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[1][TOP]
>UniRef100_P29344 30S ribosomal protein S1, chloroplastic n=1 Tax=Spinacia oleracea
RepID=RR1_SPIOL
Length = 411
Score = 268 bits (684), Expect = 2e-70
Identities = 134/158 (84%), Positives = 150/158 (94%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
VIIGENE+DD+L LSL+ IQ+ LAWERCRQLQAED VVKGKIV ANKGGVVA VEGL+GF
Sbjct: 150 VIIGENEADDSLILSLRQIQYELAWERCRQLQAEDVVVKGKIVGANKGGVVALVEGLRGF 209
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLGIGSVVTGSVQ 361
VPFSQIS+KS+ EELLEKEIPLKFVEVDEEQSRL++S+RKA+ADSQ QLGIGSVVTG+VQ
Sbjct: 210 VPFSQISSKSSAEELLEKEIPLKFVEVDEEQSRLVMSNRKAMADSQAQLGIGSVVTGTVQ 269
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
SLKPYGAFIDIGGI+GLLHVSQISHDR++DI+TVLQPG
Sbjct: 270 SLKPYGAFIDIGGINGLLHVSQISHDRVSDIATVLQPG 307
[2][TOP]
>UniRef100_A7Q8U9 Chromosome chr5 scaffold_64, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7Q8U9_VITVI
Length = 410
Score = 267 bits (683), Expect = 2e-70
Identities = 132/158 (83%), Positives = 151/158 (95%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
VIIGENE+DD+L LSL+SIQ+ LAWERCRQLQAED VVKGK+V ANKGGVVA VEGL+GF
Sbjct: 149 VIIGENEADDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVGANKGGVVALVEGLRGF 208
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLGIGSVVTGSVQ 361
VPFSQIS+K+T EELL+KE+P+KFVEVDEEQSRL+LS+RKA+ADSQ QLGIGSVVTG+VQ
Sbjct: 209 VPFSQISSKTTAEELLDKELPVKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQ 268
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
SLKPYGAFIDIGGI+GLLHVSQISHDR++DI+TVLQPG
Sbjct: 269 SLKPYGAFIDIGGINGLLHVSQISHDRVSDIATVLQPG 306
[3][TOP]
>UniRef100_B9HX66 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9HX66_POPTR
Length = 412
Score = 266 bits (681), Expect = 4e-70
Identities = 131/158 (82%), Positives = 151/158 (95%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
VIIGENE+DD+L LSL+SIQ+ LAWERCRQLQAEDA+VKGK+V N+GGVVA VEGL+GF
Sbjct: 151 VIIGENEADDSLILSLRSIQYELAWERCRQLQAEDAIVKGKVVGGNRGGVVAVVEGLQGF 210
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLGIGSVVTGSVQ 361
VPFSQIS+KS+ EELL+KE+PLKFV+VDEEQSRL+LS+RKA+ADSQ QLGIGSVVTG+VQ
Sbjct: 211 VPFSQISSKSSAEELLDKEVPLKFVDVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQ 270
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
SLKPYGAFIDIGGI+GLLHVSQISHDR++DISTVLQPG
Sbjct: 271 SLKPYGAFIDIGGINGLLHVSQISHDRVSDISTVLQPG 308
[4][TOP]
>UniRef100_A9PE95 Predicted protein n=1 Tax=Populus trichocarpa RepID=A9PE95_POPTR
Length = 421
Score = 262 bits (670), Expect = 8e-69
Identities = 130/158 (82%), Positives = 148/158 (93%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
VIIGENE+DD+L LSL+SI + LAWERCRQLQAED +VKGK+V NKGG+VA VEGL+GF
Sbjct: 151 VIIGENEADDSLILSLRSIHYELAWERCRQLQAEDVIVKGKVVGGNKGGLVAVVEGLRGF 210
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLGIGSVVTGSVQ 361
VPFSQIS+KST EELL+KE PLKFV+VDEEQSRLILS+RKA+ADSQ QLGIGSVVTG+VQ
Sbjct: 211 VPFSQISSKSTPEELLDKEFPLKFVDVDEEQSRLILSNRKAMADSQAQLGIGSVVTGTVQ 270
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
SLKPYGAFIDIGGI+GLLHVSQISHDR++DI+TVLQPG
Sbjct: 271 SLKPYGAFIDIGGINGLLHVSQISHDRVSDIATVLQPG 308
[5][TOP]
>UniRef100_C6T883 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T883_SOYBN
Length = 412
Score = 260 bits (664), Expect = 4e-68
Identities = 131/158 (82%), Positives = 144/158 (91%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+IIGEN DD+L LSL+S+QF LAWERCRQLQAED VKGKIV NKGGVVAE+EGL+GF
Sbjct: 151 LIIGENSIDDSLVLSLRSLQFDLAWERCRQLQAEDVTVKGKIVGVNKGGVVAELEGLRGF 210
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLGIGSVVTGSVQ 361
VP SQIST S EELL+KE+PLKFVEVDEEQSRL+LS+RKAVA +Q QLGIGSVVTGSVQ
Sbjct: 211 VPLSQISTNSNVEELLDKELPLKFVEVDEEQSRLVLSNRKAVAGNQAQLGIGSVVTGSVQ 270
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
SLKPYGAFIDIGGI+GLLHVSQISHDR+TDISTVLQPG
Sbjct: 271 SLKPYGAFIDIGGINGLLHVSQISHDRVTDISTVLQPG 308
[6][TOP]
>UniRef100_B9RZW3 Tex protein-relatedtranscription accessory protein, putative n=1
Tax=Ricinus communis RepID=B9RZW3_RICCO
Length = 412
Score = 260 bits (664), Expect = 4e-68
Identities = 130/159 (81%), Positives = 150/159 (94%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEG-LKG 178
VIIGENE+DD+L LSL++IQ+ L+WERCRQLQAED +VKGK+V ANKGGVVA VEG L+G
Sbjct: 151 VIIGENEADDSLILSLRAIQYDLSWERCRQLQAEDVIVKGKVVGANKGGVVAIVEGGLRG 210
Query: 179 FVPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLGIGSVVTGSV 358
FVPFSQIS+KST EELLEKE+PLKFV+VDEEQSRL+LS+RKA+ADSQ QLGIGSVV G+V
Sbjct: 211 FVPFSQISSKSTAEELLEKELPLKFVDVDEEQSRLVLSNRKAMADSQAQLGIGSVVIGTV 270
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
QSLKPYGAFIDIGGI+GLLHVSQISHDR++DI+TVLQPG
Sbjct: 271 QSLKPYGAFIDIGGINGLLHVSQISHDRVSDIATVLQPG 309
[7][TOP]
>UniRef100_Q93VC7 Putative uncharacterized protein n=1 Tax=Arabidopsis thaliana
RepID=Q93VC7_ARATH
Length = 416
Score = 259 bits (662), Expect = 7e-68
Identities = 128/158 (81%), Positives = 147/158 (93%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
VIIGENESDD+L LSL++IQ+ LAWERCRQLQAED +VK K++ ANKGG+VA VEGL+GF
Sbjct: 153 VIIGENESDDSLLLSLRNIQYELAWERCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGF 212
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLGIGSVVTGSVQ 361
VPFSQIS+K+ EELLEKEIPLKFVEVDEEQ++L+LS+RKAVADSQ QLGIGSVV G VQ
Sbjct: 213 VPFSQISSKAAAEELLEKEIPLKFVEVDEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQ 272
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
SLKPYGAFIDIGGI+GLLHVSQISHDR++DI+TVLQPG
Sbjct: 273 SLKPYGAFIDIGGINGLLHVSQISHDRVSDIATVLQPG 310
[8][TOP]
>UniRef100_C0Z2U7 AT5G30510 protein n=1 Tax=Arabidopsis thaliana RepID=C0Z2U7_ARATH
Length = 378
Score = 259 bits (662), Expect = 7e-68
Identities = 128/158 (81%), Positives = 147/158 (93%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
VIIGENESDD+L LSL++IQ+ LAWERCRQLQAED +VK K++ ANKGG+VA VEGL+GF
Sbjct: 153 VIIGENESDDSLLLSLRNIQYELAWERCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGF 212
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLGIGSVVTGSVQ 361
VPFSQIS+K+ EELLEKEIPLKFVEVDEEQ++L+LS+RKAVADSQ QLGIGSVV G VQ
Sbjct: 213 VPFSQISSKAAAEELLEKEIPLKFVEVDEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQ 272
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
SLKPYGAFIDIGGI+GLLHVSQISHDR++DI+TVLQPG
Sbjct: 273 SLKPYGAFIDIGGINGLLHVSQISHDRVSDIATVLQPG 310
[9][TOP]
>UniRef100_B3SL74 At5g30510-like protein (Fragment) n=5 Tax=Arabidopsis
RepID=B3SL74_ARALP
Length = 186
Score = 258 bits (658), Expect = 2e-67
Identities = 127/157 (80%), Positives = 146/157 (92%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
IIGENESDD+L LSL++IQ+ LAWERCRQLQAED +VK K++ ANKGG+VA VEGL+GFV
Sbjct: 1 IIGENESDDSLLLSLRNIQYELAWERCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFV 60
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLGIGSVVTGSVQS 364
PFSQIS+K+ EELLEKEIPLKFVEVDEEQ++L+LS+RKAVADSQ QLGIGSVV G VQS
Sbjct: 61 PFSQISSKAAAEELLEKEIPLKFVEVDEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQS 120
Query: 365 LKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
LKPYGAFIDIGGI+GLLHVSQISHDR++DI+TVLQPG
Sbjct: 121 LKPYGAFIDIGGINGLLHVSQISHDRVSDIATVLQPG 157
[10][TOP]
>UniRef100_Q0DSD6 Os03g0315800 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group
RepID=Q0DSD6_ORYSJ
Length = 390
Score = 251 bits (642), Expect = 1e-65
Identities = 125/158 (79%), Positives = 142/158 (89%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+II EN D+TL LSL++IQ LAWERCRQLQAED VV GK++ NKGGVVA VEGLKGF
Sbjct: 132 MIIDENPGDETLILSLQAIQQDLAWERCRQLQAEDVVVTGKVIGGNKGGVVALVEGLKGF 191
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLGIGSVVTGSVQ 361
VPFSQ+S+KST EELL+KE+PLKFVEVDEEQ RL+LS+RKA+ADSQ QLGIGSVV G+V+
Sbjct: 192 VPFSQVSSKSTAEELLDKELPLKFVEVDEEQGRLVLSNRKAMADSQAQLGIGSVVLGTVE 251
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
SLKPYGAFIDIGGI+GLLHVSQISHDR+ DISTVLQPG
Sbjct: 252 SLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPG 289
[11][TOP]
>UniRef100_B9F848 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9F848_ORYSJ
Length = 382
Score = 251 bits (642), Expect = 1e-65
Identities = 125/158 (79%), Positives = 142/158 (89%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+II EN D+TL LSL++IQ LAWERCRQLQAED VV GK++ NKGGVVA VEGLKGF
Sbjct: 124 MIIDENPGDETLILSLQAIQQDLAWERCRQLQAEDVVVTGKVIGGNKGGVVALVEGLKGF 183
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLGIGSVVTGSVQ 361
VPFSQ+S+KST EELL+KE+PLKFVEVDEEQ RL+LS+RKA+ADSQ QLGIGSVV G+V+
Sbjct: 184 VPFSQVSSKSTAEELLDKELPLKFVEVDEEQGRLVLSNRKAMADSQAQLGIGSVVLGTVE 243
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
SLKPYGAFIDIGGI+GLLHVSQISHDR+ DISTVLQPG
Sbjct: 244 SLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPG 281
[12][TOP]
>UniRef100_Q10MB2 30S ribosomal protein S1, chloroplast, putative, expressed n=2
Tax=Oryza sativa RepID=Q10MB2_ORYSJ
Length = 402
Score = 251 bits (642), Expect = 1e-65
Identities = 125/158 (79%), Positives = 142/158 (89%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+II EN D+TL LSL++IQ LAWERCRQLQAED VV GK++ NKGGVVA VEGLKGF
Sbjct: 144 MIIDENPGDETLILSLQAIQQDLAWERCRQLQAEDVVVTGKVIGGNKGGVVALVEGLKGF 203
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLGIGSVVTGSVQ 361
VPFSQ+S+KST EELL+KE+PLKFVEVDEEQ RL+LS+RKA+ADSQ QLGIGSVV G+V+
Sbjct: 204 VPFSQVSSKSTAEELLDKELPLKFVEVDEEQGRLVLSNRKAMADSQAQLGIGSVVLGTVE 263
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
SLKPYGAFIDIGGI+GLLHVSQISHDR+ DISTVLQPG
Sbjct: 264 SLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPG 301
[13][TOP]
>UniRef100_B4FUZ5 30S ribosomal protein S1 n=1 Tax=Zea mays RepID=B4FUZ5_MAIZE
Length = 401
Score = 250 bits (638), Expect = 4e-65
Identities = 124/158 (78%), Positives = 142/158 (89%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+II EN D+TL LSL++IQ LAWERCRQLQAED VV GK++ NKGGVVA V+GLKGF
Sbjct: 145 MIIDENPGDETLILSLQAIQQELAWERCRQLQAEDVVVTGKVIGGNKGGVVALVDGLKGF 204
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLGIGSVVTGSVQ 361
VPFSQ+S+K+T EELLEKE+PLKFVEVDEEQ RL+LS+RKA+ADSQ QLGIGSVV G+V+
Sbjct: 205 VPFSQVSSKTTAEELLEKELPLKFVEVDEEQGRLVLSNRKAMADSQAQLGIGSVVLGTVE 264
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
SLKPYGAFIDIGGI+GLLHVSQISHDR+ DISTVLQPG
Sbjct: 265 SLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPG 302
[14][TOP]
>UniRef100_C5X1V3 Putative uncharacterized protein Sb01g037100 n=1 Tax=Sorghum
bicolor RepID=C5X1V3_SORBI
Length = 400
Score = 249 bits (635), Expect = 9e-65
Identities = 123/158 (77%), Positives = 142/158 (89%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+II EN D+TL LSL++IQ LAWERCRQLQAED VV GK++ NKGGVVA VEGLKGF
Sbjct: 145 MIIDENPGDETLILSLQAIQQELAWERCRQLQAEDVVVTGKVIGGNKGGVVALVEGLKGF 204
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLGIGSVVTGSVQ 361
VPFSQ+S+K+T EELL+KE+PLK+VEVDEEQ RL+LS+RKA+ADSQ QLGIGSVV G+V+
Sbjct: 205 VPFSQVSSKTTAEELLDKELPLKYVEVDEEQGRLVLSNRKAMADSQAQLGIGSVVLGTVE 264
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
SLKPYGAFIDIGGI+GLLHVSQISHDR+ DISTVLQPG
Sbjct: 265 SLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPG 302
[15][TOP]
>UniRef100_A9NYG1 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NYG1_PICSI
Length = 425
Score = 226 bits (575), Expect = 8e-58
Identities = 108/158 (68%), Positives = 137/158 (86%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ E++++ + LSL+ IQ LAWERCRQLQ ED VVKGK+++ANKGG+ VE L+GF
Sbjct: 166 MVLREDDTNSRMILSLQKIQCDLAWERCRQLQTEDVVVKGKVLSANKGGLNVLVECLRGF 225
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLGIGSVVTGSVQ 361
VPFSQISTK EEL+ KEIPLKF+EVDEEQ+RL+LS+RKA+ADSQ QLGIGSVV G+VQ
Sbjct: 226 VPFSQISTKINIEELVNKEIPLKFMEVDEEQTRLVLSNRKAMADSQAQLGIGSVVLGTVQ 285
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYGAF+D+GGI+GLLHVSQISHDR+ D+ T+LQPG
Sbjct: 286 TIKPYGAFVDLGGINGLLHVSQISHDRVADVGTILQPG 323
[16][TOP]
>UniRef100_Q10MB3 30S ribosomal protein S1, chloroplast, putative, expressed n=1
Tax=Oryza sativa Japonica Group RepID=Q10MB3_ORYSJ
Length = 380
Score = 206 bits (525), Expect = 5e-52
Identities = 108/148 (72%), Positives = 124/148 (83%), Gaps = 1/148 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+II EN D+TL LSL++IQ LAWERCRQLQAED VV GK++ NKGGVVA VEGLKGF
Sbjct: 144 MIIDENPGDETLILSLQAIQQDLAWERCRQLQAEDVVVTGKVIGGNKGGVVALVEGLKGF 203
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLGIGSVVTGSVQ 361
VPFSQ+S+KST EELL+KE+PLKFVEVDEEQ RL+LS+RKA+ADSQ QLGIGSVV G+V+
Sbjct: 204 VPFSQVSSKSTAEELLDKELPLKFVEVDEEQGRLVLSNRKAMADSQAQLGIGSVVLGTVE 263
Query: 362 SLKPYGAFIDIGGISG-LLHVSQISHDR 442
SLKPYGAFIDI G L V +SHDR
Sbjct: 264 SLKPYGAFIDIVLQPGDTLKVMILSHDR 291
[17][TOP]
>UniRef100_A9S0R6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9S0R6_PHYPA
Length = 389
Score = 205 bits (521), Expect = 1e-51
Identities = 103/161 (63%), Positives = 130/161 (80%), Gaps = 3/161 (1%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
VI+ +++ + + LSL+ IQ L WERC QL A+D VV+G I+++N GG V VEGL+GF
Sbjct: 156 VIVKDDDDNGRMILSLRKIQHELCWERCAQLLADDVVVRGTILSSNSGGFVVAVEGLRGF 215
Query: 182 VPFSQIS--TKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAV-ADSQGQLGIGSVVTG 352
VPFSQIS T+S EELL KEIPLKF+EVDEE++RL+LS+RKA A+SQ GIGSVV G
Sbjct: 216 VPFSQISAVTQSNPEELLNKEIPLKFLEVDEERTRLVLSNRKATFAESQSAFGIGSVVVG 275
Query: 353 SVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+VQ++KPYGAFIDIGG+SGLLH+SQISHDR+T + TVL PG
Sbjct: 276 TVQTVKPYGAFIDIGGVSGLLHISQISHDRLTSVETVLSPG 316
[18][TOP]
>UniRef100_A9RWH7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RWH7_PHYPA
Length = 397
Score = 202 bits (514), Expect = 9e-51
Identities = 99/162 (61%), Positives = 130/162 (80%), Gaps = 4/162 (2%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
V+I +++ + + LSL+ IQ+ L WERC Q+ A+D VV+G I++ N GG V +VEGL+GF
Sbjct: 151 VVIKDDDDNGRMILSLRKIQYDLCWERCAQMLADDVVVRGTILSHNSGGFVVDVEGLRGF 210
Query: 182 VPFSQISTK---STGEELLEKEIPLKFVEVDEEQSRLILSHRKAV-ADSQGQLGIGSVVT 349
VPFSQ+S + S EELL KEIPLKF+EVDEE++RL+LS+RKA A++Q GIGSVV
Sbjct: 211 VPFSQVSARGAQSNPEELLNKEIPLKFLEVDEERTRLVLSNRKATFAENQSAFGIGSVVV 270
Query: 350 GSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G+VQ++KPYGAFIDIGG+SGLLH+SQISHDR+T + TVL PG
Sbjct: 271 GTVQTVKPYGAFIDIGGVSGLLHISQISHDRLTTVETVLSPG 312
[19][TOP]
>UniRef100_A6N017 30S ribosomal protein S1 (Fragment) n=1 Tax=Oryza sativa Indica
Group RepID=A6N017_ORYSI
Length = 217
Score = 195 bits (495), Expect = 2e-48
Identities = 96/116 (82%), Positives = 108/116 (93%)
Frame = +2
Query: 128 VNANKGGVVAEVEGLKGFVPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAV 307
+ NKGGVVA VEGLKGFVPFSQ+S+KST EELL+KE+PLKFVEVDEEQ RL+LS+RKA+
Sbjct: 1 IGGNKGGVVALVEGLKGFVPFSQVSSKSTAEELLDKELPLKFVEVDEEQGRLVLSNRKAM 60
Query: 308 ADSQGQLGIGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
ADSQ QLGIGSVV G+V+SLKPYGAFIDIGGI+GLLHVSQISHDR+ DISTVLQPG
Sbjct: 61 ADSQAQLGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPG 116
[20][TOP]
>UniRef100_Q10VU3 SSU ribosomal protein S1P n=1 Tax=Trichodesmium erythraeum IMS101
RepID=Q10VU3_TRIEI
Length = 390
Score = 175 bits (443), Expect = 2e-42
Identities = 85/157 (54%), Positives = 120/157 (76%), Gaps = 1/157 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ ENE D L LS++ I++ AWER RQLQAEDA V+ ++ N+GG + +EGL+GF
Sbjct: 86 ILTDENE-DGQLTLSIRRIEYMRAWERVRQLQAEDATVRSQVFATNRGGALVRIEGLRGF 144
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSV 358
+P S IST+ E+LL +E+PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V
Sbjct: 145 IPGSHISTRKPKEDLLNEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGAV 204
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQ 469
+ +KPYGAFIDIGG+SGLLH+S+ISHD I S+VL+
Sbjct: 205 RGIKPYGAFIDIGGVSGLLHISEISHDHIETPSSVLK 241
[21][TOP]
>UniRef100_B7FJ43 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=B7FJ43_MEDTR
Length = 186
Score = 172 bits (435), Expect = 1e-41
Identities = 84/106 (79%), Positives = 97/106 (91%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
VI+G+NE DD + LSL+ IQF LAWERCRQLQAEDAVVKGKI++ANKGGVVAEVEGLKGF
Sbjct: 79 VIVGQNEIDDGMILSLRDIQFELAWERCRQLQAEDAVVKGKIIDANKGGVVAEVEGLKGF 138
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ 319
VPFSQ+STKS GEE++E E+PLKFVEVD+EQ+RL+LSHRKAVA Q
Sbjct: 139 VPFSQMSTKSPGEEIIEFEVPLKFVEVDQEQARLVLSHRKAVAGIQ 184
[22][TOP]
>UniRef100_B0BZ86 30S ribosomal protein S1 n=1 Tax=Acaryochloris marina MBIC11017
RepID=B0BZ86_ACAM1
Length = 325
Score = 171 bits (433), Expect = 2e-41
Identities = 79/148 (53%), Positives = 113/148 (76%), Gaps = 1/148 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ + D L LS++ I++ AWER RQLQ EDA V+ + N+GG + +EGL+GF+
Sbjct: 86 ILADENEDGQLTLSIRRIEYMRAWERVRQLQTEDATVRSSVFATNRGGALVRIEGLRGFI 145
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST++T E+L+ +E+PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 146 PGSHISTRATKEDLIGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVR 205
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRI 445
+KPYGAFIDIGG+SGLLH+S+ISHD I
Sbjct: 206 GIKPYGAFIDIGGVSGLLHISEISHDHI 233
[23][TOP]
>UniRef100_B8HVN0 RNA binding S1 domain protein n=1 Tax=Cyanothece sp. PCC 7425
RepID=B8HVN0_CYAP4
Length = 321
Score = 171 bits (432), Expect = 3e-41
Identities = 80/148 (54%), Positives = 113/148 (76%), Gaps = 1/148 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ + D L LS++ I++ AWER RQLQAEDA V+ + N+GG + +EGL+GF+
Sbjct: 86 ILADENEDGQLTLSIRRIEYMRAWERVRQLQAEDATVRSAVFATNRGGALVRIEGLRGFI 145
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ T E+L+ +E+PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 146 PGSHISTRVTKEDLVGEELPLKFLEVDEERNRLVLSHRRALVERKMNKLEVGEVVIGTVR 205
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRI 445
+KPYGAFIDIGG+SGLLH+S+ISHD I
Sbjct: 206 GIKPYGAFIDIGGVSGLLHISEISHDHI 233
[24][TOP]
>UniRef100_A0YXU1 30S ribosomal protein S1 n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0YXU1_9CYAN
Length = 414
Score = 170 bits (431), Expect = 4e-41
Identities = 81/149 (54%), Positives = 115/149 (77%), Gaps = 1/149 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ ENE D L LS++ I++ AWER RQLQAEDA V+ ++ N+GG + +EGL+GF
Sbjct: 86 ILTDENE-DGQLTLSIRRIEYMRAWERVRQLQAEDATVRSQVFATNRGGALVRIEGLRGF 144
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSV 358
+P S IST+ EEL+ +E+PLKF+EVDE+++RL+LSHR+A+ + +L +G VV G+V
Sbjct: 145 IPGSHISTRKPKEELVSEELPLKFLEVDEDRNRLVLSHRRALVERKMNRLEVGEVVIGTV 204
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRI 445
+ +KPYGAFIDIGG+SGLLH+S+ISHD I
Sbjct: 205 RGIKPYGAFIDIGGVSGLLHISEISHDHI 233
[25][TOP]
>UniRef100_C7QTB9 RNA binding S1 domain protein n=2 Tax=Cyanothece RepID=C7QTB9_CYAP0
Length = 331
Score = 170 bits (430), Expect = 5e-41
Identities = 82/149 (55%), Positives = 113/149 (75%), Gaps = 1/149 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ ENE D L LS++ I++ AWER RQLQAEDA V+ + N+GG + +EGL+GF
Sbjct: 87 ILTDENE-DGQLTLSIRRIEYMRAWERVRQLQAEDATVRSNVFATNRGGALVRIEGLRGF 145
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSV 358
+P S IST+ E+L+ +E+PLKF+EVDEE++RL+LSHR+A+ + L +G VV GSV
Sbjct: 146 IPGSHISTREAKEDLVGEELPLKFLEVDEERNRLVLSHRRALVERKMNGLEVGQVVVGSV 205
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRI 445
+ +KPYGAFIDIGG+SGLLH+S+ISHD I
Sbjct: 206 RGIKPYGAFIDIGGVSGLLHISEISHDHI 234
[26][TOP]
>UniRef100_B5VXQ7 RNA binding S1 domain protein n=1 Tax=Arthrospira maxima CS-328
RepID=B5VXQ7_SPIMA
Length = 375
Score = 170 bits (430), Expect = 5e-41
Identities = 81/149 (54%), Positives = 115/149 (77%), Gaps = 1/149 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ ENE D L LS++ I++ AWER RQLQAEDA V+ ++ N+GG + +EGL+GF
Sbjct: 86 ILTDENE-DGQLTLSIRRIEYMRAWERVRQLQAEDATVRSQVFATNRGGALVRIEGLRGF 144
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSV 358
+P S IST+ EEL+ +E+PLKF+EVDE+++RL+LSHR+A+ + +L +G VV G+V
Sbjct: 145 IPGSHISTRKPKEELVAEELPLKFLEVDEDRNRLVLSHRRALVERKMNRLEVGEVVIGTV 204
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRI 445
+ +KPYGAFIDIGG+SGLLH+S+ISHD I
Sbjct: 205 RGIKPYGAFIDIGGVSGLLHISEISHDHI 233
[27][TOP]
>UniRef100_Q8DHB3 30S ribosomal protein S1 n=1 Tax=Thermosynechococcus elongatus BP-1
RepID=Q8DHB3_THEEB
Length = 330
Score = 169 bits (429), Expect = 7e-41
Identities = 79/148 (53%), Positives = 113/148 (76%), Gaps = 1/148 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ + + L LS++ I++ AWER RQLQAEDA V+ ++ N+GG + +EGL+GF+
Sbjct: 85 ILADENEEGQLTLSIRRIEYMRAWERVRQLQAEDATVRSQVFATNRGGALVRIEGLRGFI 144
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ EEL+ +E+PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 145 PGSHISTRVNKEELVGEELPLKFLEVDEERNRLVLSHRRALVERKMNKLEVGEVVVGTVR 204
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRI 445
+KPYGAFIDIGG+SGLLH+S+ISHD I
Sbjct: 205 GIKPYGAFIDIGGVSGLLHISEISHDHI 232
[28][TOP]
>UniRef100_B1XJ16 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. PCC 7002
RepID=B1XJ16_SYNP2
Length = 326
Score = 169 bits (429), Expect = 7e-41
Identities = 83/157 (52%), Positives = 116/157 (73%), Gaps = 1/157 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ ENE D L LS++ I++ AWER RQLQAEDA V+ + N+GG + +EGL+GF
Sbjct: 86 ILTDENE-DGQLTLSIRRIEYMRAWERVRQLQAEDATVRSLVFATNRGGALVRIEGLRGF 144
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSV 358
+P S IST+ E+L+ +E+PLKF+EVDE+++RL+LSHR+A+ + L +G VV GSV
Sbjct: 145 IPGSHISTRQAKEDLVGQELPLKFLEVDEDRNRLVLSHRRALVERKMNGLEVGEVVVGSV 204
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQ 469
+ +KPYGAFIDIGG+SGLLH+S+ISHD I +V Q
Sbjct: 205 RGIKPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFQ 241
[29][TOP]
>UniRef100_B1X069 30S ribosomal protein S1 n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1X069_CYAA5
Length = 359
Score = 169 bits (429), Expect = 7e-41
Identities = 82/149 (55%), Positives = 113/149 (75%), Gaps = 1/149 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ ENE D L LS++ I++ AWER RQLQAEDA V+ + N+GG + +EGL+GF
Sbjct: 109 ILTDENE-DGQLTLSIRRIEYMRAWERVRQLQAEDATVRSNVFATNRGGALVRIEGLRGF 167
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSV 358
+P S IST+ E+L+ +E+PLKF+EVDEE++RL+LSHR+A+ + L +G VV GSV
Sbjct: 168 IPGSHISTREAKEDLVGEELPLKFLEVDEERNRLVLSHRRALVERKMNGLEVGQVVIGSV 227
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRI 445
+ +KPYGAFIDIGG+SGLLH+S+ISHD I
Sbjct: 228 RGIKPYGAFIDIGGVSGLLHISEISHDHI 256
[30][TOP]
>UniRef100_A3ITQ5 30S ribosomal protein S1 n=1 Tax=Cyanothece sp. CCY0110
RepID=A3ITQ5_9CHRO
Length = 365
Score = 169 bits (429), Expect = 7e-41
Identities = 82/149 (55%), Positives = 113/149 (75%), Gaps = 1/149 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ ENE D L LS++ I++ AWER RQLQAEDA V+ + N+GG + +EGL+GF
Sbjct: 115 ILTDENE-DGQLTLSIRRIEYMRAWERVRQLQAEDATVRSNVFATNRGGALVRIEGLRGF 173
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSV 358
+P S IST+ E+L+ +E+PLKF+EVDEE++RL+LSHR+A+ + L +G VV GSV
Sbjct: 174 IPGSHISTREAKEDLVGEELPLKFLEVDEERNRLVLSHRRALVERKMNGLEVGQVVIGSV 233
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRI 445
+ +KPYGAFIDIGG+SGLLH+S+ISHD I
Sbjct: 234 RGIKPYGAFIDIGGVSGLLHISEISHDHI 262
[31][TOP]
>UniRef100_B0JTB0 30S ribosomal protein S1 n=1 Tax=Microcystis aeruginosa NIES-843
RepID=B0JTB0_MICAN
Length = 330
Score = 168 bits (426), Expect = 2e-40
Identities = 82/155 (52%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ ENE D L LS++ I++ AWER RQLQ EDA V+ + N+GG + +EGL+GF
Sbjct: 86 ILTDENE-DGQLTLSIRRIEYMRAWERVRQLQKEDATVRSNVFATNRGGALVRIEGLRGF 144
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSV 358
+P S IST+ E+L+ +E+PLKF+EVDE+++RL+LSHR+A+ + L +G VV GSV
Sbjct: 145 IPGSHISTREAKEDLVGQELPLKFLEVDEDRNRLVLSHRRALVERKMNGLAVGQVVIGSV 204
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTV 463
+ +KPYGAFIDIGG+SGLLH+S+ISHD I TV
Sbjct: 205 RGIKPYGAFIDIGGVSGLLHISEISHDHIDTPHTV 239
[32][TOP]
>UniRef100_A8YI09 Genome sequencing data, contig C316 n=1 Tax=Microcystis aeruginosa
PCC 7806 RepID=A8YI09_MICAE
Length = 330
Score = 168 bits (426), Expect = 2e-40
Identities = 82/155 (52%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ ENE D L LS++ I++ AWER RQLQ EDA V+ + N+GG + +EGL+GF
Sbjct: 86 ILTDENE-DGQLTLSIRRIEYMRAWERVRQLQKEDATVRSNVFATNRGGALVRIEGLRGF 144
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSV 358
+P S IST+ E+L+ +E+PLKF+EVDE+++RL+LSHR+A+ + L +G VV GSV
Sbjct: 145 IPGSHISTREAKEDLVGQELPLKFLEVDEDRNRLVLSHRRALVERKMNGLAVGQVVIGSV 204
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTV 463
+ +KPYGAFIDIGG+SGLLH+S+ISHD I TV
Sbjct: 205 RGIKPYGAFIDIGGVSGLLHISEISHDHIDTPHTV 239
[33][TOP]
>UniRef100_A1BQM4 Chloroplast ribosomal protein S1 (Fragment) n=1 Tax=Cucumis sativus
RepID=A1BQM4_CUCSA
Length = 99
Score = 168 bits (426), Expect = 2e-40
Identities = 85/98 (86%), Positives = 93/98 (94%)
Frame = +2
Query: 110 VVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLIL 289
VVKGK+V+ANKGGVVA VEGL+GFVPFSQISTKS EELL KE+PLKFVEVDEEQSRL+L
Sbjct: 2 VVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVDEEQSRLVL 61
Query: 290 SHRKAVADSQGQLGIGSVVTGSVQSLKPYGAFIDIGGI 403
S+RKA+ADSQ QLGIGSVVTG+VQSLKPYGAFIDIGGI
Sbjct: 62 SNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGI 99
[34][TOP]
>UniRef100_Q8Z0G0 30S ribosomal protein S1 n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8Z0G0_ANASP
Length = 343
Score = 168 bits (425), Expect = 2e-40
Identities = 81/149 (54%), Positives = 114/149 (76%), Gaps = 1/149 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ ENE D L LS++ I++ AWER RQLQAEDA V+ + N+GG + +EGL+GF
Sbjct: 86 ILTDENE-DGQLTLSIRRIEYMRAWERVRQLQAEDATVRSGVFATNRGGALVRIEGLRGF 144
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSV 358
+P S IST+ EEL+ +E+PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V
Sbjct: 145 IPGSHISTRKPKEELVGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTV 204
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRI 445
+ +KPYGAFIDIGG+SGLLH+S+ISH+ I
Sbjct: 205 RGIKPYGAFIDIGGVSGLLHISEISHEHI 233
[35][TOP]
>UniRef100_Q3MD08 SSU ribosomal protein S1P n=1 Tax=Anabaena variabilis ATCC 29413
RepID=Q3MD08_ANAVT
Length = 343
Score = 168 bits (425), Expect = 2e-40
Identities = 81/149 (54%), Positives = 114/149 (76%), Gaps = 1/149 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ ENE D L LS++ I++ AWER RQLQAEDA V+ + N+GG + +EGL+GF
Sbjct: 86 ILTDENE-DGQLTLSIRRIEYMRAWERVRQLQAEDATVRSGVFATNRGGALVRIEGLRGF 144
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSV 358
+P S IST+ EEL+ +E+PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V
Sbjct: 145 IPGSHISTRKPKEELVGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTV 204
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRI 445
+ +KPYGAFIDIGG+SGLLH+S+ISH+ I
Sbjct: 205 RGIKPYGAFIDIGGVSGLLHISEISHEHI 233
[36][TOP]
>UniRef100_B2J9K3 RNA binding S1 domain protein n=1 Tax=Nostoc punctiforme PCC 73102
RepID=B2J9K3_NOSP7
Length = 375
Score = 168 bits (425), Expect = 2e-40
Identities = 81/149 (54%), Positives = 114/149 (76%), Gaps = 1/149 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ ENE D L LS++ I++ AWER RQLQAEDA V+ + N+GG + +EGL+GF
Sbjct: 86 ILTDENE-DGQLTLSIRRIEYMRAWERVRQLQAEDATVRSGVFATNRGGALVRIEGLRGF 144
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSV 358
+P S IST+ EEL+ +E+PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V
Sbjct: 145 IPGSHISTRKPKEELVGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTV 204
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRI 445
+ +KPYGAFIDIGG+SGLLH+S+ISH+ I
Sbjct: 205 RGIKPYGAFIDIGGVSGLLHISEISHEHI 233
[37][TOP]
>UniRef100_Q4C2K3 RNA binding S1 n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4C2K3_CROWT
Length = 345
Score = 168 bits (425), Expect = 2e-40
Identities = 81/149 (54%), Positives = 113/149 (75%), Gaps = 1/149 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ ENE D L LS++ I++ AWER RQLQAEDA V+ + N+GG + +EGL+GF
Sbjct: 86 ILTDENE-DGQLTLSIRRIEYMRAWERVRQLQAEDATVRSDVFATNRGGALVRIEGLRGF 144
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSV 358
+P S IST+ E+L+ +++PLKF+EVDEE++RL+LSHR+A+ + L +G VV GSV
Sbjct: 145 IPGSHISTREAKEDLVGEQLPLKFLEVDEERNRLVLSHRRALVERKMNGLEVGQVVIGSV 204
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRI 445
+ +KPYGAFIDIGG+SGLLH+S+ISHD I
Sbjct: 205 RGIKPYGAFIDIGGVSGLLHISEISHDHI 233
[38][TOP]
>UniRef100_B9YLF3 RNA binding S1 domain protein n=1 Tax='Nostoc azollae' 0708
RepID=B9YLF3_ANAAZ
Length = 341
Score = 168 bits (425), Expect = 2e-40
Identities = 81/149 (54%), Positives = 114/149 (76%), Gaps = 1/149 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ ENE D L LS++ I++ AWER RQLQAEDA V+ + N+GG + +EGL+GF
Sbjct: 86 ILTDENE-DGQLTLSIRRIEYMRAWERVRQLQAEDATVRSGVFATNRGGALVRIEGLRGF 144
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSV 358
+P S IST+ EEL+ +E+PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V
Sbjct: 145 IPGSHISTRKPKEELVGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTV 204
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRI 445
+ +KPYGAFIDIGG+SGLLH+S+ISH+ I
Sbjct: 205 RGIKPYGAFIDIGGVSGLLHISEISHEHI 233
[39][TOP]
>UniRef100_A0ZA65 30S ribosomal protein S1 n=1 Tax=Nodularia spumigena CCY9414
RepID=A0ZA65_NODSP
Length = 383
Score = 168 bits (425), Expect = 2e-40
Identities = 81/149 (54%), Positives = 114/149 (76%), Gaps = 1/149 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ ENE D L LS++ I++ AWER RQLQAEDA V+ + N+GG + +EGL+GF
Sbjct: 86 ILTDENE-DGQLTLSIRRIEYMRAWERVRQLQAEDATVRSGVFATNRGGALVRIEGLRGF 144
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSV 358
+P S IST+ EEL+ +E+PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V
Sbjct: 145 IPGSHISTRKPKEELVGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTV 204
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRI 445
+ +KPYGAFIDIGG+SGLLH+S+ISH+ I
Sbjct: 205 RGIKPYGAFIDIGGVSGLLHISEISHEHI 233
[40][TOP]
>UniRef100_P46228 30S ribosomal protein S1 n=2 Tax=Synechococcus elongatus
RepID=RS1_SYNP6
Length = 307
Score = 168 bits (425), Expect = 2e-40
Identities = 77/148 (52%), Positives = 112/148 (75%), Gaps = 1/148 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ + D L LS++ I++ AWER RQLQ EDA V+ ++ N+GG + +EGL+GF+
Sbjct: 86 ILSDENEDGQLTLSIRRIEYMRAWERVRQLQTEDATVRSEVFATNRGGALVRIEGLRGFI 145
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ E+L+ +E+PLKF+EVDE+++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 146 PGSHISTRKAKEDLVGEELPLKFLEVDEDRNRLVLSHRRALVERKMNRLEVGEVVVGAVR 205
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRI 445
+KPYGAFIDIGG+SGLLH+S+ISHD I
Sbjct: 206 GIKPYGAFIDIGGVSGLLHISEISHDHI 233
[41][TOP]
>UniRef100_B1X539 30S ribosomal protein S1 n=1 Tax=Paulinella chromatophora
RepID=B1X539_PAUCH
Length = 330
Score = 167 bits (424), Expect = 3e-40
Identities = 81/155 (52%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 103 ILSEENEDGQLTLSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 162
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ EEL+ +PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 163 PGSHISTRKAKEELVSDFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVR 222
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I TVL
Sbjct: 223 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHTVL 257
[42][TOP]
>UniRef100_B5IPJ0 Ribosomal protein S1 n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5IPJ0_9CHRO
Length = 351
Score = 167 bits (423), Expect = 3e-40
Identities = 81/155 (52%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 126 ILSEENEDGQLTLSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 185
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ EEL+ +PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 186 PGSHISTRKAKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVLGTVR 245
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I TVL
Sbjct: 246 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHTVL 280
[43][TOP]
>UniRef100_B4VZV8 S1 RNA binding domain protein n=1 Tax=Microcoleus chthonoplastes
PCC 7420 RepID=B4VZV8_9CYAN
Length = 323
Score = 167 bits (423), Expect = 3e-40
Identities = 80/149 (53%), Positives = 113/149 (75%), Gaps = 1/149 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ ENE D L LS++ I++ AWER RQLQ EDA V+ + N+GG + +EGL+GF
Sbjct: 86 ILTDENE-DGQLTLSIRRIEYMRAWERVRQLQTEDATVRSLVFATNRGGALVRIEGLRGF 144
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSV 358
+P S IST+ E+L+ +E+PLKF+EVDE+++RL+LSHR+A+ + +L +G VV GSV
Sbjct: 145 IPGSHISTRKPKEDLVGEELPLKFLEVDEDRNRLVLSHRRALVERKMNRLEVGEVVVGSV 204
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRI 445
+ +KPYGAFIDIGG+SGLLH+S+ISHD I
Sbjct: 205 RGIKPYGAFIDIGGVSGLLHISEISHDHI 233
[44][TOP]
>UniRef100_Q7VDM5 Ribosomal protein S1 n=1 Tax=Prochlorococcus marinus
RepID=Q7VDM5_PROMA
Length = 367
Score = 167 bits (422), Expect = 4e-40
Identities = 80/155 (51%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 141 IMSEENEDGQLSLSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 200
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ EEL+ + +PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 201 PGSHISTRKAKEELVAEYLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGAVR 260
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I +VL
Sbjct: 261 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHSVL 295
[45][TOP]
>UniRef100_Q2JJ89 Ribosomal protein S1 n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13)
RepID=Q2JJ89_SYNJB
Length = 322
Score = 166 bits (421), Expect = 6e-40
Identities = 78/148 (52%), Positives = 111/148 (75%), Gaps = 1/148 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E + L LS++ I++ AWER RQLQ EDA V+ I N+GG + +EGL+GF+
Sbjct: 84 ILTEENEEGQLTLSIRRIEYMRAWERVRQLQKEDATVRSTIFATNRGGALVRIEGLRGFI 143
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ EEL+ +E+PLKF+EVDE+++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 144 PGSHISTRKPKEELVGEELPLKFLEVDEDRNRLVLSHRRALVERKMNKLEVGEVVVGTVR 203
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRI 445
+KPYGAFIDIGG+SGLLH+S+ISHD +
Sbjct: 204 GIKPYGAFIDIGGVSGLLHISEISHDHV 231
[46][TOP]
>UniRef100_A9BDW8 30S ribosomal protein S1-like protein A n=1 Tax=Prochlorococcus
marinus str. MIT 9211 RepID=A9BDW8_PROM4
Length = 371
Score = 166 bits (421), Expect = 6e-40
Identities = 80/155 (51%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 145 IMSEENEDGQLSLSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 204
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ EEL+ + +PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 205 PGSHISTRKAKEELVAEFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGAVR 264
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I +VL
Sbjct: 265 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHSVL 299
[47][TOP]
>UniRef100_A5GR09 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. RCC307
RepID=A5GR09_SYNR3
Length = 367
Score = 166 bits (420), Expect = 8e-40
Identities = 80/155 (51%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 143 ILSEENEDGQLSLSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 202
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ EEL+ + +PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 203 PGSHISTRKPKEELVAEFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVLGTVR 262
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I +VL
Sbjct: 263 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHSVL 297
[48][TOP]
>UniRef100_B7KFG6 RNA binding S1 domain protein n=1 Tax=Cyanothece sp. PCC 7424
RepID=B7KFG6_CYAP7
Length = 328
Score = 166 bits (419), Expect = 1e-39
Identities = 79/149 (53%), Positives = 112/149 (75%), Gaps = 1/149 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ ENE D L LS++ I++ AWER RQLQ EDA V+ + N+GG + +EGL+GF
Sbjct: 87 ILTDENE-DGQLTLSIRRIEYMRAWERVRQLQTEDATVRSSVFATNRGGALVRIEGLRGF 145
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSV 358
+P S IST+ E+L+ +++PLKF+EVDE+++RL+LSHR+A+ + L +G VV GSV
Sbjct: 146 IPGSHISTREAKEDLVGQDLPLKFLEVDEDRNRLVLSHRRALVERKMNGLEVGQVVIGSV 205
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRI 445
+ +KPYGAFIDIGG+SGLLH+S+ISHD I
Sbjct: 206 RGIKPYGAFIDIGGVSGLLHISEISHDHI 234
[49][TOP]
>UniRef100_A5GJ26 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GJ26_SYNPW
Length = 367
Score = 166 bits (419), Expect = 1e-39
Identities = 80/155 (51%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 141 IMSEENEDGQLSLSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 200
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ EEL+ +PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 201 PGSHISTRKAKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGTVR 260
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I +VL
Sbjct: 261 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHSVL 295
[50][TOP]
>UniRef100_Q3AWE8 SSU ribosomal protein S1P n=1 Tax=Synechococcus sp. CC9902
RepID=Q3AWE8_SYNS9
Length = 367
Score = 165 bits (418), Expect = 1e-39
Identities = 80/155 (51%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 141 IMSEENEDGQLALSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 200
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ EEL+ +PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 201 PGSHISTRKPKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGTVR 260
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I +VL
Sbjct: 261 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHSVL 295
[51][TOP]
>UniRef100_Q3AME0 RNA binding S1 n=1 Tax=Synechococcus sp. CC9605 RepID=Q3AME0_SYNSC
Length = 386
Score = 165 bits (418), Expect = 1e-39
Identities = 80/155 (51%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 160 IMSEENEDGQLALSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 219
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ EEL+ +PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 220 PGSHISTRKPKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGTVR 279
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I +VL
Sbjct: 280 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHSVL 314
[52][TOP]
>UniRef100_Q05Z68 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. BL107
RepID=Q05Z68_9SYNE
Length = 367
Score = 165 bits (418), Expect = 1e-39
Identities = 80/155 (51%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 141 IMSEENEDGQLALSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 200
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ EEL+ +PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 201 PGSHISTRKPKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGTVR 260
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I +VL
Sbjct: 261 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHSVL 295
[53][TOP]
>UniRef100_D0CJU6 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CJU6_9SYNE
Length = 363
Score = 165 bits (418), Expect = 1e-39
Identities = 80/155 (51%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 137 IMSEENEDGQLALSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 196
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ EEL+ +PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 197 PGSHISTRKPKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGTVR 256
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I +VL
Sbjct: 257 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHSVL 291
[54][TOP]
>UniRef100_A4CSD5 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. WH 7805
RepID=A4CSD5_SYNPV
Length = 368
Score = 165 bits (418), Expect = 1e-39
Identities = 80/155 (51%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 142 IMSEENEDGQLSLSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 201
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ EEL+ +PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 202 PGSHISTRKPKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGTVR 261
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I +VL
Sbjct: 262 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHSVL 296
[55][TOP]
>UniRef100_A3YUT0 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. WH 5701
RepID=A3YUT0_9SYNE
Length = 361
Score = 165 bits (418), Expect = 1e-39
Identities = 80/155 (51%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 136 IMSEENEDGQLSLSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 195
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ E+L+ +PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 196 PGSHISTRKPKEDLVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVR 255
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I TVL
Sbjct: 256 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHTVL 290
[56][TOP]
>UniRef100_Q7V5A4 30S ribosomal protein S1, homolog A n=1 Tax=Prochlorococcus marinus
str. MIT 9313 RepID=Q7V5A4_PROMM
Length = 367
Score = 165 bits (417), Expect = 2e-39
Identities = 80/155 (51%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 141 IMSEENEDGQLSLSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 200
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ EEL+ +PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 201 PGSHISTRKPKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGAVR 260
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I +VL
Sbjct: 261 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHSVL 295
[57][TOP]
>UniRef100_Q7U4S8 30S ribosomal protein S1, homolog A n=1 Tax=Synechococcus sp. WH
8102 RepID=Q7U4S8_SYNPX
Length = 367
Score = 165 bits (417), Expect = 2e-39
Identities = 80/155 (51%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 141 IMSEENEDGQLALSVRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 200
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ EEL+ +PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 201 PGSHISTRKPKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGTVR 260
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I +VL
Sbjct: 261 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHSVL 295
[58][TOP]
>UniRef100_Q7NLY2 30S ribosomal protein S1 n=1 Tax=Gloeobacter violaceus
RepID=Q7NLY2_GLOVI
Length = 320
Score = 165 bits (417), Expect = 2e-39
Identities = 79/158 (50%), Positives = 113/158 (71%), Gaps = 1/158 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ + + L LS++ I++ AWER R+LQ ED V+ KI N+GG + +EGL+GF+
Sbjct: 88 ILSDENEEGQLTLSIRRIEYMKAWERVRKLQTEDQTVRAKIFAVNRGGALVRIEGLRGFI 147
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSVQ 361
P S +ST+ EEL+ +E+PLKF+EVDEE++RL+LSHR+A+ + + +L G VV G V+
Sbjct: 148 PGSHLSTREPKEELIGEELPLKFLEVDEERNRLVLSHRRALVERRMNKLEAGQVVIGRVR 207
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+KPYGAFIDIGG+SGLLH+S+ISHD I +V G
Sbjct: 208 GIKPYGAFIDIGGVSGLLHISEISHDHIETPHSVFNVG 245
[59][TOP]
>UniRef100_Q46H55 SSU ribosomal protein S1P n=1 Tax=Prochlorococcus marinus str.
