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[1][TOP]
>UniRef100_Q9BBS8 DNA-directed RNA polymerase subunit beta' n=1 Tax=Lotus japonicus
RepID=RPOC1_LOTJA
Length = 682
Score = 272 bits (696), Expect = 7e-72
Identities = 135/135 (100%), Positives = 135/135 (100%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL
Sbjct: 252 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 311
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE
Sbjct: 312 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 371
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 372 TLLGKRVDYSGRSVI 386
[2][TOP]
>UniRef100_B5LMM5 DNA-directed RNA polymerase n=1 Tax=Cicer arietinum
RepID=B5LMM5_CICAR
Length = 684
Score = 271 bits (693), Expect = 2e-71
Identities = 134/135 (99%), Positives = 135/135 (100%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL
Sbjct: 252 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 311
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSDIIEGKEGRFRE
Sbjct: 312 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRE 371
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 372 TLLGKRVDYSGRSVI 386
[3][TOP]
>UniRef100_Q4VZP2 DNA-directed RNA polymerase subunit beta' n=1 Tax=Cucumis sativus
RepID=RPOC1_CUCSA
Length = 680
Score = 271 bits (692), Expect = 2e-71
Identities = 133/135 (98%), Positives = 135/135 (100%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[4][TOP]
>UniRef100_Q8HVY4 DNA-directed RNA polymerase subunit beta' n=1 Tax=Glycine max
RepID=RPOC1_SOYBN
Length = 687
Score = 270 bits (691), Expect = 3e-71
Identities = 133/135 (98%), Positives = 135/135 (100%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHF+RTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL
Sbjct: 252 LAKHFLRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 311
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSDIIEGKEGRFRE
Sbjct: 312 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRE 371
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 372 TLLGKRVDYSGRSVI 386
[5][TOP]
>UniRef100_C0LE65 DNA-directed RNA polymerase n=1 Tax=Jatropha curcas
RepID=C0LE65_9ROSI
Length = 680
Score = 270 bits (690), Expect = 4e-71
Identities = 132/135 (97%), Positives = 135/135 (100%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
T+LGKRVDYSGRSVI
Sbjct: 370 TMLGKRVDYSGRSVI 384
[6][TOP]
>UniRef100_B1NWE1 DNA-directed RNA polymerase subunit beta' n=1 Tax=Manihot esculenta
RepID=RPOC1_MANES
Length = 680
Score = 270 bits (690), Expect = 4e-71
Identities = 132/135 (97%), Positives = 135/135 (100%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
T+LGKRVDYSGRSVI
Sbjct: 370 TMLGKRVDYSGRSVI 384
[7][TOP]
>UniRef100_Q09X26 DNA-directed RNA polymerase subunit beta' n=1 Tax=Morus indica
RepID=RPOC1_MORIN
Length = 684
Score = 270 bits (689), Expect = 5e-71
Identities = 133/135 (98%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTL DNGIRGQPM+DGHNKVYKSFSDIIEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLFDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[8][TOP]
>UniRef100_Q09MI7 DNA-directed RNA polymerase subunit beta' n=1 Tax=Citrus sinensis
RepID=RPOC1_CITSI
Length = 680
Score = 270 bits (689), Expect = 5e-71
Identities = 131/135 (97%), Positives = 135/135 (100%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHF+RTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL
Sbjct: 250 LAKHFLRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNK+YKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKIYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[9][TOP]
>UniRef100_A4GGA6 DNA-directed RNA polymerase subunit beta' n=1 Tax=Phaseolus
vulgaris RepID=RPOC1_PHAVU
Length = 684
Score = 269 bits (688), Expect = 6e-71
Identities = 132/135 (97%), Positives = 135/135 (100%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQ+DGGKLMSSDINELYRRVIYRNNTLIDL
Sbjct: 252 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQVDGGKLMSSDINELYRRVIYRNNTLIDL 311
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELV+CQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSDIIEGKEGRFRE
Sbjct: 312 LTTSRSTPGELVICQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRE 371
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 372 TLLGKRVDYSGRSVI 386
[10][TOP]
>UniRef100_Q0ZJ29 DNA-directed RNA polymerase subunit beta' n=1 Tax=Vitis vinifera
RepID=RPOC1_VITVI
Length = 682
Score = 269 bits (687), Expect = 8e-71
Identities = 132/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[11][TOP]
>UniRef100_P12116 DNA-directed RNA polymerase subunit beta' n=1 Tax=Nicotiana tabacum
RepID=RPOC1_TOBAC
Length = 680
Score = 269 bits (687), Expect = 8e-71
Identities = 132/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 249 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 308
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 309 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 368
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 369 TLLGKRVDYSGRSVI 383
[12][TOP]
>UniRef100_Q2MIJ6 DNA-directed RNA polymerase subunit beta' n=2 Tax=Solanum
RepID=RPOC1_SOLBU
Length = 681
Score = 269 bits (687), Expect = 8e-71
Identities = 132/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[13][TOP]
>UniRef100_Q589B9 DNA-directed RNA polymerase subunit beta' n=1 Tax=Silene latifolia
RepID=RPOC1_SILLA
Length = 687
Score = 269 bits (687), Expect = 8e-71
Identities = 132/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 253 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 312
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 313 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 372
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 373 TLLGKRVDYSGRSVI 387
[14][TOP]
>UniRef100_Q68S15 DNA-directed RNA polymerase subunit beta' n=1 Tax=Panax ginseng
RepID=RPOC1_PANGI
Length = 682
Score = 269 bits (687), Expect = 8e-71
Identities = 132/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[15][TOP]
>UniRef100_Q3C1G8 DNA-directed RNA polymerase subunit beta' n=1 Tax=Nicotiana
sylvestris RepID=RPOC1_NICSY
Length = 681
Score = 269 bits (687), Expect = 8e-71
Identities = 132/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[16][TOP]
>UniRef100_Q2L8Z4 DNA-directed RNA polymerase subunit beta' n=1 Tax=Gossypium
hirsutum RepID=RPOC1_GOSHI
Length = 685
Score = 269 bits (687), Expect = 8e-71
Identities = 132/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[17][TOP]
>UniRef100_B2XWP0 DNA-directed RNA polymerase subunit beta' n=1 Tax=Fagopyrum
esculentum subsp. ancestrale RepID=RPOC1_FAGEA
Length = 676
Score = 269 bits (687), Expect = 8e-71
Identities = 132/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 246 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 305
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 306 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 365
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 366 TLLGKRVDYSGRSVI 380
[18][TOP]
>UniRef100_B1A926 DNA-directed RNA polymerase subunit beta' n=1 Tax=Carica papaya
RepID=RPOC1_CARPA
Length = 680
Score = 269 bits (687), Expect = 8e-71
Identities = 132/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[19][TOP]
>UniRef100_Q8S8Y0 DNA-directed RNA polymerase subunit beta' n=1 Tax=Atropa belladonna
RepID=RPOC1_ATRBE
Length = 681
Score = 269 bits (687), Expect = 8e-71
Identities = 132/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[20][TOP]
>UniRef100_A9L987 DNA-directed RNA polymerase subunit beta' n=1 Tax=Lemna minor
RepID=RPOC1_LEMMI
Length = 690
Score = 268 bits (686), Expect = 1e-70
Identities = 131/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+EPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 257 LAKHFIRTNVEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 316
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 317 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 376
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 377 TLLGKRVDYSGRSVI 391
[21][TOP]
>UniRef100_A4QJJ0 DNA-directed RNA polymerase subunit beta' n=1 Tax=Aethionema
grandiflorum RepID=RPOC1_AETGR
Length = 680
Score = 268 bits (686), Expect = 1e-70
Identities = 132/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI+GGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIEGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[22][TOP]
>UniRef100_A4GYP9 DNA-directed RNA polymerase subunit beta' n=1 Tax=Populus
trichocarpa RepID=RPOC1_POPTR
Length = 689
Score = 268 bits (685), Expect = 1e-70
Identities = 131/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 257 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 316
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 317 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 376
Query: 364 TLLGKRVDYSGRSVI 408
T+LGKRVDYSGRSVI
Sbjct: 377 TMLGKRVDYSGRSVI 391
[23][TOP]
>UniRef100_Q14FG6 DNA-directed RNA polymerase subunit beta' n=1 Tax=Populus alba
RepID=RPOC1_POPAL
Length = 682
Score = 268 bits (685), Expect = 1e-70
Identities = 131/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
T+LGKRVDYSGRSVI
Sbjct: 370 TMLGKRVDYSGRSVI 384
[24][TOP]
>UniRef100_Q49L07 DNA-directed RNA polymerase subunit beta' n=1 Tax=Eucalyptus
globulus subsp. globulus RepID=RPOC1_EUCGG
Length = 682
Score = 268 bits (685), Expect = 1e-70
Identities = 131/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHF+RTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFLRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[25][TOP]
>UniRef100_A0ZZ26 DNA-directed RNA polymerase subunit beta' n=1 Tax=Gossypium
barbadense RepID=RPOC1_GOSBA
Length = 694
Score = 268 bits (684), Expect = 2e-70
Identities = 131/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLG+RVDYSGRSVI
Sbjct: 370 TLLGRRVDYSGRSVI 384
[26][TOP]
>UniRef100_P46819 DNA-directed RNA polymerase subunit beta' n=1 Tax=Sinapis alba
RepID=RPOC1_SINAL
Length = 688
Score = 267 bits (683), Expect = 2e-70
Identities = 131/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI+GGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 258 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIEGGKLMSSDINELYRRVIYRNNTLTDL 317
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 318 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 377
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 378 TLLGKRVDYSGRSVI 392
[27][TOP]
>UniRef100_A4QJS4 DNA-directed RNA polymerase subunit beta' n=1 Tax=Olimarabidopsis
pumila RepID=RPOC1_OLIPU
Length = 680
Score = 267 bits (683), Expect = 2e-70
Identities = 131/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI+GGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIEGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[28][TOP]
>UniRef100_A4QLS4 DNA-directed RNA polymerase subunit beta' n=1 Tax=Nasturtium
officinale RepID=RPOC1_NASOF
Length = 680
Score = 267 bits (683), Expect = 2e-70
Identities = 131/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI+GGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIEGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[29][TOP]
>UniRef100_A4QL97 DNA-directed RNA polymerase subunit beta' n=1 Tax=Lepidium
virginicum RepID=RPOC1_LEPVR
Length = 680
Score = 267 bits (683), Expect = 2e-70
Identities = 131/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI+GGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIEGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[30][TOP]
>UniRef100_A7Y3B6 DNA-directed RNA polymerase subunit beta' n=1 Tax=Ipomoea purpurea
RepID=RPOC1_IPOPU
Length = 687
Score = 267 bits (683), Expect = 2e-70
Identities = 130/135 (96%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHF+RTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 257 LAKHFLRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 316
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNK+YKSFSD+IEGKEGRFRE
Sbjct: 317 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKIYKSFSDLIEGKEGRFRE 376
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 377 TLLGKRVDYSGRSVI 391
[31][TOP]
>UniRef100_A4QL10 DNA-directed RNA polymerase subunit beta' n=1 Tax=Draba nemorosa
RepID=RPOC1_DRANE
Length = 680
Score = 267 bits (683), Expect = 2e-70
Identities = 131/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI+GGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIEGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[32][TOP]
>UniRef100_A4QKS2 DNA-directed RNA polymerase subunit beta' n=1 Tax=Crucihimalaya
wallichii RepID=RPOC1_CRUWA
Length = 680
Score = 267 bits (683), Expect = 2e-70
Identities = 131/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI+GGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIEGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[33][TOP]
>UniRef100_A4QKI3 DNA-directed RNA polymerase subunit beta' n=1 Tax=Capsella
bursa-pastoris RepID=RPOC1_CAPBU
Length = 680
Score = 267 bits (683), Expect = 2e-70
Identities = 131/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI+GGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIEGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[34][TOP]
>UniRef100_A4QK96 DNA-directed RNA polymerase subunit beta' n=1 Tax=Barbarea verna
RepID=RPOC1_BARVE
Length = 680
Score = 267 bits (683), Expect = 2e-70
Identities = 131/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI+GGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIEGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[35][TOP]
>UniRef100_P56763 DNA-directed RNA polymerase subunit beta' n=1 Tax=Arabidopsis
thaliana RepID=RPOC1_ARATH
Length = 680
Score = 267 bits (683), Expect = 2e-70
Identities = 131/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI+GGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIEGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[36][TOP]
>UniRef100_A4QJA6 DNA-directed RNA polymerase subunit beta' n=1 Tax=Aethionema
cordifolium RepID=RPOC1_AETCO
Length = 680
Score = 267 bits (683), Expect = 2e-70
Identities = 131/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI+GGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIEGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[37][TOP]
>UniRef100_A4QLI5 DNA-directed RNA polymerase subunit beta' n=1 Tax=Lobularia
maritima RepID=RPOC1_LOBMA
Length = 680
Score = 267 bits (682), Expect = 3e-70
Identities = 130/135 (96%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQ++GGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQVEGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[38][TOP]
>UniRef100_A4QK09 DNA-directed RNA polymerase subunit beta' n=1 Tax=Arabis hirsuta
RepID=RPOC1_ARAHI
Length = 680
Score = 267 bits (682), Expect = 3e-70
Identities = 130/135 (96%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWM+LCLLPVLPPELRPIIQI+GGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMILCLLPVLPPELRPIIQIEGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[39][TOP]
>UniRef100_A9QBJ7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Musa acuminata
RepID=A9QBJ7_MUSAC
Length = 695
Score = 266 bits (681), Expect = 4e-70
Identities = 130/135 (96%), Positives = 133/135 (98%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+EPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 262 LAKHFIRTNVEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 321
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
L TSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 322 LATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 381
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 382 TLLGKRVDYSGRSVI 396
[40][TOP]
>UniRef100_Q4FFX9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Yucca schidigera
RepID=Q4FFX9_9ASPA
Length = 693
Score = 266 bits (680), Expect = 5e-70
Identities = 129/135 (95%), Positives = 133/135 (98%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+EPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 264 LAKHFIRTNVEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 323
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
L TSRSTPGEL+MCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 324 LATSRSTPGELIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 383
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 384 TLLGKRVDYSGRSVI 398
[41][TOP]
>UniRef100_Q09G55 DNA-directed RNA polymerase subunit beta' n=1 Tax=Platanus
occidentalis RepID=RPOC1_PLAOC
Length = 682
Score = 266 bits (680), Expect = 5e-70
Identities = 130/135 (96%), Positives = 133/135 (98%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+EPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNVEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGE VMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGESVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[42][TOP]
>UniRef100_A8W3B5 DNA-directed RNA polymerase subunit beta' n=1 Tax=Cuscuta exaltata
RepID=RPOC1_CUSEX
Length = 691
Score = 266 bits (680), Expect = 5e-70
Identities = 131/135 (97%), Positives = 133/135 (98%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
L KHFIRTNIEP+WMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 257 LVKHFIRTNIEPKWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 316
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSDIIEGKEGRFRE
Sbjct: 317 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRE 376
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 377 TLLGKRVDYSGRSVI 391
[43][TOP]
>UniRef100_UPI0001596BBD RNA polymerase beta n=1 Tax=Medicago truncatula RepID=UPI0001596BBD
Length = 668
