AILDKIKNEK 562
++L+++ E+
Sbjct: 109 SLLEQLTRER 118
[23][TOP]
>UniRef100_B4VNG9 Ribosome-binding factor A n=1 Tax=Microcoleus chthonoplastes PCC
7420 RepID=B4VNG9_9CYAN
Length = 132
Score = 106 bits (264), Expect = 1e-21
Identities = 56/130 (43%), Positives = 82/130 (63%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV V+ IQ+E+S MLL D + DR + + ++TDV VS DLQ
Sbjct: 1 MATNRRVSRVSSLIQQEVSQMLLHD------------IKDDRVGAGMVSVTDVDVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K+YVS++G E K +AGL+S +VR ELG+R++LR TPEV F+ED ERG+R++
Sbjct: 49 HAKIYVSIYGTEEAKSETMAGLQSATGFVRRELGRRVRLRRTPEVVFIEDRGLERGARML 108
Query: 533 AILDKIKNEK 562
+L+++ E+
Sbjct: 109 TLLNQLSQER 118
[24][TOP]
>UniRef100_A3ILU2 Ribosome-binding factor A n=1 Tax=Cyanothece sp. CCY0110
RepID=A3ILU2_9CHRO
Length = 130
Score = 104 bits (259), Expect = 5e-21
Identities = 56/127 (44%), Positives = 79/127 (62%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MAN RRV V+ I+RE+S MLL D + DR + + ++TDV +S DLQ
Sbjct: 1 MANSRRVSRVSSLIKREVSQMLLFD------------IKDDRVGAGMVSVTDVDLSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS++G E K + GLKS+ YVR EL +RI+LR PEVRF ED ERG +++
Sbjct: 49 HAKIFVSIYGTEEAKMETMEGLKSSEGYVRKELAQRIRLRRAPEVRFFEDHGIERGDKML 108
Query: 533 AILDKIK 553
+L+KI+
Sbjct: 109 HLLNKIR 115
[25][TOP]
>UniRef100_B4B2H9 Ribosome-binding factor A n=1 Tax=Cyanothece sp. PCC 7822
RepID=B4B2H9_9CHRO
Length = 133
Score = 102 bits (255), Expect = 2e-20
Identities = 54/130 (41%), Positives = 83/130 (63%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV V+ I+RE+S MLL + + DR + + ++TDV VS DLQ
Sbjct: 1 MATDRRVSRVSSLIKREVSQMLLYE------------IKDDRVGAGMVSVTDVDVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS++G E+ K + GL+S+A +VR ELG+RI+LR TPE+ F ED S ERG R +
Sbjct: 49 HAKIFVSIYGTEQAKAETMEGLRSSAGFVRRELGQRIRLRRTPEIVFFEDRSLERGDRTL 108
Query: 533 AILDKIKNEK 562
+L+++++ +
Sbjct: 109 HLLNQLRDTR 118
[26][TOP]
>UniRef100_B1WW94 Ribosome-binding factor A n=1 Tax=Cyanothece sp. ATCC 51142
RepID=RBFA_CYAA5
Length = 129
Score = 102 bits (255), Expect = 2e-20
Identities = 55/127 (43%), Positives = 79/127 (62%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MAN RRV V+ I+RE+S MLL D + DR + + ++TDV +S DLQ
Sbjct: 1 MANSRRVSRVSSLIKREVSQMLLFD------------IKDDRVGAGMVSVTDVDLSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS++G E K + GLKS+ YVR EL +RI+LR PEVRF ED ERG +++
Sbjct: 49 HAKIFVSIYGTEEAKVETMEGLKSSEGYVRKELAQRIRLRRAPEVRFFEDHGIERGDKML 108
Query: 533 AILDKIK 553
+L++I+
Sbjct: 109 HLLNEIR 115
[27][TOP]
>UniRef100_B7KDJ9 Ribosome-binding factor A n=1 Tax=Cyanothece sp. PCC 7424
RepID=RBFA_CYAP7
Length = 131
Score = 102 bits (254), Expect = 2e-20
Identities = 56/130 (43%), Positives = 82/130 (63%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV V+ I+RE+S MLL + DR + + +ITDV VS DLQ
Sbjct: 1 MATDRRVSRVSSLIKREVSQMLLH------------GIKDDRVGAGMVSITDVDVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS++G E+ K + GLKS+ +VR ELG+RI+LR TPEV F+ED S ERG R +
Sbjct: 49 HAKIFVSIYGTEQAKAETMEGLKSSVGFVRRELGQRIRLRRTPEVVFLEDTSLERGDRTL 108
Query: 533 AILDKIKNEK 562
+L+++++ +
Sbjct: 109 HLLNQLQDAR 118
[28][TOP]
>UniRef100_Q110L1 Ribosome-binding factor A n=1 Tax=Trichodesmium erythraeum IMS101
RepID=RBFA_TRIEI
Length = 137
Score = 102 bits (253), Expect = 3e-20
Identities = 54/130 (41%), Positives = 82/130 (63%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RR+ +A I++E+S MLL + +R + ++TDV VS DLQ
Sbjct: 1 MAIARRISRIASLIKQEISQMLLH------------GIKDNRVGIGMVSVTDVDVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
KV+VS++G + + +AGL+S YVRSELGKRI++R TPEV F+ED S ERG+ ++
Sbjct: 49 HAKVFVSIYGSDEVRSQTMAGLRSATGYVRSELGKRIRMRRTPEVIFVEDRSLERGTEIL 108
Query: 533 AILDKIKNEK 562
++L+K+ E+
Sbjct: 109 SLLNKLSQER 118
[29][TOP]
>UniRef100_Q8DIF9 Ribosome-binding factor A n=1 Tax=Thermosynechococcus elongatus
BP-1 RepID=RBFA_THEEB
Length = 126
Score = 102 bits (253), Expect = 3e-20
Identities = 55/130 (42%), Positives = 86/130 (66%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV VA+ I+RE+S +L+ + + +R + + ++TDV+VS DLQ
Sbjct: 1 MATERRVARVAELIKREVSQLLMYE------------IRDERVGAGMVSVTDVEVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS++ E + +AGLK+ + +VR ELG+RI+LR TPEV F+ED S ERGSRV+
Sbjct: 49 HAKIFVSIYSTEEVRRSTMAGLKAASGFVRRELGQRIRLRRTPEVVFIEDRSLERGSRVL 108
Query: 533 AILDKIKNEK 562
A+L++I ++
Sbjct: 109 ALLNQIGQQQ 118
[30][TOP]
>UniRef100_Q4C3Q0 Ribosome-binding factor A n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4C3Q0_CROWT
Length = 147
Score = 101 bits (252), Expect = 3e-20
Identities = 56/127 (44%), Positives = 77/127 (60%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MAN RRV V+ I+RE+S MLL D + DR S + ++T+V VS DLQ
Sbjct: 19 MANSRRVSRVSSLIKREISQMLLFD------------IKDDRVGSGMVSVTNVYVSGDLQ 66
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS++G E K + GLKS+ YVR EL RI+LR PEV F ED ERG +++
Sbjct: 67 HAKIFVSIYGTEEAKIETMEGLKSSEGYVRKELAHRIRLRRAPEVTFFEDHGIERGDKML 126
Query: 533 AILDKIK 553
+LD+I+
Sbjct: 127 HLLDEIR 133
[31][TOP]
>UniRef100_B0CDK8 Ribosome-binding factor A n=1 Tax=Acaryochloris marina MBIC11017
RepID=RBFA_ACAM1
Length = 138
Score = 100 bits (248), Expect = 1e-19
Identities = 56/130 (43%), Positives = 81/130 (62%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV VA+ I+RE+S MLL S+ DR S + ++T V +S DLQ
Sbjct: 1 MATGRRVSRVAELIKREVSQMLLH------------SIKDDRVGSGMISVTAVDLSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS++G + + +AGL+S YVR +LG RI LR TPEV F ED SFE G++V+
Sbjct: 49 HAKIFVSIYGTDEARAETMAGLESATGYVRKQLGHRIHLRRTPEVIFCEDRSFEEGNQVL 108
Query: 533 AILDKIKNEK 562
++L K+ +E+
Sbjct: 109 SLLHKLDHER 118
[32][TOP]
>UniRef100_A0YNW0 Ribosome-binding factor A n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0YNW0_9CYAN
Length = 142
Score = 98.6 bits (244), Expect = 3e-19
Identities = 52/126 (41%), Positives = 80/126 (63%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
M RRV VA I+RE+S +LL + + DR S + +ITDV V+ DLQ
Sbjct: 1 MPTDRRVSRVAALIKREVSQILLQE------------VKDDRVGSGMVSITDVNVAGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
VK++VS++G E ++ + GL++ Y+RS LG+R++LR TPEV F+ED S ERG +++
Sbjct: 49 HVKIFVSIYGTEEARKETMEGLRAATGYIRSSLGQRVRLRRTPEVLFLEDRSLERGDKML 108
Query: 533 AILDKI 550
++L+ I
Sbjct: 109 SLLNHI 114
[33][TOP]
>UniRef100_Q55625 Ribosome-binding factor A n=1 Tax=Synechocystis sp. PCC 6803
RepID=RBFA_SYNY3
Length = 133
Score = 98.6 bits (244), Expect = 3e-19
Identities = 52/126 (41%), Positives = 79/126 (62%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV V+ I+RE+S MLL + + DR + + ++T+V+VS DLQ
Sbjct: 1 MATSRRVSRVSSLIKREVSQMLLHE------------IKDDRVGTGMVSVTEVEVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS++G K +AGL S A +VR ELG+R++LR TPEV F+ED S ERG +++
Sbjct: 49 HAKIFVSIYGSPEAKASTMAGLHSAAPFVRRELGQRMRLRRTPEVSFLEDRSLERGDKIL 108
Query: 533 AILDKI 550
+L+ +
Sbjct: 109 NLLNNL 114
[34][TOP]
>UniRef100_B7K2E7 Ribosome-binding factor A n=2 Tax=Cyanothece RepID=RBFA_CYAP8
Length = 128
Score = 97.4 bits (241), Expect = 6e-19
Identities = 52/128 (40%), Positives = 80/128 (62%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MAN RRV V+ I+RE+S MLL D + DR + + ++T+V VS DLQ
Sbjct: 1 MANSRRVSRVSSLIKREVSQMLLHD------------IKDDRVGAGMVSVTEVDVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
++VS++G E+ + + GLKS+ +VR EL R++LR +PEV F +D S ERG R++
Sbjct: 49 HATIFVSIYGSEQAQAETMEGLKSSTSFVRRELSHRMRLRRSPEVVFRQDHSLERGDRMV 108
Query: 533 AILDKIKN 556
+L++IK+
Sbjct: 109 HLLNQIKD 116
[35][TOP]
>UniRef100_Q2JPS6 Ribosome-binding factor A n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13)
RepID=RBFA_SYNJB
Length = 144
Score = 96.7 bits (239), Expect = 1e-18
Identities = 51/127 (40%), Positives = 82/127 (64%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV VA+ I+RE+S +LL++ + DR + + +I DV+VS DLQ
Sbjct: 1 MATARRVARVAELIKREVSQILLSE------------IKDDRVGAGMVSIVDVEVSNDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
+++VS++GDE + A+ GL + +VR E+G+R+ LR P V F++D S ERGSRV+
Sbjct: 49 NARIFVSIYGDETAQHQAMEGLAAATPFVRREIGQRLSLRRVPTVVFLQDRSLERGSRVL 108
Query: 533 AILDKIK 553
A+L++++
Sbjct: 109 ALLNQLR 115
[36][TOP]
>UniRef100_Q2JW85 Ribosome-binding factor A n=1 Tax=Synechococcus sp. JA-3-3Ab
RepID=RBFA_SYNJA
Length = 149
Score = 96.3 bits (238), Expect = 1e-18
Identities = 51/127 (40%), Positives = 82/127 (64%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV VA+ I+RE+S +LL++ + DR + + +I DV+VS DLQ
Sbjct: 1 MATARRVARVAELIKREVSQILLSE------------IKDDRVGAGMVSIVDVEVSNDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
+++VS++GDE ++ + GL S +VR E+G+R+ LR P V F++D S ERGSRV+
Sbjct: 49 NARIFVSIYGDEAAQQQTMEGLASATPFVRREIGQRLGLRRVPTVVFLQDRSLERGSRVL 108
Query: 533 AILDKIK 553
A+L++++
Sbjct: 109 ALLNQLR 115
[37][TOP]
>UniRef100_B1XLD1 Ribosome-binding factor A n=1 Tax=Synechococcus sp. PCC 7002
RepID=RBFA_SYNP2
Length = 131
Score = 94.7 bits (234), Expect = 4e-18
Identities = 50/127 (39%), Positives = 81/127 (63%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MAN RRV V+ I+RE+S ML+ D + DR + + +IT+V+VS DLQ
Sbjct: 1 MANSRRVSKVSSLIKREVSLMLMQD------------IKDDRVGAGMVSITEVEVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS++G E + + GL+++ +VR LG+RI+LR +PEV F+ED S E G R+I
Sbjct: 49 HAKIFVSIYGSEEARAETMEGLRASQGFVRRTLGQRIRLRRSPEVLFIEDRSLEEGDRMI 108
Query: 533 AILDKIK 553
++++++
Sbjct: 109 HLINQLE 115
[38][TOP]
>UniRef100_A9BCX0 Ribosome-binding factor A n=1 Tax=Prochlorococcus marinus str. MIT
9211 RepID=RBFA_PROM4
Length = 130
Score = 94.4 bits (233), Expect = 5e-18
Identities = 49/130 (37%), Positives = 84/130 (64%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA+ RRV+ V+ I++E+S +LL + +R SS+ TIT+V+VS DLQ
Sbjct: 1 MAHGRRVEKVSALIRKEMSQLLLD------------GIRDERVASSMVTITEVEVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS+FG + +E A +GL++ + ++R ELG+R+++R PE+ F D+ E+GS V+
Sbjct: 49 HCKIFVSIFGQDPKREEAFSGLQAASGFLRGELGRRLQMRRAPEIVFKLDKGMEKGSSVL 108
Query: 533 AILDKIKNEK 562
+L K++ E+
Sbjct: 109 DLLGKLEEER 118
[39][TOP]
>UniRef100_P32731 Ribosome-binding factor A n=1 Tax=Bacillus subtilis
RepID=RBFA_BACSU
Length = 117
Score = 90.9 bits (224), Expect = 6e-17
Identities = 48/125 (38%), Positives = 76/125 (60%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++EL D++ L + +G T+TDV+VS DLQ+ KVY
Sbjct: 4 RANRVGEQMKKELGDIISRK-------LKDPRIG-------FLTVTDVRVSGDLQIAKVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GDE+ +E A+ GL ++RSE+G RI+LR TPE+ F DES + G+R+ ++ +
Sbjct: 50 ISVLGDEKKREEALKGLAKAKGFIRSEIGSRIRLRKTPEIEFEFDESIDYGNRIETLIHE 109
Query: 548 IKNEK 562
+ +EK
Sbjct: 110 LHSEK 114
[40][TOP]
>UniRef100_A5GQM5 Ribosome-binding factor A n=1 Tax=Synechococcus sp. RCC307
RepID=RBFA_SYNR3
Length = 131
Score = 89.4 bits (220), Expect = 2e-16
Identities = 49/130 (37%), Positives = 79/130 (60%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA+ RRV+ VA I+RE+S++L+ + +R + +IT+V V+ DLQ
Sbjct: 1 MAHGRRVERVASMIRREMSELLVN------------GVRDERVNQGMVSITNVVVAGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
KV VS+FG E ++ A+AGL+S A Y+R EL +R+ +R TPE+ F D+ +G V+
Sbjct: 49 HCKVSVSIFGSESEQDQAMAGLRSAAPYLRGELSRRLNMRRTPELVFHHDKGLAQGVEVL 108
Query: 533 AILDKIKNEK 562
+L K++ E+
Sbjct: 109 GLLSKLEEER 118
[41][TOP]
>UniRef100_Q7TTS8 Ribosome-binding factor A n=1 Tax=Synechococcus sp. WH 8102
RepID=RBFA_SYNPX
Length = 134
Score = 89.4 bits (220), Expect = 2e-16
Identities = 46/130 (35%), Positives = 81/130 (62%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV+ VA I++E S++L+ + +R + +IT+V+VS DLQ
Sbjct: 1 MAQGRRVERVAALIRKETSELLIN------------GIRDERVHQGMVSITNVEVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS+FGDE + + GL++ + Y++ ELG+R+++R P+V F D ERG+ V+
Sbjct: 49 HCKIFVSIFGDEASQLQVMEGLQAASGYLKGELGRRLQMRRAPDVVFQLDRGIERGTSVL 108
Query: 533 AILDKIKNEK 562
+L+K+++E+
Sbjct: 109 GLLNKLEDER 118
[42][TOP]
>UniRef100_A7Z4T6 Ribosome-binding factor A n=1 Tax=Bacillus amyloliquefaciens FZB42
RepID=RBFA_BACA2
Length = 117
Score = 89.4 bits (220), Expect = 2e-16
Identities = 48/125 (38%), Positives = 76/125 (60%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++EL D++ L + +G T+TDV+VS DLQ+ KVY
Sbjct: 4 RANRVGEQMKKELGDIISRK-------LKDPRIG-------FLTVTDVRVSGDLQIAKVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV G E+ KE A+ GL+ ++RSE+G RI+LR TPE+ F DES E G+R+ ++ +
Sbjct: 50 ISVLGGEKKKEEALKGLEKAKGFIRSEIGSRIRLRKTPELEFEFDESIEYGNRIETLIHE 109
Query: 548 IKNEK 562
+ ++K
Sbjct: 110 LHSDK 114
[43][TOP]
>UniRef100_A3Z9T1 Ribosome-binding factor A n=1 Tax=Synechococcus sp. RS9917
RepID=A3Z9T1_9SYNE
Length = 136
Score = 89.0 bits (219), Expect = 2e-16
Identities = 46/130 (35%), Positives = 81/130 (62%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV+ VA I+RE S++L+ + +R + +IT+V+VS DLQ
Sbjct: 1 MAPGRRVERVAALIRRETSELLIH------------GIRDERVHQGMVSITEVEVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS++G++ K+ + GLK+ + Y+R ELG+R+++R PEV F D E+G+ V+
Sbjct: 49 HCKIFVSIYGEDADKQNVLEGLKAASGYLRGELGRRLQMRRAPEVVFQLDRGIEKGTTVL 108
Query: 533 AILDKIKNEK 562
+L++++ E+
Sbjct: 109 HLLNRLEEER 118
[44][TOP]
>UniRef100_Q7NE48 Ribosome-binding factor A n=1 Tax=Gloeobacter violaceus
RepID=RBFA_GLOVI
Length = 129
Score = 89.0 bits (219), Expect = 2e-16
Identities = 46/125 (36%), Positives = 76/125 (60%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V + I+RE+SDMLL ++ P G L ++TDV+V+ DL+ K++
Sbjct: 5 RPARVGELIKREVSDMLLRGQIKD----PRVGAG-------LVSVTDVEVTGDLRQAKIF 53
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VS+FG +++ + L +VR E+G RI+LR TPE+ F++D S ERG+R+ ++D+
Sbjct: 54 VSIFGTPEAQKLTMMALAEVTGFVRQEIGHRIRLRYTPEIAFVQDRSLERGARITRLIDE 113
Query: 548 IKNEK 562
I+ E+
Sbjct: 114 IRAEE 118
[45][TOP]
>UniRef100_Q895J7 Ribosome-binding factor A n=1 Tax=Clostridium tetani
RepID=RBFA_CLOTE
Length = 121
Score = 89.0 bits (219), Expect = 2e-16
Identities = 45/125 (36%), Positives = 74/125 (59%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + +++++E+S ++ D D +S++ ++T V V+ D + KVY
Sbjct: 5 RAGRINEEVKKEISSIIRMDL-------------KDPRISAMVSVTKVDVTKDQRYAKVY 51
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VS+FGDE+ KE + LKS++ ++R E+G RIKLR TPE+ D+S E G + +ILDK
Sbjct: 52 VSIFGDEKSKEETLEALKSSSGFIRREVGHRIKLRYTPEIIIQNDDSIEHGMHIDSILDK 111
Query: 548 IKNEK 562
IK +
Sbjct: 112 IKENE 116
[46][TOP]
>UniRef100_Q3AH50 Ribosome-binding factor A n=1 Tax=Synechococcus sp. CC9605
RepID=RBFA_SYNSC
Length = 140
Score = 88.2 bits (217), Expect = 4e-16
Identities = 44/130 (33%), Positives = 83/130 (63%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV+ VA I++E+S++++ + +R + +IT+V+VS DLQ
Sbjct: 1 MAQGRRVERVAALIRKEVSELMIN------------GIRDERVHHGMVSITEVEVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VSVFG+ + ++ + GL++ + ++R ELG+R+++R PEV F D ERG+ V+
Sbjct: 49 HCKIFVSVFGEAQERDQVLEGLQAASGFLRGELGRRLQMRRAPEVVFQLDRGLERGTSVL 108
Query: 533 AILDKIKNEK 562
+L+++++E+
Sbjct: 109 GLLNRLEDER 118
[47][TOP]
>UniRef100_B1KWK6 Ribosome-binding factor A n=1 Tax=Clostridium botulinum A3 str.
Loch Maree RepID=RBFA_CLOBM
Length = 120
Score = 88.2 bits (217), Expect = 4e-16
Identities = 42/90 (46%), Positives = 61/90 (67%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D LS++ ++TDV V+ DL+ KVYVS+FG+E+ KE ++ LKS+ ++R E+G+R+KLR
Sbjct: 27 DPRLSAMVSVTDVDVTKDLKYAKVYVSIFGNEKAKEESLQALKSSVGFIRKEIGRRVKLR 86
Query: 473 LTPEVRFMEDESFERGSRVIAILDKIKNEK 562
TPEV D S ERG + +L IK K
Sbjct: 87 NTPEVIIEVDNSIERGMHIDELLHSIKENK 116
[48][TOP]
>UniRef100_D0CNF4 Ribosome-binding factor A n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CNF4_9SYNE
Length = 140
Score = 87.8 bits (216), Expect = 5e-16
Identities = 44/130 (33%), Positives = 82/130 (63%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV+ VA I++E+S +++ + +R + +IT+V+VS DLQ
Sbjct: 1 MAQGRRVERVAALIRKEVSQLMIN------------GIRDERVHQGMVSITEVEVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VSVFG+ + ++ + GL++ + ++R ELG+R+++R PEV F D ERG+ V+
Sbjct: 49 HCKIFVSVFGEAQERDQVLEGLEAASGFLRGELGRRLQMRRAPEVVFQLDRGLERGTSVL 108
Query: 533 AILDKIKNEK 562
+L+++++E+
Sbjct: 109 GLLNRLEDER 118
[49][TOP]
>UniRef100_A3DE43 Ribosome-binding factor A n=2 Tax=Clostridium thermocellum
RepID=RBFA_CLOTH
Length = 123
Score = 87.4 bits (215), Expect = 7e-16
Identities = 45/120 (37%), Positives = 75/120 (62%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R++ ++++I+RE+SD++ + D LS L +IT+V V+ DL+ KVY
Sbjct: 3 RIERISEEIKREISDIIQNEL-------------KDPRLSKLISITEVNVTKDLRYAKVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VSV G E K ++ GLKS A ++R E+G+R++LR TPE+ F D S ERG+ + ++++
Sbjct: 50 VSVMGSEEEKANSLEGLKSAAGFIRREIGRRVQLRYTPEIHFELDNSIERGAYITKLINE 109
[50][TOP]
>UniRef100_B5IKS8 Ribosome-binding factor A n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5IKS8_9CHRO
Length = 132
Score = 87.0 bits (214), Expect = 9e-16
Identities = 44/124 (35%), Positives = 79/124 (63%)
Frame = +2
Query: 191 VKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVYV 370
++ VA I+RE+S++L+ A + +R + ++T V+V+ DLQ K++V
Sbjct: 1 MERVASLIRREVSELLV------------AGIKDERVAQGMVSVTRVEVAGDLQHCKIHV 48
Query: 371 SVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDKI 550
SV+G + ++ A+AGL+S A YV+ EL +R+K+R TPEV F D E+G+ V+ +L+++
Sbjct: 49 SVYGSDAERQQAMAGLQSAAAYVKGELSRRLKMRRTPEVMFRLDRGLEQGTSVLGLLNRL 108
Query: 551 KNEK 562
+ E+
Sbjct: 109 EEER 112
[51][TOP]
>UniRef100_B1X465 Ribosome-binding factor A n=1 Tax=Paulinella chromatophora
RepID=B1X465_PAUCH
Length = 124
Score = 87.0 bits (214), Expect = 9e-16
Identities = 45/130 (34%), Positives = 79/130 (60%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
M RRV+ VA I+RE S+++ +S+ R + ++T+V+++ DLQ
Sbjct: 1 MVQNRRVERVAALIRREASELI------------SSSIRDRRVHQGMMSVTEVKLAGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS+FG E + + GL+S + +VR ELG+R+KLR TPE+ F D E+G+ VI
Sbjct: 49 HCKIFVSIFGSEEERHQVLTGLQSASAFVRGELGRRLKLRRTPEIVFELDRGIEKGTSVI 108
Query: 533 AILDKIKNEK 562
+L++++ ++
Sbjct: 109 GLLNELEKKR 118
[52][TOP]
>UniRef100_B1II48 Ribosome-binding factor A n=1 Tax=Clostridium botulinum B1 str.