NATL2A RepID=Q46H55_PROMT
Length = 369
Score = 165 bits (417), Expect = 2e-39
Identities = 80/155 (51%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 143 IMTEENEDGQLSLSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 202
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ EEL+ +PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 203 PGSHISTRKAKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGAVR 262
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I +VL
Sbjct: 263 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHSVL 297
[60][TOP]
>UniRef100_A2CBU1 30S ribosomal protein S1, protein A n=1 Tax=Prochlorococcus marinus
str. MIT 9303 RepID=A2CBU1_PROM3
Length = 367
Score = 165 bits (417), Expect = 2e-39
Identities = 80/155 (51%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 141 IMSEENEDGQLSLSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 200
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ EEL+ +PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 201 PGSHISTRKPKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGAVR 260
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I +VL
Sbjct: 261 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHSVL 295
[61][TOP]
>UniRef100_A2C0F6 30S ribosomal protein S1, protein A n=1 Tax=Prochlorococcus marinus
str. NATL1A RepID=A2C0F6_PROM1
Length = 369
Score = 165 bits (417), Expect = 2e-39
Identities = 80/155 (51%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 143 IMTEENEDGQLSLSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 202
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ EEL+ +PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 203 PGSHISTRKAKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGAVR 262
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I +VL
Sbjct: 263 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHSVL 297
[62][TOP]
>UniRef100_Q05Q21 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. RS9916
RepID=Q05Q21_9SYNE
Length = 359
Score = 165 bits (417), Expect = 2e-39
Identities = 80/155 (51%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 134 IMSEENEDGQLALSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 193
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ EEL+ +PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 194 PGSHISTRKPKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVR 253
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I +VL
Sbjct: 254 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHSVL 288
[63][TOP]
>UniRef100_A3Z943 RNA binding S1 n=1 Tax=Synechococcus sp. RS9917 RepID=A3Z943_9SYNE
Length = 369
Score = 165 bits (417), Expect = 2e-39
Identities = 80/155 (51%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 144 IMSEENEDGQLALSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 203
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ EEL+ +PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 204 PGSHISTRKPKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVR 263
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I +VL
Sbjct: 264 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHSVL 298
[64][TOP]
>UniRef100_C1MYF2 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MYF2_9CHLO
Length = 343
Score = 165 bits (417), Expect = 2e-39
Identities = 78/159 (49%), Positives = 118/159 (74%), Gaps = 2/159 (1%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
II +++ D L LS++ IQ AW RCR++QA D V ++++ N+GG++ EVE L+GFV
Sbjct: 94 IIRDDDGDGCLTLSVRKIQLEAAWNRCREMQAADEAVSAEVLSVNRGGLLVEVEHLRGFV 153
Query: 185 PFSQISTKSTG-EELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQ-LGIGSVVTGSV 358
P S I+ ++ E+L+ +++P+KF+EVDE+++RL++S+R A G+ LG+G V G V
Sbjct: 154 PQSHIAIRTPNREDLIGQKVPVKFLEVDEDKNRLVMSNRLATDVVSGEGLGVGDVCKGIV 213
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
Q++KPYGAF+D+GG+SGLLH+SQISHDRI + VL PG
Sbjct: 214 QAVKPYGAFVDVGGVSGLLHISQISHDRIVAVENVLSPG 252
[65][TOP]
>UniRef100_Q0ICR5 Ribosomal protein S1 n=1 Tax=Synechococcus sp. CC9311
RepID=Q0ICR5_SYNS3
Length = 305
Score = 164 bits (416), Expect = 2e-39
Identities = 80/155 (51%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 79 IMSEENEDGQLSLSVRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 138
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IST+ EEL+ +PLKF+EVDEE++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 139 PGSHISTRKPKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVR 198
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I +VL
Sbjct: 199 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHSVL 233
[66][TOP]
>UniRef100_P73530 30S ribosomal protein S1 homolog A n=1 Tax=Synechocystis sp. PCC
6803 RepID=RS1A_SYNY3
Length = 328
Score = 164 bits (416), Expect = 2e-39
Identities = 79/149 (53%), Positives = 111/149 (74%), Gaps = 1/149 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ ENE D L LS++ I++ AWER RQLQAEDA V+ + N+GG + +EGL+GF
Sbjct: 85 ILTDENE-DGQLTLSIRRIEYMRAWERVRQLQAEDATVRSNVFATNRGGALVRIEGLRGF 143
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSV 358
+P S IS + E+L+ +++PLKF+EVDEE++RL+LSHR+A+ + L + VV GSV
Sbjct: 144 IPGSHISAREAKEDLVGEDLPLKFLEVDEERNRLVLSHRRALVERKMNGLEVAQVVVGSV 203
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRI 445
+ +KPYGAFIDIGG+SGLLH+S+ISHD I
Sbjct: 204 RGIKPYGAFIDIGGVSGLLHISEISHDHI 232
[67][TOP]
>UniRef100_C1EEV9 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EEV9_9CHLO
Length = 387
Score = 164 bits (415), Expect = 3e-39
Identities = 79/159 (49%), Positives = 116/159 (72%), Gaps = 2/159 (1%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
II +++ D +L LS++ IQ AW RCR++QA D V +++ N+GG++ EVE L+GFV
Sbjct: 141 IIRDDDGDGSLTLSVRKIQLEAAWNRCREMQANDEAVNSVVLSVNRGGLLVEVEHLRGFV 200
Query: 185 PFSQISTKSTG-EELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQ-LGIGSVVTGSV 358
P S I+ + +EL+ + +P+KF+EVDEE++RL++S+R A G+ LG+G V G V
Sbjct: 201 PQSHIAMRVPNRDELIGQSVPVKFLEVDEEKNRLVMSNRLATDVVSGEGLGVGDVCKGVV 260
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
Q++KPYGAF+D+GG+SGLLH+SQISHDRI + VL PG
Sbjct: 261 QAVKPYGAFVDVGGVSGLLHISQISHDRIVAVENVLAPG 299
[68][TOP]
>UniRef100_Q2JS77 Ribosomal protein S1 n=1 Tax=Synechococcus sp. JA-3-3Ab
RepID=Q2JS77_SYNJA
Length = 323
Score = 163 bits (413), Expect = 5e-39
Identities = 76/148 (51%), Positives = 111/148 (75%), Gaps = 1/148 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E + L LS++ I++ AWER RQLQ EDA V+ I N+GG + +EGL+GF+
Sbjct: 85 ILTEENEEGQLTLSIRRIEYMRAWERVRQLQKEDATVRATIFATNRGGALVRIEGLRGFI 144
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSVQ 361
P S IS++ EEL+ +E+PLKF+EVDE+++RL+LSHR+A+ + +L +G VV G+V+
Sbjct: 145 PGSHISSRKPKEELVGEELPLKFLEVDEDRNRLVLSHRRALVERKMNKLEVGEVVVGTVR 204
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRI 445
+KPYGAFIDIGG+SGLLH+S+ISH+ +
Sbjct: 205 GIKPYGAFIDIGGVSGLLHISEISHEHV 232
[69][TOP]
>UniRef100_A2BUU3 30S ribosomal protein S1, protein A n=1 Tax=Prochlorococcus marinus
str. MIT 9515 RepID=A2BUU3_PROM5
Length = 363
Score = 162 bits (411), Expect = 8e-39
Identities = 79/155 (50%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 135 IMSEENEDGQLALSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 194
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSVQ 361
P S IS + E+L + +PLKF+EVDEE++RL+LSHR+A+ + + +L +G VV GSV+
Sbjct: 195 PGSHISARKIKEDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVK 254
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I VL
Sbjct: 255 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHNVL 289
[70][TOP]
>UniRef100_Q7V2Y7 30S ribosomal protein S1, homolog A n=1 Tax=Prochlorococcus marinus
subsp. pastoris str. CCMP1986 RepID=Q7V2Y7_PROMP
Length = 363
Score = 162 bits (410), Expect = 1e-38
Identities = 79/155 (50%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 135 IMSEENEDGQLALSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 194
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSVQ 361
P S IS + E+L + +PLKF+EVDEE++RL+LSHR+A+ + + +L +G VV GSV+
Sbjct: 195 PGSHISARKIKEDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVIGSVK 254
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I VL
Sbjct: 255 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHNVL 289
[71][TOP]
>UniRef100_A4RTM3 Plastid ribosomal protein S1, imported to chloroplast, small
ribosomal subunit n=1 Tax=Ostreococcus lucimarinus
CCE9901 RepID=A4RTM3_OSTLU
Length = 339
Score = 162 bits (410), Expect = 1e-38
Identities = 78/160 (48%), Positives = 118/160 (73%), Gaps = 3/160 (1%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
II ++ + + LS++ ++ AW+RCR+ QA+DA + G +++ N+GG++ EVE L+GFV
Sbjct: 115 IIQDDNGEGCMTLSVRRMELAKAWDRCREAQADDAALTGDVLSVNRGGLLVEVEKLRGFV 174
Query: 185 PFSQISTKSTG-EELLEKEIPLKFVEVDEEQSRLILSHRKA--VADSQGQLGIGSVVTGS 355
P S I ++ EEL+ +++P KF+EVDEE++RL+LSHR A + ++G L +G VV G
Sbjct: 175 PQSHIGVRTLNREELIGQQLPFKFIEVDEEKNRLVLSHRLATDMVSAEG-LEVGDVVEGM 233
Query: 356 VQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
VQ++KPYGAF+D+GG SGLLH+SQISH+RI + VL PG
Sbjct: 234 VQAVKPYGAFVDVGGQSGLLHISQISHERIVAVENVLSPG 273
[72][TOP]
>UniRef100_Q31CL6 SSU ribosomal protein S1P n=1 Tax=Prochlorococcus marinus str. MIT
9312 RepID=Q31CL6_PROM9
Length = 366
Score = 161 bits (408), Expect = 2e-38
Identities = 78/155 (50%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 138 IMSEENEDGQLALSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 197
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSVQ 361
P S IS + ++L + +PLKF+EVDEE++RL+LSHR+A+ + + +L +G VV GSV+
Sbjct: 198 PGSHISARRVKDDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVK 257
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I VL
Sbjct: 258 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHNVL 292
[73][TOP]
>UniRef100_A8G2X3 Ribosomal protein S1 n=1 Tax=Prochlorococcus marinus str. MIT 9215
RepID=A8G2X3_PROM2
Length = 363
Score = 161 bits (408), Expect = 2e-38
Identities = 78/155 (50%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 135 IMSEENEDGQLALSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 194
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSVQ 361
P S IS + ++L + +PLKF+EVDEE++RL+LSHR+A+ + + +L +G VV GSV+
Sbjct: 195 PGSHISARKIKDDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVK 254
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I VL
Sbjct: 255 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHNVL 289
[74][TOP]
>UniRef100_Q1PL50 30S ribosomal protein S1 A n=1 Tax=uncultured Prochlorococcus
marinus clone ASNC2150 RepID=Q1PL50_PROMA
Length = 363
Score = 161 bits (408), Expect = 2e-38
Identities = 78/155 (50%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 135 IMSEENEDGQLALSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 194
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSVQ 361
P S IS + ++L + +PLKF+EVDEE++RL+LSHR+A+ + + +L +G VV GSV+
Sbjct: 195 PGSHISARKIKDDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVK 254
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I VL
Sbjct: 255 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHNVL 289
[75][TOP]
>UniRef100_Q1PKI2 30S ribosomal protein S1 A n=1 Tax=uncultured Prochlorococcus
marinus clone ASNC729 RepID=Q1PKI2_PROMA
Length = 363
Score = 161 bits (408), Expect = 2e-38
Identities = 78/155 (50%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 135 IMSEENEDGQLALSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 194
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSVQ 361
P S IS + ++L + +PLKF+EVDEE++RL+LSHR+A+ + + +L +G VV GSV+
Sbjct: 195 PGSHISARKIKDDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVK 254
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I VL
Sbjct: 255 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHNVL 289
[76][TOP]
>UniRef100_B9P029 30S ribosomal protein S1, protein A n=1 Tax=Prochlorococcus marinus
str. MIT 9202 RepID=B9P029_PROMA
Length = 363
Score = 161 bits (408), Expect = 2e-38
Identities = 78/155 (50%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 135 IMSEENEDGQLALSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 194
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSVQ 361
P S IS + ++L + +PLKF+EVDEE++RL+LSHR+A+ + + +L +G VV GSV+
Sbjct: 195 PGSHISARKIKDDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVK 254
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I VL
Sbjct: 255 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHNVL 289
[77][TOP]
>UniRef100_A2BPB3 30S ribosomal protein S1, protein A n=1 Tax=Prochlorococcus marinus
str. AS9601 RepID=A2BPB3_PROMS
Length = 363
Score = 161 bits (407), Expect = 2e-38
Identities = 78/155 (50%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 135 IMSEENEDGQLALSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 194
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSVQ 361
P S IS + ++L + +PLKF+EVDEE++RL+LSHR+A+ + + +L +G VV GSV+
Sbjct: 195 PGSHISARRIKDDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVK 254
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I VL
Sbjct: 255 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHNVL 289
[78][TOP]
>UniRef100_Q01DM0 30S ribosomal protein S1 (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q01DM0_OSTTA
Length = 250
Score = 160 bits (406), Expect = 3e-38
Identities = 78/160 (48%), Positives = 118/160 (73%), Gaps = 3/160 (1%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
+I ++ + L LS++ ++ AW+RCR+ QAEDA + G++++ N+GG++ EVE L+GFV
Sbjct: 24 VIQDDNGEGCLTLSVRRMELAKAWDRCREAQAEDAALTGEVLSVNRGGLLVEVEKLRGFV 83
Query: 185 PFSQISTKSTG-EELLEKEIPLKFVEVDEEQSRLILSHRKA--VADSQGQLGIGSVVTGS 355
P S I ++ EEL+ +++P KF+EVDEE++RL+LSHR A + ++G L +G VV G
Sbjct: 84 PQSHIGIRTLNREELVGQQLPFKFIEVDEEKNRLVLSHRLATDMVSAEG-LEVGDVVEGM 142
Query: 356 VQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
VQ++KPYGAF+D+GG SGLLH+SQISH+RI + VL G
Sbjct: 143 VQAVKPYGAFVDVGGQSGLLHISQISHERIVAVENVLSAG 182
[79][TOP]
>UniRef100_A3PB35 30S ribosomal protein S1-like protein A n=1 Tax=Prochlorococcus
marinus str. MIT 9301 RepID=A3PB35_PROM0
Length = 363
Score = 160 bits (405), Expect = 4e-38
Identities = 77/155 (49%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ E D L LS++ I++ AWER RQLQ EDA + ++ N+GG + VEGL+GF+
Sbjct: 135 IMSEENEDGQLALSIRRIEYQRAWERVRQLQKEDATIYSEVFATNRGGALVRVEGLRGFI 194
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSVQ 361
P S IS + ++L + +PLKF+EVDEE++RL+LSHR+A+ + + +L +G VV G+V+
Sbjct: 195 PGSHISARKIKDDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGNVK 254
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVL 466
+KPYGAFIDIGG+SGLLH+S+ISH+ I VL
Sbjct: 255 GIKPYGAFIDIGGVSGLLHISEISHEHIETPHNVL 289
[80][TOP]
>UniRef100_B7FU58 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7FU58_PHATR
Length = 284
Score = 151 bits (382), Expect = 2e-35
Identities = 70/158 (44%), Positives = 112/158 (70%), Gaps = 1/158 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
II E + + L +S+K I++ AWE+ + ED +++ K++ N+GG + VEGL+ F+
Sbjct: 78 IISEEDENGQLLVSIKRIEYKKAWEKVLSMAEEDQILEAKVIAVNRGGAICLVEGLRAFL 137
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSVQ 361
P S ++ + E+L+ + LKF+EV++E ++L++S+RKAV + Q L G +V G V+
Sbjct: 138 PGSHLTGQLPDEDLIGNNLQLKFLEVNQETNKLVVSNRKAVVEQQMADLSRGDLVAGMVK 197
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+LKPYGAF+++GG+SGLLH+SQIS+DRI D+ VLQPG
Sbjct: 198 ALKPYGAFVEVGGMSGLLHISQISYDRIDDLEKVLQPG 235
[81][TOP]
>UniRef100_Q7XYL3 Ribosomal protein rpS1 n=1 Tax=Bigelowiella natans
RepID=Q7XYL3_BIGNA
Length = 419
Score = 149 bits (377), Expect = 7e-35
Identities = 71/146 (48%), Positives = 105/146 (71%), Gaps = 1/146 (0%)
Frame = +2
Query: 41 LSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE 220
LS+K + AW R RQ+ D + GKI++ N+GG + EV+ L+GF+PFSQ++T +
Sbjct: 197 LSIKRMLIPTAWTRVRQMAELDVTLSGKILSHNRGGFIIEVDSLQGFLPFSQMATSVDKD 256
Query: 221 ELLEKEIPLKFVEVDEEQSRLILSHRKAVADS-QGQLGIGSVVTGSVQSLKPYGAFIDIG 397
E++ K IP+KF+EVD E RL++S+R+AVA S + +G VV G+V +LKPYGAFI++G
Sbjct: 257 EMIGKVIPVKFLEVDMENQRLVMSNRRAVASSFKKNYKVGDVVVGTVTALKPYGAFINLG 316
Query: 398 GISGLLHVSQISHDRITDISTVLQPG 475
G++GLLH+SQISHD +T + V+ G
Sbjct: 317 GVNGLLHISQISHDHVTSVKDVMDVG 342
[82][TOP]
>UniRef100_B8C8K9 RS1, ribosomal protein 1 (Fragment) n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8C8K9_THAPS
Length = 287
Score = 147 bits (372), Expect = 3e-34
Identities = 70/158 (44%), Positives = 113/158 (71%), Gaps = 1/158 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
II E + + L +S++ IQ+ AW++ Q D V + + V+ N+GG + VEGL+ F+
Sbjct: 78 IISEEDENGQLLVSIRRIQYREAWDKVIAKQDSDEVFEAECVSVNRGGAIFLVEGLRAFL 137
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSVQ 361
P S ++ + ++L+ + +PLKF+EV++E ++L++S+R+AV + Q +L G V+ G V+
Sbjct: 138 PGSHLTGRLPDDDLVGQTLPLKFLEVNQEDNKLVVSNRRAVVEEQMAELSRGDVIDGIVK 197
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+LKPYGAF+++GG+SGLLH+SQIS DRITD+ VLQPG
Sbjct: 198 ALKPYGAFVEVGGMSGLLHISQISMDRITDLEQVLQPG 235
[83][TOP]
>UniRef100_Q70DX8 Plastid ribosomal protein S1 n=1 Tax=Chlamydomonas reinhardtii
RepID=Q70DX8_CHLRE
Length = 436
Score = 134 bits (336), Expect = 4e-30
Identities = 72/165 (43%), Positives = 104/165 (63%), Gaps = 7/165 (4%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + E + +SL +++ W+R RQLQ ED V + + NKGG++ + GF
Sbjct: 194 MVVEDEEEYGQVIVSLAAMEATTFWQRIRQLQEEDITVTVSVESVNKGGMLVKFGIYDGF 253
Query: 182 VPFSQIS---TKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVA----DSQGQLGIGS 340
+P SQ T E L+ E+ +KF+EVDEE RL+ SH++A + D QG +G
Sbjct: 254 IPVSQFGPSITPDNMESLVGFELQVKFLEVDEEAERLVFSHKRASSTVSNDIQG-FKVGD 312
Query: 341 VVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
VV G VQS+KPYGAFID+GG++GLLHVSQISHDR+ + +LQ G
Sbjct: 313 VVAGVVQSVKPYGAFIDLGGVTGLLHVSQISHDRVLVLDKILQEG 357
[84][TOP]
>UniRef100_Q111W5 SSU ribosomal protein S1P n=1 Tax=Trichodesmium erythraeum IMS101
RepID=Q111W5_TRIEI
Length = 304
Score = 122 bits (307), Expect = 1e-26
Identities = 52/159 (32%), Positives = 101/159 (63%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+II E ++D + LS+K ++ WER +L+A + +++ NKGGV +++ L+GF
Sbjct: 89 LIIREQDADGEVLLSIKQLEINQIWERLAELEAGGQSFQVRVIGTNKGGVTVDIQSLRGF 148
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
VP S + + E L+++ + + F+E+D+E+ ++++S R A + +L +G ++ G V
Sbjct: 149 VPRSHLLARDNLESLIDQVLTVNFLELDQEKKKIVMSQRLATQSAGFSKLAVGQLLEGKV 208
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+KP+G F+D+ G++GLLH++Q+S R+ +ST+ G
Sbjct: 209 VGVKPFGVFVDLEGLTGLLHITQVSQKRVDSLSTIFSQG 247
[85][TOP]
>UniRef100_Q3ALN4 RNA binding S1 n=1 Tax=Synechococcus sp. CC9605 RepID=Q3ALN4_SYNSC
Length = 424
Score = 122 bits (305), Expect = 2e-26
Identities = 60/159 (37%), Positives = 101/159 (63%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S ++++ +W+R ++L+ + VV+ + N N+GGV +++GL+GF
Sbjct: 205 LVTREQNADGMVTISCRALELRKSWDRVKELEKQGKVVQVIVNNFNRGGVTCDLQGLRGF 264
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSH-RKAVADSQGQLGIGSVVTGSV 358
+P SQ+ +EL+ K + + F+EV+ E +L+LS R AVA+ L +G +V G V
Sbjct: 265 IPRSQLQNGENHQELVGKTLGVAFIEVNSETRKLVLSEKRAAVAERFQDLEVGQLVEGQV 324
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG FID+GGISGLLH S I++ R+ I V G
Sbjct: 325 AAVKPYGLFIDLGGISGLLHQSAITNGRLRSIREVFDQG 363
[86][TOP]
>UniRef100_C7QUH8 RNA binding S1 domain protein n=2 Tax=Cyanothece RepID=C7QUH8_CYAP0
Length = 302
Score = 120 bits (301), Expect = 5e-26
Identities = 55/159 (34%), Positives = 103/159 (64%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+II + S+ + LS + +Q AWE+ ++ V+ +++ NKGGV+ +VEGL+GF
Sbjct: 87 LIISDQNSEGQVKLSCRQLQLQQAWEKVAEIAETGKTVQMRVIGTNKGGVIGDVEGLRGF 146
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P S + K + L+ + + F+EV+ + ++L+LS R+ + +Q ++ G+++TG V
Sbjct: 147 IPRSHLLEKDNLDALVGQLLTANFLEVNPDDNKLVLSQRRVIMAAQMDKITAGNLITGKV 206
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++PYG F+D+ G++GLLH++QIS RI D++T+ + G
Sbjct: 207 AKIQPYGIFVDLNGVTGLLHITQISGLRIDDLNTLFKFG 245
[87][TOP]
>UniRef100_B0C7U0 30S ribosomal protein S1 n=1 Tax=Acaryochloris marina MBIC11017
RepID=B0C7U0_ACAM1
Length = 289
Score = 118 bits (296), Expect = 2e-25
Identities = 58/159 (36%), Positives = 104/159 (65%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+II +++ + LS++ ++ W + +LQ++ V+ I NKGGV A+VEGL+GF
Sbjct: 75 LIIKGQDANGQVTLSIRRLELKHLWTKLLELQSQSQSVQVTITGVNKGGVTADVEGLRGF 134
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P S + + E + ++ + F+EVD ++ +L+LS+R A S+ G+L IG +V+G+V
Sbjct: 135 IPRSHLLDRDNLEGQIGSQLTVTFLEVDPDRKKLVLSNRMAEQSSRIGELEIGQLVSGTV 194
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
LKP+GAFI + G++GLLH+ ++S + + ++S VL+ G
Sbjct: 195 SDLKPFGAFIKLDGLTGLLHIKEVSQNFVPNLSAVLKIG 233
[88][TOP]
>UniRef100_Q4C3R0 RNA binding S1 n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4C3R0_CROWT
Length = 313
Score = 118 bits (296), Expect = 2e-25
Identities = 57/157 (36%), Positives = 99/157 (63%), Gaps = 1/157 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++I E +D + LS + +Q AWE ++ V+ ++ NKGGVV EVEGL+GF
Sbjct: 96 IVISEQNADGQVKLSRRQLQLKEAWENVEEIAEMGHSVQMRVTRTNKGGVVGEVEGLQGF 155
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P S + K L+ + + F+EV++ ++L+LS R+A+A ++ +L +G +V+G V
Sbjct: 156 IPRSHLMEKEDLNGLVGQLLTATFLEVNQSTNKLVLSQRRAIAAARIDKLEVGQLVSGKV 215
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQ 469
++PYG F+D G+SGLLH++Q+S R+ D++ V +
Sbjct: 216 ARIQPYGIFVDFEGVSGLLHITQVSGSRVDDLNHVFK 252
[89][TOP]
>UniRef100_Q46GP7 SSU ribosomal protein S1P n=1 Tax=Prochlorococcus marinus str.
NATL2A RepID=Q46GP7_PROMT
Length = 431
Score = 117 bits (294), Expect = 3e-25
Identities = 55/159 (34%), Positives = 98/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S ++++ +W++ + L E V++ KI N+GGV + EGL+GF
Sbjct: 202 LVTREQNADGMVTISCRALELRKSWDKVQNLAKEGKVIRVKINGFNRGGVTCDFEGLRGF 261
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRK-AVADSQGQLGIGSVVTGSV 358
+P SQ+ + L+ K I F+EV+ E+ +L+LS +K A+A +L IG ++ G +
Sbjct: 262 IPRSQLEDGENHQSLVSKTISTAFLEVNPERRKLVLSEKKAAIASRFSELEIGQLIEGEI 321
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG F+D+ G+SGLLH S +++ + + V QPG
Sbjct: 322 LTIKPYGFFVDLRGVSGLLHHSMVTNGSMRSLREVFQPG 360
[90][TOP]
>UniRef100_A2C0Y8 30S ribosomal protein S1 protein B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. NATL1A
RepID=A2C0Y8_PROM1
Length = 465
Score = 117 bits (294), Expect = 3e-25
Identities = 55/159 (34%), Positives = 98/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S ++++ +W++ + L E V++ KI N+GGV + EGL+GF
Sbjct: 236 LVTREQNADGMVTISCRALELRKSWDKVQNLAKEGKVIRVKINGFNRGGVTCDFEGLRGF 295
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRK-AVADSQGQLGIGSVVTGSV 358
+P SQ+ + L+ K I F+EV+ E+ +L+LS +K A+A +L IG ++ G +
Sbjct: 296 IPRSQLEDGENHQSLVSKTISTAFLEVNPERRKLVLSEKKAAIASRFSELEIGQLIEGEI 355
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG F+D+ G+SGLLH S +++ + + V QPG
Sbjct: 356 LTIKPYGFFVDLRGVSGLLHHSMVTNGSMRSLREVFQPG 394
[91][TOP]
>UniRef100_Q0QKQ2 30S ribosomal protein S1 homolog B n=1 Tax=uncultured marine type-A
Synechococcus GOM 3M9 RepID=Q0QKQ2_9SYNE
Length = 423
Score = 117 bits (292), Expect = 5e-25
Identities = 59/159 (37%), Positives = 98/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S +++ +WER ++++ + VV+ + N+GGV ++EGL+GF
Sbjct: 204 LVTREQNADGMVTISCRALALRKSWERVKEMEKQGKVVQVIVNGFNRGGVTCDLEGLRGF 263
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSH-RKAVADSQGQLGIGSVVTGSV 358
+P SQ+ +EL+ K + + F+EV+ E +L+LS R AVA +L +G +V G V
Sbjct: 264 IPRSQLQDGENHQELVGKTLGVAFLEVNSETRKLVLSEKRAAVAARFSELEVGQLVEGQV 323
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG FID+GGISGLLH S I++ + I V G
Sbjct: 324 AAVKPYGLFIDLGGISGLLHQSMITNGSLRSIREVFDQG 362
[92][TOP]
>UniRef100_A3YYV2 30S ribosomal protein S1-like B, putative n=1 Tax=Synechococcus sp.