Score = 266 bits (679), Expect = 7e-70
Identities = 132/135 (97%), Positives = 133/135 (98%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
L KHFIRTNIEPEWMVL LLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL
Sbjct: 236 LVKHFIRTNIEPEWMVLSLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 295
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSDIIEGKEGRFRE
Sbjct: 296 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRE 355
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 356 TLLGKRVDYSGRSVI 370
[44][TOP]
>UniRef100_A9QAV1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anethum graveolens
RepID=A9QAV1_9APIA
Length = 544
Score = 266 bits (679), Expect = 7e-70
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +1
Query: 7 AKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLL 186
AKHFIRTNI+PEWMVLCLLPVLPPELRPI+QIDGGKLMSSDINELYRRVIYRNNTL DLL
Sbjct: 251 AKHFIRTNIDPEWMVLCLLPVLPPELRPIVQIDGGKLMSSDINELYRRVIYRNNTLTDLL 310
Query: 187 TTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRET 366
TTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRET
Sbjct: 311 TTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRET 370
Query: 367 LLGKRVDYSGRSVI 408
LLGKRVDYSGRSVI
Sbjct: 371 LLGKRVDYSGRSVI 384
[45][TOP]
>UniRef100_P11705 DNA-directed RNA polymerase subunit beta' n=1 Tax=Spinacia oleracea
RepID=RPOC1_SPIOL
Length = 677
Score = 266 bits (679), Expect = 7e-70
Identities = 130/135 (96%), Positives = 133/135 (98%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
L KHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LVKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
L+TSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LSTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[46][TOP]
>UniRef100_A9Y369 DNA-directed RNA polymerase n=1 Tax=Papaver somniferum
RepID=A9Y369_PAPSO
Length = 682
Score = 265 bits (678), Expect = 9e-70
Identities = 130/135 (96%), Positives = 133/135 (98%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+E EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNVEAEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[47][TOP]
>UniRef100_Q33C47 DNA-directed RNA polymerase subunit beta' n=1 Tax=Nicotiana
tomentosiformis RepID=RPOC1_NICTO
Length = 681
Score = 265 bits (678), Expect = 9e-70
Identities = 131/135 (97%), Positives = 133/135 (98%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTP ELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPVELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[48][TOP]
>UniRef100_Q0G9X1 DNA-directed RNA polymerase subunit beta' n=1 Tax=Daucus carota
RepID=RPOC1_DAUCA
Length = 677
Score = 265 bits (678), Expect = 9e-70
Identities = 128/135 (94%), Positives = 134/135 (99%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNI+P+WMVLCLLPVLPPELRPI+QIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIDPKWMVLCLLPVLPPELRPIVQIDGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGEL+MCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[49][TOP]
>UniRef100_Q4FFY2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nuphar advena
RepID=Q4FFY2_NUPAD
Length = 686
Score = 265 bits (677), Expect = 1e-69
Identities = 129/135 (95%), Positives = 133/135 (98%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHF+RTN+EPEWMVLCLLPVLPPELRPIIQIDGGK MSSDINELYRRVIYRNNTL DL
Sbjct: 254 LAKHFLRTNVEPEWMVLCLLPVLPPELRPIIQIDGGKPMSSDINELYRRVIYRNNTLTDL 313
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 314 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 373
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 374 TLLGKRVDYSGRSVI 388
[50][TOP]
>UniRef100_A1XFU6 DNA-directed RNA polymerase subunit beta' n=1 Tax=Nuphar advena
RepID=RPOC1_NUPAD
Length = 693
Score = 265 bits (677), Expect = 1e-69
Identities = 129/135 (95%), Positives = 133/135 (98%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHF+RTN+EPEWMVLCLLPVLPPELRPIIQIDGGK MSSDINELYRRVIYRNNTL DL
Sbjct: 257 LAKHFLRTNVEPEWMVLCLLPVLPPELRPIIQIDGGKPMSSDINELYRRVIYRNNTLTDL 316
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 317 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 376
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 377 TLLGKRVDYSGRSVI 391
[51][TOP]
>UniRef100_A9QBA4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Elaeis oleifera
RepID=A9QBA4_ELAOL
Length = 685
Score = 265 bits (676), Expect = 2e-69
Identities = 129/135 (95%), Positives = 132/135 (97%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+EPEWMVLCLLPVLPPELRPIIQ DGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 255 LAKHFIRTNVEPEWMVLCLLPVLPPELRPIIQTDGGKLMSSDINELYRRVIYRNNTLTDL 314
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
L TSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 315 LATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 374
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 375 TLLGKRVDYSGRSVI 389
[52][TOP]
>UniRef100_A9Y368 DNA-directed RNA polymerase n=1 Tax=Papaver somniferum
RepID=A9Y368_PAPSO
Length = 682
Score = 264 bits (675), Expect = 2e-69
Identities = 129/135 (95%), Positives = 133/135 (98%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+E EWMVLCLLPVLPP+LRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNVEAEWMVLCLLPVLPPDLRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[53][TOP]
>UniRef100_A0A326 DNA-directed RNA polymerase subunit beta' n=1 Tax=Coffea arabica
RepID=RPOC1_COFAR
Length = 683
Score = 264 bits (675), Expect = 2e-69
Identities = 131/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
L KHFIRTNIEPEWMVL LLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 253 LTKHFIRTNIEPEWMVLFLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 312
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 313 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDVIEGKEGRFRE 372
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 373 TLLGKRVDYSGRSVI 387
[54][TOP]
>UniRef100_A7M957 DNA-directed RNA polymerase subunit beta' n=1 Tax=Cuscuta reflexa
RepID=RPOC1_CUSRE
Length = 691
Score = 264 bits (674), Expect = 3e-69
Identities = 131/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
L KHFIRTNIEPEWMVL LLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 257 LVKHFIRTNIEPEWMVLSLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 316
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSDIIEGKEGRFRE
Sbjct: 317 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRE 376
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 377 TLLGKRVDYSGRSVI 391
[55][TOP]
>UniRef100_C3UNW3 DNA-directed RNA polymerase n=1 Tax=Megaleranthis saniculifolia
RepID=C3UNW3_9MAGN
Length = 680
Score = 263 bits (672), Expect = 5e-69
Identities = 130/135 (96%), Positives = 133/135 (98%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+EPE MVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNVEPERMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[56][TOP]
>UniRef100_Q3BAQ1 DNA-directed RNA polymerase subunit beta' n=1 Tax=Phalaenopsis
aphrodite subsp. formosana RepID=RPOC1_PHAAO
Length = 679
Score = 263 bits (672), Expect = 5e-69
Identities = 127/135 (94%), Positives = 132/135 (97%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHF+RTN++PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFLRTNVDPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
L TSRSTPGELVMCQEKLVQEAVDTL DNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LATSRSTPGELVMCQEKLVQEAVDTLFDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[57][TOP]
>UniRef100_Q6EW57 DNA-directed RNA polymerase subunit beta' n=1 Tax=Nymphaea alba
RepID=RPOC1_NYMAL
Length = 684
Score = 261 bits (668), Expect = 1e-68
Identities = 128/135 (94%), Positives = 132/135 (97%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHF+RTN+EPEWMVL LLPVLPPELRPIIQIDGGK MSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFLRTNVEPEWMVLSLLPVLPPELRPIIQIDGGKSMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[58][TOP]
>UniRef100_Q4FFY0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Typha latifolia
RepID=Q4FFY0_TYPLA
Length = 684
Score = 261 bits (667), Expect = 2e-68
Identities = 129/135 (95%), Positives = 132/135 (97%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+EPE MVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 254 LAKHFIRTNVEPERMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 313
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
L TSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 314 LATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 373
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 374 TLLGKRVDYSGRSVI 388
[59][TOP]
>UniRef100_Q4FFY4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acorus americanus
RepID=Q4FFY4_ACOAM
Length = 696
Score = 261 bits (666), Expect = 2e-68
Identities = 129/135 (95%), Positives = 132/135 (97%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+EPE MVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 264 LAKHFIRTNVEPERMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 323
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
L TSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 324 LKTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 383
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 384 TLLGKRVDYSGRSVI 398
[60][TOP]
>UniRef100_A9QC66 DNA-directed RNA polymerase (Fragment) n=1 Tax=Trachelium caeruleum
RepID=A9QC66_TRACE
Length = 689
Score = 261 bits (666), Expect = 2e-68
Identities = 126/135 (93%), Positives = 133/135 (98%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPII+IDGGKLMSSDINELYRRVI+RNNTLI+L
Sbjct: 257 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIEIDGGKLMSSDINELYRRVIFRNNTLINL 316
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSR TPGEL+MCQEKLVQEAVDTLLDNG+RGQP +DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 317 LTTSRFTPGELIMCQEKLVQEAVDTLLDNGVRGQPTRDGHNKVYKSFSDVIEGKEGRFRE 376
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 377 TLLGKRVDYSGRSVI 391
[61][TOP]
>UniRef100_Q5QA71 DNA-directed RNA polymerase subunit beta' n=1 Tax=Acorus gramineus
RepID=RPOC1_ACOGR
Length = 682
Score = 261 bits (666), Expect = 2e-68
Identities = 129/135 (95%), Positives = 132/135 (97%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+EPE MVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNVEPERMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
L TSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LKTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[62][TOP]
>UniRef100_A9LYH6 DNA-directed RNA polymerase subunit beta' n=2 Tax=Acorus
RepID=RPOC1_ACOAM
Length = 682
Score = 261 bits (666), Expect = 2e-68
Identities = 129/135 (95%), Positives = 132/135 (97%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+EPE MVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNVEPERMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
L TSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LKTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[63][TOP]
>UniRef100_Q4FFY1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ranunculus
macranthus RepID=Q4FFY1_RANMC
Length = 688
Score = 260 bits (665), Expect = 3e-68
Identities = 128/135 (94%), Positives = 132/135 (97%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+EPE MVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 258 LAKHFIRTNVEPERMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 317
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP +DGHNK+YKSFSD+IEGKEGRFRE
Sbjct: 318 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPTRDGHNKIYKSFSDVIEGKEGRFRE 377
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 378 TLLGKRVDYSGRSVI 392
[64][TOP]
>UniRef100_A1XGM9 DNA-directed RNA polymerase subunit beta' n=1 Tax=Ranunculus
macranthus RepID=RPOC1_RANMC
Length = 680
Score = 260 bits (665), Expect = 3e-68
Identities = 128/135 (94%), Positives = 132/135 (97%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+EPE MVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNVEPERMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP +DGHNK+YKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPTRDGHNKIYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[65][TOP]
>UniRef100_Q49C96 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cuscuta europaea
RepID=Q49C96_CUSEU
Length = 468
Score = 259 bits (662), Expect = 7e-68
Identities = 126/135 (93%), Positives = 132/135 (97%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPV+PPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL +L
Sbjct: 59 LAKHFIRTNIEPEWMVLCLLPVIPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTNL 118
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
L TS+STPGEL++CQE LVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSDIIEGKEGRFRE
Sbjct: 119 LKTSKSTPGELIICQENLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRE 178
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 179 TLLGKRVDYSGRSVI 193
[66][TOP]
>UniRef100_C3KEF8 DNA-directed RNA polymerase n=1 Tax=Ceratophyllum demersum
RepID=C3KEF8_CERDE
Length = 680
Score = 258 bits (660), Expect = 1e-67
Identities = 129/135 (95%), Positives = 131/135 (97%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPE MVLCLLPVLPPELRPIIQIDGGK MSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPERMVLCLLPVLPPELRPIIQIDGGKPMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGE VMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGESVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[67][TOP]
>UniRef100_A6MMJ8 DNA-directed RNA polymerase subunit beta' n=1 Tax=Dioscorea
elephantipes RepID=RPOC1_DIOEL
Length = 685
Score = 258 bits (660), Expect = 1e-67
Identities = 128/135 (94%), Positives = 131/135 (97%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+EP+ MVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 253 LAKHFIRTNVEPKRMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 312
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
L TSRS PGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 313 LATSRSMPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDVIEGKEGRFRE 372
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 373 TLLGKRVDYSGRSVI 387
[68][TOP]
>UniRef100_A8SE82 DNA-directed RNA polymerase subunit beta' n=1 Tax=Ceratophyllum
demersum RepID=RPOC1_CERDE
Length = 680
Score = 258 bits (660), Expect = 1e-67
Identities = 129/135 (95%), Positives = 131/135 (97%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPE MVLCLLPVLPPELRPIIQIDGGK MSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPERMVLCLLPVLPPELRPIIQIDGGKPMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGE VMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGESVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[69][TOP]
>UniRef100_Q09FX0 DNA-directed RNA polymerase subunit beta' n=1 Tax=Nandina domestica
RepID=RPOC1_NANDO
Length = 680
Score = 258 bits (659), Expect = 1e-67
Identities = 128/135 (94%), Positives = 131/135 (97%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+EPE MVLCLLPVLPPELRPIIQIDGGK MSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNVEPERMVLCLLPVLPPELRPIIQIDGGKPMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+D HNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDSHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[70][TOP]
>UniRef100_A6MM27 DNA-directed RNA polymerase subunit beta' n=1 Tax=Buxus microphylla
RepID=RPOC1_BUXMI
Length = 685
Score = 257 bits (657), Expect = 2e-67
Identities = 128/135 (94%), Positives = 131/135 (97%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRT +EPE MVLCLLPVLPPELRPIIQIDGGK MSSDINELYRRVIYRNNTLIDL
Sbjct: 250 LAKHFIRTKVEPERMVLCLLPVLPPELRPIIQIDGGKSMSSDINELYRRVIYRNNTLIDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTP ELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPRELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[71][TOP]
>UniRef100_A6MMT5 DNA-directed RNA polymerase subunit beta' n=1 Tax=Illicium
oligandrum RepID=RPOC1_ILLOL
Length = 689
Score = 256 bits (653), Expect = 7e-67
Identities = 126/135 (93%), Positives = 131/135 (97%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHF+RTN+EPE MVLCLLPVLPPELRPIIQIDGGK MSSDINELYRRVIYRNNTL D
Sbjct: 257 LAKHFLRTNVEPERMVLCLLPVLPPELRPIIQIDGGKPMSSDINELYRRVIYRNNTLTDP 316
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELV+CQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 317 LTTSRSTPGELVLCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 376
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 377 TLLGKRVDYSGRSVI 391
[72][TOP]
>UniRef100_Q7YJX9 DNA-directed RNA polymerase subunit beta' n=1 Tax=Calycanthus
floridus var. glaucus RepID=RPOC1_CALFG
Length = 678
Score = 256 bits (653), Expect = 7e-67
Identities = 127/135 (94%), Positives = 130/135 (96%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+EPE MVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL D
Sbjct: 250 LAKHFIRTNVEPERMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDP 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTS STPGE VMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSTSTPGESVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[73][TOP]
>UniRef100_Q0G9M8 DNA-directed RNA polymerase subunit beta' n=1 Tax=Liriodendron
tulipifera RepID=RPOC1_LIRTU
Length = 681
Score = 255 bits (652), Expect = 9e-67
Identities = 127/135 (94%), Positives = 130/135 (96%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+EPE MVLCLLPVLPPELRPIIQIDGGK MSSDINELYRRVIYRNNTL D