Okra RepID=RBFA_CLOBK
Length = 120
Score = 87.0 bits (214), Expect = 9e-16
Identities = 45/125 (36%), Positives = 75/125 (60%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + +++++E+S+++ D D LS++ ++TDV V+ DL+ KVY
Sbjct: 5 RAGRINEEVKKEVSNIIHNDI-------------KDPRLSAMVSVTDVDVTKDLKYAKVY 51
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VS+FG+E+ KE ++ LKS+ ++R E+G+R+KLR TPEV D S ERG + +L
Sbjct: 52 VSIFGNEKAKEESLQALKSSVGFIRKEIGRRVKLRNTPEVIIEVDNSIERGMHIDELLHS 111
Query: 548 IKNEK 562
IK +
Sbjct: 112 IKENE 116
[53][TOP]
>UniRef100_UPI00017941F1 hypothetical protein CLOSPO_02585 n=1 Tax=Clostridium sporogenes
ATCC 15579 RepID=UPI00017941F1
Length = 120
Score = 86.7 bits (213), Expect = 1e-15
Identities = 41/90 (45%), Positives = 61/90 (67%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D LS++ ++TDV V+ DL+ KVYVS+FG+E+ KE ++ LKS+ ++R E+G+R+KLR
Sbjct: 27 DPRLSAMVSVTDVNVTKDLKYAKVYVSIFGNEKAKEESLQALKSSVGFIRKEIGRRVKLR 86
Query: 473 LTPEVRFMEDESFERGSRVIAILDKIKNEK 562
TPEV D S ERG + +L IK +
Sbjct: 87 NTPEVIIEVDNSIERGMHIDELLHSIKENE 116
[54][TOP]
>UniRef100_Q05VY2 Ribosome-binding factor A n=1 Tax=Synechococcus sp. RS9916
RepID=Q05VY2_9SYNE
Length = 133
Score = 86.7 bits (213), Expect = 1e-15
Identities = 44/130 (33%), Positives = 81/130 (62%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV+ VA I+RE S++L+ + +R + +IT+V+VS DLQ
Sbjct: 1 MAPGRRVERVAALIRRETSELLIN------------GIRDERVHQGMVSITEVEVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS++ +E ++ + GL++ + Y+R ELG+R+++R PEV F D E+G+ V+
Sbjct: 49 HCKIFVSIYSEEEQRQQVLEGLQAASGYLRGELGRRLQMRRAPEVVFQLDRGIEKGTSVL 108
Query: 533 AILDKIKNEK 562
+L+++++E+
Sbjct: 109 NLLNRLEDER 118
[55][TOP]
>UniRef100_Q7VE81 Ribosome-binding factor A n=1 Tax=Prochlorococcus marinus
RepID=RBFA_PROMA
Length = 130
Score = 86.7 bits (213), Expect = 1e-15
Identities = 45/130 (34%), Positives = 81/130 (62%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV+ VA I++E+S++L + R +++ TIT+V+VS DLQ
Sbjct: 1 MAQSRRVEKVAALIRKEMSELLSN------------GIRDQRVNTTMITITEVEVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS++G+E K+ +GL+++ +++ ELG+R+++R PEV F D E+G V+
Sbjct: 49 HCKIFVSIYGNEIQKDEVFSGLEASQSFLKGELGRRLQMRRAPEVVFKLDRGMEKGISVL 108
Query: 533 AILDKIKNEK 562
+L+K++ E+
Sbjct: 109 NLLEKLEAER 118
[56][TOP]
>UniRef100_C3L0B5 Ribosome-binding factor A n=4 Tax=Clostridium botulinum
RepID=RBFA_CLOB6
Length = 120
Score = 86.7 bits (213), Expect = 1e-15
Identities = 45/125 (36%), Positives = 75/125 (60%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + +++++E+S+++ D D LS++ ++TDV V+ DL+ KVY
Sbjct: 5 RAGRINEEVKKEVSNIIHNDI-------------KDPRLSAMVSVTDVNVTKDLKYAKVY 51
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VS+FG+E+ KE ++ LKS+ ++R E+G+R+KLR TPEV D S ERG + +L
Sbjct: 52 VSIFGNEKAKEESLQALKSSVGFIRKEVGRRVKLRNTPEVIIEVDNSIERGMHIDELLHS 111
Query: 548 IKNEK 562
IK +
Sbjct: 112 IKENE 116
[57][TOP]
>UniRef100_A7FVZ2 Ribosome-binding factor A n=3 Tax=Clostridium botulinum A
RepID=RBFA_CLOB1
Length = 120
Score = 86.7 bits (213), Expect = 1e-15
Identities = 45/125 (36%), Positives = 75/125 (60%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + +++++E+S+++ D D LS++ ++TDV V+ DL+ KVY
Sbjct: 5 RAGRINEEVKKEVSNIIHNDI-------------KDPRLSAMVSVTDVNVTKDLKYAKVY 51
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VS+FG+E+ KE ++ LKS+ ++R E+G+R+KLR TPEV D S ERG + +L
Sbjct: 52 VSIFGNEKAKEESLEALKSSVGFIRKEVGRRVKLRNTPEVIIEVDNSIERGMHIDELLHS 111
Query: 548 IKNEK 562
IK +
Sbjct: 112 IKENE 116
[58][TOP]
>UniRef100_B7IUG9 Ribosome-binding factor A n=27 Tax=Bacillus cereus group
RepID=RBFA_BACC2
Length = 118
Score = 86.7 bits (213), Expect = 1e-15
Identities = 48/124 (38%), Positives = 71/124 (57%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++EL D++ + + +G T+TDVQVS DLQ+ KVY
Sbjct: 4 RANRVGEQMKKELGDIISRK-------IKDPRIG-------FVTVTDVQVSGDLQIAKVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GDE KE + GL ++RSE+G+RI+LR TPE+ F DES G R+ +L +
Sbjct: 50 ISVLGDEEQKENTLKGLAKAKGFIRSEIGQRIRLRKTPEITFEFDESIGYGHRIDTLLHE 109
Query: 548 IKNE 559
I +
Sbjct: 110 INKD 113
[59][TOP]
>UniRef100_B0K1D5 Ribosome-binding factor A n=4 Tax=Thermoanaerobacter
RepID=B0K1D5_THEPX
Length = 119
Score = 86.3 bits (212), Expect = 1e-15
Identities = 44/125 (35%), Positives = 75/125 (60%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R ++++++RE+S M+L + D + ++ +ITD++V+ DL+ KVY
Sbjct: 4 RNSRLSEEMKREISKMILEEI-------------KDPRIKAMVSITDIEVTKDLRYAKVY 50
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VS++G E K+ GLKS A Y+R E+G+RIK+R TPE+ F D S E G+ + IL +
Sbjct: 51 VSIYGSEEDKQETFEGLKSAAGYIRHEIGRRIKMRYTPEIIFELDRSIEYGAHISEILKE 110
Query: 548 IKNEK 562
+ ++
Sbjct: 111 LNKQE 115
[60][TOP]
>UniRef100_A5D2S1 Ribosome-binding factor A n=1 Tax=Pelotomaculum thermopropionicum
SI RepID=RBFA_PELTS
Length = 119
Score = 86.3 bits (212), Expect = 1e-15
Identities = 48/124 (38%), Positives = 74/124 (59%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + VA+ I++E+SDML + L + +G TIT V+VS DL+ +Y
Sbjct: 4 RSERVAEAIKKEVSDMLRNE-------LKDPRIG-------FVTITSVEVSKDLRYANIY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
SVFG ++ I LK ++R ELGKRI+LR TPE+ F D+S RGSRV+A++++
Sbjct: 50 ASVFGSPDDQKETIEALKKAQGFIRGELGKRIRLRYTPEITFKLDQSIGRGSRVLALMEE 109
Query: 548 IKNE 559
++ +
Sbjct: 110 VREK 113
[61][TOP]
>UniRef100_C0ZF49 Ribosome-binding factor A n=1 Tax=Brevibacillus brevis NBRC 100599
RepID=RBFA_BREBN
Length = 121
Score = 86.3 bits (212), Expect = 1e-15
Identities = 49/127 (38%), Positives = 77/127 (60%)
Frame = +2
Query: 179 NPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVV 358
N R+ V ++I++ELS +L L + +G T+TDV+VS+DLQ+
Sbjct: 2 NKTRISRVGEEIKKELSLVLQRG-------LKDPRVG-------FVTVTDVEVSSDLQLA 47
Query: 359 KVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAI 538
KV+VS+FG E ++ ++AGL Y+R+E+GKR+KLR P+ F DES + GS++ +I
Sbjct: 48 KVFVSIFGSEEERKASLAGLTKAKGYLRTEIGKRVKLRHIPDFVFKLDESIDYGSKIESI 107
Query: 539 LDKIKNE 559
L +I E
Sbjct: 108 LREISTE 114
[62][TOP]
>UniRef100_A8FDD3 Ribosome-binding factor A n=1 Tax=Bacillus pumilus SAFR-032
RepID=RBFA_BACP2
Length = 116
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/124 (37%), Positives = 74/124 (59%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++EL D+L L + +G T+TDV+VS DLQ+ KVY
Sbjct: 4 RATRVGEQMKKELGDILGRK-------LKDPRIG-------FLTVTDVEVSGDLQIAKVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GDE+ +E + GL Y+RSE+G RI+LR TPE+ F DES + G+R+ +++ +
Sbjct: 50 ISVLGDEKKREETLKGLAKAKGYIRSEIGNRIRLRKTPELHFEFDESVDYGNRIESLIAE 109
Query: 548 IKNE 559
+ +
Sbjct: 110 LNTK 113
[63][TOP]
>UniRef100_Q65JH9 Ribosome-binding factor A n=1 Tax=Bacillus licheniformis ATCC 14580
RepID=RBFA_BACLD
Length = 117
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/125 (37%), Positives = 73/125 (58%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++EL D++ L + +G T+TDV+VS DLQ+ KVY
Sbjct: 4 RATRVGEQMKKELGDIIGRK-------LKDPRIG-------FLTVTDVRVSGDLQIAKVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GDE+ +E + GL ++RSELG RI+LR TPE+ F DES + G+R+ ++ +
Sbjct: 50 ISVLGDEKKREETLKGLAKAKGFIRSELGNRIRLRKTPEIHFEFDESIDYGNRIETLIHE 109
Query: 548 IKNEK 562
+ K
Sbjct: 110 LNANK 114
[64][TOP]
>UniRef100_C7HBW6 Ribosome-binding factor A n=1 Tax=Clostridium thermocellum DSM 2360
RepID=C7HBW6_CLOTM
Length = 123
Score = 85.9 bits (211), Expect = 2e-15
Identities = 44/120 (36%), Positives = 75/120 (62%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R++ ++++I+RE+SD++ + D LS L +IT+V V+ DL+ KVY
Sbjct: 3 RIERISEEIKREISDIIQNEL-------------KDPRLSKLISITEVNVTKDLRYAKVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VSV G + K ++ GLKS A ++R E+G+R++LR TPE+ F D S ERG+ + ++++
Sbjct: 50 VSVMGSKEEKANSLEGLKSAAGFIRREIGRRVQLRYTPEIHFELDNSIERGAYITKLINE 109
[65][TOP]
>UniRef100_C6QMG3 Ribosome-binding factor A n=1 Tax=Geobacillus sp. Y4.1MC1
RepID=C6QMG3_9BACI
Length = 126
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/125 (37%), Positives = 76/125 (60%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++ELSD++ L + +G T+TDV+V+ DLQ KVY
Sbjct: 4 RATRVGEQMKKELSDIIGRK-------LKDPRIG-------FVTVTDVRVTGDLQQAKVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+S+FGDE ++ + GL+ ++RSE+G+RI+LR TPE+ F DES E G+R+ ++ +
Sbjct: 50 ISIFGDEEQRQNTLKGLEKAKGFIRSEIGQRIRLRKTPEIFFEIDESIEYGTRIEQLIRQ 109
Query: 548 IKNEK 562
I E+
Sbjct: 110 ISAER 114
[66][TOP]
>UniRef100_C2WAQ9 Ribosome-binding factor A n=1 Tax=Bacillus cereus Rock3-44
RepID=C2WAQ9_BACCE
Length = 118
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/124 (37%), Positives = 71/124 (57%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++EL D++ + + +G T+TDVQVS DLQ+ KVY
Sbjct: 4 RANRVGEQMKKELGDIISRK-------IKDPRIG-------FVTVTDVQVSGDLQIAKVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GDE KE + GL ++R+E+G+RI+LR TPE+ F DES G R+ +L +
Sbjct: 50 ISVLGDEEQKENTLKGLAKAKGFIRAEIGQRIRLRKTPEITFEFDESIAYGHRIDTLLHE 109
Query: 548 IKNE 559
I +
Sbjct: 110 INKD 113
[67][TOP]
>UniRef100_C2U147 Ribosome-binding factor A n=3 Tax=Bacillus cereus
RepID=C2U147_BACCE
Length = 118
Score = 85.9 bits (211), Expect = 2e-15
Identities = 48/124 (38%), Positives = 71/124 (57%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++EL D +++ K+ V T+TDVQVS DLQ+ KVY
Sbjct: 4 RANRVGEQMKKELGD-IISRKIKDPRV-------------GFVTVTDVQVSGDLQIAKVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GD+ KE + GL ++RSE+G+RI+LR TPE+ F DES G R+ +L +
Sbjct: 50 ISVLGDDEQKESTLKGLAKAKGFIRSEIGQRIRLRKTPEISFEFDESIGYGHRIDTLLHE 109
Query: 548 IKNE 559
I +
Sbjct: 110 INKD 113
[68][TOP]
>UniRef100_B4WMR4 Ribosome-binding factor A n=1 Tax=Synechococcus sp. PCC 7335
RepID=B4WMR4_9SYNE
Length = 114
Score = 85.9 bits (211), Expect = 2e-15
Identities = 41/90 (45%), Positives = 62/90 (68%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
DR + + +ITDV V+ DLQ K++VS++G + K +AGLK+ YVR +LG+R+KLR
Sbjct: 9 DRVGAGMVSITDVDVAGDLQHAKIFVSIYGTDEAKAETMAGLKAAEGYVRRQLGQRMKLR 68
Query: 473 LTPEVRFMEDESFERGSRVIAILDKIKNEK 562
TPEV F ED SF+ + V+ +L++I E+
Sbjct: 69 RTPEVTFKEDRSFDLATNVLNVLNQISAER 98
[69][TOP]
>UniRef100_A3YXC6 Ribosome-binding factor A n=1 Tax=Synechococcus sp. WH 5701
RepID=A3YXC6_9SYNE
Length = 128
Score = 85.9 bits (211), Expect = 2e-15
Identities = 42/121 (34%), Positives = 75/121 (61%)
Frame = +2
Query: 200 VAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVYVSVF 379
+A I+RE+S++L+ + +R + ++T V+V+ DLQ K++VS+F
Sbjct: 1 MASLIRREISELLVN------------GIKDERVSLGMVSVTQVEVAGDLQHCKIFVSIF 48
Query: 380 GDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDKIKNE 559
G + ++ A+AGLKS A +V+ EL +R+ LR TPEV+F+ D ++GS V+ +L ++ E
Sbjct: 49 GTDEDRQTALAGLKSAAPFVKGELARRLNLRRTPEVQFLLDRGLQKGSSVLGLLSQLGEE 108
Query: 560 K 562
+
Sbjct: 109 R 109
[70][TOP]
>UniRef100_Q732R1 Ribosome-binding factor A n=6 Tax=Bacillus cereus RepID=RBFA_BACC1
Length = 118
Score = 85.9 bits (211), Expect = 2e-15
Identities = 49/124 (39%), Positives = 70/124 (56%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++EL D +++ K+ V T+TDVQVS DLQ+ VY
Sbjct: 4 RANRVGEQMKKELGD-IISRKIKDPRV-------------GFVTVTDVQVSGDLQIATVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GDE KE + GL ++RSE+G+RI+LR TPE+ F DES G R+ +L +
Sbjct: 50 ISVLGDEEQKESTLKGLAKAKGFIRSEIGQRIRLRKTPEISFEFDESIGYGHRIDTLLHE 109
Query: 548 IKNE 559
I E
Sbjct: 110 INKE 113
[71][TOP]
>UniRef100_Q063R1 Ribosome-binding factor A n=1 Tax=Synechococcus sp. BL107
RepID=Q063R1_9SYNE
Length = 134
Score = 85.5 bits (210), Expect = 3e-15
Identities = 42/130 (32%), Positives = 80/130 (61%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV+ VA I++E S++L+ + +R + +IT V+V+ DLQ
Sbjct: 1 MAQGRRVERVAALIRKETSELLIN------------GIRDERVHKGMVSITSVEVAGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS+FG+ + + GL++ + Y+R ELG+R+++R PEV+F D E+G+ V+
Sbjct: 49 HCKIFVSIFGEPNDQNEVMEGLEAASGYLRGELGRRLQMRRAPEVKFQLDRGLEKGTSVL 108
Query: 533 AILDKIKNEK 562
+L+++++++
Sbjct: 109 GLLNQLEDQR 118
[72][TOP]
>UniRef100_B7JJ88 Ribosome-binding factor A n=8 Tax=Bacillus cereus group
RepID=RBFA_BACC0
Length = 118
Score = 85.5 bits (210), Expect = 3e-15
Identities = 49/124 (39%), Positives = 70/124 (56%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++EL D +++ K+ V T+TDVQVS DLQ+ VY
Sbjct: 4 RANRVGEQMKKELGD-IISRKIKDPRV-------------GFVTVTDVQVSGDLQIATVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GDE KE + GL ++RSE+G+RI+LR TPE+ F DES G R+ +L +
Sbjct: 50 ISVLGDEEQKENTLKGLAKAKGFIRSEIGQRIRLRKTPEISFEFDESIGYGHRIDTLLHE 109
Query: 548 IKNE 559
I E
Sbjct: 110 INKE 113
[73][TOP]
>UniRef100_B7GG73 Ribosome-binding factor A n=1 Tax=Anoxybacillus flavithermus WK1
RepID=B7GG73_ANOFW
Length = 127
Score = 85.1 bits (209), Expect = 3e-15
Identities = 47/125 (37%), Positives = 74/125 (59%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++ELSD++ L + +G T+TDV+V+ DLQ KVY
Sbjct: 12 RATRVGEQMKKELSDIIGRK-------LKDPRIG-------FVTVTDVRVTGDLQQAKVY 57
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GDE K+ + GL ++RSE+G+RI+LR TPE+ F DE+ + G R+ +++ +
Sbjct: 58 ISVLGDEEQKKNTLKGLAKATGFIRSEIGQRIRLRKTPEIYFEIDETIDYGQRIESLIKQ 117
Query: 548 IKNEK 562
I EK
Sbjct: 118 ISEEK 122
[74][TOP]
>UniRef100_B4ADU5 Ribosome-binding factor A n=1 Tax=Bacillus pumilus ATCC 7061
RepID=B4ADU5_BACPU
Length = 116
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/124 (37%), Positives = 74/124 (59%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++EL D+L L + +G T+TDV+V+ DLQ+ KVY
Sbjct: 4 RATRVGEQMKKELGDILGRK-------LKDPRIG-------FLTVTDVEVTGDLQIAKVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GDE+ +E + GL Y+RSE+G RI+LR TPE+ F DES + G+R+ +++ +
Sbjct: 50 ISVLGDEKKREETLKGLAKAKGYIRSEIGNRIRLRKTPELHFEFDESVDYGNRIESLIAE 109
Query: 548 IKNE 559
+ +
Sbjct: 110 LNTK 113
[75][TOP]
>UniRef100_Q8RA38 Ribosome-binding factor A n=1 Tax=Thermoanaerobacter tengcongensis
RepID=RBFA_THETN
Length = 122
Score = 85.1 bits (209), Expect = 3e-15
Identities = 43/125 (34%), Positives = 75/125 (60%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R +++++++E+S M+L + D + ++ +ITD++V+ DL+ KVY
Sbjct: 7 RSHRLSEELKKEISKMILEEI-------------KDPRIKAMVSITDIEVTKDLRYAKVY 53
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VS++G E K GLKS A Y+R E+G+RIK+R TPE+ F D S E G+++ IL +
Sbjct: 54 VSIYGSEEEKRETFEGLKSAAGYIRHEIGRRIKMRYTPEIIFELDHSIEYGAKISEILKE 113
Query: 548 IKNEK 562
+ ++
Sbjct: 114 LNKQE 118
[76][TOP]
>UniRef100_C3P5L3 Ribosome-binding factor A n=8 Tax=Bacillus anthracis
RepID=RBFA_BACAA
Length = 118
Score = 85.1 bits (209), Expect = 3e-15
Identities = 49/124 (39%), Positives = 70/124 (56%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++EL D +++ K+ V T+TDVQVS DLQ+ VY
Sbjct: 4 RANRVGEQMKKELGD-IISRKIKDPRV-------------GFVTVTDVQVSRDLQIATVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GDE KE + GL ++RSE+G+RI+LR TPE+ F DES G R+ +L +
Sbjct: 50 ISVLGDEEQKENTLKGLAKAKGFIRSEIGQRIRLRKTPEISFEFDESIGYGHRIDTLLHE 109
Query: 548 IKNE 559
I E
Sbjct: 110 INKE 113
[77][TOP]
>UniRef100_B0K9P9 Ribosome-binding factor A n=4 Tax=Thermoanaerobacter
RepID=B0K9P9_THEP3
Length = 119
Score = 84.7 bits (208), Expect = 4e-15
Identities = 43/125 (34%), Positives = 75/125 (60%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R ++++I++E+S M+L + D + ++ +ITD++++ DL+ KVY
Sbjct: 4 RNNRLSEEIKKEISKMILEEI-------------KDPRIKAMVSITDIELTKDLRYAKVY 50
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VS++G+E K GLKS A Y+R E+G+RIK+R TPE+ F D S E G+ + IL +
Sbjct: 51 VSIYGNEEDKRETFEGLKSAAGYIRHEIGRRIKMRYTPEIIFELDHSIEYGAHISEILKE 110
Query: 548 IKNEK 562
+ ++
Sbjct: 111 LNKQE 115
[78][TOP]
>UniRef100_C3BNN7 Ribosome-binding factor A n=1 Tax=Bacillus pseudomycoides DSM 12442
RepID=C3BNN7_9BACI
Length = 117
Score = 84.7 bits (208), Expect = 4e-15
Identities = 46/124 (37%), Positives = 72/124 (58%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++EL +++ + + +G T+TDVQVS DLQ+ KVY
Sbjct: 4 RANRVGEQMKKELGEIISRK-------IKDPRIG-------FVTVTDVQVSGDLQIAKVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GDE+ KE + GL ++R+E+G+RI+LR TPE+ F DES G R+ +L +
Sbjct: 50 ISVLGDEQQKENTLKGLAKAKGFIRAEIGQRIRLRKTPEITFEFDESIAYGHRIDTLLHE 109
Query: 548 IKNE 559
I +
Sbjct: 110 INKD 113
[79][TOP]
>UniRef100_C2YV93 Ribosome-binding factor A n=1 Tax=Bacillus cereus AH1271
RepID=C2YV93_BACCE
Length = 118
Score = 84.7 bits (208), Expect = 4e-15
Identities = 48/124 (38%), Positives = 70/124 (56%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++EL D +++ K+ V T+TDVQVS DLQ+ VY