WH 5701 RepID=A3YYV2_9SYNE
Length = 403
Score = 117 bits (292), Expect = 5e-25
Identities = 57/159 (35%), Positives = 97/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S +++ +WE+ +QL+A VV+ K+ N+GGV ++EGL+GF
Sbjct: 184 LVTREQNADGMVTISARALALRQSWEKVKQLEAAGKVVQVKVSGFNRGGVTCDLEGLRGF 243
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADS-QGQLGIGSVVTGSV 358
+P SQ+ E+L+ + F+EV+ + +L+LS ++A + S +L +G +V G V
Sbjct: 244 IPRSQLQNGENHEQLVGTSFAVAFLEVNADTRKLVLSEKRAASASLLAELEVGQLVDGQV 303
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
S+KPYG F+D+GG+SGLLH S I+ + DI G
Sbjct: 304 VSVKPYGFFVDLGGVSGLLHQSSITGVHLRDIREAFSQG 342
[93][TOP]
>UniRef100_A5GJG3 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GJG3_SYNPW
Length = 403
Score = 116 bits (290), Expect = 9e-25
Identities = 57/159 (35%), Positives = 97/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S +++ +W++ +QL+ E V + K+ N+GGV ++EGL+GF
Sbjct: 184 LVTREQNADGMVTISCRALALRQSWDKVKQLEKEGKVAQVKVSGFNRGGVTCDLEGLRGF 243
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P SQ+ E L+ K + + F+EV+ E +L+LS +KA ++ +L +G +V G V
Sbjct: 244 IPRSQLQEGENHEALVGKTLGVAFLEVNPETRKLVLSEKKAATAARFAELEVGQLVEGHV 303
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG FID+GGISGLLH S I+ + + V G
Sbjct: 304 AAVKPYGLFIDLGGISGLLHQSMITGGSLRSLREVFDQG 342
[94][TOP]
>UniRef100_D0CHB9 SSU ribosomal protein S1P n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CHB9_9SYNE
Length = 390
Score = 116 bits (290), Expect = 9e-25
Identities = 58/159 (36%), Positives = 97/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S ++++ +W+R ++L + VV+ + N+GGV ++EGL+GF
Sbjct: 171 LVTREQNADGMVTISCRALELRKSWDRVKELDKQGKVVQVIVNGFNRGGVTCDLEGLRGF 230
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSH-RKAVADSQGQLGIGSVVTGSV 358
+P SQ+ +E + K + + F+EV+ E +L+LS R AVA+ L +G +V G V
Sbjct: 231 IPRSQLQNGENHQEFVGKTLGVAFIEVNSETRKLVLSEKRAAVAERFQDLEVGQLVEGQV 290
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG FID+GGISGLLH S I++ + I V G
Sbjct: 291 AAVKPYGLFIDLGGISGLLHQSAITNGSLRSIREVFDQG 329
[95][TOP]
>UniRef100_C6LB27 Putative S1 RNA binding domain protein n=1 Tax=Bryantella
formatexigens DSM 14469 RepID=C6LB27_9FIRM
Length = 354
Score = 116 bits (290), Expect = 9e-25
Identities = 66/168 (39%), Positives = 101/168 (60%), Gaps = 11/168 (6%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++ + + LS K LAW+R + L + ++K K+ K GVV VEG++GFV
Sbjct: 131 VVRRDGGQGQIMLSRKEANDVLAWDRLKTLMEKQTIIKTKVAGVVKAGVVVYVEGIRGFV 190
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQ--------LGI 334
P S++S EE L KE+ L+ ++V+EE +LILS R+ + + + + + +
Sbjct: 191 PASKLSLNYVENLEEWLGKEVELRVIDVNEEDKKLILSAREILREREAEEKKARISNVEV 250
Query: 335 GSVVTGSVQSLKPYGAFIDIG-GISGLLHVSQISHDRITDISTVLQPG 475
G V G+V+SL+PYGAFI++G G+SGL+HVSQIS RI S VL+ G
Sbjct: 251 GLVTEGTVESLQPYGAFINLGNGLSGLVHVSQISEKRIKSPSAVLKVG 298
[96][TOP]
>UniRef100_A5GUD2 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. RCC307
RepID=A5GUD2_SYNR3
Length = 397
Score = 115 bits (289), Expect = 1e-24
Identities = 58/159 (36%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S +++ AW++ RQL+ E VV+ KI N+GG ++EGL+GF
Sbjct: 178 LVTREQNADGMVTVSCRALALRQAWDKVRQLEKEGKVVQVKITGFNRGGCTCDLEGLRGF 237
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRK-AVADSQGQLGIGSVVTGSV 358
+P SQ++ E L+ K + + F+EV+ + +L+LS +K A+A L +G +V+G V
Sbjct: 238 IPRSQLNEGENHEALVGKTVGVAFLEVNPDTRKLVLSEKKAAMAAFFADLEVGQLVSGLV 297
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
S+KPYG F+D+GG+SGLLH S I+ + ++ + G
Sbjct: 298 TSVKPYGFFVDLGGVSGLLHHSCITGGTMRELREIFDSG 336
[97][TOP]
>UniRef100_Q0QKJ9 30S ribosomal protein S1 homolog B n=1 Tax=uncultured marine type-A
Synechococcus GOM 3O6 RepID=Q0QKJ9_9SYNE
Length = 408
Score = 115 bits (289), Expect = 1e-24
Identities = 58/159 (36%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S ++++ +W++ ++L+ + VV+ + N+GGV ++EGL+GF
Sbjct: 189 LVTREQNADGMVTISCRALELRKSWDKVKELEKQGKVVQVIVNGFNRGGVTCDLEGLRGF 248
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSH-RKAVADSQGQLGIGSVVTGSV 358
+P SQ+ +EL+ K + + F+EV+ E +L+LS R AVA +L +G +V G V
Sbjct: 249 IPRSQLQEGDNHQELVGKTLGVAFIEVNSETRKLVLSQKRAAVAARFQELEVGQLVEGVV 308
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG FID+GGISGLLH S I++ + I V G
Sbjct: 309 AAVKPYGLFIDLGGISGLLHQSSITNGSLRSIREVFDQG 347
[98][TOP]
>UniRef100_Q1XDE2 30S ribosomal protein S1, chloroplastic n=1 Tax=Porphyra yezoensis
RepID=RR1_PORYE
Length = 263
Score = 115 bits (289), Expect = 1e-24
Identities = 56/158 (35%), Positives = 96/158 (60%), Gaps = 1/158 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++ N L LS++ +++ AW+R RQL AED+++ I NKGG++ +EG+ GFV
Sbjct: 81 LLDYNIQSKQLILSIRRLEYIRAWKRIRQLLAEDSLLNVMIKGFNKGGMIINLEGISGFV 140
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKA-VADSQGQLGIGSVVTGSVQ 361
P S + E+ K I LK + V+E+ + LILSHR+A ++ + L +G+++ G +
Sbjct: 141 PNSHLGNFQKSEQFNNKFIKLKLLNVEEKSNNLILSHRRALISQASSNLIVGNIIEGIIN 200
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+ PYG FI +G + GL+H+S+I+ + IS+ + G
Sbjct: 201 QITPYGLFIKVGNLKGLVHISEINIKNLEQISSQFKIG 238
[99][TOP]
>UniRef100_Q7VD53 Ribosomal protein S1 n=1 Tax=Prochlorococcus marinus
RepID=Q7VD53_PROMA
Length = 417
Score = 115 bits (288), Expect = 2e-24
Identities = 58/159 (36%), Positives = 97/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S +++ +W++ QL E VV+ K+ N+GGV ++EGL+GF
Sbjct: 198 LVTREQNADGMVTISCRALALRKSWDKVIQLAKEAKVVEVKLNGFNRGGVTCDLEGLRGF 257
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P SQ++ E L+ K I + F+EV + +LILS +KA ++ +L +G ++ G V
Sbjct: 258 IPRSQLNQGDDHESLVGKTINVAFIEVSPDNRKLILSEKKAATAAKFAELEVGQLIEGKV 317
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
S+KPYG F+D+GGISGLLH S I++ + + V G
Sbjct: 318 ISVKPYGFFVDLGGISGLLHQSMITNGSLRSLREVFNQG 356
[100][TOP]
>UniRef100_Q0QM09 30S ribosomal protein S1-like protein B n=1 Tax=uncultured marine
type-A Synechococcus 5B2 RepID=Q0QM09_9SYNE
Length = 411
Score = 115 bits (288), Expect = 2e-24
Identities = 58/159 (36%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S ++++ +W++ ++L+ + VV+ + N+GGV ++EGL+GF
Sbjct: 192 LVTREQNADGMVTISCRALELRKSWDKVKELEKQGKVVQVIVNGFNRGGVTCDLEGLRGF 251
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSH-RKAVADSQGQLGIGSVVTGSV 358
+P SQ+ +EL+ K + + F+EV+ E +L+LS R A+A +L IG +V G V
Sbjct: 252 IPRSQLQDGENHQELVGKTLGVAFIEVNSETRKLVLSEKRAAIAARFQELEIGQLVEGLV 311
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG FID+GGISGLLH S I++ + I V G
Sbjct: 312 AAVKPYGLFIDLGGISGLLHQSAITNGSLRSIREVFDQG 350
[101][TOP]
>UniRef100_Q0QKF1 30S ribosomal protein S1 homolog B n=1 Tax=uncultured marine type-A
Synechococcus GOM 3O12 RepID=Q0QKF1_9SYNE
Length = 408
Score = 115 bits (288), Expect = 2e-24
Identities = 58/159 (36%), Positives = 98/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S ++++ +W++ ++ + E VV+ + N+GGV ++EGL+GF
Sbjct: 189 LVTREQNADGMVTISCRALELRKSWDKVKEFEKEGKVVQVVVNGFNRGGVTCDLEGLRGF 248
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSH-RKAVADSQGQLGIGSVVTGSV 358
+P SQ+ +EL+ K + + F+EV+ E +L+LS R AVA +L +G +V G V
Sbjct: 249 IPRSQLEDGENHQELVGKTLGVAFIEVNSETRKLVLSQKRAAVAARFQELEVGQLVEGVV 308
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG FID+GGISGLLH S I++ + I V G
Sbjct: 309 AAVKPYGLFIDLGGISGLLHQSAITNGSLRSIREVFDQG 347
[102][TOP]
>UniRef100_A4CS32 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 7805
RepID=A4CS32_SYNPV
Length = 430
Score = 115 bits (288), Expect = 2e-24
Identities = 57/159 (35%), Positives = 97/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S +++ +W++ +QL+ E V + K+ N+GGV ++EGL+GF
Sbjct: 211 LVTREQNADGMVTISCRALALRQSWDKVKQLEKEGKVAQVKVSGFNRGGVTCDLEGLRGF 270
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P SQ+ E L+ K + + F+EV+ + +L+LS +KA ++ +L +G +V G V
Sbjct: 271 IPRSQLQDGENHEALVGKTLGVAFLEVNPDTRKLVLSEKKAATAARFAELEVGQLVEGHV 330
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG FID+GGISGLLH S I+ + I V G
Sbjct: 331 AAVKPYGLFIDLGGISGLLHQSMITGGSLRSIREVFDHG 369
[103][TOP]
>UniRef100_Q7U5G7 30S ribosomal protein S1 homolog B, putative Nbp1 n=1
Tax=Synechococcus sp. WH 8102 RepID=Q7U5G7_SYNPX
Length = 406
Score = 115 bits (287), Expect = 2e-24
Identities = 58/159 (36%), Positives = 98/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S ++++ +W++ ++L+ VV+ + N+GGV ++EGL+GF
Sbjct: 187 LVTREQNADGMVTISCRALELRKSWDKVKELEKHGKVVQVIVNGFNRGGVTCDLEGLRGF 246
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSH-RKAVADSQGQLGIGSVVTGSV 358
+P SQ+ +EL+ K + + F+EV+ E +L+LS R AVA +L +G +V G V
Sbjct: 247 IPRSQLQEGDNHQELVGKTLGVAFIEVNSETRKLVLSQKRAAVAARFQELEVGQLVEGVV 306
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG FID+GGISGLLH S I++ + I V G
Sbjct: 307 AAVKPYGLFIDLGGISGLLHQSSITNGSLRSIREVFDQG 345
[104][TOP]
>UniRef100_B7K791 RNA binding S1 domain protein n=1 Tax=Cyanothece sp. PCC 7424
RepID=B7K791_CYAP7
Length = 284
Score = 115 bits (287), Expect = 2e-24
Identities = 56/159 (35%), Positives = 97/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+II +++ L LS + + AW + +++ V+ ++ N+GGV EVEGL+GF
Sbjct: 71 LIISSADAEGQLILSRRQLIIKQAWNQVKEIAESGTSVQMRVTGINRGGVTGEVEGLRGF 130
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAV-ADSQGQLGIGSVVTGSV 358
+P S + K + L+ + I F++VD + ++L+LS R+ V A + QL IG++V G V
Sbjct: 131 IPRSHLVEKEDLDSLVGQSITANFIQVDPDNNKLVLSQRQLVRAAAMSQLTIGTLVEGKV 190
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++PYG F+DI G +GLLH++Q+S I ++T+ + G
Sbjct: 191 AKIQPYGVFVDINGATGLLHITQVSGVHIDALTTIFKIG 229
[105][TOP]
>UniRef100_A9BEF4 30S ribosomal protein S1-like protein B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. MIT 9211
RepID=A9BEF4_PROM4
Length = 416
Score = 115 bits (287), Expect = 2e-24
Identities = 56/159 (35%), Positives = 96/159 (60%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S +++ +WE QL+ + V+ I N+GGV ++EGL+GF
Sbjct: 196 LVTREQNADGMVTISCRALVLRKSWETVMQLEKDGKTVEVTINGFNRGGVTCDLEGLRGF 255
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P SQ+ E L+ K++ + F+EV+ + +LILS +KA ++ +L IG +V G +
Sbjct: 256 IPRSQLEQTENHESLVGKKLCVAFIEVNPDSRKLILSEKKAATAARFAELEIGQIVAGEI 315
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG F+D+GG+SGLLH S I++ I + V G
Sbjct: 316 LAIKPYGFFVDLGGVSGLLHQSMITNGSIRSLREVFSQG 354
[106][TOP]
>UniRef100_B5ILL4 Putative uncharacterized protein n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5ILL4_9CHRO
Length = 422
Score = 114 bits (286), Expect = 3e-24
Identities = 57/159 (35%), Positives = 97/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S +++ +WE+ R L+ E VV+ K+ N+GGV ++EGL+GF
Sbjct: 203 LVTREQNADGMVTVSARALALRQSWEKVRVLEKEGKVVQVKVNGFNRGGVTCDLEGLRGF 262
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P SQ+ E L+ K + + F+EV+ E +L+LS ++A ++ +L +G +V G V
Sbjct: 263 IPRSQLQEGENHEALVGKTLGVTFLEVNPETRKLVLSEKRAATAARFAELEVGQLVEGVV 322
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
S+KPYG F+D+GGISGLLH S ++ + D+ G
Sbjct: 323 ASIKPYGFFVDLGGISGLLHHSCVTGAELRDLREAFSQG 361
[107][TOP]
>UniRef100_B4WRF0 S1 RNA binding domain protein n=1 Tax=Synechococcus sp. PCC 7335
RepID=B4WRF0_9SYNE
Length = 304
Score = 114 bits (286), Expect = 3e-24
Identities = 61/160 (38%), Positives = 100/160 (62%), Gaps = 2/160 (1%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+II + +++ L +S+++++ WER R+ Q V++ I +NKGGV A+V GL+ F
Sbjct: 87 LIIRDQDANGQLVISIRAMEIKELWERLRERQENGDVLEVTISGSNKGGVTADVSGLRAF 146
Query: 182 VPFSQISTKSTG-EELLEKEIPLKFVEVDEEQSRLILSHRKAV-ADSQGQLGIGSVVTGS 355
+P S ++ + + L+ I F+EVDEE+++L+LS R A A + L G ++ G+
Sbjct: 147 IPRSHLARRVEDLDTLMGATINAAFLEVDEEKNKLLLSERIAARATAMSSLTKGELIEGT 206
Query: 356 VQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+ SLKP+GAF+D GG SGLLH+ QIS I+ + V + G
Sbjct: 207 IASLKPFGAFVDFGGASGLLHIKQISKSYISALGDVFKVG 246
[108][TOP]
>UniRef100_B1WY16 30S ribosomal protein S1 n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WY16_CYAA5
Length = 302
Score = 114 bits (285), Expect = 3e-24
Identities = 57/153 (37%), Positives = 94/153 (61%), Gaps = 1/153 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++I E ++ + LS + +Q AWE + V+ ++ NKGGVV EVEGL+GF
Sbjct: 87 LVISEQNAEGQVKLSRRQLQLKEAWENVAESAEMGHSVQMRVTRTNKGGVVGEVEGLQGF 146
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P S + K L+ + + F+EV+ ++L+LS RKA+A ++ +L G +VTG V
Sbjct: 147 IPRSHLLEKEDLNSLVGQLLTATFLEVNPSTNKLVLSQRKAIAAARMDKLEAGQLVTGKV 206
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDIS 457
++PYG F+D G+SGLLH++Q+S R+ D++
Sbjct: 207 SRIQPYGVFVDFEGVSGLLHITQVSGSRVDDLN 239
[109][TOP]
>UniRef100_A3IGN9 30S ribosomal protein S1 n=1 Tax=Cyanothece sp. CCY0110
RepID=A3IGN9_9CHRO
Length = 304
Score = 114 bits (285), Expect = 3e-24
Identities = 56/157 (35%), Positives = 96/157 (61%), Gaps = 1/157 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + LS + +Q AWE ++ V+ ++ NKGGVV EVEGL+GF
Sbjct: 87 LVTSEQNADGQVKLSRRQLQLKEAWENVGEIAEMGHSVQMRVTRTNKGGVVGEVEGLQGF 146
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P S + K L+ + + F+EV+ ++L+LS RKA+A ++ +L G +V+G V
Sbjct: 147 IPRSHLLEKEDLNALVGQMLTATFLEVNPSTNKLVLSQRKAIAAARMDKLEAGQLVSGKV 206
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQ 469
++PYG F+D G+SGLLH++Q+S R+ D++ + +
Sbjct: 207 SRIQPYGVFVDFEGVSGLLHITQVSGSRVDDLNHIFK 243
[110][TOP]
>UniRef100_Q7V6D2 30S ribosomal protein S1 homolog B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. MIT 9313
RepID=Q7V6D2_PROMM
Length = 421
Score = 114 bits (284), Expect = 4e-24
Identities = 54/159 (33%), Positives = 97/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S ++++ +W + +Q++ E V + K+ N+GGV ++EGL+GF
Sbjct: 202 LVTREQNADGMVTISCRALELRKSWSKVQQMEKEGKVAQVKVNGFNRGGVTCDLEGLRGF 261
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P SQ+ E L+ K + + F+EV+ E +L+LS ++A ++ +L +G +V G V
Sbjct: 262 IPRSQLQNGENHEALIGKTLGVAFLEVNPETRKLVLSEKRAATAARFSELEVGQLVEGQV 321
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG FID+GG+SGLLH S I+ + + V G
Sbjct: 322 VAVKPYGFFIDLGGVSGLLHQSMITGGSLRSLREVFNQG 360
[111][TOP]
>UniRef100_Q8YXX8 30S ribosomal protein S1 n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8YXX8_ANASP
Length = 305
Score = 113 bits (283), Expect = 6e-24
Identities = 55/159 (34%), Positives = 88/159 (55%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+II E +++ + LS + ++ WE+ Q++ V K+ NKGGV +V+ L+GF
Sbjct: 87 IIIREQDAEGQVTLSRRQLEINHIWEKLAQMKENSQPVDVKVTGVNKGGVTVDVQSLRGF 146
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P S ++ + E L + F+EVD +L+LS R S QL IG +V G +
Sbjct: 147 IPRSHLTERDNLEALKGHTLTAGFLEVDRNNKKLVLSQRLVTRSSNFNQLEIGQLVEGKI 206
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+KP+G F+D+ G+S LLH+ Q+S I + V QPG
Sbjct: 207 TGIKPFGVFVDLNGLSALLHIKQVSQKFIESLEKVFQPG 245
[112][TOP]
>UniRef100_Q3M6P9 SSU ribosomal protein S1P n=1 Tax=Anabaena variabilis ATCC 29413
RepID=Q3M6P9_ANAVT
Length = 302
Score = 113 bits (283), Expect = 6e-24
Identities = 55/159 (34%), Positives = 88/159 (55%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+II E +++ + LS + ++ WE+ Q++ V K+ NKGGV +V+ L+GF
Sbjct: 87 IIIREQDAEGQVTLSRRQLEINHIWEKLAQMKENSQPVDVKVTGVNKGGVTVDVQSLRGF 146
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P S ++ + E L + F+EVD +L+LS R S QL IG +V G +
Sbjct: 147 IPRSHLTERDNLEALKGHTLTAGFLEVDRNNKKLVLSQRLVTRSSNFNQLEIGQLVEGKI 206
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+KP+G F+D+ G+S LLH+ Q+S I + V QPG
Sbjct: 207 TGIKPFGVFVDLNGLSALLHIKQVSQKFIESLEKVFQPG 245
[113][TOP]
>UniRef100_Q3AV59 SSU ribosomal protein S1P n=1 Tax=Synechococcus sp. CC9902
RepID=Q3AV59_SYNS9
Length = 412
Score = 113 bits (283), Expect = 6e-24
Identities = 57/159 (35%), Positives = 98/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S ++++ +W++ + L+ E VV+ + N+GGV ++EGL+GF
Sbjct: 193 LVTREQNADGMVTISCRALELRKSWDKVKVLEKEGKVVQVIVSGFNRGGVTCDLEGLRGF 252
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQ-LGIGSVVTGSV 358
+P SQ+ +EL+ K + + F+EV+ +L+LS ++A ++ Q L +G +V G V
Sbjct: 253 IPRSQLQDGENHQELVGKTLGVAFLEVNSGTRKLVLSEKRAATAARFQELEVGQLVEGLV 312
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
S+KPYG FID+GGISGLLH S I++ + I V G
Sbjct: 313 ASVKPYGLFIDLGGISGLLHQSSITNGSLRSIREVFDQG 351
[114][TOP]
>UniRef100_A2C7R6 30S ribosomal protein S1 protein B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. MIT 9303
RepID=A2C7R6_PROM3
Length = 481
Score = 113 bits (283), Expect = 6e-24
Identities = 54/159 (33%), Positives = 97/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S ++++ +W + +Q++ E V + K+ N+GGV ++EGL+GF
Sbjct: 262 LVTREQNADGMVTISCRALELRKSWSKVQQMEKEGKVAQVKVNGFNRGGVTCDLEGLRGF 321
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P SQ+ E L+ K + + F+EV+ E +L+LS ++A ++ +L +G +V G V
Sbjct: 322 IPRSQLQNGENHEALVGKTLGVAFLEVNPETRKLVLSEKRAATAARFSELEVGQLVEGQV 381
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG FID+GG+SGLLH S I+ + + V G
Sbjct: 382 VAVKPYGFFIDLGGVSGLLHQSMITGGSLRSLREVFNQG 420
[115][TOP]
>UniRef100_P51345 30S ribosomal protein S1, chloroplastic n=1 Tax=Porphyra purpurea
RepID=RR1_PORPU
Length = 263
Score = 113 bits (283), Expect = 6e-24
Identities = 56/158 (35%), Positives = 96/158 (60%), Gaps = 1/158 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++ N L LS++ +++ AW+R RQL AED+++ +I NKGG++ +EG+ GFV
Sbjct: 81 LLDYNVESRQLILSIRRLEYIRAWKRIRQLLAEDSLLDVRIKGFNKGGMIVNLEGISGFV 140
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKA-VADSQGQLGIGSVVTGSVQ 361
P S ++ S K I LK + V+E+ + LILSHR+A +A + L +G+++ G +
Sbjct: 141 PNSHLNNFSKNTSSTNKFIKLKLLNVEEKSNNLILSHRRALIAQASSNLIVGNIIEGVIN 200
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+ PYG FI G + GL+H+S+I+ ++ I + + G
Sbjct: 201 QITPYGLFIKAGNLKGLVHISEINVKQVERIPSQFKIG 238
[116][TOP]
>UniRef100_Q0I8M6 Ribosomal protein S1 n=1 Tax=Synechococcus sp. CC9311
RepID=Q0I8M6_SYNS3
Length = 401
Score = 113 bits (282), Expect = 8e-24
Identities = 54/159 (33%), Positives = 97/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S +++ +W++ +QL+ + V + K+ N+GGV ++EGL+GF
Sbjct: 182 LVTREQNADGMVTISCRALALRQSWDKVKQLEKDGRVSQVKVTGFNRGGVTCDLEGLRGF 241
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P SQ+ E L+ K + + F+EV+ E +L+LS ++A ++ +L IG +V G V
Sbjct: 242 IPRSQLQDGENHETLVGKTLGVAFLEVNSETRKLVLSEKRAATAARFSELEIGQLVEGHV 301
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG F+D+GGISGLLH S I+ + + + G
Sbjct: 302 AAIKPYGLFVDLGGISGLLHQSAITGGSMRSMREIFDQG 340
[117][TOP]
>UniRef100_B0JPE8 Nucleic acid-binding protein n=1 Tax=Microcystis aeruginosa
NIES-843 RepID=B0JPE8_MICAN
Length = 293
Score = 113 bits (282), Expect = 8e-24
Identities = 52/139 (37%), Positives = 91/139 (65%), Gaps = 1/139 (0%)
Frame = +2
Query: 20 ESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQI 199
+++ + LSL+ + AWE R++ V+ ++ NKGGV EVEGLKGF+P S +
Sbjct: 85 DAEGQVTLSLRQLLLQKAWENVREISESGKSVQLRVTGVNKGGVTGEVEGLKGFIPRSHL 144
Query: 200 STKSTGEELLEKEIPLKFVEVDEEQSRLILSHRK-AVADSQGQLGIGSVVTGSVQSLKPY 376
K+ + L+ + + F+++D+E ++L+LS R+ A A++ QL +G +++G+V L+PY
Sbjct: 145 IEKNDLDSLIGQLLTATFIQIDQENNKLVLSQREIARANAISQLAVGKLLSGTVVKLQPY 204
Query: 377 GAFIDIGGISGLLHVSQIS 433
G F+D GG++GLLH Q++
Sbjct: 205 GVFVDCGGVTGLLHAKQVT 223
[118][TOP]
>UniRef100_Q060S3 RNA binding S1 n=1 Tax=Synechococcus sp. BL107 RepID=Q060S3_9SYNE
Length = 412
Score = 113 bits (282), Expect = 8e-24
Identities = 58/159 (36%), Positives = 98/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S ++++ +W++ + L+ E VV+ + N+GGV ++EGL+GF
Sbjct: 193 LVTREQNADGMVTISCRALELRKSWDKVKVLEKEGKVVQVIVSGFNRGGVTCDLEGLRGF 252
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKA-VADSQGQLGIGSVVTGSV 358
+P SQ+ +EL+ K + + F+EV+ +L+LS ++A VA +L +G +V G V
Sbjct: 253 IPRSQLQDGENHQELVGKTLGVAFLEVNSGTRKLVLSEKRASVAARFQELEVGQLVDGLV 312
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
S+KPYG FID+GGISGLLH S I++ + I V G
Sbjct: 313 ASVKPYGLFIDLGGISGLLHQSAITNGSLRSIREVFDEG 351
[119][TOP]
>UniRef100_A8YAJ6 Similar to tr|Q4C3R0|Q4C3R0_CROWT RNA binding S1 n=1
Tax=Microcystis aeruginosa PCC 7806 RepID=A8YAJ6_MICAE
Length = 293
Score = 113 bits (282), Expect = 8e-24
Identities = 52/139 (37%), Positives = 91/139 (65%), Gaps = 1/139 (0%)
Frame = +2
Query: 20 ESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQI 199
+++ + LSL+ + AWE R++ V+ ++ NKGGV EVEGLKGF+P S +
Sbjct: 85 DAEGQVTLSLRQLLLQKAWENVREISESGKSVQLRVTGVNKGGVTGEVEGLKGFIPRSHL 144
Query: 200 STKSTGEELLEKEIPLKFVEVDEEQSRLILSHRK-AVADSQGQLGIGSVVTGSVQSLKPY 376
K+ + L+ + + F+++D+E ++L+LS R+ A A++ QL +G +++G+V L+PY
Sbjct: 145 IEKNDLDSLIGQLLTATFIQIDQENNKLVLSQREIARANAISQLAVGKLLSGTVVKLQPY 204
Query: 377 GAFIDIGGISGLLHVSQIS 433
G F+D GG++GLLH Q++
Sbjct: 205 GVFVDCGGVTGLLHAKQVT 223
[120][TOP]
>UniRef100_Q05RJ7 Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9916
RepID=Q05RJ7_9SYNE
Length = 439
Score = 112 bits (280), Expect = 1e-23
Identities = 55/159 (34%), Positives = 97/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S +++ +W++ + L+ E VV+ K+ N+GGV ++EGL+GF
Sbjct: 220 LVTREQNADGMVTISCRALALRQSWDKVKVLEKEGKVVQVKVSGFNRGGVTCDLEGLRGF 279
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P SQ+ E L+ K + + F+EV+ E +L+LS ++A ++ +L +G +V G V
Sbjct: 280 IPRSQLQDGENHESLVGKTLGVAFLEVNSETRKLVLSEKRAATAARFSELEVGQLVEGHV 339
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG F+D+GGISGLLH S I+ + + V G
Sbjct: 340 VAVKPYGFFVDLGGISGLLHQSVITGGSLRSLREVFDHG 378
[121][TOP]
>UniRef100_Q2JN47 Putative ribosomal protein S1 n=1 Tax=Synechococcus sp.
JA-2-3B'a(2-13) RepID=Q2JN47_SYNJB
Length = 304
Score = 112 bits (279), Expect = 2e-23
Identities = 56/159 (35%), Positives = 95/159 (59%), Gaps = 2/159 (1%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
+I +++ + LS + ++ WE Q QA V ++ NKGGVV +V+GL+GF+
Sbjct: 86 LILREDAEGQIVLSARRLRLKRLWEELAQKQANGQTVTVPVIATNKGGVVVDVQGLRGFI 145
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAV-ADSQGQLGIGSVVTGSVQ 361
P S +S + EEL+ + + F+EV+ E ++L+LS R AV +++ + G VV G V
Sbjct: 146 PRSHLSQREGLEELVGQSLTASFIEVNPEANKLVLSQRAAVKSENLSRYTSGQVVEGKVS 205
Query: 362 SLKPYGAFIDI-GGISGLLHVSQISHDRITDISTVLQPG 475
LKP+G F+D+ G++GLLH+ Q+S + + + +PG
Sbjct: 206 GLKPFGVFVDLEEGVTGLLHIKQVSQSFVASLPDLFKPG 244
[122][TOP]
>UniRef100_A7NHV1 RNA binding S1 domain protein n=1 Tax=Roseiflexus castenholzii DSM
13941 RepID=A7NHV1_ROSCS
Length = 388
Score = 112 bits (279), Expect = 2e-23
Identities = 63/172 (36%), Positives = 98/172 (56%), Gaps = 18/172 (10%)
Frame = +2
Query: 14 ENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFS 193
EN D L LSL +Q WE +L AE +V+G+++ NKGG++ + ++GFVP S
Sbjct: 89 ENRQGD-LVLSLTMVQVARDWEEAARLSAEGGIVQGQVIGYNKGGLLVQFNRIRGFVPAS 147
Query: 194 QIST---KSTGEE-------LLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-------- 319
Q++ ++ EE ++ + IPLK +EVD +++RL+LS R A + +
Sbjct: 148 QVAQLHGRTAAEERQQALQRMVGQTIPLKVIEVDRDRNRLVLSERSATQEWRKAQKQRLL 207
Query: 320 GQLGIGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+L G ++TG V L +GAFID+GG GL H+S++S R+ VL PG
Sbjct: 208 TELQPGDILTGRVNQLTNFGAFIDLGGADGLAHISELSWQRVNHPREVLSPG 259
Score = 54.3 bits (129), Expect = 4e-06
Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 9/138 (6%)
Frame = +2
Query: 89 QLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE--ELLE--KEIPLKFV 256
+LQ D ++ G++ G ++ G G S++S + E+L +E+ + V
Sbjct: 209 ELQPGD-ILTGRVNQLTNFGAFIDLGGADGLAHISELSWQRVNHPREVLSPGQEVRVMVV 267
Query: 257 EVDEEQSRLILSHRKAVADSQGQL----GIGSVVTGSVQSLKPYGAFIDI-GGISGLLHV 421
E+D E+ R+ LS R+ + + +G +V+G V ++ P+GAF+ I + GL+H
Sbjct: 268 EIDAERERIGLSLRRLQPNPWDTIDQRYSLGQLVSGPVTNVAPFGAFVQIEEAVEGLIHA 327
Query: 422 SQISHDRITDISTVLQPG 475
S++ D +LQPG
Sbjct: 328 SELDADPQAQPRDLLQPG 345
[123][TOP]
>UniRef100_A5V175 RNA binding S1 domain protein n=1 Tax=Roseiflexus sp. RS-1
RepID=A5V175_ROSS1
Length = 393
Score = 112 bits (279), Expect = 2e-23
Identities = 63/172 (36%), Positives = 98/172 (56%), Gaps = 18/172 (10%)
Frame = +2
Query: 14 ENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFS 193
EN D L LSL +Q WE +L AE +V+G+++ NKGG++ + ++GFVP S
Sbjct: 89 ENRQGD-LVLSLTMVQVARDWEEAARLSAEGGIVQGQVIGYNKGGLLVQFNRIRGFVPAS 147
Query: 194 QIST---KSTGEE-------LLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-------- 319
Q++ ++ EE ++ + IPLK +EVD +++RL+LS R A + +
Sbjct: 148 QVAQLHGRTAAEERQQALQRMVGQTIPLKVIEVDRDRNRLVLSERSATQEWRKAQKQRLL 207
Query: 320 GQLGIGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+L G ++TG V L +GAFID+GG GL H+S++S R+ VL PG
Sbjct: 208 TELQPGDILTGRVNQLTNFGAFIDLGGADGLAHISELSWQRVNHPREVLSPG 259
Score = 54.3 bits (129), Expect = 4e-06
Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 9/138 (6%)
Frame = +2
Query: 89 QLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE--ELLE--KEIPLKFV 256
+LQ D ++ G++ G ++ G G S++S + E+L +E+ + V
Sbjct: 209 ELQPGD-ILTGRVNQLTNFGAFIDLGGADGLAHISELSWQRVNHPREVLSPGQEVRVMVV 267
Query: 257 EVDEEQSRLILSHRKAVADSQGQL----GIGSVVTGSVQSLKPYGAFIDI-GGISGLLHV 421
E+D E+ R+ LS R+ + + +G +V+G V ++ P+GAF+ I + GL+H
Sbjct: 268 EIDAERERIGLSLRRLQPNPWDTIDQRYSLGQLVSGPVTNVAPFGAFVQIEEAVEGLIHA 327
Query: 422 SQISHDRITDISTVLQPG 475
S++ D +LQPG
Sbjct: 328 SELDADPQAQPRDLLQPG 345
[124][TOP]
>UniRef100_C0CSC6 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica
DSM 10507 RepID=C0CSC6_9FIRM
Length = 301
Score = 111 bits (278), Expect = 2e-23
Identities = 70/169 (41%), Positives = 99/169 (58%), Gaps = 11/169 (6%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ +++ + + LS LAWE+ L+ E V+ I K GVVA VEG++GF
Sbjct: 75 MVMSKDDGNGNILLSKVEADDVLAWEKLNTLKEEQTVLDVVIKGVVKSGVVAYVEGVRGF 134
Query: 182 VPFSQISTKSTG--EELLEKEIPLKFVEVDEEQSRLILSHR---KAVADSQ-----GQLG 331
+P S++S EE L K I ++ EVD+E+ RLILS R K AD + +
Sbjct: 135 IPASKLSLSYVDNLEEYLNKPIQVRVFEVDKEKKRLILSAREILKEKADEERKAKISNVE 194
Query: 332 IGSVVTGSVQSLKPYGAFIDIG-GISGLLHVSQISHDRITDISTVLQPG 475
+G V G V+SL+PYGAFID+G G+SGL+H+SQIS RI S VL G
Sbjct: 195 VGLVTEGIVESLQPYGAFIDLGNGLSGLVHISQISEKRIKSCSQVLAVG 243
[125][TOP]
>UniRef100_B8G765 RNA binding S1 domain protein n=1 Tax=Chloroflexus aggregans DSM
9485 RepID=B8G765_CHLAD
Length = 397
Score = 110 bits (275), Expect = 5e-23
Identities = 64/177 (36%), Positives = 99/177 (55%), Gaps = 19/177 (10%)
Frame = +2
Query: 2 VIIGENES-DDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKG 178
V + E E+ D L LSL +Q WE QL + + + K++ NKGG++ + ++G
Sbjct: 84 VYVQEPENRDGDLILSLSMVQVAKDWEVAEQLFRDGGITRCKVIGFNKGGLLVQFNRIRG 143
Query: 179 FVPFSQIST---KSTGEE-------LLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG-- 322
FVP SQ++ ++ +E ++ +EIPLK +EVD E++RL+LS R A + +
Sbjct: 144 FVPASQVAQLHGRTAADERQYALQKMINQEIPLKVIEVDRERNRLVLSERAATQEWRKAQ 203
Query: 323 ------QLGIGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+L G V+ G V L +GAFID+GG GL H+S++S R+ VLQPG
Sbjct: 204 KHRLLTELQPGDVLVGKVNQLTNFGAFIDLGGADGLAHISELSWQRVNHPREVLQPG 260
Score = 58.5 bits (140), Expect = 2e-07
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 9/138 (6%)
Frame = +2
Query: 89 QLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE--ELLE--KEIPLKFV 256
+LQ D +V GK+ G ++ G G S++S + E+L+ +E+ + V
Sbjct: 210 ELQPGDVLV-GKVNQLTNFGAFIDLGGADGLAHISELSWQRVNHPREVLQPGQEVKVVVV 268
Query: 257 EVDEEQSRLILSHRKAVADSQGQLG----IGSVVTGSVQSLKPYGAFIDI-GGISGLLHV 421
E+D E+ R+ LS R+ + + +G +VTG V ++ P+GAF+ + + GL+H
Sbjct: 269 EIDRERERIGLSIRQLQDNPWETIDQRYTLGQLVTGPVTNVTPFGAFVQVEEAVEGLIHA 328
Query: 422 SQISHDRITDISTVLQPG 475
S+++ D VLQPG
Sbjct: 329 SELTADPQAQPRDVLQPG 346
[126][TOP]
>UniRef100_B4WHV6 S1 RNA binding domain protein n=1 Tax=Synechococcus sp. PCC 7335
RepID=B4WHV6_9SYNE
Length = 206
Score = 110 bits (275), Expect = 5e-23
Identities = 50/103 (48%), Positives = 76/103 (73%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I+ ++ D L LS++ I++ AWER RQLQ EDA V+ + N+GG + +EGL+GF+
Sbjct: 86 ILTDDNEDGQLTLSIRRIEYMRAWERVRQLQQEDATVRSLVFATNRGGALVRIEGLRGFI 145
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD 313
P S IST+ E+L+ +E+PLKF+EVDEE++RL+LSHR+A+ +
Sbjct: 146 PGSHISTRKPKEDLVGEELPLKFLEVDEERNRLVLSHRRALVE 188
[127][TOP]
>UniRef100_A9WF65 RNA binding S1 domain protein n=2 Tax=Chloroflexus
RepID=A9WF65_CHLAA
Length = 391
Score = 109 bits (273), Expect = 8e-23
Identities = 63/177 (35%), Positives = 98/177 (55%), Gaps = 19/177 (10%)
Frame = +2
Query: 2 VIIGENES-DDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKG 178
V + E E+ D L LSL +Q WE QL + + + K++ NKGG++ + ++G
Sbjct: 84 VYVQEPENRDGDLILSLSMVQVAKDWEVAEQLFHDGGITRCKVIGFNKGGLLVQFNRIRG 143
Query: 179 FVPFSQIST----------KSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG-- 322
FVP SQ++ + ++++ +EIPLK +EVD E++RL+LS R A + +
Sbjct: 144 FVPSSQVAQLHGRTAADERQQALQKMVNQEIPLKVIEVDRERNRLVLSERAATQEWRKAQ 203
Query: 323 ------QLGIGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+L G V+ G V L +GAFID+GG GL H+S++S R+ VLQPG
Sbjct: 204 KHRLLTELQPGDVLVGRVNQLTNFGAFIDLGGADGLAHISELSWQRVNHPREVLQPG 260
Score = 56.6 bits (135), Expect = 8e-07
Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 9/138 (6%)
Frame = +2
Query: 89 QLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE--ELLE--KEIPLKFV 256
+LQ D +V G++ G ++ G G S++S + E+L+ +E+ + V
Sbjct: 210 ELQPGDVLV-GRVNQLTNFGAFIDLGGADGLAHISELSWQRVNHPREVLQPGQEVKVVVV 268
Query: 257 EVDEEQSRLILSHRKAVADSQGQLG----IGSVVTGSVQSLKPYGAFIDI-GGISGLLHV 421
E+D E+ R+ LS R+ + + +G +VTG V ++ P+GAF+ + + GL+H
Sbjct: 269 EIDRERERIGLSIRQLQNNPWETIDQRYTLGQLVTGPVTNVTPFGAFVQVEEAVEGLIHA 328
Query: 422 SQISHDRITDISTVLQPG 475
S++ D +LQPG
Sbjct: 329 SELDADPQAQPRDILQPG 346
[128][TOP]
>UniRef100_A3Z5H4 30S ribosomal protein S1-like B, putative n=1 Tax=Synechococcus sp.
