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[1][TOP]
>UniRef100_A7PI03 Chromosome chr13 scaffold_17, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PI03_VITVI
Length = 393
Score = 156 bits (394), Expect = 8e-37
Identities = 77/92 (83%), Positives = 85/92 (92%)
Frame = +3
Query: 21 PKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTK 200
PKYSKAARRFYNENF+D +RLSKVLAA+GVASRR+ EELIFEG+VTVNGSVCNTPQT+
Sbjct: 124 PKYSKAARRFYNENFRDPP-QRLSKVLAAAGVASRRNSEELIFEGRVTVNGSVCNTPQTR 182
Query: 201 VDPAKDSIYVNGNRLPKRQPRKVYLALNKPKG 296
VDPA+D IYVNGNRLPK+ P KVYLALNKPKG
Sbjct: 183 VDPARDMIYVNGNRLPKKLPPKVYLALNKPKG 214
[2][TOP]
>UniRef100_B9HLH3 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HLH3_POPTR
Length = 397
Score = 152 bits (383), Expect = 1e-35
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +3
Query: 21 PKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTK 200
P SKAARRFYNENF+D A +RLSKVLAA+GVASRRS E LIFEGKVTVNGSVCNTPQT+
Sbjct: 128 PTRSKAARRFYNENFRDQA-QRLSKVLAAAGVASRRSSEALIFEGKVTVNGSVCNTPQTR 186
Query: 201 VDPAKDSIYVNGNRLPKRQPRKVYLALNKPKG 296
VDP +DSIYVNGNRLPK+ P K+Y+ALNKPKG
Sbjct: 187 VDPGRDSIYVNGNRLPKKLPPKIYIALNKPKG 218
[3][TOP]
>UniRef100_Q10RN1 Os03g0152700 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q10RN1_ORYSJ
Length = 415
Score = 149 bits (375), Expect = 1e-34
Identities = 70/96 (72%), Positives = 84/96 (87%)
Frame = +3
Query: 9 SSPPPKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNT 188
++ PPK+SKAARRFYNEN K+ +RL+KVLAA+GVASRR+CEELIF+GKVTVNGSVC
Sbjct: 149 ATAPPKFSKAARRFYNENIKEHEPQRLAKVLAAAGVASRRTCEELIFQGKVTVNGSVCTA 208
Query: 189 PQTKVDPAKDSIYVNGNRLPKRQPRKVYLALNKPKG 296
PQTKVD +KDSIYVNGNR+ K+ P K+Y A+NKPKG
Sbjct: 209 PQTKVDISKDSIYVNGNRISKKLPPKLYFAVNKPKG 244
[4][TOP]
>UniRef100_Q8L960 Putative uncharacterized protein n=1 Tax=Arabidopsis thaliana
RepID=Q8L960_ARATH
Length = 410
Score = 146 bits (368), Expect = 8e-34
Identities = 72/96 (75%), Positives = 83/96 (86%)
Frame = +3
Query: 9 SSPPPKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNT 188
S PK SKAARRFYNENFK+ +RLSKVLAA+GVASRR+ EELIF+GKVTVNG +CNT
Sbjct: 137 SEVKPKLSKAARRFYNENFKEQP-QRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNT 195
Query: 189 PQTKVDPAKDSIYVNGNRLPKRQPRKVYLALNKPKG 296
PQT+VDP++D IYVNGNR+PK+ P KVY ALNKPKG
Sbjct: 196 PQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKG 231
[5][TOP]
>UniRef100_O80967 Putative uncharacterized protein At2g39140 n=1 Tax=Arabidopsis
thaliana RepID=O80967_ARATH
Length = 303
Score = 146 bits (368), Expect = 8e-34
Identities = 72/96 (75%), Positives = 83/96 (86%)
Frame = +3
Query: 9 SSPPPKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNT 188
S PK SKAARRFYNENFK+ +RLSKVLAA+GVASRR+ EELIF+GKVTVNG +CNT
Sbjct: 137 SEVKPKLSKAARRFYNENFKEQP-QRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNT 195
Query: 189 PQTKVDPAKDSIYVNGNRLPKRQPRKVYLALNKPKG 296
PQT+VDP++D IYVNGNR+PK+ P KVY ALNKPKG
Sbjct: 196 PQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKG 231
[6][TOP]
>UniRef100_C5WXU8 Putative uncharacterized protein Sb01g046770 n=1 Tax=Sorghum
bicolor RepID=C5WXU8_SORBI
Length = 407
Score = 145 bits (365), Expect = 2e-33
Identities = 69/93 (74%), Positives = 82/93 (88%)
Frame = +3
Query: 18 PPKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQT 197
PPK+SKAARRFYNEN K+ +RL+KVLAA+GVASRR+ EELIF+GKVTVNGSVC +PQT
Sbjct: 137 PPKFSKAARRFYNENIKEREPQRLAKVLAAAGVASRRTSEELIFQGKVTVNGSVCTSPQT 196
Query: 198 KVDPAKDSIYVNGNRLPKRQPRKVYLALNKPKG 296
KVD +KDSIYVNGNR+ K+ P K+Y A+NKPKG
Sbjct: 197 KVDISKDSIYVNGNRISKKLPPKLYFAVNKPKG 229
[7][TOP]
>UniRef100_B6U7U0 Ribosomal large subunit pseudouridine synthase B n=1 Tax=Zea mays
RepID=B6U7U0_MAIZE
Length = 406
Score = 143 bits (360), Expect = 7e-33
Identities = 68/93 (73%), Positives = 81/93 (87%)
Frame = +3
Query: 18 PPKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQT 197
PPK+SKAARRFYNEN K+ +RL+KVLAA+GVASRR+ EELIF+GK TVNGSVC +PQT
Sbjct: 136 PPKFSKAARRFYNENIKEREPQRLAKVLAAAGVASRRTSEELIFQGKXTVNGSVCTSPQT 195
Query: 198 KVDPAKDSIYVNGNRLPKRQPRKVYLALNKPKG 296
KVD +KDSIYVNGNR+ K+ P K+Y A+NKPKG
Sbjct: 196 KVDISKDSIYVNGNRISKKLPPKLYFAVNKPKG 228
[8][TOP]
>UniRef100_A9SG51 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SG51_PHYPA
Length = 560
Score = 124 bits (310), Expect = 4e-27
Identities = 61/96 (63%), Positives = 73/96 (76%)
Frame = +3
Query: 9 SSPPPKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNT 188
S PKYSKAARRFYNE ++ ERLSKVLAA+GVASRR E++IF G+V VNG VC
Sbjct: 219 SGAVPKYSKAARRFYNETYRAEC-ERLSKVLAAAGVASRRGSEDIIFAGRVKVNGKVCTV 277
Query: 189 PQTKVDPAKDSIYVNGNRLPKRQPRKVYLALNKPKG 296
PQT V+P KD+I+++G LPK+ P K Y ALNKPKG
Sbjct: 278 PQTPVNPLKDTIFLDGRSLPKKPPPKFYFALNKPKG 313
[9][TOP]
>UniRef100_B8AND7 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8AND7_ORYSI
Length = 279
Score = 95.1 bits (235), Expect = 2e-18
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = +3
Query: 126 RSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPRKVYLALNKPKG 296
R+CEELIF+GKVTVNGSVC PQTKVD +KDSIYVNGNR+ K+ P K+Y A+NKPKG
Sbjct: 46 RTCEELIFQGKVTVNGSVCTAPQTKVDISKDSIYVNGNRISKKLPPKLYFAVNKPKG 102
[10][TOP]
>UniRef100_B9RRM2 Ribosomal large subunit pseudouridine synthase B, putative n=1
Tax=Ricinus communis RepID=B9RRM2_RICCO
Length = 315
Score = 90.5 bits (223), Expect = 5e-17
Identities = 46/55 (83%), Positives = 51/55 (92%)
Frame = +3
Query: 30 SKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQ 194
SKAARRFYNENF++ +RLSKVLAASGVASRR+ EELIF+GKVTVNGSVCNTPQ
Sbjct: 135 SKAARRFYNENFREPP-QRLSKVLAASGVASRRNSEELIFQGKVTVNGSVCNTPQ 188
[11][TOP]
>UniRef100_UPI0001789AB0 pseudouridine synthase n=1 Tax=Geobacillus sp. Y412MC10
RepID=UPI0001789AB0
Length = 251
Score = 81.3 bits (199), Expect = 3e-14
Identities = 42/72 (58%), Positives = 50/72 (69%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K++A +GVASRR CEELI EGKV VNG TK DPA+D I V+G P +
Sbjct: 2 ERLQKIMAQAGVASRRKCEELILEGKVQVNGETVTELGTKADPAQDIITVSGK--PIKNE 59
Query: 261 RKVYLALNKPKG 296
+KVY+ LNKPKG
Sbjct: 60 KKVYVMLNKPKG 71
[12][TOP]
>UniRef100_A4X690 Pseudouridine synthase n=1 Tax=Salinispora tropica CNB-440
RepID=A4X690_SALTO
Length = 262
Score = 81.3 bits (199), Expect = 3e-14
Identities = 43/72 (59%), Positives = 52/72 (72%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KVLAA+GV SRR+CE+LIF +VTVNG V + DP D+IYVNG RL +
Sbjct: 25 ERLQKVLAAAGVGSRRACEDLIFRRRVTVNGRVAQLGD-RADPTSDTIYVNGERL-QADT 82
Query: 261 RKVYLALNKPKG 296
R VYLA+NKP+G
Sbjct: 83 RLVYLAMNKPRG 94
[13][TOP]
>UniRef100_Q6MEW5 Pseudouridine synthase n=1 Tax=Candidatus Protochlamydia
amoebophila UWE25 RepID=Q6MEW5_PARUW
Length = 234
Score = 80.9 bits (198), Expect = 4e-14
Identities = 43/71 (60%), Positives = 52/71 (73%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
RLSKVLAA+G+ASRR+CEELIF+G V VNG V PQTKV+P D+I V + + R+
Sbjct: 5 RLSKVLAAAGIASRRACEELIFQGLVKVNGEVIKVPQTKVNPEIDTITVR-DEVINRKED 63
Query: 264 KVYLALNKPKG 296
KVY LNKP G
Sbjct: 64 KVYYLLNKPPG 74
[14][TOP]
>UniRef100_C6CU79 Pseudouridine synthase n=1 Tax=Paenibacillus sp. JDR-2
RepID=C6CU79_PAESJ
Length = 250
Score = 80.9 bits (198), Expect = 4e-14
Identities = 43/72 (59%), Positives = 47/72 (65%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K+LA +GVASRR CEELI G V VNG T K DPA D I VNG P R
Sbjct: 5 ERLQKILAQAGVASRRKCEELILAGAVEVNGEKVTTLGVKADPATDEITVNGK--PIRSE 62
Query: 261 RKVYLALNKPKG 296
+K+YL LNKPKG
Sbjct: 63 KKIYLMLNKPKG 74
[15][TOP]
>UniRef100_C6J3Z9 Pseudouridine synthase n=1 Tax=Paenibacillus sp. oral taxon 786
str. D14 RepID=C6J3Z9_9BACL
Length = 256
Score = 78.2 bits (191), Expect = 3e-13
Identities = 42/72 (58%), Positives = 47/72 (65%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K+LAA+GVASRR CEELI GKV VNG T TK DP+ D I V G P
Sbjct: 10 ERLQKILAAAGVASRRKCEELILSGKVQVNGETVTTLGTKADPSVDVITVEGK--PIGAE 67
Query: 261 RKVYLALNKPKG 296
+K+YL NKPKG
Sbjct: 68 KKLYLMFNKPKG 79
[16][TOP]
>UniRef100_C4RHY3 Pseudouridine synthase n=1 Tax=Micromonospora sp. ATCC 39149
RepID=C4RHY3_9ACTO
Length = 256
Score = 78.2 bits (191), Expect = 3e-13
Identities = 43/72 (59%), Positives = 51/72 (70%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KVLAA+GV SRR+CE+LIF +VTVNG V K DP +D I V+G RL +
Sbjct: 19 ERLQKVLAAAGVGSRRACEDLIFRRRVTVNGKVAQLGD-KADPTRDVILVDGERL-QADT 76
Query: 261 RKVYLALNKPKG 296
R VYLALNKP+G
Sbjct: 77 RLVYLALNKPRG 88
[17][TOP]
>UniRef100_A6LUN0 Pseudouridine synthase n=1 Tax=Clostridium beijerinckii NCIMB 8052
RepID=A6LUN0_CLOB8
Length = 236
Score = 77.8 bits (190), Expect = 4e-13
Identities = 41/72 (56%), Positives = 48/72 (66%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K LA GVASRR CEELI GKV VNG + N KVDP KD I +G + K++
Sbjct: 3 ERLQKYLANCGVASRRKCEELIISGKVKVNGVIVNEVGIKVDPLKDMIEYDGKEIKKKED 62
Query: 261 RKVYLALNKPKG 296
KVY+ LNKP+G
Sbjct: 63 -KVYIMLNKPEG 73