Sbjct: 4 RANRVGEQMKKELGD-IISRKIKDPRV-------------GFVTVTDVQVSGDLQIATVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GDE KE + GL ++RSE+G+RI+LR TPE+ F DES G R+ +L +
Sbjct: 50 ISVLGDEEQKESTLKGLAKAKGFIRSEIGQRIRLRKTPEISFEFDESIGYGHRIDTLLHQ 109
Query: 548 IKNE 559
I +
Sbjct: 110 INKD 113
[80][TOP]
>UniRef100_C2PIX6 Ribosome-binding factor A n=4 Tax=Bacillus cereus group
RepID=C2PIX6_BACCE
Length = 118
Score = 84.7 bits (208), Expect = 4e-15
Identities = 48/124 (38%), Positives = 70/124 (56%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++EL D +++ K+ V T+TDVQVS DLQ+ VY
Sbjct: 4 RANRVGEQMKKELGD-IISRKIKDPRV-------------GFVTVTDVQVSGDLQIATVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GDE KE + GL ++RSE+G+RI+LR TPE+ F DES G R+ +L +
Sbjct: 50 ISVLGDEEQKESTLKGLAKAKGFIRSEIGQRIRLRKTPEISFEFDESIGYGHRIDTLLHQ 109
Query: 548 IKNE 559
I +
Sbjct: 110 INKD 113
[81][TOP]
>UniRef100_A4IMD9 Ribosome-binding factor A n=2 Tax=Geobacillus RepID=RBFA_GEOTN
Length = 128
Score = 84.7 bits (208), Expect = 4e-15
Identities = 47/124 (37%), Positives = 75/124 (60%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++ELSD++ L + +G T+TDV+V+ DLQ KVY
Sbjct: 4 RATRVGEQMKKELSDIIGRK-------LKDPRIG-------FVTVTDVRVTGDLQQAKVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SVFGD+ +E + L+ ++RSE+G+RI+LR TPE+ F DE+ E GSR+ ++ +
Sbjct: 50 ISVFGDDEQRENTLKALEKAKGFIRSEIGQRIRLRKTPEILFEIDETIEYGSRIERLIRQ 109
Query: 548 IKNE 559
I +E
Sbjct: 110 ISDE 113
[82][TOP]
>UniRef100_B7HLE4 Ribosome-binding factor A n=3 Tax=Bacillus cereus RepID=RBFA_BACC7
Length = 118
Score = 84.7 bits (208), Expect = 4e-15
Identities = 48/124 (38%), Positives = 70/124 (56%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++EL D +++ K+ V T+TDVQVS DLQ+ VY
Sbjct: 4 RANRVGEQMKKELGD-IISRKIKDPRV-------------GFVTVTDVQVSGDLQIATVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GDE K+ + GL ++RSE+G+RI+LR TPE+ F DES G R+ +L +
Sbjct: 50 ISVLGDEEQKDSTLKGLAKAKGFIRSEIGQRIRLRKTPEISFEFDESIGYGHRIDTLLHE 109
Query: 548 IKNE 559
I E
Sbjct: 110 INKE 113
[83][TOP]
>UniRef100_C4FYS4 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC
49176 RepID=C4FYS4_ABIDE
Length = 128
Score = 84.3 bits (207), Expect = 6e-15
Identities = 42/87 (48%), Positives = 62/87 (71%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D +SSLT++TDV+V+ DL+ KV+VSV GDE+ ++ + GLKS Y+RS+L K I LR
Sbjct: 29 DPRVSSLTSVTDVEVAPDLKTAKVFVSVLGDEKKQKDTLEGLKSAMPYLRSQLAKSINLR 88
Query: 473 LTPEVRFMEDESFERGSRVIAILDKIK 553
TPE+RF D S E G + A+++++K
Sbjct: 89 NTPELRFHLDTSIEYGMHMSALINQVK 115
[84][TOP]
>UniRef100_C3APB0 Ribosome-binding factor A n=2 Tax=Bacillus mycoides
RepID=C3APB0_BACMY
Length = 111
Score = 84.3 bits (207), Expect = 6e-15
Identities = 40/81 (49%), Positives = 56/81 (69%)
Frame = +2
Query: 317 TITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFM 496
T+TDVQVS DLQ+ KVY+SV GDE+ KE + GL ++R+E+G+RI+LR TPE+ F
Sbjct: 26 TVTDVQVSGDLQIAKVYISVLGDEQQKENTLKGLAKAKGFIRAEIGQRIRLRKTPEITFE 85
Query: 497 EDESFERGSRVIAILDKIKNE 559
DES G R+ +L +I +
Sbjct: 86 FDESIAYGHRIDTLLHEINKD 106
[85][TOP]
>UniRef100_A0RHI2 Ribosome-binding factor A n=8 Tax=Bacillus cereus group
RepID=RBFA_BACAH
Length = 118
Score = 84.3 bits (207), Expect = 6e-15
Identities = 48/124 (38%), Positives = 70/124 (56%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++EL D +++ K+ V T+TDVQVS DLQ+ VY
Sbjct: 4 RANRVGEQMKKELGD-IISRKIKDPRV-------------GFVTVTDVQVSGDLQIATVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GDE KE + GL ++RSE+G+RI+LR TPE+ F DES G R+ +L +
Sbjct: 50 ISVLGDEEQKENTLKGLAKAKGFIRSEIGQRIRLRKTPEISFEFDESIGYGHRIDTLLHQ 109
Query: 548 IKNE 559
I +
Sbjct: 110 INKD 113
[86][TOP]
>UniRef100_Q3B014 Ribosome-binding factor A n=1 Tax=Synechococcus sp. CC9902
RepID=RBFA_SYNS9
Length = 134
Score = 84.0 bits (206), Expect = 7e-15
Identities = 41/130 (31%), Positives = 80/130 (61%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV+ VA I++E S++L+ + +R + +IT V+V+ DLQ
Sbjct: 1 MAQGRRVERVAALIRKETSELLIN------------GIRDERVHKGMVSITSVEVAGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS+FG+ + + GL++ + ++R ELG+R+++R PEV+F D E+G+ V+
Sbjct: 49 HCKIFVSIFGEPNDQNEVMEGLEAASGFLRGELGRRLQMRRAPEVKFQLDRGLEKGTSVL 108
Query: 533 AILDKIKNEK 562
+L+++++++
Sbjct: 109 GLLNQLEDQR 118
[87][TOP]
>UniRef100_Q8EQT9 Ribosome-binding factor A n=1 Tax=Oceanobacillus iheyensis
RepID=RBFA_OCEIH
Length = 113
Score = 84.0 bits (206), Expect = 7e-15
Identities = 46/118 (38%), Positives = 71/118 (60%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R +A+Q+++EL + +L+ K+ V T+TDV+V+ DLQ KVY
Sbjct: 5 RAHRIAEQMKKELGE-ILSRKIKDPRV-------------GFVTVTDVEVTGDLQQAKVY 50
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAIL 541
+SV GDE+ K+ + GL ++RSE+G RI+LR TPE+ F DE+ E+G+R+ IL
Sbjct: 51 ISVLGDEKKKQDTLLGLSKAKGFIRSEIGNRIRLRKTPEITFEFDEALEQGNRIETIL 108
[88][TOP]
>UniRef100_C5D9D1 Ribosome-binding factor A n=1 Tax=Geobacillus sp. WCH70
RepID=RBFA_GEOSW
Length = 126
Score = 84.0 bits (206), Expect = 7e-15
Identities = 47/124 (37%), Positives = 74/124 (59%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++ELSD++ L + +G T+TDV+V+ DLQ KVY
Sbjct: 4 RATRVGEQMKKELSDIIGRK-------LKDPRIG-------FVTVTDVRVTGDLQQAKVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GDE ++ + GL+ ++RSE+G+RI+LR TPE+ F DES E G+R+ ++ +
Sbjct: 50 ISVLGDEEQRQNTLKGLEKAKGFIRSEIGQRIRLRKTPEIFFEIDESIEYGNRIEQLIRQ 109
Query: 548 IKNE 559
I E
Sbjct: 110 ISTE 113
[89][TOP]
>UniRef100_A7GRE1 Ribosome-binding factor A n=1 Tax=Bacillus cytotoxicus NVH 391-98
RepID=RBFA_BACCN
Length = 118
Score = 84.0 bits (206), Expect = 7e-15
Identities = 48/124 (38%), Positives = 70/124 (56%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++EL D +++ K+ V T+TDV+VS DLQ+ VY
Sbjct: 4 RANRVGEQMKKELGD-IISRKIKDPRV-------------GFVTVTDVKVSGDLQIATVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GDE KE + GL ++RSE+G+RI+LR TPE+ F DES G R+ +L +
Sbjct: 50 ISVLGDEEQKENTLKGLAKAKGFIRSEIGQRIRLRKTPEISFEFDESIGYGHRIDTLLHE 109
Query: 548 IKNE 559
I E
Sbjct: 110 INKE 113
[90][TOP]
>UniRef100_C6P7U6 Ribosome-binding factor A n=1 Tax=Thermoanaerobacterium
thermosaccharolyticum DSM 571 RepID=C6P7U6_CLOTS
Length = 119
Score = 83.6 bits (205), Expect = 1e-14
Identities = 46/123 (37%), Positives = 78/123 (63%), Gaps = 3/123 (2%)
Frame = +2
Query: 200 VAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVYVSVF 379
++++I++E+S M+ + D +S++T+ITD++V+ DL+ K+Y+SV+
Sbjct: 8 LSEEIKKEVSKMIFEEI-------------KDPRISNMTSITDIEVTKDLRYAKIYISVY 54
Query: 380 GDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERG---SRVIAILDKI 550
G++ K+ + GLKS ++R ELGKRIKLR TPE+ F D S E G S+++ LDK
Sbjct: 55 GNDDEKKSTLEGLKSATGFIRHELGKRIKLRYTPELIFEIDNSIEYGAHISKILRELDKQ 114
Query: 551 KNE 559
++E
Sbjct: 115 ESE 117
[91][TOP]
>UniRef100_Q46HR0 Ribosome-binding factor A n=1 Tax=Prochlorococcus marinus str.
NATL2A RepID=RBFA_PROMT
Length = 123
Score = 83.6 bits (205), Expect = 1e-14
Identities = 42/130 (32%), Positives = 81/130 (62%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MAN RRV+ +A ++RE+S++L+ + +R ++ TIT V+VS DLQ
Sbjct: 1 MANSRRVEKLAALLKREVSELLVN------------GIRDERIHQAMITITSVEVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K+++S+FG+E+ K+ + GL+ ++R+EL +R+++R +PE+ F D+ +G V+
Sbjct: 49 HAKIFISLFGEEKKKDEVLVGLEEAKGFIRAELAQRLQMRRSPELVFKIDKGMTKGPAVL 108
Query: 533 AILDKIKNEK 562
+L+ ++ E+
Sbjct: 109 DLLNALELER 118
[92][TOP]
>UniRef100_A2BZT9 Ribosome-binding factor A n=1 Tax=Prochlorococcus marinus str.
NATL1A RepID=RBFA_PROM1
Length = 123
Score = 83.6 bits (205), Expect = 1e-14
Identities = 41/130 (31%), Positives = 81/130 (62%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MAN RRV+ +A ++RE+S++L+ + +R ++ TIT V+VS DLQ
Sbjct: 1 MANSRRVEKLAALLKREISELLVN------------GIRDERIHQAMITITSVEVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
++++S+FG+E+ K+ + GL+ ++R+EL +R+++R +PE+ F D+ +G V+
Sbjct: 49 HARIFISLFGEEKKKDQVLVGLEEAKGFIRAELARRLQMRRSPELVFKIDKGMTKGPEVL 108
Query: 533 AILDKIKNEK 562
+L+ ++ E+
Sbjct: 109 DLLNALELER 118
[93][TOP]
>UniRef100_A4CQG3 Possible Ribosome-binding factor A n=1 Tax=Synechococcus sp. WH
7805 RepID=A4CQG3_SYNPV
Length = 140
Score = 83.2 bits (204), Expect = 1e-14
Identities = 47/130 (36%), Positives = 75/130 (57%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV+ VA I++E S++L+ + +R L +IT V+VS DLQ
Sbjct: 1 MAPGRRVERVAALIRKETSELLIH------------GIRDERVHQGLISITGVEVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VSV D GK + GL++ + ++R ELG+R+K+R PEV F D E+G+ V+
Sbjct: 49 HCKIFVSVLADPEGKAQVMDGLQAASSFLRGELGRRLKMRRAPEVVFHLDRGLEKGASVL 108
Query: 533 AILDKIKNEK 562
+L ++ E+
Sbjct: 109 GLLGDLERER 118
[94][TOP]
>UniRef100_Q7V4I8 Ribosome-binding factor A n=1 Tax=Prochlorococcus marinus str. MIT
9313 RepID=RBFA_PROMM
Length = 142
Score = 83.2 bits (204), Expect = 1e-14
Identities = 43/130 (33%), Positives = 80/130 (61%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV+ VA I+RE S++L+ + +R + +IT+V+VS DLQ
Sbjct: 1 MAPGRRVERVAALIRRETSELLIH------------GIRDERVHQGMVSITNVEVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS++G+E + + GL++ + ++R ELG+R+++R PEV F D E+G+ V+
Sbjct: 49 HCKIFVSIYGEEIQRSEVLEGLEAASGFLRGELGRRLQMRRAPEVHFHLDRGIEKGTSVL 108
Query: 533 AILDKIKNEK 562
+L++++ ++
Sbjct: 109 NLLEQLEQQR 118
[95][TOP]
>UniRef100_A2CCY5 Ribosome-binding factor A n=1 Tax=Prochlorococcus marinus str. MIT
9303 RepID=RBFA_PROM3
Length = 142
Score = 83.2 bits (204), Expect = 1e-14
Identities = 43/130 (33%), Positives = 80/130 (61%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV+ VA I+RE S++L+ + +R + +IT+V+VS DLQ
Sbjct: 1 MAPGRRVERVAALIRRETSELLIH------------GIRDERVHQGMVSITNVEVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VS++G+E + + GL++ + ++R ELG+R+++R PEV F D E+G+ V+
Sbjct: 49 HCKIFVSIYGEEIQRSEVLEGLEAASGFLRGELGRRLQMRRAPEVHFHLDRGIEKGTSVL 108
Query: 533 AILDKIKNEK 562
+L++++ ++
Sbjct: 109 NLLEQLEQQR 118
[96][TOP]
>UniRef100_Q9KA79 Ribosome-binding factor A n=1 Tax=Bacillus halodurans
RepID=RBFA_BACHD
Length = 116
Score = 83.2 bits (204), Expect = 1e-14
Identities = 48/127 (37%), Positives = 70/127 (55%), Gaps = 3/127 (2%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDML---LTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVV 358
R V +Q+++ELSD+ L D ++F T+T V V+ DLQ
Sbjct: 5 RANRVGEQMKKELSDIFMRELKDPRIEFV-----------------TVTGVDVTGDLQQA 47
Query: 359 KVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAI 538
VY++V GD+ KE +AGL ++RSE+GKRI+LR TPE+ F DES E G+R+ +
Sbjct: 48 NVYITVLGDDEQKEATLAGLSKAKGFIRSEIGKRIRLRKTPELFFHFDESIEYGNRIEKL 107
Query: 539 LDKIKNE 559
L I +
Sbjct: 108 LQDINRD 114
[97][TOP]
>UniRef100_B8I6E8 Ribosome-binding factor A n=1 Tax=Clostridium cellulolyticum H10
RepID=B8I6E8_CLOCE
Length = 117
Score = 82.8 bits (203), Expect = 2e-14
Identities = 45/124 (36%), Positives = 72/124 (58%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R+ +++++++E+S+++ D D L S+ +I V+ DL+ KVY
Sbjct: 4 RIVRISEEVKKEISNIIQNDI-------------KDPRLPSMVSIVSCSVTKDLRYAKVY 50
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VSVFG++ K+ AI+ LKS A ++R ELG R++LR TPE+ F D S E G + +LD
Sbjct: 51 VSVFGNDEQKKNAISALKSAAGFIRRELGHRVQLRYTPEIHFELDTSIEHGFHINKLLDD 110
Query: 548 IKNE 559
K E
Sbjct: 111 AKKE 114
[98][TOP]
>UniRef100_C1PG82 Ribosome-binding factor A n=1 Tax=Bacillus coagulans 36D1
RepID=C1PG82_BACCO
Length = 115
Score = 82.4 bits (202), Expect = 2e-14
Identities = 48/121 (39%), Positives = 73/121 (60%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++ELSD++ L + +G T+TDV+V+ DLQ KVY
Sbjct: 4 RANRVGEQMKKELSDIIGRK-------LKDPRVG-------FVTVTDVEVTGDLQQAKVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
++V GDE K+ + GL+ ++RSE+GKRI+LR TPE+ F DES E G+R+ ++ K
Sbjct: 50 LTVLGDEVQKKDTLDGLEKAKGFIRSEVGKRIRLRKTPELIFEIDESIEYGNRIETLIKK 109
Query: 548 I 550
I
Sbjct: 110 I 110
[99][TOP]
>UniRef100_C9S0C7 Ribosome-binding factor A n=2 Tax=Geobacillus RepID=C9S0C7_9BACI
Length = 127
Score = 82.0 bits (201), Expect = 3e-14
Identities = 45/124 (36%), Positives = 75/124 (60%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++ELSD++ L + +G T+TDV+V+ DLQ KVY
Sbjct: 4 RATRVGEQMKKELSDIISRR-------LKDPRIG-------FVTVTDVRVTGDLQQAKVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GD++ +E + L+ ++RSE+G+RI+LR TPE+ F DE+ E GSR+ ++ +
Sbjct: 50 ISVLGDDKQRENTLKALEKAKGFIRSEIGQRIRLRKTPEIFFEIDETIEYGSRIEQLIRQ 109
Query: 548 IKNE 559
I ++
Sbjct: 110 ISSD 113
[100][TOP]
>UniRef100_A5GNX9 Ribosome-binding factor A n=1 Tax=Synechococcus sp. WH 7803
RepID=RBFA_SYNPW
Length = 140
Score = 82.0 bits (201), Expect = 3e-14
Identities = 46/130 (35%), Positives = 74/130 (56%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV+ VA I++E S++L+ + DR L +IT V VS DLQ
Sbjct: 1 MAPGRRVERVAALIRKETSELLMH------------GIRDDRVHQGLISITQVDVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K++VSV D G+ + GL++ + ++R ELG+R+++R PEV F D E+G+ V+
Sbjct: 49 HCKIFVSVLADPEGRAQVMEGLQAASSFLRGELGRRLQMRRAPEVVFHLDRGLEKGASVL 108
Query: 533 AILDKIKNEK 562
+L ++ E+
Sbjct: 109 GLLGDLERER 118
[101][TOP]
>UniRef100_Q5L0I6 Ribosome-binding factor A n=1 Tax=Geobacillus kaustophilus
RepID=RBFA_GEOKA
Length = 127
Score = 82.0 bits (201), Expect = 3e-14
Identities = 45/124 (36%), Positives = 75/124 (60%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+++ELSD++ L + +G T+TDV+V+ DLQ KVY
Sbjct: 4 RATRVGEQMKKELSDIISRR-------LKDPRIG-------FVTVTDVRVTGDLQQAKVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GD++ +E + L+ ++RSE+G+RI+LR TPE+ F DE+ E GSR+ ++ +
Sbjct: 50 ISVLGDDKQRENTLKALEKAKGFIRSEIGQRIRLRKTPEIFFEIDETMEYGSRIEQLIRQ 109
Query: 548 IKNE 559
I ++
Sbjct: 110 ISSD 113
[102][TOP]
>UniRef100_A7Q501 Chromosome undetermined scaffold_51, whole genome shotgun sequence
n=1 Tax=Vitis vinifera RepID=A7Q501_VITVI
Length = 144
Score = 81.6 bits (200), Expect = 4e-14
Identities = 41/72 (56%), Positives = 54/72 (75%)
Frame = +2
Query: 347 LQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSR 526
L++ + F D + EVAIAG KS +Y+RSEL + +KLRLT E+RF+EDES E+GS
Sbjct: 37 LELHSPFPKSFKDRKRNEVAIAGSKSKVEYIRSELRRHMKLRLTQEIRFIEDESLEQGSW 96
Query: 527 VIAILDKIKNEK 562
VIAILD++KNEK
Sbjct: 97 VIAILDRMKNEK 108
[103][TOP]
>UniRef100_B8CW73 Ribosome-binding factor A n=1 Tax=Halothermothrix orenii H 168
RepID=RBFA_HALOH
Length = 122
Score = 81.6 bits (200), Expect = 4e-14
Identities = 41/126 (32%), Positives = 78/126 (61%)
Frame = +2
Query: 185 RRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKV 364
+R + + + +++E+SD++L + + + +G ++TDV+VS DL+ KV
Sbjct: 4 QRARRLGELLKKEISDIILRE-------VKDPRIG-------FISVTDVEVSNDLRHAKV 49
Query: 365 YVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
+VSV+GDE+ ++ + GL+ Y+R +G+R+K+ TPE+ F D+S E G+R+ +L
Sbjct: 50 FVSVYGDEKERKETMEGLEKATGYIRKLIGERVKVYYTPEILFRYDDSLEHGARINELLK 109
Query: 545 KIKNEK 562
K+K E+
Sbjct: 110 KVKEEE 115
[104][TOP]
>UniRef100_Q5WFU4 Ribosome-binding factor A n=1 Tax=Bacillus clausii KSM-K16
RepID=RBFA_BACSK
Length = 118
Score = 81.6 bits (200), Expect = 4e-14
Identities = 49/130 (37%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MAN R V+ V +Q+++ELSD+L+ D + + + T+T V V+ DLQ
Sbjct: 1 MANNRAVR-VGEQMKKELSDILIRD-------IKDPRV-------RFVTVTGVDVTGDLQ 45
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
+++V GDE ++ +AGL+ ++R+ELGKRI+LR TPE+ F DES + G+R+
Sbjct: 46 QATAFITVLGDEEERKATLAGLEKAKGFIRTELGKRIRLRKTPELSFSFDESIQYGNRIE 105
Query: 533 AIL-DKIKNE 559
++L D KN+
Sbjct: 106 SLLRDLNKND 115
[105][TOP]
>UniRef100_Q0I721 Ribosome-binding factor A n=1 Tax=Synechococcus sp. CC9311
RepID=RBFA_SYNS3
Length = 134
Score = 81.3 bits (199), Expect = 5e-14
Identities = 43/130 (33%), Positives = 79/130 (60%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA RRV+ VA I++E S++L+ + +R + +IT+V+VS DLQ
Sbjct: 1 MAQGRRVERVAALIRKETSELLIH------------GIRDERVHQGMVSITEVEVSGDLQ 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
+++VSVFG++ K+ + GL++ ++R ELG+R+++R PE+ F D E+G+ V+
Sbjct: 49 HCRIFVSVFGEQAQKDEVMDGLEAARGFLRGELGRRLQMRRAPEIVFKLDLGIEKGTTVL 108
Query: 533 AILDKIKNEK 562
+L +++ E+
Sbjct: 109 HLLGELERER 118
[106][TOP]
>UniRef100_Q2B0A7 Ribosome-binding factor A n=1 Tax=Bacillus sp. NRRL B-14911
RepID=Q2B0A7_9BACI
Length = 112
Score = 80.5 bits (197), Expect = 8e-14
Identities = 39/81 (48%), Positives = 55/81 (67%)
Frame = +2
Query: 317 TITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFM 496