Sbjct: 251 LAKHFIRTNVEPERMVLCLLPVLPPELRPIIQIDGGKPMSSDINELYRRVIYRNNTLTDP 310
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGE VMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 311 LTTSRSTPGESVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 370
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 371 TLLGKRVDYSGRSVI 385
[74][TOP]
>UniRef100_Q06GR9 DNA-directed RNA polymerase subunit beta' n=1 Tax=Piper cenocladum
RepID=RPOC1_PIPCE
Length = 688
Score = 254 bits (649), Expect = 2e-66
Identities = 127/135 (94%), Positives = 131/135 (97%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+EPE MVL LLPVLPPELRPIIQIDGGK MSSDINELYRRVIYRNNTL DL
Sbjct: 250 LAKHFIRTNVEPERMVLSLLPVLPPELRPIIQIDGGKPMSSDINELYRRVIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DG+NKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGYNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[75][TOP]
>UniRef100_P60287 DNA-directed RNA polymerase subunit beta' n=1 Tax=Amborella
trichopoda RepID=RPOC1_AMBTC
Length = 680
Score = 254 bits (649), Expect = 2e-66
Identities = 126/135 (93%), Positives = 130/135 (96%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKH +RTN+EPE MVLCLLPVLPPELRPIIQIDGGK MSSDINELYRRVIYRNNTLID
Sbjct: 250 LAKHLLRTNVEPERMVLCLLPVLPPELRPIIQIDGGKPMSSDINELYRRVIYRNNTLIDP 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGE VMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGESVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[76][TOP]
>UniRef100_Q06H06 DNA-directed RNA polymerase subunit beta' n=1 Tax=Drimys
granadensis RepID=RPOC1_DRIGR
Length = 681
Score = 253 bits (647), Expect = 4e-66
Identities = 126/135 (93%), Positives = 130/135 (96%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+EPE MVLCLLPVLPPELRPIIQIDGGK MSSDINELYRRVIYRNNTL D
Sbjct: 250 LAKHFIRTNVEPERMVLCLLPVLPPELRPIIQIDGGKPMSSDINELYRRVIYRNNTLTDP 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGE VMCQEKLVQEAVDTLLDNGIRGQPM++GHNKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGESVMCQEKLVQEAVDTLLDNGIRGQPMRNGHNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[77][TOP]
>UniRef100_Q2VEI5 DNA-directed RNA polymerase subunit beta' n=1 Tax=Solanum tuberosum
RepID=RPOC1_SOLTU
Length = 687
Score = 253 bits (646), Expect = 5e-66
Identities = 122/135 (90%), Positives = 132/135 (97%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFI++NI+P+WMV CLLPVLPPELRPII+IDGGKLMSSDI+ELYR+VIYRNNTL DL
Sbjct: 256 LAKHFIQSNIDPQWMVWCLLPVLPPELRPIIRIDGGKLMSSDISELYRKVIYRNNTLTDL 315
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
L TS+STPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 316 LRTSKSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRE 375
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 376 TLLGKRVDYSGRSVI 390
[78][TOP]
>UniRef100_A6MMB3 DNA-directed RNA polymerase subunit beta' n=1 Tax=Chloranthus
spicatus RepID=RPOC1_CHLSC
Length = 688
Score = 252 bits (644), Expect = 8e-66
Identities = 126/135 (93%), Positives = 129/135 (95%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAK+ IRTN+EPEWMVL LLPVLPPELRPIIQIDGGK MSSDINELYRRVIYRNNTL D
Sbjct: 254 LAKNLIRTNVEPEWMVLRLLPVLPPELRPIIQIDGGKPMSSDINELYRRVIYRNNTLTDP 313
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGE VMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSD+IEGKEGRFRE
Sbjct: 314 LTTSRSTPGESVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDVIEGKEGRFRE 373
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 374 TLLGKRVDYSGRSVI 388
[79][TOP]
>UniRef100_A9QBS1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Passiflora biflora
RepID=A9QBS1_PASBI
Length = 679
Score = 251 bits (642), Expect = 1e-65
Identities = 121/135 (89%), Positives = 131/135 (97%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNI+PEWMVLCLLPVLPP+LRPIIQIDGGKL+SSDINELYRRVIYRN+TL DL
Sbjct: 250 LAKHFIRTNIQPEWMVLCLLPVLPPDLRPIIQIDGGKLISSDINELYRRVIYRNSTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LT S+S+ G+ VMCQEKLVQEAVDTLLDNGIRGQPM+DGHNK+YKSFSD+IEGKEGRFRE
Sbjct: 310 LTKSQSSSGDFVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKIYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[80][TOP]
>UniRef100_B8R4A7 DNA-directed RNA polymerase n=1 Tax=Trifolium subterraneum
RepID=B8R4A7_TRISU
Length = 682
Score = 251 bits (641), Expect = 2e-65
Identities = 125/135 (92%), Positives = 129/135 (95%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFI +NIEPEWMVLCLLPVLPPELRPIIQIDGGKL+SSDINELYRRVI RNNTLIDL
Sbjct: 250 LAKHFILSNIEPEWMVLCLLPVLPPELRPIIQIDGGKLISSDINELYRRVIGRNNTLIDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LT SR+TP E VMCQEKLVQEAVDTLLDNGIRGQPM+DG NKVYKSFSDIIEGKEGRFRE
Sbjct: 310 LTISRATPAEFVMCQEKLVQEAVDTLLDNGIRGQPMRDGQNKVYKSFSDIIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[81][TOP]
>UniRef100_B0Z4M6 DNA-directed RNA polymerase subunit beta' n=5 Tax=Oenothera
RepID=RPOC1_OENAR
Length = 679
Score = 251 bits (641), Expect = 2e-65
Identities = 124/135 (91%), Positives = 130/135 (96%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQ+DGGKLMSSDINELYRRVIYRNN L DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQMDGGKLMSSDINELYRRVIYRNNILADL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPG+LVM QEKLVQEAVDTLLDNGIR +P++DG NKVYKSFSD+IEGKEGRFRE
Sbjct: 310 LTTSRSTPGDLVMGQEKLVQEAVDTLLDNGIRSRPVRDGQNKVYKSFSDVIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[82][TOP]
>UniRef100_Q49CA5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cuscuta japonica
RepID=Q49CA5_CUSJA
Length = 265
Score = 244 bits (624), Expect = 2e-63
Identities = 120/123 (97%), Positives = 121/123 (98%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
L KHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DL
Sbjct: 143 LVKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDL 202
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM+DGHNKVYKSFSDIIEGKEGRFRE
Sbjct: 203 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRE 262
Query: 364 TLL 372
TLL
Sbjct: 263 TLL 265
[83][TOP]
>UniRef100_A9QBZ3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Scaevola aemula
RepID=A9QBZ3_9ASTR
Length = 680
Score = 229 bits (584), Expect = 7e-59
Identities = 114/135 (84%), Positives = 125/135 (92%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAK+FI+TN+EP+WMVL LLPVLPP+LRPI Q D GKLMSSDINELYRR+I RNNTLIDL
Sbjct: 250 LAKYFIQTNLEPQWMVLRLLPVLPPDLRPIFQTDRGKLMSSDINELYRRIILRNNTLIDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
L S+ TPGELVMCQ+KLVQEAVDTLLDNGI GQPM+D HNKVYKSFSD+I+GKEGRFRE
Sbjct: 310 LA-SKFTPGELVMCQQKLVQEAVDTLLDNGIGGQPMRDRHNKVYKSFSDVIQGKEGRFRE 368
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 369 TLLGKRVDYSGRSVI 383
[84][TOP]
>UniRef100_A9QB28 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cycas micronesica
RepID=A9QB28_9SPER
Length = 687
Score = 227 bits (579), Expect = 3e-58
Identities = 109/136 (80%), Positives = 124/136 (91%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAKHF++T+IEPEWMVLC LPVLPPELRPI+Q+ GG+L++SD NELYRRVIYRNNTL D
Sbjct: 255 KLAKHFLQTDIEPEWMVLCPLPVLPPELRPIVQLGGGELITSDPNELYRRVIYRNNTLTD 314
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
LL SRSTPG LV+CQ+KLVQEAVD LLDNGIRGQPM+D H++ YKSFSD+IEGKEGR R
Sbjct: 315 LLARSRSTPGGLVICQKKLVQEAVDALLDNGIRGQPMRDSHDRPYKSFSDVIEGKEGRSR 374
Query: 361 ETLLGKRVDYSGRSVI 408
E LLGKRVDYSGRSVI
Sbjct: 375 ENLLGKRVDYSGRSVI 390
[85][TOP]
>UniRef100_Q06RE0 DNA-directed RNA polymerase subunit beta' n=1 Tax=Jasminum
nudiflorum RepID=RPOC1_JASNU
Length = 691
Score = 227 bits (579), Expect = 3e-58
Identities = 113/135 (83%), Positives = 121/135 (89%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEPEWMVLCLLPVLPP+LRP+IQI GK+MSSDI +LY+RVIYRN L DL
Sbjct: 250 LAKHFIRTNIEPEWMVLCLLPVLPPDLRPVIQIAEGKVMSSDITKLYQRVIYRNKILTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LT S STPG+LV QEKLVQEAVD LLDNG RGQPM+DG NKVYKS SDIIEGKEGRFR+
Sbjct: 310 LTRSVSTPGDLVTSQEKLVQEAVDALLDNGTRGQPMRDGQNKVYKSLSDIIEGKEGRFRQ 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[86][TOP]
>UniRef100_A6H5F8 DNA-directed RNA polymerase subunit beta' n=1 Tax=Cycas
taitungensis RepID=RPOC1_CYCTA
Length = 681
Score = 227 bits (579), Expect = 3e-58
Identities = 109/136 (80%), Positives = 124/136 (91%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAKHF++T+IEPEWMVLC LPVLPPELRPI+Q+ GG+L++SD NELYRRVIYRNNTL D
Sbjct: 249 KLAKHFLQTDIEPEWMVLCPLPVLPPELRPIVQLGGGELITSDPNELYRRVIYRNNTLTD 308
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
LL SRSTPG LV+CQ+KLVQEAVD LLDNGIRGQPM+D H++ YKSFSD+IEGKEGR R
Sbjct: 309 LLARSRSTPGGLVICQKKLVQEAVDALLDNGIRGQPMRDSHDRPYKSFSDVIEGKEGRSR 368
Query: 361 ETLLGKRVDYSGRSVI 408
E LLGKRVDYSGRSVI
Sbjct: 369 ENLLGKRVDYSGRSVI 384
[87][TOP]
>UniRef100_B2LMI1 DNA-directed RNA polymerase subunit beta' n=1 Tax=Guizotia
abyssinica RepID=RPOC1_GUIAB
Length = 696
Score = 225 bits (574), Expect = 1e-57
Identities = 109/135 (80%), Positives = 122/135 (90%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEP+WMVLCLLPVLPPELRPI ID KL++SDINE+YRR+IYRNNTL DL
Sbjct: 257 LAKHFIRTNIEPKWMVLCLLPVLPPELRPIYHIDEDKLVTSDINEIYRRIIYRNNTLTDL 316
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTS +TP EL++ QEKL+QEAVD LLDNGI GQPM+D HN++YKS SD+IEGKEGR RE
Sbjct: 317 LTTSIATPEELIISQEKLLQEAVDALLDNGICGQPMRDDHNRIYKSLSDVIEGKEGRVRE 376
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 377 TLLGKRVDYSGRSVI 391
[88][TOP]
>UniRef100_P06273 DNA-directed RNA polymerase subunit beta' n=1 Tax=Marchantia
polymorpha RepID=RPOC1_MARPO
Length = 684
Score = 225 bits (573), Expect = 1e-57
Identities = 107/136 (78%), Positives = 124/136 (91%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAKHFI+TNI+PEWMVL LLPVLPPELRP+I++ G+L++SD+NELYRRVIYRNNTL+D
Sbjct: 249 KLAKHFIQTNIKPEWMVLSLLPVLPPELRPMIELGEGELITSDLNELYRRVIYRNNTLLD 308
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L S STPG LV+CQ++LVQEAVD L+DNGIRGQPMKD HN+ YKSFSD+IEGKEGRFR
Sbjct: 309 FLARSGSTPGGLVVCQKRLVQEAVDALIDNGIRGQPMKDSHNRPYKSFSDLIEGKEGRFR 368
Query: 361 ETLLGKRVDYSGRSVI 408
E LLGKRVDYSGRSVI
Sbjct: 369 ENLLGKRVDYSGRSVI 384
[89][TOP]
>UniRef100_B8Y2W5 DNA-directed RNA polymerase n=1 Tax=Festuca arundinacea
RepID=B8Y2W5_FESAR
Length = 674
Score = 222 bits (566), Expect = 9e-57
Identities = 108/136 (79%), Positives = 120/136 (88%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAKHFI+TN+EPEWMVLCLLPVLPPELRPI+ G K+++SDINELY+RVI RNN L
Sbjct: 249 QLAKHFIQTNVEPEWMVLCLLPVLPPELRPIVYRSGDKVVTSDINELYKRVIRRNNNLAY 308
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
LL S P +LVMCQEKLVQEAVDTLLD+G RGQPM+DGHNKVYKS SD+IEGKEGRFR
Sbjct: 309 LLKRSELAPADLVMCQEKLVQEAVDTLLDSGSRGQPMRDGHNKVYKSLSDVIEGKEGRFR 368
Query: 361 ETLLGKRVDYSGRSVI 408
ETLLGKRVDYSGRSVI
Sbjct: 369 ETLLGKRVDYSGRSVI 384
[90][TOP]
>UniRef100_A1E9R5 DNA-directed RNA polymerase subunit beta' n=1 Tax=Sorghum bicolor
RepID=RPOC1_SORBI
Length = 683
Score = 222 bits (566), Expect = 9e-57
Identities = 108/136 (79%), Positives = 120/136 (88%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAKHFI+TN+EPEWMVLCLLPVLPPELRPI+ G K+++SDINELY+RVI RNN L
Sbjct: 249 QLAKHFIQTNVEPEWMVLCLLPVLPPELRPIVYRSGDKVVTSDINELYKRVIRRNNNLAY 308
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
LL S P +LVMCQEKLVQEAVDTLLD+G RGQPM+DGHNKVYKS SD+IEGKEGRFR
Sbjct: 309 LLKRSELAPADLVMCQEKLVQEAVDTLLDSGSRGQPMRDGHNKVYKSLSDVIEGKEGRFR 368
Query: 361 ETLLGKRVDYSGRSVI 408
ETLLGKRVDYSGRSVI
Sbjct: 369 ETLLGKRVDYSGRSVI 384
[91][TOP]
>UniRef100_Q6L3A6 DNA-directed RNA polymerase subunit beta' n=2 Tax=Saccharum
RepID=RPOC1_SACHY
Length = 683
Score = 222 bits (566), Expect = 9e-57
Identities = 108/136 (79%), Positives = 120/136 (88%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAKHFI+TN+EPEWMVLCLLPVLPPELRPI+ G K+++SDINELY+RVI RNN L
Sbjct: 249 QLAKHFIQTNVEPEWMVLCLLPVLPPELRPIVYRSGDKVVTSDINELYKRVIRRNNNLAY 308
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
LL S P +LVMCQEKLVQEAVDTLLD+G RGQPM+DGHNKVYKS SD+IEGKEGRFR
Sbjct: 309 LLKRSELAPADLVMCQEKLVQEAVDTLLDSGSRGQPMRDGHNKVYKSLSDVIEGKEGRFR 368
Query: 361 ETLLGKRVDYSGRSVI 408
ETLLGKRVDYSGRSVI
Sbjct: 369 ETLLGKRVDYSGRSVI 384
[92][TOP]
>UniRef100_A8Y9G1 DNA-directed RNA polymerase subunit beta' n=1 Tax=Lolium perenne
RepID=RPOC1_LOLPR
Length = 676
Score = 222 bits (566), Expect = 9e-57
Identities = 108/136 (79%), Positives = 120/136 (88%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAKHFI+TN+EPEWMVLCLLPVLPPELRPI+ G K+++SDINELY+RVI RNN L
Sbjct: 249 QLAKHFIQTNVEPEWMVLCLLPVLPPELRPIVYRSGDKVVTSDINELYKRVIRRNNNLAY 308
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
LL S P +LVMCQEKLVQEAVDTLLD+G RGQPM+DGHNKVYKS SD+IEGKEGRFR
Sbjct: 309 LLKRSELAPADLVMCQEKLVQEAVDTLLDSGSRGQPMRDGHNKVYKSLSDVIEGKEGRFR 368
Query: 361 ETLLGKRVDYSGRSVI 408
ETLLGKRVDYSGRSVI
Sbjct: 369 ETLLGKRVDYSGRSVI 384
[93][TOP]
>UniRef100_Q56P12 DNA-directed RNA polymerase subunit beta' n=1 Tax=Lactuca sativa
RepID=RPOC1_LACSA
Length = 689
Score = 221 bits (563), Expect = 2e-56
Identities = 109/135 (80%), Positives = 121/135 (89%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEP+WMVL LLPVLPPELRPI ID KL++SDINE+YRR+IYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPKWMVLRLLPVLPPELRPIYHIDEDKLVTSDINEIYRRIIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTS +TP EL++ QEKL+QEAVD LLDNGI GQPM+D HN+VYKS SD+IEGKEGR RE
Sbjct: 310 LTTSIATPEELIISQEKLLQEAVDALLDNGICGQPMRDDHNRVYKSLSDVIEGKEGRVRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[94][TOP]
>UniRef100_Q1KXX1 DNA-directed RNA polymerase subunit beta' n=1 Tax=Helianthus annuus
RepID=RPOC1_HELAN
Length = 689
Score = 221 bits (562), Expect = 3e-56
Identities = 108/135 (80%), Positives = 121/135 (89%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTNIEP+WMVL LLPVLPPELRPI ID KL++SDINE+YRR+IYRNNTL DL
Sbjct: 250 LAKHFIRTNIEPKWMVLRLLPVLPPELRPIYHIDEDKLVTSDINEIYRRIIYRNNTLTDL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LTTS +TP EL++ QEKL+QEAVD LLDNGI GQPM+D HN++YKS SD+IEGKEGR RE
Sbjct: 310 LTTSIATPEELIISQEKLLQEAVDALLDNGICGQPMRDDHNRIYKSLSDVIEGKEGRVRE 369
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 370 TLLGKRVDYSGRSVI 384
[95][TOP]
>UniRef100_A1E9Z9 DNA-directed RNA polymerase subunit beta' n=1 Tax=Agrostis
stolonifera RepID=RPOC1_AGRST
Length = 682
Score = 221 bits (562), Expect = 3e-56
Identities = 107/136 (78%), Positives = 120/136 (88%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAKHFI+TN+EPEWMVLCLLPVLPPELRPI+ G K+++SDINELY+RVI RNN L
Sbjct: 249 QLAKHFIQTNVEPEWMVLCLLPVLPPELRPIVYRSGDKVVTSDINELYKRVIRRNNNLAY 308
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
LL S P +LVMCQEKLVQEAVDTLLD+G RGQP++DGHNKVYKS SD+IEGKEGRFR
Sbjct: 309 LLKRSELAPADLVMCQEKLVQEAVDTLLDSGSRGQPIRDGHNKVYKSLSDVIEGKEGRFR 368
Query: 361 ETLLGKRVDYSGRSVI 408
ETLLGKRVDYSGRSVI
Sbjct: 369 ETLLGKRVDYSGRSVI 384
[96][TOP]
>UniRef100_Q85CL6 DNA-directed RNA polymerase subunit beta' n=1 Tax=Anthoceros
formosae RepID=RPOC1_ANTFO
Length = 681
Score = 220 bits (561), Expect = 3e-56
Identities = 103/135 (76%), Positives = 123/135 (91%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAK+F++TN++PEWMVL LLPVLPPELRP+I++ G+L++SD+NELYRRVIYRNNTL+D
Sbjct: 250 LAKNFLQTNMKPEWMVLSLLPVLPPELRPMIELGEGELITSDLNELYRRVIYRNNTLLDF 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
L RSTPG LV+CQ++LVQEAVD L+DNGIRGQPM+D HN+ YKSFSD+IEGKEGRFRE
Sbjct: 310 LARGRSTPGGLVVCQKRLVQEAVDALIDNGIRGQPMRDSHNRAYKSFSDLIEGKEGRFRE 369
Query: 364 TLLGKRVDYSGRSVI 408
LLGKRVDYSGRSVI
Sbjct: 370 NLLGKRVDYSGRSVI 384
[97][TOP]
>UniRef100_Q6Z1U9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q6Z1U9_ORYSJ
Length = 682
Score = 220 bits (560), Expect = 4e-56
Identities = 107/136 (78%), Positives = 119/136 (87%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAKHFI+TN+EPEWMVLCLLPVLPPELRPI+ G K+++SDINELY+RVI RNN L
Sbjct: 249 QLAKHFIQTNVEPEWMVLCLLPVLPPELRPIVYRSGDKVVTSDINELYKRVIRRNNNLAY 308
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
LL S P +LVMCQEKLVQEAVDTLLD+G RGQP +DGHNKVYKS SD+IEGKEGRFR
Sbjct: 309 LLKRSELAPADLVMCQEKLVQEAVDTLLDSGSRGQPTRDGHNKVYKSLSDVIEGKEGRFR 368
Query: 361 ETLLGKRVDYSGRSVI 408
ETLLGKRVDYSGRSVI
Sbjct: 369 ETLLGKRVDYSGRSVI 384
[98][TOP]
>UniRef100_C8XU08 RNA polymerase beta n=1 Tax=Coix lacryma-jobi RepID=C8XU08_COILA
Length = 683
Score = 220 bits (560), Expect = 4e-56
Identities = 107/136 (78%), Positives = 119/136 (87%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAKHFI+TN+EPEWMVLCLLPVLPPELRPI+ G K+++SDINELY+RVI RNN L
Sbjct: 249 QLAKHFIQTNVEPEWMVLCLLPVLPPELRPIVYRSGDKVVTSDINELYKRVIRRNNNLAY 308
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
LL S P +LVMCQEKLVQEAVDTLLD+G RGQP +DGHNKVYKS SD+IEGKEGRFR
Sbjct: 309 LLKRSELAPADLVMCQEKLVQEAVDTLLDSGSRGQPTRDGHNKVYKSLSDVIEGKEGRFR 368
Query: 361 ETLLGKRVDYSGRSVI 408
ETLLGKRVDYSGRSVI
Sbjct: 369 ETLLGKRVDYSGRSVI 384
[99][TOP]
>UniRef100_C6GJ47 DNA-directed RNA polymerase n=2 Tax=Bambuseae RepID=C6GJ47_BAMOL
Length = 682
Score = 220 bits (560), Expect = 4e-56
Identities = 107/136 (78%), Positives = 119/136 (87%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAKHFI+TN+EPEWMVLCLLPVLPPELRPI+ G K+++SDINELY+RVI RNN L
Sbjct: 249 QLAKHFIQTNVEPEWMVLCLLPVLPPELRPIVYRSGDKVVTSDINELYKRVIRRNNNLAY 308
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
LL S P +LVMCQEKLVQEAVDTLLD+G RGQP +DGHNKVYKS SD+IEGKEGRFR
Sbjct: 309 LLKRSELAPADLVMCQEKLVQEAVDTLLDSGSRGQPTRDGHNKVYKSLSDVIEGKEGRFR 368
Query: 361 ETLLGKRVDYSGRSVI 408
ETLLGKRVDYSGRSVI
Sbjct: 369 ETLLGKRVDYSGRSVI 384
[100][TOP]
>UniRef100_B2ZEA0 DNA-directed RNA polymerase n=1 Tax=Phyllostachys propinqua
RepID=B2ZEA0_9POAL
Length = 682
Score = 220 bits (560), Expect = 4e-56
Identities = 107/136 (78%), Positives = 119/136 (87%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAKHFI+TN+EPEWMVLCLLPVLPPELRPI+ G K+++SDINELY+RVI RNN L