[18][TOP]
>UniRef100_A0Q0L3 Pseudouridine synthase n=1 Tax=Clostridium novyi NT
RepID=A0Q0L3_CLONN
Length = 236
Score = 77.4 bits (189), Expect = 5e-13
Identities = 38/72 (52%), Positives = 53/72 (73%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A+ GVASRR CEE+I +V VNG++ N KVDP+KD +YV+ ++L +
Sbjct: 3 ERLQKYMASCGVASRRKCEEIIISNRVKVNGTIVNELGFKVDPSKDKVYVD-SKLIFLEE 61
Query: 261 RKVYLALNKPKG 296
+KVY+ALNKP+G
Sbjct: 62 KKVYIALNKPEG 73
[19][TOP]
>UniRef100_A8LYU1 Pseudouridine synthase n=1 Tax=Salinispora arenicola CNS-205
RepID=A8LYU1_SALAI
Length = 256
Score = 77.0 bits (188), Expect = 6e-13
Identities = 40/72 (55%), Positives = 52/72 (72%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KVLAA+GV SRR+CE+LIF +VTVNG + + DP D+I+V+G RL +
Sbjct: 19 ERLQKVLAAAGVGSRRACEDLIFRRRVTVNGRIAQLGD-RADPTSDTIHVDGERL-QADT 76
Query: 261 RKVYLALNKPKG 296
R VYLA+NKP+G
Sbjct: 77 RLVYLAMNKPRG 88
[20][TOP]
>UniRef100_C6PTN6 Pseudouridine synthase n=1 Tax=Clostridium carboxidivorans P7
RepID=C6PTN6_9CLOT
Length = 234
Score = 77.0 bits (188), Expect = 6e-13
Identities = 37/72 (51%), Positives = 51/72 (70%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +AA G+ASRR CEE+I + +V VNG + N K+D KD + ++G +L K++
Sbjct: 3 ERLQKYMAACGIASRRKCEEIILQARVKVNGKIVNELGVKIDEEKDLVTLDG-KLIKKEK 61
Query: 261 RKVYLALNKPKG 296
KVY+ALNKPKG
Sbjct: 62 NKVYIALNKPKG 73
[21][TOP]
>UniRef100_C5VSR0 Pseudouridine synthase n=1 Tax=Clostridium botulinum D str. 1873
RepID=C5VSR0_CLOBO
Length = 236
Score = 76.6 bits (187), Expect = 8e-13
Identities = 39/72 (54%), Positives = 52/72 (72%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +AA GVASRR CEE+I + +V VNG + N KVDPAKD ++V+ + L +
Sbjct: 3 ERLQKYMAACGVASRRKCEEIILQDRVKVNGEIVNELGFKVDPAKDRVHVD-SVLISLEE 61
Query: 261 RKVYLALNKPKG 296
+KVY+ALNKP+G
Sbjct: 62 KKVYIALNKPEG 73
[22][TOP]
>UniRef100_Q3AT60 Pseudouridine synthase n=1 Tax=Chlorobium chlorochromatii CaD3
RepID=Q3AT60_CHLCH
Length = 251
Score = 76.3 bits (186), Expect = 1e-12
Identities = 31/82 (37%), Positives = 56/82 (68%)
Frame = +3
Query: 48 FYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIY 227
+ + ++ G R+++ LA G+ASRR+ ++L+ EG+V +NG + TP KV+P++D +
Sbjct: 2 YMKQEKSNNDGMRINRFLAMCGIASRRAADQLVQEGRVCINGKIVTTPGVKVNPSRDEVI 61
Query: 228 VNGNRLPKRQPRKVYLALNKPK 293
++G R + + RKVY+ LNKP+
Sbjct: 62 IDGKRFAQPENRKVYILLNKPR 83
[23][TOP]
>UniRef100_C0ZC81 Pseudouridine synthase n=1 Tax=Brevibacillus brevis NBRC 100599
RepID=C0ZC81_BREBN
Length = 249
Score = 76.3 bits (186), Expect = 1e-12
Identities = 43/72 (59%), Positives = 47/72 (65%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KVLA +GVASRR CEELI +GKV VNG V KVDP KD I VNG ++ Q
Sbjct: 2 ERLQKVLAHAGVASRRHCEELIAQGKVQVNGQVVREQGIKVDPLKDKIVVNGQQVKLEQ- 60
Query: 261 RKVYLALNKPKG 296
VYL L KP G
Sbjct: 61 -HVYLLLYKPTG 71
[24][TOP]
>UniRef100_B3U4L2 Pseudouridine synthase n=1 Tax=Candidatus Nitrospira defluvii
RepID=B3U4L2_9BACT
Length = 420
Score = 75.9 bits (185), Expect = 1e-12
Identities = 40/70 (57%), Positives = 49/70 (70%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
RL K++A +G+ASRR EELI G+VT+NGSV TKVDPA+D + V+G L QP
Sbjct: 4 RLQKLIAGTGLASRRKAEELITSGRVTINGSVVKELGTKVDPARDHVKVDGKHLRAAQP- 62
Query: 264 KVYLALNKPK 293
VYL LNKPK
Sbjct: 63 YVYLILNKPK 72
[25][TOP]
>UniRef100_A1SJL6 Pseudouridine synthase n=1 Tax=Nocardioides sp. JS614
RepID=A1SJL6_NOCSJ
Length = 251
Score = 75.5 bits (184), Expect = 2e-12
Identities = 42/71 (59%), Positives = 47/71 (66%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
RL K+LA SGVASRR CEEL+ EG V V+G V TKVDP I V+G RLP
Sbjct: 15 RLQKLLAQSGVASRRKCEELMLEGHVVVDGEVVTRLGTKVDPRTAVIRVDGKRLPP-VSE 73
Query: 264 KVYLALNKPKG 296
KVYL LNKP+G
Sbjct: 74 KVYLVLNKPRG 84
[26][TOP]
>UniRef100_Q0YTP3 Pseudouridine synthase n=1 Tax=Chlorobium ferrooxidans DSM 13031
RepID=Q0YTP3_9CHLB
Length = 247
Score = 75.5 bits (184), Expect = 2e-12
Identities = 34/79 (43%), Positives = 54/79 (68%)
Frame = +3
Query: 57 ENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNG 236
+N +S R+++ LA G+ASRR+ ++L+ EG+V VNG+V P TKV+P KD + V+G
Sbjct: 2 KNSTNSEEVRINRFLALCGIASRRAADQLVLEGRVMVNGTVITQPGTKVNPDKDEVIVDG 61
Query: 237 NRLPKRQPRKVYLALNKPK 293
+ + + RKVY+ NKP+
Sbjct: 62 QKYAQPESRKVYILFNKPR 80
[27][TOP]
>UniRef100_B9E1X9 Pseudouridine synthase n=2 Tax=Clostridium kluyveri
RepID=B9E1X9_CLOK1
Length = 245
Score = 75.1 bits (183), Expect = 2e-12
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +AA GVASRR CE +I EG+V VNG V N T +D +D I V+ N++ K++
Sbjct: 9 ERLHKYMAACGVASRRKCEHIISEGRVKVNGVVVNKLGTTIDDERDEILVD-NKIIKKEN 67
Query: 261 RKVYLALNKPKG 296
+KVY+ LNKP+G
Sbjct: 68 KKVYILLNKPRG 79
[28][TOP]
>UniRef100_A4J3M3 Pseudouridine synthase n=1 Tax=Desulfotomaculum reducens MI-1
RepID=A4J3M3_DESRM
Length = 309
Score = 75.1 bits (183), Expect = 2e-12
Identities = 40/72 (55%), Positives = 47/72 (65%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K+LA +GVASRR EELI G+V VNG KVDP KD I V G LP +
Sbjct: 3 ERLQKILAKAGVASRRHSEELIISGQVKVNGKTVTEMGLKVDPTKDKIEVKGKPLPPLE- 61
Query: 261 RKVYLALNKPKG 296
+KVYL +NKP+G
Sbjct: 62 KKVYLLMNKPRG 73
[29][TOP]
>UniRef100_B1B9P1 Pseudouridine synthase n=1 Tax=Clostridium botulinum C str. Eklund
RepID=B1B9P1_CLOBO
Length = 236
Score = 75.1 bits (183), Expect = 2e-12
Identities = 38/72 (52%), Positives = 52/72 (72%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A+ GVASRR CEE+I +V VNG+V N KVDP+KD +YV+ ++L +
Sbjct: 3 ERLQKYMASCGVASRRKCEEIITSNRVQVNGTVVNELGFKVDPSKDKVYVD-SKLIFLEE 61
Query: 261 RKVYLALNKPKG 296
+ VY+ALNKP+G
Sbjct: 62 KNVYIALNKPEG 73
[30][TOP]
>UniRef100_B8G2X0 Pseudouridine synthase n=1 Tax=Chloroflexus aggregans DSM 9485
RepID=B8G2X0_CHLAD
Length = 567
Score = 74.3 bits (181), Expect = 4e-12
Identities = 39/73 (53%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KVLA++G+ASRR CEELI G+VTVNG V P T+VD D + V+G P R P
Sbjct: 4 ERLQKVLASAGIASRRDCEELIAAGRVTVNGRVVTVPGTRVDLEHDEVLVDGQ--PLRMP 61
Query: 261 -RKVYLALNKPKG 296
++ Y+ L+KP G
Sbjct: 62 AKRTYIMLHKPAG 74
[31][TOP]
>UniRef100_UPI0001693918 pseudouridylate synthase n=1 Tax=Paenibacillus larvae subsp. larvae
BRL-230010 RepID=UPI0001693918
Length = 249
Score = 73.9 bits (180), Expect = 5e-12
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KVLAA+GVASRR CEE+I G+V VN V +T KV+P +D I V+G + ++
Sbjct: 3 ERLQKVLAAAGVASRRKCEEIILAGRVEVNDKVVSTLGVKVNPHQDVIKVDGRAIQNQE- 61
Query: 261 RKVYLALNKPKG 296
K+Y+ NKPKG
Sbjct: 62 -KIYILFNKPKG 72
[32][TOP]
>UniRef100_C4FR44 Pseudouridine synthase n=1 Tax=Veillonella dispar ATCC 17748
RepID=C4FR44_9FIRM
Length = 242
Score = 73.9 bits (180), Expect = 5e-12
Identities = 40/72 (55%), Positives = 46/72 (63%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A+ GVASRR EELI EGKV VNG K+DP KD + VNG L + +P
Sbjct: 2 ERLQKFIASCGVASRRKAEELITEGKVQVNGRKVTELGVKIDPQKDKVKVNGQLLAQEKP 61
Query: 261 RKVYLALNKPKG 296
VY LNKPKG
Sbjct: 62 --VYYLLNKPKG 71
[33][TOP]
>UniRef100_Q8XLG1 Pseudouridine synthase n=1 Tax=Clostridium perfringens
RepID=Q8XLG1_CLOPE
Length = 236
Score = 73.6 bits (179), Expect = 7e-12
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A GVASRR CEE+I GKV VN +V ++ TKVDP+ D + VN N++ + +
Sbjct: 3 ERLQKYMARCGVASRRKCEEIICSGKVKVNDTVVDSLGTKVDPSVDVVSVN-NKVIRPEE 61
Query: 261 RKVYLALNKPKG 296
KVY+ LNKP+G
Sbjct: 62 NKVYIMLNKPEG 73
[34][TOP]
>UniRef100_Q8KF53 Pseudouridine synthase n=1 Tax=Chlorobaculum tepidum
RepID=Q8KF53_CHLTE
Length = 247
Score = 73.6 bits (179), Expect = 7e-12
Identities = 33/70 (47%), Positives = 48/70 (68%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
R++K LA GVASRR+ ++L+ EGKV+VNG + + P KVDP D + V+G + + R
Sbjct: 11 RINKYLAMCGVASRRAADQLVLEGKVSVNGHIADEPGFKVDPRNDEVIVDGRLMATPEAR 70
Query: 264 KVYLALNKPK 293
KVY+ NKP+
Sbjct: 71 KVYILFNKPR 80
[35][TOP]
>UniRef100_C6R1Z2 Pseudouridine synthase n=1 Tax=Rothia mucilaginosa ATCC 25296
RepID=C6R1Z2_9MICC
Length = 386
Score = 73.6 bits (179), Expect = 7e-12
Identities = 39/78 (50%), Positives = 52/78 (66%)
Frame = +3
Query: 63 FKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNR 242
F D G RL K+LA +GVASRR CEE+I EG+VTVNG V +VDP+K ++ V+G
Sbjct: 142 FYDHDGVRLQKLLAQAGVASRRVCEEMITEGRVTVNGEVVTELGVRVDPSKVTVQVDGMT 201
Query: 243 LPKRQPRKVYLALNKPKG 296
+ + + VY+A NKP G
Sbjct: 202 V-QTNDKLVYMAFNKPAG 218
[36][TOP]
>UniRef100_B7CAK4 Pseudouridine synthase n=1 Tax=Eubacterium biforme DSM 3989
RepID=B7CAK4_9FIRM
Length = 242
Score = 73.6 bits (179), Expect = 7e-12
Identities = 39/72 (54%), Positives = 49/72 (68%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +G+ SRR EELI +GKV VNG +C+ TKV +D I VNGN + K +
Sbjct: 2 ERLQKVIAQAGICSRRKAEELILDGKVKVNGEICDVLGTKVS-KQDIIEVNGNMISKEE- 59
Query: 261 RKVYLALNKPKG 296
KVY +NKPKG
Sbjct: 60 -KVYYIMNKPKG 70
[37][TOP]
>UniRef100_B8DUD9 Pseudouridine synthase n=4 Tax=Bifidobacterium animalis subsp.