T+TDV V+ DLQ VY+SV GDE +E + GL ++RSE+G+RI+LR TPE+ F
Sbjct: 22 TVTDVAVTGDLQQATVYISVLGDEEKRENTLKGLAKAKGFIRSEIGQRIRLRKTPEIIFE 81
Query: 497 EDESFERGSRVIAILDKIKNE 559
DES + G+R+ +L KI+ E
Sbjct: 82 FDESIDYGNRIDTLLHKIQEE 102
[107][TOP]
>UniRef100_A8MFA9 Ribosome-binding factor A n=1 Tax=Alkaliphilus oremlandii OhILAs
RepID=RBFA_ALKOO
Length = 132
Score = 80.5 bits (197), Expect = 8e-14
Identities = 44/124 (35%), Positives = 73/124 (58%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
RVK ++++I++ +SD + + D +SS+T+I +V V+ DL+ V +Y
Sbjct: 5 RVKRLSEEIKKIVSDSIRNEL-------------RDPRISSMTSIVEVDVTRDLRYVNIY 51
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VSV G+E+ K + GL + ++R E+GK+IK R TPEV F DES E+G + ++ K
Sbjct: 52 VSVLGNEKEKADTMEGLTKASGFIRREIGKKIKARYTPEVIFKLDESIEKGIYMYNVITK 111
Query: 548 IKNE 559
+ E
Sbjct: 112 VNEE 115
[108][TOP]
>UniRef100_C6IW05 Ribosome-binding factor A n=1 Tax=Paenibacillus sp. oral taxon 786
str. D14 RepID=C6IW05_9BACL
Length = 117
Score = 80.1 bits (196), Expect = 1e-13
Identities = 48/124 (38%), Positives = 72/124 (58%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +QI++ELS ++ ++ L + +G T+T V V+ DL KVY
Sbjct: 5 RTGRVGEQIKKELSVLIQSE-------LKDPRIG-------FVTVTGVDVTNDLSQAKVY 50
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SVFGDE K ++ GL+ ++R+E+GKRI+LR TPE+ F DES GSR+ +L +
Sbjct: 51 LSVFGDEEQKNESLKGLEKATGFLRTEIGKRIRLRHTPELIFKIDESIAYGSRIEKLLGE 110
Query: 548 IKNE 559
I E
Sbjct: 111 ITQE 114
[109][TOP]
>UniRef100_A8VS65 Putative uncharacterized protein n=1 Tax=Bacillus selenitireducens
MLS10 RepID=A8VS65_9BACI
Length = 115
Score = 80.1 bits (196), Expect = 1e-13
Identities = 45/125 (36%), Positives = 72/125 (57%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +QI++EL+D++ + + +G T+T V V+ DLQ +
Sbjct: 5 RANRVGEQIKKELTDIIQRG-------IKDPRIG-------FVTVTAVDVTGDLQQATAF 50
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
V+V+GD+ +E ++ L+ Y+RSE+GKRIKLR TPE+ F DES ERG+R+ +L
Sbjct: 51 VTVYGDDDEREKSLLALEKANGYIRSEIGKRIKLRKTPELDFKFDESIERGNRIDELLRN 110
Query: 548 IKNEK 562
+ E+
Sbjct: 111 LNKEE 115
[110][TOP]
>UniRef100_C7IIX4 Ribosome-binding factor A n=1 Tax=Clostridium papyrosolvens DSM
2782 RepID=C7IIX4_9CLOT
Length = 117
Score = 79.7 bits (195), Expect = 1e-13
Identities = 44/124 (35%), Positives = 71/124 (57%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R+ +++++++E+S+++ D D L S+ +I V+ DL+ KV+
Sbjct: 4 RIIRISEEVKKEISNIIQNDI-------------KDPRLPSMVSIVSCNVTKDLRYAKVF 50
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VSV G+E K+ AI+ LKS A ++R ELG R++LR TPE+ F D S E G + +LD
Sbjct: 51 VSVLGNEEQKKNAISALKSAAGFIRRELGHRVQLRYTPEIHFELDTSIEHGIHINKLLDD 110
Query: 548 IKNE 559
K E
Sbjct: 111 AKKE 114
[111][TOP]
>UniRef100_Q7XYI2 Ribosome-binding factor A (Fragment) n=1 Tax=Bigelowiella natans
RepID=Q7XYI2_BIGNA
Length = 198
Score = 79.7 bits (195), Expect = 1e-13
Identities = 42/141 (29%), Positives = 83/141 (58%), Gaps = 1/141 (0%)
Frame = +2
Query: 143 IGSTRRSIRCMANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTI 322
+ STRR++ C A+PRR+ V ++IQRE+ D+L+ D+ + A+ P+ R + ++ ++
Sbjct: 51 LSSTRRTVSCGADPRRIGRVGREIQREMGDLLVNDRNVLAAIDPKYDDDDIRNM-TIASV 109
Query: 323 TDVQVSADLQVVKVYVSVF-GDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFME 499
T+VQ+S DL V K+Y+ G ++ + + L + Y+R + +R+ LR +PE+ F E
Sbjct: 110 TEVQMSRDLSVAKLYLMFSGGTKKSYQPILDRLNAKKGYIRRVVSQRLNLRRSPELVFYE 169
Query: 500 DESFERGSRVIAILDKIKNEK 562
D + + I+ ++ ++
Sbjct: 170 DNTLNEADEMKRIMAVLREDR 190
[112][TOP]
>UniRef100_B1I386 Ribosome-binding factor A n=1 Tax=Candidatus Desulforudis
audaxviator MP104C RepID=B1I386_DESAP
Length = 119
Score = 79.3 bits (194), Expect = 2e-13
Identities = 46/121 (38%), Positives = 72/121 (59%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + +A+ I++E+SD+L K + LG T+T V+VS+DL+ KV+
Sbjct: 7 RPERLAEVIKKEISDLLRQMK--------DPRLG-------FVTVTAVEVSSDLRYAKVF 51
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VSV G ++ ++ L+ ++R+ELGKRI+LR TPEV F+ D S E G+R+I I+
Sbjct: 52 VSVLGSNEDQDASLKVLRGAQGFIRTELGKRIRLRYTPEVSFVHDPSIEEGTRIIQIIRD 111
Query: 548 I 550
I
Sbjct: 112 I 112
[113][TOP]
>UniRef100_C6PQW9 Ribosome-binding factor A n=1 Tax=Clostridium carboxidivorans P7
RepID=C6PQW9_9CLOT
Length = 121
Score = 79.3 bits (194), Expect = 2e-13
Identities = 38/90 (42%), Positives = 57/90 (63%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D LS++ ++T V V+ DL+ KVYVS+FGDE K LK +A ++R E+G +I LR
Sbjct: 27 DPRLSAMISVTKVDVTKDLRYAKVYVSIFGDEESKNSTFEALKGSAGFIRREIGHKINLR 86
Query: 473 LTPEVRFMEDESFERGSRVIAILDKIKNEK 562
TPE+ D + E+G + A+L KIK ++
Sbjct: 87 YTPEILIELDNTIEQGMHIDALLHKIKEKE 116
[114][TOP]
>UniRef100_B7ATJ0 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus
ATCC 43243 RepID=B7ATJ0_9BACE
Length = 136
Score = 79.3 bits (194), Expect = 2e-13
Identities = 41/114 (35%), Positives = 68/114 (59%)
Frame = +2
Query: 209 QIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVYVSVFGDE 388
++QRELS+++ + D + +T++ V+V+ DL+ K Y+SV GDE
Sbjct: 18 EVQRELSNIIHNEI-------------KDPRIHPMTSVVTVEVAPDLKTCKAYISVLGDE 64
Query: 389 RGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDKI 550
+ ++ IAGLKS Y+R EL + LR TPE+RF+ D+S E G R+ ++D++
Sbjct: 65 KAQQDTIAGLKSAEGYIRRELAHTVNLRNTPEIRFILDQSIEYGVRMSRLIDEV 118
[115][TOP]
>UniRef100_C1A8N9 Ribosome-binding factor A n=1 Tax=Gemmatimonas aurantiaca T-27
RepID=RBFA_GEMAT
Length = 146
Score = 79.0 bits (193), Expect = 2e-13
Identities = 49/131 (37%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGA-DRYLSSLTTITDVQVSADL 349
M RR VA+ I+ E++ L S GA D + + T+T V+V+ DL
Sbjct: 1 MGEVRRPDRVAEAIREEVATFL--------------SEGAKDPRIRAFVTVTAVEVTRDL 46
Query: 350 QVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRV 529
+ V+VS+ GD+ K+ AGL S A ++RS+LGK ++LR PE+ F DES R SR+
Sbjct: 47 RHATVFVSLMGDDADKKSTTAGLASVASHLRSQLGKSLRLRSAPEIHFRTDESVARASRI 106
Query: 530 IAILDKIKNEK 562
+L KI++E+
Sbjct: 107 EHLLAKIRDER 117
[116][TOP]
>UniRef100_C6D2F1 Ribosome-binding factor A n=1 Tax=Paenibacillus sp. JDR-2
RepID=C6D2F1_PAESJ
Length = 118
Score = 78.6 bits (192), Expect = 3e-13
Identities = 47/121 (38%), Positives = 70/121 (57%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
RV V +QI++ELS ++ T+ L + +G T+T V+ ++DL +VY
Sbjct: 5 RVGRVGEQIKKELSQIIQTE-------LKDPRIG-------FITVTGVEATSDLSQARVY 50
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV G E KE + L Y+RSELGKR++LR TPE+ F D S E GSR+ +L++
Sbjct: 51 LSVLGSEEQKEETLKALGKANGYLRSELGKRMRLRHTPELLFKFDSSIEYGSRIEGLLEE 110
Query: 548 I 550
I
Sbjct: 111 I 111
[117][TOP]
>UniRef100_C5VSK0 Ribosome-binding factor A n=1 Tax=Clostridium botulinum D str. 1873
RepID=C5VSK0_CLOBO
Length = 121
Score = 78.6 bits (192), Expect = 3e-13
Identities = 40/125 (32%), Positives = 72/125 (57%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R+ + +++++E+S+++ D D L+++ ++T V+V+ DL+ KV+
Sbjct: 5 RLGRINEEVRKEISNIIRDDI-------------HDPRLTAMVSVTRVEVTNDLRYAKVF 51
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+S+FG KE + LKS+A ++R E+G R+KLR TPE+ DES E G + +L
Sbjct: 52 ISIFGSNNSKEETLEALKSSAGFIRREVGHRVKLRYTPEIVLELDESIEHGMHINDLLSN 111
Query: 548 IKNEK 562
+K K
Sbjct: 112 LKGNK 116
[118][TOP]
>UniRef100_A6TRK6 Ribosome-binding factor A n=1 Tax=Alkaliphilus metalliredigens QYMF
RepID=RBFA_ALKMQ
Length = 138
Score = 78.6 bits (192), Expect = 3e-13
Identities = 41/121 (33%), Positives = 71/121 (58%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
RV +A++I++ +S M+ D D ++ +T+I +V V+ DL+ +Y
Sbjct: 8 RVNRLAEEIKKIISHMIRNDL-------------RDPRIAKMTSIIEVNVTRDLRFATIY 54
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GD++ KE I GLK ++ ++R E+G++I R TPE+ F DES ERG + ++ K
Sbjct: 55 ISVLGDQQEKEETIEGLKKSSGFIRKEVGRQITARFTPELIFKLDESIERGVYMYDVISK 114
Query: 548 I 550
+
Sbjct: 115 V 115
[119][TOP]
>UniRef100_A5ZAJ4 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum
ATCC 27560 RepID=A5ZAJ4_9FIRM
Length = 92
Score = 78.2 bits (191), Expect = 4e-13
Identities = 35/80 (43%), Positives = 57/80 (71%)
Frame = +2
Query: 311 LTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVR 490
+T++T V+V+ DL+ KVY+SV GDE K +AGLKS A ++R EL + + LR TPE++
Sbjct: 1 MTSVTGVEVTPDLKFCKVYISVLGDEEAKADTMAGLKSAAGFIRRELARTVNLRNTPELK 60
Query: 491 FMEDESFERGSRVIAILDKI 550
F+ D+S E G ++ ++D++
Sbjct: 61 FVMDQSIEYGMKMSKLIDEV 80
[120][TOP]
>UniRef100_UPI0001692ED7 ribosome-binding factor A n=1 Tax=Paenibacillus larvae subsp.
larvae BRL-230010 RepID=UPI0001692ED7
Length = 118
Score = 77.8 bits (190), Expect = 5e-13
Identities = 47/121 (38%), Positives = 70/121 (57%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
RV V +QI++ELS ++ ++ L + +G TIT V V+ DL + KVY
Sbjct: 5 RVGRVGEQIKKELSQIVQSE-------LKDPRIG-------FLTITGVDVTNDLSLAKVY 50
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV G + KE + L + Y+RSELGKRI+LR PE++F D S + GSR+ ++L
Sbjct: 51 LSVLGSDEEKEATLKALGVASGYIRSELGKRIRLRKVPELQFKFDTSIDYGSRIESLLQD 110
Query: 548 I 550
I
Sbjct: 111 I 111
[121][TOP]
>UniRef100_C7GDK6 Ribosome-binding factor A n=1 Tax=Roseburia intestinalis L1-82
RepID=C7GDK6_9FIRM
Length = 126
Score = 77.8 bits (190), Expect = 5e-13
Identities = 40/117 (34%), Positives = 70/117 (59%)
Frame = +2
Query: 209 QIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVYVSVFGDE 388
++QRELS+++ + D ++ LT++ V+V+ DL+ K Y+SV GDE
Sbjct: 14 EVQRELSNIIRGEI-------------KDPRINPLTSVVAVEVAPDLKTCKAYISVLGDE 60
Query: 389 RGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDKIKNE 559
+ +AGLKS ++RS+L K + LR TPE+RF+ D+S E G ++ ++D++ +
Sbjct: 61 ESQAKTLAGLKSAEGFIRSKLAKTVNLRNTPEIRFVLDQSIEYGVKMSKMIDEVTKD 117
[122][TOP]
>UniRef100_B5W1W9 Ribosome-binding factor A n=1 Tax=Arthrospira maxima CS-328
RepID=B5W1W9_SPIMA
Length = 105
Score = 77.8 bits (190), Expect = 5e-13
Identities = 35/82 (42%), Positives = 55/82 (67%)
Frame = +2
Query: 314 TTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRF 493
+ + ++ DLQ K++VS++G E + + GL+S Y+RS LGK I+LR TPEV F
Sbjct: 4 SVLPKLKCPGDLQHAKIFVSIYGTEEARRSTMEGLRSATGYIRSHLGKHIRLRRTPEVVF 63
Query: 494 MEDESFERGSRVIAILDKIKNE 559
+ED S ERG ++I +L++I +E
Sbjct: 64 LEDRSLERGDKIIELLNQISHE 85
[123][TOP]
>UniRef100_A6GK84 Ribosome-binding factor A n=1 Tax=Plesiocystis pacifica SIR-1
RepID=A6GK84_9DELT
Length = 153
Score = 77.4 bits (189), Expect = 7e-13
Identities = 44/124 (35%), Positives = 73/124 (58%)
Frame = +2
Query: 185 RRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKV 364
RR + V + ++RE++ MLL ++ + P +S ++T V VS DL V +
Sbjct: 3 RRRQRVEELLRREMAQMLLRGELRDPRLQP----------ASAVSVTGVSVSPDLSVATI 52
Query: 365 YVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
YV V + E +A L++ +R +LG+R++LR TPE+RF D+S ERG+RV AIL
Sbjct: 53 YVDVLTEALRLESVLAALRAGGGAIRRKLGERVQLRRTPELRFHHDDSIERGNRVEAILT 112
Query: 545 KIKN 556
++++
Sbjct: 113 ELRD 116
[124][TOP]
>UniRef100_A0Q0Q6 Ribosome-binding factor A n=1 Tax=Clostridium novyi NT
RepID=RBFA_CLONN
Length = 121
Score = 77.4 bits (189), Expect = 7e-13
Identities = 39/125 (31%), Positives = 72/125 (57%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R+ + +++++E+S+++ D D L+ + ++T V+V+ DL+ KV+
Sbjct: 5 RLGRINEEVKKEISNIIRDDI-------------HDPRLTGMVSVTRVEVTNDLRYAKVF 51
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+S+FG + K + LKS+A ++R E+G R+KLR TPE+ DES E G + +L
Sbjct: 52 ISIFGSDESKTETLEALKSSAGFIRREVGHRVKLRYTPEILLELDESIEHGMHINDLLSN 111
Query: 548 IKNEK 562
+K +K
Sbjct: 112 LKEKK 116
[125][TOP]
>UniRef100_Q18BH6 Ribosome-binding factor A n=1 Tax=Clostridium difficile 630
RepID=RBFA_CLOD6
Length = 126
Score = 77.4 bits (189), Expect = 7e-13
Identities = 45/130 (34%), Positives = 77/130 (59%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA+ R + +A++I++ +S ML+ D ++S+ ++TDV+V+ DL+
Sbjct: 1 MASYNRTRRIAEEIRKVVSTMLINGV-------------KDPRITSMVSVTDVEVTNDLR 47
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
VYVS+ G + +E + GLKS Y+R E+GK IKLR PE+ F D+S E+G +
Sbjct: 48 YAYVYVSILGGD--EESTLTGLKSAGGYIRREVGKNIKLRYIPEIVFKLDDSIEKGMYMD 105
Query: 533 AILDKIKNEK 562
+++ ++ NEK
Sbjct: 106 SLIKRV-NEK 114
[126][TOP]
>UniRef100_C1ZS88 Ribosome-binding factor A n=1 Tax=Rhodothermus marinus DSM 4252
RepID=C1ZS88_RHOMR
Length = 126
Score = 77.0 bits (188), Expect = 9e-13
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
M++ RV+ V ++REL+D +LQF + L +TT+TDVQ + DL
Sbjct: 1 MSSSIRVQRVGSLLKRELAD------ILQFEFGDQ--------LPPMTTVTDVQPTRDLS 46
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIK--LRLTPEVRFMEDESFERGSR 526
+ KVYVS++G K A L+ +R+ L +RI+ LR PE+RF+ DE+ ER R
Sbjct: 47 IAKVYVSIYGTPEQKRAAFRRLQELTPQIRAALAQRIRYQLRFMPELRFVLDETLERAQR 106
Query: 527 VIAILDKIKNEK 562
V +L +I+ E+
Sbjct: 107 VEELLARIREER 118
[127][TOP]
>UniRef100_B1BDR4 Ribosome-binding factor A n=1 Tax=Clostridium botulinum C str.
Eklund RepID=B1BDR4_CLOBO
Length = 121
Score = 77.0 bits (188), Expect = 9e-13
Identities = 39/125 (31%), Positives = 72/125 (57%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R+ + +++++E+S+++ D D L+ + ++T V+V+ DL+ KV+
Sbjct: 5 RLGRINEEVKKEISNIIRDDI-------------HDPRLTGMVSVTRVEVTNDLRYAKVF 51
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+S+FG + K + LKS+A ++R E+G R+KLR TPE+ DES E G + +L
Sbjct: 52 ISIFGSDESKAETLEALKSSAGFIRREVGHRVKLRYTPEIILELDESIEHGMHINDLLSN 111
Query: 548 IKNEK 562
+K +K
Sbjct: 112 LKEKK 116
[128][TOP]
>UniRef100_Q0TPR8 Ribosome-binding factor A n=8 Tax=Clostridium perfringens
RepID=RBFA_CLOP1
Length = 116
Score = 76.6 bits (187), Expect = 1e-12
Identities = 41/125 (32%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R K + +++++E+SD++ D L+++ ++T V+V+ DL+ KV+
Sbjct: 5 RGKRINEEVRKEVSDIIRNQI-------------KDPRLTAMVSVTQVEVTKDLRYAKVF 51
Query: 368 VSVFG-DERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
VS+F ++ KE ++ LKS+A ++R E+G R+KLR TPE+ F ED S + + ++L+
Sbjct: 52 VSLFAKNDEEKEESLKALKSSAGFIRREVGNRVKLRSTPEILFEEDNSIDNAMYIESLLN 111
Query: 545 KIKNE 559
KIK +
Sbjct: 112 KIKEK 116
[129][TOP]
>UniRef100_UPI00017F5CEA ribosome-binding factor A n=1 Tax=Clostridium difficile QCD-23m63
RepID=UPI00017F5CEA
Length = 126
Score = 76.3 bits (186), Expect = 2e-12
Identities = 44/130 (33%), Positives = 77/130 (59%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA+ R + ++++I++ +S ML+ D ++S+ ++TDV+V+ DL+
Sbjct: 1 MASYNRTRRISEEIRKVVSTMLINGV-------------KDPRITSMVSVTDVEVTNDLR 47
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
VYVS+ G + +E + GLKS Y+R E+GK IKLR PE+ F D+S E+G +
Sbjct: 48 YAYVYVSILGGD--EESTLTGLKSAGGYIRREVGKNIKLRYIPEIVFKIDDSIEKGMYMD 105
Query: 533 AILDKIKNEK 562
+++ ++ NEK
Sbjct: 106 SLIKRV-NEK 114
[130][TOP]
>UniRef100_C9XP41 Ribosome-binding factor A n=2 Tax=Clostridium difficile
RepID=C9XP41_CLODI
Length = 126
Score = 76.3 bits (186), Expect = 2e-12
Identities = 45/130 (34%), Positives = 76/130 (58%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA+ R + +A++I++ +S ML+ D ++S+ ++TDV+V+ DL+
Sbjct: 1 MASYNRTRRIAEEIRKVVSTMLINGV-------------KDPRITSMVSVTDVEVTNDLR 47
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
VYVS+ G + +E + GLKS Y+R E+GK IKLR PE+ F D+S E+G +
Sbjct: 48 YAYVYVSILGGD--EESTLTGLKSAGGYIRREVGKNIKLRYIPEIVFKLDDSIEKGMYMD 105
Query: 533 AILDKIKNEK 562
++ ++ NEK
Sbjct: 106 NLIKRV-NEK 114
[131][TOP]
>UniRef100_C9LB28 Ribosome-binding factor A n=1 Tax=Blautia hansenii DSM 20583
RepID=C9LB28_RUMHA
Length = 128
Score = 76.3 bits (186), Expect = 2e-12
Identities = 36/90 (40%), Positives = 57/90 (63%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D + +T++T V+V+ DL+ + Y+SV G+E K I GLKS Y+R +L K I LR
Sbjct: 29 DPRIHPMTSVTAVEVAPDLKTCRAYISVMGNEEAKNNTIVGLKSAEGYIRRQLAKNINLR 88
Query: 473 LTPEVRFMEDESFERGSRVIAILDKIKNEK 562
TPE+RF+ DES E G + ++D++ ++
Sbjct: 89 NTPEIRFILDESIEYGVAMSKLIDEVTGKE 118
[132][TOP]
>UniRef100_B6FZB8 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
13275 RepID=B6FZB8_9CLOT
Length = 127
Score = 76.3 bits (186), Expect = 2e-12
Identities = 42/127 (33%), Positives = 75/127 (59%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
M + R + ++++I++ + ML+ D ++S+ ++TDV V+ DL+
Sbjct: 1 MTSYNRTRRISEEIKKIIGQMLINGI-------------KDPRITSMISVTDVDVTNDLR 47
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
VYVS+ G +E ++AGLKS A Y+R E+GK++KLR PE+ F D+S ERG +
Sbjct: 48 YAFVYVSLLGGN--EEESLAGLKSAAGYIRREVGKKVKLRYIPEIMFKVDDSIERGMYMD 105
Query: 533 AILDKIK 553
+++ K++
Sbjct: 106 SLIKKVQ 112
[133][TOP]
>UniRef100_B1BWX4 Ribosome-binding factor A n=1 Tax=Clostridium perfringens E str.