Sbjct: 249 QLAKHFIQTNVEPEWMVLCLLPVLPPELRPIVYRSGDKVVTSDINELYKRVIRRNNNLAY 308
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
LL S P +LVMCQEKLVQEAVDTLLD+G RGQP +DGHNKVYKS SD+IEGKEGRFR
Sbjct: 309 LLKRSELAPADLVMCQEKLVQEAVDTLLDSGSRGQPTRDGHNKVYKSLSDVIEGKEGRFR 368
Query: 361 ETLLGKRVDYSGRSVI 408
ETLLGKRVDYSGRSVI
Sbjct: 369 ETLLGKRVDYSGRSVI 384
[101][TOP]
>UniRef100_Q9XPS8 DNA-directed RNA polymerase subunit beta' n=1 Tax=Triticum aestivum
RepID=RPOC1_WHEAT
Length = 683
Score = 220 bits (560), Expect = 4e-56
Identities = 107/136 (78%), Positives = 119/136 (87%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAKHFI+TN+EPEWMVLCLLPVLPPELRPI+ G K+++SDINELY+RVI RNN L
Sbjct: 249 QLAKHFIQTNVEPEWMVLCLLPVLPPELRPIVYRSGDKVVTSDINELYKRVIRRNNNLAY 308
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
LL S P +LVMCQEKLVQEAVDTLLD+G RGQP +DGHNKVYKS SD+IEGKEGRFR
Sbjct: 309 LLKRSELAPADLVMCQEKLVQEAVDTLLDSGSRGQPTRDGHNKVYKSLSDVIEGKEGRFR 368
Query: 361 ETLLGKRVDYSGRSVI 408
ETLLGKRVDYSGRSVI
Sbjct: 369 ETLLGKRVDYSGRSVI 384
[102][TOP]
>UniRef100_P60288 DNA-directed RNA polymerase subunit beta' n=1 Tax=Physcomitrella
patens RepID=RPOC1_PHYPA
Length = 679
Score = 220 bits (560), Expect = 4e-56
Identities = 106/136 (77%), Positives = 122/136 (89%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAK F++TNI+PEWMVL LLPVLPPELRP+I++ G+L++SD+NELYRRVIYRNNTLID
Sbjct: 246 KLAKQFLQTNIKPEWMVLSLLPVLPPELRPMIELGEGELITSDLNELYRRVIYRNNTLID 305
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L S STPG LV+CQ +LVQEAVD L+DNGIRGQPMKD HN+ YKSFSD+IEGKEGRFR
Sbjct: 306 FLARSGSTPGGLVVCQIRLVQEAVDGLIDNGIRGQPMKDSHNRPYKSFSDVIEGKEGRFR 365
Query: 361 ETLLGKRVDYSGRSVI 408
E LLGKRVDYSGRSVI
Sbjct: 366 ENLLGKRVDYSGRSVI 381
[103][TOP]
>UniRef100_P0C506 DNA-directed RNA polymerase subunit beta' n=4 Tax=Oryza
RepID=RPOC1_ORYSJ
Length = 682
Score = 220 bits (560), Expect = 4e-56
Identities = 107/136 (78%), Positives = 119/136 (87%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAKHFI+TN+EPEWMVLCLLPVLPPELRPI+ G K+++SDINELY+RVI RNN L
Sbjct: 249 QLAKHFIQTNVEPEWMVLCLLPVLPPELRPIVYRSGDKVVTSDINELYKRVIRRNNNLAY 308
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
LL S P +LVMCQEKLVQEAVDTLLD+G RGQP +DGHNKVYKS SD+IEGKEGRFR
Sbjct: 309 LLKRSELAPADLVMCQEKLVQEAVDTLLDSGSRGQPTRDGHNKVYKSLSDVIEGKEGRFR 368
Query: 361 ETLLGKRVDYSGRSVI 408
ETLLGKRVDYSGRSVI
Sbjct: 369 ETLLGKRVDYSGRSVI 384
[104][TOP]
>UniRef100_P16024 DNA-directed RNA polymerase subunit beta' n=1 Tax=Zea mays
RepID=RPOC1_MAIZE
Length = 683
Score = 220 bits (560), Expect = 4e-56
Identities = 107/136 (78%), Positives = 119/136 (87%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAKHFI+TN+EPEWMVLCLLPVLPPELRPI+ G K+++SDINELY+RVI RNN L
Sbjct: 249 QLAKHFIQTNVEPEWMVLCLLPVLPPELRPIVYRSGDKVVTSDINELYKRVIRRNNNLAY 308
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
LL S P +LVMCQEKLVQEAVDTLLD+G RGQP +DGHNKVYKS SD+IEGKEGRFR
Sbjct: 309 LLKRSELAPADLVMCQEKLVQEAVDTLLDSGSRGQPTRDGHNKVYKSLSDVIEGKEGRFR 368
Query: 361 ETLLGKRVDYSGRSVI 408
ETLLGKRVDYSGRSVI
Sbjct: 369 ETLLGKRVDYSGRSVI 384
[105][TOP]
>UniRef100_A1E9I2 DNA-directed RNA polymerase subunit beta' n=1 Tax=Hordeum vulgare
RepID=RPOC1_HORVU
Length = 682
Score = 220 bits (560), Expect = 4e-56
Identities = 107/136 (78%), Positives = 119/136 (87%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAKHFI+TN+EPEWMVLCLLPVLPPELRPI+ G K+++SDINELY+RVI RNN L
Sbjct: 249 QLAKHFIQTNVEPEWMVLCLLPVLPPELRPIVYRSGDKVVTSDINELYKRVIRRNNNLAY 308
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
LL S P +LVMCQEKLVQEAVDTLLD+G RGQP +DGHNKVYKS SD+IEGKEGRFR
Sbjct: 309 LLKRSELAPADLVMCQEKLVQEAVDTLLDSGSRGQPTRDGHNKVYKSLSDVIEGKEGRFR 368
Query: 361 ETLLGKRVDYSGRSVI 408
ETLLGKRVDYSGRSVI
Sbjct: 369 ETLLGKRVDYSGRSVI 384
[106][TOP]
>UniRef100_B3TN43 DNA-directed RNA polymerase subunit beta' n=1 Tax=Brachypodium
distachyon RepID=RPOC1_BRADI
Length = 682
Score = 220 bits (560), Expect = 4e-56
Identities = 107/136 (78%), Positives = 119/136 (87%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAKHFI+TN+EPEWMVLCLLPVLPPELRPI+ G K+++SDINELY+RVI RNN L
Sbjct: 249 QLAKHFIQTNVEPEWMVLCLLPVLPPELRPIVYRSGDKVVTSDINELYKRVIRRNNNLAY 308
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
LL S P +LVMCQEKLVQEAVDTLLD+G RGQP +DGHNKVYKS SD+IEGKEGRFR
Sbjct: 309 LLKRSELAPADLVMCQEKLVQEAVDTLLDSGSRGQPTRDGHNKVYKSLSDVIEGKEGRFR 368
Query: 361 ETLLGKRVDYSGRSVI 408
ETLLGKRVDYSGRSVI
Sbjct: 369 ETLLGKRVDYSGRSVI 384
[107][TOP]
>UniRef100_Q8S1Q5 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q8S1Q5_ORYSJ
Length = 682
Score = 219 bits (559), Expect = 6e-56
Identities = 106/136 (77%), Positives = 119/136 (87%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAKHFI+TN+EPEWMVLCLLPVLPPELRPI+ G K+++SDINELY+RVI RNN L
Sbjct: 249 QLAKHFIQTNVEPEWMVLCLLPVLPPELRPIVYRSGDKVVTSDINELYKRVIRRNNNLAY 308
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
LL S P +LVMCQEKLVQEAVDTLLD+G RGQP +DGHNKVYKS SD+IEGKEGRFR
Sbjct: 309 LLKRSELAPADLVMCQEKLVQEAVDTLLDSGSRGQPTRDGHNKVYKSLSDVIEGKEGRFR 368
Query: 361 ETLLGKRVDYSGRSVI 408
ETLLGKRVDYSGRS+I
Sbjct: 369 ETLLGKRVDYSGRSII 384
[108][TOP]
>UniRef100_B9VH98 DNA-directed RNA polymerase n=1 Tax=Syntrichia ruralis
RepID=B9VH98_TORRU
Length = 679
Score = 219 bits (558), Expect = 7e-56
Identities = 105/136 (77%), Positives = 121/136 (88%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAK F++TNI+PEWMVL LLPVLPPELRP+I++ G+L++SD+NELYRRVIYRNNTLID
Sbjct: 246 KLAKQFLQTNIKPEWMVLSLLPVLPPELRPMIELGEGELITSDLNELYRRVIYRNNTLID 305
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
S STPG LV+CQ +LVQEAVD L+DNGIRGQPMKD HN+ YKSFSD+IEGKEGRFR
Sbjct: 306 FSARSGSTPGGLVVCQTRLVQEAVDALIDNGIRGQPMKDSHNRPYKSFSDVIEGKEGRFR 365
Query: 361 ETLLGKRVDYSGRSVI 408
E LLGKRVDYSGRSVI
Sbjct: 366 ENLLGKRVDYSGRSVI 381
[109][TOP]
>UniRef100_B7T381 DNA-directed RNA polymerase n=1 Tax=Geranium carolinianum
RepID=B7T381_9ROSI
Length = 495
Score = 219 bits (558), Expect = 7e-56
Identities = 108/135 (80%), Positives = 122/135 (90%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+EPEWMVLCLLPVLPP LRP +QI K M SDIN+LY RV+ RNN L+DL
Sbjct: 248 LAKHFIRTNVEPEWMVLCLLPVLPPGLRPAVQIGELKRMGSDINDLYGRVLSRNNDLLDL 307
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LT +STPG++VM QE+LVQEAVDTLLDNGIRG+P++DGHNKVYKSF+D+IEGKEGRFRE
Sbjct: 308 LTI-QSTPGDVVMSQERLVQEAVDTLLDNGIRGEPIRDGHNKVYKSFTDLIEGKEGRFRE 366
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 367 TLLGKRVDYSGRSVI 381
[110][TOP]
>UniRef100_C9DTW1 RNA polymerase beta subunit (Fragment) n=1 Tax=Andira inermis
RepID=C9DTW1_9FABA
Length = 245
Score = 218 bits (555), Expect = 2e-55
Identities = 109/110 (99%), Positives = 110/110 (100%)
Frame = +1
Query: 79 ELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDT 258
ELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDT
Sbjct: 1 ELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDT 60
Query: 259 LLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
LLDNGIRGQPM+DGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 61 LLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 110
[111][TOP]
>UniRef100_C9DTV4 RNA polymerase beta subunit (Fragment) n=1 Tax=Byrsonima
crassifolia RepID=C9DTV4_BYRCR
Length = 249
Score = 216 bits (551), Expect = 5e-55
Identities = 106/111 (95%), Positives = 110/111 (99%)
Frame = +1
Query: 76 PELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVD 255
PELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DLLTTS+STPGELVMCQEKLVQEAVD
Sbjct: 1 PELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSKSTPGELVMCQEKLVQEAVD 60
Query: 256 TLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
TLLDNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRET+LGKRVDYSGRSVI
Sbjct: 61 TLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETMLGKRVDYSGRSVI 111
[112][TOP]
>UniRef100_C9DTU9 RNA polymerase beta subunit (Fragment) n=1 Tax=Cecropia obtusifolia
RepID=C9DTU9_9ROSA
Length = 249
Score = 216 bits (550), Expect = 6e-55
Identities = 107/110 (97%), Positives = 109/110 (99%)
Frame = +1
Query: 79 ELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDT 258
ELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDT
Sbjct: 1 ELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDT 60
Query: 259 LLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
L DNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 61 LFDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 110
[113][TOP]
>UniRef100_Q8WI25 DNA-directed RNA polymerase subunit beta' n=1 Tax=Psilotum nudum
RepID=RPOC1_PSINU
Length = 674
Score = 216 bits (549), Expect = 8e-55
Identities = 101/136 (74%), Positives = 120/136 (88%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
RL KHF+ T+++PEWMVL LLPVLPPELRP+I++ GG L++SD+NELYR+VIYRNNTLID
Sbjct: 254 RLVKHFLYTDVKPEWMVLSLLPVLPPELRPMIEVSGGLLLTSDLNELYRKVIYRNNTLID 313
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L S TP L++CQ++LVQEAVD L+DNGIRGQP++D HN+ YKSFSDIIEGKEGRFR
Sbjct: 314 FLLRSEFTPEGLIVCQKRLVQEAVDALIDNGIRGQPIRDSHNRPYKSFSDIIEGKEGRFR 373
Query: 361 ETLLGKRVDYSGRSVI 408
E LLGKRVDYSGRSVI
Sbjct: 374 ENLLGKRVDYSGRSVI 389
[114][TOP]
>UniRef100_Q4FFY3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba
RepID=Q4FFY3_GINBI
Length = 684
Score = 214 bits (546), Expect = 2e-54
Identities = 104/135 (77%), Positives = 119/135 (88%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFI+TNIEPEWMVLCLLPVLPPE RPI+Q+ G+L++SD+NELYR+VI+RNNTL +L
Sbjct: 253 LAKHFIQTNIEPEWMVLCLLPVLPPEPRPIVQLSEGELITSDLNELYRKVIHRNNTLTNL 312
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
S S PG LV+CQ+KLVQEAVD LLDNGIRGQPMKD ++ YKSFSD+IEGKEGR RE
Sbjct: 313 SARSGSAPGGLVICQKKLVQEAVDALLDNGIRGQPMKDSRDRPYKSFSDVIEGKEGRSRE 372
Query: 364 TLLGKRVDYSGRSVI 408
LLGKRVDYSGRSVI
Sbjct: 373 NLLGKRVDYSGRSVI 387
[115][TOP]
>UniRef100_B0YPL9 DNA-directed RNA polymerase subunit beta' n=1 Tax=Aneura mirabilis
RepID=RPOC1_ANEMR
Length = 699
Score = 214 bits (546), Expect = 2e-54
Identities = 100/136 (73%), Positives = 122/136 (89%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+L+K+F++TNIEPEWMVL LLPVLPPELRP+I++ G+L++SD+NELYRRVIYRNNTL+D
Sbjct: 249 KLSKYFVQTNIEPEWMVLSLLPVLPPELRPMIELGEGELITSDLNELYRRVIYRNNTLLD 308
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L S STP L++CQ++LVQEAVD L+DNGIRGQPM+D HN+ YKSFSD++ GKEGRFR
Sbjct: 309 FLARSDSTPRGLIICQKRLVQEAVDALIDNGIRGQPMRDNHNRPYKSFSDLLGGKEGRFR 368
Query: 361 ETLLGKRVDYSGRSVI 408
E LLGKRVDYSGRSVI
Sbjct: 369 ENLLGKRVDYSGRSVI 384
[116][TOP]
>UniRef100_B7T3M3 DNA-directed RNA polymerase n=1 Tax=Geranium palmatum
RepID=B7T3M3_9ROSI
Length = 683
Score = 214 bits (545), Expect = 2e-54
Identities = 107/135 (79%), Positives = 122/135 (90%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHFIRTN+EPEWMVLCLLPVLPPELRP +QI KLM SDIN+LY RV+ RNN L+ L
Sbjct: 250 LAKHFIRTNVEPEWMVLCLLPVLPPELRPGVQIAELKLMGSDINKLYGRVLSRNNDLLHL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LT +STP ++VM QE+LVQEAVDTLLDNGIRGQP++DG+NKVYKSF+D+I+GKEGRFRE
Sbjct: 310 LTI-QSTPEDVVMSQERLVQEAVDTLLDNGIRGQPIRDGNNKVYKSFTDVIQGKEGRFRE 368
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 369 TLLGKRVDYSGRSVI 383
[117][TOP]
>UniRef100_C9DTV7 RNA polymerase beta subunit (Fragment) n=1 Tax=Symplocos serrulata
RepID=C9DTV7_9ERIC
Length = 249
Score = 213 bits (543), Expect = 4e-54
Identities = 106/110 (96%), Positives = 109/110 (99%)
Frame = +1
Query: 79 ELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDT 258
ELRPIIQIDGGKLMSSDINELYRRVIYRNNTL DLLTTSRSTPGELVMCQEKLVQEAVDT
Sbjct: 1 ELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDT 60
Query: 259 LLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
LLDNGIRGQPM+DG+NKVYKSFSD+IEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 61 LLDNGIRGQPMRDGYNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 110
[118][TOP]
>UniRef100_C9DTW8 RNA polymerase beta subunit (Fragment) n=1 Tax=Mollinedia
pinchotiana RepID=C9DTW8_9MAGN
Length = 254
Score = 212 bits (540), Expect = 9e-54
Identities = 105/108 (97%), Positives = 107/108 (99%)
Frame = +1
Query: 85 RPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLL 264
RPIIQIDGGKLMSSDINELYRRVIYRNNTL DLLTTSRSTPGELVMCQEKLVQEAVDTLL
Sbjct: 1 RPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLL 60
Query: 265 DNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
DNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 61 DNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 108
[119][TOP]
>UniRef100_C9DTW4 RNA polymerase beta subunit (Fragment) n=1 Tax=Petiveria alliacea
RepID=C9DTW4_9CARY
Length = 247
Score = 212 bits (540), Expect = 9e-54
Identities = 105/108 (97%), Positives = 107/108 (99%)
Frame = +1
Query: 85 RPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLL 264
RPIIQIDGGKLMSSDINELYRRVIYRNNTL DLLTTSRSTPGELVMCQEKLVQEAVDTLL
Sbjct: 1 RPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLL 60
Query: 265 DNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
DNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 61 DNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 108
[120][TOP]
>UniRef100_C9DTW3 RNA polymerase beta subunit (Fragment) n=1 Tax=Sideroxylon capiri
RepID=C9DTW3_9ERIC
Length = 247
Score = 212 bits (540), Expect = 9e-54
Identities = 105/108 (97%), Positives = 107/108 (99%)
Frame = +1
Query: 85 RPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLL 264
RPIIQIDGGKLMSSDINELYRRVIYRNNTL DLLTTSRSTPGELVMCQEKLVQEAVDTLL
Sbjct: 1 RPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLL 60
Query: 265 DNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
DNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 61 DNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 108
[121][TOP]
>UniRef100_C9DTV6 RNA polymerase beta subunit (Fragment) n=1 Tax=Hydrangea
macrophylla RepID=C9DTV6_HYDMC
Length = 247
Score = 212 bits (540), Expect = 9e-54
Identities = 105/108 (97%), Positives = 107/108 (99%)
Frame = +1
Query: 85 RPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLL 264
RPIIQIDGGKLMSSDINELYRRVIYRNNTL DLLTTSRSTPGELVMCQEKLVQEAVDTLL
Sbjct: 1 RPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLL 60
Query: 265 DNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
DNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 61 DNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 108
[122][TOP]
>UniRef100_C9DTV5 RNA polymerase beta subunit (Fragment) n=1 Tax=Dieffenbachia sp.
KRJ-2009 RepID=C9DTV5_9ARAE
Length = 247
Score = 212 bits (540), Expect = 9e-54
Identities = 105/108 (97%), Positives = 107/108 (99%)
Frame = +1
Query: 85 RPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLL 264
RPIIQIDGGKLMSSDINELYRRVIYRNNTL DLLTTSRSTPGELVMCQEKLVQEAVDTLL
Sbjct: 1 RPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLL 60
Query: 265 DNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
DNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 61 DNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 108
[123][TOP]
>UniRef100_C9DTW5 RNA polymerase beta subunit (Fragment) n=1 Tax=Ranunculus
peruvianus RepID=C9DTW5_9MAGN
Length = 248
Score = 212 bits (539), Expect = 1e-53
Identities = 104/108 (96%), Positives = 107/108 (99%)
Frame = +1
Query: 85 RPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLL 264
RPIIQIDGGKLMSSDINELYRRVIYRNNTL DLLTTSRSTPGELVMCQEKLVQEAVDTLL
Sbjct: 1 RPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLL 60
Query: 265 DNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
DNGIRGQPM+DGHNK+YKSFSD+IEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 61 DNGIRGQPMRDGHNKIYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 108
[124][TOP]
>UniRef100_C9DTW2 RNA polymerase beta subunit (Fragment) n=1 Tax=Thouinidium
decandrum RepID=C9DTW2_9ROSI
Length = 247
Score = 211 bits (536), Expect = 3e-53
Identities = 104/108 (96%), Positives = 107/108 (99%)
Frame = +1
Query: 85 RPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLL 264
RPIIQI+GGKLMSSDINELYRRVIYRNNTL DLLTTSRSTPGELVMCQEKLVQEAVDTLL
Sbjct: 1 RPIIQIEGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLL 60
Query: 265 DNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
DNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 61 DNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 108
[125][TOP]
>UniRef100_C9DTV9 RNA polymerase beta subunit (Fragment) n=1 Tax=Alternanthera
ficoidea RepID=C9DTV9_9CARY
Length = 247
Score = 211 bits (536), Expect = 3e-53
Identities = 104/108 (96%), Positives = 107/108 (99%)
Frame = +1
Query: 85 RPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLL 264
RPIIQIDGGKLMSSDINELYRRVIYRNNTL DLL+TSRSTPGELVMCQEKLVQEAVDTLL
Sbjct: 1 RPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLSTSRSTPGELVMCQEKLVQEAVDTLL 60
Query: 265 DNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
DNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 61 DNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 108
[126][TOP]
>UniRef100_C9DTV2 RNA polymerase beta subunit (Fragment) n=1 Tax=Carludovica drudei
RepID=C9DTV2_9LILI
Length = 243
Score = 210 bits (535), Expect = 3e-53
Identities = 104/108 (96%), Positives = 106/108 (98%)
Frame = +1
Query: 85 RPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLL 264
RPIIQIDGGKLMSSDINELYRRVIYRNNTL DLL TSRSTPGELVMCQEKLVQEAVDTLL
Sbjct: 1 RPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLL 60
Query: 265 DNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
DNGIRGQPM+DGHNKVYKSFSD+IEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 61 DNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 108
[127][TOP]