lactis RepID=B8DUD9_BIFA0
Length = 257
Score = 73.6 bits (179), Expect = 7e-12
Identities = 39/92 (42%), Positives = 59/92 (64%)
Frame = +3
Query: 18 PPKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQT 197
P YS+A +++ N D G RL K+LA +G SRR CEE+I +G+V V+G + T
Sbjct: 2 PHIYSQARKQYEN----DGDGIRLQKLLAQAGFGSRRKCEEMITDGRVEVDGELVTELGT 57
Query: 198 KVDPAKDSIYVNGNRLPKRQPRKVYLALNKPK 293
+VDP + + V+G+R+ + PR + LALNKP+
Sbjct: 58 RVDPKRQQVRVDGSRI-RLNPRHITLALNKPR 88
[38][TOP]
>UniRef100_Q67NH5 Pseudouridine synthase n=1 Tax=Symbiobacterium thermophilum
RepID=Q67NH5_SYMTH
Length = 254
Score = 73.2 bits (178), Expect = 9e-12
Identities = 42/72 (58%), Positives = 48/72 (66%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +GVASRR CE LI G+VTVNG V TKV P KD I V+G L +
Sbjct: 3 ERLQKVMARAGVASRRHCEALIQAGRVTVNGQVVTQLGTKVVPGKDVIEVDGRPLGTPE- 61
Query: 261 RKVYLALNKPKG 296
KVY+ LNKPKG
Sbjct: 62 TKVYVMLNKPKG 73
[39][TOP]
>UniRef100_C9LUH3 Ribosomal large subunit pseudouridine synthase B n=1
Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUH3_9FIRM
Length = 242
Score = 73.2 bits (178), Expect = 9e-12
Identities = 38/72 (52%), Positives = 49/72 (68%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K+++ +GVASRR EELI G+VTV+G+V P TK D + I V+G R+P +
Sbjct: 3 ERLQKIISRAGVASRRKAEELIAAGRVTVDGAVVREPGTKADASTARIEVDGKRIPAEE- 61
Query: 261 RKVYLALNKPKG 296
R VY LNKPKG
Sbjct: 62 RLVYFLLNKPKG 73
[40][TOP]
>UniRef100_Q0STT8 Pseudouridine synthase n=1 Tax=Clostridium perfringens SM101
RepID=Q0STT8_CLOPS
Length = 236
Score = 72.8 bits (177), Expect = 1e-11
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A GVASRR CEE+I GKV VN +V ++ TKVDP+ D + VN N++ +
Sbjct: 3 ERLQKYMARCGVASRRKCEEIICSGKVKVNDTVVDSLGTKVDPSVDVVSVN-NKVISPEE 61
Query: 261 RKVYLALNKPKG 296
KVY+ LNKP+G
Sbjct: 62 NKVYIMLNKPEG 73
[41][TOP]
>UniRef100_B8FA23 Pseudouridine synthase n=1 Tax=Desulfatibacillum alkenivorans AK-01
RepID=B8FA23_DESAA
Length = 234
Score = 72.8 bits (177), Expect = 1e-11
Identities = 38/72 (52%), Positives = 46/72 (63%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K LA +GV SRR EELI +GKV VNG + K+DP KD I VNG ++ +Q
Sbjct: 4 ERLQKYLAHAGVCSRRHAEELISQGKVAVNGEIVTQMGVKIDPDKDEIAVNGKKVEPKQS 63
Query: 261 RKVYLALNKPKG 296
R Y+ LNKP G
Sbjct: 64 R-TYIMLNKPAG 74
[42][TOP]
>UniRef100_B4SCY9 Pseudouridine synthase n=1 Tax=Pelodictyon phaeoclathratiforme BU-1
RepID=B4SCY9_PELPB
Length = 247
Score = 72.8 bits (177), Expect = 1e-11
Identities = 30/70 (42%), Positives = 50/70 (71%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
R+++ LA+ G+ASRR+ ++L+ +G+V VNG+V TP KV P +D + V+G + + + R
Sbjct: 11 RINRYLASCGIASRRAADQLVLDGRVMVNGTVITTPGIKVSPTRDEVIVDGEKFAQPEHR 70
Query: 264 KVYLALNKPK 293
KVY+ NKP+
Sbjct: 71 KVYILFNKPR 80
[43][TOP]
>UniRef100_A5D1T3 Pseudouridine synthase n=1 Tax=Pelotomaculum thermopropionicum SI
RepID=A5D1T3_PELTS
Length = 252
Score = 72.8 bits (177), Expect = 1e-11
Identities = 41/81 (50%), Positives = 49/81 (60%)
Frame = +3
Query: 54 NENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVN 233
N + + ERL KV+A +GVASRR CE LI G V VNG V KVDPA+D I V
Sbjct: 5 NRSRRGDPVERLQKVMARAGVASRRHCERLIAAGAVKVNGKVVTEVGCKVDPARDKIQV- 63
Query: 234 GNRLPKRQPRKVYLALNKPKG 296
GNR PR+ Y+ L KP+G
Sbjct: 64 GNRTISLFPRRYYILLYKPRG 84
[44][TOP]
>UniRef100_C1I6Q6 Pseudouridine synthase n=1 Tax=Clostridium sp. 7_2_43FAA
RepID=C1I6Q6_9CLOT
Length = 242
Score = 72.8 bits (177), Expect = 1e-11
Identities = 35/72 (48%), Positives = 46/72 (63%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A GVASRR CEE+I KV +N V N K+DP KD ++ NG R+ +
Sbjct: 3 ERLQKYMARCGVASRRKCEEIILSSKVKINDKVVNELGVKIDPYKDKVFYNGKRILPEE- 61
Query: 261 RKVYLALNKPKG 296
K+Y+ LNKP+G
Sbjct: 62 NKLYIMLNKPEG 73
[45][TOP]
>UniRef100_Q3B289 Pseudouridine synthase n=1 Tax=Chlorobium luteolum DSM 273
RepID=Q3B289_PELLD
Length = 250
Score = 72.4 bits (176), Expect = 1e-11
Identities = 30/80 (37%), Positives = 53/80 (66%)
Frame = +3
Query: 54 NENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVN 233
N K + R+++ LA G+ASRR+ ++++ EG+VT+NG + + P KV P KD + V+
Sbjct: 4 NVEKKQNEAVRINRYLAMCGIASRRAADQMVLEGRVTINGVLASEPGVKVVPGKDEVIVD 63
Query: 234 GNRLPKRQPRKVYLALNKPK 293
G++ + + RK+Y+ NKP+
Sbjct: 64 GSKFAQPEGRKIYILFNKPR 83
[46][TOP]
>UniRef100_C3PGG1 Pseudouridine synthase n=1 Tax=Corynebacterium aurimucosum ATCC
700975 RepID=C3PGG1_CORA7
Length = 305
Score = 72.4 bits (176), Expect = 1e-11
Identities = 41/81 (50%), Positives = 51/81 (62%)
Frame = +3
Query: 54 NENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVN 233
N+ + GERL KVLA +GVASRR E LI EG+V VNG V T+VDP KD I V+
Sbjct: 56 NKKNSQNQGERLQKVLAKAGVASRRHAEILIDEGRVEVNGQVIIKQGTRVDPNKDVIRVD 115
Query: 234 GNRLPKRQPRKVYLALNKPKG 296
G R+ + + Y LNKP+G
Sbjct: 116 GTRINVNEETQ-YFVLNKPRG 135
[47][TOP]
>UniRef100_A7NF12 Pseudouridine synthase n=1 Tax=Roseiflexus castenholzii DSM 13941
RepID=A7NF12_ROSCS
Length = 556
Score = 72.4 bits (176), Expect = 1e-11
Identities = 38/74 (51%), Positives = 48/74 (64%)
Frame = +3
Query: 75 AGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKR 254
+ ERL KVLA++G+ASRR CEE I G+V VNG V P T+VDP D I V+G + K
Sbjct: 2 SAERLQKVLASAGIASRRDCEEYIAAGRVMVNGKVVRIPGTRVDPEHDEILVDGKPIGKI 61
Query: 255 QPRKVYLALNKPKG 296
R Y+ L+KP G
Sbjct: 62 HHR-TYVMLHKPAG 74
[48][TOP]
>UniRef100_A5V220 Pseudouridine synthase n=1 Tax=Roseiflexus sp. RS-1
RepID=A5V220_ROSS1
Length = 624
Score = 72.4 bits (176), Expect = 1e-11
Identities = 38/74 (51%), Positives = 48/74 (64%)
Frame = +3
Query: 75 AGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKR 254
+ ERL KVLA++G+ASRR CEE I G+V VNG V P T+VDP D I V+G + K
Sbjct: 2 SAERLQKVLASAGIASRRDCEEYIAAGRVMVNGKVVRIPGTRVDPEHDEILVDGRPIGKI 61
Query: 255 QPRKVYLALNKPKG 296
R Y+ L+KP G
Sbjct: 62 HHR-TYVMLHKPAG 74
[49][TOP]
>UniRef100_C9R7X1 Pseudouridine synthase n=1 Tax=Ammonifex degensii KC4
RepID=C9R7X1_9THEO
Length = 251
Score = 72.4 bits (176), Expect = 1e-11
Identities = 40/72 (55%), Positives = 49/72 (68%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KVLA +G+ASRR EELI G+V VNG V + KVDP +DSI V+G + K
Sbjct: 4 ERLQKVLARAGIASRRKAEELIVAGRVKVNGQVVDKLGVKVDPERDSIEVDGKPV-KLPE 62
Query: 261 RKVYLALNKPKG 296
R VYLA +KP+G
Sbjct: 63 RLVYLAFHKPRG 74
[50][TOP]
>UniRef100_B1RT56 Pseudouridine synthase n=1 Tax=Clostridium perfringens NCTC 8239
RepID=B1RT56_CLOPE
Length = 236
Score = 72.4 bits (176), Expect = 1e-11
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A GVASRR CEE+I GKV VN V ++ TKVDP+ D + VN N++ + +
Sbjct: 3 ERLQKYMARCGVASRRKCEEIICSGKVKVNDIVVDSLGTKVDPSVDVVSVN-NKVIRPEE 61
Query: 261 RKVYLALNKPKG 296
KVY+ LNKP+G
Sbjct: 62 NKVYIMLNKPEG 73
[51][TOP]
>UniRef100_B1RJS2 Pseudouridine synthase n=2 Tax=Clostridium perfringens
RepID=B1RJS2_CLOPE
Length = 236
Score = 72.4 bits (176), Expect = 1e-11
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A GVASRR CEE+I GKV VN V ++ TKVDP+ D + VN N++ + +
Sbjct: 3 ERLQKYMARCGVASRRKCEEIICSGKVKVNDIVVDSLGTKVDPSVDVVSVN-NKVIRPEE 61
Query: 261 RKVYLALNKPKG 296
KVY+ LNKP+G
Sbjct: 62 NKVYIMLNKPEG 73
[52][TOP]
>UniRef100_Q0TRF8 Pseudouridine synthase n=3 Tax=Clostridium perfringens
RepID=Q0TRF8_CLOP1
Length = 236
Score = 72.4 bits (176), Expect = 1e-11
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A GVASRR CEE+I GKV VN V ++ TKVDP+ D + VN N++ + +
Sbjct: 3 ERLQKYMARCGVASRRKCEEIICSGKVKVNDIVVDSLGTKVDPSVDVVSVN-NKVIRPEE 61
Query: 261 RKVYLALNKPKG 296
KVY+ LNKP+G
Sbjct: 62 NKVYIMLNKPEG 73
[53][TOP]
>UniRef100_C0BTK3 Pseudouridine synthase n=1 Tax=Bifidobacterium pseudocatenulatum
DSM 20438 RepID=C0BTK3_9BIFI
Length = 257
Score = 72.0 bits (175), Expect = 2e-11
Identities = 40/92 (43%), Positives = 57/92 (61%)
Frame = +3
Query: 18 PPKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQT 197
P YS+AA+ ++N G RL K+LA +G SRR CEE+I EG+V ++G + T
Sbjct: 2 PNAYSRAAKAHTHDN----EGIRLQKLLAQAGFGSRRKCEEIITEGRVEIDGELVTELGT 57
Query: 198 KVDPAKDSIYVNGNRLPKRQPRKVYLALNKPK 293
+VDP + V+G+R+ + P V LALNKPK
Sbjct: 58 RVDPKHQEVRVDGSRV-RVNPNHVTLALNKPK 88
[54][TOP]
>UniRef100_B6XTE8 Pseudouridine synthase n=1 Tax=Bifidobacterium catenulatum DSM
16992 RepID=B6XTE8_9BIFI
Length = 257
Score = 72.0 bits (175), Expect = 2e-11
Identities = 40/92 (43%), Positives = 57/92 (61%)
Frame = +3
Query: 18 PPKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQT 197
P YS+AA+ ++N G RL K+LA +G SRR CEE+I EG+V ++G + T
Sbjct: 2 PNAYSRAAKAHTHDN----EGIRLQKLLAQAGFGSRRKCEEIITEGRVEIDGELVTELGT 57
Query: 198 KVDPAKDSIYVNGNRLPKRQPRKVYLALNKPK 293
+VDP + V+G+R+ + P V LALNKPK
Sbjct: 58 RVDPKHQEVRVDGSRV-RVNPNHVTLALNKPK 88
[55][TOP]
>UniRef100_A7BCE9 Pseudouridine synthase n=1 Tax=Actinomyces odontolyticus ATCC 17982
RepID=A7BCE9_9ACTO
Length = 249
Score = 72.0 bits (175), Expect = 2e-11
Identities = 36/73 (49%), Positives = 52/73 (71%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
G RL KVLA +GVASRR+ E++I +G+V+V+G+V +VDPAK I+V+G RL +
Sbjct: 10 GVRLQKVLAQAGVASRRASEQMIADGRVSVDGTVVRNQGVRVDPAKQVIHVDGERLILDE 69
Query: 258 PRKVYLALNKPKG 296
+ + LA+NKP G
Sbjct: 70 TKHIVLAVNKPIG 82
[56][TOP]
>UniRef100_Q01SF5 Pseudouridine synthase n=1 Tax=Candidatus Solibacter usitatus
Ellin6076 RepID=Q01SF5_SOLUE
Length = 249
Score = 71.6 bits (174), Expect = 3e-11
Identities = 39/74 (52%), Positives = 52/74 (70%)
Frame = +3
Query: 75 AGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKR 254
A ERL K+L+ +GV+SRR E+L+ EG+VTVNGSV +K D +D I V+G RL K
Sbjct: 2 AEERLQKILSQAGVSSRRQAEKLMQEGRVTVNGSVITELGSKADLDRDHIKVDG-RLLKA 60
Query: 255 QPRKVYLALNKPKG 296
++Y+ALNKPKG
Sbjct: 61 PKHQIYIALNKPKG 74
[57][TOP]
>UniRef100_C8VZ14 Pseudouridine synthase n=1 Tax=Desulfotomaculum acetoxidans DSM 771
RepID=C8VZ14_9FIRM
Length = 264
Score = 71.6 bits (174), Expect = 3e-11
Identities = 38/72 (52%), Positives = 47/72 (65%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +G+ASRR CEELI EG V VNG + KVDP KD I V G ++ R
Sbjct: 12 ERLQKVMARAGIASRRKCEELIAEGVVKVNGRLVKEQGIKVDPQKDRIMVQG-KIINRLE 70
Query: 261 RKVYLALNKPKG 296
K+YL + KP+G
Sbjct: 71 DKIYLLMYKPRG 82
[58][TOP]
>UniRef100_C2AWN4 Pseudouridine synthase n=1 Tax=Veillonella parvula DSM 2008
RepID=C2AWN4_9FIRM
Length = 242
Score = 71.6 bits (174), Expect = 3e-11
Identities = 38/72 (52%), Positives = 46/72 (63%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A+ G+ASRR EELI EGKV VNG K++P KD + VNG L + +P
Sbjct: 2 ERLQKYIASCGIASRRKAEELITEGKVQVNGRKVTELGVKINPQKDKVKVNGQLLAQEKP 61
Query: 261 RKVYLALNKPKG 296
VY LNKPKG
Sbjct: 62 --VYYLLNKPKG 71
[59][TOP]
>UniRef100_C2ADP6 Pseudouridine synthase n=1 Tax=Thermomonospora curvata DSM 43183
RepID=C2ADP6_THECU
Length = 250
Score = 71.6 bits (174), Expect = 3e-11
Identities = 39/73 (53%), Positives = 49/73 (67%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
G RL KVLA +G+ SRR CE LI EG+V V+G V + +VDPAK I+V+G R+ R
Sbjct: 13 GVRLQKVLAEAGLGSRRQCERLIVEGRVKVDGEVVSWLGARVDPAKAVIHVDGLRVETR- 71
Query: 258 PRKVYLALNKPKG 296
P Y ALNKP+G
Sbjct: 72 PEMRYYALNKPRG 84
[60][TOP]
>UniRef100_B1SA95 Pseudouridine synthase n=1 Tax=Bifidobacterium dentium ATCC 27678
RepID=B1SA95_9BIFI
Length = 257
Score = 71.6 bits (174), Expect = 3e-11
Identities = 40/92 (43%), Positives = 56/92 (60%)
Frame = +3
Query: 18 PPKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQT 197
P YS+AA+ N N G RL K+LA +G SRR CEE+I +G+V ++G + T
Sbjct: 2 PNAYSRAAKAHDNNN----EGIRLQKLLAQAGFGSRRKCEEIITDGRVEIDGELITELGT 57
Query: 198 KVDPAKDSIYVNGNRLPKRQPRKVYLALNKPK 293
+VDP + V+G+R+ + P V LALNKPK