JGS1987 RepID=B1BWX4_CLOPE
Length = 116
Score = 76.3 bits (186), Expect = 2e-12
Identities = 41/125 (32%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R K + +++++E+SD++ D L+++ ++T V+V+ DL+ KV+
Sbjct: 5 RGKRINEEVRKEVSDIIRNQI-------------KDPRLTAMVSVTQVEVTKDLRYAKVF 51
Query: 368 VSVFG-DERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
VS+F ++ KE ++ LKS+A ++R E+G R+KLR TPE+ F ED S + + ++L+
Sbjct: 52 VSLFAKNDEEKEESLKALKSSAGFIRREVGNRVKLRSTPEILFEEDTSIDNAMYIESLLN 111
Query: 545 KIKNE 559
KIK +
Sbjct: 112 KIKEK 116
[134][TOP]
>UniRef100_B0AAK7 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM
16795 RepID=B0AAK7_9CLOT
Length = 127
Score = 76.3 bits (186), Expect = 2e-12
Identities = 43/128 (33%), Positives = 74/128 (57%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA+ R + +A++I++ +S ML+ D ++SL ++TDV+V++DL
Sbjct: 1 MASNNRTRRIAEEIRKIVSTMLINGI-------------KDPRINSLVSVTDVEVTSDLS 47
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
+YVS+ G + +E + GLKS Y+R E+GK IK+R TPE+ F D+S +G +
Sbjct: 48 YAYIYVSILGGD--EESTLDGLKSACGYIRREVGKNIKIRHTPEIIFKIDDSLLKGMYMD 105
Query: 533 AILDKIKN 556
++ K+ N
Sbjct: 106 ELIKKVNN 113
[135][TOP]
>UniRef100_Q67P85 Ribosome-binding factor A n=1 Tax=Symbiobacterium thermophilum
RepID=RBFA_SYMTH
Length = 125
Score = 75.5 bits (184), Expect = 3e-12
Identities = 45/130 (34%), Positives = 73/130 (56%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
M+ R V +Q++ EL+ LL D+V + +I V+VS D++
Sbjct: 1 MSGNARAIRVGEQMREELAQ-LLRDEVKDPRI-------------GFVSIVKVEVSRDIR 46
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
K+YVSV G+++ K+ +AGL S ++RSEL KR++LR PE+ F DES E G R+
Sbjct: 47 HAKIYVSVLGNDQQKKETMAGLASATGFLRSELAKRLQLRYMPELHFALDESIEHGQRIA 106
Query: 533 AILDKIKNEK 562
+L +++ E+
Sbjct: 107 QLLVQVREEE 116
[136][TOP]
>UniRef100_A4J5X1 Ribosome-binding factor A n=1 Tax=Desulfotomaculum reducens MI-1
RepID=RBFA_DESRM
Length = 120
Score = 75.5 bits (184), Expect = 3e-12
Identities = 41/125 (32%), Positives = 75/125 (60%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + VA+ I++E++D++ D + + +G TIT V+V+ DL K++
Sbjct: 4 RPERVAEAIKKEVADLIRND-------IKDPRIG-------FVTITGVEVTRDLSFAKIF 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV G + ++ ++ L+ +A Y+RSE+G+RIKLR PE+ F D S + G+R+ IL +
Sbjct: 50 ISVMGSDAHRQETLSILQKSAGYMRSEIGRRIKLRHAPELIFKLDTSLDHGTRIAEILHE 109
Query: 548 IKNEK 562
I +++
Sbjct: 110 INSQE 114
[137][TOP]
>UniRef100_UPI0001850D89 ribosome-binding factor A n=1 Tax=Bacillus coahuilensis m4-4
RepID=UPI0001850D89
Length = 117
Score = 75.1 bits (183), Expect = 3e-12
Identities = 43/125 (34%), Positives = 72/125 (57%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + +Q+++EL D++ + + +G T+TDVQV+ DLQ KVY
Sbjct: 4 RSNRIGEQMKKELGDIISRK-------IKDPRIG-------FVTVTDVQVTGDLQQAKVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
++V D + +E + GL ++RSE+G RI+LR TPE+ F DES + G+R+ +I+
Sbjct: 50 ITVLDDSK-REDTLKGLSKAKGFIRSEIGSRIRLRKTPELLFEFDESIQYGNRIESIIRD 108
Query: 548 IKNEK 562
IK ++
Sbjct: 109 IKEDE 113
[138][TOP]
>UniRef100_UPI0001788773 ribosome-binding factor A n=1 Tax=Geobacillus sp. Y412MC10
RepID=UPI0001788773
Length = 117
Score = 75.1 bits (183), Expect = 3e-12
Identities = 45/121 (37%), Positives = 69/121 (57%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +QI++ELS ++ T+ L + +G T+T V V+ DL KVY
Sbjct: 5 RTGRVGEQIKKELSQLIQTE-------LKDPRIG-------FITVTGVDVTNDLSQAKVY 50
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+SV GD+ K ++ GL+ + ++RSELGKRI+LR PE+ F D+S GS + +L +
Sbjct: 51 LSVLGDDEQKAASLKGLEKASGFLRSELGKRIRLRHVPELIFKFDDSIAYGSHIEKLLTE 110
Query: 548 I 550
I
Sbjct: 111 I 111
[139][TOP]
>UniRef100_C8WWJ0 Ribosome-binding factor A n=2 Tax=Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446 RepID=C8WWJ0_ALIAC
Length = 118
Score = 75.1 bits (183), Expect = 3e-12
Identities = 44/125 (35%), Positives = 70/125 (56%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + VA+Q+++EL+D+L + L + +G TIT V+VS DLQ K+Y
Sbjct: 5 RAQKVAEQMKKELADILQHE-------LKDPRIG-------FVTITRVEVSGDLQHAKIY 50
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VSV+G E KE + L A ++R E+ +R+ +R+ PE+ F DES E R+ +L
Sbjct: 51 VSVYGPEAEKEATLGVLTKAAGFIRGEIARRLHMRMAPELVFRLDESGEYSERIEHVLKS 110
Query: 548 IKNEK 562
+K +
Sbjct: 111 LKENE 115
[140][TOP]
>UniRef100_C2C2D9 Ribosome-binding factor A n=1 Tax=Listeria grayi DSM 20601
RepID=C2C2D9_LISGR
Length = 114
Score = 75.1 bits (183), Expect = 3e-12
Identities = 42/118 (35%), Positives = 68/118 (57%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R +A+Q+++EL D+L L + LG TITDV+++ DLQ +Y
Sbjct: 4 RANRIAEQMKKELGDILNRK-------LKDPRLG-------FVTITDVEITGDLQQATIY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAIL 541
+SV G+E+ +E + L+ ++RSE+G RI+LR PE++F D S E G+R+ +L
Sbjct: 50 ISVLGEEKERENTLLALEKAHGFIRSEIGSRIRLRKVPELQFALDGSIEYGNRIDELL 107
[141][TOP]
>UniRef100_B7DS62 Ribosome-binding factor A n=1 Tax=Alicyclobacillus acidocaldarius
LAA1 RepID=B7DS62_9BACL
Length = 118
Score = 75.1 bits (183), Expect = 3e-12
Identities = 45/125 (36%), Positives = 70/125 (56%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + VA+Q+++EL+D+L + L + +G TIT V+VS DLQ KVY
Sbjct: 5 RAQKVAEQMKKELADILQHE-------LKDPRIG-------FVTITRVEVSGDLQHAKVY 50
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VSV+G E KE + L A ++R E+ +R+ +R+ PE+ F DES E R+ +L
Sbjct: 51 VSVYGPEVEKEATLGVLTKAAGFIRGEIARRLHMRIAPELVFRLDESGEYSERIEQVLKS 110
Query: 548 IKNEK 562
+K +
Sbjct: 111 LKENE 115
[142][TOP]
>UniRef100_B5CQM8 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC
29176 RepID=B5CQM8_9FIRM
Length = 127
Score = 75.1 bits (183), Expect = 3e-12
Identities = 41/120 (34%), Positives = 70/120 (58%)
Frame = +2
Query: 200 VAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVYVSVF 379
V ++QRELS++L A + D ++ +T++ V+V+ DL+ K Y+SV
Sbjct: 11 VNAEVQRELSNIL------------RAGI-KDPRVAPMTSVVAVEVAPDLKTCKAYISVL 57
Query: 380 GDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDKIKNE 559
GDE+ ++ I GL+S Y+R EL + I +R TPE+RF+ D+S E G + +D++ +
Sbjct: 58 GDEKAQQDTIRGLQSAEGYIRRELARTINMRNTPEIRFIVDQSIEYGVNISKKIDEVTRD 117
[143][TOP]
>UniRef100_C8W4P3 Ribosome-binding factor A n=1 Tax=Desulfotomaculum acetoxidans DSM
771 RepID=C8W4P3_9FIRM
Length = 119
Score = 74.7 bits (182), Expect = 4e-12
Identities = 38/122 (31%), Positives = 72/122 (59%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + +A+ I++E+SDM++ + L + +G T+IT V+VS DL K++
Sbjct: 4 RPERLAESIKKEVSDMIINE-------LKDPRIG-------FTSITSVEVSRDLSFAKIF 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VSV G E ++ + L ++R+E+G+RI+LR PE+ F+ D+S G++++ +L
Sbjct: 50 VSVLGTEEEQKATVEALSRANGFIRAEIGRRIRLRHVPELAFISDQSIAHGTKIMKLLQD 109
Query: 548 IK 553
++
Sbjct: 110 VQ 111
[144][TOP]
>UniRef100_A8RZ90 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
BAA-613 RepID=A8RZ90_9CLOT
Length = 133
Score = 74.7 bits (182), Expect = 4e-12
Identities = 35/89 (39%), Positives = 56/89 (62%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D + +T++ V+V+ DL+ K Y+SV GDE + I GLKS YVR EL +R+ LR
Sbjct: 29 DPRIHPMTSVVSVEVTPDLKFCKAYISVLGDEEAGKSTIQGLKSAEGYVRRELARRVNLR 88
Query: 473 LTPEVRFMEDESFERGSRVIAILDKIKNE 559
TPE++F+ D+S E G + ++D++ +
Sbjct: 89 NTPELKFILDQSIEYGVNMSRLIDEVTKD 117
[145][TOP]
>UniRef100_C4Z5N8 Ribosome-binding factor A n=1 Tax=Eubacterium eligens ATCC 27750
RepID=RBFA_EUBE2
Length = 130
Score = 74.7 bits (182), Expect = 4e-12
Identities = 33/86 (38%), Positives = 57/86 (66%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D ++ +T++ V+V+ DL+ K Y+SV GDE+ ++ I GLKS Y+R +L + + LR
Sbjct: 29 DPRINPMTSVVAVEVAPDLKTCKAYISVLGDEKSQKDTITGLKSAEGYIRRQLARTVNLR 88
Query: 473 LTPEVRFMEDESFERGSRVIAILDKI 550
TPE+RF+ D+S E G + ++D++
Sbjct: 89 NTPEIRFILDQSIEYGINMSKLIDEV 114
[146][TOP]
>UniRef100_B5YEH6 Ribosome-binding factor A n=1 Tax=Dictyoglomus thermophilum H-6-12
RepID=RBFA_DICT6
Length = 120
Score = 74.7 bits (182), Expect = 4e-12
Identities = 35/86 (40%), Positives = 57/86 (66%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D +SS IT+V++S DL+ +YVSV+G E K+ + GL+S ++RSELGK +++R
Sbjct: 26 DPRISSFLVITEVKMSKDLRYAHIYVSVYGSEEEKKQTMQGLESAKGFIRSELGKDLRIR 85
Query: 473 LTPEVRFMEDESFERGSRVIAILDKI 550
PE+ F D+S E+G R++ L ++
Sbjct: 86 FVPEIFFELDDSLEKGDRILRKLKEL 111
[147][TOP]
>UniRef100_C4FR84 Putative uncharacterized protein n=1 Tax=Veillonella dispar ATCC
17748 RepID=C4FR84_9FIRM
Length = 118
Score = 74.3 bits (181), Expect = 6e-12
Identities = 43/125 (34%), Positives = 73/125 (58%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
RV+ + + I++E+S ML+ L + +G TTITDV V+ DL+ +Y
Sbjct: 5 RVRKLQEFIKQEVSQMLMRG-------LKDPRIG-------FTTITDVHVTGDLREATIY 50
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VS+FG ++ KE + LK A ++R+ELGK +KLR P + F +D S + + ++L++
Sbjct: 51 VSLFGSDKEKEDTLIALKHAAGHIRTELGKVLKLRHIPSITFDKDTSLDYSMHIESLLNE 110
Query: 548 IKNEK 562
IK ++
Sbjct: 111 IKKDE 115
[148][TOP]
>UniRef100_B8E2Y9 Ribosome-binding factor A n=1 Tax=Dictyoglomus turgidum DSM 6724
RepID=B8E2Y9_DICTD
Length = 127
Score = 73.6 bits (179), Expect = 1e-11
Identities = 35/86 (40%), Positives = 56/86 (65%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D +SS IT V++S DL+ +YVSV+G E K+ + GL+S ++RSELGK +++R
Sbjct: 33 DPRISSFLVITGVKMSKDLRYAHIYVSVYGSEEEKKQTMKGLESAKGFIRSELGKDLRIR 92
Query: 473 LTPEVRFMEDESFERGSRVIAILDKI 550
PE+ F D+S E+G R++ L ++
Sbjct: 93 FVPEIFFELDDSLEKGDRILRKLKEL 118
[149][TOP]
>UniRef100_B0THR5 Ribosome-binding factor A n=1 Tax=Heliobacterium modesticaldum Ice1
RepID=RBFA_HELMI
Length = 121
Score = 73.6 bits (179), Expect = 1e-11
Identities = 46/128 (35%), Positives = 75/128 (58%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA R +M A++I+REL+ +L + + + LG +IT V+VS D +
Sbjct: 1 MAGHRMARM-AEEIKRELARLLRDE-------MKDPRLG-------FVSITAVEVSGDGR 45
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
KVYVSV GDE ++ + A LK ++R+EL K +++R PE+ F+ D S ERG+R+
Sbjct: 46 HAKVYVSVMGDESARDNSQAALKQATGFLRTELSKSLRVRYVPELVFLSDLSIERGTRIA 105
Query: 533 AILDKIKN 556
+L +++N
Sbjct: 106 RLLTEMEN 113
[150][TOP]
>UniRef100_B1YI61 Ribosome-binding factor A n=1 Tax=Exiguobacterium sibiricum 255-15
RepID=B1YI61_EXIS2
Length = 113
Score = 73.2 bits (178), Expect = 1e-11
Identities = 42/124 (33%), Positives = 67/124 (54%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R VA+Q+++E++ ML+ D + T+T V+V+ DLQ ++
Sbjct: 4 RSNRVAEQVRKEITQMLIKD--------------VNDPRVKAVTVTGVEVTGDLQQATIF 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
SV GDE +E A GL+ + ++R E+G RI+LR TPE+ F D S E GSR+ +L
Sbjct: 50 YSVLGDETVREEARVGLEKSKGFMRKEIGSRIRLRKTPELLFEIDTSVEYGSRIDELLRN 109
Query: 548 IKNE 559
+ +
Sbjct: 110 LNKD 113
[151][TOP]
>UniRef100_C9KKC5 Ribosome-binding factor A n=1 Tax=Mitsuokella multacida DSM 20544
RepID=C9KKC5_9FIRM
Length = 131
Score = 73.2 bits (178), Expect = 1e-11
Identities = 41/124 (33%), Positives = 75/124 (60%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
RV+ V + +++E+S+++L + L + +G T+T V+ + DL+ K+Y
Sbjct: 5 RVEKVQELMKQEISEIILRE-------LKDPRIG-------FVTVTSVECTGDLREAKIY 50
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VS+ G E+ + AGL+S+ ++R E+GKRI+LR TPE+ F+ D+S + + + +L K
Sbjct: 51 VSLMGSEQQVKDCWAGLQSSLGFIRREIGKRIRLRFTPELSFVVDKSLDYSAHIQELLLK 110
Query: 548 IKNE 559
I+ E
Sbjct: 111 IEAE 114
[152][TOP]
>UniRef100_C2AWS4 Ribosome-binding factor A n=1 Tax=Veillonella parvula DSM 2008
RepID=C2AWS4_9FIRM
Length = 118
Score = 73.2 bits (178), Expect = 1e-11
Identities = 42/125 (33%), Positives = 73/125 (58%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
RV+ + + I++E+S ML+ L + +G TTITDV V+ DL+ +Y
Sbjct: 5 RVRKLQEFIKQEVSQMLMRG-------LKDPRIG-------FTTITDVHVTGDLREATIY 50
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VS+FG ++ K+ + LK A ++R+ELGK +KLR P + F +D S + + ++L++
Sbjct: 51 VSLFGSDKEKQDTLIALKHAAGHIRTELGKVLKLRHIPSITFDKDTSLDYSMHIESLLNE 110
Query: 548 IKNEK 562
IK ++
Sbjct: 111 IKKDE 115
[153][TOP]
>UniRef100_B9E1K3 Ribosome-binding factor A n=2 Tax=Clostridium kluyveri
RepID=RBFA_CLOK1
Length = 121
Score = 73.2 bits (178), Expect = 1e-11
Identities = 40/122 (32%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Frame = +2
Query: 200 VAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVYVSVF 379
+ ++++RE+S+++ D D LS++ ++T V V+ D + KV+VS++
Sbjct: 9 INEEMKREISNIIRNDM-------------KDPRLSAMVSVTKVDVTKDQKYAKVFVSIY 55
Query: 380 GDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDKIK-N 556
G+++ K+ LKS+ ++R E+G R+KLR TPE+ D + E G + +L KIK N
Sbjct: 56 GEDKSKDDTFQVLKSSESFIRREVGHRVKLRNTPEIIIEMDNTIEYGMHINELLHKIKEN 115
Query: 557 EK 562
EK
Sbjct: 116 EK 117
[154][TOP]
>UniRef100_Q97I50 Ribosome-binding factor A n=1 Tax=Clostridium acetobutylicum
RepID=RBFA_CLOAB
Length = 121
Score = 73.2 bits (178), Expect = 1e-11
Identities = 38/87 (43%), Positives = 54/87 (62%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D L+S+ ++ V V+ DL+ K YVS+ GDE K+ + LK + ++R ELG +KLR
Sbjct: 27 DPRLTSMISVIKVDVTKDLRYAKAYVSILGDEAKKKETMDILKKSESFIRKELGYAVKLR 86
Query: 473 LTPEVRFMEDESFERGSRVIAILDKIK 553
TPEV D S E+G + AIL+KIK
Sbjct: 87 YTPEVIIELDTSIEKGMHIDAILEKIK 113
[155][TOP]
>UniRef100_C0FP05 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans
DSM 16841 RepID=C0FP05_9FIRM
Length = 124
Score = 72.8 bits (177), Expect = 2e-11
Identities = 34/89 (38%), Positives = 57/89 (64%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D ++ LT++ V+V+ DL+ K Y+SV GDE+ ++ I GLKS Y+R+ L K I LR
Sbjct: 29 DPRINPLTSVVAVEVAPDLKTCKAYISVLGDEKSQQDTIKGLKSAEGYIRTMLAKSINLR 88
Query: 473 LTPEVRFMEDESFERGSRVIAILDKIKNE 559
TP++ F+ D+S E G ++ ++D + +
Sbjct: 89 NTPQITFILDQSIEYGVKMSKMIDDVTKD 117
[156][TOP]
>UniRef100_B9Y7V8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM
12042 RepID=B9Y7V8_9FIRM
Length = 114
Score = 72.8 bits (177), Expect = 2e-11
Identities = 41/117 (35%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
Frame = +2
Query: 215 QRELSDMLLTD--KVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVYVSVFGDE 388
Q ++ ++L D ++QF+ L + S+G TITDVQV+ D +YVS G E
Sbjct: 5 QERVAQIILKDVTDIIQFS-LKDPSVG-------FVTITDVQVTNDYSYATIYVSFLGKE 56
Query: 389 RGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDKIKNE 559
K+ + L ++RSELGKR+ +R P++ F D+S E+G R+ +I+ +I +E
Sbjct: 57 ERKQAGLKALNRAKGFIRSELGKRLSIRKVPDLIFKLDDSLEKGERIDSIISQINHE 113
[157][TOP]
>UniRef100_Q2RJM4 Ribosome-binding factor A n=1 Tax=Moorella thermoacetica ATCC 39073
RepID=RBFA_MOOTA
Length = 122
Score = 72.8 bits (177), Expect = 2e-11
Identities = 40/127 (31%), Positives = 71/127 (55%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA R + VA+++++E++ ++ D+V R + L ++T V++S D
Sbjct: 1 MAVTARNQRVAEEMKKEIA-RIIRDEVKD-----------PRLEAGLVSVTGVELSNDRH 48
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
KVYVS++GDE + A+ GL ++R E+G+R+ LR TPE+ F D S E G +
Sbjct: 49 YAKVYVSIYGDEEARNQAMEGLARATSFIRREIGQRLSLRYTPEITFKLDVSIEHGDHIN 108
Query: 533 AILDKIK 553
+L +++
Sbjct: 109 RLLARVR 115
[158][TOP]
>UniRef100_B9MR49 Ribosome-binding factor A n=1 Tax=Anaerocellum thermophilum DSM
6725 RepID=RBFA_ANATD
Length = 132
Score = 72.8 bits (177), Expect = 2e-11
Identities = 44/126 (34%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V+++I++ELSD++ D L R + L +I V +S DL+ KVY
Sbjct: 5 RSDRVSEEIKKELSDIIQHD------------LKDPRLCAELISIVKVNMSKDLRHAKVY 52
Query: 368 VSVFGDERGK-EVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
VS+F ++ K E + L++ Y+R E+ +RI LR TPE+ F D+S E G+R+ IL+
Sbjct: 53 VSIFDKDKEKVETTMKALENAKPYIRREISRRISLRFTPEITFELDDSIEYGARISQILN 112
Query: 545 KIKNEK 562
++ K
Sbjct: 113 QLNIPK 118
[159][TOP]
>UniRef100_C5EQR3 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium
1_7_47FAA RepID=C5EQR3_9FIRM
Length = 133
Score = 72.4 bits (176), Expect = 2e-11
Identities = 34/89 (38%), Positives = 56/89 (62%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D + +T++ V+V+ DL+ + Y+SV G+E + I GLKS YVR EL +RI LR
Sbjct: 29 DPRIHPMTSVVSVEVTPDLKYCRAYISVLGNEDAAKATIEGLKSAEGYVRRELARRINLR 88
Query: 473 LTPEVRFMEDESFERGSRVIAILDKIKNE 559
TPE++F+ D+S E G + ++D++ +
Sbjct: 89 NTPELKFILDQSIEYGVNMSKLIDEVTKD 117
[160][TOP]
>UniRef100_A5KLM8 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC
27756 RepID=A5KLM8_9FIRM
Length = 127
Score = 72.4 bits (176), Expect = 2e-11
Identities = 39/120 (32%), Positives = 68/120 (56%)
Frame = +2
Query: 200 VAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVYVSVF 379
V ++QRELS++L D +S +T++ V+V+ DL+ K Y+SV
Sbjct: 11 VNAEVQRELSNILRGGI-------------KDPRVSPMTSVVAVEVAPDLKTCKAYISVL 57
Query: 380 GDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDKIKNE 559
GDE+ ++ I GL+S ++R EL + I +R TPE++F+ D+S E G + +D++ +
Sbjct: 58 GDEKAQQDTIKGLQSAEGFIRRELARTINMRNTPEIKFIVDQSIEYGVNISKKIDEVTKD 117
[161][TOP]
>UniRef100_A9KNW3 Ribosome-binding factor A n=1 Tax=Clostridium phytofermentans ISDg
RepID=RBFA_CLOPH
Length = 136
Score = 72.4 bits (176), Expect = 2e-11
Identities = 40/117 (34%), Positives = 73/117 (62%)
Frame = +2
Query: 200 VAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVYVSVF 379
+ +++Q+ELS ML++ ++ D ++ +T+I V+V+ DL+ KVY+SV
Sbjct: 11 INQEVQKELS-MLISREL------------KDPRINPMTSIVAVEVAPDLKTAKVYISVL 57
Query: 380 GDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDKI 550
GDE ++ +AGLKS A ++R +L + I LR TPE+ F+ D+S E G + +++++
Sbjct: 58 GDELSQKNTLAGLKSAAPFLRGQLARGINLRNTPELLFVVDQSIEYGVSMSKLINEV 114
[162][TOP]
>UniRef100_C0CJA3 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica
DSM 10507 RepID=C0CJA3_9FIRM
Length = 126
Score = 72.0 bits (175), Expect = 3e-11
Identities = 32/86 (37%), Positives = 55/86 (63%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D + +T++ V+V+ DL+ K Y+SV G++ +E + GLKS YVR +L + + LR
Sbjct: 29 DPRIHPMTSVMAVEVAPDLKTCKAYISVLGNQEAQEETMVGLKSAESYVRRQLARNLNLR 88
Query: 473 LTPEVRFMEDESFERGSRVIAILDKI 550
TPE+RF+ D+S E G + ++D++
Sbjct: 89 NTPEIRFLLDQSIEYGVHMSKLIDEV 114
[163][TOP]
>UniRef100_Q1GXD5 Ribosome-binding factor A n=1 Tax=Methylobacillus flagellatus KT
RepID=RBFA_METFK
Length = 125
Score = 72.0 bits (175), Expect = 3e-11
Identities = 44/120 (36%), Positives = 69/120 (57%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R VA+QIQREL+D+L QF V D +SS+ T+T+V+VS D+ KVY
Sbjct: 7 RSDRVAEQIQRELADLL------QFEV-------KDPRVSSMVTVTEVEVSGDMSHAKVY 53
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+ +G GL+ A ++RS+L +R+ LR P++ F+ D S +RG R+ ++D+
Sbjct: 54 YTA---PQGTPELQKGLEKTAGFLRSQLARRLLLRTVPQLHFVYDASIDRGMRIAKLIDE 110
[164][TOP]
>UniRef100_B8FR05 Ribosome-binding factor A n=2 Tax=Desulfitobacterium hafniense
RepID=RBFA_DESHD
Length = 125
Score = 72.0 bits (175), Expect = 3e-11
Identities = 36/82 (43%), Positives = 53/82 (64%)
Frame = +2
Query: 317 TITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFM 496
T+T V+V+ DL KVYVSV GD + + ++ LK A +VRSE+GKR++LR PE+ F
Sbjct: 34 TVTSVEVADDLGNAKVYVSVLGDSQQAKDSLDALKRAAGFVRSEIGKRVRLRHAPEIVFK 93
Query: 497 EDESFERGSRVIAILDKIKNEK 562
D S E G+ + +L +K E+
Sbjct: 94 YDTSIEHGAHIAQLLRGVKQEE 115
[165][TOP]
>UniRef100_C0WBC7 Ribosome-binding factor A n=1 Tax=Acidaminococcus sp. D21
RepID=C0WBC7_9FIRM
Length = 119
Score = 71.6 bits (174), Expect = 4e-11
Identities = 45/128 (35%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLT---DKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVV 358
R + + I++ELS+MLL D ++F TIT V+V+ +L
Sbjct: 5 RAEKLQALIKQELSNMLLREVKDPRVKFV-----------------TITGVEVTNELSYA 47
Query: 359 KVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAI 538
K+YVS++G E+ +E A GL+S Y R+E+ KRIKLR+ P + F +D S E + + +I
Sbjct: 48 KIYVSLYGSEKQQEEAWKGLQSCLGYFRTEIAKRIKLRMAPHLSFHKDTSMEYSAHIESI 107
Query: 539 LDKIKNEK 562
L +IK ++
Sbjct: 108 LKEIKEKE 115
[166][TOP]
>UniRef100_Q2C7T1 Ribosome-binding factor A n=1 Tax=Photobacterium sp. SKA34
RepID=Q2C7T1_9GAMM
Length = 131
Score = 71.2 bits (173), Expect = 5e-11
Identities = 43/121 (35%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + VA+Q+Q+EL+ ++L ++ A+ ++TTI+ V VS D+ K+Y
Sbjct: 7 RTQRVAQQLQKELA-VILQREIKDPAI-------------AMTTISSVDVSRDMNYAKIY 52
Query: 368 VSVFG-DERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
V+ F E+ E ++A L+ A Y+RS LGK I+LR+TPE+ F+ D+S G R+ ++
Sbjct: 53 VTFFPIGEQTAEGSLAALREMAPYIRSLLGKEIRLRVTPELNFIFDQSLTEGMRISNLVS 112
Query: 545 K 547
K
Sbjct: 113 K 113
[167][TOP]
>UniRef100_C9LLP1 Ribosome-binding factor A n=1 Tax=Dialister invisus DSM 15470
RepID=C9LLP1_9FIRM
Length = 119
Score = 71.2 bits (173), Expect = 5e-11
Identities = 41/124 (33%), Positives = 70/124 (56%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
RV+ + + I++E+ +MLL + L + LG T+T V+++ DL+ VY
Sbjct: 5 RVRKMQEFIKQEVGNMLLRE-------LKDPRLG-------FVTVTGVKLTGDLREATVY 50
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VS+FG E ++ ++ L + ++R ELG R+K+ TPE+ F ED+S + G + +L K
Sbjct: 51 VSLFGQEEERKESLMVLNKSKGFIRKELGTRLKVYYTPEISFEEDKSLDYGMHIEGLLKK 110
Query: 548 IKNE 559
I E
Sbjct: 111 IHEE 114
[168][TOP]
>UniRef100_C4GBF6 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles
DSM 14600 RepID=C4GBF6_9FIRM
Length = 125
Score = 71.2 bits (173), Expect = 5e-11
Identities = 40/120 (33%), Positives = 68/120 (56%)
Frame = +2
Query: 200 VAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVYVSVF 379
+ +++ RELS ++ D D +S +T++T V+V+ DL+ KVYVSV
Sbjct: 11 INEEVLRELSKIIREDV-------------KDPRVSLMTSVTLVEVAPDLKTAKVYVSVL 57
Query: 380 GDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDKIKNE 559
GD+ + GLKS+A ++R +L + LR TPE+ F+ D+S G R+ ++D++ E
Sbjct: 58 GDKEAGINTVKGLKSSAGFIRGKLAHSVNLRNTPELFFILDDSIAYGVRMSKLIDQVNEE 117
[169][TOP]
>UniRef100_C0EV69 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM
3353 RepID=C0EV69_9FIRM
Length = 128
Score = 71.2 bits (173), Expect = 5e-11
Identities = 34/86 (39%), Positives = 55/86 (63%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D ++ +T++ V+V+ DL+ K Y+SV GD+ +E + GL+S Y+R EL + I LR
Sbjct: 29 DPRIAPMTSVVSVEVAPDLKTCKAYISVLGDKEAQESTLEGLRSAHGYIRRELARSINLR 88
Query: 473 LTPEVRFMEDESFERGSRVIAILDKI 550
TP+VRF+ D+S E G + +D+I
Sbjct: 89 NTPDVRFILDQSIEYGVSMSKKIDEI 114
[170][TOP]
>UniRef100_Q3AB99 Ribosome-binding factor A n=1 Tax=Carboxydothermus hydrogenoformans
Z-2901 RepID=RBFA_CARHZ
Length = 125
Score = 71.2 bits (173), Expect = 5e-11
Identities = 31/81 (38%), Positives = 53/81 (65%)
Frame = +2
Query: 317 TITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFM 496
++T V ++ DL K+Y+SV+G E K+ + L S +++ EL R++LR+ PE+ F+
Sbjct: 37 SVTKVDLARDLSQAKIYISVYGSEEDKKNSFIALNSAKGFIKGELASRVRLRIMPELYFV 96
Query: 497 EDESFERGSRVIAILDKIKNE 559
ED S E G+R++ IL+ +K E
Sbjct: 97 EDPSIEYGARIMEILEGLKKE 117
[171][TOP]
>UniRef100_C6JGH6 Putative uncharacterized protein n=1 Tax=Ruminococcus sp.