RS9917 RepID=A3Z5H4_9SYNE
Length = 432
Score = 109 bits (273), Expect = 8e-23
Identities = 53/159 (33%), Positives = 97/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E +D + +S +++ +W++ ++L+ + VV+ I N+GGV ++EGL+GF
Sbjct: 213 LVTREQNADGMVTISCRALALRKSWDKVKELEKQGKVVQVTISGFNRGGVTCDLEGLRGF 272
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P S + E L+ K + + F+EV+ E +L+LS ++A ++ +L +G +V G+V
Sbjct: 273 IPRSHLQDGENHEALVGKTLGVAFLEVNAETRKLVLSEKRAATAARFAELEVGQLVEGTV 332
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG F+D+GGISGLLH S I+ + + V G
Sbjct: 333 VAVKPYGFFVDLGGISGLLHQSMITGGSMRSLREVFDQG 371
[129][TOP]
>UniRef100_O33698 30S ribosomal protein S1 n=2 Tax=Synechococcus elongatus
RepID=RS1_SYNE7
Length = 295
Score = 109 bits (273), Expect = 8e-23
Identities = 52/159 (32%), Positives = 94/159 (59%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++I + D + +SL+++ AW R +LQ V+ K+ +NKGGV A++EGL+ F
Sbjct: 81 LVIRDQNEDGQVTVSLRALALEQAWTRVAELQEGGQTVQVKVTGSNKGGVTADLEGLRAF 140
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADS-QGQLGIGSVVTGSV 358
+P S ++ K + L K + + F+EV+ +L+LS R+A + ++ +G ++ G V
Sbjct: 141 IPRSHLNEKEDLDSLKGKTLTVAFLEVNRADKKLVLSERQAARTALVREIEVGQLINGKV 200
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
LKP+G F+D+GG + LL ++QIS + D+ + + G
Sbjct: 201 TGLKPFGVFVDLGGATALLPINQISQKFVADVGAIFKIG 239
[130][TOP]
>UniRef100_B1X5T4 30S ribosomal protein S1-like B, putative n=1 Tax=Paulinella
chromatophora RepID=B1X5T4_PAUCH
Length = 368
Score = 109 bits (272), Expect = 1e-22
Identities = 54/159 (33%), Positives = 96/159 (60%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++I E +D + +S +++ +WE+ QL+ + V+ K+ N+GG+ E+EGL+GF
Sbjct: 149 LVIREQNADGIITISARALALHQSWEKLIQLEKDGDSVQVKVNGFNRGGLTCELEGLRGF 208
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P SQ+ E+++ K I +EV+ +LILS ++A ++ QL IG ++ G V
Sbjct: 209 IPCSQLQDGENYEKMVGKTIRAALIEVNSSSQKLILSEKRATTATRFAQLQIGQLIEGQV 268
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+KPYG F+DIG I+GLLH S I++ + + + + + G
Sbjct: 269 TVVKPYGFFVDIGSINGLLHYSCITNGNLREPNKIFKQG 307
[131][TOP]
>UniRef100_P74142 30S ribosomal protein S1 homolog B n=1 Tax=Synechocystis sp. PCC
6803 RepID=RS1B_SYNY3
Length = 305
Score = 109 bits (272), Expect = 1e-22
Identities = 50/159 (31%), Positives = 95/159 (59%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ E + + LS + +Q +WE +L+ ++ + NKGGVV +VEGL+GF
Sbjct: 82 LVTSEQNDEGQVRLSRRQLQIQQSWENLAELEESGKTLEMVVTGTNKGGVVGDVEGLRGF 141
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRK-AVADSQGQLGIGSVVTGSV 358
+P S + K + L+ + + +E +++ ++L+L+ R+ A+S G++ G++ G V
Sbjct: 142 IPRSHLMHKDNMDALVGQVLKAHILEANQDNNKLVLTQRRIQQAESMGKIAAGNIYEGKV 201
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++PYG F++I G++GLLHVSQ+S R+ ++T+ G
Sbjct: 202 AKIQPYGVFVEIEGVTGLLHVSQVSGTRVDSLNTLFAFG 240
[132][TOP]
>UniRef100_C5RC60 Ribosomal protein S1 n=1 Tax=Weissella paramesenteroides ATCC 33313
RepID=C5RC60_WEIPA
Length = 405
Score = 108 bits (270), Expect = 2e-22
Identities = 58/166 (34%), Positives = 94/166 (56%), Gaps = 10/166 (6%)
Frame = +2
Query: 8 IGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVP 187
IG ++ + LS + ++ AWE + D +V+ + A KGG+V +VEG++GFVP
Sbjct: 81 IGSDKEGGSYLLSKRRLEARRAWEEIASKHSVDDIVEAPVTQAVKGGLVVDVEGVRGFVP 140
Query: 188 FSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLGIG 337
S I + + + + I K +E++ SRLILS R + + + +L +G
Sbjct: 141 ASMIENRFVQDLNQYKGQTIRAKIIEINAADSRLILSRRDVLNEERSAALARIFDELSVG 200
Query: 338 SVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
V+ G V + +GAFID+GG+ GL+HVS+ISH+R++ S VL G
Sbjct: 201 DVIEGKVARMTNFGAFIDLGGVDGLVHVSEISHERVSQPSDVLSVG 246
Score = 64.7 bits (156), Expect = 3e-09
Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 12/169 (7%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSI---QFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLK 175
II N +D L LS + + + A R + V++GK+ G ++ G+
Sbjct: 164 IIEINAADSRLILSRRDVLNEERSAALARIFDELSVGDVIEGKVARMTNFGAFIDLGGVD 223
Query: 176 GFVPFSQISTKSTGEEL----LEKEIPLKFVEVDEEQSRLILSHRKAVAD----SQGQLG 331
G V S+IS + + + +E+ +K + +D E+ R+ LS + + +
Sbjct: 224 GLVHVSEISHERVSQPSDVLSVGEEVKVKVLGLDPERERISLSIKATQPGPWDAAAEKAP 283
Query: 332 IGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDRITDISTVLQPG 475
G+V+ G+V+ + +GAF+++ G+ GL+HVSQISH I + S VL+ G
Sbjct: 284 AGTVLEGTVKRVVDFGAFVEVFPGVEGLVHVSQISHKHIANPSDVLKAG 332
[133][TOP]
>UniRef100_A9B766 RNA binding S1 domain protein n=1 Tax=Herpetosiphon aurantiacus
ATCC 23779 RepID=A9B766_HERA2
Length = 397
Score = 108 bits (269), Expect = 2e-22
Identities = 67/177 (37%), Positives = 100/177 (56%), Gaps = 19/177 (10%)
Frame = +2
Query: 2 VIIGENESDD-TLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKG 178
V + E ES + L LSL +Q W+ + + +++ +V NKGG++ +V ++G
Sbjct: 80 VYVMEPESKEGELVLSLNMVQVERDWQEAQTMLENGQIIEAGVVGYNKGGLLVQVGRVRG 139
Query: 179 FVPFSQIST--KSTGEE--------LLEKEIPLKFVEVDEEQSRLILSHRKAVA---DSQ 319
FVP SQ+ TG E ++ + IPLK +EVD +++RL+LS R A+ SQ
Sbjct: 140 FVPASQVVNLHSRTGTEGQQSAMTKMVGQNIPLKVIEVDRDRNRLVLSERAAMQRWRQSQ 199
Query: 320 GQ-----LGIGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+ L G+VVTG V L P+GAFID+GG GL H+S++S R+ VLQPG
Sbjct: 200 KERLLETLEPGAVVTGRVNQLTPFGAFIDLGGADGLAHISELSWQRVNHPREVLQPG 256
[134][TOP]
>UniRef100_P50889 40S ribosomal protein S1 n=1 Tax=Leuconostoc lactis RepID=RS1_LEULA
Length = 429
Score = 107 bits (267), Expect = 4e-22
Identities = 65/172 (37%), Positives = 98/172 (56%), Gaps = 14/172 (8%)
Frame = +2
Query: 2 VIIGENESDD---TLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGL 172
V+I SD LS K + AWE AE V K++NA +GG++ +V G+
Sbjct: 109 VVISNVTSDKEGVAYLLSKKRLDARKAWENLSF--AEGDTVDAKVINAVRGGLIVDVNGV 166
Query: 173 KGFVPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ--------- 319
+GFVP S ++ + + + K+I + +E+D +RLILS RKAVA +
Sbjct: 167 RGFVPASMVAERFVSDLNQFKNKDIKAQVIEIDPANARLILS-RKAVAAQELAAQLAEVF 225
Query: 320 GQLGIGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+L +G VV G+V L +GAF+D+GG+ GL+HVS+ISHDR+ + + VL G
Sbjct: 226 SKLSVGEVVEGTVARLTDFGAFVDLGGVDGLVHVSEISHDRVKNPADVLTKG 277
Score = 68.9 bits (167), Expect = 2e-10
Identities = 46/131 (35%), Positives = 76/131 (58%), Gaps = 9/131 (6%)
Frame = +2
Query: 110 VVKGKIVNANKGGVVAEVEGLKGFVPFSQIS---TKSTGEELLEKE-IPLKFVEVDEEQS 277
VV+G + G ++ G+ G V S+IS K+ + L + + + +K + +D E+
Sbjct: 233 VVEGTVARLTDFGAFVDLGGVDGLVHVSEISHDRVKNPADVLTKGDKVDVKILALDTEKG 292
Query: 278 RLILS----HRKAVADSQGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDR 442
R+ LS R ++ Q+ GSV+ G+V+ +K +GAF++I GI GL+HVSQIS+ R
Sbjct: 293 RISLSIKATQRGPWDEAADQIAAGSVLEGTVKRVKDFGAFVEILPGIEGLVHVSQISNKR 352
Query: 443 ITDISTVLQPG 475
I + S VL+ G
Sbjct: 353 IENPSEVLKSG 363
[135][TOP]
>UniRef100_B4W413 S1 RNA binding domain protein n=1 Tax=Microcoleus chthonoplastes
PCC 7420 RepID=B4W413_9CYAN
Length = 299
Score = 107 bits (266), Expect = 5e-22
Identities = 47/159 (29%), Positives = 97/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+II E ++ + LS + ++ W++ Q+Q ++ ++ NKGGV + +GL+GF
Sbjct: 87 LIIREQNAEGQITLSRRQLEINKIWDQLAQVQDSGKSLQVQVTGVNKGGVTIDWQGLRGF 146
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAV-ADSQGQLGIGSVVTGSV 358
+P S ++ + E L+ + + + +E D ++S+L+ S R+A A S L +G +V G+V
Sbjct: 147 IPRSHLNQRGNLESLIGQSLTVSILEADRDRSKLVFSQREATRAASFSMLEVGQLVEGTV 206
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+++P+G F+++ GI+GLLH+ Q+S + + ++ + + G
Sbjct: 207 SNIRPFGVFVELEGITGLLHIKQVSQNMVESLTDMFEVG 245
[136][TOP]
>UniRef100_Q03WN3 SSU ribosomal protein S1P n=1 Tax=Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293 RepID=Q03WN3_LEUMM
Length = 396
Score = 106 bits (265), Expect = 7e-22
Identities = 65/172 (37%), Positives = 99/172 (57%), Gaps = 14/172 (8%)
Frame = +2
Query: 2 VIIGENESDD---TLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGL 172
V+I SD + LS K ++ AWE E V K++NA +GG+V +V G+
Sbjct: 75 VVISNVTSDKEGVSYLLSKKRLEARKAWENLSF--GEGDTVDAKVINAVRGGLVVDVNGV 132
Query: 173 KGFVPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG-------- 322
+GFVP S ++ + + + K+I + +E+D ++RLILS RKAVA +
Sbjct: 133 RGFVPASMVADRFVSDLNQFKNKDIKAQVIEIDAAKARLILS-RKAVAAQERAAQLAEAF 191
Query: 323 -QLGIGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+L +G VV G V L +GAF+D+GG+ GL+HVS+ISHDR+ + + VL G
Sbjct: 192 EKLSVGEVVEGKVARLTDFGAFVDLGGVDGLVHVSEISHDRVKNPADVLTKG 243
Score = 69.7 bits (169), Expect = 1e-10
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 15/162 (9%)
Frame = +2
Query: 35 LFLSLKSIQFGLAWERCRQLQ------AEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQ 196
L LS K++ A ER QL + VV+GK+ G ++ G+ G V S+
Sbjct: 171 LILSRKAVA---AQERAAQLAEAFEKLSVGEVVEGKVARLTDFGAFVDLGGVDGLVHVSE 227
Query: 197 IS---TKSTGEELLEKE-IPLKFVEVDEEQSRLILSHRKAVADSQGQLG----IGSVVTG 352
IS K+ + L + E + +K + +D E+ R+ LS + ++ G+V+ G
Sbjct: 228 ISHDRVKNPADVLTKGETVNVKILALDAEKGRISLSIKATQPGPWDKVAEEAPAGTVLEG 287
Query: 353 SVQSLKPYGAFIDI-GGISGLLHVSQISHDRITDISTVLQPG 475
+V+ +K +GAF++I GI GL+HVSQISH RI + S VL+ G
Sbjct: 288 TVKRVKDFGAFVEIFPGIEGLVHVSQISHKRIENPSEVLKSG 329
[137][TOP]
>UniRef100_C0ME65 Putative 30S ribosomal protein S1 n=1 Tax=Steptococcus equi subsp.
zooepidemicus H70 RepID=C0ME65_STRS7
Length = 400
Score = 106 bits (265), Expect = 7e-22
Identities = 62/167 (37%), Positives = 95/167 (56%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EGL+GF+
Sbjct: 76 VVGKDTDTVTFLVSKKRLEARKAWDKLIGREGEVVTVKG--TRAVKGGLSVEFEGLRGFI 133
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQ--------LGI 334
P S I T+ E+ + +E K EVD ++R ILS R+ V ++ Q L
Sbjct: 134 PASMIDTRFVRNTEKFVGQEFDAKIKEVDAAENRFILSRREVVEEAAKQARDKVFSTLSE 193
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
GSVVTG+V L +GAFID+GG+ GL+HV+++SH+R +V+ G
Sbjct: 194 GSVVTGTVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVG 240
Score = 63.2 bits (152), Expect = 9e-09
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 14/140 (10%)
Frame = +2
Query: 98 AEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTK---------STGEELLEKEIPLK 250
+E +VV G + G ++ G+ G V +++S + S GEE + +K
Sbjct: 192 SEGSVVTGTVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVGEE-----VEVK 246
Query: 251 FVEVDEEQSRLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLL 415
+ +DEE R+ LS + + +L G V+ G V+ L +GAF+++ GI GL+
Sbjct: 247 VLALDEEAGRVSLSLKATTPGPWDGVEQKLAQGDVIEGKVKRLTDFGAFVEVLPGIDGLV 306
Query: 416 HVSQISHDRITDISTVLQPG 475
H+SQISH R+ + VL G
Sbjct: 307 HISQISHKRVENPKDVLTVG 326
[138][TOP]
>UniRef100_C0M7J1 Putative 30S ribosomal protein S1 n=1 Tax=Streptococcus equi subsp.
equi 4047 RepID=C0M7J1_STRE4
Length = 400
Score = 106 bits (265), Expect = 7e-22
Identities = 62/167 (37%), Positives = 95/167 (56%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EGL+GF+
Sbjct: 76 VVGKDTDTVTFLVSKKRLEARKAWDKLIGREGEVVTVKG--TRAVKGGLSVEFEGLRGFI 133
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQ--------LGI 334
P S I T+ E+ + +E K EVD ++R ILS R+ V ++ Q L
Sbjct: 134 PASMIDTRFVRNTEKFVGQEFDAKIKEVDAAENRFILSRREVVEEAAKQARDKVFSTLSE 193
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
GSVVTG+V L +GAFID+GG+ GL+HV+++SH+R +V+ G
Sbjct: 194 GSVVTGTVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVG 240
Score = 63.2 bits (152), Expect = 9e-09
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 14/140 (10%)
Frame = +2
Query: 98 AEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTK---------STGEELLEKEIPLK 250
+E +VV G + G ++ G+ G V +++S + S GEE + +K
Sbjct: 192 SEGSVVTGTVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVGEE-----VEVK 246
Query: 251 FVEVDEEQSRLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLL 415
+ +DEE R+ LS + + +L G V+ G V+ L +GAF+++ GI GL+
Sbjct: 247 VLALDEEAGRVSLSLKATTPGPWDGVEQKLAQGDVIEGKVKRLTDFGAFVEVLPGIDGLV 306
Query: 416 HVSQISHDRITDISTVLQPG 475
H+SQISH R+ + VL G
Sbjct: 307 HISQISHKRVENPKDVLTVG 326
[139][TOP]
>UniRef100_B4U3C6 SSU ribosomal protein Rps1 n=1 Tax=Streptococcus equi subsp.
zooepidemicus MGCS10565 RepID=B4U3C6_STREM
Length = 400
Score = 106 bits (265), Expect = 7e-22
Identities = 62/167 (37%), Positives = 95/167 (56%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EGL+GF+
Sbjct: 76 VVGKDTDTVTFLVSKKRLEARKAWDKLIGREGEVVTVKG--TRAVKGGLSVEFEGLRGFI 133
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQ--------LGI 334
P S I T+ E+ + +E K EVD ++R ILS R+ V ++ Q L
Sbjct: 134 PASMIDTRFVRNTEKFVGQEFDAKIKEVDAAENRFILSRREVVEEAAKQARDKVFSTLSE 193
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
GSVVTG+V L +GAFID+GG+ GL+HV+++SH+R +V+ G
Sbjct: 194 GSVVTGTVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVG 240
Score = 62.0 bits (149), Expect = 2e-08
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 14/140 (10%)
Frame = +2
Query: 98 AEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTK---------STGEELLEKEIPLK 250
+E +VV G + G ++ G+ G V +++S + S GEE + +K
Sbjct: 192 SEGSVVTGTVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVGEE-----VEVK 246
Query: 251 FVEVDEEQSRLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLL 415
+ +DEE R+ LS + + +L G V+ G V+ L +GAF+++ GI GL+
Sbjct: 247 VLALDEEAGRVSLSLKATTPGPWDGVEQKLAQGDVIEGKVKRLTDFGAFVEVLPGIDGLV 306
Query: 416 HVSQISHDRITDISTVLQPG 475
H+SQISH R+ + +L G
Sbjct: 307 HISQISHKRVENPKDMLTVG 326
[140][TOP]
>UniRef100_Q3DQC8 30S ribosomal protein S1 n=4 Tax=Streptococcus agalactiae
RepID=Q3DQC8_STRAG
Length = 466
Score = 106 bits (265), Expect = 7e-22
Identities = 61/167 (36%), Positives = 94/167 (56%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EGL+GF+
Sbjct: 142 VVGKDTDTVTFLVSKKRLEARKAWDKLVGREGEVVTVKG--TRAVKGGLSVEFEGLRGFI 199
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLGI 334
P S I T+ E+ + +E K EVD ++R ILS R+ V +S + +
Sbjct: 200 PASMIDTRFVRNTEKFVGQEFDAKIKEVDAAENRFILSRREVVEESAAAARKEVFSNIEV 259
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
GSVVTG V L +GAFID+GG+ GL+HV+++SH+R +V+ G
Sbjct: 260 GSVVTGKVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVTVG 306
Score = 66.2 bits (160), Expect = 1e-09
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Frame = +2
Query: 107 AVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGEE----LLEKEIPLKFVEVDEEQ 274
+VV GK+ G ++ G+ G V +++S + + +E+ +K + +DEE
Sbjct: 261 SVVTGKVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVTVGEEVEVKVLSIDEEA 320
Query: 275 SRLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHD 439
R+ LS + + +L G V+ G V+ L +GAF+++ GI GL+H+SQISH
Sbjct: 321 GRVSLSLKATTPGPWDGVEQKLAAGDVIEGKVKRLTDFGAFVEVLPGIDGLVHISQISHK 380
Query: 440 RITDISTVLQPG 475
R+ + VL G
Sbjct: 381 RVENPKDVLSAG 392
[141][TOP]
>UniRef100_Q3DIK4 Ribosomal protein S1 (Fragment) n=1 Tax=Streptococcus agalactiae
515 RepID=Q3DIK4_STRAG
Length = 339
Score = 106 bits (265), Expect = 7e-22
Identities = 61/167 (36%), Positives = 94/167 (56%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EGL+GF+
Sbjct: 15 VVGKDTDTVTFLVSKKRLEARKAWDKLVGREGEVVTVKG--TRAVKGGLSVEFEGLRGFI 72
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLGI 334
P S I T+ E+ + +E K EVD ++R ILS R+ V +S + +
Sbjct: 73 PASMIDTRFVRNTEKFVGQEFDAKIKEVDAAENRFILSRREVVEESAAAARKEVFSNIEV 132
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
GSVVTG V L +GAFID+GG+ GL+HV+++SH+R +V+ G
Sbjct: 133 GSVVTGKVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVTVG 179
Score = 66.2 bits (160), Expect = 1e-09
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Frame = +2
Query: 107 AVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGEE----LLEKEIPLKFVEVDEEQ 274
+VV GK+ G ++ G+ G V +++S + + +E+ +K + +DEE
Sbjct: 134 SVVTGKVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVTVGEEVEVKVLSIDEEA 193
Query: 275 SRLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHD 439
R+ LS + + +L G V+ G V+ L +GAF+++ GI GL+H+SQISH
Sbjct: 194 GRVSLSLKATTPGPWDGVEQKLAAGDVIEGKVKRLTDFGAFVEVLPGIDGLVHISQISHK 253
Query: 440 RITDISTVLQPG 475
R+ + VL G
Sbjct: 254 RVENPKDVLSAG 265
[142][TOP]
>UniRef100_Q3DBV7 Ribosomal protein S1 (Fragment) n=1 Tax=Streptococcus agalactiae
CJB111 RepID=Q3DBV7_STRAG
Length = 332
Score = 106 bits (265), Expect = 7e-22
Identities = 61/167 (36%), Positives = 94/167 (56%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EGL+GF+
Sbjct: 8 VVGKDTDTVTFLVSKKRLEARKAWDKLVGREGEVVTVKG--TRAVKGGLSVEFEGLRGFI 65
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLGI 334
P S I T+ E+ + +E K EVD ++R ILS R+ V +S + +
Sbjct: 66 PASMIDTRFVRNTEKFVGQEFDAKIKEVDAAENRFILSRREVVEESAAAARKEVFSNIEV 125
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
GSVVTG V L +GAFID+GG+ GL+HV+++SH+R +V+ G
Sbjct: 126 GSVVTGKVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVTVG 172
Score = 66.2 bits (160), Expect = 1e-09
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Frame = +2
Query: 107 AVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGEE----LLEKEIPLKFVEVDEEQ 274
+VV GK+ G ++ G+ G V +++S + + +E+ +K + +DEE
Sbjct: 127 SVVTGKVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVTVGEEVEVKVLSIDEEA 186
Query: 275 SRLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHD 439
R+ LS + + +L G V+ G V+ L +GAF+++ GI GL+H+SQISH
Sbjct: 187 GRVSLSLKATTPGPWDGVEQKLAAGDVIEGKVKRLTDFGAFVEVLPGIDGLVHISQISHK 246
Query: 440 RITDISTVLQPG 475
R+ + VL G
Sbjct: 247 RVENPKDVLSAG 258
[143][TOP]
>UniRef100_Q3CZY2 Ribosomal protein S1 n=1 Tax=Streptococcus agalactiae H36B
RepID=Q3CZY2_STRAG
Length = 358
Score = 106 bits (265), Expect = 7e-22
Identities = 61/167 (36%), Positives = 94/167 (56%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EGL+GF+
Sbjct: 32 VVGKDTDTVTFLVSKKRLEARKAWDKLVGREGEVVTVKG--TRAVKGGLSVEFEGLRGFI 89
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLGI 334
P S I T+ E+ + +E K EVD ++R ILS R+ V +S + +
Sbjct: 90 PASMIDTRFVRNTEKFVGQEFDAKIKEVDAAENRFILSRREVVEESAAAARKEVFSNIEV 149
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
GSVVTG V L +GAFID+GG+ GL+HV+++SH+R +V+ G
Sbjct: 150 GSVVTGKVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVTVG 196
Score = 66.2 bits (160), Expect = 1e-09
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Frame = +2
Query: 107 AVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGEE----LLEKEIPLKFVEVDEEQ 274
+VV GK+ G ++ G+ G V +++S + + +E+ +K + +DEE
Sbjct: 151 SVVTGKVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVTVGEEVEVKVLSIDEEA 210
Query: 275 SRLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHD 439
R+ LS + + +L G V+ G V+ L +GAF+++ GI GL+H+SQISH
Sbjct: 211 GRVSLSLKATTPGPWDGVEQKLAAGDVIEGKVKRLTDFGAFVEVLPGIDGLVHISQISHK 270
Query: 440 RITDISTVLQPG 475
R+ + VL G
Sbjct: 271 RVENPKDVLSAG 282
[144][TOP]
>UniRef100_Q5WGU6 30S ribosomal protein S1 n=1 Tax=Bacillus clausii KSM-K16
RepID=Q5WGU6_BACSK
Length = 384
Score = 106 bits (264), Expect = 9e-22
Identities = 60/161 (37%), Positives = 95/161 (59%), Gaps = 11/161 (6%)
Frame = +2
Query: 26 DDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQIST 205
DD L LS K++Q AWE+ + + V++ ++ KGG+V +V G++GF+P S +
Sbjct: 77 DDELILSKKAVQAEKAWEQLEEAYEKGEVIEAEVAEVVKGGLVVDV-GVRGFIPASLVER 135
Query: 206 KSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQ---------LGIGSVVTG 352
+ + K + LK E+D++ ++LILS R AV D++ + L G VV G
Sbjct: 136 HYVEDFSDYKGKPLRLKVTEIDKDNNKLILSQR-AVLDAEIEEKKKQVLHSLSTGDVVEG 194
Query: 353 SVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
VQ L +GAF+D+GG+ GL+H+SQI+H+R+ S VL G
Sbjct: 195 KVQRLTSFGAFVDVGGVDGLVHISQIAHERVEHPSDVLSEG 235
Score = 67.4 bits (163), Expect = 5e-10
Identities = 44/131 (33%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Frame = +2
Query: 110 VVKGKIVNANKGGVVAEVEGLKGFVPFSQIS---TKSTGEELLE-KEIPLKFVEVDEEQS 277
VV+GK+ G +V G+ G V SQI+ + + L E +E+ +K + VD +
Sbjct: 191 VVEGKVQRLTSFGAFVDVGGVDGLVHISQIAHERVEHPSDVLSEGQEVRVKVLSVDPDSE 250
Query: 278 RLILSHRKAVA----DSQGQLGIGSVVTGSVQSLKPYGAFIDIG-GISGLLHVSQISHDR 442
R+ LS ++ +A + + + G +VTG+V+ L +GAF++I G+ GL+H+SQIS
Sbjct: 251 RVSLSIKEMLAGPWENIESKFSAGDIVTGTVKRLVSFGAFVEIAPGVEGLVHISQISKRH 310
Query: 443 ITDISTVLQPG 475
I VL+ G
Sbjct: 311 IGTPQEVLEEG 321
[145][TOP]
>UniRef100_C2KJ42 Ribosomal protein S1 n=1 Tax=Leuconostoc mesenteroides subsp.
cremoris ATCC 19254 RepID=C2KJ42_LEUMC
Length = 396
Score = 106 bits (264), Expect = 9e-22
Identities = 64/172 (37%), Positives = 99/172 (57%), Gaps = 14/172 (8%)
Frame = +2
Query: 2 VIIGENESDD---TLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGL 172
V+I SD + LS K ++ AWE E V K++NA +GG+V +V G+
Sbjct: 75 VVISNVTSDKEGVSYLLSKKRLEARKAWENLSF--GEGDTVDAKVINAVRGGLVVDVNGV 132
Query: 173 KGFVPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG-------- 322
+GFVP S ++ + + + K+I + +E+D ++RLILS RKAVA +
Sbjct: 133 RGFVPASMVADRFVSDLNQFKNKDIKAQVIEIDAAKARLILS-RKAVAAQERAAQLAEAF 191
Query: 323 -QLGIGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+L +G VV G V L +GAF+D+GG+ GL+H+S+ISHDR+ + + VL G
Sbjct: 192 EKLSVGEVVEGKVARLTDFGAFVDLGGVDGLVHISEISHDRVKNPADVLTKG 243
Score = 70.1 bits (170), Expect = 7e-11
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 15/162 (9%)
Frame = +2
Query: 35 LFLSLKSIQFGLAWERCRQLQ------AEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQ 196
L LS K++ A ER QL + VV+GK+ G ++ G+ G V S+
Sbjct: 171 LILSRKAVA---AQERAAQLAEAFEKLSVGEVVEGKVARLTDFGAFVDLGGVDGLVHISE 227
Query: 197 IS---TKSTGEELLEKE-IPLKFVEVDEEQSRLILSHRKAVADSQGQLG----IGSVVTG 352
IS K+ + L + E + +K + +D E+ R+ LS + ++ G+V+ G
Sbjct: 228 ISHDRVKNPADVLTKGETVNVKILALDAEKGRISLSIKATQPGPWDKVAEEAPAGTVLEG 287
Query: 353 SVQSLKPYGAFIDI-GGISGLLHVSQISHDRITDISTVLQPG 475
+V+ +K +GAF++I GI GL+HVSQISH RI + S VL+ G
Sbjct: 288 TVKRVKDFGAFVEIFPGIEGLVHVSQISHKRIENPSEVLKSG 329
[146][TOP]
>UniRef100_A0YL26 RNA binding S1 n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YL26_9CYAN
Length = 295
Score = 106 bits (264), Expect = 9e-22
Identities = 46/159 (28%), Positives = 94/159 (59%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++I E ++ + LS++ ++ W+R + Q + + ++ N+GGV + + L+GF
Sbjct: 81 LVIREQNAEGQVLLSIRQLELEKVWDRLNESQQQAQSFQVRVTGMNRGGVTVDFDSLRGF 140
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSV 358
+P S +S K L+++ + + +E+D ++++L+ S R A S GQL +G ++ G V
Sbjct: 141 IPRSHLSEKEDLNSLIDQLLTVHILELDRDRNKLVFSQRLASESVSFGQLEVGQLIEGKV 200
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
S+KP+G F+D+ G++GL+H+ ++S I + T+ G
Sbjct: 201 SSVKPFGVFVDLDGVTGLIHIKEVSQKYIESLPTLFPVG 239
[147][TOP]
>UniRef100_C6GTI4 Putative 30S ribosomal protein S1 n=1 Tax=Streptococcus suis BM407
RepID=C6GTI4_STRS4
Length = 401
Score = 105 bits (263), Expect = 1e-21
Identities = 58/156 (37%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E+ VV K+ A KGG+ E EGL+GF+
Sbjct: 76 VVGKDTDTVTYLVSKKRLEARKAWDKL--VGREEEVVTVKVTRAVKGGLAVEFEGLRGFI 133
Query: 185 PFSQISTKSTG--EELLEKEIPLKFVEVDEEQSRLILSHRKAV--------ADSQGQLGI 334
P S I ++ T E + +E K EVD ++R ILS R V A+ G+L +
Sbjct: 134 PASMIDSRFTRNTERFVGQEFDAKIKEVDPAENRFILSRRDVVEAAAAAARAEVFGKLAV 193
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDR 442
G VVTG V + +GAFID+GG+ GL+H++++SH+R
Sbjct: 194 GEVVTGKVARITSFGAFIDLGGVDGLVHLTELSHER 229
Score = 60.8 bits (146), Expect = 4e-08
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Frame = +2
Query: 110 VVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKST----GEELLEKEIPLKFVEVDEEQS 277
VV GK+ G ++ G+ G V +++S + + +E+ +K + +DE +
Sbjct: 196 VVTGKVARITSFGAFIDLGGVDGLVHLTELSHERNVSPKSAVTVGEEVEVKVLAIDEVEG 255
Query: 278 RLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDR 442
R+ LS + + +L G V+ G V+ L +GAF+++ GI GL+H+SQISH R
Sbjct: 256 RVSLSLKATQPGPWDGVEQKLVAGDVIEGKVKRLTDFGAFVEVLPGIDGLVHISQISHKR 315
Query: 443 ITDISTVLQPG 475
+ + L G
Sbjct: 316 VENPKDALSVG 326
[148][TOP]
>UniRef100_C5VVU1 Putative 30S ribosomal protein S1 n=2 Tax=Streptococcus suis
RepID=C5VVU1_STRSE
Length = 401
Score = 105 bits (263), Expect = 1e-21
Identities = 58/156 (37%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E+ VV K+ A KGG+ E EGL+GF+
Sbjct: 76 VVGKDTDTVTYLVSKKRLEARKAWDKL--VGREEEVVTVKVTRAVKGGLAVEFEGLRGFI 133
Query: 185 PFSQISTKSTG--EELLEKEIPLKFVEVDEEQSRLILSHRKAV--------ADSQGQLGI 334
P S I ++ T E + +E K EVD ++R ILS R V A+ G+L +
Sbjct: 134 PASMIDSRFTRNTERFVGQEFDAKIKEVDPAENRFILSRRDVVEAAAAAARAEVFGKLAV 193
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDR 442
G VVTG V + +GAFID+GG+ GL+H++++SH+R
Sbjct: 194 GEVVTGKVARITSFGAFIDLGGVDGLVHLTELSHER 229
Score = 60.8 bits (146), Expect = 4e-08
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Frame = +2
Query: 110 VVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKST----GEELLEKEIPLKFVEVDEEQS 277
VV GK+ G ++ G+ G V +++S + + +E+ +K + +DE +
Sbjct: 196 VVTGKVARITSFGAFIDLGGVDGLVHLTELSHERNVSPKSAVTVGEEVEVKVLAIDEVEG 255
Query: 278 RLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDR 442
R+ LS + + +L G V+ G V+ L +GAF+++ GI GL+H+SQISH R
Sbjct: 256 RVSLSLKATQPGPWDGVEQKLVAGDVIEGKVKRLTDFGAFVEVLPGIDGLVHISQISHKR 315
Query: 443 ITDISTVLQPG 475
+ + L G
Sbjct: 316 VENPKDALSVG 326
[149][TOP]
>UniRef100_B1MYB4 40S ribosomal protein S1 n=1 Tax=Leuconostoc citreum KM20
RepID=B1MYB4_LEUCK
Length = 396
Score = 105 bits (263), Expect = 1e-21
Identities = 66/172 (38%), Positives = 97/172 (56%), Gaps = 14/172 (8%)
Frame = +2
Query: 2 VIIGENESDD---TLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGL 172
V+I SD LS K + AWE AE V K+VNA +GG++ V G+
Sbjct: 76 VVISNVTSDKEGVAYLLSKKRLDARKAWENLDF--AEGDTVDAKVVNAVRGGLIVMVNGV 133
Query: 173 KGFVPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ--------- 319
+GFVP S ++ + + + K+I + +E+D +RLILS RKAVA +
Sbjct: 134 RGFVPASMVAERFVSDLNQFKNKDIKAQVIEIDAANARLILS-RKAVAAQERAAQLAEVF 192
Query: 320 GQLGIGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+L +G VV G+V L +GAF+D+GG+ GL+HVS+ISHDR+ + + VL G
Sbjct: 193 SKLSVGEVVEGTVARLTDFGAFVDLGGVDGLVHVSEISHDRVKNPADVLTKG 244
Score = 68.6 bits (166), Expect = 2e-10
Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 15/172 (8%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQ------AEDAVVKGKIVNANKGGVVAEVE 166
+I + ++ L LS K++ A ER QL + VV+G + G ++
Sbjct: 162 VIEIDAANARLILSRKAVA---AQERAAQLAEVFSKLSVGEVVEGTVARLTDFGAFVDLG 218
Query: 167 GLKGFVPFSQIS---TKSTGEELLEKE-IPLKFVEVDEEQSRLILS----HRKAVADSQG 322
G+ G V S+IS K+ + L + + + +K + +D E+ R+ LS R ++
Sbjct: 219 GVDGLVHVSEISHDRVKNPADVLTKGDKVNVKILALDTEKGRISLSIKATQRGPWDEAAD 278
Query: 323 QLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDRITDISTVLQPG 475
++ GSV+ G+V+ +K +GAF++I GI GL+HVSQIS+ RI + S VL+ G
Sbjct: 279 KIAAGSVLEGTVKRVKDFGAFVEILPGIEGLVHVSQISNKRIENPSEVLKSG 330
[150][TOP]
>UniRef100_A4W0P0 SSU ribosomal protein S1P n=1 Tax=Streptococcus suis 98HAH33
RepID=A4W0P0_STRS2
Length = 349
Score = 105 bits (263), Expect = 1e-21
Identities = 58/156 (37%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E+ VV K+ A KGG+ E EGL+GF+
Sbjct: 76 VVGKDTDTVTYLVSKKRLEARKAWDKL--VGREEEVVTVKVTRAVKGGLAVEFEGLRGFI 133
Query: 185 PFSQISTKSTG--EELLEKEIPLKFVEVDEEQSRLILSHRKAV--------ADSQGQLGI 334
P S I ++ T E + +E K EVD ++R ILS R V A+ G+L +
Sbjct: 134 PASMIDSRFTRNTERFVGQEFDAKIKEVDPAENRFILSRRDVVEAAAAAARAEVFGKLAV 193
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDR 442
G VVTG V + +GAFID+GG+ GL+H++++SH+R
Sbjct: 194 GEVVTGKVARITSFGAFIDLGGVDGLVHLTELSHER 229
Score = 60.8 bits (146), Expect = 4e-08
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Frame = +2
Query: 110 VVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKST----GEELLEKEIPLKFVEVDEEQS 277
VV GK+ G ++ G+ G V +++S + + +E+ +K + +DE +
Sbjct: 196 VVTGKVARITSFGAFIDLGGVDGLVHLTELSHERNVSPKSAVTVGEEVEVKVLAIDEVEG 255
Query: 278 RLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDR 442
R+ LS + + +L G V+ G V+ L +GAF+++ GI GL+H+SQISH R
Sbjct: 256 RVSLSLKATQPGPWDGVEQKLVAGDVIEGKVKRLTDFGAFVEVLPGIDGLVHISQISHKR 315
Query: 443 ITDISTVLQPG 475
+ + L G
Sbjct: 316 VENPKDALSVG 326
[151][TOP]
>UniRef100_B9YN31 RNA binding S1 domain protein n=1 Tax='Nostoc azollae' 0708
RepID=B9YN31_ANAAZ
Length = 301
Score = 105 bits (263), Expect = 1e-21
Identities = 52/159 (32%), Positives = 88/159 (55%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+II + +++ + LS K ++ W+ Q+Q ++ ++ NKGG+ EV L+GF
Sbjct: 87 LIIRDQDAEGQVTLSRKQLEIQHLWDTLTQMQENSQTIQARVTGVNKGGITVEVLSLRGF 146
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P S +S + E L + + F+EV+ +LILS R A S L +G +V G++
Sbjct: 147 IPRSHLSERDNLEALKGQTLTAGFLEVNRNTKKLILSERLATRSSNFSLLEVGQLVEGTI 206
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+KP+G F+D+ G+S LLH+ Q+S I + V Q G
Sbjct: 207 TGIKPFGVFVDLEGVSALLHIKQVSQKFIESLEKVFQIG 245
[152][TOP]
>UniRef100_Q6B8Z9 30S ribosomal protein S1 n=1 Tax=Gracilaria tenuistipitata var.