Sbjct: 58 RVDPKHQEVRVDGSRV-RVNPNHVTLALNKPK 88
[61][TOP]
>UniRef100_UPI0001794CA6 hypothetical protein CLOSPO_03189 n=1 Tax=Clostridium sporogenes
ATCC 15579 RepID=UPI0001794CA6
Length = 236
Score = 71.2 bits (173), Expect = 3e-11
Identities = 37/72 (51%), Positives = 48/72 (66%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A+ GVASRR CE++I EG+V VNG TK+ KD I V+GN + K +
Sbjct: 3 ERLQKYMASCGVASRRKCEDIILEGRVEVNGIKIKEVGTKIISGKDIIKVDGN-IIKPEE 61
Query: 261 RKVYLALNKPKG 296
K+Y+ LNKPKG
Sbjct: 62 NKIYILLNKPKG 73
[62][TOP]
>UniRef100_Q1IJT7 Pseudouridine synthase n=1 Tax=Candidatus Koribacter versatilis
Ellin345 RepID=Q1IJT7_ACIBL
Length = 680
Score = 71.2 bits (173), Expect = 3e-11
Identities = 37/74 (50%), Positives = 50/74 (67%)
Frame = +3
Query: 75 AGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKR 254
+ ERL K++AA+G+ASRR EEL+ G+VTVNG V N +K DP D I V+G P +
Sbjct: 2 SSERLQKIIAAAGMASRRKAEELVTAGRVTVNGEVKNELGSKADPETDDIRVDGK--PLK 59
Query: 255 QPRKVYLALNKPKG 296
+ VY+ L+KPKG
Sbjct: 60 AEQLVYVLLHKPKG 73
[63][TOP]
>UniRef100_A1BDS4 Pseudouridine synthase n=1 Tax=Chlorobium phaeobacteroides DSM 266
RepID=A1BDS4_CHLPD
Length = 243
Score = 71.2 bits (173), Expect = 3e-11
Identities = 30/76 (39%), Positives = 52/76 (68%)
Frame = +3
Query: 66 KDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRL 245
+D G R+++ LA G+ASRR+ ++L+ +G+VTVNG + + P ++ P KD + V+G +
Sbjct: 5 EDEGGIRINRYLAMCGIASRRAADKLVADGRVTVNGKIADEPGLRILPFKDEVIVDGRKF 64
Query: 246 PKRQPRKVYLALNKPK 293
+ +KVY+ LNKP+
Sbjct: 65 VVPEAKKVYILLNKPR 80
[64][TOP]
>UniRef100_B8HGG0 Pseudouridine synthase n=1 Tax=Arthrobacter chlorophenolicus A6
RepID=B8HGG0_ARTCA
Length = 403
Score = 70.9 bits (172), Expect = 4e-11
Identities = 37/76 (48%), Positives = 51/76 (67%)
Frame = +3
Query: 69 DSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP 248
D+ G RL KV+A++GVASRR CEE+I EG+V V+G V ++DPA I+V+G R+
Sbjct: 159 DADGVRLQKVMASAGVASRRVCEEMIAEGRVEVDGQVVTELGVRIDPATAVIHVDGLRI- 217
Query: 249 KRQPRKVYLALNKPKG 296
+ VY+ NKPKG
Sbjct: 218 QLDENLVYMVFNKPKG 233
[65][TOP]
>UniRef100_B2GK25 Pseudouridine synthase n=1 Tax=Kocuria rhizophila DC2201
RepID=B2GK25_KOCRD
Length = 368
Score = 68.6 bits (166), Expect(2) = 5e-11
Identities = 34/76 (44%), Positives = 51/76 (67%)
Frame = +3
Query: 69 DSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP 248
D G RL K++A +GVASRR CEE+I +G+V+V+G + +VDPA +++V+G R+
Sbjct: 126 DENGVRLQKLMAQAGVASRRVCEEMIQDGRVSVDGEIVTELGVRVDPALQAVHVDGMRI- 184
Query: 249 KRQPRKVYLALNKPKG 296
+ + VY A NKP G
Sbjct: 185 QTDEKLVYYAFNKPAG 200
Score = 22.3 bits (46), Expect(2) = 5e-11
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 16 RRRSILRRHGGSTTRISRTPPV 81
RR S ++ HG R + PPV
Sbjct: 98 RRASAIKEHGPHRRRRPKNPPV 119
[66][TOP]
>UniRef100_C5CAK3 Pseudouridine synthase n=1 Tax=Micrococcus luteus NCTC 2665
RepID=C5CAK3_MICLC
Length = 318
Score = 70.5 bits (171), Expect = 6e-11
Identities = 40/86 (46%), Positives = 53/86 (61%)
Frame = +3
Query: 39 ARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKD 218
A+ + + D +GERL KVLAA+GVASRR E+LI EG+V V+G V P +VDPA
Sbjct: 67 AKAAHLDRIHDESGERLQKVLAAAGVASRRVSEDLIAEGRVEVDGVVVTEPGVRVDPATA 126
Query: 219 SIYVNGNRLPKRQPRKVYLALNKPKG 296
I V+G + + K Y NKP+G
Sbjct: 127 VIRVDGISV-QTDVTKQYFVFNKPRG 151
[67][TOP]
>UniRef100_B2TKZ1 Pseudouridine synthase n=1 Tax=Clostridium botulinum B str. Eklund
17B RepID=B2TKZ1_CLOBB
Length = 236
Score = 70.5 bits (171), Expect = 6e-11
Identities = 35/72 (48%), Positives = 48/72 (66%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A+ GVASRR CEE+I G+V VNG V T+V+P +D + G+ + K +
Sbjct: 3 ERLQKYMASCGVASRRKCEEIILNGEVKVNGVVITELGTRVNPVEDKVEYKGSLITKEE- 61
Query: 261 RKVYLALNKPKG 296
KVY+ LNKP+G
Sbjct: 62 NKVYIILNKPEG 73
[68][TOP]
>UniRef100_C9KIR7 Ribosomal large subunit pseudouridine synthase B n=1
Tax=Mitsuokella multacida DSM 20544 RepID=C9KIR7_9FIRM
Length = 250
Score = 70.5 bits (171), Expect = 6e-11
Identities = 35/72 (48%), Positives = 51/72 (70%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K+++ +G+ASRR+ E++I EG+V V+G V TKVDPA +I V+G ++ +
Sbjct: 5 ERLQKIISQAGIASRRAAEKMILEGRVRVDGQVVRELGTKVDPAAHTILVDGKKIAGEE- 63
Query: 261 RKVYLALNKPKG 296
+ VYL LNKPKG
Sbjct: 64 QHVYLLLNKPKG 75
[69][TOP]
>UniRef100_B9XS61 Pseudouridine synthase n=1 Tax=bacterium Ellin514
RepID=B9XS61_9BACT
Length = 235
Score = 70.5 bits (171), Expect = 6e-11
Identities = 38/71 (53%), Positives = 48/71 (67%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
RL K LA +GVASRR+ E +I G+V+VNG TKVDP DSI ++G P R R
Sbjct: 3 RLQKFLAEAGVASRRASERIILGGRVSVNGDTVRELGTKVDPIHDSIALDG--APLRLKR 60
Query: 264 KVYLALNKPKG 296
K+Y+ALNKP+G
Sbjct: 61 KLYVALNKPRG 71
[70][TOP]
>UniRef100_B5H2A5 Pseudouridine synthase n=1 Tax=Streptomyces clavuligerus ATCC 27064
RepID=B5H2A5_STRCL
Length = 376
Score = 70.5 bits (171), Expect = 6e-11
Identities = 39/80 (48%), Positives = 49/80 (61%)
Frame = +3
Query: 57 ENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNG 236
+ F + GERL KVLA +GV SRR+CEELI G+V VNGS+ +VDP D I V+G
Sbjct: 132 KTFGEQEGERLQKVLARAGVGSRRACEELIEAGRVEVNGSIVIEQGVRVDPENDEIKVDG 191
Query: 237 NRLPKRQPRKVYLALNKPKG 296
L ++ ALNKP G
Sbjct: 192 --LTVATQSYLFFALNKPAG 209
[71][TOP]
>UniRef100_UPI00019768BE pseudouridine synthase n=1 Tax=Bifidobacterium bifidum NCIMB 41171
RepID=UPI00019768BE
Length = 258
Score = 70.1 bits (170), Expect = 7e-11
Identities = 40/92 (43%), Positives = 56/92 (60%)
Frame = +3
Query: 18 PPKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQT 197
P YS+A + + N + G RL K+LA +G SRR CE++I +G+V V+G + T
Sbjct: 2 PNAYSRALKAHDDNN---NEGIRLQKILAQAGFGSRRKCEQMITDGRVEVDGELVTELGT 58
Query: 198 KVDPAKDSIYVNGNRLPKRQPRKVYLALNKPK 293
+VDP K I V+G+R+ P V LALNKPK
Sbjct: 59 RVDPKKQHIRVDGSRV-HLNPNHVTLALNKPK 89
[72][TOP]
>UniRef100_Q895F7 Pseudouridine synthase n=1 Tax=Clostridium tetani
RepID=Q895F7_CLOTE
Length = 234
Score = 70.1 bits (170), Expect = 7e-11
Identities = 35/72 (48%), Positives = 47/72 (65%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A+ GV SRR CE++I G+V VNG KVDP KD + ++ NR+ K++
Sbjct: 2 ERLQKYMASCGVDSRRKCEDIILNGRVKVNGESIKELGVKVDPEKDIVTID-NRIIKKEE 60
Query: 261 RKVYLALNKPKG 296
K Y+ALNKP G
Sbjct: 61 NKKYIALNKPTG 72
[73][TOP]
>UniRef100_C8XHP1 Pseudouridine synthase n=1 Tax=Nakamurella multipartita DSM 44233
RepID=C8XHP1_9ACTO
Length = 249
Score = 70.1 bits (170), Expect = 7e-11
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
G RL KVLA++GVASRR EELI +G+V V+G V T++DP ++V+GNR+ R
Sbjct: 11 GVRLQKVLASAGVASRRKAEELIRDGRVKVDGIVVREMGTRIDPENAVVHVDGNRITTRT 70
Query: 258 PRKVYLALNKPKG 296
VYLALNK +G
Sbjct: 71 D-LVYLALNKERG 82
[74][TOP]
>UniRef100_C0W3E8 Pseudouridine synthase n=1 Tax=Actinomyces urogenitalis DSM 15434
RepID=C0W3E8_9ACTO
Length = 325
Score = 70.1 bits (170), Expect = 7e-11
Identities = 36/75 (48%), Positives = 52/75 (69%)
Frame = +3
Query: 72 SAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPK 251
+ GERL KVLA +GVASRR+CEE+I G+V+V+G V P +VDP++ I V+G+R+
Sbjct: 73 ATGERLQKVLAHAGVASRRACEEIIAAGRVSVDGVVVTEPGVRVDPSRQEIRVDGSRV-L 131
Query: 252 RQPRKVYLALNKPKG 296
P + + L+KP G
Sbjct: 132 TDPDVITVLLHKPAG 146
[75][TOP]
>UniRef100_B1R1E9 Pseudouridine synthase n=2 Tax=Clostridium butyricum
RepID=B1R1E9_CLOBU
Length = 238
Score = 70.1 bits (170), Expect = 7e-11
Identities = 36/71 (50%), Positives = 49/71 (69%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A+ G+ASRR CEELI GKV VNG++ KV+P KD + +G R+ ++
Sbjct: 3 ERLQKYMASCGIASRRKCEELILLGKVKVNGNIIEELGFKVNPLKDIVEYDG-RVITKEE 61
Query: 261 RKVYLALNKPK 293
RKVY+ LNKP+
Sbjct: 62 RKVYIMLNKPE 72
[76][TOP]
>UniRef100_B3QLK5 Pseudouridine synthase n=1 Tax=Chlorobaculum parvum NCIB 8327
RepID=B3QLK5_CHLP8
Length = 247
Score = 69.7 bits (169), Expect = 1e-10
Identities = 29/70 (41%), Positives = 48/70 (68%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
R++K LA G+ASRR+ ++L+ EG+V VNG V + P ++DP D + V+G + + + +
Sbjct: 11 RINKYLAMCGIASRRAADQLVLEGRVMVNGHVADQPGLQIDPKHDEVIVDGRHMAQPEHK 70
Query: 264 KVYLALNKPK 293
KVY+ NKP+
Sbjct: 71 KVYILFNKPR 80
[77][TOP]
>UniRef100_A4XKB0 Pseudouridine synthase n=1 Tax=Caldicellulosiruptor saccharolyticus
DSM 8903 RepID=A4XKB0_CALS8
Length = 237
Score = 69.7 bits (169), Expect = 1e-10
Identities = 36/71 (50%), Positives = 46/71 (64%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
RL K +A GVASRR CEE+I +G+V VNG KVDP KD + V+G +L Q +
Sbjct: 3 RLQKFMADCGVASRRKCEEIILQGRVKVNGRTITELGFKVDPQKDKVLVDGKKLVPVQ-K 61
Query: 264 KVYLALNKPKG 296
K+Y+ LNKP G
Sbjct: 62 KIYIMLNKPFG 72
[78][TOP]
>UniRef100_UPI000185CACC ribosomal large subunit pseudouridine synthase B n=1
Tax=Propionibacterium acnes SK137 RepID=UPI000185CACC
Length = 245
Score = 69.3 bits (168), Expect = 1e-10
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
G RL KVLA +G+ASRR+ E++I G+V VNG + +VDP +D I V+G+R+P +
Sbjct: 6 GIRLQKVLAQAGLASRRAAEDMIAAGRVEVNGELIVEQGRRVDPERDEIRVDGSRIPTAR 65
Query: 258 PRKVYLALNKPKG 296
R VY LNKP+G
Sbjct: 66 -RHVYYVLNKPQG 77
[79][TOP]
>UniRef100_Q6AQ24 Related to ribosomal large subunit pseudouridine synthase B n=1
Tax=Desulfotalea psychrophila RepID=Q6AQ24_DESPS
Length = 229
Score = 69.3 bits (168), Expect = 1e-10
Identities = 37/71 (52%), Positives = 47/71 (66%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
RL K LAASG+ SRR E+LI +G+VT+NG TK+ P D I V+G +L K + +
Sbjct: 101 RLQKFLAASGICSRRKAEQLILDGRVTLNGETVLILGTKITPDIDKITVDG-KLVKEEEQ 159
Query: 264 KVYLALNKPKG 296
KVY LNKPKG
Sbjct: 160 KVYYLLNKPKG 170
[80][TOP]
>UniRef100_Q6A7X9 Pseudouridine synthase n=1 Tax=Propionibacterium acnes
RepID=Q6A7X9_PROAC
Length = 245
Score = 69.3 bits (168), Expect = 1e-10
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
G RL KVLA +G+ASRR+ E++I G+V VNG + +VDP +D I V+G+R+P +
Sbjct: 6 GIRLQKVLAQAGLASRRAAEDMIAAGRVEVNGELIVEQGRRVDPERDEIRVDGSRIPTAR 65
Query: 258 PRKVYLALNKPKG 296
R VY LNKP+G
Sbjct: 66 -RHVYYVLNKPQG 77
[81][TOP]
>UniRef100_C1F236 Pseudouridine synthase n=1 Tax=Acidobacterium capsulatum ATCC 51196
RepID=C1F236_ACIC5
Length = 406
Score = 69.3 bits (168), Expect = 1e-10
Identities = 45/96 (46%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +3
Query: 12 SPPPKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTP 191
S P+ KA + E + GERL K+LA++GVASRR EELI G+V VNG V
Sbjct: 3 SRKPRTEKAQQAAPQE--EPRGGERLQKILASAGVASRRKAEELILAGRVQVNGQVVTEM 60
Query: 192 QTKVDPAKDSIYVNGNRLPKRQPRKV-YLALNKPKG 296
K D A D I V+G L + P K+ Y LNKPKG
Sbjct: 61 GFKADAASDHIRVDGKLL--QGPEKLRYFMLNKPKG 94
[82][TOP]
>UniRef100_B1KSB6 Pseudouridine synthase n=1 Tax=Clostridium botulinum A3 str. Loch
Maree RepID=B1KSB6_CLOBM
Length = 236
Score = 69.3 bits (168), Expect = 1e-10
Identities = 36/72 (50%), Positives = 48/72 (66%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A+ GVASRR CE++I EG+V VNG TK+ KD I V+GN + + +
Sbjct: 3 ERLQKYMASCGVASRRKCEDIILEGRVEVNGIKIKELGTKIISGKDIIKVDGN-IIEPEE 61
Query: 261 RKVYLALNKPKG 296
K+Y+ LNKPKG
Sbjct: 62 NKIYILLNKPKG 73
[83][TOP]
>UniRef100_B1IM81 Pseudouridine synthase n=1 Tax=Clostridium botulinum B1 str. Okra
RepID=B1IM81_CLOBK
Length = 236
Score = 69.3 bits (168), Expect = 1e-10
Identities = 36/72 (50%), Positives = 48/72 (66%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A+ GVASRR CE++I EG+V VNG TK+ KD I V+GN + + +
Sbjct: 3 ERLQKYMASCGVASRRKCEDIILEGRVEVNGIKIKELGTKIISGKDIIKVDGN-IIEPEE 61
Query: 261 RKVYLALNKPKG 296
K+Y+ LNKPKG
Sbjct: 62 NKIYILLNKPKG 73
[84][TOP]
>UniRef100_A7GE58 Pseudouridine synthase n=1 Tax=Clostridium botulinum F str.