5_1_39BFAA RepID=C6JGH6_9FIRM
Length = 131
Score = 70.9 bits (172), Expect = 6e-11
Identities = 32/86 (37%), Positives = 53/86 (61%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D + +T++ V+V+ DL+ + Y+SV G++ KE I GL S Y+R +L + + LR
Sbjct: 29 DPRIHPMTSVMAVEVAPDLKTCRAYISVLGEKEAKEATIKGLNSAEGYIRRQLARNLNLR 88
Query: 473 LTPEVRFMEDESFERGSRVIAILDKI 550
TPE+RF+ DES E G + ++D +
Sbjct: 89 NTPEIRFILDESIEYGVNMSKLIDDV 114
[172][TOP]
>UniRef100_C0D3R1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme
DSM 15981 RepID=C0D3R1_9CLOT
Length = 135
Score = 70.9 bits (172), Expect = 6e-11
Identities = 33/89 (37%), Positives = 56/89 (62%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D + +T++ V+V+ DL+ K Y+SV G+E + I GLKS YVR EL +R+ LR
Sbjct: 29 DPRIHPMTSVIAVEVTPDLKYCKAYISVLGNEDAGKATIEGLKSAEGYVRRELARRVNLR 88
Query: 473 LTPEVRFMEDESFERGSRVIAILDKIKNE 559
TP+++F+ D+S E G + ++D++ +
Sbjct: 89 NTPQIKFILDQSIEYGVNMSHLIDEVTKD 117
[173][TOP]
>UniRef100_B6FN21 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM
1787 RepID=B6FN21_9CLOT
Length = 123
Score = 70.9 bits (172), Expect = 6e-11
Identities = 31/89 (34%), Positives = 57/89 (64%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D ++ +T++ V+V+ DL+ K Y+SV GDE+ +E I GL+S Y+R EL +++ +R
Sbjct: 29 DPRVAPMTSVVAVEVAPDLKTCKAYISVLGDEKAQEDTIKGLQSAEGYIRRELARKLNMR 88
Query: 473 LTPEVRFMEDESFERGSRVIAILDKIKNE 559
TPE++F+ D+S G + ++D + +
Sbjct: 89 NTPEIKFVMDQSIAYGVAMSKMIDDVTRD 117
[174][TOP]
>UniRef100_A6D245 Ribosome-binding factor A n=1 Tax=Vibrio shilonii AK1
RepID=A6D245_9VIBR
Length = 138
Score = 70.9 bits (172), Expect = 6e-11
Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 1/125 (0%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + VA+Q+Q+EL+ +L + + ++ LG + TI+DV+VS DL KV+
Sbjct: 7 RTQRVAQQLQKELALILQRE-------VRDSRLG-------MVTISDVEVSRDLAYAKVF 52
Query: 368 VSVFG-DERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
V+ E+ E ++A L+ + ++R LGKRI+LRLTPEVRF D + G R+ ++
Sbjct: 53 VTFLCVGEQTPESSLAALREHEAHIRMMLGKRIRLRLTPEVRFHYDNTLVEGMRMSNLVS 112
Query: 545 KIKNE 559
++ NE
Sbjct: 113 EVVNE 117
[175][TOP]
>UniRef100_Q92C27 Ribosome-binding factor A n=1 Tax=Listeria innocua RepID=RBFA_LISIN
Length = 114
Score = 70.9 bits (172), Expect = 6e-11
Identities = 40/125 (32%), Positives = 69/125 (55%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V++Q+++EL D+L + + LG T+T V V+ DLQ KV+
Sbjct: 4 RANRVSEQMKKELGDILNRK-------IKDPRLG-------FVTVTGVDVTGDLQEAKVF 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+S+ G ++ KE + L+ ++RSE+G+RI+LR PE+ F D S G+R+ +L
Sbjct: 50 ISILGTDKEKENTLLALEKAHGFIRSEIGRRIRLRKVPEMSFEIDNSIAYGNRIDELLRD 109
Query: 548 IKNEK 562
+ N++
Sbjct: 110 LNNDQ 114
[176][TOP]
>UniRef100_UPI0001BB5063 ribosome-binding factor A n=1 Tax=Acinetobacter calcoaceticus
RUH2202 RepID=UPI0001BB5063
Length = 133
Score = 70.5 bits (171), Expect = 8e-11
Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 7/136 (5%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA +R+K +A +QRELS+++ + D L L TI+ V+VSAD+
Sbjct: 1 MAGSQRLKRMADSVQRELSELIRQEL-------------KDPRLGGLVTISAVKVSADMG 47
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSN-------AKYVRSELGKRIKLRLTPEVRFMEDESF 511
+VYV+V G E G E + A K + ++R EL +RIK R+TP +RF D++
Sbjct: 48 YAEVYVTVMGRELGDEQSEAANKETLDVLNKASGFLRHELSRRIKTRITPRLRFHYDKTN 107
Query: 512 ERGSRVIAILDKIKNE 559
G+ + +++K N+
Sbjct: 108 AYGNYMFGLIEKAVND 123
[177][TOP]
>UniRef100_C0GIW0 Ribosome-binding factor A n=1 Tax=Dethiobacter alkaliphilus AHT 1
RepID=C0GIW0_9FIRM
Length = 122
Score = 70.5 bits (171), Expect = 8e-11
Identities = 39/119 (32%), Positives = 68/119 (57%)
Frame = +2
Query: 185 RRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKV 364
+R V ++I+RE+S +L T+ D ++ L ++TDV V+ DL+ K+
Sbjct: 4 QRAHRVGEEIKREVSSILRTEI-------------KDPRVTGLISVTDVAVTRDLRHAKL 50
Query: 365 YVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAIL 541
++S+ G E ++ ++ L ++RSE+GKRI+LR TPE+ F D+S G+ + IL
Sbjct: 51 FISMLGSEEEQQETLSALSRAVGFIRSEIGKRIRLRHTPEISFHLDKSIAYGAHINKIL 109
[178][TOP]
>UniRef100_A7B8A6 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC
29149 RepID=A7B8A6_RUMGN
Length = 123
Score = 70.5 bits (171), Expect = 8e-11
Identities = 38/104 (36%), Positives = 61/104 (58%)
Frame = +2
Query: 209 QIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVYVSVFGDE 388
++QRELS++L D ++ +T++ V+V+ DL+ K Y+SV GD+
Sbjct: 14 EVQRELSNILRGGI-------------KDPRVAPMTSVVAVEVAPDLKTCKAYISVLGDK 60
Query: 389 RGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERG 520
+ +E I GL+S Y+R EL + I +R TPE+RF+ D+S E G
Sbjct: 61 KAQEDTITGLQSAEGYIRRELARTINMRNTPEIRFIMDQSIEYG 104
[179][TOP]
>UniRef100_D0C035 Ribosome-binding factor A n=1 Tax=Acinetobacter sp. RUH2624
RepID=D0C035_9GAMM
Length = 133
Score = 70.1 bits (170), Expect = 1e-10
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 7/132 (5%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA +R+K +A +QRELSD++ + D L L TI+ V+VSAD+
Sbjct: 1 MAGSQRLKRMADSVQRELSDLIRQEL-------------KDPRLGGLVTISAVKVSADMG 47
Query: 353 VVKVYVSVFGDERGKEVAIAG-------LKSNAKYVRSELGKRIKLRLTPEVRFMEDESF 511
+VYV+V G E G E + A L + ++R EL +RIK R+TP +RF D++
Sbjct: 48 YAEVYVTVMGRELGDEQSEAANKETLDVLNKASGFLRHELSRRIKTRITPRLRFHYDKTN 107
Query: 512 ERGSRVIAILDK 547
G+ + +++K
Sbjct: 108 AYGNYMFGLIEK 119
[180][TOP]
>UniRef100_C7RGP1 Ribosome-binding factor A n=1 Tax=Anaerococcus prevotii DSM 20548
RepID=C7RGP1_ANAPD
Length = 128
Score = 70.1 bits (170), Expect = 1e-10
Identities = 43/124 (34%), Positives = 67/124 (54%)
Frame = +2
Query: 179 NPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVV 358
N RR + ++ ++++ELS +L D L + L + ++ TITDV+V+ DL
Sbjct: 2 NKRRTERISSEVKKELSKILRDD-------LNDPRLSTE----AMVTITDVEVTNDLSYA 50
Query: 359 KVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAI 538
YVSV GD KE + L+ Y++ +G+R++LR PE RF D S E G A
Sbjct: 51 DCYVSVLGDATNKEDVLEALEQAKGYIKILIGERMRLRSMPEFRFKIDNSIEHG----AY 106
Query: 539 LDKI 550
+DK+
Sbjct: 107 MDKL 110
[181][TOP]
>UniRef100_B0MD23 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM
14662 RepID=B0MD23_9FIRM
Length = 116
Score = 70.1 bits (170), Expect = 1e-10
Identities = 33/86 (38%), Positives = 54/86 (62%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D ++ +T++ D V++DL+ K Y+SV GD++ KE + GL+S Y+R EL I LR
Sbjct: 29 DPRIAPMTSVVDAVVTSDLKQCKAYISVLGDQKAKEDTLNGLRSAVGYIRRELAHSINLR 88
Query: 473 LTPEVRFMEDESFERGSRVIAILDKI 550
TPE+ F+ D+S E G + +D++
Sbjct: 89 NTPEITFILDDSIEYGVEMSKKIDEL 114
[182][TOP]
>UniRef100_A3ICE4 Ribosome-binding factor A n=1 Tax=Bacillus sp. B14905
RepID=A3ICE4_9BACI
Length = 113
Score = 70.1 bits (170), Expect = 1e-10
Identities = 42/124 (33%), Positives = 68/124 (54%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R VA+Q+++EL D+L + + +G T+T V+V+ DLQ +Y
Sbjct: 4 RSNRVAEQMKKELGDILGRK-------IKDPRVG-------FVTVTGVEVTGDLQQATIY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
++ G+ER +E I L + ++RSE+G RI+LR TPE+ F D S E G+R+ +L
Sbjct: 50 ITSLGNEREREETIKALVKASGFIRSEIGSRIRLRRTPELIFEFDSSIEYGNRIDTLLRG 109
Query: 548 IKNE 559
+ E
Sbjct: 110 LHKE 113
[183][TOP]
>UniRef100_Q014V1 Ribosome-binding factor A protein-like (ISS) n=1 Tax=Ostreococcus
tauri RepID=Q014V1_OSTTA
Length = 159
Score = 70.1 bits (170), Expect = 1e-10
Identities = 34/63 (53%), Positives = 45/63 (71%)
Frame = +2
Query: 371 SVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDKI 550
S FG GK+ AI GLK YVR ++G R+ LRLTPE+R + D+SFERG +V A+LD+I
Sbjct: 12 SWFGSSIGKQNAIKGLKRMETYVRRKIGSRMSLRLTPEIRLIYDDSFERGQKVSALLDEI 71
Query: 551 KNE 559
+ E
Sbjct: 72 RQE 74
[184][TOP]
>UniRef100_C1L2N3 Ribosome-binding factor A n=9 Tax=Listeria monocytogenes
RepID=RBFA_LISMC
Length = 114
Score = 70.1 bits (170), Expect = 1e-10
Identities = 40/125 (32%), Positives = 68/125 (54%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V++Q+++EL D+L + + LG T+T V V+ DLQ KV+
Sbjct: 4 RANRVSEQMKKELGDILNRK-------IKDPRLG-------FVTVTGVDVTGDLQEAKVF 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+S+ G ++ KE + L ++RSE+G+RI+LR PE+ F D S G+R+ +L
Sbjct: 50 ISILGTDKEKENTLLALAKAHGFIRSEIGRRIRLRKVPEMSFEIDNSIAYGNRIDELLRD 109
Query: 548 IKNEK 562
+ N++
Sbjct: 110 LNNDQ 114
[185][TOP]
>UniRef100_B3EAE8 Ribosome-binding factor A n=1 Tax=Geobacter lovleyi SZ
RepID=RBFA_GEOLS
Length = 123
Score = 70.1 bits (170), Expect = 1e-10
Identities = 33/78 (42%), Positives = 53/78 (67%)
Frame = +2
Query: 317 TITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFM 496
TIT V+V+ DL + +++ +V GDE K+ + AGL S A+++R ELGK +K+R TP++ F
Sbjct: 34 TITGVEVTDDLHLARIFFTVIGDEAAKKSSEAGLNSAARFIRHELGKVLKMRYTPDILFK 93
Query: 497 EDESFERGSRVIAILDKI 550
D S E G R+ +L ++
Sbjct: 94 YDHSQEYGQRIDDLLREV 111
[186][TOP]
>UniRef100_C0QHM3 Ribosome-binding factor A n=1 Tax=Desulfobacterium autotrophicum
HRM2 RepID=RBFA_DESAH
Length = 119
Score = 70.1 bits (170), Expect = 1e-10
Identities = 42/121 (34%), Positives = 69/121 (57%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + VA +IQ LSD L+ KV + L TI+ V++++DL++ VY
Sbjct: 6 RSERVAARIQEILSD-LIKKKVQDPRI-------------ELVTISSVRLTSDLRIAYVY 51
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
SVFGDE E A GLKS+ +++ + ++ LR PE++F+ D+SF+RG+ + +L
Sbjct: 52 FSVFGDEARVEEATQGLKSSHGFIKRHVASQLGLRYMPELKFIHDQSFDRGTHMDQLLKS 111
Query: 548 I 550
+
Sbjct: 112 V 112
[187][TOP]
>UniRef100_B1HR07 Ribosome-binding factor A n=1 Tax=Lysinibacillus sphaericus C3-41
RepID=B1HR07_LYSSC
Length = 113
Score = 69.7 bits (169), Expect = 1e-10
Identities = 41/124 (33%), Positives = 68/124 (54%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R VA+Q+++EL D+L + + +G T+T V+V+ DLQ +Y
Sbjct: 4 RSNRVAEQMKKELGDILGRK-------IKDPRVG-------FVTVTGVEVTGDLQQATIY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
++ G+ER +E + L + ++RSE+G RI+LR TPE+ F D S E G+R+ +L
Sbjct: 50 ITSLGNEREREETLKALVKASGFIRSEIGSRIRLRRTPELIFEFDSSIEYGNRIDTLLRD 109
Query: 548 IKNE 559
+ E
Sbjct: 110 LHKE 113
[188][TOP]
>UniRef100_C6LMF1 Ribosome-binding factor A n=1 Tax=Bryantella formatexigens DSM
14469 RepID=C6LMF1_9FIRM
Length = 130
Score = 69.7 bits (169), Expect = 1e-10
Identities = 36/116 (31%), Positives = 67/116 (57%)
Frame = +2
Query: 200 VAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVYVSVF 379
V ++QREL+ ++ ++ D + LT++ V+V+ DL+ K Y+SV
Sbjct: 11 VNSEVQRELAGIIRSEI-------------KDPRIHPLTSVVLVEVAPDLKTCKAYISVL 57
Query: 380 GDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
GDE+ ++ + GL+S ++R +L + LR TPE+RF+ D+S E G R+ ++++
Sbjct: 58 GDEQAQQSTLEGLRSAVGFIRRQLAHNLNLRNTPEIRFILDQSIEYGVRMSKLIEE 113
[189][TOP]
>UniRef100_C4V3N3 Ribosome-binding factor A n=1 Tax=Selenomonas flueggei ATCC 43531
RepID=C4V3N3_9FIRM
Length = 118
Score = 69.7 bits (169), Expect = 1e-10
Identities = 39/124 (31%), Positives = 68/124 (54%)
Frame = +2
Query: 191 VKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVYV 370
++ V + +++E+SD++ + L + +G T+T V + DL+ K+YV
Sbjct: 1 MEKVQELMKQEISDIIFNE-------LKDPRIG-------FVTVTSVACTEDLREAKIYV 46
Query: 371 SVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDKI 550
SV GDE+ + GL S+ +VR E+GKRI+LR TPE+ F D S + +L++I
Sbjct: 47 SVMGDEKKARDTLNGLNSSLGFVRREIGKRIRLRFTPEISFALDTSLNYSDHIQRLLNEI 106
Query: 551 KNEK 562
++
Sbjct: 107 HEDQ 110
[190][TOP]
>UniRef100_C0FC35 Putative uncharacterized protein n=1 Tax=Clostridium sp. M62/1
RepID=C0FC35_9CLOT
Length = 143
Score = 69.7 bits (169), Expect = 1e-10
Identities = 38/120 (31%), Positives = 65/120 (54%)
Frame = +2
Query: 200 VAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVYVSVF 379
+ ++QRELS+++ + D + +TT+ V+V+ DL+ K Y+SV
Sbjct: 24 INSEVQRELSEIISREI-------------KDPRIHPMTTVVAVEVTPDLKYCKAYISVL 70
Query: 380 GDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDKIKNE 559
G E + I GLKS +VR +L RI LR TPE+ F+ D+S E G + +++++ +
Sbjct: 71 GSEEAGKETIKGLKSAEGFVRRQLASRINLRNTPEITFVLDQSIEYGVNMTHLINEVTKD 130
[191][TOP]
>UniRef100_A1HSB5 Ribosome-binding factor A n=1 Tax=Thermosinus carboxydivorans Nor1
RepID=A1HSB5_9FIRM
Length = 117
Score = 69.7 bits (169), Expect = 1e-10
Identities = 40/125 (32%), Positives = 72/125 (57%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
RV+ + + I++E+S ++LT+ L + +G T+T V+VS DL+ K++
Sbjct: 5 RVEKIQEFIKQEVSKIILTE-------LKDPRIG-------FVTVTRVEVSGDLRYAKIF 50
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+S+ G + K AGL Y+R+E+GK + +R PE+ DES + +R+ +L+K
Sbjct: 51 LSLMGSDEEKAGTWAGLHRALGYIRTEIGKHLGIRHVPELSLHLDESLQYSARIQELLNK 110
Query: 548 IKNEK 562
IK+E+
Sbjct: 111 IKHEE 115
[192][TOP]
>UniRef100_Q1ZJV9 Ribosome-binding factor A n=1 Tax=Photobacterium angustum S14
RepID=Q1ZJV9_PHOAS
Length = 132
Score = 69.3 bits (168), Expect = 2e-10
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + VA+Q+Q+EL+ +L + L E L ++TTI+ V VS D+ KVY
Sbjct: 7 RTQRVAQQLQKELALILQRE-------LKEPRL-------AMTTISSVDVSRDMGYAKVY 52
Query: 368 VS--VFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAIL 541
++ GD+ +E ++A L+ A Y+RS LGK+I+LR+TPE+ F+ D+S G R+ ++
Sbjct: 53 ITFLTIGDQTEEE-SLAILREKAPYIRSLLGKQIRLRVTPELNFIFDQSLTEGMRISNLV 111
Query: 542 DK 547
K
Sbjct: 112 SK 113
[193][TOP]
>UniRef100_A7MZI4 Ribosome-binding factor A n=2 Tax=Vibrio harveyi RepID=RBFA_VIBHB
Length = 135
Score = 69.3 bits (168), Expect = 2e-10
Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + V++Q+Q+EL+ +L + + ++ LG + TI+DV+VS DL KV+
Sbjct: 7 RTQRVSQQLQKELAMILQRE-------VRDSRLG-------MVTISDVEVSRDLAYAKVF 52
Query: 368 VSVFG-DERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
V+ E+ E +A L+ + ++R LGKRI+LRLTPE+RF D + G R+ ++
Sbjct: 53 VTFLCVGEQTPESCLAALREHEVHIRMMLGKRIRLRLTPEIRFYYDNTLVEGMRMSNLVS 112
Query: 545 KIKNE 559
++ NE
Sbjct: 113 EVVNE 117
[194][TOP]
>UniRef100_B2A398 Ribosome-binding factor A n=1 Tax=Natranaerobius thermophilus
JW/NM-WN-LF RepID=RBFA_NATTJ
Length = 131
Score = 69.3 bits (168), Expect = 2e-10
Identities = 31/78 (39%), Positives = 52/78 (66%)
Frame = +2
Query: 317 TITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFM 496
T+T V +S DL+ KV+VS+ G++ ++ ++ GL+ ++RSELGKR++LR PE+ F
Sbjct: 34 TVTSVDLSGDLRHAKVFVSILGEKENQQDSLRGLEKATGFIRSELGKRVRLRHVPEIVFK 93
Query: 497 EDESFERGSRVIAILDKI 550
DES E G + +L ++
Sbjct: 94 FDESIEHGDHINKLLKQM 111
[195][TOP]
>UniRef100_B9EBF7 Ribosome-binding factor A n=1 Tax=Macrococcus caseolyticus JCSC5402
RepID=RBFA_MACCJ
Length = 114
Score = 69.3 bits (168), Expect = 2e-10
Identities = 33/125 (26%), Positives = 76/125 (60%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + V +Q+++E+S+++ L ++G T+T+V+V+ DL + VY
Sbjct: 4 RSERVGEQLKKEISEIINQK-------LKNPNVG-------FVTVTEVEVTGDLSLASVY 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
V+V G+E+ ++ ++ GL+ + +++SE+ R+ LR+ P+++F DES + G+++ ++ +
Sbjct: 50 VTVLGEEKERKKSLEGLEKSKGFIKSEIAHRMDLRIVPDLKFKYDESIDYGNKIERMIAE 109
Query: 548 IKNEK 562
+ +K
Sbjct: 110 LNRDK 114
[196][TOP]
>UniRef100_C2CEX6 Ribosome-binding factor A n=1 Tax=Anaerococcus tetradius ATCC 35098
RepID=C2CEX6_9FIRM
Length = 125
Score = 68.9 bits (167), Expect = 2e-10
Identities = 42/124 (33%), Positives = 68/124 (54%)
Frame = +2
Query: 179 NPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVV 358
N RR + ++ ++++ELS +L D L + L + ++ +ITDV+V+ DL
Sbjct: 2 NKRRTERISSEVKKELSKILRDD-------LSDPRLSNE----AMVSITDVEVTNDLSFA 50
Query: 359 KVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAI 538
Y+SV GDE+ KE + L Y++ +G+R++LR PE RF D S E G A
Sbjct: 51 DCYISVLGDEQKKEDVLDALDQAKGYIKILIGERMRLRSMPEFRFKLDNSIEHG----AY 106
Query: 539 LDKI 550
+DK+
Sbjct: 107 MDKL 110
[197][TOP]
>UniRef100_C2BHN3 Ribosome-binding factor A n=1 Tax=Anaerococcus lactolyticus ATCC
51172 RepID=C2BHN3_9FIRM
Length = 127
Score = 68.9 bits (167), Expect = 2e-10
Identities = 38/124 (30%), Positives = 69/124 (55%)
Frame = +2
Query: 179 NPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVV 358
N +R ++ +++RE+S +++ D L + L A+ ++ ++TDV+V+ DL
Sbjct: 2 NKKRTARISSEVKREISKIIMDD-------LNDPRLSAE----AMVSVTDVEVTNDLSYA 50
Query: 359 KVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAI 538
+Y+SV GD + K+ + L Y++ +G+R++LR PE RF D S E G A
Sbjct: 51 DIYISVLGDNKTKDGVMEALNQAKGYIKILIGERMRLRSMPEFRFKFDNSIEHG----AY 106
Query: 539 LDKI 550
+DK+
Sbjct: 107 MDKL 110
[198][TOP]