liui RepID=Q6B8Z9_GRATL
Length = 265
Score = 105 bits (263), Expect = 1e-21
Identities = 54/158 (34%), Positives = 92/158 (58%), Gaps = 1/158 (0%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
I N+ L LS+K + + AW+R +QL+ E+ ++ ++N NKGG++ +EGL F+
Sbjct: 83 IFAYNKERQQLLLSIKRLDYIKAWKRIKQLETEEIILHVPLINFNKGGILTALEGLHSFI 142
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQ-LGIGSVVTGSVQ 361
P S + + E ++ +P K + VDE+ +++ILSH+ A+ L +G +V G +
Sbjct: 143 PRSHLILFNAYESMVRSYLPCKILLVDEKTNKIILSHKLALLYLYSDLLRVGRLVYGQII 202
Query: 362 SLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
K YG F++I GI LLH+S+I ++ I +I V G
Sbjct: 203 QFKQYGIFLNIYGIPALLHISEIGYEYIDNIDCVFAIG 240
[153][TOP]
>UniRef100_B9DSB1 Putative 30S ribosomal protein S1 n=1 Tax=Streptococcus uberis
0140J RepID=B9DSB1_STRU0
Length = 405
Score = 105 bits (262), Expect = 2e-21
Identities = 60/167 (35%), Positives = 95/167 (56%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EGL+GF+
Sbjct: 76 VVGKDTDTVTFLVSKKRLEARKAWDKLIGREGEVVTVKG--TRAVKGGLSVEFEGLRGFI 133
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLGI 334
P S I T+ E+ + +E K EVD ++R ILS R+ + ++ +L
Sbjct: 134 PASMIDTRFVRNTEKFVGQEFDAKIKEVDAAENRFILSRREVIEETTAAARQEVFSKLSE 193
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
GSVVTG+V L +GAFID+GG+ GL+HV+++SH+R +V+ G
Sbjct: 194 GSVVTGTVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVG 240
Score = 63.9 bits (154), Expect = 5e-09
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 9/135 (6%)
Frame = +2
Query: 98 AEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGEEL----LEKEIPLKFVEVD 265
+E +VV G + G ++ G+ G V +++S + + E+ +K + +D
Sbjct: 192 SEGSVVTGTVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVGDEVEVKVLSID 251
Query: 266 EEQSRLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQI 430
EE R+ LS + + +L G VV G V+ L +GAF+++ GI GL+H+SQI
Sbjct: 252 EEAGRVSLSLKATTPGPWDGVEQKLAQGDVVEGKVKRLTDFGAFVEVLPGIDGLVHISQI 311
Query: 431 SHDRITDISTVLQPG 475
SH R+ + VL G
Sbjct: 312 SHKRVENPKDVLSVG 326
[154][TOP]
>UniRef100_A2BVJ2 30S ribosomal protein S1 protein B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. MIT 9515
RepID=A2BVJ2_PROM5
Length = 408
Score = 105 bits (262), Expect = 2e-21
Identities = 51/159 (32%), Positives = 94/159 (59%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++I E +D + +S +++ +WE+ +++ I N+GG+ +V+GL+GF
Sbjct: 187 LVIKEQNADGMVTISSRALILRQSWEKVENSAKNGELIQVSINGFNRGGLTCDVDGLRGF 246
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P SQ+ + L+ K + + F+EV+ E +L+LS +KA+ S+ L +G ++ G V
Sbjct: 247 IPRSQLEDGQDYQSLVNKTLKVAFLEVNPESRKLVLSEKKALLVSKFSGLKLGQLIEGEV 306
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+KPYG F+D+GG SGLLH S I++ I ++ + + G
Sbjct: 307 LGIKPYGFFVDLGGASGLLHQSSITNGSIRNLREIFEEG 345
[155][TOP]
>UniRef100_UPI0001BB552C 30S ribosomal protein S1 n=1 Tax=Streptococcus sp. 2_1_36FAA
RepID=UPI0001BB552C
Length = 401
Score = 105 bits (261), Expect = 2e-21
Identities = 59/167 (35%), Positives = 95/167 (56%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EGL+GF+
Sbjct: 76 VVGKDTDTVTYLVSKKRLEARKAWDKLVGREEEVVTVKG--TRAVKGGLSVEFEGLRGFI 133
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAV--------ADSQGQLGI 334
P S + T+ E + +E K EVD +++R ILS R+ V A+ G+L +
Sbjct: 134 PASMLDTRFVRNTERFVGQEFDAKIKEVDPKENRFILSRREVVEAEAAAARAEVFGKLNV 193
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G VVTG V + +GAFID+GG+ GL+H++++SH+R +V+ G
Sbjct: 194 GDVVTGKVARITSFGAFIDLGGVDGLVHLTELSHERNVSPKSVVTVG 240
Score = 65.9 bits (159), Expect = 1e-09
Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 9/131 (6%)
Frame = +2
Query: 110 VVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGEE----LLEKEIPLKFVEVDEEQS 277
VV GK+ G ++ G+ G V +++S + + +EI +K ++++EE+
Sbjct: 196 VVTGKVARITSFGAFIDLGGVDGLVHLTELSHERNVSPKSVVTVGEEIEVKVLDLNEEEG 255
Query: 278 RLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDR 442
R+ LS + + +L G V+ G+V+ L +GAF+++ GI GL+H+SQISH R
Sbjct: 256 RVSLSLKATTPGPWDGVEQKLAAGDVIEGTVKRLTDFGAFVEVLPGIDGLVHISQISHKR 315
Query: 443 ITDISTVLQPG 475
+ + VL G
Sbjct: 316 VENPKDVLSVG 326
[156][TOP]
>UniRef100_Q7V2F0 30S ribosomal protein S1 homolog B, putative Nbp1 n=1
Tax=Prochlorococcus marinus subsp. pastoris str.
CCMP1986 RepID=Q7V2F0_PROMP
Length = 405
Score = 105 bits (261), Expect = 2e-21
Identities = 51/159 (32%), Positives = 94/159 (59%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++I E +D + +S +++ +WE+ +++ I N+GG+ +V+GL+GF
Sbjct: 187 LVIKEQNADGMVTVSARALILRQSWEKVASSAKNGELIQVTINGFNRGGLTCDVDGLRGF 246
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P SQ+ + L+ K + + F+EV+ E +L+LS +KA+ S+ L G ++ G V
Sbjct: 247 IPRSQLENGQDYQSLVSKNLKVAFLEVNPETRKLVLSEKKALLVSKFADLKFGQLIEGEV 306
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG F+D+GG SGLLH S I++ I ++ + + G
Sbjct: 307 LAIKPYGFFVDLGGASGLLHQSSITNGSIRNLREIFREG 345
[157][TOP]
>UniRef100_A8AXL0 30S ribosomal protein S1 n=1 Tax=Streptococcus gordonii str.
Challis RepID=A8AXL0_STRGC
Length = 401
Score = 105 bits (261), Expect = 2e-21
Identities = 59/167 (35%), Positives = 95/167 (56%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EGL+GF+
Sbjct: 76 VVGKDTDTVTYLVSKKRLEARKAWDKLVGREEEVVTVKG--TRAVKGGLSVEFEGLRGFI 133
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAV--------ADSQGQLGI 334
P S + T+ E + +E K EVD +++R ILS R+ V A+ G+L +
Sbjct: 134 PASMLDTRFVRNTERFVGQEFDAKIKEVDPKENRFILSRREVVEAEAATARAEVFGKLNV 193
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G VVTG V + +GAFID+GG+ GL+H++++SH+R +V+ G
Sbjct: 194 GDVVTGKVARITSFGAFIDLGGVDGLVHLTELSHERNVSPKSVVTVG 240
Score = 65.9 bits (159), Expect = 1e-09
Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 9/131 (6%)
Frame = +2
Query: 110 VVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGEE----LLEKEIPLKFVEVDEEQS 277
VV GK+ G ++ G+ G V +++S + + +EI +K ++++EE+
Sbjct: 196 VVTGKVARITSFGAFIDLGGVDGLVHLTELSHERNVSPKSVVTVGEEIEVKVLDLNEEEG 255
Query: 278 RLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDR 442
R+ LS + + +L G V+ G+V+ L +GAF+++ GI GL+H+SQISH R
Sbjct: 256 RVSLSLKATTPGPWDGVEQKLAAGDVIEGTVKRLTDFGAFVEVLPGIDGLVHISQISHKR 315
Query: 443 ITDISTVLQPG 475
+ + VL G
Sbjct: 316 VENPKDVLSVG 326
[158][TOP]
>UniRef100_A3CN72 30S ribosomal protein S1, putative n=1 Tax=Streptococcus sanguinis
SK36 RepID=A3CN72_STRSV
Length = 401
Score = 105 bits (261), Expect = 2e-21
Identities = 58/167 (34%), Positives = 95/167 (56%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EGL+GF+
Sbjct: 76 VVGKDTDTVTYLVSKKRLEARKAWDKLVGREEEVVTVKG--TRAVKGGLSVEFEGLRGFI 133
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAV--------ADSQGQLGI 334
P S + T+ E + +E K EVD +++R ILS R+ V A+ G+L +
Sbjct: 134 PASMLDTRFVRNTERFVGQEFDAKIKEVDPKENRFILSRREVVEAEAAAARAEVFGKLNV 193
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G +VTG V + +GAFID+GG+ GL+H++++SH+R +V+ G
Sbjct: 194 GDIVTGKVARITSFGAFIDLGGVDGLVHLTELSHERNVSPKSVVSVG 240
Score = 62.8 bits (151), Expect = 1e-08
Identities = 38/131 (29%), Positives = 69/131 (52%), Gaps = 9/131 (6%)
Frame = +2
Query: 110 VVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGEEL----LEKEIPLKFVEVDEEQS 277
+V GK+ G ++ G+ G V +++S + + EI +K ++++EE+
Sbjct: 196 IVTGKVARITSFGAFIDLGGVDGLVHLTELSHERNVSPKSVVSVGDEIEVKVLDLNEEEG 255
Query: 278 RLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDR 442
R+ LS + + +L G V+ G+V+ L +GAF+++ GI GL+H+SQISH R
Sbjct: 256 RVSLSLKATTPGPWDGVEQKLAAGDVIEGTVKRLTDFGAFVEVLPGIDGLVHISQISHKR 315
Query: 443 ITDISTVLQPG 475
+ L+ G
Sbjct: 316 VESPKDALKVG 326
[159][TOP]
>UniRef100_C6QPH8 RNA binding S1 domain protein n=1 Tax=Geobacillus sp. Y4.1MC1
RepID=C6QPH8_9BACI
Length = 387
Score = 105 bits (261), Expect = 2e-21
Identities = 60/165 (36%), Positives = 93/165 (56%), Gaps = 10/165 (6%)
Frame = +2
Query: 11 GENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPF 190
GENE D L LS K++ AWE + A + + + KGG+VA+V G++GF+P
Sbjct: 76 GENEEDGLLILSKKAVDAERAWEELERRFASGETFEVIVKDIVKGGLVADV-GVRGFIPA 134
Query: 191 SQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ--------GQLGIGS 340
S + + + K + +K VE+D E++R+ILSHR V + Q +L G
Sbjct: 135 SLVEPHYVEDFSDYKGKPLAVKVVELDREKNRVILSHRAVVEEEQERQRKEALSRLETGQ 194
Query: 341 VVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
V+ G V+ + +G F+D+GG GL+H+SQ+SH R+ S V+Q G
Sbjct: 195 VLEGIVRRITDFGVFVDVGGFDGLVHISQLSHTRVAHPSDVVQEG 239
Score = 66.2 bits (160), Expect = 1e-09
Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 9/131 (6%)
Frame = +2
Query: 110 VVKGKIVNANKGGVVAEVEGLKGFVPFSQIS---TKSTGEELLEKE-IPLKFVEVDEEQS 277
V++G + GV +V G G V SQ+S + + E E + +K + VDEE
Sbjct: 195 VLEGIVRRITDFGVFVDVGGFDGLVHISQLSHTRVAHPSDVVQEGETVKVKVLSVDEENG 254
Query: 278 RLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDR 442
R+ LS ++A+ ++ G +VTG V+ L P+GAF++I GI GL+H+SQIS R
Sbjct: 255 RVSLSIKEALPSPWEGIAEKIAPGDIVTGKVKRLVPFGAFVEIFPGIEGLVHISQISTKR 314
Query: 443 ITDISTVLQPG 475
I VL+ G
Sbjct: 315 IGTPHEVLKEG 325
[160][TOP]
>UniRef100_Q5M0R3 30S ribosomal protein S1 n=3 Tax=Streptococcus thermophilus
RepID=Q5M0R3_STRT1
Length = 417
Score = 104 bits (260), Expect = 3e-21
Identities = 61/167 (36%), Positives = 93/167 (55%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EGL+GF+
Sbjct: 93 VVGKDTDTVTYLVSKKRLEARKAWDKLVGREEEVVTVKG--TRAVKGGLSVEFEGLRGFI 150
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ--------GQLGI 334
P S I T+ E+ + +E K EVD ++R ILS R+ V +L +
Sbjct: 151 PASMIDTRFVRNTEQFVGQEFDAKIKEVDPAENRFILSRREVVEAEAIEARKEVFSKLEV 210
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
GSVVTG V L +GAFID+GG+ GL+HV+++SH+R +V+ G
Sbjct: 211 GSVVTGKVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVG 257
Score = 63.2 bits (152), Expect = 9e-09
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Frame = +2
Query: 107 AVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGEEL----LEKEIPLKFVEVDEEQ 274
+VV GK+ G ++ G+ G V +++S + + EI +K + +DEE
Sbjct: 212 SVVTGKVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVGDEIEVKVLAIDEEA 271
Query: 275 SRLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHD 439
R+ LS + + +L G V+ G V+ L +G F+++ GI GL+H+SQISH
Sbjct: 272 GRVSLSLKATTPGPWDGVEQKLAAGDVIEGKVKRLTDFGGFVEVLPGIDGLVHISQISHK 331
Query: 440 RITDISTVLQPG 475
R+ + VL G
Sbjct: 332 RVENPKDVLSVG 343
[161][TOP]
>UniRef100_Q03LL8 SSU ribosomal protein S1P n=1 Tax=Streptococcus thermophilus LMD-9
RepID=Q03LL8_STRTD
Length = 400
Score = 104 bits (260), Expect = 3e-21
Identities = 61/167 (36%), Positives = 93/167 (55%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EGL+GF+
Sbjct: 76 VVGKDTDTVTYLVSKKRLEARKAWDKLVGREEEVVTVKG--TRAVKGGLSVEFEGLRGFI 133
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ--------GQLGI 334
P S I T+ E+ + +E K EVD ++R ILS R+ V +L +
Sbjct: 134 PASMIDTRFVRNTEQFVGQEFDAKIKEVDPAENRFILSRREVVEAEAMEARKEVFSKLEV 193
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
GSVVTG V L +GAFID+GG+ GL+HV+++SH+R +V+ G
Sbjct: 194 GSVVTGKVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVG 240
Score = 63.2 bits (152), Expect = 9e-09
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Frame = +2
Query: 107 AVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGEEL----LEKEIPLKFVEVDEEQ 274
+VV GK+ G ++ G+ G V +++S + + EI +K + +DEE
Sbjct: 195 SVVTGKVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVGDEIEVKVLAIDEEA 254
Query: 275 SRLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHD 439
R+ LS + + +L G V+ G V+ L +G F+++ GI GL+H+SQISH
Sbjct: 255 GRVSLSLKATTPGPWDGVEQKLAAGDVIEGKVKRLTDFGGFVEVLPGIDGLVHISQISHK 314
Query: 440 RITDISTVLQPG 475
R+ + VL G
Sbjct: 315 RVENPKDVLSVG 326
[162][TOP]
>UniRef100_C2LUW9 30S ribosomal protein S1 homolog n=1 Tax=Streptococcus salivarius
SK126 RepID=C2LUW9_STRSL
Length = 400
Score = 104 bits (260), Expect = 3e-21
Identities = 60/167 (35%), Positives = 93/167 (55%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EGL+GF+
Sbjct: 76 VVGKDTDTVTYLVSKKRLEARKAWDKLVGREEEVVTVKG--TRAVKGGLSVEFEGLRGFI 133
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQ--------LGI 334
P S I T+ E+ + +E K EVD ++R ILS R+ V + L +
Sbjct: 134 PASMIDTRFVRNTEQFVGQEFDAKIKEVDPAENRFILSRREVVEAEAAEARKEVFSKLEV 193
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
GS+VTG V L +GAFID+GG+ GL+HV+++SH+R +V+ G
Sbjct: 194 GSIVTGKVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVG 240
Score = 63.9 bits (154), Expect = 5e-09
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Frame = +2
Query: 107 AVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGEEL----LEKEIPLKFVEVDEEQ 274
++V GK+ G ++ G+ G V +++S + + E+ +K + +DEE
Sbjct: 195 SIVTGKVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVGDEVEVKVLAIDEEA 254
Query: 275 SRLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHD 439
R+ LS + + +L G V+ G V+ L +GAF+++ GI GL+H+SQISH
Sbjct: 255 GRVSLSLKATTPGPWDGVEQKLAAGDVIEGKVKRLTDFGAFVEVLPGIDGLVHISQISHK 314
Query: 440 RITDISTVLQPG 475
R+ + VL G
Sbjct: 315 RVENPKDVLSVG 326
[163][TOP]
>UniRef100_C5WGZ8 30S ribosomal protein S1 n=1 Tax=Streptococcus dysgalactiae subsp.
equisimilis GGS_124 RepID=C5WGZ8_STRDG
Length = 401
Score = 104 bits (259), Expect = 4e-21
Identities = 59/167 (35%), Positives = 95/167 (56%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EGL+GF+
Sbjct: 76 VVGKDTDTVTFLVSKKRLEARKAWDKLVGREGEVVTVKG--TRAVKGGLSVEFEGLRGFI 133
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ--------GQLGI 334
P S I T+ E+ + +E K EVD ++R ILS R+ + ++ +L
Sbjct: 134 PASMIDTRFVRNTEKFVGQEFDAKIKEVDAAENRFILSRREVIEEAAKEARTEVFSKLSE 193
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G+VVTG+V L +GAFID+GG+ GL+HV+++SH+R +V+ G
Sbjct: 194 GAVVTGTVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVG 240
Score = 66.2 bits (160), Expect = 1e-09
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 14/140 (10%)
Frame = +2
Query: 98 AEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTK---------STGEELLEKEIPLK 250
+E AVV G + G ++ G+ G V +++S + S GEE + +K
Sbjct: 192 SEGAVVTGTVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVGEE-----VEVK 246
Query: 251 FVEVDEEQSRLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLL 415
+ +DEE R+ LS + + +L G VV G V+ L +GAF+++ GI GL+
Sbjct: 247 VLSIDEEAGRVSLSLKATTPGPWDGVEQKLAQGDVVEGKVKRLTDFGAFVEVLPGIDGLV 306
Query: 416 HVSQISHDRITDISTVLQPG 475
H+SQISH R+ + VL G
Sbjct: 307 HISQISHKRVENPKDVLSVG 326
[164][TOP]
>UniRef100_A7VX59 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753
RepID=A7VX59_9CLOT
Length = 686
Score = 103 bits (258), Expect = 5e-21
Identities = 59/169 (34%), Positives = 96/169 (56%), Gaps = 11/169 (6%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+I+ N+ + T+ LS K + WE + + VV G + KGGV+A G++ F
Sbjct: 366 LIMRTNDQEGTIMLSKKRLDAIKGWEEIVEANENETVVTGIVTEVIKGGVIAVTNGVRVF 425
Query: 182 VPFSQISTKSTG---EELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLG------- 331
+P SQ +T S G E+LL++E+ + +EV+ + R + S R + D + +L
Sbjct: 426 IPASQ-ATASRGDSLEDLLKQEVKFRIIEVNRGRRRAVGSIRSVLKDERKKLAEKFWETA 484
Query: 332 -IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
IG V TG+V+SL YGAF+D+GGI G++H+S++S RI S ++ G
Sbjct: 485 EIGKVYTGTVKSLTSYGAFVDLGGIDGMVHISELSWSRIKHPSEIVNVG 533
[165][TOP]
>UniRef100_Q8K7U4 Putative ribosomal protein S1-like DNA-binding protein n=1
Tax=Streptococcus pyogenes serotype M3
RepID=Q8K7U4_STRP3
Length = 401
Score = 103 bits (257), Expect = 6e-21
Identities = 58/167 (34%), Positives = 95/167 (56%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EGL+GF+
Sbjct: 76 VVGKDTDTVTFLVSKKRLEARKAWDKLVGREGEVVTVKG--TRAVKGGLSVEFEGLRGFI 133
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ--------GQLGI 334
P S I T+ E+ + +E K EVD ++R ILS R+ + ++ ++
Sbjct: 134 PASMIDTRFVRNTEKFVGQEFDAKIKEVDAAENRFILSRREVIEEAAKEARAEVFSKISE 193
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G+VVTG+V L +GAFID+GG+ GL+HV+++SH+R +V+ G
Sbjct: 194 GAVVTGTVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVG 240
Score = 63.9 bits (154), Expect = 5e-09
Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 14/140 (10%)
Frame = +2
Query: 98 AEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTK---------STGEELLEKEIPLK 250
+E AVV G + G ++ G+ G V +++S + S GEE + +K
Sbjct: 192 SEGAVVTGTVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVGEE-----VEVK 246
Query: 251 FVEVDEEQSRLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLL 415
+ +DEE R+ LS + + +L G VV V+ L +GAF+++ GI GL+
Sbjct: 247 VLSIDEEAGRVSLSLKATTPGPWDGVEQKLAQGDVVESKVKRLTDFGAFVEVLPGIDGLV 306
Query: 416 HVSQISHDRITDISTVLQPG 475
H+SQISH R+ + VL G
Sbjct: 307 HISQISHKRVENPKDVLSVG 326
[166][TOP]
>UniRef100_Q1J715 SSU ribosomal protein S1P n=8 Tax=Streptococcus pyogenes
RepID=Q1J715_STRPF
Length = 401
Score = 103 bits (257), Expect = 6e-21
Identities = 58/167 (34%), Positives = 95/167 (56%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EGL+GF+
Sbjct: 76 VVGKDTDTVTFLVSKKRLEARKAWDKLVGREGEVVTVKG--TRAVKGGLSVEFEGLRGFI 133
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ--------GQLGI 334
P S I T+ E+ + +E K EVD ++R ILS R+ + ++ ++
Sbjct: 134 PASMIDTRFVRNTEKFVGQEFDAKIKEVDAAENRFILSRREVIEEAAKEARAEVFSKISE 193
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G+VVTG+V L +GAFID+GG+ GL+HV+++SH+R +V+ G
Sbjct: 194 GAVVTGTVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVG 240
Score = 66.2 bits (160), Expect = 1e-09
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 14/140 (10%)
Frame = +2
Query: 98 AEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTK---------STGEELLEKEIPLK 250
+E AVV G + G ++ G+ G V +++S + S GEE + +K
Sbjct: 192 SEGAVVTGTVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVGEE-----VEVK 246
Query: 251 FVEVDEEQSRLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLL 415
+ +DEE R+ LS + + +L G VV G V+ L +GAF+++ GI GL+
Sbjct: 247 VLSIDEEAGRVSLSLKATTPGPWDGVEQKLAQGDVVEGKVKRLTDFGAFVEVLPGIDGLV 306
Query: 416 HVSQISHDRITDISTVLQPG 475
H+SQISH R+ + VL G
Sbjct: 307 HISQISHKRVENPKDVLSVG 326
[167][TOP]
>UniRef100_C9LAT8 Ribosomal protein S1 n=1 Tax=Blautia hansenii DSM 20583
RepID=C9LAT8_RUMHA
Length = 250
Score = 103 bits (257), Expect = 6e-21
Identities = 59/147 (40%), Positives = 93/147 (63%), Gaps = 11/147 (7%)
Frame = +2
Query: 68 LAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTK--STGEELLEKEI 241
L W++ Q++ + + + KGGV+A VEG++ F+P S+++ E+ L+K I
Sbjct: 48 LIWDKLEQMKEDKTEFEVSVEGIVKGGVIAYVEGIRAFIPVSKLALNYVENPEDFLKKTI 107
Query: 242 PLKFVEVDEEQSRLILSHR-----KAVADSQGQLG---IGSVVTGSVQSLKPYGAFIDIG 397
++ EVDE+++RL+LS + KA A+ + ++ +GS+V G+V+SL+ YGAFID+G
Sbjct: 108 TVRVFEVDEQENRLVLSAKEILKEKADAEKRSKIDDIKVGSIVEGTVESLQTYGAFIDLG 167
Query: 398 -GISGLLHVSQISHDRITDISTVLQPG 475
GISGL+HVSQIS RI VL G
Sbjct: 168 DGISGLVHVSQISEKRIKSPKAVLSIG 194
[168][TOP]
>UniRef100_B5XL27 SSU ribosomal protein S1p n=1 Tax=Streptococcus pyogenes NZ131
RepID=B5XL27_STRPZ
Length = 401
Score = 103 bits (256), Expect = 8e-21
Identities = 58/167 (34%), Positives = 95/167 (56%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EGL+GF+
Sbjct: 76 VVGKDTDTVTFLVSKKRLEARKAWDKLVGREGEVVTVKG--TRAVKGGLSIEFEGLRGFI 133
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ--------GQLGI 334
P S I T+ E+ + +E K EVD ++R ILS R+ + ++ ++
Sbjct: 134 PASMIDTRFVRNTEKFVGQEFDAKIKEVDAAENRFILSRREVIEEAAKEARAEVFSKISE 193
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G+VVTG+V L +GAFID+GG+ GL+HV+++SH+R +V+ G
Sbjct: 194 GAVVTGTVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVG 240
Score = 66.2 bits (160), Expect = 1e-09
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 14/140 (10%)
Frame = +2
Query: 98 AEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTK---------STGEELLEKEIPLK 250
+E AVV G + G ++ G+ G V +++S + S GEE + +K
Sbjct: 192 SEGAVVTGTVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVGEE-----VEVK 246
Query: 251 FVEVDEEQSRLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLL 415
+ +DEE R+ LS + + +L G VV G V+ L +GAF+++ GI GL+
Sbjct: 247 VLSIDEEAGRVSLSLKATTPGPWDGVEQKLAQGDVVEGKVKRLTDFGAFVEVLPGIDGLV 306
Query: 416 HVSQISHDRITDISTVLQPG 475
H+SQISH R+ + VL G
Sbjct: 307 HISQISHKRVENPKDVLSVG 326
[169][TOP]
>UniRef100_C3J922 30S ribosomal protein S1 n=2 Tax=Bacteria RepID=C3J922_9PORP
Length = 583
Score = 103 bits (256), Expect = 8e-21
Identities = 51/165 (30%), Positives = 98/165 (59%), Gaps = 10/165 (6%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
+I + + L LS + + AWER + Q +D V+ G I + KGG++ +V G++ F+
Sbjct: 83 VISQEDRSGALVLSHRQARLERAWERINEAQEKDEVILGFIKSRTKGGMIVDVFGVEAFL 142
Query: 185 PFSQISTKSTG--EELLEKEIPLKFVEVDEEQSRLILSHRKAV--------ADSQGQLGI 334
P SQI + + L++K + K V++++EQ +++SH+ V D +L
Sbjct: 143 PGSQIDVRPIRDYDALIDKTMEFKIVKINQEQKNVVVSHKILVEAELEQQKRDIISKLEK 202
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQ 469
G V+ G+V+++ P+G F+D+GG+ GL+H++ +S +R++ S V++
Sbjct: 203 GQVLEGTVKNILPFGVFVDLGGVDGLIHITDLSWERVSHPSEVVE 247
[170][TOP]
>UniRef100_Q2JV37 Putative ribosomal protein S1 n=1 Tax=Synechococcus sp. JA-3-3Ab
RepID=Q2JV37_SYNJA
Length = 304
Score = 102 bits (255), Expect = 1e-20
Identities = 54/159 (33%), Positives = 91/159 (57%), Gaps = 2/159 (1%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
+I +S+ + LS + ++ WE + Q V ++ NKGGV+ +V+GL+GF+
Sbjct: 86 LILREDSEGQIVLSARRLRLKRLWEELAEKQTNGQTVTALVIGTNKGGVLVDVQGLRGFI 145
Query: 185 PFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKA-VADSQGQLGIGSVVTGSVQ 361
P S ++ + EEL+ + + +EV+ ++L+LS R A A+S G G VV G V
Sbjct: 146 PRSHLNQRENLEELVGQSLTASLLEVNPAANKLVLSQRVARQAESLGIYTTGQVVRGKVS 205
Query: 362 SLKPYGAFIDI-GGISGLLHVSQISHDRITDISTVLQPG 475
+LKP+G F+++ G SGLL + Q+S + +S + QPG
Sbjct: 206 ALKPFGVFVELEEGGSGLLPIKQVSQSFVASLSDLFQPG 244
[171][TOP]
>UniRef100_C0FW69 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans
DSM 16841 RepID=C0FW69_9FIRM
Length = 300
Score = 102 bits (255), Expect = 1e-20
Identities = 60/168 (35%), Positives = 100/168 (59%), Gaps = 11/168 (6%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++ ++ + LS K LAWE+ +Q+ + VVK +I + GVV +EG++ F+
Sbjct: 75 VVKTDDGQGNILLSRKEANDVLAWEKLQQMMEDGTVVKVRIKESVPSGVVTFLEGIRAFI 134
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRK-----AVADSQGQLGI--- 334
P SQ++ EE + KE+ K + VD E+ +L+LS ++ A+ + ++ +
Sbjct: 135 PASQLALDYVENTEEWIGKEVEAKVITVDPEKEKLVLSAKQVAKEAAIEERNHKISMIVP 194
Query: 335 GSVVTGSVQSLKPYGAFIDIG-GISGLLHVSQISHDRITDISTVLQPG 475
G+V+ G+V+SL PYGAFI++G G+SGL+H+SQI RI S VL+ G
Sbjct: 195 GTVMEGTVESLMPYGAFINLGNGLSGLVHISQICERRIKKPSEVLKEG 242
[172][TOP]
>UniRef100_A5MJY0 Ribosomal protein S1 n=1 Tax=Streptococcus pneumoniae SP19-BS75
RepID=A5MJY0_STRPN
Length = 400
Score = 102 bits (255), Expect = 1e-20
Identities = 57/167 (34%), Positives = 95/167 (56%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EG++GF+
Sbjct: 76 VVGKDTDTVTYLVSKKRLEARKAWDKLVGREEEVVTVKG--TRAVKGGLSVEFEGVRGFI 133
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAV--------ADSQGQLGI 334
P S + T+ E + +E K EV+ +++R ILS R+ V A+ G+L +
Sbjct: 134 PASMLDTRFVRNAERFVGQEFDTKIKEVNAKENRFILSRREVVEAATAAARAEVFGKLAV 193
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G VVTG V + +GAFID+GG+ GL+H++++SH+R +V+ G
Sbjct: 194 GDVVTGKVARITSFGAFIDLGGVDGLVHLTELSHERNVSPKSVVTVG 240
Score = 67.0 bits (162), Expect = 6e-10
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 9/131 (6%)
Frame = +2
Query: 110 VVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGEE----LLEKEIPLKFVEVDEEQS 277
VV GK+ G ++ G+ G V +++S + + +EI +K ++++EE+
Sbjct: 196 VVTGKVARITSFGAFIDLGGVDGLVHLTELSHERNVSPKSVVTVGEEIEVKILDLNEEEG 255
Query: 278 RLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDR 442
R+ LS + V + +L G VV G+V+ L +GAF+++ GI GL+HVSQISH R
Sbjct: 256 RVSLSIKATVPGPWDGVEQKLAKGDVVEGTVKRLTDFGAFVEVLPGIDGLVHVSQISHKR 315
Query: 443 ITDISTVLQPG 475
I + L+ G
Sbjct: 316 IENPKEALKVG 326
[173][TOP]
>UniRef100_B2INY1 30S ribosomal protein S1 n=21 Tax=Streptococcus pneumoniae
RepID=B2INY1_STRPS
Length = 400
Score = 102 bits (255), Expect = 1e-20
Identities = 57/167 (34%), Positives = 95/167 (56%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EG++GF+
Sbjct: 76 VVGKDTDTVTYLVSKKRLEARKAWDKLVGREEEVVTVKG--TRAVKGGLSVEFEGVRGFI 133
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAV--------ADSQGQLGI 334
P S + T+ E + +E K EV+ +++R ILS R+ V A+ G+L +
Sbjct: 134 PASMLDTRFVRNAERFVGQEFDTKIKEVNAKENRFILSRREVVEAATAAARAEVFGKLAV 193
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G VVTG V + +GAFID+GG+ GL+H++++SH+R +V+ G
Sbjct: 194 GDVVTGKVARITSFGAFIDLGGVDGLVHLTELSHERNVSPKSVVTVG 240
Score = 67.0 bits (162), Expect = 6e-10
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 9/131 (6%)
Frame = +2
Query: 110 VVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGEE----LLEKEIPLKFVEVDEEQS 277
VV GK+ G ++ G+ G V +++S + + +EI +K ++++EE+
Sbjct: 196 VVTGKVARITSFGAFIDLGGVDGLVHLTELSHERNVSPKSVVTVGEEIEVKILDLNEEEG 255
Query: 278 RLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDR 442
R+ LS + V + +L G VV G+V+ L +GAF+++ GI GL+HVSQISH R
Sbjct: 256 RVSLSLKATVPGPWDGVEQKLAKGDVVEGTVKRLTDFGAFVEVLPGIDGLVHVSQISHKR 315
Query: 443 ITDISTVLQPG 475
I + L+ G
Sbjct: 316 IENPKEALKVG 326
[174][TOP]
>UniRef100_B1HT94 30S ribosomal protein S1-like protein n=1 Tax=Lysinibacillus
sphaericus C3-41 RepID=B1HT94_LYSSC
Length = 378
Score = 102 bits (254), Expect = 1e-20
Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 10/160 (6%)
Frame = +2
Query: 26 DDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQIST 205
++ LS + + AW+ Q + + ++ + KGG+V ++ G++GFVP S +
Sbjct: 75 EENFVLSKRKVDALKAWDTLEQQFTAGEIFEAEVKDIVKGGLVVDL-GVRGFVPASLVED 133
Query: 206 KSTG--EELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLGIGSVVTGS 355
E K + K VE+D+E++RLILSHR V + Q+ G V+ G
Sbjct: 134 YFVDDFEGYKGKSLSFKIVELDKEKNRLILSHRAVVESEKASQKKDVINQIKAGDVLDGK 193
Query: 356 VQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
VQ L +GAFID+GGI GL+H+SQ+SH+ ++D+S VL G
Sbjct: 194 VQRLASFGAFIDLGGIDGLVHISQVSHEHVSDVSEVLSEG 233
Score = 62.0 bits (149), Expect = 2e-08
Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Frame = +2
Query: 89 QLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQIS---TKSTGEELLEKE-IPLKFV 256
Q++A D V+ GK+ G ++ G+ G V SQ+S E L E + + +K +
Sbjct: 183 QIKAGD-VLDGKVQRLASFGAFIDLGGIDGLVHISQVSHEHVSDVSEVLSEGQGVTVKVL 241
Query: 257 EVDEEQSRLILSHRKAV----ADSQGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHV 421
VD E R+ LS ++ + ++ + + G+++ G V+ L +GAF+++ G+ GL+H+
Sbjct: 242 SVDPENERISLSIKETIPGPWSNIEERAAKGTILEGKVKRLTSFGAFVEVFPGVEGLVHI 301
Query: 422 SQISHDRITDISTVLQPG 475
SQI+H I L+ G
Sbjct: 302 SQIAHKHINTPHEALKEG 319
[175][TOP]
>UniRef100_A8FEM4 Ribosomal protein S1 n=1 Tax=Bacillus pumilus SAFR-032
RepID=A8FEM4_BACP2
Length = 383
Score = 102 bits (254), Expect = 1e-20
Identities = 58/160 (36%), Positives = 91/160 (56%), Gaps = 10/160 (6%)
Frame = +2
Query: 26 DDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQIST 205
DD L LS +++ AWE + V + ++ + KGG+V ++ G++GF+P S +
Sbjct: 76 DDALILSKRAVDADRAWEDLERKFETKEVFEAEVKDVVKGGLVVDI-GVRGFIPASLVEA 134
Query: 206 KSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ--------GQLGIGSVVTGS 355