Langeland RepID=A7GE58_CLOBL
Length = 236
Score = 69.3 bits (168), Expect = 1e-10
Identities = 36/72 (50%), Positives = 48/72 (66%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A+ GVASRR CE++I EG+V VNG TK+ KD I V+GN + + +
Sbjct: 3 ERLQKYMASCGVASRRKCEDIILEGRVEVNGIKIKELGTKIISGKDIIKVDGN-IIEPEE 61
Query: 261 RKVYLALNKPKG 296
K+Y+ LNKPKG
Sbjct: 62 NKIYILLNKPKG 73
[85][TOP]
>UniRef100_A5I2T5 Pseudouridine synthase n=2 Tax=Clostridium botulinum A
RepID=A5I2T5_CLOBH
Length = 236
Score = 69.3 bits (168), Expect = 1e-10
Identities = 36/72 (50%), Positives = 48/72 (66%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A+ GVASRR CE++I EG+V VNG TK+ KD I V+GN + + +
Sbjct: 3 ERLQKYMASCGVASRRKCEDIILEGRVEVNGIKIKELGTKIISGKDIIKVDGN-IIEPEE 61
Query: 261 RKVYLALNKPKG 296
K+Y+ LNKPKG
Sbjct: 62 NKIYILLNKPKG 73
[86][TOP]
>UniRef100_A0JV58 Pseudouridine synthase n=1 Tax=Arthrobacter sp. FB24
RepID=A0JV58_ARTS2
Length = 406
Score = 69.3 bits (168), Expect = 1e-10
Identities = 37/76 (48%), Positives = 50/76 (65%)
Frame = +3
Query: 69 DSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP 248
D+ G RL KV+A++GVASRR CEE+I EG+V V+G V +VDP I+V+G R+
Sbjct: 164 DADGIRLQKVMASAGVASRRVCEEMISEGRVEVDGKVVTELGVRVDPKTAVIHVDGLRI- 222
Query: 249 KRQPRKVYLALNKPKG 296
+ VY+ NKPKG
Sbjct: 223 QLDENMVYMVFNKPKG 238
[87][TOP]
>UniRef100_UPI000050FCB0 COG1187: 16S rRNA uridine-516 pseudouridylate synthase and related
pseudouridylate synthases n=1 Tax=Brevibacterium linens
BL2 RepID=UPI000050FCB0
Length = 238
Score = 68.9 bits (167), Expect = 2e-10
Identities = 33/71 (46%), Positives = 49/71 (69%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
RL K+LA +G+ SRR+CE+LI +G+V V+GS+ T++D ++YV+ R+ Q +
Sbjct: 2 RLQKILAEAGLGSRRACEQLILDGRVEVDGSIVTELGTRIDTETQAVYVDAVRI-STQTQ 60
Query: 264 KVYLALNKPKG 296
KVYL LNKP G
Sbjct: 61 KVYLVLNKPAG 71
[88][TOP]
>UniRef100_C5C6J9 Pseudouridine synthase n=1 Tax=Beutenbergia cavernae DSM 12333
RepID=C5C6J9_BEUC1
Length = 245
Score = 68.9 bits (167), Expect = 2e-10
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
G RL KVLA +G+ SRR+CE+LI G+V+V+G V T+VDP I+V+G RL +
Sbjct: 7 GVRLQKVLAGAGLGSRRACEDLISAGRVSVDGEVVRELGTRVDPTAAVIHVDGLRL-QLD 65
Query: 258 PRKVYLALNKPKG 296
P V LALNKP+G
Sbjct: 66 PGVVTLALNKPRG 78
[89][TOP]
>UniRef100_B7GR26 Pseudouridine synthase n=1 Tax=Bifidobacterium longum subsp.
infantis ATCC 15697 RepID=B7GR26_BIFLI
Length = 256
Score = 68.9 bits (167), Expect = 2e-10
Identities = 40/92 (43%), Positives = 56/92 (60%)
Frame = +3
Query: 18 PPKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQT 197
P YS+AA+ DS RL K+LA +G SRR CE++I EG+V V+G + T
Sbjct: 2 PNAYSRAAKAQ-----DDSNSIRLQKLLAQAGFGSRRKCEDMITEGRVEVDGELVTELGT 56
Query: 198 KVDPAKDSIYVNGNRLPKRQPRKVYLALNKPK 293
+VDP K + V+G+R+ + P V LALNKP+
Sbjct: 57 RVDPHKQQVRVDGSRV-RVNPNHVTLALNKPR 87
[90][TOP]
>UniRef100_B2V0M9 Pseudouridine synthase n=1 Tax=Clostridium botulinum E3 str. Alaska
E43 RepID=B2V0M9_CLOBA
Length = 236
Score = 68.9 bits (167), Expect = 2e-10
Identities = 35/72 (48%), Positives = 48/72 (66%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A+ G+ASRR CEE+I G+V VNG V T+V+P +D + G L K++
Sbjct: 3 ERLQKYMASCGLASRRKCEEMILSGEVKVNGVVVTELGTRVNPVEDKVEYKG-CLIKKEE 61
Query: 261 RKVYLALNKPKG 296
KVY+ LNKP+G
Sbjct: 62 NKVYIILNKPEG 73
[91][TOP]
>UniRef100_C5UV79 Pseudouridine synthase n=1 Tax=Clostridium botulinum E1 str. 'BoNT
E Beluga' RepID=C5UV79_CLOBO
Length = 236
Score = 68.9 bits (167), Expect = 2e-10
Identities = 35/72 (48%), Positives = 48/72 (66%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A+ G+ASRR CEE+I G+V VNG V T+V+P +D + G L K++
Sbjct: 3 ERLQKYMASCGLASRRKCEEIILSGEVKVNGVVVTELGTRVNPVEDKVEYKG-CLIKKEE 61
Query: 261 RKVYLALNKPKG 296
KVY+ LNKP+G
Sbjct: 62 NKVYIILNKPEG 73
[92][TOP]
>UniRef100_B3DRY9 Pseudouridine synthase n=4 Tax=Bifidobacterium longum
RepID=B3DRY9_BIFLD
Length = 256
Score = 68.9 bits (167), Expect = 2e-10
Identities = 40/92 (43%), Positives = 56/92 (60%)
Frame = +3
Query: 18 PPKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQT 197
P YS+AA+ DS RL K+LA +G SRR CE++I EG+V V+G + T
Sbjct: 2 PNAYSRAAKAQ-----DDSNSIRLQKLLAQAGFGSRRKCEDMITEGRVEVDGELVTELGT 56
Query: 198 KVDPAKDSIYVNGNRLPKRQPRKVYLALNKPK 293
+VDP K + V+G+R+ + P V LALNKP+
Sbjct: 57 RVDPHKQQVRVDGSRV-RVNPNHVTLALNKPR 87
[93][TOP]
>UniRef100_UPI00018A07DF hypothetical protein BIFGAL_01652 n=1 Tax=Bifidobacterium gallicum
DSM 20093 RepID=UPI00018A07DF
Length = 258
Score = 68.6 bits (166), Expect = 2e-10
Identities = 38/92 (41%), Positives = 57/92 (61%)
Frame = +3
Query: 18 PPKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQT 197
P YS+A + + N + G RL K+LA +G SRR CEE+I +G+V V+G + +
Sbjct: 2 PHAYSQAKKAHESGN---NEGIRLQKILAQAGFGSRRKCEEMILDGRVEVDGELVTELGS 58
Query: 198 KVDPAKDSIYVNGNRLPKRQPRKVYLALNKPK 293
+VDP + + V+G+R+ + R V LALNKPK
Sbjct: 59 RVDPKRQEVRVDGSRI-RLNNRHVTLALNKPK 89
[94][TOP]
>UniRef100_Q5WGY9 Pseudouridine synthase n=1 Tax=Bacillus clausii KSM-K16
RepID=Q5WGY9_BACSK
Length = 242
Score = 68.6 bits (166), Expect = 2e-10
Identities = 38/72 (52%), Positives = 47/72 (65%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +GVASRR EE I EG+V VNG TKV+P+KD++ V+G L K +P
Sbjct: 2 ERLQKVIAKAGVASRRKAEEYIVEGRVKVNGETVTELGTKVNPSKDAVEVDGVPLDKEEP 61
Query: 261 RKVYLALNKPKG 296
VY L KP G
Sbjct: 62 --VYHLLYKPTG 71
[95][TOP]
>UniRef100_C4LIG2 Pseudouridine synthase n=1 Tax=Corynebacterium kroppenstedtii DSM
44385 RepID=C4LIG2_CORK4
Length = 278
Score = 68.6 bits (166), Expect = 2e-10
Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Frame = +3
Query: 21 PKYSKAARRFYNENFKDSA-------GERLSKVLAASGVASRRSCEELIFEGKVTVNGSV 179
P+Y A+ +++ K ++ G RL KVLAA+GVASRR E+LI EG+V VNG +
Sbjct: 11 PEYVPKAKPARHQHVKGTSPAHHSGEGIRLQKVLAAAGVASRRMSEKLIDEGRVEVNGDI 70
Query: 180 CNTPQTKVDPAKDSIYVNGNRLPKRQPRKVYLALNKPKG 296
+VDP D I V+G+R+ + + Y ALNKP+G
Sbjct: 71 VTRQGVRVDPDYDVIRVDGSRVVVDESMQ-YFALNKPRG 108
[96][TOP]
>UniRef100_C1DTU8 Pseudouridine synthase n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1
RepID=C1DTU8_SULAA
Length = 247
Score = 68.6 bits (166), Expect = 2e-10
Identities = 35/72 (48%), Positives = 46/72 (63%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL+K +A SG+ SRR +ELI EGKV VNG K+DP KD + V G ++ K
Sbjct: 2 ERLNKYIAKSGICSRRKADELILEGKVKVNGKTVKNLGLKIDPKKDVVEVEG-KIVKPTE 60
Query: 261 RKVYLALNKPKG 296
+K+YLA+ KP G
Sbjct: 61 KKIYLAIYKPVG 72
[97][TOP]
>UniRef100_B0B8U9 Pseudouridine synthase n=1 Tax=Chlamydia trachomatis 434/Bu
RepID=B0B8U9_CHLT2
Length = 241
Score = 68.6 bits (166), Expect = 2e-10
Identities = 36/71 (50%), Positives = 46/71 (64%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
RL+K LA++GVASRR C+E+IF G VTVNG V P VD DS+ V G R+ +
Sbjct: 5 RLNKFLASAGVASRRKCDEIIFAGSVTVNGRVATGPFVTVDEEFDSVEVGGQRIGAE--K 62
Query: 264 KVYLALNKPKG 296
KVY ++KP G
Sbjct: 63 KVYFMVHKPLG 73
[98][TOP]
>UniRef100_A0LU98 Pseudouridine synthase n=1 Tax=Acidothermus cellulolyticus 11B
RepID=A0LU98_ACIC1
Length = 269
Score = 68.6 bits (166), Expect = 2e-10
Identities = 45/100 (45%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Frame = +3
Query: 9 SSPPPK----YSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGS 176
SSP P+ +S+AA D RL KVLAA+GV SRR+CEELI G+V V+G
Sbjct: 6 SSPGPRGLAPHSRAAALSLPAG--DDGAVRLQKVLAAAGVGSRRACEELIAAGRVEVDGV 63
Query: 177 VCNTPQTKVDPAKDSIYVNGNRLPKRQPRKVYLALNKPKG 296
+VDP I V+G R+P P Y ALNKP+G
Sbjct: 64 PVTRLGVRVDPQTAVIRVDGKRIPPATP-FAYFALNKPRG 102
[99][TOP]
>UniRef100_Q7X1A1 Lfe193p2 (Fragment) n=1 Tax=Leptospirillum ferrooxidans
RepID=Q7X1A1_9BACT
Length = 164
Score = 68.6 bits (166), Expect = 2e-10
Identities = 37/71 (52%), Positives = 46/71 (64%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
RL K+LA G+ SRR+ EELI G VTVNG V TP TKVDP +D + V G LP+ +
Sbjct: 29 RLQKLLAHRGITSRRNAEELIAGGLVTVNGKVETTPGTKVDPQRDVVVVEGRMLPREKET 88
Query: 264 KVYLALNKPKG 296
++L KPKG
Sbjct: 89 FLFL-FYKPKG 98
[100][TOP]
>UniRef100_A6EJI4 Pseudouridine synthase n=1 Tax=Pedobacter sp. BAL39
RepID=A6EJI4_9SPHI
Length = 463
Score = 68.6 bits (166), Expect = 2e-10
Identities = 39/94 (41%), Positives = 55/94 (58%)
Frame = +3
Query: 12 SPPPKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTP 191
+P + + R N KD RL++ +A SG+ SRR +ELI G V+VNG V +
Sbjct: 205 TPRDESNTVMRSRKNVAVKDDGLIRLNRYIANSGICSRRKADELIAAGVVSVNGEVVSEL 264
Query: 192 QTKVDPAKDSIYVNGNRLPKRQPRKVYLALNKPK 293
K+DPAKD + NG L ++ +KVY+ LNKPK
Sbjct: 265 GHKIDPAKDQVRYNGELL--KREKKVYVLLNKPK 296
[101][TOP]
>UniRef100_Q8DL42 Pseudouridine synthase n=1 Tax=Thermosynechococcus elongatus BP-1
RepID=Q8DL42_THEEB
Length = 250
Score = 68.2 bits (165), Expect = 3e-10
Identities = 41/73 (56%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRL-PKRQ 257
ERL KVLA GVASRR E LI G+V VNG KVDPA+D I G RL P R