>UniRef100_C9DTW0 RNA polymerase beta subunit (Fragment) n=1 Tax=Halenia rhyacophila
RepID=C9DTW0_9GENT
Length = 247
Score = 207 bits (528), Expect = 2e-52
Identities = 103/108 (95%), Positives = 105/108 (97%)
Frame = +1
Query: 85 RPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLL 264
RPIIQIDGGKLMSSDINELYRRVIYRNNTL DLLTTSRSTP EL+MCQEKLVQEAVDTLL
Sbjct: 1 RPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPAELLMCQEKLVQEAVDTLL 60
Query: 265 DNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
DNGIRGQPMKD HNKVYKSFSD+IEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 61 DNGIRGQPMKDSHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 108
[128][TOP]
>UniRef100_C3W0R3 DNA-directed RNA polymerase n=1 Tax=Cedrus deodara
RepID=C3W0R3_CEDDE
Length = 696
Score = 206 bits (524), Expect = 7e-52
Identities = 103/137 (75%), Positives = 119/137 (86%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LL +RS V+CQ+KL+QEAVD LLDNGI GQPMKD H++ YKSFSD+IEGKEGRF
Sbjct: 325 NLL--ARSGSESFVICQKKLIQEAVDALLDNGICGQPMKDSHDRPYKSFSDVIEGKEGRF 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[129][TOP]
>UniRef100_C3VZN7 DNA-directed RNA polymerase n=1 Tax=Pinus aristata
RepID=C3VZN7_9CONI
Length = 696
Score = 206 bits (524), Expect = 7e-52
Identities = 103/137 (75%), Positives = 119/137 (86%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LL SRS V+CQ+KL+QEAVD LLDNGI GQPM+D H++ YKSFSD+IEGKEGRF
Sbjct: 325 NLL--SRSGSESFVICQKKLIQEAVDALLDNGICGQPMRDSHDRPYKSFSDVIEGKEGRF 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[130][TOP]
>UniRef100_C3W073 DNA-directed RNA polymerase n=2 Tax=Strobus RepID=C3W073_9CONI
Length = 696
Score = 205 bits (521), Expect = 1e-51
Identities = 102/137 (74%), Positives = 119/137 (86%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LL +RS V+CQ+KL+QEAVD LLDNGI GQPM+D H++ YKSFSD+IEGKEGRF
Sbjct: 325 NLL--ARSGSESFVICQKKLIQEAVDALLDNGICGQPMRDSHDRPYKSFSDVIEGKEGRF 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[131][TOP]
>UniRef100_C3VZB6 DNA-directed RNA polymerase n=1 Tax=Abies firma RepID=C3VZB6_ABIFI
Length = 696
Score = 205 bits (521), Expect = 1e-51
Identities = 102/137 (74%), Positives = 119/137 (86%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LL +RS V+CQ+KL+QEAVD LLDNGI GQPM+D H++ YKSFSD+IEGKEGRF
Sbjct: 325 NLL--ARSGSESFVICQKKLIQEAVDALLDNGICGQPMRDSHDRPYKSFSDVIEGKEGRF 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[132][TOP]
>UniRef100_C3VXW8 DNA-directed RNA polymerase n=1 Tax=Pinus rzedowskii
RepID=C3VXW8_PINRZ
Length = 696
Score = 205 bits (521), Expect = 1e-51
Identities = 102/137 (74%), Positives = 119/137 (86%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LL +RS V+CQ+KL+QEAVD LLDNGI GQPM+D H++ YKSFSD+IEGKEGRF
Sbjct: 325 NLL--ARSGSESFVICQKKLIQEAVDALLDNGICGQPMRDSHDRPYKSFSDVIEGKEGRF 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[133][TOP]
>UniRef100_C3TS83 DNA-directed RNA polymerase n=1 Tax=Pinus krempfii
RepID=C3TS83_PINKR
Length = 696
Score = 205 bits (521), Expect = 1e-51
Identities = 102/137 (74%), Positives = 119/137 (86%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LL +RS V+CQ+KL+QEAVD LLDNGI GQPM+D H++ YKSFSD+IEGKEGRF
Sbjct: 325 NLL--ARSGSESFVICQKKLIQEAVDALLDNGICGQPMRDSHDRPYKSFSDVIEGKEGRF 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[134][TOP]
>UniRef100_C1IXS8 DNA-directed RNA polymerase n=2 Tax=Strobus RepID=C1IXS8_PINGE
Length = 696
Score = 205 bits (521), Expect = 1e-51
Identities = 102/137 (74%), Positives = 119/137 (86%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LL +RS V+CQ+KL+QEAVD LLDNGI GQPM+D H++ YKSFSD+IEGKEGRF
Sbjct: 325 NLL--ARSGSESFVICQKKLIQEAVDALLDNGICGQPMRDSHDRPYKSFSDVIEGKEGRF 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[135][TOP]
>UniRef100_A4QM10 DNA-directed RNA polymerase n=1 Tax=Pinus koraiensis
RepID=A4QM10_PINKO
Length = 480
Score = 205 bits (521), Expect = 1e-51
Identities = 102/137 (74%), Positives = 119/137 (86%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 49 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 108
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LL +RS V+CQ+KL+QEAVD LLDNGI GQPM+D H++ YKSFSD+IEGKEGRF
Sbjct: 109 NLL--ARSGSESFVICQKKLIQEAVDALLDNGICGQPMRDSHDRPYKSFSDVIEGKEGRF 166
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 167 RENLLGKRVDYSGRSVI 183
[136][TOP]
>UniRef100_Q85WS8 DNA-directed RNA polymerase subunit beta' n=10 Tax=Strobus
RepID=RPOC1_PINKO
Length = 696
Score = 205 bits (521), Expect = 1e-51
Identities = 102/137 (74%), Positives = 119/137 (86%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LL +RS V+CQ+KL+QEAVD LLDNGI GQPM+D H++ YKSFSD+IEGKEGRF
Sbjct: 325 NLL--ARSGSESFVICQKKLIQEAVDALLDNGICGQPMRDSHDRPYKSFSDVIEGKEGRF 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[137][TOP]
>UniRef100_A2T323 DNA-directed RNA polymerase subunit beta' n=1 Tax=Angiopteris
evecta RepID=RPOC1_ANGEV
Length = 687
Score = 205 bits (521), Expect = 1e-51
Identities = 94/136 (69%), Positives = 119/136 (87%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+L+KHF+ TNI+PEWMVL +LPVLPPELRP+I++ G +++SD NELYR++IYRNN L+D
Sbjct: 253 KLSKHFLHTNIKPEWMVLDVLPVLPPELRPMIELSEGDVITSDFNELYRKIIYRNNILLD 312
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
LL S TP L++CQ+KL+QEAVD L+DNGIRGQP++D +N+ YKSFS++IEGKEGRFR
Sbjct: 313 LLLKSAFTPEGLIICQKKLIQEAVDALIDNGIRGQPLRDSNNRPYKSFSEVIEGKEGRFR 372
Query: 361 ETLLGKRVDYSGRSVI 408
E LLGKRVDYSGRSVI
Sbjct: 373 ENLLGKRVDYSGRSVI 388
[138][TOP]
>UniRef100_B7ZIN7 DNA-directed RNA polymerase n=1 Tax=Keteleeria davidiana
RepID=B7ZIN7_KETDA
Length = 696
Score = 204 bits (520), Expect = 2e-51
Identities = 101/137 (73%), Positives = 119/137 (86%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LL +RS ++CQ+KL+QEAVD LLDNGI GQPM+D H++ YKSFSD+IEGKEGRF
Sbjct: 325 NLL--ARSGSESFIICQKKLIQEAVDALLDNGICGQPMRDSHDRPYKSFSDVIEGKEGRF 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[139][TOP]
>UniRef100_B7T3F2 DNA-directed RNA polymerase n=1 Tax=Geranium macrorrhizum
RepID=B7T3F2_9ROSI
Length = 683
Score = 204 bits (520), Expect = 2e-51
Identities = 104/135 (77%), Positives = 118/135 (87%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAK FIRTN+EPEWMVL LLPVLPPELRP +QI KLM SDIN+LY RV+ RNN L+ L
Sbjct: 250 LAKDFIRTNVEPEWMVLSLLPVLPPELRPGVQIAEPKLMGSDINKLYGRVLLRNNDLLHL 309
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
LT +STP ++VM QE+LVQEAVD LLDNGIRGQP+ DG+NKVYKSF+D+I+GKEGRFRE
Sbjct: 310 LTI-QSTPEDVVMSQERLVQEAVDILLDNGIRGQPITDGNNKVYKSFTDVIQGKEGRFRE 368
Query: 364 TLLGKRVDYSGRSVI 408
TLLGKRVDYSGRSVI
Sbjct: 369 TLLGKRVDYSGRSVI 383
[140][TOP]
>UniRef100_B5KYB5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tortella bambergeri
RepID=B5KYB5_9BRYO
Length = 254
Score = 204 bits (520), Expect = 2e-51
Identities = 98/126 (77%), Positives = 112/126 (88%)
Frame = +1
Query: 31 IEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPG 210
++PEWMVL LLPVLPPELRP+I++ G+L++SD+NELYRRVIYRNNTLID S STPG
Sbjct: 1 MKPEWMVLSLLPVLPPELRPMIELGEGELITSDLNELYRRVIYRNNTLIDFSARSGSTPG 60
Query: 211 ELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDY 390
LV+CQ +LVQEAVD L+DNGIRGQPMKD HN+ YKSFSD+IEGKEGRFRE LLGKRVDY
Sbjct: 61 GLVVCQTRLVQEAVDALIDNGIRGQPMKDSHNRPYKSFSDVIEGKEGRFRENLLGKRVDY 120
Query: 391 SGRSVI 408
SGRSVI
Sbjct: 121 SGRSVI 126
[141][TOP]
>UniRef100_B5KYB0 DNA-directed RNA polymerase (Fragment) n=4 Tax=Pottiaceae
RepID=B5KYB0_9BRYO
Length = 252
Score = 204 bits (518), Expect = 3e-51
Identities = 98/124 (79%), Positives = 110/124 (88%)
Frame = +1
Query: 37 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGEL 216
PEWMVL LLPVLPPELRP+I++ G+L++SD+NELYRRVIYRNNTLID S STPG L
Sbjct: 1 PEWMVLSLLPVLPPELRPMIELGEGELITSDLNELYRRVIYRNNTLIDFSARSGSTPGGL 60
Query: 217 VMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSG 396
V+CQ +LVQEAVD L+DNGIRGQPMKD HN+ YKSFSD+IEGKEGRFRE LLGKRVDYSG
Sbjct: 61 VVCQTRLVQEAVDALIDNGIRGQPMKDSHNRPYKSFSDVIEGKEGRFRENLLGKRVDYSG 120
Query: 397 RSVI 408
RSVI
Sbjct: 121 RSVI 124
[142][TOP]
>UniRef100_C9DTV0 RNA polymerase beta subunit (Fragment) n=1 Tax=Senna reticulata
RepID=C9DTV0_9FABA
Length = 238
Score = 203 bits (517), Expect = 4e-51
Identities = 100/103 (97%), Positives = 103/103 (100%)
Frame = +1
Query: 100 IDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIR 279
IDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIR
Sbjct: 1 IDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIR 60
Query: 280 GQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
GQPM+DGHNKVYKSF+D+IEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 61 GQPMRDGHNKVYKSFADVIEGKEGRFRETLLGKRVDYSGRSVI 103
[143][TOP]
>UniRef100_C7SM28 RNA polymerase beta (Fragment) n=1 Tax=Joinvillea plicata
RepID=C7SM28_9POAL
Length = 419
Score = 202 bits (513), Expect = 1e-50
Identities = 100/122 (81%), Positives = 107/122 (87%)
Frame = +1
Query: 43 WMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVM 222
WMVLCLLPVLPPELRPI+ G KL++SDINELY+RVI RN L LL SR TP ELVM
Sbjct: 1 WMVLCLLPVLPPELRPIVYRSGDKLVTSDINELYKRVISRNKNLTYLLKKSRFTPAELVM 60
Query: 223 CQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRS 402
CQEKLVQEAVDTLLD+G RGQP +DGHNKVYKSFSD+IEGKEGRFRETLLGKRVDYSGRS
Sbjct: 61 CQEKLVQEAVDTLLDSGARGQPTRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRS 120
Query: 403 VI 408
VI
Sbjct: 121 VI 122
[144][TOP]
>UniRef100_C3W2I0 DNA-directed RNA polymerase n=1 Tax=Pinus pinaster
RepID=C3W2I0_PINPS
Length = 696
Score = 202 bits (513), Expect = 1e-50
Identities = 102/137 (74%), Positives = 117/137 (85%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LL +RS V+ Q KL+QEAVD LLDNGI GQPM+D HN+ YKSFSD+IEGKEGRF
Sbjct: 325 NLL--ARSGSESFVIYQTKLIQEAVDALLDNGICGQPMRDSHNRPYKSFSDVIEGKEGRF 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[145][TOP]
>UniRef100_C3W1T3 DNA-directed RNA polymerase n=1 Tax=Pinus merkusii
RepID=C3W1T3_9CONI
Length = 696
Score = 202 bits (513), Expect = 1e-50
Identities = 102/137 (74%), Positives = 117/137 (85%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LL +RS V+ Q KL+QEAVD LLDNGI GQPM+D HN+ YKSFSD+IEGKEGRF
Sbjct: 325 NLL--ARSGSESFVIYQTKLIQEAVDALLDNGICGQPMRDSHNRPYKSFSDVIEGKEGRF 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[146][TOP]
>UniRef100_C3W0J9 DNA-directed RNA polymerase n=1 Tax=Pinus canariensis
RepID=C3W0J9_9CONI
Length = 696
Score = 202 bits (513), Expect = 1e-50
Identities = 102/137 (74%), Positives = 117/137 (85%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LL +RS V+ Q KL+QEAVD LLDNGI GQPM+D HN+ YKSFSD+IEGKEGRF
Sbjct: 325 NLL--ARSGSESFVIYQTKLIQEAVDALLDNGICGQPMRDSHNRPYKSFSDVIEGKEGRF 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[147][TOP]
>UniRef100_C3VXU6 DNA-directed RNA polymerase n=1 Tax=Pinus resinosa
RepID=C3VXU6_PINRE
Length = 696
Score = 202 bits (513), Expect = 1e-50
Identities = 102/137 (74%), Positives = 117/137 (85%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LL +RS V+ Q KL+QEAVD LLDNGI GQPM+D HN+ YKSFSD+IEGKEGRF
Sbjct: 325 NLL--ARSGSESFVIYQTKLIQEAVDALLDNGICGQPMRDSHNRPYKSFSDVIEGKEGRF 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[148][TOP]
>UniRef100_C1IXE8 DNA-directed RNA polymerase n=1 Tax=Picea sitchensis
RepID=C1IXE8_PICSI
Length = 696
Score = 202 bits (513), Expect = 1e-50
Identities = 101/137 (73%), Positives = 118/137 (86%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LL +RS V+CQ+KL+QEAVD LLDNGI GQPM+D H++ YKSFSD+IEGKEGR
Sbjct: 325 NLL--ARSGSESFVICQKKLIQEAVDALLDNGICGQPMRDSHDRPYKSFSDVIEGKEGRS 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[149][TOP]
>UniRef100_B5KYD0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tortella humilis
RepID=B5KYD0_9BRYO
Length = 252
Score = 201 bits (511), Expect = 2e-50
Identities = 97/123 (78%), Positives = 109/123 (88%)
Frame = +1
Query: 40 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELV 219
EWMVL LLPVLPPELRP+I++ G+L++SD+NELYRRVIYRNNTLID S STPG LV
Sbjct: 1 EWMVLSLLPVLPPELRPMIELGEGELITSDLNELYRRVIYRNNTLIDFSARSGSTPGGLV 60
Query: 220 MCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGR 399
+CQ +LVQEAVD L+DNGIRGQPMKD HN+ YKSFSD+IEGKEGRFRE LLGKRVDYSGR
Sbjct: 61 VCQTRLVQEAVDALIDNGIRGQPMKDSHNRPYKSFSDVIEGKEGRFRENLLGKRVDYSGR 120
Query: 400 SVI 408
SVI
Sbjct: 121 SVI 123
[150][TOP]
>UniRef100_B5KYC7 DNA-directed RNA polymerase (Fragment) n=8 Tax=Tortella
RepID=B5KYC7_9BRYO
Length = 252
Score = 201 bits (511), Expect = 2e-50
Identities = 97/123 (78%), Positives = 109/123 (88%)
Frame = +1
Query: 40 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELV 219
EWMVL LLPVLPPELRP+I++ G+L++SD+NELYRRVIYRNNTLID S STPG LV
Sbjct: 1 EWMVLSLLPVLPPELRPMIELGEGELITSDLNELYRRVIYRNNTLIDFSARSGSTPGGLV 60
Query: 220 MCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGR 399
+CQ +LVQEAVD L+DNGIRGQPMKD HN+ YKSFSD+IEGKEGRFRE LLGKRVDYSGR
Sbjct: 61 VCQTRLVQEAVDALIDNGIRGQPMKDSHNRPYKSFSDVIEGKEGRFRENLLGKRVDYSGR 120
Query: 400 SVI 408
SVI
Sbjct: 121 SVI 123
[151][TOP]
>UniRef100_B5KYA8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pleurochaete
squarrosa RepID=B5KYA8_9BRYO
Length = 252
Score = 201 bits (511), Expect = 2e-50
Identities = 97/123 (78%), Positives = 109/123 (88%)
Frame = +1
Query: 40 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELV 219
EWMVL LLPVLPPELRP+I++ G+L++SD+NELYRRVIYRNNTLID S STPG LV
Sbjct: 2 EWMVLSLLPVLPPELRPMIELGEGELITSDLNELYRRVIYRNNTLIDFSARSGSTPGGLV 61
Query: 220 MCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGR 399
+CQ +LVQEAVD L+DNGIRGQPMKD HN+ YKSFSD+IEGKEGRFRE LLGKRVDYSGR
Sbjct: 62 VCQTRLVQEAVDALIDNGIRGQPMKDSHNRPYKSFSDVIEGKEGRFRENLLGKRVDYSGR 121
Query: 400 SVI 408
SVI
Sbjct: 122 SVI 124
[152][TOP]
>UniRef100_C9DTX0 RNA polymerase beta subunit (Fragment) n=1 Tax=Centropogon valeri
RepID=C9DTX0_9ASTR
Length = 250
Score = 201 bits (510), Expect = 3e-50
Identities = 98/106 (92%), Positives = 103/106 (97%)
Frame = +1
Query: 91 IIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLDN 270
IIQIDGGKLMSSDINELYRRVIYRNNTL+DLLTTSR TP ELVMCQEKLVQEAVDTLLDN
Sbjct: 1 IIQIDGGKLMSSDINELYRRVIYRNNTLLDLLTTSRFTPAELVMCQEKLVQEAVDTLLDN 60
Query: 271 GIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
G+RGQP +DGHNKVYKSFSD+IEGKEGRFRET+LGKRVDYSGRSVI
Sbjct: 61 GVRGQPTRDGHNKVYKSFSDVIEGKEGRFRETMLGKRVDYSGRSVI 106
[153][TOP]
>UniRef100_Q85FM8 DNA-directed RNA polymerase subunit beta' n=1 Tax=Adiantum
capillus-veneris RepID=RPOC1_ADICA
Length = 694
Score = 201 bits (510), Expect = 3e-50
Identities = 93/136 (68%), Positives = 119/136 (87%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAK F+RTN++PEWMVL +PVLPPELRPI+++ G+L++SD+NELYR++IYRNNTL +
Sbjct: 249 KLAKDFLRTNMKPEWMVLYFIPVLPPELRPIVELHEGELITSDLNELYRKIIYRNNTLRE 308
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L+ S TP L++CQ++LVQEAVD L+ +GIRGQPM+D HN+ YKSFS++IEGKEGRFR
Sbjct: 309 FLSGSEFTPEGLIVCQKRLVQEAVDALIGSGIRGQPMRDIHNRPYKSFSEVIEGKEGRFR 368
Query: 361 ETLLGKRVDYSGRSVI 408
E LLGKRVDYSGRSVI
Sbjct: 369 ENLLGKRVDYSGRSVI 384
[154][TOP]
>UniRef100_UPI0000191AF8 RNA polymerase beta'''' subunit n=1 Tax=Adiantum capillus-veneris
RepID=UPI0000191AF8
Length = 698
Score = 200 bits (508), Expect = 5e-50
Identities = 93/136 (68%), Positives = 119/136 (87%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAK F+RTN++PEWMVL +PVLPPELRPI+++ G+L++SD+NELYR++IYRNNTL +
Sbjct: 253 KLAKDFLRTNMKPEWMVLYFIPVLPPELRPIVELYEGELITSDLNELYRKIIYRNNTLRE 312
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L+ S TP L++CQ++LVQEAVD L+ +GIRGQPM+D HN+ YKSFS++IEGKEGRFR
Sbjct: 313 FLSGSEFTPEGLIVCQKRLVQEAVDALIGSGIRGQPMRDIHNRPYKSFSEVIEGKEGRFR 372
Query: 361 ETLLGKRVDYSGRSVI 408
E LLGKRVDYSGRSVI
Sbjct: 373 ENLLGKRVDYSGRSVI 388
[155][TOP]
>UniRef100_C3W1R9 DNA-directed RNA polymerase n=1 Tax=Larix occidentalis
RepID=C3W1R9_LAROX
Length = 696
Score = 200 bits (508), Expect = 5e-50
Identities = 100/137 (72%), Positives = 117/137 (85%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNN L
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNALT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LL +RS V+CQ+KL+QEAVD LLDNGI GQPM+D H++ YKSFSD+IEGKEGR
Sbjct: 325 NLL--ARSGSESFVICQKKLIQEAVDALLDNGICGQPMRDSHDRPYKSFSDVIEGKEGRS 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[156][TOP]
>UniRef100_C9DTW9 RNA polymerase beta subunit (Fragment) n=1 Tax=Piper umbellatum
RepID=C9DTW9_9MAGN
Length = 241
Score = 199 bits (507), Expect = 6e-50
Identities = 99/104 (95%), Positives = 102/104 (98%)
Frame = +1
Query: 97 QIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGI 276
QIDGGK MSSDINELYRRVIYRNNTL DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGI
Sbjct: 1 QIDGGKPMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGI 60
Query: 277 RGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
RGQPM+DG+NKVYKSFSD+IEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 61 RGQPMRDGYNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 104
[157][TOP]
>UniRef100_C5HY45 DNA-directed RNA polymerase n=1 Tax=Alsophila spinulosa
RepID=C5HY45_9FILI
Length = 687
Score = 199 bits (506), Expect = 8e-50
Identities = 93/136 (68%), Positives = 120/136 (88%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAK F++TN++PEWMVL LLPVLPPELRPI+++ G+L++SD+NELYR++I+RNNTLI+
Sbjct: 253 KLAKDFLQTNLKPEWMVLNLLPVLPPELRPIVELYEGELITSDLNELYRKIIHRNNTLIE 312
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L+ S TP L++CQ++L+QEAVD +DNGIRGQPMKD +N+ YKSFS++IEGKEGRFR
Sbjct: 313 FLSGSEFTPEGLIVCQKRLIQEAVDAPIDNGIRGQPMKDINNRPYKSFSEVIEGKEGRFR 372
Query: 361 ETLLGKRVDYSGRSVI 408
E LLGKRVDY GRSVI
Sbjct: 373 ENLLGKRVDYLGRSVI 388
[158][TOP]
>UniRef100_C3W124 DNA-directed RNA polymerase n=1 Tax=Pinus leiophylla var.