>UniRef100_C1I7I2 Ribosome-binding factor A n=1 Tax=Clostridium sp. 7_2_43FAA
RepID=C1I7I2_9CLOT
Length = 116
Score = 68.9 bits (167), Expect = 2e-10
Identities = 42/130 (32%), Positives = 78/130 (60%), Gaps = 1/130 (0%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MAN R + + ++++RE+S +++ D++ D ++++ +IT V+V+ DL+
Sbjct: 1 MANYRGGR-INEEVRREIS-VIIRDEI------------KDPRMTAMVSITAVKVTKDLR 46
Query: 353 VVKVYVSVFG-DERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRV 529
KV+VS+FG +E K A LKS + Y+R E+G+RI LR TP++ F D+S ++
Sbjct: 47 YAKVFVSIFGKNEDEKNETFAALKSASGYIRKEIGQRINLRNTPQILFELDDSISYSMKI 106
Query: 530 IAILDKIKNE 559
+++K K +
Sbjct: 107 EELIEKAKEK 116
[199][TOP]
>UniRef100_B5FA80 Ribosome-binding factor A n=1 Tax=Vibrio fischeri MJ11
RepID=RBFA_VIBFM
Length = 135
Score = 68.9 bits (167), Expect = 2e-10
Identities = 45/125 (36%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + V++Q+Q+EL+ ML + + ++ +G + TI+DV+VS DL KV+
Sbjct: 7 RTQRVSQQLQKELAVMLQRE-------VRDSRIG-------MVTISDVEVSRDLAYAKVF 52
Query: 368 VSVF--GDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAIL 541
V+ F GD+ E ++A LK + +R LGKRI+LRLTPE+RF D + G R+ ++
Sbjct: 53 VTFFCVGDQT-PESSLAALKEHEPSLRMMLGKRIRLRLTPEIRFTYDNTLVEGMRMSNLV 111
Query: 542 DKIKN 556
+ N
Sbjct: 112 TDVVN 116
[200][TOP]
>UniRef100_Q5E7L4 Ribosome-binding factor A n=1 Tax=Vibrio fischeri ES114
RepID=RBFA_VIBF1
Length = 135
Score = 68.9 bits (167), Expect = 2e-10
Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + V++Q+Q+EL+ ML + + ++ +G + TI+DV+VS DL KV+
Sbjct: 7 RTQRVSQQLQKELAVMLQRE-------VRDSRIG-------MVTISDVEVSRDLAYAKVF 52
Query: 368 VSVFG-DERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
V+ F E+ E ++A LK + +R LGKRI+LRLTPE+RF D + G R+ ++
Sbjct: 53 VTFFCVGEQTPESSLAALKEHEPSLRMMLGKRIRLRLTPEIRFTYDNTLVEGMRMSNLVT 112
Query: 545 KIKN 556
+ N
Sbjct: 113 DVVN 116
[201][TOP]
>UniRef100_B3EFB2 Ribosome-binding factor A n=1 Tax=Chlorobium limicola DSM 245
RepID=RBFA_CHLL2
Length = 119
Score = 68.9 bits (167), Expect = 2e-10
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + VA +Q+EL +L + LP +S +L+T+ DV+V+ADL + ++Y
Sbjct: 4 RTEKVASLLQQELGAILEKE-------LPRSS--------ALSTVVDVKVTADLGIARIY 48
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIK--LRLTPEVRFMEDESFERGSRVIAIL 541
VSV G E + +A L KY+R L +I+ R PE+ F ED +ER SR+ +L
Sbjct: 49 VSVIGTEEQRTAIMAWLHDETKYLRKLLSAKIRHHFRRIPEIEFFEDRIYERASRIEQLL 108
Query: 542 DKIK 553
+++
Sbjct: 109 REVR 112
[202][TOP]
>UniRef100_Q2IPZ5 Ribosome-binding factor A n=1 Tax=Anaeromyxobacter dehalogenans
2CP-C RepID=RBFA_ANADE
Length = 138
Score = 68.9 bits (167), Expect = 2e-10
Identities = 40/129 (31%), Positives = 69/129 (53%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
M R VA++ + ELS +L D ++ T+T ++S DL+
Sbjct: 1 MTTHNRPARVAEEFRHELSALLARGL-------------KDPRITGFVTVTGSKMSPDLK 47
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
VYVS+ GDER ++ AGL++ A +++ E+ + ++LR TP +RF+ DES RG R+
Sbjct: 48 EATVYVSIHGDERVRKDTFAGLQAAAGFLQREVSRALRLRNTPHLRFVYDESVARGDRIE 107
Query: 533 AILDKIKNE 559
+L + + +
Sbjct: 108 RLLREARTQ 116
[203][TOP]
>UniRef100_C9LTT1 Ribosome-binding factor A n=1 Tax=Selenomonas sputigena ATCC 35185
RepID=C9LTT1_9FIRM
Length = 119
Score = 68.6 bits (166), Expect = 3e-10
Identities = 36/118 (30%), Positives = 68/118 (57%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R++ V + +++E+S ++L + L + +G T+T V+++ DL+ K++
Sbjct: 5 RIEKVQELMKQEISQIILQE-------LKDPRIG-------FVTVTKVEMTGDLREAKIF 50
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAIL 541
VS+ G + + + GLKS+ ++R E+GKRI+LR TPE+ F D+S S + +L
Sbjct: 51 VSIMGKDEALKDTLQGLKSSLGFIRREIGKRIRLRFTPEISFALDDSLAYSSHIQELL 108
[204][TOP]
>UniRef100_B8K9B8 Ribosome-binding factor A n=1 Tax=Vibrio parahaemolyticus 16
RepID=B8K9B8_VIBPA
Length = 135
Score = 68.6 bits (166), Expect = 3e-10
Identities = 44/125 (35%), Positives = 72/125 (57%), Gaps = 1/125 (0%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + VA+Q+Q+EL+ +L + + ++ LG + TI+DV+VS DL KV+
Sbjct: 7 RTQRVAQQLQKELAMILQRE-------VRDSRLG-------MVTISDVEVSRDLAYAKVF 52
Query: 368 VSVFG-DERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
V+ E+ E + L+ + ++R LGKRI+LRLTPEVRF D + G R+ ++
Sbjct: 53 VTFLCVGEQTPESCLEALREHEVHIRMMLGKRIRLRLTPEVRFHYDNTLVEGMRMSNLVS 112
Query: 545 KIKNE 559
++ NE
Sbjct: 113 EVVNE 117
[205][TOP]
>UniRef100_A6NTY2 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus
ATCC 29799 RepID=A6NTY2_9BACE
Length = 129
Score = 68.6 bits (166), Expect = 3e-10
Identities = 42/118 (35%), Positives = 66/118 (55%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R+ + ++IQRELS ++ T K D + L +IT V + DL+ K++
Sbjct: 5 RIGRINEEIQRELSGLIRTVK--------------DPRVHGLVSITAVDTTTDLRYAKIH 50
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAIL 541
VSV EV + GLKS A Y+R ELG + LR TPE+ F +D+S +G+ ++++L
Sbjct: 51 VSVLDKSDVNEV-VKGLKSAAGYLRRELGAALSLRYTPELIFEKDDSMAQGAHILSML 107
[206][TOP]
>UniRef100_A5ZWK5 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC
29174 RepID=A5ZWK5_9FIRM
Length = 127
Score = 68.6 bits (166), Expect = 3e-10
Identities = 31/86 (36%), Positives = 52/86 (60%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D + +T++ V+V+ DL+ K ++SV G++ K+ I GL Y+R +L K + LR
Sbjct: 29 DPRIHPMTSVMAVEVAPDLKTCKAFISVLGNKEAKDATIQGLNKAEGYIRRQLAKNLNLR 88
Query: 473 LTPEVRFMEDESFERGSRVIAILDKI 550
TPE+RF+ DES E G + ++D +
Sbjct: 89 NTPEIRFILDESIEYGVNMSKLIDDV 114
[207][TOP]
>UniRef100_B9DPD6 Ribosome-binding factor A n=1 Tax=Staphylococcus carnosus subsp.
carnosus TM300 RepID=RBFA_STACT
Length = 115
Score = 68.6 bits (166), Expect = 3e-10
Identities = 38/114 (33%), Positives = 66/114 (57%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + V +Q+++EL D ++ +KV + TITDVQV+ DL + KVY
Sbjct: 5 RAERVGEQMKKELMD-IINNKVKDPRI-------------GFITITDVQVTNDLSLAKVY 50
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRV 529
++V G+E+ + L+ +++SELG R++LR+ PE++F D S E G+++
Sbjct: 51 LTVLGNEKEVDDTFKALEKAKGFIKSELGSRMRLRIVPELQFEYDHSIEYGNKI 104
[208][TOP]
>UniRef100_Q03WH5 Ribosome-binding factor A n=2 Tax=Leuconostoc mesenteroides
RepID=RBFA_LEUMM
Length = 117
Score = 68.6 bits (166), Expect = 3e-10
Identities = 40/130 (30%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MANP+R +A+++QR+++D+LL K + + E T+T V++S DLQ
Sbjct: 1 MANPQRAGRLAQEVQRDVTDLLL--KRINDPRVKEV------------TVTSVELSGDLQ 46
Query: 353 VVKVYVSVFGD-ERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRV 529
+ +Y S+ D + AGL++ + +R ELG R+ + TPE++F+ D S + G+ +
Sbjct: 47 IATIYYSILSDLASDAKKTQAGLEAASGLIRKELGSRLTVYKTPELKFVRDTSVQYGNHI 106
Query: 530 IAILDKIKNE 559
++ K+ E
Sbjct: 107 EDLIRKLHTE 116
[209][TOP]
>UniRef100_A1WXV0 Ribosome-binding factor A n=1 Tax=Halorhodospira halophila SL1
RepID=RBFA_HALHL
Length = 126
Score = 68.6 bits (166), Expect = 3e-10
Identities = 39/122 (31%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + +A+Q++REL++++ D + + +G+ TI++VQVS DL VY
Sbjct: 7 RSRRIAEQLRRELAEVIRDD-------VDDPRVGS-------VTISEVQVSRDLAHATVY 52
Query: 368 VSVFGDERGKEVAIAGLKSNAK-YVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
V+V G E + A + + A ++RS++ +RI+ + TP +RF+ D +F+RG+R+ A++D
Sbjct: 53 VTVLGAEAAEAQAGIDILNKAHGFLRSQVARRIRAKRTPSLRFLHDTAFDRGARLSALID 112
Query: 545 KI 550
++
Sbjct: 113 EV 114
[210][TOP]
>UniRef100_B4UHG2 Ribosome-binding factor A n=1 Tax=Anaeromyxobacter sp. K
RepID=RBFA_ANASK
Length = 138
Score = 68.6 bits (166), Expect = 3e-10
Identities = 40/129 (31%), Positives = 69/129 (53%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
M R VA++ + ELS +L D ++ T+T ++S DL+
Sbjct: 1 MTTHNRPARVAEEFRHELSAILARGL-------------KDPRITGFVTVTGSKMSPDLK 47
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
VYVS+ GDER ++ AGL++ A +++ E+ + ++LR TP +RF+ DES RG R+
Sbjct: 48 EATVYVSIHGDERVRKDTFAGLQAAAGFLQREVSRALRLRNTPHLRFVYDESVARGDRIE 107
Query: 533 AILDKIKNE 559
+L + + +
Sbjct: 108 RLLREARTQ 116
[211][TOP]
>UniRef100_B8JFY8 Ribosome-binding factor A n=1 Tax=Anaeromyxobacter dehalogenans
2CP-1 RepID=RBFA_ANAD2
Length = 139
Score = 68.6 bits (166), Expect = 3e-10
Identities = 40/129 (31%), Positives = 69/129 (53%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
M R VA++ + ELS +L D ++ T+T ++S DL+
Sbjct: 1 MTTHNRPARVAEEFRHELSAILARGL-------------KDPRITGFVTVTGSKMSPDLK 47
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
VYVS+ GDER ++ AGL++ A +++ E+ + ++LR TP +RF+ DES RG R+
Sbjct: 48 EATVYVSIHGDERVRKDTFAGLQAAAGFLQREVSRALRLRNTPHLRFVYDESVARGDRIE 107
Query: 533 AILDKIKNE 559
+L + + +
Sbjct: 108 RLLREARTQ 116
[212][TOP]
>UniRef100_Q6FF39 Ribosome-binding factor A n=1 Tax=Acinetobacter sp. ADP1
RepID=RBFA_ACIAD
Length = 133
Score = 68.6 bits (166), Expect = 3e-10
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 7/132 (5%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA +R+K +A +QRELS+++ + D L L TI+ V+VSAD+
Sbjct: 1 MAGSQRLKRMADSVQRELSELIRQEL-------------KDPRLGGLVTISAVKVSADMG 47
Query: 353 VVKVYVSVFGDERGKEVAIAG-------LKSNAKYVRSELGKRIKLRLTPEVRFMEDESF 511
+VYV+V G E G E + A L + ++R EL +RIK R+TP +RF D++
Sbjct: 48 YAEVYVTVMGRELGDEQSEAANKETLDVLNKASGFLRHELSRRIKTRITPRLRFHYDKTN 107
Query: 512 ERGSRVIAILDK 547
G+ + +++K
Sbjct: 108 AYGNYMFGLIEK 119
[213][TOP]
>UniRef100_C0B778 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC
27758 RepID=C0B778_9FIRM
Length = 123
Score = 68.2 bits (165), Expect = 4e-10
Identities = 31/89 (34%), Positives = 55/89 (61%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D ++ +T++ V+V+ DL+ K Y+SV GDE+ + + GL+S Y+R EL + +R
Sbjct: 29 DPRVAPMTSVVAVEVAPDLKTCKAYISVLGDEKAQADTLKGLQSAEGYIRRELAHTLNMR 88
Query: 473 LTPEVRFMEDESFERGSRVIAILDKIKNE 559
TPE++F+ D+S E G R+ +D + +
Sbjct: 89 NTPEIKFVLDQSIEYGVRMSKKIDDVTRD 117
[214][TOP]
>UniRef100_Q87M03 Ribosome-binding factor A n=2 Tax=Vibrio parahaemolyticus
RepID=RBFA_VIBPA
Length = 131
Score = 68.2 bits (165), Expect = 4e-10
Identities = 43/124 (34%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + VA+Q+Q+EL+ +L + + ++ LG + TI+DV+VS DL KV+
Sbjct: 7 RTQRVAQQLQKELAMILQRE-------VRDSRLG-------MVTISDVEVSRDLAYAKVF 52
Query: 368 VSVFG-DERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
V+ E+ E +A L+ + ++R LGKRI+LRLTPE+RF D + G R+ ++
Sbjct: 53 VTFLCVGEQTPESCLAALREHEVHIRMMLGKRIRLRLTPEIRFYYDNTLVEGMRMSNLVT 112
Query: 545 KIKN 556
++ N
Sbjct: 113 EVVN 116
[215][TOP]
>UniRef100_B8GP03 Ribosome-binding factor A n=1 Tax=Thioalkalivibrio sp. HL-EbGR7
RepID=RBFA_THISH
Length = 129
Score = 68.2 bits (165), Expect = 4e-10
Identities = 40/120 (33%), Positives = 68/120 (56%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + V QIQREL++++ + L + +G + T+ V+VS DL KV+
Sbjct: 7 RTERVGDQIQRELAELIRME-------LKDPRVG-------MVTLAGVEVSRDLAHAKVW 52
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+V G E+ GL+ A ++R ELG+R++LR P + F D++ E+G+R+ A++DK
Sbjct: 53 FTVLGSEQQIADTTEGLQRAAGFLRRELGRRMRLRTVPHLHFQYDDTQEKGARLSALIDK 112
[216][TOP]
>UniRef100_A8H739 Ribosome-binding factor A n=1 Tax=Shewanella pealeana ATCC 700345
RepID=RBFA_SHEPA
Length = 142
Score = 68.2 bits (165), Expect = 4e-10
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + +A+Q+Q+EL+ +L D + + +G T+ DV VS DL KVY
Sbjct: 7 RTRRIAQQLQQELAQVLQRD-------MKDPRIG-------FVTVNDVDVSRDLSYAKVY 52
Query: 368 VSVFG-DERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
V+ F DE+ E +A L + A Y+RS + R+KLR+ PE+RF+ D S G R+ ++
Sbjct: 53 VTFFEEDEKLVEQKVAALDAAAGYIRSLVAGRMKLRVMPELRFIYDSSLVEGMRMSNLVS 112
Query: 545 KI 550
++
Sbjct: 113 RV 114
[217][TOP]
>UniRef100_A3QGU4 Ribosome-binding factor A n=1 Tax=Shewanella loihica PV-4
RepID=RBFA_SHELP
Length = 140
Score = 68.2 bits (165), Expect = 4e-10
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + +A+Q+Q+EL+ +L D + + +G + T+ DV VS DL KVY
Sbjct: 7 RTRRIAQQLQQELAQVLQRD-------IKDPRIG-------MVTVNDVDVSRDLNYAKVY 52
Query: 368 VSVFGDERGK-EVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
V+ F +++ E +A L++ A YVRS + R+KLR+ PE+RF+ D S G R+ ++
Sbjct: 53 VTFFEEDKAVVEEKLAALEAAAGYVRSLVAGRMKLRVMPEIRFIYDASLIEGMRMSNLVS 112
Query: 545 KI 550
++
Sbjct: 113 QV 114
[218][TOP]
>UniRef100_B0TQA1 Ribosome-binding factor A n=1 Tax=Shewanella halifaxensis HAW-EB4
RepID=RBFA_SHEHH
Length = 142
Score = 68.2 bits (165), Expect = 4e-10
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + +A+Q+Q+EL+ +L D + + +G T+ DV VS DL KVY
Sbjct: 7 RTRRIAQQLQQELAQVLQRD-------MKDPRIG-------FVTVNDVDVSRDLSYAKVY 52
Query: 368 VSVFG-DERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
V+ F DE+ E +A L + A Y+RS + R+KLR+ PE+RF+ D S G R+ ++
Sbjct: 53 VTFFEEDEKLVEQKVAALDAAAGYIRSLVAGRMKLRVMPELRFIYDSSLVEGMRMSNLVS 112
Query: 545 KI 550
++
Sbjct: 113 RV 114
[219][TOP]
>UniRef100_A0AIC8 Ribosome-binding factor A n=1 Tax=Listeria welshimeri serovar 6b
str. SLCC5334 RepID=RBFA_LISW6
Length = 114
Score = 68.2 bits (165), Expect = 4e-10
Identities = 39/125 (31%), Positives = 68/125 (54%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V++Q+++EL D+L + + LG T+T V V+ DLQ KV+
Sbjct: 4 RANRVSEQMKKELGDILNRK-------IKDPRLG-------FVTVTGVDVTGDLQEAKVF 49
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+S+ G ++ KE + L ++RSE+G+RI+LR PE+ F D S G+R+ +L
Sbjct: 50 ISILGTDKEKENTLLALAKAHGFIRSEIGRRIRLRKVPEMSFEIDNSIAYGNRIDELLRD 109
Query: 548 IKNEK 562
+ +++
Sbjct: 110 LNSDQ 114
[220][TOP]
>UniRef100_B1MZH3 Ribosome-binding factor A n=1 Tax=Leuconostoc citreum KM20
RepID=RBFA_LEUCK
Length = 117
Score = 68.2 bits (165), Expect = 4e-10
Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 1/127 (0%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MANP+R +A+++QR+++D+LL + R T+T V++S DLQ
Sbjct: 1 MANPQRAGRLAQEVQRDVTDLLLK------------RINDPRVQD--VTVTSVELSGDLQ 46
Query: 353 VVKVYVSVFGDERGK-EVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRV 529
+ +Y S+ D + A AGL++ + +R ELG R+ + TPE++F+ D+S + G+ +
Sbjct: 47 IATIYYSILSDLASDGQKAQAGLEAASGLIRKELGARLTVYKTPELKFVRDQSVQYGNHI 106
Query: 530 IAILDKI 550
++ K+
Sbjct: 107 EDLIRKL 113
[221][TOP]
>UniRef100_C4ZBF3 Ribosome-binding factor A n=1 Tax=Eubacterium rectale ATCC 33656
RepID=RBFA_EUBR3
Length = 121
Score = 68.2 bits (165), Expect = 4e-10
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D ++ +T++ V+V+ DL+ K Y+SV GD++ + +AGLKS Y+R L K I LR
Sbjct: 29 DPRINPMTSVVAVEVAPDLKTAKAYISVLGDKKSQADTLAGLKSAEGYIRRTLAKNINLR 88
Query: 473 LTPEVRFMEDESFERGSRVIAILDKI-KNEK 562
TP + F+ D+S E G + +D++ KN K
Sbjct: 89 NTPAITFIIDQSIEYGVEMSKKIDEVTKNLK 119
[222][TOP]
>UniRef100_A4XL69 Ribosome-binding factor A n=1 Tax=Caldicellulosiruptor
saccharolyticus DSM 8903 RepID=RBFA_CALS8
Length = 135
Score = 68.2 bits (165), Expect = 4e-10
Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R VA++I++E+SD++ + L R + L +I V +S DL+ KV+
Sbjct: 5 RADRVAEEIKKEISDII------------QHELKDPRICAELISIVKVNMSKDLRHAKVF 52
Query: 368 VSVFGDERGKEVAIAGLKSNAK-YVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
VS+F R + NAK Y+R E+ +RI LR +PE+ F D+S E G+R+ IL+
Sbjct: 53 VSIFDKNRENITSTMKALENAKPYIRREISRRINLRFSPEISFELDDSIEYGARISQILN 112
Query: 545 KIKNEK 562
++ K
Sbjct: 113 QLNIAK 118
[223][TOP]
>UniRef100_Q1Q1G7 Similar to ribosome-binding factor A n=1 Tax=Candidatus Kuenenia
stuttgartiensis RepID=Q1Q1G7_9BACT
Length = 125
Score = 67.8 bits (164), Expect = 5e-10
Identities = 31/80 (38%), Positives = 55/80 (68%)
Frame = +2
Query: 308 SLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEV 487
S T+T+V +SADL+ VKVYVSV G+E ++ + GL ++++ELG ++++ TP +
Sbjct: 31 SFITVTEVDISADLKNVKVYVSVLGNELERKNTMCGLDHAKGFIQTELGSCLRIKYTPHL 90
Query: 488 RFMEDESFERGSRVIAILDK 547
+F DE E+ +R++ I+D+
Sbjct: 91 KFCLDELTEKRNRILKIIDE 110
[224][TOP]
>UniRef100_C9LIQ3 Ribosome-binding factor A n=1 Tax=Prevotella tannerae ATCC 51259
RepID=C9LIQ3_9BACT
Length = 134
Score = 67.8 bits (164), Expect = 5e-10
Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
Frame = +2
Query: 137 AVIGSTRRSIRCMANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLT 316
+V+ + SI R + + + IQ+ELSDML VL
Sbjct: 11 SVLSLWQNSIETNMETTRQQKIERLIQKELSDMLQRQTQQAPGVL--------------V 56
Query: 317 TITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIK--LRLTPEVR 490
+++ V++S DL V + Y+SVF ERG+E+ +A + +N K VR ELGKR++ LR+ PE++
Sbjct: 57 SVSRVRISPDLSVCRGYLSVFPSERGEEI-VANINANVKTVRFELGKRVRHQLRIIPELK 115