Sbjct: 4 ERLQKVLAHWGVASRRHAETLIRSGQVFVNGQRAKLGD-KVDPARDRIEYKGERLNPPRP 62
Query: 258 PRKVYLALNKPKG 296
P+++YL L+KPKG
Sbjct: 63 PQRLYLLLHKPKG 75
[102][TOP]
>UniRef100_Q5L4Y4 Pseudouridine synthase n=1 Tax=Chlamydophila abortus
RepID=Q5L4Y4_CHLAB
Length = 232
Score = 68.2 bits (165), Expect = 3e-10
Identities = 36/71 (50%), Positives = 47/71 (66%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
RL+K LA+SGVASRR C+E+IF G VTVNG V P VD D++ V+G R+ +
Sbjct: 5 RLNKFLASSGVASRRKCDEIIFSGHVTVNGRVAPGPFVLVDEETDTVKVDGRRV--GMTK 62
Query: 264 KVYLALNKPKG 296
KVY ++KP G
Sbjct: 63 KVYFMVHKPLG 73
[103][TOP]
>UniRef100_Q256A5 Pseudouridine synthase n=1 Tax=Chlamydophila felis Fe/C-56
RepID=Q256A5_CHLFF
Length = 239
Score = 68.2 bits (165), Expect = 3e-10
Identities = 36/71 (50%), Positives = 47/71 (66%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
RL+K LA+SGVASRR C+E+IF G VTVNG V P VD D++ V+G R+ +
Sbjct: 12 RLNKFLASSGVASRRKCDEIIFSGHVTVNGRVAPGPFVLVDEETDTVKVDGRRV--GMTK 69
Query: 264 KVYLALNKPKG 296
KVY ++KP G
Sbjct: 70 KVYFMVHKPLG 80
[104][TOP]
>UniRef100_B0RHF4 Pseudouridine synthase n=1 Tax=Clavibacter michiganensis subsp.
sepedonicus RepID=B0RHF4_CLAMS
Length = 291
Score = 68.2 bits (165), Expect = 3e-10
Identities = 36/74 (48%), Positives = 48/74 (64%)
Frame = +3
Query: 75 AGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKR 254
AG RL KV+AA+GVASRR CE++I G+VTVNG P ++DP D + V+ ++ +
Sbjct: 23 AGVRLQKVMAAAGVASRRVCEDMIAAGRVTVNGETVTEPGRRIDPDVDEVAVD-DQAVQL 81
Query: 255 QPRKVYLALNKPKG 296
K YL LNKP G
Sbjct: 82 DTSKRYLMLNKPVG 95
[105][TOP]
>UniRef100_A5CSG9 Pseudouridine synthase n=1 Tax=Clavibacter michiganensis subsp.
michiganensis NCPPB 382 RepID=A5CSG9_CLAM3
Length = 286
Score = 68.2 bits (165), Expect = 3e-10
Identities = 36/73 (49%), Positives = 48/73 (65%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
G RL KV+AA+GVASRR CE++I G+VTVNG V P ++DP D + V+ ++ +
Sbjct: 19 GVRLQKVMAAAGVASRRVCEDMIAAGRVTVNGEVVTEPGRRIDPDVDEVAVD-DQAVQLD 77
Query: 258 PRKVYLALNKPKG 296
K YL LNKP G
Sbjct: 78 TSKRYLMLNKPVG 90
[106][TOP]
>UniRef100_Q47QM5 Pseudouridine synthase n=1 Tax=Thermobifida fusca YX
RepID=Q47QM5_THEFY
Length = 375
Score = 67.8 bits (164), Expect = 4e-10
Identities = 37/73 (50%), Positives = 48/73 (65%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
G RL K LA +GVASRR+CEELI G+V+V+G + +VDP K I V+G R+ Q
Sbjct: 134 GIRLQKALAQAGVASRRACEELIAAGRVSVDGQIVRRFGARVDPEKSEIRVDGMRVVTSQ 193
Query: 258 PRKVYLALNKPKG 296
+ Y ALNKP+G
Sbjct: 194 NLR-YYALNKPRG 205
[107][TOP]
>UniRef100_C3KX48 Pseudouridine synthase n=1 Tax=Clostridium botulinum Ba4 str. 657
RepID=C3KX48_CLOB6
Length = 236
Score = 67.8 bits (164), Expect = 4e-10
Identities = 35/72 (48%), Positives = 48/72 (66%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A+ GVASRR CE++I EG+V VNG TK+ +D I V+GN + + +
Sbjct: 3 ERLQKYMASCGVASRRKCEDIILEGRVEVNGIKIKELGTKIISGEDIIKVDGN-IIEPEE 61
Query: 261 RKVYLALNKPKG 296
K+Y+ LNKPKG
Sbjct: 62 NKIYILLNKPKG 73
[108][TOP]
>UniRef100_B9MJY5 Pseudouridine synthase n=1 Tax=Anaerocellum thermophilum DSM 6725
RepID=B9MJY5_ANATD
Length = 230
Score = 67.8 bits (164), Expect = 4e-10
Identities = 35/66 (53%), Positives = 44/66 (66%)
Frame = +3
Query: 99 LAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPRKVYLA 278
+A GVASRR CEE+I +G+V VNG N KVDP KD + V+G R+ Q +KVY+
Sbjct: 1 MAQCGVASRRKCEEIILQGRVKVNGKTVNQLGFKVDPEKDVVEVDGKRI-SLQMQKVYIM 59
Query: 279 LNKPKG 296
LNKP G
Sbjct: 60 LNKPFG 65
[109][TOP]
>UniRef100_A6WCP5 Pseudouridine synthase n=1 Tax=Kineococcus radiotolerans SRS30216
RepID=A6WCP5_KINRD
Length = 322
Score = 67.8 bits (164), Expect = 4e-10
Identities = 36/94 (38%), Positives = 52/94 (55%)
Frame = +3
Query: 15 PPPKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQ 194
PP + + + D G RL KVLA +G SRR+CEE+I G+VTV+G V
Sbjct: 63 PPRRGPGPIKAHPGTDVHDPEGVRLQKVLAQAGAGSRRACEEMIAAGRVTVDGEVVTELG 122
Query: 195 TKVDPAKDSIYVNGNRLPKRQPRKVYLALNKPKG 296
++DP + ++V+G R VY+ +NKPKG
Sbjct: 123 VRIDPTRQVVHVDGMRF-SIDDELVYIMVNKPKG 155
[110][TOP]
>UniRef100_A0PSX4 Pseudouridine synthase n=2 Tax=Mycobacterium RepID=A0PSX4_MYCUA
Length = 253
Score = 67.8 bits (164), Expect = 4e-10
Identities = 38/80 (47%), Positives = 52/80 (65%)
Frame = +3
Query: 57 ENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNG 236
E+F+ G RL KVL+ +G+ASRR+ E+LI +G+V V+G V T+VDP I V+G
Sbjct: 5 EDFEQERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDG 64
Query: 237 NRLPKRQPRKVYLALNKPKG 296
R+ VYLALNKP+G
Sbjct: 65 VRV-ILDDSLVYLALNKPRG 83
[111][TOP]
>UniRef100_C7MCQ3 Pseudouridine synthase family protein n=1 Tax=Brachybacterium
faecium DSM 4810 RepID=C7MCQ3_BRAFD
Length = 306
Score = 67.8 bits (164), Expect = 4e-10
Identities = 35/73 (47%), Positives = 48/73 (65%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
GERL KVLA +G SRR+CE LI G+V V+G+V ++DPA ++V+G RL +
Sbjct: 66 GERLQKVLARAGFGSRRACETLISTGRVRVDGAVVQEQGVRIDPAAQVVHVDGRRL-QLD 124
Query: 258 PRKVYLALNKPKG 296
K+ L LNKP+G
Sbjct: 125 ETKLTLVLNKPRG 137
[112][TOP]
>UniRef100_C4PNN4 Pseudouridine synthase n=4 Tax=Chlamydia trachomatis
RepID=C4PNN4_CHLTZ
Length = 241
Score = 67.8 bits (164), Expect = 4e-10
Identities = 36/71 (50%), Positives = 46/71 (64%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
RL+K LA++GVASRR C+E+IF G VTVNG V P VD DS+ V G R+ +
Sbjct: 5 RLNKFLASAGVASRRKCDEIIFAGSVTVNGRVAAGPFVTVDEEFDSVEVGGQRIGAE--K 62
Query: 264 KVYLALNKPKG 296
KVY ++KP G
Sbjct: 63 KVYFMVHKPLG 73
[113][TOP]
>UniRef100_B8E103 Pseudouridine synthase n=1 Tax=Dictyoglomus turgidum DSM 6724
RepID=B8E103_DICTD
Length = 241
Score = 67.4 bits (163), Expect = 5e-10
Identities = 37/72 (51%), Positives = 49/72 (68%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K ++ SGV SRR EELI EG+V VNG V T K+DP KD + V+ N++ K +
Sbjct: 3 ERLQKFISRSGVTSRRKAEELILEGRVKVNGKVIRTLGVKIDPEKDVVEVD-NKIIKPE- 60
Query: 261 RKVYLALNKPKG 296
+K+Y+AL KP G
Sbjct: 61 KKLYIALYKPVG 72
[114][TOP]
>UniRef100_B3EFR7 Pseudouridine synthase n=1 Tax=Chlorobium limicola DSM 245
RepID=B3EFR7_CHLL2
Length = 252
Score = 67.4 bits (163), Expect = 5e-10
Identities = 31/70 (44%), Positives = 48/70 (68%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
R+++ LA GVASRR+ ++L+ G+V +NGS+ P KVDP+ D + V+G+ L + +
Sbjct: 15 RINRYLAMCGVASRRASDQLVEAGRVMINGSIILEPGLKVDPSVDEVIVDGSMLALPEGK 74
Query: 264 KVYLALNKPK 293
KVY+ NKPK
Sbjct: 75 KVYILFNKPK 84
[115][TOP]
>UniRef100_A1R5C3 Pseudouridine synthase n=1 Tax=Arthrobacter aurescens TC1
RepID=A1R5C3_ARTAT
Length = 404
Score = 67.4 bits (163), Expect = 5e-10
Identities = 37/76 (48%), Positives = 48/76 (63%)
Frame = +3
Query: 69 DSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP 248
D G RL KV+A +GVASRR CEE+I EG+V V+G V +VDP I+V+G R+
Sbjct: 160 DVDGVRLQKVMAQAGVASRRVCEEMILEGRVEVDGVVTTELGMRVDPTSAVIHVDGIRI- 218
Query: 249 KRQPRKVYLALNKPKG 296
+ VY+ NKPKG
Sbjct: 219 QLDETLVYMVFNKPKG 234
[116][TOP]
>UniRef100_C8WXC0 Pseudouridine synthase n=1 Tax=Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446 RepID=C8WXC0_ALIAC
Length = 273
Score = 67.4 bits (163), Expect = 5e-10
Identities = 37/70 (52%), Positives = 46/70 (65%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KVLA +GVASRR CEELI G+V+V+G + KVDP++ I V+G + QP
Sbjct: 2 ERLQKVLAHAGVASRRKCEELILAGRVSVDGEIVTQLGAKVDPSRQRIAVDGVPIELEQP 61
Query: 261 RKVYLALNKP 290
V L LNKP
Sbjct: 62 --VVLVLNKP 69
[117][TOP]
>UniRef100_Q4JVW6 Pseudouridine synthase n=2 Tax=Corynebacterium jeikeium
RepID=Q4JVW6_CORJK
Length = 290
Score = 67.4 bits (163), Expect = 5e-10
Identities = 38/89 (42%), Positives = 54/89 (60%)
Frame = +3
Query: 30 SKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDP 209
++ A N+ + A RL KVLA++GVASRR E+LI G+V VNG V T++DP
Sbjct: 33 AQEAEAALNKPESEKAQVRLQKVLASAGVASRRMSEKLIAAGRVEVNGEVVVKMGTRIDP 92
Query: 210 AKDSIYVNGNRLPKRQPRKVYLALNKPKG 296
+ D + V+G R+ + VY LNKP+G
Sbjct: 93 SVDIVRVDGERVQVNE-EMVYFVLNKPRG 120
[118][TOP]
>UniRef100_C6P809 Pseudouridine synthase n=1 Tax=Thermoanaerobacterium
thermosaccharolyticum DSM 571 RepID=C6P809_CLOTS
Length = 235
Score = 67.4 bits (163), Expect = 5e-10
Identities = 34/72 (47%), Positives = 45/72 (62%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K LA +ASRR CE+LI +GK+ VNG+V K+DP KD + +G + K Q
Sbjct: 2 ERLQKYLAECSIASRRKCEQLILDGKIKVNGTVIKNLGIKIDPDKDIVEYDGRVVAKVQ- 60
Query: 261 RKVYLALNKPKG 296
+Y+ LNKP G
Sbjct: 61 HNIYIMLNKPTG 72
[119][TOP]
>UniRef100_C0UTW6 Pseudouridine synthase n=1 Tax=Thermobaculum terrenum ATCC BAA-798
RepID=C0UTW6_9BACT
Length = 253
Score = 67.4 bits (163), Expect = 5e-10
Identities = 36/71 (50%), Positives = 49/71 (69%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
RL K+LA GVASRR+ E +I EG+V+VNG + NTP P +D I V+G +L ++QP+