chihuahuana RepID=C3W124_PINLE
Length = 696
Score = 199 bits (506), Expect = 8e-50
Identities = 102/137 (74%), Positives = 116/137 (84%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LLT S S V+ Q KLVQEAVD LLDNGI QP++D HN+ YKSFSD+IEGKEGRF
Sbjct: 325 NLLTRSGSE--SFVIYQTKLVQEAVDALLDNGICRQPIRDSHNRPYKSFSDVIEGKEGRF 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[159][TOP]
>UniRef100_C3VXL1 DNA-directed RNA polymerase n=3 Tax=Pinus RepID=C3VXL1_PINPO
Length = 696
Score = 199 bits (506), Expect = 8e-50
Identities = 102/137 (74%), Positives = 116/137 (84%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LLT S S V+ Q KLVQEAVD LLDNGI QP++D HN+ YKSFSD+IEGKEGRF
Sbjct: 325 NLLTRSGSE--SFVIYQTKLVQEAVDALLDNGICRQPIRDSHNRPYKSFSDVIEGKEGRF 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[160][TOP]
>UniRef100_C1IXL0 DNA-directed RNA polymerase n=2 Tax=Pinus RepID=C1IXL0_PINCO
Length = 696
Score = 199 bits (506), Expect = 8e-50
Identities = 102/137 (74%), Positives = 116/137 (84%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LLT S S V+ Q KLVQEAVD LLDNGI QP++D HN+ YKSFSD+IEGKEGRF
Sbjct: 325 NLLTRSGSE--SFVIYQTKLVQEAVDALLDNGICRQPIRDSHNRPYKSFSDVIEGKEGRF 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[161][TOP]
>UniRef100_B5KYC6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tortella tortuosa
RepID=B5KYC6_9BRYO
Length = 251
Score = 199 bits (506), Expect = 8e-50
Identities = 96/122 (78%), Positives = 108/122 (88%)
Frame = +1
Query: 43 WMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVM 222
WMVL LLPVLPPELRP+I++ G+L++SD+NELYRRVIYRNNTLID S STPG LV+
Sbjct: 1 WMVLSLLPVLPPELRPMIELGEGELITSDLNELYRRVIYRNNTLIDFSARSGSTPGGLVV 60
Query: 223 CQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRS 402
CQ +LVQEAVD L+DNGIRGQPMKD HN+ YKSFSD+IEGKEGRFRE LLGKRVDYSGRS
Sbjct: 61 CQTRLVQEAVDALIDNGIRGQPMKDSHNRPYKSFSDVIEGKEGRFRENLLGKRVDYSGRS 120
Query: 403 VI 408
VI
Sbjct: 121 VI 122
[162][TOP]
>UniRef100_C9DTW7 RNA polymerase beta subunit (Fragment) n=1 Tax=Ocotea fulvescens
RepID=C9DTW7_9MAGN
Length = 241
Score = 199 bits (505), Expect = 1e-49
Identities = 98/102 (96%), Positives = 100/102 (98%)
Frame = +1
Query: 103 DGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRG 282
DGGKLMSSDINELYRRVIYRNNTL D LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRG
Sbjct: 1 DGGKLMSSDINELYRRVIYRNNTLTDSLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRG 60
Query: 283 QPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
QPM+DGHNKVYKSFSD+IEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 61 QPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 102
[163][TOP]
>UniRef100_C9DTV3 RNA polymerase beta subunit (Fragment) n=1 Tax=Plumeria rubra
RepID=C9DTV3_9GENT
Length = 240
Score = 199 bits (505), Expect = 1e-49
Identities = 98/101 (97%), Positives = 100/101 (99%)
Frame = +1
Query: 106 GGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQ 285
GGKLMSSDINELYRRVIYRNNTL DLLTTSRSTPGEL+MCQEKLVQEAVDTLLDNGIRGQ
Sbjct: 1 GGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELLMCQEKLVQEAVDTLLDNGIRGQ 60
Query: 286 PMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
PMKDGHNKVYKSFSD+IEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 61 PMKDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 101
[164][TOP]
>UniRef100_C3VYS9 DNA-directed RNA polymerase n=1 Tax=Pinus thunbergii
RepID=C3VYS9_PINTH
Length = 696
Score = 199 bits (505), Expect = 1e-49
Identities = 101/137 (73%), Positives = 116/137 (84%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LL +RS V+ Q KL+QEAVD LLDNGI QPM+D HN+ YKSFSD+IEGKEGRF
Sbjct: 325 NLL--ARSGSESFVIYQTKLIQEAVDALLDNGICRQPMRDSHNRPYKSFSDVIEGKEGRF 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[165][TOP]
>UniRef100_P52733 DNA-directed RNA polymerase subunit beta' n=1 Tax=Pinus thunbergii
RepID=RPOC1_PINTH
Length = 696
Score = 199 bits (505), Expect = 1e-49
Identities = 101/137 (73%), Positives = 116/137 (84%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LL +RS V+ Q KL+QEAVD LLDNGI QPM+D HN+ YKSFSD+IEGKEGRF
Sbjct: 325 NLL--ARSGSESFVIYQTKLIQEAVDALLDNGICRQPMRDSHNRPYKSFSDVIEGKEGRF 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[166][TOP]
>UniRef100_C9DTV1 RNA polymerase beta subunit (Fragment) n=1 Tax=Symphonia
globulifera RepID=C9DTV1_9ROSI
Length = 238
Score = 198 bits (503), Expect = 2e-49
Identities = 98/103 (95%), Positives = 102/103 (99%)
Frame = +1
Query: 100 IDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIR 279
IDGGKLMSSDINELYRRVIYRNNTL DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIR
Sbjct: 1 IDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIR 60
Query: 280 GQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
GQPM+DG+NKVYKSFS+IIEGKEGRFRET+LGKRVDYSGRSVI
Sbjct: 61 GQPMRDGYNKVYKSFSNIIEGKEGRFRETMLGKRVDYSGRSVI 103
[167][TOP]
>UniRef100_C3W014 DNA-directed RNA polymerase n=1 Tax=Pinus attenuata
RepID=C3W014_PINAT
Length = 696
Score = 197 bits (502), Expect = 2e-49
Identities = 101/137 (73%), Positives = 116/137 (84%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LLT S S V+ Q KLVQEAVD LLDNGI +P++D HN+ YKSFSD+IEGKEGRF
Sbjct: 325 NLLTRSGSE--SFVIYQTKLVQEAVDALLDNGICRRPIRDSHNRPYKSFSDVIEGKEGRF 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[168][TOP]
>UniRef100_C3VYL0 DNA-directed RNA polymerase n=1 Tax=Pinus taeda RepID=C3VYL0_PINTA
Length = 696
Score = 197 bits (502), Expect = 2e-49
Identities = 101/137 (73%), Positives = 116/137 (84%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQI-DGGKLMSSDINELYRRVIYRNNTLI 177
+LAKHF+RTNIEP+WMVLCLLPVLPPE RPI+Q+ +GG + SSD+NELYRRVI RNNTL
Sbjct: 265 KLAKHFLRTNIEPKWMVLCLLPVLPPEPRPIVQLGEGGLITSSDLNELYRRVINRNNTLT 324
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+LLT S S V+ Q KLVQEAVD LLDNGI +P++D HN+ YKSFSD+IEGKEGRF
Sbjct: 325 NLLTKSGSE--SFVIYQTKLVQEAVDALLDNGICRRPIRDSHNRPYKSFSDVIEGKEGRF 382
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 383 RENLLGKRVDYSGRSVI 399
[169][TOP]
>UniRef100_C9DTU6 RNA polymerase beta subunit (Fragment) n=1 Tax=Calathea lutea
RepID=C9DTU6_9LILI
Length = 240
Score = 197 bits (500), Expect = 4e-49
Identities = 97/101 (96%), Positives = 99/101 (98%)
Frame = +1
Query: 106 GGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQ 285
GGKLMSSDINELYRRVIYRNNTL DLL TSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQ
Sbjct: 1 GGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQ 60
Query: 286 PMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
PM+DGHNKVYKSFSD+IEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 61 PMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 101
[170][TOP]
>UniRef100_C9DTV8 RNA polymerase beta subunit (Fragment) n=1 Tax=Xylopia bocatorena
RepID=C9DTV8_9MAGN
Length = 247
Score = 195 bits (496), Expect = 1e-48
Identities = 98/108 (90%), Positives = 101/108 (93%)
Frame = +1
Query: 85 RPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLL 264
RPIIQIDGGK SSDINELYRRVIYRNNTL D LT S STPGE VMCQEKLVQEAVDTLL
Sbjct: 1 RPIIQIDGGKPASSDINELYRRVIYRNNTLTDPLTISISTPGESVMCQEKLVQEAVDTLL 60
Query: 265 DNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
DNGIRGQPM+DGHN+VYKSFSD+IEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 61 DNGIRGQPMRDGHNQVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 108
[171][TOP]
>UniRef100_B7T311 DNA-directed RNA polymerase n=1 Tax=Erodium texanum
RepID=B7T311_EROTE
Length = 679
Score = 195 bits (495), Expect = 2e-48
Identities = 96/137 (70%), Positives = 115/137 (83%), Gaps = 2/137 (1%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDG--GKLMSSDINELYRRVIYRNNTLI 177
LAKHFI+TN++PEWMVLCLLPVLPP LRP + +D K M SDIN+LY RV+ RNN L+
Sbjct: 247 LAKHFIQTNVKPEWMVLCLLPVLPPGLRPALHLDEFQSKPMGSDINQLYLRVLSRNNALL 306
Query: 178 DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
LT + +++M Q+KL+QEAVDTLLDNG+RGQP++DGHNKVYKSFSD+IEGKEGRF
Sbjct: 307 AFLTIQPRSE-DVIMSQQKLLQEAVDTLLDNGVRGQPIRDGHNKVYKSFSDVIEGKEGRF 365
Query: 358 RETLLGKRVDYSGRSVI 408
R+ LLGKRVDYSGRSVI
Sbjct: 366 RKNLLGKRVDYSGRSVI 382
[172][TOP]
>UniRef100_C9DTU8 RNA polymerase beta subunit (Fragment) n=1 Tax=Lantana camara
RepID=C9DTU8_LANCA
Length = 238
Score = 194 bits (493), Expect = 3e-48
Identities = 96/99 (96%), Positives = 98/99 (98%)
Frame = +1
Query: 112 KLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM 291
KLMSSDINELYRRVIYRNNTL DLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM
Sbjct: 1 KLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPM 60
Query: 292 KDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
+DGHNKVYKSFSD+IEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 61 RDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 99
[173][TOP]
>UniRef100_B7T415 DNA-directed RNA polymerase n=1 Tax=Monsonia vanderietiae
RepID=B7T415_9ROSI
Length = 698
Score = 193 bits (490), Expect = 6e-48
Identities = 97/149 (65%), Positives = 116/149 (77%), Gaps = 14/149 (9%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKH I+TN+EPEWMVLCLLPVLPPELRP+ +D K+M++DIN LYRRVI RNN L+ L
Sbjct: 250 LAKHLIQTNVEPEWMVLCLLPVLPPELRPMFWLDEDKVMATDINILYRRVISRNNALLKL 309
Query: 184 LTTSR--------------STPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKS 321
L T R +++ EK+VQEAVD LLDNGIRGQP++DG+N+VYKS
Sbjct: 310 LRTRRRRRRINRINKSSREQEDVDVLRSHEKMVQEAVDILLDNGIRGQPLRDGNNRVYKS 369
Query: 322 FSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
F+D+I+GKEGRFRETLLGKRVDYSGRSVI
Sbjct: 370 FTDVIQGKEGRFRETLLGKRVDYSGRSVI 398
[174][TOP]
>UniRef100_Q8MA11 DNA-directed RNA polymerase subunit beta' n=1 Tax=Chaetosphaeridium
globosum RepID=RPOC1_CHAGL
Length = 661
Score = 192 bits (489), Expect = 7e-48
Identities = 95/136 (69%), Positives = 114/136 (83%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+LAK F NI+PEWMVL +LPVLPPELRP+I+I+ G+L++SD+NELYRRVIYRNNTLI
Sbjct: 249 KLAKQFFENNIKPEWMVLSVLPVLPPELRPMIEINQGELITSDLNELYRRVIYRNNTLIG 308
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L S STP L++ Q++LVQEAVD L+DN I Q MKD +N+ YKSFS+IIEGKEGRFR
Sbjct: 309 FLNKSNSTPAGLIIYQKRLVQEAVDALIDNRIGNQIMKDRNNRPYKSFSEIIEGKEGRFR 368
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 369 QDLLGKRVDYSGRSVI 384
[175][TOP]
>UniRef100_B7T3U4 DNA-directed RNA polymerase n=1 Tax=Monsonia speciosa
RepID=B7T3U4_9ROSI
Length = 696
Score = 191 bits (485), Expect = 2e-47
Identities = 98/148 (66%), Positives = 118/148 (79%), Gaps = 14/148 (9%)
Frame = +1
Query: 7 AKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLL 186
AKH I+TN+EPEWMVLCLLPVLPPELRP++ +D K+M++DIN LYR+VI RNN L+ LL
Sbjct: 251 AKHLIQTNVEPEWMVLCLLPVLPPELRPMLWLDEDKVMATDINILYRQVISRNNALLKLL 310
Query: 187 T-------------TSRSTPGELVM-CQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSF 324
+SR E V+ E++VQEAVDTLLDNGIRGQP++DG+N+VYKSF
Sbjct: 311 RKRRRRRRIFRINKSSREREDEDVLRSHEEMVQEAVDTLLDNGIRGQPLRDGNNRVYKSF 370
Query: 325 SDIIEGKEGRFRETLLGKRVDYSGRSVI 408
+D+IEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 371 TDVIEGKEGRFRETLLGKRVDYSGRSVI 398
[176][TOP]
>UniRef100_C9DTW6 RNA polymerase beta subunit (Fragment) n=1 Tax=Plantago australis
RepID=C9DTW6_9LAMI
Length = 233
Score = 190 bits (483), Expect = 4e-47
Identities = 93/101 (92%), Positives = 98/101 (97%)
Frame = +1
Query: 106 GGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQ 285
GGKLMSSDINELYRRVIYRNNTL DLLTTSR TPGEL+MCQEKLVQEAVDTLLDNGIRGQ
Sbjct: 1 GGKLMSSDINELYRRVIYRNNTLTDLLTTSRFTPGELIMCQEKLVQEAVDTLLDNGIRGQ 60
Query: 286 PMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
PM++ HN+VYKSFSD+IEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 61 PMRNSHNQVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 101
[177][TOP]
>UniRef100_B7T485 DNA-directed RNA polymerase n=1 Tax=Pelargonium cotyledonis
RepID=B7T485_9ROSI
Length = 689
Score = 180 bits (456), Expect = 5e-44
Identities = 88/135 (65%), Positives = 108/135 (80%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKH + TN++PEWMVLCLLPVLPP+LRPI +I + +SSDIN+LY++V+ +N L
Sbjct: 255 LAKHLLLTNVKPEWMVLCLLPVLPPKLRPIFKISEVQSISSDINKLYQKVLKKNQAFHRL 314
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
L +S+ P LV EK +Q+AVDTLLDNG GQP +D HNKVYKSFS++I GKEGRFRE
Sbjct: 315 LISSKYAPSSLVTGYEKELQQAVDTLLDNGRSGQPKRDYHNKVYKSFSEVISGKEGRFRE 374
Query: 364 TLLGKRVDYSGRSVI 408
TLLG+RVDYSGRSVI
Sbjct: 375 TLLGRRVDYSGRSVI 389
[178][TOP]
>UniRef100_Q5SCX9 DNA-directed RNA polymerase subunit beta' n=1 Tax=Huperzia lucidula
RepID=RPOC1_HUPLU
Length = 676
Score = 180 bits (456), Expect = 5e-44
Identities = 87/136 (63%), Positives = 110/136 (80%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
+L K FI+T PEWMVL +LPVLPPELRP+I+++ G+++SSDINELYRR+I+RNN LID
Sbjct: 257 KLIKFFIQTKTNPEWMVLSILPVLPPELRPMIRLNDGEIISSDINELYRRIIFRNNGLID 316
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L TP +++CQ+KLVQEAVD+L DN + +PM D + ++ KSFSDII+GKEGRFR
Sbjct: 317 FLEKRTFTPEGVIVCQKKLVQEAVDSLFDNSMCKEPMTDLNGRLLKSFSDIIQGKEGRFR 376
Query: 361 ETLLGKRVDYSGRSVI 408
E LLGKRVDYS RSVI
Sbjct: 377 ENLLGKRVDYSARSVI 392
[179][TOP]
>UniRef100_B1VKH4 DNA-directed RNA polymerase subunit beta' n=2 Tax=Cryptomeria
japonica RepID=RPOC1_CRYJA
Length = 698
Score = 179 bits (455), Expect = 7e-44
Identities = 87/137 (63%), Positives = 112/137 (81%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R AK+F+RTN+EP+WMVLCLLPVLPP+LRP+ Q++ G +++SD+NELY+ VI RNN ++
Sbjct: 268 RFAKYFLRTNVEPQWMVLCLLPVLPPDLRPMFQLNEGGVITSDLNELYQTVIRRNNNVLQ 327
Query: 181 LL-TTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRF 357
+ TTS +L+ Q+KLVQ+AVD LLDN I QP++D H++ YKSFSD I+GKEGRF
Sbjct: 328 FIETTSAFLIPDLLPDQKKLVQQAVDALLDNSIGTQPVRDSHDRPYKSFSDFIQGKEGRF 387
Query: 358 RETLLGKRVDYSGRSVI 408
RE LLGKRVDYSGRSVI
Sbjct: 388 RENLLGKRVDYSGRSVI 404
[180][TOP]
>UniRef100_B5D875 DNA-directed RNA polymerase (Fragment) n=1 Tax=Equisetum
ramosissimum RepID=B5D875_9TRAC
Length = 254
Score = 179 bits (454), Expect = 9e-44
Identities = 83/116 (71%), Positives = 102/116 (87%)
Frame = +1
Query: 61 LPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLV 240
LPVLPPELRP+ Q+ GG+L++SD+NELYR+++YRNN LI+ L + TP L++CQ++LV
Sbjct: 1 LPVLPPELRPMFQLVGGELVTSDLNELYRKILYRNNMLIEFLVKNEYTPEGLIICQKRLV 60
Query: 241 QEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
QEAVD+LLDNGIRGQP KD HN+ YKSFSD++EGKEGRFRE LLGKRVDYSGRSVI
Sbjct: 61 QEAVDSLLDNGIRGQPTKDSHNRPYKSFSDLLEGKEGRFRENLLGKRVDYSGRSVI 116
[181][TOP]
>UniRef100_B5D873 DNA-directed RNA polymerase (Fragment) n=1 Tax=Equisetum giganteum
RepID=B5D873_EQUGI
Length = 263
Score = 179 bits (454), Expect = 9e-44
Identities = 83/116 (71%), Positives = 102/116 (87%)
Frame = +1
Query: 61 LPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLV 240
LPVLPPELRP+ Q+ GG+L++SD+NELYR+++YRNN LI+ L + TP L++CQ++LV
Sbjct: 1 LPVLPPELRPMFQLVGGELVTSDLNELYRKILYRNNMLIEFLVKNEYTPEGLIICQKRLV 60
Query: 241 QEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
QEAVD+LLDNGIRGQP KD HN+ YKSFSD++EGKEGRFRE LLGKRVDYSGRSVI
Sbjct: 61 QEAVDSLLDNGIRGQPTKDSHNRSYKSFSDLLEGKEGRFRENLLGKRVDYSGRSVI 116
[182][TOP]
>UniRef100_B5D872 DNA-directed RNA polymerase (Fragment) n=2 Tax=Equisetum
RepID=B5D872_EQUGI
Length = 254
Score = 179 bits (454), Expect = 9e-44
Identities = 83/116 (71%), Positives = 102/116 (87%)
Frame = +1
Query: 61 LPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLV 240
LPVLPPELRP+ Q+ GG+L++SD+NELYR+++YRNN LI+ L + TP L++CQ++LV
Sbjct: 1 LPVLPPELRPMFQLVGGELVTSDLNELYRKILYRNNMLIEFLVKNEYTPEGLIICQKRLV 60
Query: 241 QEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
QEAVD+LLDNGIRGQP KD HN+ YKSFSD++EGKEGRFRE LLGKRVDYSGRSVI
Sbjct: 61 QEAVDSLLDNGIRGQPTKDSHNRPYKSFSDLLEGKEGRFRENLLGKRVDYSGRSVI 116
[183][TOP]
>UniRef100_B5D867 DNA-directed RNA polymerase (Fragment) n=1 Tax=Equisetum
ramosissimum subsp. debile RepID=B5D867_9TRAC
Length = 255
Score = 178 bits (452), Expect = 1e-43
Identities = 83/116 (71%), Positives = 101/116 (87%)
Frame = +1
Query: 61 LPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLV 240
LPVLPPELRP+ Q+ GG+L +SD+NELYR+++YRNN LI+ L + TP L++CQ++LV
Sbjct: 1 LPVLPPELRPMFQLVGGELXTSDLNELYRKILYRNNMLIEFLVKNEYTPEGLIICQKRLV 60
Query: 241 QEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
QEAVD+LLDNGIRGQP KD HN+ YKSFSD++EGKEGRFRE LLGKRVDYSGRSVI
Sbjct: 61 QEAVDSLLDNGIRGQPTKDSHNRPYKSFSDLLEGKEGRFRENLLGKRVDYSGRSVI 116
[184][TOP]
>UniRef100_B5D878 DNA-directed RNA polymerase (Fragment) n=1 Tax=Equisetum variegatum
RepID=B5D878_EQUVA
Length = 254
Score = 177 bits (448), Expect = 4e-43
Identities = 82/116 (70%), Positives = 101/116 (87%)
Frame = +1
Query: 61 LPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLV 240
LPVLPPELRP+ Q+ GG L++SD+NELYR+++YRNN LI+ L + TP L++CQ++LV
Sbjct: 1 LPVLPPELRPMFQLVGGDLVTSDLNELYRKILYRNNMLIEFLVKNEYTPEGLIICQKRLV 60
Query: 241 QEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
QEAVD+LLDNGIRGQP KD HN+ YKSFS+++EGKEGRFRE LLGKRVDYSGRSVI
Sbjct: 61 QEAVDSLLDNGIRGQPTKDSHNRPYKSFSELLEGKEGRFRENLLGKRVDYSGRSVI 116
[185][TOP]
>UniRef100_B5D876 DNA-directed RNA polymerase (Fragment) n=1 Tax=Equisetum scirpoides
RepID=B5D876_EQUSC
Length = 257
Score = 176 bits (447), Expect = 6e-43
Identities = 81/116 (69%), Positives = 101/116 (87%)
Frame = +1
Query: 61 LPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLV 240
LPV PPELRP+ ++ GG L++SD+NELYR+++YRNN LI+ L + TP L++CQ++LV
Sbjct: 1 LPVXPPELRPMFRLVGGDLVTSDLNELYRKILYRNNMLIEFLVKNEYTPEGLIICQKRLV 60
Query: 241 QEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
QEAVD+L+DNGIRGQPMKD HN+ YKSFSD++EGKEGRFRE LLGKRVDYSGRSVI
Sbjct: 61 QEAVDSLIDNGIRGQPMKDSHNRPYKSFSDLLEGKEGRFRENLLGKRVDYSGRSVI 116
[186][TOP]
>UniRef100_B7T2U0 DNA-directed RNA polymerase n=1 Tax=Erodium chrysanthum
RepID=B7T2U0_9ROSI
Length = 707
Score = 176 bits (445), Expect = 9e-43
Identities = 91/138 (65%), Positives = 109/138 (78%), Gaps = 3/138 (2%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMS---SDINELYRRVIYRNNTL 174
LAKHFIRT++EPEWMVL LLPVLPP LRP +S SDIN LY RV+ RN +
Sbjct: 273 LAKHFIRTSVEPEWMVLSLLPVLPPGLRPAAVHREELALSRRGSDINTLYGRVLSRNKEV 332
Query: 175 IDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGR 354
+ + T TP +++M Q+ L+QEAVDTLLDNG+RGQP++DG N+VYKSFSD+I+GKEGR