+ + K + L VE+D E++R+ILSHR V Q +L +GSV+ G
Sbjct: 135 HYVEDFSDYKGKTLSLVVVELDREKNRVILSHRAVVEQEQLDKKQDFLQKLEVGSVIDGK 194
Query: 356 VQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
VQ L +GAF+DIGGI GL+H+SQ+SH + S V++ G
Sbjct: 195 VQRLTDFGAFVDIGGIDGLVHISQLSHAHVEKPSDVVEEG 234
Score = 68.2 bits (165), Expect = 3e-10
Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Frame = +2
Query: 107 AVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE--ELLEK--EIPLKFVEVDEEQ 274
+V+ GK+ G ++ G+ G V SQ+S + +++E+ E+ +K + VD +
Sbjct: 189 SVIDGKVQRLTDFGAFVDIGGIDGLVHISQLSHAHVEKPSDVVEEGQEVQVKVLAVDRDN 248
Query: 275 SRLILSHRKAVADSQGQLGI----GSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHD 439
R+ LS ++ + Q+G G V+ G+VQ L +GAF++I G+ GL+H+SQISH
Sbjct: 249 ERISLSIKETLPGPWSQIGEKVKQGDVLEGTVQRLVSFGAFVEILPGVEGLVHISQISHK 308
Query: 440 RITDISTVLQPG 475
I VL+ G
Sbjct: 309 HIGTPHEVLEEG 320
[176][TOP]
>UniRef100_A7NKT3 RNA binding S1 domain protein n=1 Tax=Roseiflexus castenholzii DSM
13941 RepID=A7NKT3_ROSCS
Length = 411
Score = 102 bits (254), Expect = 1e-20
Identities = 56/174 (32%), Positives = 98/174 (56%), Gaps = 17/174 (9%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++ + + LS+ + +W R +Q +++ K++N NKGG++ ++G++GFV
Sbjct: 108 VVQSEDKEGRATLSIDRARQEKSWRRLQQCYETGEIIEAKVINYNKGGLLVNLDGVRGFV 167
Query: 185 PFSQISTKSTGEE---------LLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLG- 331
P SQ+S G E ++ + + LK +E++ ++RLILS R+A D +G+ G
Sbjct: 168 PSSQVSGIGRGSEAQKQSEMARMVGQTLALKVIEINRNRNRLILSERQAAMDVREGRKGE 227
Query: 332 ------IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G V G V S+ +GAF+DIGG GL+H+S++S R+ S +L+PG
Sbjct: 228 LLSALKEGDVREGVVTSVCDFGAFVDIGGADGLVHLSELSWSRVKHPSEILKPG 281
Score = 56.6 bits (135), Expect = 8e-07
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQA---EDAVVKGKIVNANKGGVVAEVEGLK 175
+I N + + L LS + + R +L + E V +G + + G ++ G
Sbjct: 199 VIEINRNRNRLILSERQAAMDVREGRKGELLSALKEGDVREGVVTSVCDFGAFVDIGGAD 258
Query: 176 GFVPFSQISTKSTGE--ELLEK--EIPLKFVEVDEEQSRLILSHRKAVADSQGQLG---- 331
G V S++S E+L+ ++ + + +D E+ R+ LS ++ + +G
Sbjct: 259 GLVHLSELSWSRVKHPSEILKPGDKVQVYVLSIDNERKRIALSLKRTQHEPWATVGERYH 318
Query: 332 IGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDRITDISTVLQPG 475
IG +V G V L P+GAF+ I G+ GL+HVS++ R+ VLQ G
Sbjct: 319 IGQMVEGVVTQLAPFGAFVRIEDGVEGLIHVSEMGDGRVQHPRDVLQEG 367
[177][TOP]
>UniRef100_B4AKH1 Putative 30S ribosomal protein S1 homolog n=1 Tax=Bacillus pumilus
ATCC 7061 RepID=B4AKH1_BACPU
Length = 383
Score = 102 bits (254), Expect = 1e-20
Identities = 58/160 (36%), Positives = 91/160 (56%), Gaps = 10/160 (6%)
Frame = +2
Query: 26 DDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQIST 205
DD L LS +++ AWE + V + ++ + KGG+V ++ G++GF+P S +
Sbjct: 76 DDALILSKRAVDADRAWEDLEKKFETKEVFEAEVKDVVKGGLVVDI-GVRGFIPASLVEA 134
Query: 206 KSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ--------GQLGIGSVVTGS 355
+ + K + L VE+D E++R+ILSHR V Q +L +GSV+ G
Sbjct: 135 HYVEDFSDYKGKTLSLVVVELDREKNRVILSHRAVVEQEQLDKKQDFLQKLEVGSVIDGK 194
Query: 356 VQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
VQ L +GAF+DIGGI GL+H+SQ+SH + S V++ G
Sbjct: 195 VQRLTDFGAFVDIGGIDGLVHISQLSHAHVEKPSDVVEEG 234
Score = 68.2 bits (165), Expect = 3e-10
Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Frame = +2
Query: 107 AVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE--ELLEK--EIPLKFVEVDEEQ 274
+V+ GK+ G ++ G+ G V SQ+S + +++E+ E+ +K + VD +
Sbjct: 189 SVIDGKVQRLTDFGAFVDIGGIDGLVHISQLSHAHVEKPSDVVEEGQEVQVKVLAVDRDN 248
Query: 275 SRLILSHRKAVADSQGQLGI----GSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHD 439
R+ LS ++ + Q+G G V+ G+VQ L +GAF++I G+ GL+H+SQISH
Sbjct: 249 ERISLSIKETLPGPWSQIGEKVKQGDVLEGTVQRLVSFGAFVEILPGVEGLVHISQISHK 308
Query: 440 RITDISTVLQPG 475
I VL+ G
Sbjct: 309 HIGTPHEVLEEG 320
[178][TOP]
>UniRef100_B0MBX8 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM
14662 RepID=B0MBX8_9FIRM
Length = 309
Score = 102 bits (254), Expect = 1e-20
Identities = 59/169 (34%), Positives = 100/169 (59%), Gaps = 12/169 (7%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
+I ++ + + LS + LAW+R ++L E+ V+ + GGV+ VEG++GF+
Sbjct: 86 VISVDDGEGNIVLSKREANQVLAWDRLQKLMEEETVLSLTVGGVVNGGVIVYVEGIRGFI 145
Query: 185 PFSQISTKSTGEEL---LEKEIPLKFVEVDEEQSRLILSHR---KAVADSQ-----GQLG 331
P SQ+S E+L L+KE+ K + VDE +++L+LS + KA A + +
Sbjct: 146 PASQLSLNYV-EDLNTWLKKEVEAKIITVDESRNKLVLSAKEVEKAKAQEELNHKMAMMR 204
Query: 332 IGSVVTGSVQSLKPYGAFIDIG-GISGLLHVSQISHDRITDISTVLQPG 475
G V+ G+V+++ PYGAF+D+G G+SGL+H+SQ S RI +++ G
Sbjct: 205 PGMVLEGTVENIMPYGAFVDLGDGLSGLIHISQFSEKRIKSPKEMVEEG 253
[179][TOP]
>UniRef100_A5MBD0 30S ribosomal protein S1 n=4 Tax=Streptococcus pneumoniae
RepID=A5MBD0_STRPN
Length = 400
Score = 102 bits (254), Expect = 1e-20
Identities = 56/167 (33%), Positives = 95/167 (56%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EG++GF+
Sbjct: 76 VVGKDTDTVTYLVSKKRLEARKAWDKLVGREEEVVTVKG--TRAVKGGLSVEFEGVRGFI 133
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAV--------ADSQGQLGI 334
P S + T+ E + +E K EV+ +++R ILS R+ V A+ G+L +
Sbjct: 134 PASMLDTRFVRNAERFVGQEFDTKIKEVNAKENRFILSRREVVEAATAAARAEVFGKLAV 193
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G VVTG V + +GAF+D+GG+ GL+H++++SH+R +V+ G
Sbjct: 194 GDVVTGKVARITSFGAFVDLGGVDGLVHLTELSHERNVSPKSVVTVG 240
Score = 67.4 bits (163), Expect = 5e-10
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 9/131 (6%)
Frame = +2
Query: 110 VVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGEE----LLEKEIPLKFVEVDEEQS 277
VV GK+ G ++ G+ G V +++S + + +EI +K ++++EE+
Sbjct: 196 VVTGKVARITSFGAFVDLGGVDGLVHLTELSHERNVSPKSVVTVGEEIEVKILDLNEEEG 255
Query: 278 RLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDR 442
R+ LS + V + +L G VV G+V+ L +GAF+++ GI GL+HVSQISH R
Sbjct: 256 RVSLSLKATVPGPWDGVEQKLAKGDVVEGTVKRLTDFGAFVEVLPGIDGLVHVSQISHKR 315
Query: 443 ITDISTVLQPG 475
I + L+ G
Sbjct: 316 IENPKEALKVG 326
[180][TOP]
>UniRef100_C5D3G4 RNA binding S1 domain protein n=1 Tax=Geobacillus sp. WCH70
RepID=C5D3G4_GEOSW
Length = 387
Score = 102 bits (253), Expect = 2e-20
Identities = 58/165 (35%), Positives = 93/165 (56%), Gaps = 10/165 (6%)
Frame = +2
Query: 11 GENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPF 190
GENE D L LS K++ AWE + A + + KGG+VA+V G++GF+P
Sbjct: 76 GENEEDGLLILSKKAVDADRAWEELERKFASGETFDVVVKDIVKGGLVADV-GVRGFIPA 134
Query: 191 SQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ--------GQLGIGS 340
S + + + K + +K VE++ E++R+ILSHR V + Q +L G
Sbjct: 135 SLVEPHYVEDFSDYKGKTLAVKVVELNREKNRIILSHRAVVEEEQERKHKEALSRLEPGQ 194
Query: 341 VVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
V+ G+V+ + +G F+D+GG GL+H+SQ+SH R+ S V++ G
Sbjct: 195 VLEGTVRRVTDFGVFVDVGGFDGLVHISQLSHTRVAHPSEVVKEG 239
Score = 68.6 bits (166), Expect = 2e-10
Identities = 47/131 (35%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Frame = +2
Query: 110 VVKGKIVNANKGGVVAEVEGLKGFVPFSQIS-TKSTGEELLEKE---IPLKFVEVDEEQS 277
V++G + GV +V G G V SQ+S T+ + KE + +K + VDEE
Sbjct: 195 VLEGTVRRVTDFGVFVDVGGFDGLVHISQLSHTRVAHPSEVVKEGETVKVKVLAVDEENG 254
Query: 278 RLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDR 442
R+ LS ++A+ ++ G +VTG V+ L P+GAF++I G+ GL+H+SQIS+ R
Sbjct: 255 RVSLSIKEAMPGPWEGIAEKVAPGDIVTGKVKRLVPFGAFVEIFPGVEGLVHISQISNKR 314
Query: 443 ITDISTVLQPG 475
I VL+ G
Sbjct: 315 IGTPHEVLKEG 325
[181][TOP]
>UniRef100_B2IT95 RNA binding S1 domain protein n=1 Tax=Nostoc punctiforme PCC 73102
RepID=B2IT95_NOSP7
Length = 300
Score = 102 bits (253), Expect = 2e-20
Identities = 49/159 (30%), Positives = 91/159 (57%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+II + +++ + LS K ++ WER ++Q V+ +++ NKGGV ++ L+GF
Sbjct: 87 LIIRDQDAEGQVTLSRKQLEIQHIWERLAEMQENAQTVQVRVMGVNKGGVTVDILSLRGF 146
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P S ++ + + L + + + F+E+++ ++LILS R A S L +G +V G V
Sbjct: 147 IPRSHLAERDNLDALKGQNLTVGFLEINKNTNKLILSQRLATRSSNFSLLELGQLVEGKV 206
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+KP+G F+D+ G+ LLH+ Q+S I + V + G
Sbjct: 207 TGIKPFGVFVDLNGMGALLHIKQVSQKFIDSLEKVFKVG 245
[182][TOP]
>UniRef100_A5UU17 SSU ribosomal protein S1P n=1 Tax=Roseiflexus sp. RS-1
RepID=A5UU17_ROSS1
Length = 403
Score = 102 bits (253), Expect = 2e-20
Identities = 58/174 (33%), Positives = 96/174 (55%), Gaps = 17/174 (9%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++ + + LS+ + +W R +Q V++ ++VN NKGG++ ++G++GFV
Sbjct: 110 VVQSEDKEGRATLSIDRARQEKSWRRLQQCYETGEVIEARVVNYNKGGLLVNLDGVRGFV 169
Query: 185 PFSQISTKSTGEE---------LLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ------ 319
P SQ+S S G + ++ + + LK +E++ ++RLILS R+A D +
Sbjct: 170 PSSQVSGISRGSDTQKQSEMARMVGQTLMLKVIEINRNRNRLILSERQAAMDMREGRKGE 229
Query: 320 --GQLGIGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
L G V G V S+ +GAF+DIGG GL+H+S+IS RI VL+PG
Sbjct: 230 LLSALKEGDVREGIVTSVCDFGAFVDIGGADGLVHLSEISWSRIKHPGEVLKPG 283
Score = 59.3 bits (142), Expect = 1e-07
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQA---EDAVVKGKIVNANKGGVVAEVEGLK 175
+I N + + L LS + + R +L + E V +G + + G ++ G
Sbjct: 201 VIEINRNRNRLILSERQAAMDMREGRKGELLSALKEGDVREGIVTSVCDFGAFVDIGGAD 260
Query: 176 GFVPFSQIS---TKSTGEELLEKE-IPLKFVEVDEEQSRLILSHRKAVADSQGQLG---- 331
G V S+IS K GE L + + + + +D E+ R+ LS ++ + +G
Sbjct: 261 GLVHLSEISWSRIKHPGEVLKPGDKVQVYVLSIDNERKRIALSLKRTQHEPWATVGERYQ 320
Query: 332 IGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDRITDISTVLQPG 475
IG +V G V L P+GAF+ I G+ GL+HVS++ R+ VLQ G
Sbjct: 321 IGQMVEGVVTQLAPFGAFVRIEDGVEGLIHVSEMGDGRVQHPRDVLQEG 369
[183][TOP]
>UniRef100_A2REZ2 Putative 30S ribosomal protein S1 n=1 Tax=Streptococcus pyogenes
str. Manfredo RepID=A2REZ2_STRPG
Length = 401
Score = 102 bits (253), Expect = 2e-20
Identities = 57/167 (34%), Positives = 94/167 (56%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + E VKG A KGG+ E EGL+GF+
Sbjct: 76 VVGKDTDTVTFLVSKKRLEARKAWDKLVGREGEVVTVKG--TRAVKGGLSVEFEGLRGFI 133
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ--------GQLGI 334
P S I T+ E+ + +E K EVD ++R ILS R+ + ++ ++
Sbjct: 134 PASMIDTRFVRNTEKFVGQEFDAKIKEVDAAENRFILSRREVIEEAAKEARAEVFSKISE 193
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G+VVTG+V L +G FID+GG+ GL+HV+++SH+R +V+ G
Sbjct: 194 GAVVTGTVARLTSFGVFIDLGGVDGLVHVTELSHERNVSPKSVVSVG 240
Score = 67.8 bits (164), Expect = 4e-10
Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 14/140 (10%)
Frame = +2
Query: 98 AEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTK---------STGEELLEKEIPLK 250
+E AVV G + GV ++ G+ G V +++S + S GEE + +K
Sbjct: 192 SEGAVVTGTVARLTSFGVFIDLGGVDGLVHVTELSHERNVSPKSVVSVGEE-----VEVK 246
Query: 251 FVEVDEEQSRLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLL 415
+ +DEE R+ LS + + +L G VV G V+ L +GAF+++ GI GL+
Sbjct: 247 VLSIDEEAGRVSLSLKATTPGPWDGVEQKLAQGDVVEGKVKRLTDFGAFVEVLPGIDGLV 306
Query: 416 HVSQISHDRITDISTVLQPG 475
H+SQISH R+ + VL G
Sbjct: 307 HISQISHKRVENPKDVLSVG 326
[184][TOP]
>UniRef100_A3IEJ0 Ribosomal protein S1, putative n=1 Tax=Bacillus sp. B14905
RepID=A3IEJ0_9BACI
Length = 378
Score = 102 bits (253), Expect = 2e-20
Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 10/160 (6%)
Frame = +2
Query: 26 DDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQIST 205
++ LS + + AW+ Q + + ++ + KGG+V ++ G++GFVP S +
Sbjct: 75 EENFVLSKRKVDALKAWDTLEQQFTAGEIFEAEVKDIVKGGLVVDL-GVRGFVPASLVED 133
Query: 206 KSTG--EELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLGIGSVVTGS 355
E K + K VE+D+E++RLILSHR V + Q+ G V+ G
Sbjct: 134 YFVDDFEGYKGKTLSFKIVELDKEKNRLILSHRAVVESEKASQKQNVINQIKAGDVLDGK 193
Query: 356 VQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
VQ L +GAFID+GGI GL+H+SQ+SH+ ++D+S VL G
Sbjct: 194 VQRLASFGAFIDLGGIDGLVHISQVSHEHVSDVSEVLSEG 233
Score = 59.7 bits (143), Expect = 1e-07
Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 9/138 (6%)
Frame = +2
Query: 89 QLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQIS---TKSTGEELLEKE-IPLKFV 256
Q++A D V+ GK+ G ++ G+ G V SQ+S E L E + + +K +
Sbjct: 183 QIKAGD-VLDGKVQRLASFGAFIDLGGIDGLVHISQVSHEHVSDVSEVLSEGQGVTVKVL 241
Query: 257 EVDEEQSRLILSHRKAV----ADSQGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHV 421
VD R+ LS ++ + ++ + + G+++ G V+ L +GAF+++ G+ GL+H+
Sbjct: 242 SVDPANERISLSIKETIPGPWSNIEERAAKGAILDGKVKRLTSFGAFVEVFPGVEGLVHI 301
Query: 422 SQISHDRITDISTVLQPG 475
SQI+H I L+ G
Sbjct: 302 SQIAHKHINTPHEALKEG 319
[185][TOP]
>UniRef100_C7RHT6 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Anaerococcus
prevotii DSM 20548 RepID=C7RHT6_ANAPD
Length = 686
Score = 101 bits (252), Expect = 2e-20
Identities = 57/163 (34%), Positives = 91/163 (55%), Gaps = 6/163 (3%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
+I ++ + + LS + ++ W+ + D +V G + NKGG+ VEG+ GFV
Sbjct: 350 VIKLDDGEGNVSLSTRRVEGMKVWKDLAEKAENDELVHGVVSGFNKGGLTVNVEGINGFV 409
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG----QLGIGSVV 346
P SQI+T ++ + +E LK + +DE ++RL+LS ++ V D +L G VV
Sbjct: 410 PASQIATYFVKNFKKFVGEEWDLKIISIDERKNRLVLSRKEVVEDELDGLWEELEEGQVV 469
Query: 347 TGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
TG V L +GAF+++ G+ GLLHVS I+ R+ S VL G
Sbjct: 470 TGKVARLTDFGAFVEVNGLDGLLHVSDIAWSRVEHPSDVLNVG 512
Score = 65.5 bits (158), Expect = 2e-09
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSI---QFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLK 175
II +E + L LS K + + WE + Q VV GK+ G EV GL
Sbjct: 434 IISIDERKNRLVLSRKEVVEDELDGLWEELEEGQ----VVTGKVARLTDFGAFVEVNGLD 489
Query: 176 GFVPFSQI--STKSTGEELLE--KEIPLKFVEVDEEQSRLILSHRKAVADS----QGQLG 331
G + S I S ++L EI +K +++++E++R+ L ++ + Q
Sbjct: 490 GLLHVSDIAWSRVEHPSDVLNVGDEIEVKILKLNQEKNRISLGRKQLLEKPFEAFVNQHE 549
Query: 332 IGSVVTGSVQSLKPYGAFIDIG-GISGLLHVSQISHDRITDISTVLQPG 475
+G VVTG V +L +GAF+++ G+ GL+HVS+IS + + S L G
Sbjct: 550 VGDVVTGKVVNLLDFGAFVEVADGVEGLVHVSEISWEHVEKPSDELNVG 598
[186][TOP]
>UniRef100_C6SQ82 Putative ribosomal protein S1 n=2 Tax=Streptococcus mutans
RepID=C6SQ82_STRMN
Length = 399
Score = 101 bits (252), Expect = 2e-20
Identities = 56/167 (33%), Positives = 94/167 (56%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++G++ T +S K ++ AW++ + + VKG A KGG+ E EGL+GF+
Sbjct: 76 VVGKDTDTVTFLVSKKRLEARKAWDKLVGREGDVVTVKG--TRAVKGGLSVEFEGLRGFI 133
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHR--------KAVADSQGQLGI 334
P S I T+ E+ + ++ K E+D ++R ILS R KA + +L +
Sbjct: 134 PASMIDTRFVRNTEKFVGQQFEAKIKEIDPSENRFILSRRDVVEAAAAKAREEVFSRLAV 193
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G +VTG+V L +GAFID+GG+ GL+H++++SH+R +V+ G
Sbjct: 194 GDIVTGTVARLTSFGAFIDLGGVDGLVHITELSHERNVSPKSVVTVG 240
Score = 63.2 bits (152), Expect = 9e-09
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Frame = +2
Query: 110 VVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGEE----LLEKEIPLKFVEVDEEQS 277
+V G + G ++ G+ G V +++S + + +EI +K + +DEE
Sbjct: 196 IVTGTVARLTSFGAFIDLGGVDGLVHITELSHERNVSPKSVVTVGEEIQVKVLAIDEEAG 255
Query: 278 RLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDR 442
R+ LS + + +L G V+ G V+ L +GAF+++ GI GL+H+SQISH R
Sbjct: 256 RVSLSLKATTPGPWDGVEQKLAAGDVIEGKVKRLTDFGAFVEVLPGIDGLVHISQISHKR 315
Query: 443 ITDISTVLQPG 475
+ + VL G
Sbjct: 316 VENPKDVLSVG 326
[187][TOP]
>UniRef100_P38494 30S ribosomal protein S1 homolog n=1 Tax=Bacillus subtilis
RepID=RS1H_BACSU
Length = 382
Score = 101 bits (252), Expect = 2e-20
Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 10/160 (6%)
Frame = +2
Query: 26 DDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQIST 205
DD L LS +++ AWE + V + ++ + KGG+V ++ G++GF+P S +
Sbjct: 76 DDALILSKRAVDADRAWEDLEKKFETKEVFEAEVKDVVKGGLVVDI-GVRGFIPASLVEA 134
Query: 206 KSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQ--------LGIGSVVTGS 355
+ + K + L VE+D +++R+ILSHR V Q L +GSV+ G
Sbjct: 135 HFVEDFTDYKGKTLSLLVVELDRDKNRVILSHRAVVESEQANKKQELLQSLEVGSVLDGK 194
Query: 356 VQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
VQ L +GAF+DIGGI GL+H+SQ+SH + S V++ G
Sbjct: 195 VQRLTDFGAFVDIGGIDGLVHISQLSHSHVEKPSDVVEEG 234
Score = 64.7 bits (156), Expect = 3e-09
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 9/132 (6%)
Frame = +2
Query: 107 AVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE--ELLEK--EIPLKFVEVDEEQ 274
+V+ GK+ G ++ G+ G V SQ+S + +++E+ E+ +K + VD +
Sbjct: 189 SVLDGKVQRLTDFGAFVDIGGIDGLVHISQLSHSHVEKPSDVVEEGQEVKVKVLSVDRDN 248
Query: 275 SRLILSHRKAVADSQGQLGI----GSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHD 439
R+ LS + + Q+G G V+ G+VQ L +GAF++I G+ GL+H+SQIS+
Sbjct: 249 ERISLSIKDTLPGPWNQIGEKVKPGDVLEGTVQRLVSFGAFVEILPGVEGLVHISQISNK 308
Query: 440 RITDISTVLQPG 475
I VL+ G
Sbjct: 309 HIGTPHEVLEEG 320
[188][TOP]
>UniRef100_C1PEY3 RNA binding S1 domain protein n=1 Tax=Bacillus coagulans 36D1
RepID=C1PEY3_BACCO
Length = 378
Score = 101 bits (251), Expect = 3e-20
Identities = 56/160 (35%), Positives = 91/160 (56%), Gaps = 10/160 (6%)
Frame = +2
Query: 26 DDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQIST 205
+D + LS + AW+ ++ +++ ++ KGG+V ++ G++GFVP S +
Sbjct: 76 EDAVILSKRKYDAEKAWDELKEKFENQEIIEAEVNEVVKGGLVVDL-GVRGFVPASLVED 134
Query: 206 KSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVA--------DSQGQLGIGSVVTGS 355
+ + K +P VE+DE+++RLILSHR V D L G V+ G+
Sbjct: 135 HFVEDFSDYKGKTLPFLIVELDEDKNRLILSHRAVVEKEKEEKRQDILDHLEAGQVLEGT 194
Query: 356 VQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
VQ L +GAF+DIGGI GL+H+SQ++H+R+ S V+Q G
Sbjct: 195 VQRLTSFGAFVDIGGIDGLVHISQLAHERVETPSDVVQEG 234
Score = 60.8 bits (146), Expect = 4e-08
Identities = 36/131 (27%), Positives = 74/131 (56%), Gaps = 9/131 (6%)
Frame = +2
Query: 110 VVKGKIVNANKGGVVAEVEGLKGFVPFSQISTK--STGEELLEK--EIPLKFVEVDEEQS 277
V++G + G ++ G+ G V SQ++ + T +++++ ++ +K + VD +
Sbjct: 190 VLEGTVQRLTSFGAFVDIGGIDGLVHISQLAHERVETPSDVVQEGEQVKVKVLSVDRDNG 249
Query: 278 RLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDR 442
R+ LS + + + + G+V+TG+V+ L +GAF+++ G+ GL+H+SQISH
Sbjct: 250 RISLSIKDTLPGPWEGIEQKAPKGTVLTGTVKRLVSFGAFVEVFPGVEGLVHISQISHKH 309
Query: 443 ITDISTVLQPG 475
++ VL+ G
Sbjct: 310 VSTPHEVLREG 320
[189][TOP]
>UniRef100_A0ZM63 30S ribosomal protein S1 n=1 Tax=Nodularia spumigena CCY9414
RepID=A0ZM63_NODSP
Length = 284
Score = 101 bits (251), Expect = 3e-20
Identities = 50/159 (31%), Positives = 88/159 (55%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+II + +++ + LS K ++ WER ++ V+ ++ NKGGV ++ L+GF
Sbjct: 71 LIIRDQDAEGQVTLSRKQLEIQQVWERLTEMNEGGQTVQVRVTGVNKGGVTVDILSLRGF 130
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ-GQLGIGSVVTGSV 358
+P S ++ + E L + + + F+E++ ++LILS R A S L + +V G V
Sbjct: 131 IPRSHLAERDNLEALKGQSLTVAFLEINRNTNKLILSQRLATRSSSFSLLQLNQLVEGRV 190
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+KP+G F+D+ G+S LLH+ Q+S I + V Q G
Sbjct: 191 TGIKPFGIFVDLDGLSALLHIKQVSQKYIESLEKVFQIG 229
[190][TOP]
>UniRef100_B8G954 RNA binding S1 domain protein n=1 Tax=Chloroflexus aggregans DSM
9485 RepID=B8G954_CHLAD
Length = 400
Score = 100 bits (249), Expect = 5e-20
Identities = 54/174 (31%), Positives = 96/174 (55%), Gaps = 17/174 (9%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++ + + LS+ + +W ++ ++ ++ N NKGG++ +++G++GFV
Sbjct: 103 VVQSEDKEGRAILSIDKARQEKSWRALQEYYERGEIIYARVKNYNKGGLLVDLDGVRGFV 162
Query: 185 PFSQISTKSTGEE---------LLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ------ 319
P SQ+S+ S E L+ E+PLK +E++ ++RLILS R+A+ +++
Sbjct: 163 PASQVSSVSRASEAQKQSEMARLVNVELPLKVIEINRNRNRLILSERQALVETRETKKDE 222
Query: 320 --GQLGIGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
L G V G V S+ +G F+DIGG GL+H+S+IS R+ S VL+ G
Sbjct: 223 LLASLQEGDVREGVVSSVCDFGVFVDIGGADGLVHLSEISWSRVKHPSEVLKVG 276
Score = 56.2 bits (134), Expect = 1e-06
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Frame = +2
Query: 101 EDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQIS---TKSTGEEL-LEKEIPLKFVEVDE 268
E V +G + + GV ++ G G V S+IS K E L + ++ + + +D
Sbjct: 229 EGDVREGVVSSVCDFGVFVDIGGADGLVHLSEISWSRVKHPSEVLKVGDKVKVSILNIDH 288
Query: 269 EQSRLILSHRKAVADSQGQLG----IGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQIS 433
E+ R+ LS ++ ++ ++ +G +V G+V L +GAF+ I G+ GL+HVS++
Sbjct: 289 ERKRIALSIKRTQSEPWTRVAERYQLGQIVEGTVTQLASFGAFVRIEDGVEGLIHVSEMG 348
Query: 434 HDRITDISTVLQPG 475
+RI VL G
Sbjct: 349 DERIQHPRDVLSEG 362
[191][TOP]
>UniRef100_A2BQ11 30S ribosomal protein S1 protein B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. AS9601
RepID=A2BQ11_PROMS
Length = 401
Score = 100 bits (248), Expect = 7e-20
Identities = 50/159 (31%), Positives = 90/159 (56%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++I E +D + +S +++ +WE+ ++ I N+GG+ +V+GL+GF
Sbjct: 183 LVIKEQNADGMVTVSARALILRQSWEKVSNSAKNGELINVLINGFNRGGLTCDVDGLRGF 242
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKA-VADSQGQLGIGSVVTGSV 358
+P SQ+ + + K + + F+EV+ E +L+LS +KA + L +G ++ G V
Sbjct: 243 IPRSQLEDGQDYQSFVGKNLKVAFLEVNPESRKLVLSEKKASLVSKLTSLELGQLIEGEV 302
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG FID+GG SGLLH S +++ I + V + G
Sbjct: 303 LAVKPYGFFIDLGGASGLLHQSSLTNGSIRSLREVFREG 341
[192][TOP]
>UniRef100_B0NZX2 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1
RepID=B0NZX2_9CLOT
Length = 235
Score = 100 bits (248), Expect = 7e-20
Identities = 56/146 (38%), Positives = 89/146 (60%), Gaps = 12/146 (8%)
Frame = +2
Query: 74 WERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGEEL---LEKEIP 244
W R Q++ + V+ + GGV+ VEG++GF+P S +STK E+L L+K++
Sbjct: 34 WNRLEQMKEDGDVLALTVGGVVNGGVIVYVEGIRGFIPASLLSTKYV-EDLNVWLQKDVE 92
Query: 245 LKFVEVDEEQSRLILS--------HRKAVADSQGQLGIGSVVTGSVQSLKPYGAFIDIG- 397
K + V+ E+ RL+LS RK + +L +G+VV G+V+++ PYGAF+DIG
Sbjct: 93 AKIITVEPEEQRLVLSAKAVEKEKERKERENKINELKVGTVVEGTVENIMPYGAFVDIGD 152
Query: 398 GISGLLHVSQISHDRITDISTVLQPG 475
GISGL+H+SQ+S R+ V++ G
Sbjct: 153 GISGLVHISQLSQKRVKSPEEVVKEG 178
[193][TOP]
>UniRef100_Q83HP3 30s ribosomal protein S1 n=1 Tax=Tropheryma whipplei TW08/27
RepID=Q83HP3_TROW8
Length = 473
Score = 99.8 bits (247), Expect = 9e-20
Identities = 56/168 (33%), Positives = 94/168 (55%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ + +S L LS K Q+ AW +++ D V GK++ +GG++ ++ GL+GF
Sbjct: 82 LVFQKEDSQGRLILSKKRAQYEKAWSDLEKIKDSDLTVTGKVIEIVRGGLIVDI-GLRGF 140
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ--------GQLG 331
+P S I + + L EI K +E+D +++ ++LS R + +Q G L
Sbjct: 141 LPASLIDIRRVRDLSSYLGMEIEAKVLELDRQRNNVVLSRRVLLEQNQSEARTSLFGNLH 200
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G V G+V S+ +GAF+D+GGI GL+H+S+IS +T S VL+ G
Sbjct: 201 KGQVRKGTVSSIVSFGAFVDLGGIDGLVHISEISWKHVTQPSEVLKVG 248
[194][TOP]
>UniRef100_Q83GI6 30S ribosomal protein S1 n=1 Tax=Tropheryma whipplei str. Twist
RepID=Q83GI6_TROWT
Length = 473
Score = 99.8 bits (247), Expect = 9e-20
Identities = 56/168 (33%), Positives = 94/168 (55%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ + +S L LS K Q+ AW +++ D V GK++ +GG++ ++ GL+GF
Sbjct: 82 LVFQKEDSQGRLILSKKRAQYEKAWSDLEKIKDSDLTVTGKVIEIVRGGLIVDI-GLRGF 140
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ--------GQLG 331
+P S I + + L EI K +E+D +++ ++LS R + +Q G L
Sbjct: 141 LPASLIDIRRVRDLSSYLGMEIEAKVLELDRQRNNVVLSRRVLLEQNQSEARTSLFGNLH 200
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G V G+V S+ +GAF+D+GGI GL+H+S+IS +T S VL+ G
Sbjct: 201 KGQVRKGTVSSIVSFGAFVDLGGIDGLVHISEISWKHVTQPSEVLKVG 248
[195][TOP]
>UniRef100_B1XJQ5 30S ribosomal protein S1 like protein n=1 Tax=Synechococcus sp. PCC
7002 RepID=B1XJQ5_SYNP2
Length = 296
Score = 99.8 bits (247), Expect = 9e-20
Identities = 52/159 (32%), Positives = 98/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++ G+N ++ + LS + + WE Q V+ ++ +N+GGV +++GL+GF
Sbjct: 84 IVRGQN-AEGQVTLSRRKLAEQRVWEDLAQAAEAGNSVQMRVTGSNRGGVTGDIQGLRGF 142
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAV-ADSQGQLGIGSVVTGSV 358
+P S + K+ ++L+ + + + F+E D+E+ +L+LS R A A+ +L IG++V+G+V
Sbjct: 143 IPNSHLVDKNI-DDLMGQLLTVNFLEFDQERRKLVLSQRYAAQAEVMRRLSIGALVSGTV 201
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG F+++ G++GLLH SQIS + I + G
Sbjct: 202 VNIKPYGVFVELDGMTGLLHRSQISAKPVEQIEALFSIG 240
[196][TOP]
>UniRef100_A9AV75 RNA binding S1 domain protein n=1 Tax=Herpetosiphon aurantiacus
ATCC 23779 RepID=A9AV75_HERA2
Length = 415
Score = 99.8 bits (247), Expect = 9e-20
Identities = 56/174 (32%), Positives = 97/174 (55%), Gaps = 17/174 (9%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++ +++ + LS+ + +W + V+ + N NKGG++ + G++GFV
Sbjct: 107 VVQTEDAEGRIVLSIDKARQEKSWRALQVNHEAGDVIHAAVTNYNKGGLLVNLSGVRGFV 166
Query: 185 PFSQISTKSTGEE---------LLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG----- 322
P SQ+S+ S G + L+ + +PLK +E++ ++RLILS R+AV + +
Sbjct: 167 PSSQVSSVSRGSDVQKQSDMAKLVGQTLPLKIIEINRSRNRLILSERQAVQEVRDSRKDQ 226
Query: 323 ---QLGIGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+L G+V TG V SL +GAF+DIGG GL+H+S++S R+ VL+ G
Sbjct: 227 LLEKLEPGAVRTGRVTSLCDFGAFVDIGGADGLVHLSELSWSRVKHPEEVLKVG 280
Score = 55.8 bits (133), Expect = 1e-06
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAE---DAVVKGKIVNANKGGVVAEVEGLK 175
II N S + L LS + + R QL + AV G++ + G ++ G
Sbjct: 198 IIEINRSRNRLILSERQAVQEVRDSRKDQLLEKLEPGAVRTGRVTSLCDFGAFVDIGGAD 257
Query: 176 GFVPFSQISTKSTG--EELLE--KEIPLKFVEVDEEQSRLILSHRKAVADS----QGQLG 331
G V S++S EE+L+ + + + VDE++ R+ LS ++ A+ +
Sbjct: 258 GLVHLSELSWSRVKHPEEVLKVGDAVSVYILSVDEDKKRIALSIKRTQAEPWTTVTDRYQ 317
Query: 332 IGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDRITDISTVLQPG 475
IG V+G V L +GAF+ + GI GL+H+S++S +RI V+ G
Sbjct: 318 IGQSVSGVVTQLTAFGAFVRLEDGIEGLIHISEMSDERIQHPRDVINEG 366
[197][TOP]
>UniRef100_A8G3P5 Ribosomal protein S1 n=1 Tax=Prochlorococcus marinus str. MIT 9215
RepID=A8G3P5_PROM2
Length = 400
Score = 99.8 bits (247), Expect = 9e-20
Identities = 50/159 (31%), Positives = 90/159 (56%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++I E +D + +S +++ +WE+ ++ I N+GG+ +V+GL+GF
Sbjct: 182 LVIKEQNADGMVTVSARALILRQSWEKVSSSAKNGELINVLINGFNRGGLTCDVDGLRGF 241
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKA-VADSQGQLGIGSVVTGSV 358
+P SQ+ + + K + + F+EV+ E +L+LS +KA + L +G ++ G V
Sbjct: 242 IPRSQLEDGQDYQSFVGKTLKVAFLEVNPESRKLVLSEKKASLVSKLTNLELGQLIEGEV 301
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG FID+GG SGLLH S +++ I + V + G
Sbjct: 302 LAVKPYGFFIDLGGASGLLHQSSLTNGSIRSLREVFREG 340
[198][TOP]
>UniRef100_A3PBQ4 30S ribosomal protein S1-like protein B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. MIT 9301
RepID=A3PBQ4_PROM0
Length = 401
Score = 99.8 bits (247), Expect = 9e-20
Identities = 50/159 (31%), Positives = 90/159 (56%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++I E +D + +S +++ +WE+ ++ I N+GG+ +V+GL+GF
Sbjct: 183 LVIKEQNADGMVTVSARALILRQSWEKVSSSAKNGELINVLINGFNRGGLTCDVDGLRGF 242
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKA-VADSQGQLGIGSVVTGSV 358
+P SQ+ + + K + + F+EV+ E +L+LS +KA + L +G ++ G V
Sbjct: 243 IPRSQLEDGQDYQSFVGKTLKVAFLEVNPESRKLVLSEKKASLVSKLTSLELGQLIEGEV 302
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG FID+GG SGLLH S +++ I + V + G
Sbjct: 303 LAVKPYGFFIDLGGASGLLHQSSLTNGSIRSLREVFREG 341
[199][TOP]
>UniRef100_C6JH83 Putative uncharacterized protein n=1 Tax=Ruminococcus sp.