Sbjct: 6 RLHKLLAQMGVASRRAAERMIAEGRVSVNGRIVNTPGAMASP-EDEIRVDG-KLVRQQPK 63
Query: 264 KVYLALNKPKG 296
Y+ LNKP G
Sbjct: 64 MRYILLNKPAG 74
[120][TOP]
>UniRef100_B7DQW7 Pseudouridine synthase n=1 Tax=Alicyclobacillus acidocaldarius LAA1
RepID=B7DQW7_9BACL
Length = 273
Score = 67.4 bits (163), Expect = 5e-10
Identities = 37/70 (52%), Positives = 46/70 (65%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KVLA +GVASRR CEELI G+V+V+G + KVDP++ I V+G + QP
Sbjct: 2 ERLQKVLAHAGVASRRKCEELILAGRVSVDGEIVTQLGAKVDPSRQRIAVDGVPIELEQP 61
Query: 261 RKVYLALNKP 290
V L LNKP
Sbjct: 62 --VVLVLNKP 69
[121][TOP]
>UniRef100_C1FNV2 Pseudouridine synthase n=3 Tax=Clostridium botulinum
RepID=C1FNV2_CLOBJ
Length = 236
Score = 67.4 bits (163), Expect = 5e-10
Identities = 35/72 (48%), Positives = 48/72 (66%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A+ GVASRR CE++I EG+V VNG TK+ +D I V+GN + + +
Sbjct: 3 ERLQKYMASCGVASRRKCEDIILEGRVEVNGIRIKELGTKIISGEDIIKVDGN-IIEPEE 61
Query: 261 RKVYLALNKPKG 296
K+Y+ LNKPKG
Sbjct: 62 NKIYILLNKPKG 73
[122][TOP]
>UniRef100_UPI0001B45F5E ribosomal large subunit pseudouridine synthase B n=1
Tax=Mycobacterium intracellulare ATCC 13950
RepID=UPI0001B45F5E
Length = 247
Score = 67.0 bits (162), Expect = 6e-10
Identities = 37/76 (48%), Positives = 51/76 (67%)
Frame = +3
Query: 69 DSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP 248
++ G RL KVL+ +G+ASRR+ E+LI EG+V V+G V T+VDP I V+G R+
Sbjct: 3 EAEGIRLQKVLSQAGIASRRAAEKLIIEGRVEVDGQVVTELGTRVDPDVSVIRVDGARI- 61
Query: 249 KRQPRKVYLALNKPKG 296
+VYLALNKP+G
Sbjct: 62 VLDDSQVYLALNKPRG 77
[123][TOP]
>UniRef100_Q97I05 Pseudouridine synthase n=1 Tax=Clostridium acetobutylicum
RepID=Q97I05_CLOAB
Length = 236
Score = 67.0 bits (162), Expect = 6e-10
Identities = 36/72 (50%), Positives = 49/72 (68%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A GVASRR CE++I +G+V VNG++ KVD KD+I ++ N+ K +
Sbjct: 3 ERLQKYMAECGVASRRKCEKMIQDGRVKVNGTIVTELGFKVDYKKDTIELD-NKEIKLED 61
Query: 261 RKVYLALNKPKG 296
+KVY LNKPKG
Sbjct: 62 KKVYAILNKPKG 73
[124][TOP]
>UniRef100_B0BAH8 Pseudouridine synthase n=1 Tax=Chlamydia trachomatis
L2b/UCH-1/proctitis RepID=B0BAH8_CHLTB
Length = 241
Score = 67.0 bits (162), Expect = 6e-10
Identities = 35/71 (49%), Positives = 45/71 (63%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
RL+K LA++GVASRR C+E+IF G VTVNG P VD DS+ V G R+ +
Sbjct: 5 RLNKFLASAGVASRRKCDEIIFAGSVTVNGRAATGPFVTVDEEFDSVEVGGQRIGAE--K 62
Query: 264 KVYLALNKPKG 296
KVY ++KP G
Sbjct: 63 KVYFMVHKPLG 73
[125][TOP]
>UniRef100_C7MZG0 Ribosomal large subunit pseudouridine synthase B n=1
Tax=Saccharomonospora viridis DSM 43017
RepID=C7MZG0_SACVD
Length = 247
Score = 67.0 bits (162), Expect = 6e-10
Identities = 40/75 (53%), Positives = 50/75 (66%)
Frame = +3
Query: 72 SAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPK 251
S G RL KVLA +GVASRR+ EELI G+V+V+G V +VDP I+V+G R+
Sbjct: 7 SEGVRLQKVLAKAGVASRRASEELIAAGRVSVDGVVVRELGRRVDPDTAVIHVDGIRVQV 66
Query: 252 RQPRKVYLALNKPKG 296
R VYLALNKP+G
Sbjct: 67 RDD-LVYLALNKPRG 80
[126][TOP]
>UniRef100_C7IT37 Pseudouridine synthase n=1 Tax=Thermoanaerobacter ethanolicus CCSD1
RepID=C7IT37_THEET
Length = 236
Score = 67.0 bits (162), Expect = 6e-10
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K LA G+ASRR CEE I +G+V VNG V K++P D I + +++ +R+
Sbjct: 2 ERLQKYLAECGIASRRKCEEYILQGRVKVNGKVVKELGVKINPDVDIIEFD-DKIVRREK 60
Query: 261 RKVYLALNKPKG 296
+KVY+ LNKP G
Sbjct: 61 KKVYIILNKPTG 72
[127][TOP]
>UniRef100_B0K170 Pseudouridine synthase n=5 Tax=Thermoanaerobacter
RepID=B0K170_THEPX
Length = 236
Score = 67.0 bits (162), Expect = 6e-10
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K LA G+ASRR CEE I +G+V VNG V K++P D I + +++ +R+
Sbjct: 2 ERLQKYLAECGIASRRKCEEYILQGRVKVNGKVVKELGVKINPDVDIIEFD-DKIVRREK 60
Query: 261 RKVYLALNKPKG 296
+KVY+ LNKP G
Sbjct: 61 KKVYIMLNKPTG 72
[128][TOP]
>UniRef100_C1YTT2 Pseudouridine synthase n=1 Tax=Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111 RepID=C1YTT2_NOCDA
Length = 694
Score = 67.0 bits (162), Expect = 6e-10
Identities = 37/73 (50%), Positives = 48/73 (65%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
G RL K LAA+GVASRR+ EE+I G+V+V+G V +VDP I V+G R+
Sbjct: 456 GIRLQKALAAAGVASRRASEEMIAAGRVSVDGQVVRRFGARVDPESSEIRVDGMRV-VTA 514
Query: 258 PRKVYLALNKPKG 296
P K+Y ALNKP+G
Sbjct: 515 PDKLYFALNKPRG 527
[129][TOP]
>UniRef100_Q9KCJ5 Pseudouridine synthase n=1 Tax=Bacillus halodurans
RepID=Q9KCJ5_BACHD
Length = 242
Score = 66.6 bits (161), Expect = 8e-10
Identities = 37/72 (51%), Positives = 45/72 (62%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +G+ASRR E+LI EGKV VNG V KV+P +D I V G + K +P
Sbjct: 2 ERLQKVIAQAGIASRRKAEQLILEGKVKVNGQVVKELGIKVNPNQDDIEVEGVPVEKEEP 61
Query: 261 RKVYLALNKPKG 296
VY L KP G
Sbjct: 62 --VYFLLYKPTG 71
[130][TOP]
>UniRef100_Q7UUP0 Pseudouridine synthase n=1 Tax=Rhodopirellula baltica
RepID=Q7UUP0_RHOBA
Length = 395
Score = 66.6 bits (161), Expect = 8e-10
Identities = 38/92 (41%), Positives = 53/92 (57%)
Frame = +3
Query: 21 PKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTK 200
P SK R + K S+ +R++++LA++G SRR CEELI EG+V V+G T
Sbjct: 5 PSSSKPQRAKSSSKDKASSAKRINQLLASAGFGSRRQCEELIREGRVDVDGETITELGTT 64
Query: 201 VDPAKDSIYVNGNRLPKRQPRKVYLALNKPKG 296
VDP + V+GN L R + VY +NKP G
Sbjct: 65 VDPDLQKVRVDGNYL--RPQKLVYYVVNKPVG 94
[131][TOP]
>UniRef100_Q74DB4 Pseudouridine synthase n=1 Tax=Geobacter sulfurreducens
RepID=Q74DB4_GEOSL
Length = 247
Score = 66.6 bits (161), Expect = 8e-10
Identities = 36/72 (50%), Positives = 47/72 (65%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K+L+ +GVASRR E I EG+V VNG+V +K DP +D I V+G + +
Sbjct: 3 ERLQKLLSQAGVASRREAERFITEGRVAVNGTVVTELGSKADPERDRITVDGQPV-RPAE 61
Query: 261 RKVYLALNKPKG 296
+KVYL LNKP G
Sbjct: 62 KKVYLILNKPVG 73
[132][TOP]
>UniRef100_B5YJH7 Pseudouridine synthase n=1 Tax=Thermodesulfovibrio yellowstonii DSM
11347 RepID=B5YJH7_THEYD
Length = 237
Score = 66.6 bits (161), Expect = 8e-10
Identities = 39/71 (54%), Positives = 47/71 (66%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K+L+ G+ASRR EELI EG+VTVNG + Q K DP KD I V+G L K +P
Sbjct: 3 ERLQKILSDYGIASRRHAEELIKEGRVTVNGQIAVIGQ-KADPEKDYIKVDGKLLIKPEP 61
Query: 261 RKVYLALNKPK 293
KVY A KP+
Sbjct: 62 -KVYYAFYKPR 71
[133][TOP]
>UniRef100_A9WIX6 Pseudouridine synthase n=2 Tax=Chloroflexus RepID=A9WIX6_CHLAA
Length = 528
Score = 66.6 bits (161), Expect = 8e-10
Identities = 35/72 (48%), Positives = 47/72 (65%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KVLA++G+ASRR CE LI G+V VNG V P T+VD D + V+G L +
Sbjct: 4 ERLQKVLASAGIASRRDCEALIAAGRVMVNGRVVVVPGTRVDLDHDEVLVDGQPL-QMPT 62
Query: 261 RKVYLALNKPKG 296
++ Y+ L+KP G
Sbjct: 63 KRTYIMLHKPAG 74
[134][TOP]
>UniRef100_A9GX03 Pseudouridine synthase n=1 Tax=Sorangium cellulosum 'So ce 56'
RepID=A9GX03_SORC5
Length = 399
Score = 66.6 bits (161), Expect = 8e-10
Identities = 37/71 (52%), Positives = 46/71 (64%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K++A +GVASRR+ EELI G+V VNG V K D KD I V+G RL P
Sbjct: 3 ERLQKIIARAGVASRRASEELILAGRVRVNGRVVTELGLKADRQKDRIEVDGKRLVSEAP 62
Query: 261 RKVYLALNKPK 293
VY+AL+KP+
Sbjct: 63 --VYVALHKPR 71
[135][TOP]
>UniRef100_A5ECL6 Pseudouridine synthase n=1 Tax=Bradyrhizobium sp. BTAi1
RepID=A5ECL6_BRASB
Length = 690
Score = 66.6 bits (161), Expect = 8e-10
Identities = 35/74 (47%), Positives = 53/74 (71%)
Frame = +3
Query: 75 AGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKR 254
AG+R++KVLA +G+ASRR EE++ +G+VTVNG V N+P V D I V+G LP+R
Sbjct: 372 AGDRIAKVLARAGLASRRDAEEMVTQGRVTVNGRVINSPALDV-TENDVIQVDGAPLPQR 430
Query: 255 QPRKVYLALNKPKG 296
+ +++L +KP+G
Sbjct: 431 ERTRLFL-YHKPRG 443
[136][TOP]
>UniRef100_A4FKA2 Pseudouridine synthase n=1 Tax=Saccharopolyspora erythraea NRRL
2338 RepID=A4FKA2_SACEN
Length = 253
Score = 66.6 bits (161), Expect = 8e-10
Identities = 37/79 (46%), Positives = 50/79 (63%)
Frame = +3
Query: 60 NFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGN 239
N + G RL KVL+ +GVASRR+ E++I EG+V VNG + T+VDP I+V+GN
Sbjct: 9 NSPSAEGVRLQKVLSQAGVASRRAAEQMIVEGRVEVNGEIVLELGTRVDPDTAVIHVDGN 68
Query: 240 RLPKRQPRKVYLALNKPKG 296
R+ +L LNKPKG
Sbjct: 69 RIMVNAD-LTHLLLNKPKG 86
[137][TOP]
>UniRef100_C5RC66 Pseudouridine synthase n=1 Tax=Weissella paramesenteroides ATCC
33313 RepID=C5RC66_WEIPA
Length = 255
Score = 66.6 bits (161), Expect = 8e-10
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +GVASRR+ E++I EG+VTVNG V TKV+P D I VNG + ++
Sbjct: 3 ERLQKVMAQAGVASRRASEKMITEGQVTVNGQVIRELGTKVEPT-DHIEVNGTPIDSKE- 60
Query: 261 RKVYLALNKPKG 296
+ VY L+KP+G
Sbjct: 61 KLVYFLLDKPRG 72
[138][TOP]
>UniRef100_C5PRY7 Pseudouridine synthase n=1 Tax=Sphingobacterium spiritivorum ATCC
33861 RepID=C5PRY7_9SPHI
Length = 441
Score = 66.6 bits (161), Expect = 8e-10