Query: 491 FMEDESFE 514
F D+S +
Sbjct: 116 FFIDDSLD 123
[225][TOP]
>UniRef100_B0NAD8 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
35704 RepID=B0NAD8_EUBSP
Length = 127
Score = 67.8 bits (164), Expect = 5e-10
Identities = 38/117 (32%), Positives = 64/117 (54%)
Frame = +2
Query: 200 VAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVYVSVF 379
V+ ++QRELS+++ D ++ T++ +V+ DL+ K Y+SV
Sbjct: 11 VSTEVQRELSNIIRGGI-------------KDPRVAPWTSVVTAEVAPDLKTCKAYISVL 57
Query: 380 GDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDKI 550
GD +E I GL+S Y+R EL + + LR TPE+RF+ D+S E G + +D++
Sbjct: 58 GDAHEQEETIKGLQSAEGYIRRELARTLNLRNTPEIRFVLDQSIEYGVNMSKKIDEV 114
[226][TOP]
>UniRef100_Q7MI10 Ribosome-binding factor A n=2 Tax=Vibrio vulnificus
RepID=RBFA_VIBVY
Length = 131
Score = 67.8 bits (164), Expect = 5e-10
Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + V++Q+Q+EL+ +L + + ++ LG + TI+DV+VS DL KV+
Sbjct: 7 RTQRVSQQLQKELAMILQRE-------VRDSRLG-------MVTISDVEVSRDLAYAKVF 52
Query: 368 VSVFG-DERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
V+ E+ E +A L+ + ++R LGKRI+LRLTPEVRF D + G R+ ++
Sbjct: 53 VTFLCVGEQTPESCLAALREHEVHIRMMLGKRIRLRLTPEVRFYYDNTLVEGMRMSNLVT 112
Query: 545 KIKNE 559
++ N+
Sbjct: 113 EVVNK 117
[227][TOP]
>UniRef100_Q3A4A5 Ribosome-binding factor A n=1 Tax=Pelobacter carbinolicus DSM 2380
RepID=RBFA_PELCD
Length = 119
Score = 67.8 bits (164), Expect = 5e-10
Identities = 38/125 (30%), Positives = 71/125 (56%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V +Q+Q+E+S +LL L + +G TIT V V+ D+ + +VY
Sbjct: 5 RPHRVGEQLQKEISALLLKG-------LKDPRVG-------FVTITAVSVTPDMHLARVY 50
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+V+G+E ++ GL+S + R ELG+R+++R P++ F D++ E G+R+ ++L +
Sbjct: 51 YTVYGEEEQRKETQKGLESATPFFRRELGRRLRMRYVPDLVFEFDKALEYGNRIESLLRQ 110
Query: 548 IKNEK 562
+ +K
Sbjct: 111 LNEDK 115
[228][TOP]
>UniRef100_Q1Z360 Putative ribosome-binding factor A n=1 Tax=Photobacterium profundum
3TCK RepID=Q1Z360_PHOPR
Length = 134
Score = 67.4 bits (163), Expect = 7e-10
Identities = 44/116 (37%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + VA+Q+Q+EL+ +L + L + +G +TTI+ V+VS D+ KV+
Sbjct: 7 RTQRVAQQLQKELAVILQRE-------LKDPRVG-------MTTISSVEVSRDMCYAKVF 52
Query: 368 VSVF--GDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRV 529
V+ F G++ K ++A L+ A Y+RS LGK+I+LR+TPE+ F+ DES G R+
Sbjct: 53 VTFFTIGEQTAKG-SLAVLREMAPYIRSLLGKQIRLRVTPELTFIFDESLTEGMRI 107
[229][TOP]
>UniRef100_C9P1A4 Ribosome-binding factor A n=1 Tax=Vibrio metschnikovii CIP 69.14
RepID=C9P1A4_VIBME
Length = 131
Score = 67.4 bits (163), Expect = 7e-10
Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 1/125 (0%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + VA+Q+Q+EL+ +L + + ++ LG + TI+DV+VS DL KV+
Sbjct: 7 RTQRVAQQLQKELAMILQRE-------VRDSRLG-------MVTISDVEVSRDLAYAKVF 52
Query: 368 VSVFG-DERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
V+ E+ E I L+ + ++R LGKRI+LRLTPE+RF D + G R+ ++
Sbjct: 53 VTFLCIGEQTPESCIKALREHEVHIRMMLGKRIRLRLTPEIRFHYDNTLVEGMRMSNLVT 112
Query: 545 KIKNE 559
++ N+
Sbjct: 113 EVVNQ 117
[230][TOP]
>UniRef100_C5QWN6 Ribosome-binding factor A n=1 Tax=Staphylococcus epidermidis W23144
RepID=C5QWN6_STAEP
Length = 127
Score = 67.4 bits (163), Expect = 7e-10
Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
M N R + V +Q+++E+ D ++ +KV V TITDV+++ DL
Sbjct: 11 MMNNIRAERVGEQMKQEIMD-IVNNKVKDPRV-------------GFLTITDVELTNDLS 56
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVI 532
KVY++V G+++ + L +++SELG R++LR+ PE+ F DES E G+++
Sbjct: 57 QAKVYLTVLGNDKEVDNTFKALHKATGFIKSELGSRMRLRIIPELTFEYDESIEYGNKIE 116
Query: 533 AIL-DKIKNEK 562
++ D KN+K
Sbjct: 117 RMIQDLHKNDK 127
[231][TOP]
>UniRef100_C4FWY3 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271
RepID=C4FWY3_9FIRM
Length = 119
Score = 67.4 bits (163), Expect = 7e-10
Identities = 47/127 (37%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MAN RV V ++I RE++ +LL + D + +T ITDV ++ DLQ
Sbjct: 1 MAN-YRVGRVRQEIMREVNRILLRE-------------AKDPRIEGVT-ITDVDLTGDLQ 45
Query: 353 VVKVYVSVFGDERG-KEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRV 529
++ S D+ G ++ AGLK+ VRSELGK +KL TPE+RF D S + G+R+
Sbjct: 46 QATIFYSTLSDKAGQRQKTEAGLKAVTGLVRSELGKVLKLYKTPEIRFERDRSVDYGNRI 105
Query: 530 IAILDKI 550
+L++I
Sbjct: 106 DQLLNQI 112
[232][TOP]
>UniRef100_Q49X58 Ribosome-binding factor A n=1 Tax=Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305 RepID=RBFA_STAS1
Length = 114
Score = 67.4 bits (163), Expect = 7e-10
Identities = 30/71 (42%), Positives = 49/71 (69%)
Frame = +2
Query: 317 TITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFM 496
TITDVQ++ DL + VY++V G+E+ K GL+ +++SELG R++LR+ PE+ F
Sbjct: 33 TITDVQLTNDLSIATVYLTVLGNEKQKADTFKGLEKAKGFIKSELGSRMRLRIIPELNFE 92
Query: 497 EDESFERGSRV 529
DES + G+++
Sbjct: 93 YDESIDYGNKI 103
[233][TOP]
>UniRef100_Q609C1 Ribosome-binding factor A n=1 Tax=Methylococcus capsulatus
RepID=RBFA_METCA
Length = 119
Score = 67.4 bits (163), Expect = 7e-10
Identities = 40/124 (32%), Positives = 63/124 (50%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R V+ Q+QRE+++ L T G D + T++DV VS DL V KV+
Sbjct: 7 RSDRVSAQMQREIAEFLRT--------------GIDAPELGMVTVSDVDVSRDLAVAKVF 52
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
V+ G A+ L A +R LG+R+++R+ PE+RF D+S ERG + +L
Sbjct: 53 VTFLGARLETRAAVKRLGEFAPQLRQVLGRRMRMRIIPEIRFAYDDSLERGLHMDEVLRS 112
Query: 548 IKNE 559
+ +
Sbjct: 113 LNKD 116
[234][TOP]
>UniRef100_Q1K0G2 Ribosome-binding factor A n=1 Tax=Desulfuromonas acetoxidans DSM
684 RepID=Q1K0G2_DESAC
Length = 119
Score = 67.0 bits (162), Expect = 9e-10
Identities = 42/119 (35%), Positives = 64/119 (53%)
Frame = +2
Query: 185 RRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKV 364
+R VA+QI +E+SD++L L + +G TIT V +S+DL+ K+
Sbjct: 4 QRTYRVAEQIHKEISDIMLRG-------LRDPRVG-------FVTITSVDISSDLRHAKI 49
Query: 365 YVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAIL 541
+ +V G+E E GL S ++R ELGKR+KLR P++ F D S GS + +L
Sbjct: 50 FFTVMGEEADAEKTQQGLDSAVPFLRRELGKRMKLRHVPDLVFKYDTSIAYGSHIEELL 108
[235][TOP]
>UniRef100_C9QMX9 Ribosome-binding factor A n=1 Tax=Vibrio orientalis CIP 102891
RepID=C9QMX9_VIBOR
Length = 135
Score = 67.0 bits (162), Expect = 9e-10
Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 1/125 (0%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + VA+Q+Q+EL+ +L + + ++ LG + TI+DV+VS DL KV+
Sbjct: 7 RTQRVAQQLQKELAMILQRE-------VRDSRLG-------MVTISDVEVSRDLAYAKVF 52
Query: 368 VSVFG-DERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
V+ E+ E + L+ + ++R LGKRI+LRLTPEVRF D + G R+ ++
Sbjct: 53 VTFLCIGEQTPESCLEALREHEVHIRMMLGKRIRLRLTPEVRFYYDNTLVEGMRMSNLVS 112
Query: 545 KIKNE 559
++ +E
Sbjct: 113 EVVSE 117
[236][TOP]
>UniRef100_C7R7H8 Ribosome-binding factor A n=1 Tax=Kangiella koreensis DSM 16069
RepID=C7R7H8_KANKD
Length = 122
Score = 67.0 bits (162), Expect = 9e-10
Identities = 41/126 (32%), Positives = 73/126 (57%), Gaps = 2/126 (1%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R K VA QIQR+L+ +L + + + LG + T++ V+V++DLQ KV+
Sbjct: 5 RAKRVADQIQRDLAVLLQRE-------MKDPRLG-------IVTVSGVEVTSDLQNAKVF 50
Query: 368 VSVFGDERGKEV--AIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAIL 541
V+ G + +E+ A+ L A ++RS+L K I++R P +RF+ D+S G ++ +++
Sbjct: 51 VTFLGKDEEQEIKQALEVLTGAAGFLRSQLAKSIRMRSVPSLRFLFDKSIVEGQKMTSLI 110
Query: 542 DKIKNE 559
DK +E
Sbjct: 111 DKAISE 116
[237][TOP]
>UniRef100_UPI0001BB9F31 ribosome-binding factor A n=1 Tax=Acinetobacter junii SH205
RepID=UPI0001BB9F31
Length = 133
Score = 66.6 bits (161), Expect = 1e-09
Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA +R+K +A +QRELS+++ + D L L TI+ V+VSADL
Sbjct: 1 MAGSQRLKRMADSVQRELSELIRQEL-------------KDPRLGGLVTISAVKVSADLG 47
Query: 353 VVKVYVSVFGDERGKEVAIAG-------LKSNAKYVRSELGKRIKLRLTPEVRFMEDESF 511
+VYV+V G E G E + A L + ++R EL +RIK R+TP +RF D++
Sbjct: 48 YAEVYVTVMGRELGDEQSEAANKETLDVLNKASGFLRHELSRRIKTRITPRLRFHYDKTN 107
Query: 512 ERGSRVIAIL 541
G+ + ++
Sbjct: 108 AYGNYMFGLI 117
[238][TOP]
>UniRef100_UPI0001BB8873 ribosome-binding factor A n=1 Tax=Acinetobacter johnsonii SH046
RepID=UPI0001BB8873
Length = 134
Score = 66.6 bits (161), Expect = 1e-09
Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Frame = +2
Query: 173 MANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQ 352
MA +R+K +A +QRELS+++ + D L L TI+ V+VS DL
Sbjct: 1 MAGSQRLKRMADTVQRELSELIRQEL-------------KDPRLGGLVTISAVKVSPDLG 47
Query: 353 VVKVYVSVFGDERGKEVAIAGLKSN-------AKYVRSELGKRIKLRLTPEVRFMEDESF 511
+VYV+V G E G E + A K + ++R ELG+RIK R+TP +RF D++
Sbjct: 48 YAEVYVTVMGRELGDEQSEAANKETLDVLNKASGFLRHELGRRIKTRITPRLRFHYDKTN 107
Query: 512 ERGSRVIAIL 541
G+ + ++
Sbjct: 108 AYGNYMFGLI 117
[239][TOP]
>UniRef100_UPI0001B44111 ribosome-binding factor A n=1 Tax=Listeria monocytogenes FSL J1-208
RepID=UPI0001B44111
Length = 106
Score = 66.6 bits (161), Expect = 1e-09
Identities = 31/82 (37%), Positives = 51/82 (62%)
Frame = +2
Query: 317 TITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFM 496
T+T V V+ DLQ KV++S+ G ++ KE + L ++RSE+G+RI+LR PE+ F
Sbjct: 25 TVTGVDVTGDLQEAKVFISILGTDKEKENTLLALAKAHGFIRSEIGRRIRLRKVPEMSFE 84
Query: 497 EDESFERGSRVIAILDKIKNEK 562
D S G+R+ +L + N++
Sbjct: 85 IDNSIAYGNRIDELLRDLNNDQ 106
[240][TOP]
>UniRef100_UPI00005F5B44 ribosome-binding factor A n=1 Tax=Vibrio sp. Ex25
RepID=UPI00005F5B44
Length = 131
Score = 66.6 bits (161), Expect = 1e-09
Identities = 42/122 (34%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + VA+Q+Q+EL+ +L + + ++ LG + TI+DV+VS DL KV+
Sbjct: 7 RTQRVAQQLQKELAMILQRE-------VRDSRLG-------MVTISDVEVSRDLAYAKVF 52
Query: 368 VSVFG-DERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
V+ E+ E +A L+ + ++R LGKRI+LRLTPE+RF D + G R+ ++
Sbjct: 53 VTFLCVGEQTPESCLAALREHEVHIRMMLGKRIRLRLTPEIRFHYDNTLVEGMRMSNLVS 112
Query: 545 KI 550
++
Sbjct: 113 EV 114
[241][TOP]
>UniRef100_Q1V530 Ribosome-binding factor A n=1 Tax=Vibrio alginolyticus 12G01
RepID=Q1V530_VIBAL
Length = 131
Score = 66.6 bits (161), Expect = 1e-09
Identities = 42/122 (34%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + VA+Q+Q+EL+ +L + + ++ LG + TI+DV+VS DL KV+
Sbjct: 7 RTQRVAQQLQKELAMILQRE-------VRDSRLG-------MVTISDVEVSRDLAYAKVF 52
Query: 368 VSVFG-DERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
V+ E+ E +A L+ + ++R LGKRI+LRLTPE+RF D + G R+ ++
Sbjct: 53 VTFLCVGEQTPESCLAALREHEVHIRMMLGKRIRLRLTPEIRFHYDNTLVEGMRMSNLVS 112
Query: 545 KI 550
++
Sbjct: 113 EV 114
[242][TOP]
>UniRef100_C9PRG2 Ribosome-binding factor A n=1 Tax=Pasteurella dagmatis ATCC 43325
RepID=C9PRG2_9PAST
Length = 140
Score = 66.6 bits (161), Expect = 1e-09
Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 4/122 (3%)
Frame = +2
Query: 197 MVAKQIQREL--SDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVYV 370
M KQ+ RE SD + + + AV+ + + R + T++DV+VS+DL KV+V
Sbjct: 1 MKEKQMAREFKRSDRVAQEIQKEIAVILQREVKDPRI--GMVTVSDVEVSSDLAYAKVFV 58
Query: 371 SVF--GDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILD 544
+ DE E + GL+ + Y+RS LGK ++LR+ PE+RF+ D S G R+ ++
Sbjct: 59 TFLFDNDESAIEAGMKGLEKASPYIRSLLGKAMRLRIVPEIRFIYDRSLIEGMRMSNLVT 118
Query: 545 KI 550
+
Sbjct: 119 SV 120
[243][TOP]
>UniRef100_C6QJ07 Ribosome-binding factor A n=1 Tax=Hyphomicrobium denitrificans ATCC
51888 RepID=C6QJ07_9RHIZ
Length = 132
Score = 66.6 bits (161), Expect = 1e-09
Identities = 42/135 (31%), Positives = 71/135 (52%)
Frame = +2
Query: 149 STRRSIRCMANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITD 328
S +++ A +R+ V + I+ ++++ML ++ D S + TI +
Sbjct: 3 SKHKTLPSKAPSQRMLRVGELIRHKIAEMLSRGEIHD-----------DVLASHVITIPE 51
Query: 329 VQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDES 508
V++S DL++ VYV G K V I L N KY+R+E+ + LR P++RF EDE+
Sbjct: 52 VRLSPDLKLATVYVMPLGGNDVKPV-IEALTRNKKYIRAEVAHTLNLRYAPDLRFREDET 110
Query: 509 FERGSRVIAILDKIK 553
FE +R+ +LD K
Sbjct: 111 FEEATRIDRLLDSEK 125
[244][TOP]
>UniRef100_Q5HPS1 Ribosome-binding factor A n=3 Tax=Staphylococcus epidermidis
RepID=RBFA_STAEQ
Length = 116
Score = 66.6 bits (161), Expect = 1e-09
Identities = 40/129 (31%), Positives = 73/129 (56%), Gaps = 1/129 (0%)
Frame = +2
Query: 179 NPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVV 358
N R + V +Q+++E+ D ++ +KV V TITDV+++ DL
Sbjct: 2 NNIRAERVGEQMKQEIMD-IVNNKVKDPRV-------------GFLTITDVELTNDLSQA 47
Query: 359 KVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAI 538
KVY++V G+++ + L +++SELG R++LR+ PE+ F DES E G+++ +
Sbjct: 48 KVYLTVLGNDKEVDNTFKALHKATGFIKSELGSRMRLRIIPELTFEYDESIEYGNKIERM 107
Query: 539 LDKI-KNEK 562
+ ++ KN+K
Sbjct: 108 IQELHKNDK 116
[245][TOP]
>UniRef100_B9Z537 Ribosome-binding factor A n=1 Tax=Lutiella nitroferrum 2002
RepID=B9Z537_9NEIS
Length = 132
Score = 66.6 bits (161), Expect = 1e-09
Identities = 39/124 (31%), Positives = 68/124 (54%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R +++QIQREL+++L G + TIT V+V+ D K+Y
Sbjct: 10 RADRISEQIQRELAELLRK--------------GLKDPRAGWITITSVEVTRDYSHAKIY 55
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+V D++ +EV L+ A Y+RSELG+ +++ TP++ F+ DES ERG + ++++
Sbjct: 56 YTVM-DDKTREVTQEALEHAAGYLRSELGRALQIFTTPQLHFVYDESIERGMHMTRLINQ 114
Query: 548 IKNE 559
+ E
Sbjct: 115 VSEE 118
[246][TOP]
>UniRef100_B0NZN4 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1
RepID=B0NZN4_9CLOT
Length = 123
Score = 66.6 bits (161), Expect = 1e-09
Identities = 32/88 (36%), Positives = 53/88 (60%)
Frame = +2
Query: 293 DRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLR 472
D ++ +T++ D V++DL+ K Y+SV G++ KE + GL S Y+R EL I LR
Sbjct: 29 DPRIAPMTSVVDAVVTSDLKQCKAYISVLGNDEEKEETMKGLNSAVGYIRRELAHSINLR 88
Query: 473 LTPEVRFMEDESFERGSRVIAILDKIKN 556
TPE+ F+ D+S E G + +D++ +
Sbjct: 89 NTPEITFILDDSIEYGVNMSKKIDELNH 116
[247][TOP]
>UniRef100_A8R7M1 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM
3991 RepID=A8R7M1_9FIRM
Length = 120
Score = 66.6 bits (161), Expect = 1e-09
Identities = 39/121 (32%), Positives = 69/121 (57%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
+ + +A IQ+E+S+ ++QF L + +G TITDV VS DL + KVY
Sbjct: 12 KTEKIAGIIQKEVSE------IIQFQ-LKDPKIG-------FITITDVVVSGDLSIAKVY 57
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
VS G + + + L+ + ++RSEL KR+ +R P + F+ D+S E+G+++ I+ +
Sbjct: 58 VSFLGQKAREAAGMKALERSKGFIRSELAKRMTIRKVPSLVFLIDDSLEKGNKIENIIKE 117
Query: 548 I 550
+
Sbjct: 118 L 118
[248][TOP]
>UniRef100_Q82WC9 Ribosome-binding factor A n=1 Tax=Nitrosomonas europaea
RepID=RBFA_NITEU
Length = 117
Score = 66.6 bits (161), Expect = 1e-09
Identities = 38/120 (31%), Positives = 69/120 (57%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R VA QIQREL+ +L+ ++++ V + T+T V+V+ D KV+
Sbjct: 7 RTVRVADQIQRELA-LLIQNEIMDPRV-------------GMVTLTGVEVTRDYAYAKVF 52
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+ G + ++ GLK A ++RS+L +I+LR+ P+++F+ DES ERG ++ ++D+
Sbjct: 53 YTTLGGDENIQLVEEGLKHAAGFLRSQLAGKIRLRVVPQLQFVYDESVERGMKLSRLIDE 112
[249][TOP]
>UniRef100_Q0AFJ4 Ribosome-binding factor A n=1 Tax=Nitrosomonas eutropha C91
RepID=RBFA_NITEC
Length = 117
Score = 66.6 bits (161), Expect = 1e-09
Identities = 37/120 (30%), Positives = 68/120 (56%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R VA Q+QREL+ ++ + + + +G + T+T V+V+ D KV+
Sbjct: 7 RTLRVADQVQRELASLIQNE-------IMDPRIG-------MITLTGVEVTRDYTYAKVF 52
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+ G ++A GLK A ++RS+L +I+LR+ P+++F+ DES ERG ++ ++D+
Sbjct: 53 YTTLGGNENAQLAEEGLKRAAGFLRSQLAGKIRLRIIPKLQFVYDESIERGIKLSRLIDE 112
[250][TOP]
>UniRef100_A8ZZ63 Ribosome-binding factor A n=1 Tax=Desulfococcus oleovorans Hxd3
RepID=RBFA_DESOH
Length = 129
Score = 66.6 bits (161), Expect = 1e-09
Identities = 41/125 (32%), Positives = 62/125 (49%)
Frame = +2
Query: 188 RVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVY 367
R + IQR +S++L LG R + TIT V+VS DL V VY
Sbjct: 6 RADRIGSSIQRGVSEIL------------RKGLGDPRL--DMATITGVKVSRDLGVAYVY 51
Query: 368 VSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDK 547
+ GD G+ A AG KS +++ L +K++ P++RF DESF G + +L +
Sbjct: 52 YVIPGDTAGRAAAAAGFKSAEGFIKRSLAGMLKMKYMPDIRFRYDESFAYGQSIDTVLRE 111
Query: 548 IKNEK 562
++ EK
Sbjct: 112 LQTEK 116