Sbjct: 333 LKFIRTP-FTPEDVIMSQQILLQEAVDTLLDNGVRGQPIRDGQNRVYKSFSDVIKGKEGR 391
Query: 355 FRETLLGKRVDYSGRSVI 408
FRETLLGKRVDYSGRSVI
Sbjct: 392 FRETLLGKRVDYSGRSVI 409
[187][TOP]
>UniRef100_A7P7C3 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
RepID=A7P7C3_VITVI
Length = 692
Score = 174 bits (440), Expect = 4e-42
Identities = 86/97 (88%), Positives = 89/97 (91%)
Frame = +1
Query: 118 MSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKD 297
M DINELYRRVIYRNNTL +LLTTS STPGELVMCQEKLVQEA+DTLLDNGIR QPM D
Sbjct: 1 MCQDINELYRRVIYRNNTLTNLLTTSTSTPGELVMCQEKLVQEAMDTLLDNGIREQPMSD 60
Query: 298 GHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
GHNKVYK FSD+IEGKEGRF ETLLGKRVDYSGRSVI
Sbjct: 61 GHNKVYKLFSDVIEGKEGRFHETLLGKRVDYSGRSVI 97
[188][TOP]
>UniRef100_B5D871 DNA-directed RNA polymerase (Fragment) n=2 Tax=Equisetum arvense
RepID=B5D871_EQUAR
Length = 253
Score = 172 bits (437), Expect = 8e-42
Identities = 80/114 (70%), Positives = 99/114 (86%)
Frame = +1
Query: 67 VLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQE 246
VLPPELRP+ Q+ GG+L++SD+NELYR+++YRNN LI+ L + TP L++CQ++LVQE
Sbjct: 1 VLPPELRPMFQLVGGELVTSDLNELYRKILYRNNMLIEFLVKNDYTPEGLIICQKRLVQE 60
Query: 247 AVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
AVD+L DNGIRGQP KD HN+ YKSFSD++EGKEGRFRE LLGKRVDYSGRSVI
Sbjct: 61 AVDSLFDNGIRGQPTKDSHNRPYKSFSDLLEGKEGRFRENLLGKRVDYSGRSVI 114
[189][TOP]
>UniRef100_B5T6T3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dryopteris
marginalis RepID=B5T6T3_9FILI
Length = 265
Score = 172 bits (436), Expect = 1e-41
Identities = 82/119 (68%), Positives = 104/119 (87%)
Frame = +1
Query: 52 LCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQE 231
L LLPVLPPELRPI++ G+L++SD+NELYR+VI+RNNT ++ L+ S TP L++CQ+
Sbjct: 1 LNLLPVLPPELRPIVESYEGELVTSDLNELYRKVIHRNNTPVEFLSGSEFTPEGLIVCQK 60
Query: 232 KLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
+L+QEAVD L+DNGIRGQPM+D +N+ YKSFS++IEGKEGRFRE LLGKRVDYSGRSVI
Sbjct: 61 RLIQEAVDALIDNGIRGQPMRDINNRPYKSFSEVIEGKEGRFRENLLGKRVDYSGRSVI 119
[190][TOP]
>UniRef100_B5T6T2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dryopteris
marginalis RepID=B5T6T2_9FILI
Length = 265
Score = 172 bits (436), Expect = 1e-41
Identities = 82/119 (68%), Positives = 104/119 (87%)
Frame = +1
Query: 52 LCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQE 231
L LLPVLPPELRPI++ G+L++SD+NELYR+VI+RNNT ++ L+ S TP L++CQ+
Sbjct: 1 LNLLPVLPPELRPIVESYEGELVTSDLNELYRKVIHRNNTPVEFLSGSEFTPEGLIVCQK 60
Query: 232 KLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
+L+QEAVD L+DNGIRGQPM+D +N+ YKSFS++IEGKEGRFRE LLGKRVDYSGRSVI
Sbjct: 61 RLIQEAVDALIDNGIRGQPMRDINNRPYKSFSEVIEGKEGRFRENLLGKRVDYSGRSVI 119
[191][TOP]
>UniRef100_B5KYB2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tortella arctica
RepID=B5KYB2_9BRYO
Length = 234
Score = 171 bits (432), Expect = 3e-41
Identities = 82/107 (76%), Positives = 94/107 (87%)
Frame = +1
Query: 88 PIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLD 267
P+I++ G+L++SD+NELYRRVIYRNNTLID S STPG LV+CQ +LVQEAVD L+D
Sbjct: 1 PMIELGEGELITSDLNELYRRVIYRNNTLIDFSARSGSTPGGLVVCQTRLVQEAVDALID 60
Query: 268 NGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
NGIRGQPMKD HN+ YKSFSD+IEGKEGRFRE LLGKRVDYSGRSVI
Sbjct: 61 NGIRGQPMKDSHNRPYKSFSDVIEGKEGRFRENLLGKRVDYSGRSVI 107
[192][TOP]
>UniRef100_Q06FX0 DNA-directed RNA polymerase subunit beta' n=1 Tax=Pelargonium x
hortorum RepID=RPOC1_PELHO
Length = 701
Score = 170 bits (430), Expect = 5e-41
Identities = 84/135 (62%), Positives = 104/135 (77%)
Frame = +1
Query: 4 LAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDL 183
LAKHF+ TN++PEWM+L LLPVLPPELRPI +I + +SSD+N LY+ VI N L D
Sbjct: 272 LAKHFLETNVKPEWMILRLLPVLPPELRPIFKISEVQFISSDLNTLYKEVISNNKILSDS 331
Query: 184 LTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRE 363
L + P +L+ QEK+VQ AVD LLDN I GQP +D + ++YKSFSDI+ GKEGRFR+
Sbjct: 332 LLGCKFVPEQLLTGQEKIVQVAVDQLLDNRISGQPRRDRNKQLYKSFSDILAGKEGRFRQ 391
Query: 364 TLLGKRVDYSGRSVI 408
TLLG+RVDYSGRSVI
Sbjct: 392 TLLGRRVDYSGRSVI 406
[193][TOP]
>UniRef100_B5T6S7 DNA-directed RNA polymerase (Fragment) n=2 Tax=Dryopteris
RepID=B5T6S7_9FILI
Length = 265
Score = 169 bits (429), Expect = 7e-41
Identities = 81/119 (68%), Positives = 103/119 (86%)
Frame = +1
Query: 52 LCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQE 231
L LLPVLPPELRPI++ G+L++SD+NELYR+VI+RNNT ++ L+ S TP L++CQ+
Sbjct: 1 LNLLPVLPPELRPIVESYEGELVTSDLNELYRKVIHRNNTPVEFLSGSEFTPEGLIVCQK 60
Query: 232 KLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
+L+QEAVD +DNGIRGQPM+D +N+ YKSFS++IEGKEGRFRE LLGKRVDYSGRSVI
Sbjct: 61 RLIQEAVDAPIDNGIRGQPMRDINNRPYKSFSEVIEGKEGRFRENLLGKRVDYSGRSVI 119
[194][TOP]
>UniRef100_B5T6S6 DNA-directed RNA polymerase (Fragment) n=2 Tax=Dryopteris
RepID=B5T6S6_9FILI
Length = 265
Score = 169 bits (427), Expect = 1e-40
Identities = 81/119 (68%), Positives = 102/119 (85%)
Frame = +1
Query: 52 LCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQE 231
L LLPVLPPELRPI++ G+L++SD+NELYR+VI+RNNT ++ L+ S TP L+ CQ+
Sbjct: 1 LNLLPVLPPELRPIVESYEGELVTSDLNELYRKVIHRNNTPVEFLSGSEFTPEGLIACQK 60
Query: 232 KLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
+L+QEAVD +DNGIRGQPM+D +N+ YKSFS++IEGKEGRFRE LLGKRVDYSGRSVI
Sbjct: 61 RLIQEAVDAPIDNGIRGQPMRDINNRPYKSFSEVIEGKEGRFRENLLGKRVDYSGRSVI 119
[195][TOP]
>UniRef100_Q1ACN5 DNA-directed RNA polymerase subunit beta' n=1 Tax=Chara vulgaris
RepID=RPOC1_CHAVU
Length = 666
Score = 168 bits (426), Expect = 2e-40
Identities = 78/136 (57%), Positives = 106/136 (77%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
++A +F T I+P+WMVL +PVLPP+LRP+I ++ G L +SD+N+LYR+V+YRN TL +
Sbjct: 249 KIASYFQETKIKPQWMVLSTIPVLPPDLRPMIHLNDGPLATSDLNDLYRKVLYRNKTLWE 308
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P L++ Q++LVQEAVD L+DNG+ G PM+D +N+ YKS SD+I GK+GRFR
Sbjct: 309 LRQGIWPAPHSLMISQKRLVQEAVDALIDNGLGGPPMRDSNNRPYKSLSDVISGKQGRFR 368
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 369 QNLLGKRVDYSGRSVI 384
[196][TOP]
>UniRef100_B5D866 DNA-directed RNA polymerase (Fragment) n=1 Tax=Equisetum palustre
RepID=B5D866_EQUPA
Length = 249
Score = 166 bits (421), Expect = 6e-40
Identities = 77/110 (70%), Positives = 96/110 (87%)
Frame = +1
Query: 79 ELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDT 258
ELRP+ Q+ GG+L++SD+NELYR+++YRNN LI+ L + TP L++CQ++LVQEAVD+
Sbjct: 1 ELRPMFQLVGGELVTSDLNELYRKILYRNNMLIEFLVKNEYTPEGLIICQKRLVQEAVDS 60
Query: 259 LLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
LLDNGIRGQP KD HN+ YKSFSD++EGKEGRFRE LLGKRVDYSGRSVI
Sbjct: 61 LLDNGIRGQPTKDSHNRPYKSFSDLLEGKEGRFRENLLGKRVDYSGRSVI 110
[197][TOP]
>UniRef100_B5KYC2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tortella inclinata
RepID=B5KYC2_9BRYO
Length = 232
Score = 166 bits (420), Expect = 8e-40
Identities = 80/104 (76%), Positives = 91/104 (87%)
Frame = +1
Query: 97 QIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGI 276
++ G+L++SD+NELYRRVIYRNNTLID S STPG LV+CQ +LVQEAVD L+DNGI
Sbjct: 1 ELGEGELITSDLNELYRRVIYRNNTLIDFSARSGSTPGGLVVCQTRLVQEAVDALIDNGI 60
Query: 277 RGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
RGQPMKD HN+ YKSFSD+IEGKEGRFRE LLGKRVDYSGRSVI
Sbjct: 61 RGQPMKDSHNRPYKSFSDVIEGKEGRFRENLLGKRVDYSGRSVI 104
[198][TOP]
>UniRef100_B5KYC1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tortella fragilis
RepID=B5KYC1_9BRYO
Length = 233
Score = 166 bits (420), Expect = 8e-40
Identities = 80/104 (76%), Positives = 91/104 (87%)
Frame = +1
Query: 97 QIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGI 276
++ G+L++SD+NELYRRVIYRNNTLID S STPG LV+CQ +LVQEAVD L+DNGI
Sbjct: 1 ELGEGELITSDLNELYRRVIYRNNTLIDFSVRSGSTPGGLVVCQTRLVQEAVDALIDNGI 60
Query: 277 RGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
RGQPMKD HN+ YKSFSD+IEGKEGRFRE LLGKRVDYSGRSVI
Sbjct: 61 RGQPMKDSHNRPYKSFSDVIEGKEGRFRENLLGKRVDYSGRSVI 104
[199][TOP]
>UniRef100_B5KYA7 DNA-directed RNA polymerase (Fragment) n=4 Tax=Pottiaceae
RepID=B5KYA7_9BRYO
Length = 233
Score = 166 bits (420), Expect = 8e-40
Identities = 80/104 (76%), Positives = 91/104 (87%)
Frame = +1
Query: 97 QIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGI 276
++ G+L++SD+NELYRRVIYRNNTLID S STPG LV+CQ +LVQEAVD L+DNGI
Sbjct: 1 ELGEGELITSDLNELYRRVIYRNNTLIDFSARSGSTPGGLVVCQTRLVQEAVDALIDNGI 60
Query: 277 RGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
RGQPMKD HN+ YKSFSD+IEGKEGRFRE LLGKRVDYSGRSVI
Sbjct: 61 RGQPMKDSHNRPYKSFSDVIEGKEGRFRENLLGKRVDYSGRSVI 104
[200][TOP]
>UniRef100_B5KYC0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tortella fragilis
RepID=B5KYC0_9BRYO
Length = 228
Score = 166 bits (419), Expect = 1e-39
Identities = 80/100 (80%), Positives = 89/100 (89%)
Frame = +1
Query: 109 GKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 288
G+L++SD+NELYRRVIYRNNTLID S STPG LV+CQ +LVQEAVD L+DNGIRGQP
Sbjct: 1 GELITSDLNELYRRVIYRNNTLIDFSVRSGSTPGGLVVCQTRLVQEAVDALIDNGIRGQP 60
Query: 289 MKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
MKD HN+ YKSFSD+IEGKEGRFRE LLGKRVDYSGRSVI
Sbjct: 61 MKDSHNRPYKSFSDVIEGKEGRFRENLLGKRVDYSGRSVI 100
[201][TOP]
>UniRef100_B5D864 DNA-directed RNA polymerase (Fragment) n=1 Tax=Equisetum palustre
RepID=B5D864_EQUPA
Length = 248
Score = 164 bits (415), Expect = 3e-39
Identities = 76/110 (69%), Positives = 95/110 (86%)
Frame = +1
Query: 79 ELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDT 258
ELRP+ Q+ GG+L++SD+NELYR+++YRNN LI+ L + TP L++CQ++LVQEAVD+
Sbjct: 1 ELRPMFQLVGGELVTSDLNELYRKILYRNNMLIEFLVKNDYTPEGLIICQKRLVQEAVDS 60
Query: 259 LLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
L DNGIRGQP KD HN+ YKSFSD++EGKEGRFRE LLGKRVDYSGRSVI
Sbjct: 61 LFDNGIRGQPTKDSHNRPYKSFSDLLEGKEGRFRENLLGKRVDYSGRSVI 110
[202][TOP]
>UniRef100_B5D860 DNA-directed RNA polymerase (Fragment) n=1 Tax=Equisetum variegatum
RepID=B5D860_EQUVA
Length = 263
Score = 164 bits (415), Expect = 3e-39
Identities = 76/110 (69%), Positives = 95/110 (86%)
Frame = +1
Query: 79 ELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDT 258
ELRP+ Q+ GG L++SD+NELYR+++YRNN LI+ L + TP L++CQ++LVQEAVD+
Sbjct: 1 ELRPMFQLVGGDLVTSDLNELYRKILYRNNMLIEFLVKNEYTPEGLIICQKRLVQEAVDS 60
Query: 259 LLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
LLDNGIRGQP KD HN+ YKSFS+++EGKEGRFRE LLGKRVDYSGRSVI
Sbjct: 61 LLDNGIRGQPTKDSHNRPYKSFSELLEGKEGRFRENLLGKRVDYSGRSVI 110
[203][TOP]
>UniRef100_B5D868 DNA-directed RNA polymerase (Fragment) n=1 Tax=Equisetum x dycei
RepID=B5D868_9TRAC
Length = 249
Score = 163 bits (413), Expect = 5e-39
Identities = 75/110 (68%), Positives = 95/110 (86%)
Frame = +1
Query: 79 ELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDT 258
ELRP+ Q+ GG+L++SD+NELYR+++YRNN L++ L + TP L++CQ++LVQEAVD+
Sbjct: 1 ELRPMFQLVGGELVTSDLNELYRKILYRNNMLLEFLVKNDYTPEGLIICQKRLVQEAVDS 60
Query: 259 LLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
L DNGIRGQP KD HN+ YKSFSD++EGKEGRFRE LLGKRVDYSGRSVI
Sbjct: 61 LFDNGIRGQPTKDSHNRPYKSFSDLLEGKEGRFRENLLGKRVDYSGRSVI 110
[204][TOP]
>UniRef100_B7T1S5 DNA-directed RNA polymerase n=1 Tax=Vaucheria litorea
RepID=B7T1S5_VAULI
Length = 611
Score = 161 bits (407), Expect = 2e-38
Identities = 78/136 (57%), Positives = 108/136 (79%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ + F+ T+ +PEWM+L +LPV+PP LRP++Q++GG+ + SD+NELYR++IYRN+ L +
Sbjct: 213 RILESFLITHSKPEWMILTVLPVIPPGLRPLVQLEGGQFVVSDLNELYRKLIYRNDRLAN 272
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L++S STPG +V +++LVQEAVD L+DNG RG D +N+ KS +D IEGK+GRFR
Sbjct: 273 FLSSS-STPGIIVRSEKRLVQEAVDALIDNGKRGPKAVDINNRPLKSLADTIEGKQGRFR 331
Query: 361 ETLLGKRVDYSGRSVI 408
LLGKRVDYSGRSVI
Sbjct: 332 LNLLGKRVDYSGRSVI 347
[205][TOP]
>UniRef100_Q9MUS6 DNA-directed RNA polymerase subunit beta' n=1 Tax=Mesostigma viride
RepID=RPOC1_MESVI
Length = 668
Score = 158 bits (399), Expect = 2e-37
Identities = 80/137 (58%), Positives = 106/137 (77%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ HFI T +PEWMVL +LPVLPPELRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 267 RIINHFIATGAKPEWMVLSILPVLPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLAK 326
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKV-YKSFSDIIEGKEGRF 357
L + P +V +++++QE+VD L+DNG RG+ + G+NK+ KS SDII+GK+GRF
Sbjct: 327 L--NNMLAPEIVVRSEKRMLQESVDALIDNGKRGKALV-GNNKIPLKSLSDIIKGKQGRF 383
Query: 358 RETLLGKRVDYSGRSVI 408
R+ LLGKRVDYSGRSVI
Sbjct: 384 RQNLLGKRVDYSGRSVI 400
[206][TOP]
>UniRef100_Q19V99 DNA-directed RNA polymerase subunit beta' n=1 Tax=Chlorokybus
atmophyticus RepID=RPOC1_CHLAT
Length = 717
Score = 157 bits (396), Expect = 5e-37
Identities = 78/137 (56%), Positives = 104/137 (75%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
++ HF+ T +PEWM+L +LPVLPP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 242 KIINHFLATGAKPEWMILSILPVLPPDLRPMVQLDGGQFATSDLNDLYRRVINRNNRLSK 301
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKV-YKSFSDIIEGKEGRF 357
L T P +V +++++QEAVD L+DNG RG+ G NK+ KS SDII+GK+GRF
Sbjct: 302 LNT--MLAPEIVVRSEKRMLQEAVDALIDNGKRGRQALVGSNKIPLKSLSDIIKGKQGRF 359
Query: 358 RETLLGKRVDYSGRSVI 408
R+ LLGKRVDYSGRSVI
Sbjct: 360 RQNLLGKRVDYSGRSVI 376
[207][TOP]
>UniRef100_A2BT60 DNA-directed RNA polymerase subunit gamma n=1 Tax=Prochlorococcus
marinus str. AS9601 RepID=RPOC1_PROMS
Length = 634
Score = 156 bits (395), Expect = 6e-37
Identities = 77/136 (56%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI TN +PEWMVL +PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFIATNAKPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRALKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[208][TOP]
>UniRef100_Q318Q8 DNA-directed RNA polymerase subunit gamma n=1 Tax=Prochlorococcus
marinus str. MIT 9312 RepID=RPOC1_PROM9
Length = 634
Score = 156 bits (395), Expect = 6e-37
Identities = 77/136 (56%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI TN +PEWMVL +PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFIATNAKPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRALKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[209][TOP]
>UniRef100_A2BYL0 DNA-directed RNA polymerase subunit gamma n=1 Tax=Prochlorococcus
marinus str. MIT 9515 RepID=RPOC1_PROM5
Length = 634
Score = 156 bits (395), Expect = 6e-37
Identities = 77/136 (56%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI TN +PEWMVL +PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFIATNAKPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRALKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[210][TOP]
>UniRef100_A8G6Y5 DNA-directed RNA polymerase subunit gamma n=2 Tax=Prochlorococcus
marinus RepID=RPOC1_PROM2
Length = 634
Score = 156 bits (395), Expect = 6e-37
Identities = 77/136 (56%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI TN +PEWMVL +PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFIATNAKPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRALKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[211][TOP]
>UniRef100_A3PEX3 DNA-directed RNA polymerase subunit gamma n=1 Tax=Prochlorococcus
marinus str. MIT 9301 RepID=RPOC1_PROM0
Length = 634
Score = 156 bits (395), Expect = 6e-37
Identities = 77/136 (56%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI TN +PEWMVL +PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFIATNAKPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRALKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[212][TOP]
>UniRef100_UPI0001966A83 hypothetical protein SUBVAR_00651 n=1 Tax=Subdoligranulum variabile
DSM 15176 RepID=UPI0001966A83
Length = 1200
Score = 156 bits (394), Expect = 8e-37
Identities = 73/131 (55%), Positives = 102/131 (77%)
Frame = +1
Query: 16 FIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTS 195
FI +N PEWM+L ++PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L LL
Sbjct: 215 FIESNQRPEWMILTVIPVIPPDLRPLLQLDGGRFATSDLNDLYRRVINRNNRLKRLLELG 274
Query: 196 RSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLG 375
P +V +++++QEAVD L+DNG RG+P+ +N+ KS SD+++GK+GRFR+ LLG
Sbjct: 275 --APDIIVRNEKRMLQEAVDALIDNGRRGRPVTGANNRALKSLSDMLKGKQGRFRQNLLG 332
Query: 376 KRVDYSGRSVI 408
KRVDYSGRSVI
Sbjct: 333 KRVDYSGRSVI 343
[213][TOP]
>UniRef100_Q05WE8 DNA-directed RNA polymerase n=1 Tax=Synechococcus sp. RS9916
RepID=Q05WE8_9SYNE
Length = 634
Score = 156 bits (394), Expect = 8e-37
Identities = 77/136 (56%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI TN PEWMVL ++PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFIATNARPEWMVLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[214][TOP]
>UniRef100_D0CGV1 DNA-directed RNA polymerase, gamma subunit n=1 Tax=Synechococcus
sp. WH 8109 RepID=D0CGV1_9SYNE
Length = 634
Score = 156 bits (394), Expect = 8e-37
Identities = 77/136 (56%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI TN PEWMVL ++PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFIATNARPEWMVLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[215][TOP]
>UniRef100_B5ILY0 DNA-directed RNA polymerase n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5ILY0_9CHRO
Length = 634
Score = 156 bits (394), Expect = 8e-37
Identities = 76/136 (55%), Positives = 104/136 (76%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI TN +P+WMVL ++PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFIATNAKPDWMVLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRALKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[216][TOP]
>UniRef100_A4CR15 DNA-directed RNA polymerase n=1 Tax=Synechococcus sp. WH 7805
RepID=A4CR15_SYNPV
Length = 634
Score = 156 bits (394), Expect = 8e-37
Identities = 77/136 (56%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI TN PEWMVL ++PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFIATNARPEWMVLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[217][TOP]
>UniRef100_A3Z9B8 DNA-directed RNA polymerase n=1 Tax=Synechococcus sp. RS9917
RepID=A3Z9B8_9SYNE
Length = 634
Score = 156 bits (394), Expect = 8e-37
Identities = 77/136 (56%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI TN PEWMVL ++PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFIATNARPEWMVLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[218][TOP]
>UniRef100_Q3AHX6 DNA-directed RNA polymerase subunit gamma n=1 Tax=Synechococcus sp.