5_1_39BFAA RepID=C6JH83_9FIRM
Length = 302
Score = 99.8 bits (247), Expect = 9e-20
Identities = 63/172 (36%), Positives = 102/172 (59%), Gaps = 15/172 (8%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAE----DAVVKGKIVNANKGGVVAEVEGL 172
++ +++ + + LS LAW++ ++L+ D VVKG IVN GGV+A VEG+
Sbjct: 76 VVRKDDGNGNILLSRTEAADVLAWDKLKELKDSKEVIDVVVKG-IVN---GGVIAYVEGV 131
Query: 173 KGFVPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ--------G 322
+GF+P S+++ + E L K I ++ ++D+E+ RLILS ++ + +
Sbjct: 132 RGFIPASKLALNYVEDTNEYLNKPIQVQVFDIDKEKGRLILSAKEILREKAEEERKTKIS 191
Query: 323 QLGIGSVVTGSVQSLKPYGAFIDIG-GISGLLHVSQISHDRITDISTVLQPG 475
+ +G V G V+SL+PYGAF+D+G G+SGL+H+SQI RI S VL G
Sbjct: 192 NVQVGLVTEGVVESLQPYGAFVDLGNGLSGLVHISQICEKRIKKPSEVLTVG 243
[200][TOP]
>UniRef100_C2CFD8 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1
Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CFD8_9FIRM
Length = 687
Score = 99.8 bits (247), Expect = 9e-20
Identities = 55/163 (33%), Positives = 91/163 (55%), Gaps = 6/163 (3%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
+I ++ + + LS + ++ W+ Q D +V G++V+ NKGG+ V G+ GFV
Sbjct: 350 VIKLDDGEGNVALSTRRVEGMKVWQELAQKAENDELVHGEVVSFNKGGLTVNVNGVNGFV 409
Query: 185 PFSQIST--KSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADS----QGQLGIGSVV 346
P SQI+T ++ + ++ LK + +DE ++RL+LS + V + +L G VV
Sbjct: 410 PASQIATYFVKNFKKFVGEQWDLKIISIDERKNRLVLSRKDVVEEELDNLWDELEEGQVV 469
Query: 347 TGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G V L +GAF+++ G+ GLLHVS I+ R+ S VL G
Sbjct: 470 KGKVARLTDFGAFVEVNGLDGLLHVSDIAWSRVEHPSDVLSVG 512
Score = 65.5 bits (158), Expect = 2e-09
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSI---QFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLK 175
II +E + L LS K + + W+ + Q VVKGK+ G EV GL
Sbjct: 434 IISIDERKNRLVLSRKDVVEEELDNLWDELEEGQ----VVKGKVARLTDFGAFVEVNGLD 489
Query: 176 GFVPFSQI--STKSTGEELLE--KEIPLKFVEVDEEQSRLILSHRKAVADSQGQLG---- 331
G + S I S ++L EI +K +++++E++R+ L ++ +
Sbjct: 490 GLLHVSDIAWSRVEHPSDVLSVGDEIEVKILKLNQEKNRISLGRKQLLEKPFEAFANHHE 549
Query: 332 IGSVVTGSVQSLKPYGAFIDIG-GISGLLHVSQISHDRITDISTVLQPG 475
+G VVTG V +L +GAF+++ G+ GL+HVS+IS + + S L G
Sbjct: 550 VGDVVTGKVVNLLDFGAFVEVADGVEGLVHVSEISWEHVEKPSDELNVG 598
[201][TOP]
>UniRef100_C2BDN4 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1
Tax=Anaerococcus lactolyticus ATCC 51172
RepID=C2BDN4_9FIRM
Length = 692
Score = 99.8 bits (247), Expect = 9e-20
Identities = 56/163 (34%), Positives = 92/163 (56%), Gaps = 6/163 (3%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
+I ++ + + LS + ++ AW+ + +V GK+++ NKGG+ EV G+ GFV
Sbjct: 353 VIKLDDGEGNVSLSTRRVEGMKAWKELSDKFENEELVHGKVISFNKGGLTVEVNGVNGFV 412
Query: 185 PFSQIST--KSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVA----DSQGQLGIGSVV 346
P SQI+T ++ + +E LK + +DE ++RL+LS + + D +L G VV
Sbjct: 413 PASQIATYFVKNLKKFVGEEWDLKIISIDERKNRLVLSRKDVLEAELDDLWDELEEGQVV 472
Query: 347 TGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G V L +GAF+++ G+ GLLHVS I+ R+ S VL G
Sbjct: 473 KGKVARLTDFGAFVEVNGLDGLLHVSDIAWTRVEHPSDVLNVG 515
[202][TOP]
>UniRef100_B9P0S4 RNA binding S1 n=1 Tax=Prochlorococcus marinus str. MIT 9202
RepID=B9P0S4_PROMA
Length = 401
Score = 99.8 bits (247), Expect = 9e-20
Identities = 50/159 (31%), Positives = 90/159 (56%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++I E +D + +S +++ +WE+ ++ I N+GG+ +V+GL+GF
Sbjct: 183 LVIKEQNADGMVTVSARALILRQSWEKVSSSAKNGELINVLINGFNRGGLTCDVDGLRGF 242
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKA-VADSQGQLGIGSVVTGSV 358
+P SQ+ + + K + + F+EV+ E +L+LS +KA + L +G ++ G V
Sbjct: 243 IPRSQLEDGQDYQSFVGKTLKVAFLEVNPESRKLVLSEKKASLVSKLTSLELGQLIEGEV 302
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG FID+GG SGLLH S +++ I + V + G
Sbjct: 303 LAVKPYGFFIDLGGASGLLHQSSLTNGSIRSLREVFREG 341
[203][TOP]
>UniRef100_Q8EQA5 30S ribosomal protein S1 n=1 Tax=Oceanobacillus iheyensis
RepID=Q8EQA5_OCEIH
Length = 376
Score = 99.4 bits (246), Expect = 1e-19
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 10/160 (6%)
Frame = +2
Query: 26 DDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQIST 205
DD + LS ++I AWE Q + KGG+V +V G++GF+P S + T
Sbjct: 73 DDEIILSKRAIDSETAWEELEQKYNSGEAFDTTVKEVVKGGLVVDV-GVRGFIPASLVET 131
Query: 206 KSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQ--------LGIGSVVTGS 355
+ + L K + +K ++D Q+R+ILSHR V D + L G V+ G+
Sbjct: 132 YYVEDFSDYLNKTLKVKIADLDRSQNRVILSHRAIVEDEEKNRKNDVLQSLEPGQVIEGT 191
Query: 356 VQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
VQ + +GAF+D+GG+ GL+H+SQ++H+ + S V+ G
Sbjct: 192 VQRITNFGAFVDLGGVDGLVHISQLAHEHVEKTSDVVSEG 231
Score = 62.0 bits (149), Expect = 2e-08
Identities = 38/131 (29%), Positives = 74/131 (56%), Gaps = 9/131 (6%)
Frame = +2
Query: 110 VVKGKIVNANKGGVVAEVEGLKGFVPFSQIS---TKSTGEELLEKE-IPLKFVEVDEEQS 277
V++G + G ++ G+ G V SQ++ + T + + E + I ++ + VD +
Sbjct: 187 VIEGTVQRITNFGAFVDLGGVDGLVHISQLAHEHVEKTSDVVSEGDKIKVEVLSVDLDNE 246
Query: 278 RLILSHRKAV----ADSQGQLGIGSVVTGSVQSLKPYGAFID-IGGISGLLHVSQISHDR 442
R+ LSH+ + A+ + Q+ +GS + G+V+ L +GAF++ + G+ GL+H+SQI++
Sbjct: 247 RISLSHKNTLPGPWANVEEQVKVGSTIEGTVKRLVSFGAFVELLPGVEGLVHISQIANRH 306
Query: 443 ITDISTVLQPG 475
I VL+ G
Sbjct: 307 IGTPQEVLEIG 317
[204][TOP]
>UniRef100_B8HSI0 RNA binding S1 domain protein n=1 Tax=Cyanothece sp. PCC 7425
RepID=B8HSI0_CYAP4
Length = 292
Score = 99.4 bits (246), Expect = 1e-19
Identities = 48/159 (30%), Positives = 88/159 (55%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+II +++ + LSLK ++ WER + LQ + ++ NKGG+ + +G++GF
Sbjct: 76 LIIRGQDAEGQISLSLKRLEIKALWERYQSLQESQGAIDVRVTGVNKGGLTVDAKGIRGF 135
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQ-LGIGSVVTGSV 358
+P + + T E L+ + + + +E D E+ RL+ S + A + Q G +V G+V
Sbjct: 136 IPRTHVVGAETLESLVGQTLTVTILEADPERKRLVCSQKIARRQQRLQEFDYGQLVQGTV 195
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+ ++PYG ID+ G+ GLLH++ S R+ + +Q G
Sbjct: 196 RDIRPYGLMIDLTGVLGLLHINDFSEKRVGSLQAHVQVG 234
[205][TOP]
>UniRef100_A7Z639 YpfD n=1 Tax=Bacillus amyloliquefaciens FZB42 RepID=A7Z639_BACA2
Length = 382
Score = 99.4 bits (246), Expect = 1e-19
Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 10/160 (6%)
Frame = +2
Query: 26 DDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQIST 205
DD L LS +++ AWE + V + ++ + KGG+V ++ G++GF+P S +
Sbjct: 76 DDALILSKRAVDADRAWEDLEKKFDTKEVFEAEVKDVVKGGLVVDI-GVRGFIPASLVEA 134
Query: 206 KSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQ--------LGIGSVVTGS 355
+ + K + L VE+D +++R+ILSHR V Q L +GSV+ G
Sbjct: 135 HFVEDFTDYKGKTLSLIVVELDRDKNRVILSHRAVVEKEQTAKKHDFLQTLEVGSVLEGK 194
Query: 356 VQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
VQ L +GAF+DIGGI GL+H+SQ+SH + S V++ G
Sbjct: 195 VQRLTDFGAFVDIGGIDGLVHISQLSHSHVEKPSDVVEEG 234
Score = 64.3 bits (155), Expect = 4e-09
Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Frame = +2
Query: 107 AVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE--ELLEK--EIPLKFVEVDEEQ 274
+V++GK+ G ++ G+ G V SQ+S + +++E+ ++ +K + VD +
Sbjct: 189 SVLEGKVQRLTDFGAFVDIGGIDGLVHISQLSHSHVEKPSDVVEEGQDVKVKVLSVDRDN 248
Query: 275 SRLILSHRKAVADSQGQLGI----GSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHD 439
R+ LS ++ + Q+G G V+ G VQ L +GAF++I G+ GL+H+SQIS+
Sbjct: 249 ERISLSIKETLPGPWSQVGEKVKQGDVLEGKVQRLVSFGAFVEILPGVEGLVHISQISNK 308
Query: 440 RITDISTVLQPG 475
I VL+ G
Sbjct: 309 HIGTPHEVLEEG 320
[206][TOP]
>UniRef100_C2HGK6 Possible 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1
Tax=Finegoldia magna ATCC 53516 RepID=C2HGK6_PEPMA
Length = 675
Score = 99.4 bits (246), Expect = 1e-19
Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 15/172 (8%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
+I ++ + + LS K ++ W+ D+ V+ K+ KGG++A ++ ++ F+
Sbjct: 347 VIKLDDGEGNVVLSTKRVEGIKNWKNLVSSFDNDSTVEAKVTQVVKGGLIATIDNVRAFI 406
Query: 185 PFSQIST-------KSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLG---- 331
P SQ++T K GE L+ K + +DE++ RL+LSHR V Q ++
Sbjct: 407 PGSQVTTHFVKDLSKYVGETLV-----CKVLNIDEKKRRLVLSHRAVVEAEQKEIEDKAW 461
Query: 332 ----IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+G +TG VQ L +GAFID+GG+ GLLH+S IS +RI VL+ G
Sbjct: 462 ENITVGETITGKVQRLTDFGAFIDLGGVDGLLHISDISWNRIESPEDVLKVG 513
[207][TOP]
>UniRef100_Q65I09 Nucleic acid-binding protein n=1 Tax=Bacillus licheniformis ATCC
14580 RepID=Q65I09_BACLD
Length = 382
Score = 99.0 bits (245), Expect = 1e-19
Identities = 56/160 (35%), Positives = 89/160 (55%), Gaps = 10/160 (6%)
Frame = +2
Query: 26 DDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQIST 205
DD L LS +++ AWE + V + ++ + KGG+V ++ G++GF+P S +
Sbjct: 76 DDALILSKRAVDADRAWEDLEKKFESKEVFEAEVKDVVKGGLVVDI-GVRGFIPASLVEA 134
Query: 206 KSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQ--------LGIGSVVTGS 355
+ + K + L VE+D +++R+ILSHR V Q + L G V+ G
Sbjct: 135 HFVEDFTDYKGKTLTLIVVELDRDKNRVILSHRAVVEKEQSERKQEFLQTLEAGQVLEGK 194
Query: 356 VQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
VQ L +GAF+DIGGI GL+H+SQ+SH + S V++ G
Sbjct: 195 VQRLTDFGAFVDIGGIDGLVHISQLSHSHVEKPSDVVEEG 234
Score = 62.0 bits (149), Expect = 2e-08
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 9/131 (6%)
Frame = +2
Query: 110 VVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE--ELLEK--EIPLKFVEVDEEQS 277
V++GK+ G ++ G+ G V SQ+S + +++E+ ++ +K + VD +
Sbjct: 190 VLEGKVQRLTDFGAFVDIGGIDGLVHISQLSHSHVEKPSDVVEEGQDVKVKVLSVDRDNE 249
Query: 278 RLILSHRKAVADSQGQLGI----GSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDR 442
R+ LS ++ + +G G V+ G VQ L +GAF+++ G+ GL+H+SQIS+
Sbjct: 250 RISLSIKETLPGPWSNIGEKVKPGDVLDGKVQRLVSFGAFVEVLPGVEGLVHISQISNKH 309
Query: 443 ITDISTVLQPG 475
I VL+ G
Sbjct: 310 IGTPHEVLEEG 320
[208][TOP]
>UniRef100_A4T9S5 SSU ribosomal protein S1P n=1 Tax=Mycobacterium gilvum PYR-GCK
RepID=A4T9S5_MYCGI
Length = 481
Score = 99.0 bits (245), Expect = 1e-19
Identities = 54/168 (32%), Positives = 96/168 (57%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW +L+ +D VKG ++ KGG++ ++ GL+GF
Sbjct: 89 LVLTKEDKEGRLILSKKRAQYERAWGTIEELKEKDEAVKGTVIEVVKGGLILDI-GLRGF 147
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLG 331
+P S + + + + KEI K +E+D+ ++ ++LS R + +Q QL
Sbjct: 148 LPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLNQLT 207
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G++ G V S+ +GAF+D+GG+ GL+HVS++S I S V+Q G
Sbjct: 208 KGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVG 255
Score = 54.7 bits (130), Expect = 3e-06
Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Frame = +2
Query: 107 AVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE--ELLE--KEIPLKFVEVDEEQ 274
A+ KG + + G ++ G+ G V S++S K E+++ E+ ++ ++VD ++
Sbjct: 210 AIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVGDEVTVEVLDVDMDR 269
Query: 275 SRLILSHRKAVADSQGQLG----IGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHD 439
R+ LS + D IG +V G V L P+GAF+ + GI GL+H+S++S
Sbjct: 270 ERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTKLVPFGAFVRVEEGIEGLVHISELSER 329
Query: 440 RITDISTVLQPG 475
+ V+Q G
Sbjct: 330 HVEVPDQVVQVG 341
[209][TOP]
>UniRef100_A1TAF3 SSU ribosomal protein S1P n=1 Tax=Mycobacterium vanbaalenii PYR-1
RepID=A1TAF3_MYCVP
Length = 481
Score = 99.0 bits (245), Expect = 1e-19
Identities = 54/168 (32%), Positives = 96/168 (57%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW +L+ +D VKG ++ KGG++ ++ GL+GF
Sbjct: 89 LVLTKEDKEGRLILSKKRAQYERAWGTIEELKEKDEAVKGTVIEVVKGGLILDI-GLRGF 147
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLG 331
+P S + + + + KEI K +E+D+ ++ ++LS R + +Q QL
Sbjct: 148 LPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLNQLT 207
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G++ G V S+ +GAF+D+GG+ GL+HVS++S I S V+Q G
Sbjct: 208 KGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVG 255
Score = 54.7 bits (130), Expect = 3e-06
Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Frame = +2
Query: 107 AVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE--ELLE--KEIPLKFVEVDEEQ 274
A+ KG + + G ++ G+ G V S++S K E+++ E+ ++ ++VD ++
Sbjct: 210 AIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVGDEVTVEVLDVDMDR 269
Query: 275 SRLILSHRKAVADSQGQLG----IGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHD 439
R+ LS + D IG +V G V L P+GAF+ + GI GL+H+S++S
Sbjct: 270 ERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTKLVPFGAFVRVEEGIEGLVHISELSER 329
Query: 440 RITDISTVLQPG 475
+ V+Q G
Sbjct: 330 HVEVPDQVVQVG 341
[210][TOP]
>UniRef100_A0QYY6 30S ribosomal protein S1 n=1 Tax=Mycobacterium smegmatis str. MC2
155 RepID=A0QYY6_MYCS2
Length = 479
Score = 99.0 bits (245), Expect = 1e-19
Identities = 54/168 (32%), Positives = 96/168 (57%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW +L+ +D VKG ++ KGG++ ++ GL+GF
Sbjct: 89 LVLTKEDKEGRLILSKKRAQYERAWGTIEELKEKDEAVKGTVIEVVKGGLILDI-GLRGF 147
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLG 331
+P S + + + + KEI K +E+D+ ++ ++LS R + +Q QL
Sbjct: 148 LPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLNQLQ 207
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G++ G V S+ +GAF+D+GG+ GL+HVS++S I S V+Q G
Sbjct: 208 KGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVG 255
Score = 56.6 bits (135), Expect = 8e-07
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 9/152 (5%)
Frame = +2
Query: 47 LKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE-- 220
L+ Q + E QLQ + A+ KG + + G ++ G+ G V S++S K
Sbjct: 191 LEQTQSEVRSEFLNQLQ-KGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPS 249
Query: 221 ELLE--KEIPLKFVEVDEEQSRLILSHRKAVADSQGQLG----IGSVVTGSVQSLKPYGA 382
E+++ E+ ++ ++VD ++ R+ LS + D IG +V G V L P+GA
Sbjct: 250 EVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTKLVPFGA 309
Query: 383 FIDI-GGISGLLHVSQISHDRITDISTVLQPG 475
F+ + GI GL+H+S++S + V+Q G
Sbjct: 310 FVRVEEGIEGLVHISELSERHVEVPDQVVQVG 341
[211][TOP]
>UniRef100_Q31C04 SSU ribosomal protein S1P n=1 Tax=Prochlorococcus marinus str. MIT
9312 RepID=Q31C04_PROM9
Length = 404
Score = 98.6 bits (244), Expect = 2e-19
Identities = 49/159 (30%), Positives = 89/159 (55%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
++I E +D + +S +++ +WE+ ++ I N+GG+ +V+GL+GF
Sbjct: 186 LVIKEQNADGMVTVSARALILRQSWEKVSNSAKNGELIDVLINGFNRGGLTCDVDGLRGF 245
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKA-VADSQGQLGIGSVVTGSV 358
+P SQ+ + + K + + F+EV+ E +L+LS +KA + L +G ++ G V
Sbjct: 246 IPRSQLEDGQDYQSFVGKTLKVAFLEVNPESRKLVLSEKKASLVSKLTSLDLGQLIEGEV 305
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
++KPYG FID+GG SGLLH S ++ I + + + G
Sbjct: 306 LAVKPYGFFIDLGGASGLLHQSSLTKGSIRSLREIFREG 344
[212][TOP]
>UniRef100_B2J5C5 RNA binding S1 domain protein n=1 Tax=Nostoc punctiforme PCC 73102
RepID=B2J5C5_NOSP7
Length = 312
Score = 98.6 bits (244), Expect = 2e-19
Identities = 52/138 (37%), Positives = 85/138 (61%)
Frame = +2
Query: 32 TLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKS 211
T+ S++ ++ AWER RQLQAED V GKI+N G + ++EGL G + K
Sbjct: 142 TVSFSIRKLEMRKAWERLRQLQAEDVTVYGKILNKTWSGALVKIEGLYGGI--RSYVNKH 199
Query: 212 TGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLGIGSVVTGSVQSLKPYGAFID 391
+ ++ +++PLK ++V EE ++L+L HR +V+ QL +G VV+G+++ +K YG F+D
Sbjct: 200 KEQLVVGEKLPLKIIKVREEYNQLVLIHR-SVSIRLRQLQVGQVVSGTIRGIKDYGVFVD 258
Query: 392 IGGISGLLHVSQISHDRI 445
IG LL S++ H +
Sbjct: 259 IGDFYALLPTSKMFHPSV 276
[213][TOP]
>UniRef100_B1MAV6 30S ribosomal protein S1 n=1 Tax=Mycobacterium abscessus ATCC 19977
RepID=B1MAV6_MYCA9
Length = 481
Score = 98.6 bits (244), Expect = 2e-19
Identities = 54/168 (32%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW +L+ +D VKG ++ KGG++ ++ GL+GF
Sbjct: 89 LVLTKEDKEGRLILSKKRAQYERAWGTIEELKEKDEAVKGTVIEVVKGGLILDI-GLRGF 147
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLG 331
+P S + + + + KEI K +E+D ++ ++LS R + +Q QL
Sbjct: 148 LPASLVEMRRVRDLQPYIGKEIEAKIIELDRNRNNVVLSRRAWLEQTQSEVRSEFLNQLT 207
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G++ G V S+ +GAF+D+GG+ GL+HVS++S I S V+Q G
Sbjct: 208 KGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVG 255
[214][TOP]
>UniRef100_B0S1K4 Fusion penicillin tolerance LytB domain and 30S ribosomal protein
S1 n=1 Tax=Finegoldia magna ATCC 29328
RepID=B0S1K4_FINM2
Length = 675
Score = 98.6 bits (244), Expect = 2e-19
Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 15/172 (8%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
+I ++ + + LS K ++ W+ D+ V+ K+ KGG++A ++ ++ F+
Sbjct: 347 VIKLDDGEGNVVLSTKRVEGIKNWKNLVSSFDNDSTVEAKVTQVVKGGLIATIDNVRAFI 406
Query: 185 PFSQIST-------KSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLG---- 331
P SQ++T K GE L+ K + +DE++ RL+LSHR V Q ++
Sbjct: 407 PGSQVTTHFVKDLSKYVGETLV-----CKVLNIDEKKRRLVLSHRAVVEAEQKEIEDKAW 461
Query: 332 ----IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+G +TG VQ L +GAFID+GG+ GLLH+S IS +RI VL+ G
Sbjct: 462 ENITVGEKITGKVQRLTDFGAFIDLGGVDGLLHISDISWNRIESPEDVLKVG 513
[215][TOP]
>UniRef100_C8XAW8 RNA binding S1 domain protein n=1 Tax=Nakamurella multipartita DSM
44233 RepID=C8XAW8_9ACTO
Length = 485
Score = 98.6 bits (244), Expect = 2e-19
Identities = 52/168 (30%), Positives = 97/168 (57%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW +++ ED VV G ++ KGG++ ++ GL+GF
Sbjct: 89 LVLQKEDKEGRLILSKKRAQYERAWGTIEKIKEEDGVVSGTVIEVVKGGLILDI-GLRGF 147
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLG 331
+P S + + + + +++ K +E+D+ ++ ++LS R+ + +Q QLG
Sbjct: 148 LPASLVEMRRVRDLQPYVGRQLDAKIIELDKNRNNVVLSRRQWLEQTQSEVRSEFLNQLG 207
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G V G V S+ +GAF+D+GG+ GL+HVS++S I S V++ G
Sbjct: 208 KGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVEVG 255
[216][TOP]
>UniRef100_C4FR40 Putative uncharacterized protein n=1 Tax=Veillonella dispar ATCC
17748 RepID=C4FR40_9FIRM
Length = 632
Score = 98.6 bits (244), Expect = 2e-19
Identities = 55/168 (32%), Positives = 93/168 (55%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
VI+ + D+ ++LS+ + W+ + Q +D + K ++A G+V V+ L+GF
Sbjct: 344 VIMNHIKEDNPIYLSMTRLAKDEDWQYVIEAQEKDEAIVCKGIDAIPAGLVVTVKSLRGF 403
Query: 182 VPFSQ--ISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAV--------ADSQGQLG 331
+P SQ + + + L+ E K +E+DE+++RL+LS R + A++ +
Sbjct: 404 IPLSQGDVHFVKSLDNLVGTEFEAKVLEIDEKKNRLVLSRRAVLEVERQAKLAEALKNIN 463
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+G G V+ + PYGAF+DIGGI GLLH+S IS +I + VL G
Sbjct: 464 VGDNYKGIVRKIMPYGAFVDIGGIEGLLHISDISWQKIKKVEDVLSVG 511
Score = 53.5 bits (127), Expect = 7e-06
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Frame = +2
Query: 116 KGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTG--EELLE--KEIPLKFVEVDEEQSRL 283
KG + G ++ G++G + S IS + E++L +EI +K D E ++L
Sbjct: 469 KGIVRKIMPYGAFVDIGGIEGLLHISDISWQKIKKVEDVLSVGQEIEVKLQSFDAESNKL 528
Query: 284 ILSHRKAVADS-----QGQLGIGSVVTGSVQSLKPYGAFIDIG-GISGLLHVSQISHDRI 445
LS KA++ S + L +G V+ G V L YGAF+ + I GLLH+SQI+ R
Sbjct: 529 SLS-LKALSKSPWDVAEETLHVGDVINGKVVRLVAYGAFVAVNDDIQGLLHISQITKQRN 587
Query: 446 TDISTVLQPG 475
+ L G
Sbjct: 588 AKVEDYLNRG 597
[217][TOP]
>UniRef100_C2AWN0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal
protein S1P n=1 Tax=Veillonella parvula DSM 2008
RepID=C2AWN0_9FIRM
Length = 632
Score = 98.6 bits (244), Expect = 2e-19
Identities = 55/168 (32%), Positives = 93/168 (55%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
VI+ + D+ ++LS+ + W+ + Q +D + K ++A G+V V+ L+GF
Sbjct: 344 VIMNHIKEDNPIYLSMTRLAKDEDWQYVIEAQEKDEAIVCKGIDAIPAGLVVTVKSLRGF 403
Query: 182 VPFSQ--ISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAV--------ADSQGQLG 331
+P SQ + + + L+ E K +E+DE+++RL+LS R + A++ +
Sbjct: 404 IPLSQGDVHFVKSLDNLVGTEFEAKVLEIDEKKNRLVLSRRAVLEVERQAKLAEALKNIN 463
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+G G V+ + PYGAF+DIGGI GLLH+S IS +I + VL G
Sbjct: 464 VGENYKGIVRKIMPYGAFVDIGGIEGLLHISDISWQKIKKVEDVLSVG 511
Score = 53.5 bits (127), Expect = 7e-06
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Frame = +2
Query: 116 KGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTG--EELLE--KEIPLKFVEVDEEQSRL 283
KG + G ++ G++G + S IS + E++L +EI +K D E ++L
Sbjct: 469 KGIVRKIMPYGAFVDIGGIEGLLHISDISWQKIKKVEDVLSVGQEIEVKLQSFDAESNKL 528
Query: 284 ILSHRKAVADS-----QGQLGIGSVVTGSVQSLKPYGAFIDIG-GISGLLHVSQISHDRI 445
LS KA++ S + L +G V+ G V L YGAF+ + I GLLH+SQI+ R
Sbjct: 529 SLS-LKALSKSPWDVAEETLHVGDVINGKVVRLVAYGAFVAVNDDIQGLLHISQITKQRN 587
Query: 446 TDISTVLQPG 475
+ L G
Sbjct: 588 AKVEDYLNRG 597
[218][TOP]
>UniRef100_C0UWP5 SSU ribosomal protein S1P n=1 Tax=Thermobaculum terrenum ATCC
BAA-798 RepID=C0UWP5_9BACT
Length = 431
Score = 98.6 bits (244), Expect = 2e-19
Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 17/175 (9%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
V+ +++ + LS+ + W +Q +V K+V NKGG++ ++ GL+GF
Sbjct: 132 VLNASEDNEGRIVLSVDRARAERLWRELQQKLETGEIVDCKVVGYNKGGLLVDLGGLRGF 191
Query: 182 VPFSQIS---------TKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG---- 322
+P SQIS +S L+ + + K +EV+ +++RLILS R A + +
Sbjct: 192 IPSSQISFLVSSNDADRQSELANLVGRTLQAKVIEVNRKRNRLILSERIATQERKETSKE 251
Query: 323 ----QLGIGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+L G +V G V SL +GAF+DIGG GL+H+S+IS RI S VL+PG
Sbjct: 252 RLIEELREGQIVKGRVTSLADFGAFVDIGGADGLIHLSEISWGRINHPSEVLKPG 306
[219][TOP]
>UniRef100_B2KT97 S1 ribosomal protein n=1 Tax=Mycobacterium abscessus
RepID=B2KT97_MYCAB
Length = 481
Score = 98.6 bits (244), Expect = 2e-19
Identities = 54/168 (32%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW +L+ +D VKG ++ KGG++ ++ GL+GF
Sbjct: 89 LVLTKEDKEGRLILSKKRAQYERAWGTIEELKEKDEAVKGTVIEVVKGGLILDI-GLRGF 147
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLG 331
+P S + + + + KEI K +E+D ++ ++LS R + +Q QL
Sbjct: 148 LPASLVEMRRVRDLQPYIGKEIEAKIIELDRNRNNVVLSRRAWLEQTQSEVRSEFLNQLT 207
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G++ G V S+ +GAF+D+GG+ GL+HVS++S I S V+Q G
Sbjct: 208 KGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVG 255
[220][TOP]
>UniRef100_A5ZTQ9 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC
29174 RepID=A5ZTQ9_9FIRM
Length = 301
Score = 98.6 bits (244), Expect = 2e-19
Identities = 66/172 (38%), Positives = 103/172 (59%), Gaps = 15/172 (8%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAE----DAVVKGKIVNANKGGVVAEVEGL 172
++ +++ + LS LAW++ ++L+ D VVKG I NA GV+A VEG+
Sbjct: 76 VVRKDDGQGNILLSRVEAVDVLAWDKLKELKESGEVLDVVVKG-ITNA---GVIAYVEGV 131
Query: 173 KGFVPFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHR---KAVADSQ-----G 322
+GF+P S+++ EE L K I ++ ++VD+E +LILS + +A A+ +
Sbjct: 132 RGFIPASKLALNYVEDTEEYLNKPIQVQVLDVDKESKKLILSAKEILRAKAEEERKNKVS 191
Query: 323 QLGIGSVVTGSVQSLKPYGAFIDIG-GISGLLHVSQISHDRITDISTVLQPG 475
L IG V G+V+SL+PYGAF+++G G+SGL+H+SQI RI S VL G
Sbjct: 192 NLEIGLVTEGTVESLQPYGAFVNLGNGLSGLVHISQICEKRIKKPSEVLAVG 243
[221][TOP]
>UniRef100_C7HUB3 Putative uncharacterized protein n=1 Tax=Anaerococcus vaginalis
ATCC 51170 RepID=C7HUB3_9FIRM
Length = 691
Score = 98.2 bits (243), Expect = 3e-19
Identities = 56/163 (34%), Positives = 89/163 (54%), Gaps = 6/163 (3%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
+I ++ + + LS + ++ W+ R+ D V+G + ANKGG+ A V G+ GFV
Sbjct: 350 VIKLDDGEGNVSLSTRRVEGMKNWKNLREAYENDQTVEGDVTGANKGGLTARVMGINGFV 409
Query: 185 PFSQIST--KSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVA----DSQGQLGIGSVV 346
P SQI+ ++ + + LK + +DE ++RL+LS + V + +L G V+
Sbjct: 410 PASQIAPYFVKNFKKFVGEHWDLKIISIDERKNRLVLSRKDIVEEKLDEQWDELEEGQVI 469
Query: 347 TGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
TG V L +GAFI+IG + GLLHVS I+ R+ VL G
Sbjct: 470 TGKVARLTDFGAFIEIGSLDGLLHVSDIAWTRVEHPKDVLNIG 512
Score = 64.7 bits (156), Expect = 3e-09
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 9/166 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
II +E + L LS K I E+ +L+ E V+ GK+ G E+ L G +
Sbjct: 434 IISIDERKNRLVLSRKDIVEEKLDEQWDELE-EGQVITGKVARLTDFGAFIEIGSLDGLL 492
Query: 185 PFSQISTKSTGEEL----LEKEIPLKFVEVDEEQSRLILSHR----KAVADSQGQLGIGS 340
S I+ + +I +K +++++E++R+ L + K A+ + +G
Sbjct: 493 HVSDIAWTRVEHPKDVLNIGDDIEVKILKLNKEKNRISLGRKQLLEKPFAEFTNEHEVGD 552
Query: 341 VVTGSVQSLKPYGAFIDIG-GISGLLHVSQISHDRITDISTVLQPG 475
V+TG V +L +GAF+++ G+ GL+HVS+IS D + S L G
Sbjct: 553 VITGKVVNLLDFGAFVEVSEGVEGLIHVSEISWDHVEKPSDELNVG 598
[222][TOP]
>UniRef100_C7G8Z2 Putative SSU ribosomal protein S1P n=1 Tax=Roseburia intestinalis
L1-82 RepID=C7G8Z2_9FIRM
Length = 303
Score = 98.2 bits (243), Expect = 3e-19
Identities = 56/168 (33%), Positives = 98/168 (58%), Gaps = 11/168 (6%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++ ++ + LS K LAW++ +Q+ ++ VK +I + GVV +EG++ F+
Sbjct: 75 VVQTDDGAGNIVLSKKEANDILAWDKLKQMMEDETTVKVRIKESVPSGVVTYLEGIRAFI 134
Query: 185 PFSQISTK--STGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQ--------LGI 334
P SQI+ + + KEI ++ + VD E+ +L+LS + +++ + +
Sbjct: 135 PASQITLDYVEDTDAWIGKEIEVRVITVDAEKEKLVLSGKAVAREAEAEERNHKISMIVP 194
Query: 335 GSVVTGSVQSLKPYGAFIDIG-GISGLLHVSQISHDRITDISTVLQPG 475
G+V+ G+V+SL PYGAFI++G G+SGL+H+SQI RI S VL+ G
Sbjct: 195 GTVMEGTVESLMPYGAFINLGNGLSGLVHISQICERRIKKPSEVLKEG 242
[223][TOP]
>UniRef100_B5VV11 RNA binding S1 domain protein n=1 Tax=Arthrospira maxima CS-328
RepID=B5VV11_SPIMA
Length = 294
Score = 98.2 bits (243), Expect = 3e-19
Identities = 47/159 (29%), Positives = 90/159 (56%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+II + SD + LSL+ +Q AW+ ++ ++ + N+GGV + + L+GF
Sbjct: 81 LIIRDQNSDGQVLLSLRKLQVEKAWDHLSEISENSESLQVVVTGVNRGGVTVDADCLRGF 140
Query: 182 VPFSQISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVAD-SQGQLGIGSVVTGSV 358
+P S + + E L+ + I + +E + ++ +L+LS R A S QL +G +V G+V
Sbjct: 141 IPRSHLLVRDNLEALVGETITVTVLEFNRDREKLVLSQRMASQSVSFSQLQVGQLVEGTV 200
Query: 359 QSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
S+KP+G FI++ G++GL+H+ ++S + + + G
Sbjct: 201 GSIKPFGVFIELEGVTGLIHIKEVSQKYVGSLPDIFTIG 239
[224][TOP]
>UniRef100_A6NUQ8 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus
ATCC 29799 RepID=A6NUQ8_9BACE
Length = 649
Score = 98.2 bits (243), Expect = 3e-19
Identities = 53/163 (32%), Positives = 92/163 (56%), Gaps = 10/163 (6%)
Frame = +2
Query: 17 NESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQ 196
N+ + + LS K + +W+ Q + + V+G + NKGG+V ++G++ FVP SQ
Sbjct: 362 NDQEGVVTLSKKRLDTVKSWDDIEQAREDHTTVEGVVTEENKGGIVVSIKGVRVFVPASQ 421
Query: 197 --ISTKSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLGIGSVV 346
+ ++ ELL+K + L+ EV+ + R++ S R A+ + + G
Sbjct: 422 TGLPRETPMSELLKKHVRLRITEVNRARRRVVGSIRAVTAEERAAKAAEVWENIEEGKKY 481
Query: 347 TGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
TG+V+SL YGAF+DIGG+ G++H+S++S RI S V++ G
Sbjct: 482 TGTVKSLTSYGAFVDIGGVDGMVHISELSWSRIKHPSEVVKVG 524
[225][TOP]
>UniRef100_UPI0001B458AB 30S ribosomal protein S1 n=1 Tax=Mycobacterium intracellulare ATCC
13950 RepID=UPI0001B458AB
Length = 479
Score = 97.8 bits (242), Expect = 3e-19
Identities = 54/168 (32%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW L+ +D VKG ++ KGG++ ++ GL+GF
Sbjct: 89 LVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKDEAVKGTVIEVVKGGLILDI-GLRGF 147
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLG 331
+P S + + + + KEI K +E+D+ ++ ++LS R + +Q QL
Sbjct: 148 LPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLNQLQ 207
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G++ G V S+ +GAF+D+GG+ GL+HVS++S I S V+Q G
Sbjct: 208 KGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVG 255
Score = 53.1 bits (126), Expect = 9e-06
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 9/142 (6%)
Frame = +2
Query: 47 LKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE-- 220
L+ Q + E QLQ + A+ KG + + G ++ G+ G V S++S K
Sbjct: 191 LEQTQSEVRSEFLNQLQ-KGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPS 249
Query: 221 ELLE--KEIPLKFVEVDEEQSRLILSHRKAVADSQGQLG----IGSVVTGSVQSLKPYGA 382
E+++ E+ ++ ++VD ++ R+ LS + D IG +V G V L P+GA
Sbjct: 250 EVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTKLVPFGA 309
Query: 383 FIDI-GGISGLLHVSQISHDRI 445
F+ + GI GL+H+S+++ +
Sbjct: 310 FVRVEEGIEGLVHISELAERHV 331
[226][TOP]
>UniRef100_UPI0001AF41F3 30S ribosomal protein S1 n=1 Tax=Mycobacterium kansasii ATCC 12478
RepID=UPI0001AF41F3
Length = 481
Score = 97.8 bits (242), Expect = 3e-19
Identities = 54/168 (32%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW L+ +D VKG ++ KGG++ ++ GL+GF
Sbjct: 89 LVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKDEAVKGTVIEVVKGGLILDI-GLRGF 147
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLG 331
+P S + + + + KEI K +E+D+ ++ ++LS R + +Q QL
Sbjct: 148 LPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLNQLQ 207
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G++ G V S+ +GAF+D+GG+ GL+HVS++S I S V+Q G
Sbjct: 208 KGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVG 255
[227][TOP]
>UniRef100_A2RLX0 30S ribosomal protein S1 n=3 Tax=Lactococcus lactis
RepID=A2RLX0_LACLM
Length = 408
Score = 97.8 bits (242), Expect = 3e-19
Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Frame = +2
Query: 5 IIG-ENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
I+G E E + LSLK ++ AW + + E +V K+ KGG+ + G++GF
Sbjct: 76 IVGKEAEGANVYLLSLKRLEARKAWTQLEGKEGE--IVTVKVTKDVKGGLSVDYNGVRGF 133
Query: 182 VPFSQIST---KSTGEELLEKEIPLKFVEVDEEQSRLILSHRKAVA--------DSQGQL 328
+P S I T K T ++ + +EI K +EV+ ++R ILS R V ++ QL
Sbjct: 134 IPASMIDTYFVKDT-KKFVGEEIEAKIIEVNASENRFILSRRAVVEAEAIEMRKEAFAQL 192
Query: 329 GIGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G +V G+V + +GAF+D+GGI GL+HVS++SH RI S ++PG
Sbjct: 193 QEGDIVEGTVSRVTNFGAFVDLGGIDGLVHVSELSHSRIKRPSDAVKPG 241
Score = 62.4 bits (150), Expect = 2e-08
Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQA---EDAVVKGKIVNANKGGVVAEVEGLK 175
II N S++ LS +++ A E ++ A E +V+G + G ++ G+
Sbjct: 159 IIEVNASENRFILSRRAVVEAEAIEMRKEAFAQLQEGDIVEGTVSRVTNFGAFVDLGGID 218
Query: 176 GFVPFSQIS---TKSTGEELLEKEIP-LKFVEVDEEQSRLILSHRKAVADSQGQLG---- 331
G V S++S K + + ++ +K +++D E RL LS + Q+
Sbjct: 219 GLVHVSELSHSRIKRPSDAVKPGDVVNVKILKLDPEAGRLSLSLKATQPGPWEQVEEKAP 278
Query: 332 IGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDRITDISTVLQPG 475
+GS V G+V+ L +GAF+++ G+ GL+HVSQIS +R+ + VL+ G
Sbjct: 279 VGSTVEGTVKRLTDFGAFVELYPGVEGLVHVSQISWERVENPKDVLKVG 327
[228][TOP]
>UniRef100_A0QHE8 30S ribosomal protein S1 n=2 Tax=Mycobacterium avium
RepID=A0QHE8_MYCA1
Length = 480
Score = 97.8 bits (242), Expect = 3e-19
Identities = 54/168 (32%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW L+ +D VKG ++ KGG++ ++ GL+GF
Sbjct: 89 LVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKDEAVKGTVIEVVKGGLILDI-GLRGF 147
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLG 331
+P S + + + + KEI K +E+D+ ++ ++LS R + +Q QL
Sbjct: 148 LPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLNQLQ 207
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G++ G V S+ +GAF+D+GG+ GL+HVS++S I S V+Q G
Sbjct: 208 KGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVG 255
Score = 53.1 bits (126), Expect = 9e-06
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 9/142 (6%)
Frame = +2
Query: 47 LKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE-- 220
L+ Q + E QLQ + A+ KG + + G ++ G+ G V S++S K
Sbjct: 191 LEQTQSEVRSEFLNQLQ-KGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPS 249
Query: 221 ELLE--KEIPLKFVEVDEEQSRLILSHRKAVADSQGQLG----IGSVVTGSVQSLKPYGA 382
E+++ E+ ++ ++VD ++ R+ LS + D IG +V G V L P+GA
Sbjct: 250 EVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTKLVPFGA 309
Query: 383 FIDI-GGISGLLHVSQISHDRI 445
F+ + GI GL+H+S+++ +
Sbjct: 310 FVRVEEGIEGLVHISELAERHV 331
[229][TOP]
>UniRef100_A0PP44 Ribosomal protein S1 RpsA n=2 Tax=Mycobacterium RepID=A0PP44_MYCUA
Length = 481
Score = 97.8 bits (242), Expect = 3e-19
Identities = 54/168 (32%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW L+ +D VKG ++ KGG++ ++ GL+GF
Sbjct: 89 LVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKDEAVKGTVIEVVKGGLILDI-GLRGF 147
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLG 331
+P S + + + + KEI K +E+D+ ++ ++LS R + +Q QL
Sbjct: 148 LPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLNQLQ 207
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G++ G V S+ +GAF+D+GG+ GL+HVS++S I S V+Q G
Sbjct: 208 KGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVG 255
[230][TOP]
>UniRef100_B2XT45 30S ribosomal protein S1 n=2 Tax=Heterosigma akashiwo
RepID=B2XT45_HETA2
Length = 269
Score = 97.8 bits (242), Expect = 3e-19
Identities = 52/149 (34%), Positives = 90/149 (60%), Gaps = 1/149 (0%)
Frame = +2
Query: 32 TLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKS 211
TL +SLK ++ + W+R ++L ED ++ G++ + K G + + GLKGFV S +
Sbjct: 91 TLIISLKQLKSIITWQRLKELIREDLILSGQVKKSTKQGKLIILNGLKGFVLNSHLPKYY 150
Query: 212 TGEELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQ-LGIGSVVTGSVQSLKPYGAFI 388
++L + +PLKF+E+ E +++++LS + A +Q L V+ G + +K YG F+
Sbjct: 151 RRKQLTKLHLPLKFLELSEGKNKILLSCKLAHFKNQTNFLKPQQVIMGCITDIKSYGLFV 210
Query: 389 DIGGISGLLHVSQISHDRITDISTVLQPG 475
+I G+ GLLH+S+IS RI ++S Q G
Sbjct: 211 NIYGLKGLLHISEISSQRIDNLSKRFQKG 239
[231][TOP]
>UniRef100_Q9KCD6 30S ribosomal protein S1 n=1 Tax=Bacillus halodurans
RepID=Q9KCD6_BACHD
Length = 383
Score = 97.4 bits (241), Expect = 4e-19
Identities = 56/161 (34%), Positives = 94/161 (58%), Gaps = 11/161 (6%)
Frame = +2
Query: 26 DDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQIST 205
DD L LS +++Q AWE + V++ ++ + KGG+V ++ G++GF+P S +
Sbjct: 77 DDELILSKRAVQAEKAWETLQAALDSGEVIEAEVADVVKGGLVVDL-GVRGFIPASLVER 135
Query: 206 KSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ---------GQLGIGSVVTG 352
+ + + + LK VE+D+E ++LILS R AV D + L G VV G
Sbjct: 136 HYVEDFSDYKGRTLRLKVVELDKEANKLILSQR-AVLDEEVEAKKKEVLASLQPGDVVEG 194
Query: 353 SVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+VQ L +GAF+D+GG+ GL+H+SQ++H R+ + V++ G
Sbjct: 195 TVQRLTDFGAFVDVGGVDGLVHISQLAHHRVETPAEVVKEG 235
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/131 (29%), Positives = 70/131 (53%), Gaps = 9/131 (6%)
Frame = +2
Query: 110 VVKGKIVNANKGGVVAEVEGLKGFVPFSQIS---TKSTGEELLEKE-IPLKFVEVDEEQS 277
VV+G + G +V G+ G V SQ++ ++ E + E + + +K + VD +
Sbjct: 191 VVEGTVQRLTDFGAFVDVGGVDGLVHISQLAHHRVETPAEVVKEGDAVKVKVLSVDPDSE 250
Query: 278 RLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDIG-GISGLLHVSQISHDR 442
R+ LS ++ + +G + G V+ G+V+ L +GAF+++ G+ GL+H+SQI++
Sbjct: 251 RVSLSIKETLPGPWEQVEGTIQPGDVIEGTVKRLVSFGAFVEVAPGVEGLVHISQIANRH 310
Query: 443 ITDISTVLQPG 475
I VL G
Sbjct: 311 IGTPGEVLSEG 321
[232][TOP]
>UniRef100_Q5YYJ8 Putative ribosomal protein S1 n=1 Tax=Nocardia farcinica
RepID=Q5YYJ8_NOCFA
Length = 487
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/168 (32%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW +L+ +D VKG ++ KGG++ ++ GL+GF
Sbjct: 88 LVLTKEDKEGRLILSKKRAQYERAWGTIEELKEKDEAVKGTVIEVVKGGLILDI-GLRGF 146
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLG 331
+P S + + + + KEI K +E+D+ ++ ++LS R + +Q QL
Sbjct: 147 LPASLVEMRRVRDLQPYVGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLHQLQ 206
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G V G V S+ +GAF+D+GG+ GL+HVS++S I S V++ G
Sbjct: 207 KGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVEVG 254
Score = 54.7 bits (130), Expect = 3e-06
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 9/142 (6%)
Frame = +2
Query: 47 LKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE-- 220
L+ Q + E QLQ + V KG + + G ++ G+ G V S++S K
Sbjct: 190 LEQTQSEVRSEFLHQLQ-KGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPS 248
Query: 221 ELLE--KEIPLKFVEVDEEQSRLILSHRKAVADSQGQLG----IGSVVTGSVQSLKPYGA 382
E++E E+ ++ ++VD ++ R+ LS + D Q IG +V G V L P+GA
Sbjct: 249 EVVEVGNEVTVEVLDVDLDRERVSLSLKATQEDPWRQFARTHAIGQIVPGKVTKLVPFGA 308
Query: 383 FIDI-GGISGLLHVSQISHDRI 445
F+ + GI GL+H+S+++ +
Sbjct: 309 FVRVEEGIEGLVHISELAERHV 330
[233][TOP]
>UniRef100_Q0SI29 30S ribosomal protein S1 n=1 Tax=Rhodococcus jostii RHA1
RepID=Q0SI29_RHOSR
Length = 494
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/168 (32%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW +L+ +D VKG ++ KGG++ ++ GL+GF
Sbjct: 89 LVLTKEDKEGRLILSKKRAQYERAWGTIEELKEKDEAVKGTVIEVVKGGLILDI-GLRGF 147
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLG 331
+P S + + + + KEI K +E+D+ ++ ++LS R + +Q QL
Sbjct: 148 LPASLVEMRRVRDLQPYVGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLHQLQ 207
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G V G V S+ +GAF+D+GG+ GL+HVS++S I S V++ G
Sbjct: 208 KGQVRKGIVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVEVG 255
Score = 53.9 bits (128), Expect = 5e-06
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 9/142 (6%)
Frame = +2
Query: 47 LKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE-- 220
L+ Q + E QLQ + V KG + + G ++ G+ G V S++S K
Sbjct: 191 LEQTQSEVRSEFLHQLQ-KGQVRKGIVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPS 249
Query: 221 ELLE--KEIPLKFVEVDEEQSRLILSHRKAVADSQGQLG----IGSVVTGSVQSLKPYGA 382
E++E E+ ++ ++VD ++ R+ LS + D Q IG +V G V L P+GA
Sbjct: 250 EVVEVGTEVTVEVLDVDLDRERVSLSLKATQEDPWRQFARTHAIGQIVPGKVTKLVPFGA 309
Query: 383 FIDI-GGISGLLHVSQISHDRI 445
F+ + GI GL+H+S+++ +
Sbjct: 310 FVRVEEGIEGLVHISELAERHV 331
[234][TOP]
>UniRef100_C4L6M2 RNA binding S1 domain protein n=1 Tax=Exiguobacterium sp. AT1b
RepID=C4L6M2_EXISA
Length = 382
Score = 97.4 bits (241), Expect = 4e-19
Identities = 52/161 (32%), Positives = 91/161 (56%), Gaps = 10/161 (6%)
Frame = +2
Query: 23 SDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQIS 202
+D+ + +S K + AW+R + V + + + KGG+V ++ G++GF+P S +
Sbjct: 74 TDEEVVVSKKDVDAEAAWDRIVEKFESGEVFEVMVKDKVKGGLVVDI-GIRGFIPASLVE 132
Query: 203 TKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLGIGSVVTG 352
+ + L I +K VE+D E++R+ILSH+ V + L +G V+ G
Sbjct: 133 SHFVEDFSSYLNNPITVKVVEIDREKNRVILSHKAVVEEEMSAKKSETLESLEVGQVIEG 192
Query: 353 SVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
+VQ L +GAF+DIGG+ GL+H+S+++H R+ S V+ G
Sbjct: 193 TVQRLTDFGAFVDIGGVDGLVHISEMAHSRVEKPSDVVTEG 233
[235][TOP]
>UniRef100_C1AT24 30S ribosomal protein S1 n=1 Tax=Rhodococcus opacus B4
RepID=C1AT24_RHOOB
Length = 494
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/168 (32%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW +L+ +D VKG ++ KGG++ ++ GL+GF
Sbjct: 89 LVLTKEDKEGRLILSKKRAQYERAWGTIEELKEKDEAVKGTVIEVVKGGLILDI-GLRGF 147
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLG 331
+P S + + + + KEI K +E+D+ ++ ++LS R + +Q QL
Sbjct: 148 LPASLVEMRRVRDLQPYVGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLHQLQ 207
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G V G V S+ +GAF+D+GG+ GL+HVS++S I S V++ G
Sbjct: 208 KGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVEVG 255
Score = 54.3 bits (129), Expect = 4e-06
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 9/142 (6%)
Frame = +2
Query: 47 LKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE-- 220
L+ Q + E QLQ + V KG + + G ++ G+ G V S++S K
Sbjct: 191 LEQTQSEVRSEFLHQLQ-KGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPS 249
Query: 221 ELLE--KEIPLKFVEVDEEQSRLILSHRKAVADSQGQLG----IGSVVTGSVQSLKPYGA 382
E++E E+ ++ ++VD ++ R+ LS + D Q IG +V G V L P+GA
Sbjct: 250 EVVEVGTEVTVEVLDVDLDRERVSLSLKATQEDPWRQFARTHAIGQIVPGKVTKLVPFGA 309
Query: 383 FIDI-GGISGLLHVSQISHDRI 445
F+ + GI GL+H+S+++ +
Sbjct: 310 FVRVEEGIEGLVHISELAERHV 331
[236][TOP]
>UniRef100_C1A085 Probable 30S ribosomal protein S1 n=1 Tax=Rhodococcus erythropolis
PR4 RepID=C1A085_RHOE4
Length = 495
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/168 (32%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW +L+ +D VKG ++ KGG++ ++ GL+GF
Sbjct: 89 LVLTKEDKEGRLILSKKRAQYERAWGTIEELKEKDEAVKGTVIEVVKGGLILDI-GLRGF 147
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLG 331
+P S + + + + KEI K +E+D+ ++ ++LS R + +Q QL
Sbjct: 148 LPASLVEMRRVRDLQPYVGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLHQLQ 207
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G V G V S+ +GAF+D+GG+ GL+HVS++S I S V++ G
Sbjct: 208 KGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVEVG 255
Score = 54.3 bits (129), Expect = 4e-06
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 9/142 (6%)
Frame = +2
Query: 47 LKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE-- 220
L+ Q + E QLQ + V KG + + G ++ G+ G V S++S K
Sbjct: 191 LEQTQSEVRSEFLHQLQ-KGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPS 249
Query: 221 ELLE--KEIPLKFVEVDEEQSRLILSHRKAVADSQGQLG----IGSVVTGSVQSLKPYGA 382
E++E E+ ++ ++VD ++ R+ LS + D Q IG +V G V L P+GA
Sbjct: 250 EVVEVGTEVTVEVLDVDLDRERVSLSLKATQEDPWRQFARTHAIGQIVPGKVTKLVPFGA 309
Query: 383 FIDI-GGISGLLHVSQISHDRI 445
F+ + GI GL+H+S+++ +
Sbjct: 310 FVRVEEGIEGLVHISELAERHV 331
[237][TOP]
>UniRef100_C3JQM6 30S ribosomal protein S1 n=1 Tax=Rhodococcus erythropolis SK121
RepID=C3JQM6_RHOER
Length = 495
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/168 (32%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW +L+ +D VKG ++ KGG++ ++ GL+GF
Sbjct: 89 LVLTKEDKEGRLILSKKRAQYERAWGTIEELKEKDEAVKGTVIEVVKGGLILDI-GLRGF 147
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLG 331
+P S + + + + KEI K +E+D+ ++ ++LS R + +Q QL
Sbjct: 148 LPASLVEMRRVRDLQPYVGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLHQLQ 207
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G V G V S+ +GAF+D+GG+ GL+HVS++S I S V++ G
Sbjct: 208 KGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVEVG 255
Score = 54.3 bits (129), Expect = 4e-06
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 9/142 (6%)
Frame = +2
Query: 47 LKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE-- 220
L+ Q + E QLQ + V KG + + G ++ G+ G V S++S K
Sbjct: 191 LEQTQSEVRSEFLHQLQ-KGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPS 249
Query: 221 ELLE--KEIPLKFVEVDEEQSRLILSHRKAVADSQGQLG----IGSVVTGSVQSLKPYGA 382
E++E E+ ++ ++VD ++ R+ LS + D Q IG +V G V L P+GA
Sbjct: 250 EVVEVGTEVTVEVLDVDLDRERVSLSLKATQEDPWRQFARTHAIGQIVPGKVTKLVPFGA 309
Query: 383 FIDI-GGISGLLHVSQISHDRI 445
F+ + GI GL+H+S+++ +
Sbjct: 310 FVRVEEGIEGLVHISELAERHV 331
[238][TOP]
>UniRef100_A8RLK3 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
BAA-613 RepID=A8RLK3_9CLOT
Length = 258
Score = 97.4 bits (241), Expect = 4e-19
Identities = 60/148 (40%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Frame = +2
Query: 65 GLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTG--EELLEKE 238
G W + Q+ + VVK KI A KGGVV +E ++ F+P SQ+ST+ E+ K
Sbjct: 55 GAKWAQFAQMMEDRTVVKVKIAEAVKGGVVTSLEEVRAFIPASQLSTEYVEKLEDWQGKY 114
Query: 239 IPLKFVEVDEEQSRLILSHRKAVADSQ--------GQLGIGSVVTGSVQSLKPYGAFIDI 394
+ + VD E+ RL+LS R+ + + Q G VV G+V S+KPYGAFI +
Sbjct: 115 VEAVIITVDPEKKRLVLSGREVEKEKKEAQKKERMAQFKAGDVVEGTVDSIKPYGAFIKL 174
Query: 395 -GGISGLLHVSQISHDRITDISTVLQPG 475
G+ GLLH+SQIS RI S VL G
Sbjct: 175 DDGVDGLLHISQISTQRIKHPSAVLTEG 202
[239][TOP]
>UniRef100_UPI00018A0392 hypothetical protein BIFGAL_00360 n=1 Tax=Bifidobacterium gallicum
DSM 20093 RepID=UPI00018A0392
Length = 495
Score = 97.1 bits (240), Expect = 6e-19
Identities = 51/168 (30%), Positives = 99/168 (58%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW +++ +D VV+G ++ A KGG++ ++ GL+GF
Sbjct: 89 LVVTKEDKEGRLILSKKRAQYERAWGDIEKIKEDDGVVEGTVIEAVKGGLIVDI-GLRGF 147
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLG 331
+P S + + + + ++I K +E+D+ ++ ++LS R+ + ++Q QL
Sbjct: 148 LPASLVEMRRVRDLSPYIGQKIKAKILELDKNRNNVVLSRRQYLEETQSEVRETFLSQLK 207
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G + G V S+ +GAF+D+GG+ GL+HVS++S I S V++ G
Sbjct: 208 KGQIREGVVSSIVNFGAFVDLGGVDGLIHVSELSWKHIDHPSEVVKVG 255
[240][TOP]
>UniRef100_A6BHV7 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM
13814 RepID=A6BHV7_9FIRM
Length = 269
Score = 97.1 bits (240), Expect = 6e-19
Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 11/145 (7%)
Frame = +2
Query: 74 WERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTG--EELLEKEIPL 247
W + + V+ K+ GG +A VEGL+GF+P S++S E L K+I +
Sbjct: 69 WNVVKSYMEKGTVLPVKVEGIVNGGAIAMVEGLRGFIPASRLSLSYIEDLETYLLKDIEV 128
Query: 248 KFVEVDEEQSRLILSHR-----KAVADSQGQLG---IGSVVTGSVQSLKPYGAFIDIG-G 400
K ++VDE +RL+LS R KA + + ++ +GS+VTG+V+SL+ YGAF+D+G G
Sbjct: 129 KVIDVDEANNRLVLSAREILQEKARKEREAKIAAVKVGSIVTGTVESLQNYGAFVDLGDG 188
Query: 401 ISGLLHVSQISHDRITDISTVLQPG 475
+SGL+H+SQIS RI + VL G
Sbjct: 189 LSGLVHISQISLKRIKSPADVLNVG 213
[241][TOP]
>UniRef100_P46836 30S ribosomal protein S1 n=2 Tax=Mycobacterium leprae
RepID=RS1_MYCLE
Length = 481
Score = 97.1 bits (240), Expect = 6e-19
Identities = 54/168 (32%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW L+ +D VKG ++ KGG++ ++ GL+GF
Sbjct: 89 LVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKDEAVKGIVIEVVKGGLILDI-GLRGF 147
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLG 331
+P S + + + + KEI K +E+D+ ++ ++LS R + +Q QL
Sbjct: 148 LPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLNQLQ 207
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G++ G V S+ +GAF+D+GG+ GL+HVS++S I S V+Q G
Sbjct: 208 KGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVG 255
Score = 53.5 bits (127), Expect = 7e-06
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 9/142 (6%)
Frame = +2
Query: 47 LKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE-- 220
L+ Q + E QLQ + A+ KG + + G ++ G+ G V S++S K
Sbjct: 191 LEQTQSEVRSEFLNQLQ-KGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPS 249
Query: 221 ELLE--KEIPLKFVEVDEEQSRLILSHRKAVADSQGQLG----IGSVVTGSVQSLKPYGA 382
E+++ E+ ++ ++VD ++ R+ LS + D IG +V G V L P+GA
Sbjct: 250 EVVQVGNEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTKLVPFGA 309
Query: 383 FIDI-GGISGLLHVSQISHDRI 445
F+ + GI GL+H+S+++ +
Sbjct: 310 FVRVEEGIEGLVHISELAERHV 331
[242][TOP]
>UniRef100_B2A4N7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Natranaerobius
thermophilus JW/NM-WN-LF RepID=B2A4N7_NATTJ
Length = 705
Score = 96.7 bits (239), Expect = 7e-19
Identities = 53/167 (31%), Positives = 91/167 (54%), Gaps = 10/167 (5%)
Frame = +2
Query: 5 IIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFV 184
++ ++ + L LS K WE+ QL D +K ++ KGG+V ++ L+GF+
Sbjct: 380 VVKVDDEEGQLILSKKWADKDKQWEQLEQLMENDEEIKAQVTEEVKGGLVVDLGQLQGFI 439
Query: 185 PFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQ--------LGI 334
P S + + + + +E+ LK +E+D +++++LS + + Q + +
Sbjct: 440 PASHVDIHYVPDLSKYVGEELRLKPIELDRSRNKIVLSQKNILEQEQEEKKNKTMETITE 499
Query: 335 GSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G +V G+V+ L +GAFIDIGGI GL H+SQISH RI + L+ G
Sbjct: 500 GDIVDGTVKRLTDFGAFIDIGGIDGLCHISQISHSRIDHPESELETG 546
Score = 56.2 bits (134), Expect = 1e-06
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 9/134 (6%)
Frame = +2
Query: 101 EDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGEELLEKE----IPLKFVEVDE 268
E +V G + G ++ G+ G SQIS E E + +K + +D
Sbjct: 499 EGDIVDGTVKRLTDFGAFIDIGGIDGLCHISQISHSRIDHPESELETGENVKVKVLSLDP 558
Query: 269 EQSRLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQIS 433
E R+ LS ++A D Q G +V G V +GAFI+I G+ GL H+SQ+S
Sbjct: 559 ENERISLSIKEAQPDPFETFMKQYKSGDIVQGKVVRTVNFGAFIEITPGVEGLCHISQLS 618
Query: 434 HDRITDISTVLQPG 475
D + V+ G
Sbjct: 619 DDHVAKTQDVVNEG 632
[243][TOP]
>UniRef100_A8L4N4 RNA binding S1 domain protein n=1 Tax=Frankia sp. EAN1pec
RepID=A8L4N4_FRASN
Length = 493
Score = 96.7 bits (239), Expect = 7e-19
Identities = 52/168 (30%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW +L+ ED VV G ++ KGG++ ++ GL+GF
Sbjct: 102 LVLQKEDKEGRLILSKKRAQYERAWGTIEKLKEEDGVVTGTVIEVVKGGLILDI-GLRGF 160
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLG 331
+P S + + + + +E+ K +E+D+ ++ ++LS R + +Q QL
Sbjct: 161 LPASLVEMRRVRDLQPYVGRELEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLAQLA 220
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G + G V S+ +GAF+D+GG+ GL+HVS++S I S V++ G
Sbjct: 221 KGQIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVEVG 268
Score = 55.1 bits (131), Expect = 2e-06
Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 9/135 (6%)
Frame = +2
Query: 98 AEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGE--ELLE--KEIPLKFVEVD 265
A+ + KG + + G ++ G+ G V S++S K E++E +E+ ++ ++VD
Sbjct: 220 AKGQIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVEVGQEVTVEVLDVD 279
Query: 266 EEQSRLILSHRKAVADSQGQLG----IGSVVTGSVQSLKPYGAFIDIG-GISGLLHVSQI 430
++ R+ LS + D Q IG VV G V L P+GAF+ + GI GL+H+S++
Sbjct: 280 LDRERVSLSLKATQEDPWRQFARTHAIGQVVPGRVTKLVPFGAFVRVDEGIEGLVHISEL 339
Query: 431 SHDRITDISTVLQPG 475
+ + V+ G
Sbjct: 340 AERHVEIPEQVVNVG 354
[244][TOP]
>UniRef100_A1UHD7 SSU ribosomal protein S1P n=3 Tax=Mycobacterium RepID=A1UHD7_MYCSK
Length = 479
Score = 96.7 bits (239), Expect = 7e-19
Identities = 53/168 (31%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW +L+ +D VKG ++ KGG++ ++ GL+GF
Sbjct: 89 LVLTKEDKEGRLILSKKRAQYERAWGTIEELKEKDEAVKGTVIEVVKGGLILDI-GLRGF 147
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLG 331
+P S + + + + KEI K +E+D+ ++ ++LS R + +Q QL
Sbjct: 148 LPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLNQLQ 207
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G++ G V S+ +GAF+D+GG+ GL+HVS++S I S V+ G
Sbjct: 208 KGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVTVG 255
Score = 56.2 bits (134), Expect = 1e-06
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Frame = +2
Query: 47 LKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGEE- 223
L+ Q + E QLQ + A+ KG + + G ++ G+ G V S++S K
Sbjct: 191 LEQTQSEVRSEFLNQLQ-KGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPS 249
Query: 224 ---LLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLG----IGSVVTGSVQSLKPYGA 382
+ E+ ++ ++VD ++ R+ LS + D IG +V G V L P+GA
Sbjct: 250 EVVTVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTKLVPFGA 309
Query: 383 FIDI-GGISGLLHVSQISHDRITDISTVLQPG 475
F+ + GI GL+H+S++S + V+Q G
Sbjct: 310 FVRVEEGIEGLVHISELSERHVEVPDQVVQVG 341
[245][TOP]
>UniRef100_C1ANQ2 30S ribosomal protein S1 n=3 Tax=Mycobacterium bovis
RepID=C1ANQ2_MYCBT
Length = 481
Score = 96.7 bits (239), Expect = 7e-19
Identities = 53/168 (31%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW L+ +D VKG ++ KGG++ ++ GL+GF
Sbjct: 89 LVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKDEAVKGTVIEVVKGGLILDI-GLRGF 147
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQ--------LG 331
+P S + + + + KEI K +E+D+ ++ ++LS R + +Q + L
Sbjct: 148 LPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLNNLQ 207
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G++ G V S+ +GAF+D+GG+ GL+HVS++S I S V+Q G
Sbjct: 208 KGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVG 255
[246][TOP]
>UniRef100_C2AT60 SSU ribosomal protein S1P n=1 Tax=Tsukamurella paurometabola DSM
20162 RepID=C2AT60_TSUPA
Length = 499
Score = 96.7 bits (239), Expect = 7e-19
Identities = 54/168 (32%), Positives = 94/168 (55%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW +L+ +D VKG ++ KGG++ ++ GL+GF
Sbjct: 94 LVLTKEDKEGRLILSKKRAQYERAWGTIEELKEKDEAVKGTVIEVVKGGLILDI-GLRGF 152
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLG 331
+P S + + + + KEI K +E+D+ ++ ++LS R + +Q QL
Sbjct: 153 LPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLHQLQ 212
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G V G V S+ +GAF+D+GG+ GL+HVS++S I S V+ G
Sbjct: 213 KGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVTVG 260
Score = 53.1 bits (126), Expect = 9e-06
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Frame = +2
Query: 47 LKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGEE- 223
L+ Q + E QLQ + V KG + + G ++ G+ G V S++S K
Sbjct: 196 LEQTQSEVRSEFLHQLQ-KGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPS 254
Query: 224 ---LLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLG----IGSVVTGSVQSLKPYGA 382
+ E+ ++ ++VD ++ R+ LS + D Q IG +V G V L P+GA
Sbjct: 255 EVVTVGDEVTVEVLDVDLDRERVSLSLKATQEDPWRQFARTHAIGQIVPGKVTKLVPFGA 314
Query: 383 FIDI-GGISGLLHVSQISHDRITDISTVLQPG 475
F+ + GI GL+H+S+++ + V+ G
Sbjct: 315 FVRVEEGIEGLVHISELAERHVEVPDQVVSVG 346
[247][TOP]
>UniRef100_C0UKJ4 SSU ribosomal protein S1P n=1 Tax=Gordonia bronchialis DSM 43247
RepID=C0UKJ4_9ACTO
Length = 487
Score = 96.7 bits (239), Expect = 7e-19
Identities = 54/168 (32%), Positives = 94/168 (55%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW +L+ +D VKG ++ KGG++ ++ GL+GF
Sbjct: 89 LVLTKEDKEGRLILSKKRAQYERAWGTIEELKEKDEAVKGTVIEVVKGGLILDI-GLRGF 147
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQG--------QLG 331
+P S + + + + KEI K +E+D+ ++ ++LS R + +Q QL
Sbjct: 148 LPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLHQLQ 207
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G V G V S+ +GAF+D+GG+ GL+HVS++S I S V+ G
Sbjct: 208 KGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVAVG 255
Score = 53.1 bits (126), Expect = 9e-06
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Frame = +2
Query: 47 LKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPFSQISTKSTGEE- 223
L+ Q + E QLQ + V KG + + G ++ G+ G V S++S K
Sbjct: 191 LEQTQSEVRSEFLHQLQ-KGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPS 249
Query: 224 ---LLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQLG----IGSVVTGSVQSLKPYGA 382
+ E+ ++ ++VD ++ R+ LS + D Q IG +V G V L P+GA
Sbjct: 250 EVVAVGDEVTVEVLDVDLDRERVSLSLKATQEDPWRQFARTHAIGQIVPGKVTKLVPFGA 309
Query: 383 FIDIG-GISGLLHVSQISHDRI 445
F+ + GI GL+H+S+++ +
Sbjct: 310 FVRVDEGIEGLVHISELAERHV 331
[248][TOP]
>UniRef100_A4IQA6 30S ribosomal protein S1 n=2 Tax=Geobacillus RepID=A4IQA6_GEOTN
Length = 387
Score = 96.7 bits (239), Expect = 7e-19
Identities = 55/165 (33%), Positives = 92/165 (55%), Gaps = 10/165 (6%)
Frame = +2
Query: 11 GENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGFVPF 190
G++ + L LS K++ AWE + A + + + KGG+VA+V G++GF+P
Sbjct: 76 GKDGEEGLLILSKKAVDAERAWEELERKFASGETFETVVKDIVKGGLVADV-GVRGFIPA 134
Query: 191 SQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQ--------GQLGIGS 340
S + + + K + +K VE+D E++R+ILSHR V + Q +L G
Sbjct: 135 SLVEPHYVEDFSDYKGKTLTVKVVELDREKNRVILSHRAVVEEEQERQQKELLSRLEAGQ 194
Query: 341 VVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
V+ G V+ + +G F+D+GG GL+H+SQ+SH R+ S V++ G
Sbjct: 195 VLDGVVRRIADFGVFVDVGGFDGLVHISQLSHTRVAHPSEVVKEG 239
Score = 61.6 bits (148), Expect = 3e-08
Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 9/131 (6%)
Frame = +2
Query: 110 VVKGKIVNANKGGVVAEVEGLKGFVPFSQIS-TKSTGEELLEKE---IPLKFVEVDEEQS 277
V+ G + GV +V G G V SQ+S T+ + KE + +K + VD EQ
Sbjct: 195 VLDGVVRRIADFGVFVDVGGFDGLVHISQLSHTRVAHPSEVVKEGDAVKVKVLAVDPEQG 254
Query: 278 RLILSHRKAVADS----QGQLGIGSVVTGSVQSLKPYGAFIDI-GGISGLLHVSQISHDR 442
RL LS ++A+ ++ VVTG+V+ L +GAF++I G+ GL+HVSQI++ R
Sbjct: 255 RLSLSIKEALPGPWEGISEKVKPSDVVTGTVKRLASFGAFVEIFPGVEGLVHVSQIANRR 314
Query: 443 ITDISTVLQPG 475
I VL+ G
Sbjct: 315 IGSPHEVLKEG 325
[249][TOP]
>UniRef100_A7BCI1 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus
ATCC 17982 RepID=A7BCI1_9ACTO
Length = 478
Score = 96.7 bits (239), Expect = 7e-19
Identities = 52/168 (30%), Positives = 97/168 (57%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW + +++ ED VV G ++ KGG++ ++ GL+GF
Sbjct: 86 LVLQKEDKEGRLLLSKKRAQYERAWGQIEKVKEEDGVVTGTVIEVVKGGLILDI-GLRGF 144
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQ--------LG 331
+P S + + + + +EI K +E+D+ ++ ++LS R + +Q + L
Sbjct: 145 LPASLVEMRRVRDLAPYIGREIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRTNFLHTLQ 204
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G V +G V S+ +GAF+D+GG+ GL+HVS++S I S V++ G
Sbjct: 205 KGQVRSGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVEVG 252
[250][TOP]
>UniRef100_A3TLI2 30S ribosomal protein S1 n=1 Tax=Janibacter sp. HTCC2649
RepID=A3TLI2_9MICO
Length = 502
Score = 96.7 bits (239), Expect = 7e-19
Identities = 53/168 (31%), Positives = 96/168 (57%), Gaps = 10/168 (5%)
Frame = +2
Query: 2 VIIGENESDDTLFLSLKSIQFGLAWERCRQLQAEDAVVKGKIVNANKGGVVAEVEGLKGF 181
+++ + + + L LS K Q+ AW +++ ED VV G ++ KGG++ ++ GL+GF
Sbjct: 91 LVLQKEDKEGRLILSKKRAQYERAWGTIEKVKEEDGVVTGTVIEVVKGGLILDI-GLRGF 149
Query: 182 VPFSQISTKSTGE--ELLEKEIPLKFVEVDEEQSRLILSHRKAVADSQGQ--------LG 331
+P S + + + + KEI K +E+D+ ++ ++LS R + +Q + L
Sbjct: 150 LPASLVEMRRVRDLQPYVGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRTTFLKELQ 209
Query: 332 IGSVVTGSVQSLKPYGAFIDIGGISGLLHVSQISHDRITDISTVLQPG 475
G V +G V S+ +GAF+D+GG+ GL+HVS++S I S V++ G
Sbjct: 210 KGQVRSGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVEVG 257