CC9605 RepID=RPOC1_SYNSC
Length = 634
Score = 156 bits (394), Expect = 8e-37
Identities = 77/136 (56%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI TN PEWMVL ++PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFIATNARPEWMVLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[219][TOP]
>UniRef100_Q55346 DNA-directed RNA polymerase subunit gamma n=1 Tax=Synechococcus sp.
WH 7803 RepID=RPOC1_SYNPW
Length = 634
Score = 156 bits (394), Expect = 8e-37
Identities = 77/136 (56%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI TN PEWMVL ++PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFIATNARPEWMVLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[220][TOP]
>UniRef100_P42080 DNA-directed RNA polymerase subunit beta' n=1 Tax=Cyanophora
paradoxa RepID=RPOC1_CYAPA
Length = 636
Score = 156 bits (394), Expect = 8e-37
Identities = 76/136 (55%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI T +PEWM+L L+PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L+
Sbjct: 233 RIINNFIATKAKPEWMILSLIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLLR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEV--FAPEIVVRNEKRILQEAVDALIDNGRRGRIVVGAKNRPLKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[221][TOP]
>UniRef100_Q0VUP7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Prochlorococcus
marinus str. EQPAC1 RepID=Q0VUP7_PROMA
Length = 502
Score = 155 bits (393), Expect = 1e-36
Identities = 76/136 (55%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +F+ TN +PEWMVL +PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 113 RVIDNFLATNAKPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 172
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 173 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRALKSLSDIIEGKQGRFR 230
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 231 QNLLGKRVDYSGRSVI 246
[222][TOP]
>UniRef100_Q7V007 DNA-directed RNA polymerase subunit gamma n=1 Tax=Prochlorococcus
marinus subsp. pastoris str. CCMP1986 RepID=RPOC1_PROMP
Length = 634
Score = 155 bits (393), Expect = 1e-36
Identities = 76/136 (55%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +F+ TN +PEWMVL +PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFLATNAKPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRALKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[223][TOP]
>UniRef100_P42076 DNA-directed RNA polymerase subunit gamma n=1 Tax=Prochlorococcus
marinus RepID=RPOC1_PROMA
Length = 634
Score = 155 bits (393), Expect = 1e-36
Identities = 77/136 (56%), Positives = 102/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI TN PEWMVL +PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFIATNARPEWMVLNAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALVDNGRRGRTVVGANNRALKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[224][TOP]
>UniRef100_A9BCH5 DNA-directed RNA polymerase subunit gamma n=1 Tax=Prochlorococcus
marinus str. MIT 9211 RepID=RPOC1_PROM4
Length = 633
Score = 155 bits (393), Expect = 1e-36
Identities = 77/136 (56%), Positives = 102/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI TN PEWMVL +PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFIATNARPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALVDNGRRGRTVVGANNRALKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[225][TOP]
>UniRef100_Q0I7L8 DNA-directed RNA polymerase subunit gamma n=1 Tax=Synechococcus sp.
CC9311 RepID=RPOC1_SYNS3
Length = 634
Score = 155 bits (392), Expect = 1e-36
Identities = 77/136 (56%), Positives = 102/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI TN PEWMVL +PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFIATNARPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[226][TOP]
>UniRef100_Q7V5P2 DNA-directed RNA polymerase subunit gamma n=1 Tax=Prochlorococcus
marinus str. MIT 9313 RepID=RPOC1_PROMM
Length = 634
Score = 155 bits (392), Expect = 1e-36
Identities = 77/136 (56%), Positives = 102/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI TN PEWMVL +PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFIATNARPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[227][TOP]
>UniRef100_A2C6S9 DNA-directed RNA polymerase subunit gamma n=1 Tax=Prochlorococcus
marinus str. MIT 9303 RepID=RPOC1_PROM3
Length = 634
Score = 155 bits (392), Expect = 1e-36
Identities = 77/136 (56%), Positives = 102/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI TN PEWMVL +PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFIATNARPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[228][TOP]
>UniRef100_B7JWQ8 DNA-directed RNA polymerase subunit gamma n=2 Tax=Cyanothece
RepID=RPOC1_CYAP8
Length = 625
Score = 155 bits (392), Expect = 1e-36
Identities = 75/136 (55%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +F+ TN P+WMVL ++PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 229 RVIDNFVATNSRPDWMVLSVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLSR 288
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 289 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRALKSLSDIIEGKQGRFR 346
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 347 QNLLGKRVDYSGRSVI 362
[229][TOP]
>UniRef100_Q8DL56 DNA-directed RNA polymerase subunit gamma n=1
Tax=Thermosynechococcus elongatus BP-1 RepID=RPOC1_THEEB
Length = 622
Score = 155 bits (391), Expect = 2e-36
Identities = 76/136 (55%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI T +PEWMVL ++PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 228 RVIDNFIATGAKPEWMVLTVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 287
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 288 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 345
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 346 QNLLGKRVDYSGRSVI 361
[230][TOP]
>UniRef100_B4VKP9 DNA-directed RNA polymerase n=1 Tax=Microcoleus chthonoplastes PCC
7420 RepID=B4VKP9_9CYAN
Length = 627
Score = 154 bits (390), Expect = 2e-36
Identities = 75/136 (55%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI T +P+WMVL ++PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 229 RVIDNFIATGSQPDWMVLTVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 288
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 289 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRALKSLSDIIEGKQGRFR 346
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 347 QNLLGKRVDYSGRSVI 362
[231][TOP]
>UniRef100_Q2JJ18 DNA-directed RNA polymerase subunit gamma n=1 Tax=Synechococcus sp.
JA-2-3B'a(2-13) RepID=RPOC1_SYNJB
Length = 627
Score = 154 bits (390), Expect = 2e-36
Identities = 77/136 (56%), Positives = 102/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI T PEWMVL +LPV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 230 RVIDNFIATGSRPEWMVLRVLPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 289
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 290 LQEIM--APEIIVRNEKRMLQEAVDALIDNGRRGRVVAGANNRPLKSLSDIIEGKQGRFR 347
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 348 QNLLGKRVDYSGRSVI 363
[232][TOP]
>UniRef100_Q2JQT5 DNA-directed RNA polymerase subunit gamma n=1 Tax=Synechococcus sp.
JA-3-3Ab RepID=RPOC1_SYNJA
Length = 627
Score = 154 bits (390), Expect = 2e-36
Identities = 77/136 (56%), Positives = 102/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI T PEWMVL +LPV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 230 RVIDNFIATGARPEWMVLRVLPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 289
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 290 LQEIM--APEIIVRNEKRMLQEAVDALIDNGRRGRMVVGANNRPLKSLSDIIEGKQGRFR 347
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 348 QNLLGKRVDYSGRSVI 363
[233][TOP]
>UniRef100_B9YNQ0 DNA-directed RNA polymerase n=1 Tax='Nostoc azollae' 0708
RepID=B9YNQ0_ANAAZ
Length = 625
Score = 154 bits (389), Expect = 3e-36
Identities = 75/136 (55%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI T +PEWMV+ ++PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 229 RVIDNFIATGSKPEWMVMAVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 288
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 289 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 346
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 347 QNLLGKRVDYSGRSVI 362
[234][TOP]
>UniRef100_A0ZH97 DNA-directed RNA polymerase n=1 Tax=Nodularia spumigena CCY9414
RepID=A0ZH97_NODSP
Length = 625
Score = 154 bits (389), Expect = 3e-36
Identities = 75/136 (55%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI T +PEWMV+ ++PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 229 RVIDNFIATGSKPEWMVMAVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 288
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 289 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 346
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 347 QNLLGKRVDYSGRSVI 362
[235][TOP]
>UniRef100_C9DTU7 RNA polymerase beta subunit (Fragment) n=1 Tax=Vismia baccifera
RepID=C9DTU7_9ROSI
Length = 243
Score = 154 bits (389), Expect = 3e-36
Identities = 78/108 (72%), Positives = 87/108 (80%)
Frame = +1
Query: 85 RPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLL 264
RPIIQIDGGK S INELYRRV+ RN +LLTT++S V+ Q+ LVQEAVDTLL
Sbjct: 1 RPIIQIDGGKEWVSPINELYRRVLLRNKVFTNLLTTTKSALDHAVIYQQNLVQEAVDTLL 60
Query: 265 DNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
DNGI G PM+D HNK YKSFSDII GKEGRFR+T+LGKRVDYSGRSVI
Sbjct: 61 DNGIGGHPMRDRHNKAYKSFSDIISGKEGRFRKTMLGKRVDYSGRSVI 108
[236][TOP]
>UniRef100_B2J199 DNA-directed RNA polymerase subunit gamma n=1 Tax=Nostoc
punctiforme PCC 73102 RepID=RPOC1_NOSP7
Length = 625
Score = 154 bits (389), Expect = 3e-36
Identities = 75/136 (55%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI T +PEWMV+ ++PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 229 RVIDNFIATGSKPEWMVMAVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 288
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 289 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 346
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 347 QNLLGKRVDYSGRSVI 362
[237][TOP]
>UniRef100_P14563 DNA-directed RNA polymerase subunit gamma n=1 Tax=Nostoc commune
RepID=RPOC1_NOSCO
Length = 621
Score = 154 bits (389), Expect = 3e-36
Identities = 75/136 (55%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI T +PEWMV+ ++PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 227 RVIDNFIATGSKPEWMVMAVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 286
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 287 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 344
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 345 QNLLGKRVDYSGRSVI 360
[238][TOP]
>UniRef100_Q0VUQ2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Prochlorococcus
marinus str. SB RepID=Q0VUQ2_PROMA
Length = 550
Score = 154 bits (388), Expect = 4e-36
Identities = 75/136 (55%), Positives = 102/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI TN +PEWMVL +PV+PP+LRP++Q+DGG+ +SD+N+LYR+VI RNN L
Sbjct: 161 RVIDNFIATNAKPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRKVINRNNRLAR 220
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 221 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRALKSLSDIIEGKQGRFR 278
Query: 361 ETLLGKRVDYSGRSVI 408
+ LGKRVDYSGRSVI
Sbjct: 279 QNFLGKRVDYSGRSVI 294
[239][TOP]
>UniRef100_B5KYB1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pleurochaete
squarrosa RepID=B5KYB1_9BRYO
Length = 218
Score = 154 bits (388), Expect = 4e-36
Identities = 75/91 (82%), Positives = 80/91 (87%)
Frame = +1
Query: 136 ELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVY 315
ELYRRVIYRNNTLID S STPG LV+CQ +LVQEAVD L+DNGIRGQPMKD HN+ Y
Sbjct: 1 ELYRRVIYRNNTLIDFSARSGSTPGGLVVCQTRLVQEAVDALIDNGIRGQPMKDSHNRPY 60
Query: 316 KSFSDIIEGKEGRFRETLLGKRVDYSGRSVI 408
KSFSD+IEGKEGRFRE LLGKRVDYSGRSVI
Sbjct: 61 KSFSDVIEGKEGRFRENLLGKRVDYSGRSVI 91
[240][TOP]
>UniRef100_Q7U8K3 DNA-directed RNA polymerase subunit gamma n=1 Tax=Synechococcus sp.
WH 8102 RepID=RPOC1_SYNPX
Length = 634
Score = 154 bits (388), Expect = 4e-36
Identities = 75/136 (55%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +F+ T+ PEWMVL ++PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFVATSARPEWMVLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[241][TOP]
>UniRef100_Q3M5C9 DNA-directed RNA polymerase subunit gamma n=1 Tax=Anabaena
variabilis ATCC 29413 RepID=RPOC1_ANAVT
Length = 625
Score = 154 bits (388), Expect = 4e-36
Identities = 75/136 (55%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI T +PEWMV+ ++PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 229 RVIDNFIATGSKPEWMVMTVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 288
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 289 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 346
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 347 QNLLGKRVDYSGRSVI 362
[242][TOP]
>UniRef100_P22704 DNA-directed RNA polymerase subunit gamma n=1 Tax=Nostoc sp. PCC
7120 RepID=RPOC1_ANASP
Length = 625
Score = 154 bits (388), Expect = 4e-36
Identities = 75/136 (55%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI T +PEWMV+ ++PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 229 RVIDNFIATGSKPEWMVMTVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 288
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 289 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 346
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 347 QNLLGKRVDYSGRSVI 362
[243][TOP]
>UniRef100_Q0VUQ3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Prochlorococcus
marinus str. GP2 RepID=Q0VUQ3_PROMA
Length = 438
Score = 153 bits (387), Expect = 5e-36
Identities = 76/136 (55%), Positives = 102/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI TN +PEWMVL +PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 113 RVIDNFIATNAKPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 172
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+ RFR
Sbjct: 173 L--QEILAPEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRALKSLSDIIEGKQRRFR 230
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 231 QNLLGKRVDYSGRSVI 246
[244][TOP]
>UniRef100_B4B4N5 DNA-directed RNA polymerase n=1 Tax=Cyanothece sp. PCC 7822
RepID=B4B4N5_9CHRO
Length = 625
Score = 153 bits (387), Expect = 5e-36
Identities = 75/136 (55%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI T +P+WMVL ++PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 229 RVIDNFIATGSQPDWMVLTVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLSR 288
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 289 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 346
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 347 QNLLGKRVDYSGRSVI 362
[245][TOP]
>UniRef100_A0YLV2 DNA-directed RNA polymerase n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0YLV2_9CYAN
Length = 629
Score = 153 bits (387), Expect = 5e-36
Identities = 75/136 (55%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI T +PEWMVL ++PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 228 RVIDNFIATGSKPEWMVLHVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 287
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P ++ +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 288 LQEIL--APEIIIRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 345
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 346 QNLLGKRVDYSGRSVI 361
[246][TOP]
>UniRef100_A5GVF1 DNA-directed RNA polymerase subunit gamma n=1 Tax=Synechococcus sp.
RCC307 RepID=RPOC1_SYNR3
Length = 634
Score = 153 bits (387), Expect = 5e-36
Identities = 76/136 (55%), Positives = 102/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI T+ PEWMVL +PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFIATDARPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[247][TOP]
>UniRef100_Q46J23 DNA-directed RNA polymerase subunit gamma n=1 Tax=Prochlorococcus
marinus str. NATL2A RepID=RPOC1_PROMT
Length = 635
Score = 153 bits (387), Expect = 5e-36
Identities = 76/136 (55%), Positives = 102/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI T+ PEWMVL +PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFIATSASPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[248][TOP]
>UniRef100_A2C4N1 DNA-directed RNA polymerase subunit gamma n=1 Tax=Prochlorococcus
marinus str. NATL1A RepID=RPOC1_PROM1
Length = 635
Score = 153 bits (387), Expect = 5e-36
Identities = 76/136 (55%), Positives = 102/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI T+ PEWMVL +PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 233 RVIDNFIATSASPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 292
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 293 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 350
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 351 QNLLGKRVDYSGRSVI 366
[249][TOP]
>UniRef100_Q7NDF8 DNA-directed RNA polymerase subunit gamma n=1 Tax=Gloeobacter
violaceus RepID=RPOC1_GLOVI
Length = 608
Score = 153 bits (387), Expect = 5e-36
Identities = 76/136 (55%), Positives = 101/136 (74%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI T PEWMVL +PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 230 RVLDNFIATGSRPEWMVLTAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLAR 289
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 290 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 347
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 348 QNLLGKRVDYSGRSVI 363
[250][TOP]
>UniRef100_B7KK78 DNA-directed RNA polymerase subunit gamma n=1 Tax=Cyanothece sp.
PCC 7424 RepID=RPOC1_CYAP7
Length = 625
Score = 153 bits (387), Expect = 5e-36
Identities = 75/136 (55%), Positives = 103/136 (75%)
Frame = +1
Query: 1 RLAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLID 180
R+ +FI T +P+WMVL ++PV+PP+LRP++Q+DGG+ +SD+N+LYRRVI RNN L
Sbjct: 229 RVIDNFIATGSQPDWMVLTVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLSR 288
Query: 181 LLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMKDGHNKVYKSFSDIIEGKEGRFR 360
L P +V +++++QEAVD L+DNG RG+ + +N+ KS SDIIEGK+GRFR
Sbjct: 289 LQEIL--APEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR 346
Query: 361 ETLLGKRVDYSGRSVI 408
+ LLGKRVDYSGRSVI
Sbjct: 347 QNLLGKRVDYSGRSVI 362