Identities = 34/78 (43%), Positives = 51/78 (65%)
Frame = +3
Query: 60 NFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGN 239
++ D+ RL++ ++ +G+ SRR +ELI G ++VNG V +KVDPAKD I NG
Sbjct: 200 DYDDNGMIRLNRYISNAGICSRRKADELITAGVISVNGEVVTELGSKVDPAKDEIKYNGE 259
Query: 240 RLPKRQPRKVYLALNKPK 293
RL ++ + VY+ LNKPK
Sbjct: 260 RL--KREKMVYVLLNKPK 275
[139][TOP]
>UniRef100_C2G5N7 Pseudouridine synthase n=1 Tax=Sphingobacterium spiritivorum ATCC
33300 RepID=C2G5N7_9SPHI
Length = 441
Score = 66.6 bits (161), Expect = 8e-10
Identities = 34/78 (43%), Positives = 51/78 (65%)
Frame = +3
Query: 60 NFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGN 239
++ D+ RL++ ++ +G+ SRR +ELI G ++VNG V +KVDPAKD I NG
Sbjct: 200 DYDDNGMIRLNRYISNAGICSRRKADELITAGVISVNGEVVTELGSKVDPAKDEIKYNGE 259
Query: 240 RLPKRQPRKVYLALNKPK 293
RL ++ + VY+ LNKPK
Sbjct: 260 RL--KREKMVYVLLNKPK 275
[140][TOP]
>UniRef100_C0TZK6 Pseudouridine synthase n=1 Tax=Geodermatophilus obscurus DSM 43160
RepID=C0TZK6_9ACTO
Length = 280
Score = 66.6 bits (161), Expect = 8e-10
Identities = 35/73 (47%), Positives = 46/73 (63%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
GERL KVLA +GV SRR E ++ +G+++VNG +VDP +D I V+G R+ R
Sbjct: 42 GERLQKVLARAGVGSRRVVENMVDQGRISVNGKTVAVQGMRVDPERDKIAVDGVRIELRD 101
Query: 258 PRKVYLALNKPKG 296
R Y ALNKP G
Sbjct: 102 DRVTY-ALNKPPG 113
[141][TOP]
>UniRef100_B6FZT7 Pseudouridine synthase n=1 Tax=Clostridium hiranonis DSM 13275
RepID=B6FZT7_9CLOT
Length = 238
Score = 66.6 bits (161), Expect = 8e-10
Identities = 33/71 (46%), Positives = 48/71 (67%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
R++K +A+ GVASRR EELI G+VT+NG + T VD KD + V+G + ++ +
Sbjct: 2 RINKYIASCGVASRRKAEELIISGRVTINGELITELSTTVDETKDIVEVDGVPI-NQEEK 60
Query: 264 KVYLALNKPKG 296
KVY+ LNKP+G
Sbjct: 61 KVYILLNKPEG 71
[142][TOP]
>UniRef100_Q016A8 Homology to unknown gene n=1 Tax=Ostreococcus tauri
RepID=Q016A8_OSTTA
Length = 405
Score = 66.6 bits (161), Expect = 8e-10
Identities = 46/115 (40%), Positives = 60/115 (52%), Gaps = 19/115 (16%)
Frame = +3
Query: 9 SSPP----PKYSKAAR----RFYNENFKDSA--------GERLSKVLAASGVASRRSCEE 140
S+PP P+ K R RF + +K A GERL+K LA+ GVASRR ++
Sbjct: 103 SAPPTPKRPQPGKGKRTPQLRFDGDTYKTPAARRRERDEGERLNKALASLGVASRRGADD 162
Query: 141 LIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP---KRQPRKVYLALNKPKG 296
LIF G+V VNG+ PQTKV+ D + V+G + Y LNKPKG
Sbjct: 163 LIFGGRVKVNGTTITAPQTKVNLNTDVVMVDGKVVEGGVSFVKEHTYFMLNKPKG 217
[143][TOP]
>UniRef100_Q89DE4 Pseudouridine synthase n=1 Tax=Bradyrhizobium japonicum
RepID=Q89DE4_BRAJA
Length = 696
Score = 66.2 bits (160), Expect = 1e-09
Identities = 33/74 (44%), Positives = 51/74 (68%)
Frame = +3
Query: 75 AGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKR 254
AGER++K LA +G+ASRR EE++ +G+V VNG V N+P + P D + V+G LP R
Sbjct: 375 AGERIAKALARAGLASRRDAEEMVTQGRVAVNGRVINSPALDITP-NDVVTVDGKPLPPR 433
Query: 255 QPRKVYLALNKPKG 296
+ +++L +KP+G
Sbjct: 434 ERTRLFL-YHKPRG 446
[144][TOP]
>UniRef100_Q2LSY4 Pseudouridine synthase n=1 Tax=Syntrophus aciditrophicus SB
RepID=Q2LSY4_SYNAS
Length = 251
Score = 66.2 bits (160), Expect = 1e-09
Identities = 36/72 (50%), Positives = 48/72 (66%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K+LA SGVASRR EE+I EG+V+VN + +K D +D I V+G +L +
Sbjct: 3 ERLQKILARSGVASRRKAEEMIREGRVSVNSEIVRELGSKADIERDEIRVDG-KLICAEE 61
Query: 261 RKVYLALNKPKG 296
KVY+ LNKP+G
Sbjct: 62 TKVYVMLNKPRG 73
[145][TOP]
>UniRef100_B2JA39 Pseudouridine synthase n=1 Tax=Nostoc punctiforme PCC 73102
RepID=B2JA39_NOSP7
Length = 252
Score = 66.2 bits (160), Expect = 1e-09
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ- 257
ERL K+LA G+ASRR EE+I +V +NG + + Q KVDP KD+I ++G L ++Q
Sbjct: 3 ERLQKILAQWGIASRREAEEMIRHSRVQINGKLAHLGQ-KVDPQKDAIAIDGKTLSEKQR 61
Query: 258 PRKVYLALNKPKG 296
P +YL L+KP G
Sbjct: 62 PALIYLLLHKPAG 74
[146][TOP]
>UniRef100_C2CVY3 Pseudouridine synthase n=1 Tax=Gardnerella vaginalis ATCC 14019
RepID=C2CVY3_GARVA
Length = 257
Score = 66.2 bits (160), Expect = 1e-09
Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Frame = +3
Query: 18 PPKYSKAARRFYNENFKDSAGE-RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQ 194
P YS+A N+ ++S RL K+LA +G SRR CEE+I +G+V V+ + T
Sbjct: 2 PNAYSRA-----NQAQQESKNAVRLQKLLAEAGFGSRRKCEEIILDGRVEVDDELVTTLG 56
Query: 195 TKVDPAKDSIYVNGNRLPKRQPRKVYLALNKPK 293
T+VDP+K I V+G+R+ K + V LALNKPK
Sbjct: 57 TRVDPSKQKIRVDGSRV-KFNHKLVTLALNKPK 88
[147][TOP]
>UniRef100_C1WQV7 Pseudouridine synthase n=1 Tax=Kribbella flavida DSM 17836
RepID=C1WQV7_9ACTO
Length = 244
Score = 66.2 bits (160), Expect = 1e-09
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
G RL K LA +GVASRR+ E LI +G+V V+G+V T+VDPA I V+G R+P
Sbjct: 6 GIRLQKALAQAGVASRRNAELLIEQGRVEVDGAVVTEFGTRVDPAVSVIRVDGERIPP-V 64
Query: 258 PRKVYLALNKPKG 296
VYL LNKP+G
Sbjct: 65 TAHVYLVLNKPRG 77
[148][TOP]
>UniRef100_A1HTX2 Pseudouridine synthase n=1 Tax=Thermosinus carboxydivorans Nor1
RepID=A1HTX2_9FIRM
Length = 241
Score = 66.2 bits (160), Expect = 1e-09
Identities = 33/72 (45%), Positives = 47/72 (65%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K+L+ +G+ASRR+ E+LI +G+V VNG + KVD +D + V+G + P
Sbjct: 3 ERLQKILSQAGIASRRAAEKLILDGRVAVNGKIITELGAKVDWPRDRVTVDGKPIAAEAP 62
Query: 261 RKVYLALNKPKG 296
VY+ LNKPKG
Sbjct: 63 --VYILLNKPKG 72
[149][TOP]
>UniRef100_Q8NQK8 Pseudouridine synthase n=1 Tax=Corynebacterium glutamicum
RepID=Q8NQK8_CORGL
Length = 252
Score = 65.9 bits (159), Expect = 1e-09
Identities = 40/83 (48%), Positives = 50/83 (60%)
Frame = +3
Query: 48 FYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIY 227
F N N DS G RL KVLA +GVASRR E LI +G+V VN + T +VDP D I
Sbjct: 3 FLNRN--DSDGVRLQKVLAQAGVASRRHAEILIDQGRVEVNDRIVTTQGVRVDPNNDVIR 60
Query: 228 VNGNRLPKRQPRKVYLALNKPKG 296
V+G R+ + + Y LNKP+G
Sbjct: 61 VDGVRIHINEDLE-YFVLNKPRG 82
[150][TOP]
>UniRef100_B9E6N1 Pseudouridine synthase n=1 Tax=Macrococcus caseolyticus JCSC5402
RepID=B9E6N1_MACCJ
Length = 245
Score = 65.9 bits (159), Expect = 1e-09
Identities = 38/72 (52%), Positives = 44/72 (61%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A SGV SRR E LI EGKVTVNG TKV P+ D I V G +P P
Sbjct: 6 ERLQKVIAKSGVTSRRKAEVLITEGKVTVNGQTVTELGTKVKPS-DIIEVEG--IPLENP 62
Query: 261 RKVYLALNKPKG 296
K+Y+ +KP G
Sbjct: 63 EKIYILFHKPTG 74
[151][TOP]
>UniRef100_B5YF67 Ribosomal large subunit pseudouridine synthase B n=1
Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YF67_DICT6
Length = 241
Score = 65.9 bits (159), Expect = 1e-09
Identities = 35/72 (48%), Positives = 48/72 (66%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A +GV SRR E+LI EG+V VNG V T K+DP KD + ++ N++ K
Sbjct: 3 ERLQKFIAKAGVTSRRKAEKLILEGRVKVNGEVIRTLGVKIDPEKDIVEID-NKIVK-PD 60
Query: 261 RKVYLALNKPKG 296
+K+Y+AL KP G
Sbjct: 61 KKIYIALYKPVG 72
[152][TOP]
>UniRef100_B4S500 Pseudouridine synthase n=1 Tax=Prosthecochloris aestuarii DSM 271
RepID=B4S500_PROA2
Length = 248
Score = 65.9 bits (159), Expect = 1e-09
Identities = 31/72 (43%), Positives = 44/72 (61%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
G R++K LA G+ASRR + L+ G+V +NG + T KV P KD + V G L +
Sbjct: 10 GIRINKYLALCGIASRRESDRLVEAGEVMINGRIARTQGVKVHPGKDEVVVKGRILALPE 69
Query: 258 PRKVYLALNKPK 293
+KVY+ LNKP+
Sbjct: 70 EKKVYILLNKPR 81
[153][TOP]
>UniRef100_A1AQQ8 Pseudouridine synthase n=1 Tax=Pelobacter propionicus DSM 2379
RepID=A1AQQ8_PELPD
Length = 271
Score = 65.9 bits (159), Expect = 1e-09
Identities = 35/72 (48%), Positives = 48/72 (66%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K+++ +G+ASRR+ EE+I G+VTVNG V +K DP DSI V+G R K
Sbjct: 3 ERLQKLISQAGIASRRAAEEMILAGRVTVNGLVVTELGSKADPTVDSIAVDG-RPVKPAS 61
Query: 261 RKVYLALNKPKG 296
+ +Y+ LNKP G
Sbjct: 62 QHLYILLNKPAG 73
[154][TOP]
>UniRef100_Q6M5E9 Pseudouridine synthase n=1 Tax=Corynebacterium glutamicum
RepID=Q6M5E9_CORGL
Length = 320
Score = 65.9 bits (159), Expect = 1e-09
Identities = 40/83 (48%), Positives = 50/83 (60%)
Frame = +3
Query: 48 FYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIY 227
F N N DS G RL KVLA +GVASRR E LI +G+V VN + T +VDP D I
Sbjct: 71 FLNRN--DSDGVRLQKVLAQAGVASRRHAEILIDQGRVEVNDRIVTTQGVRVDPNNDVIR 128
Query: 228 VNGNRLPKRQPRKVYLALNKPKG 296
V+G R+ + + Y LNKP+G
Sbjct: 129 VDGVRIHINEDLE-YFVLNKPRG 150
[155][TOP]
>UniRef100_C9NK87 Pseudouridine synthase n=1 Tax=Streptomyces flavogriseus ATCC 33331
RepID=C9NK87_9ACTO
Length = 389
Score = 65.9 bits (159), Expect = 1e-09
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = +3
Query: 69 DSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP 248
+ GERL K+LA +G+ SRR+CEELI + +V VNG + +VDP KD I V+G L
Sbjct: 149 EQEGERLQKILARAGMGSRRACEELIEQARVEVNGEIVLEQGMRVDPQKDEIKVDG--LT 206
Query: 249 KRQPRKVYLALNKPKG 296
++ ALNKP G
Sbjct: 207 VATQSYLFFALNKPAG 222
[156][TOP]
>UniRef100_C3JWQ3 Pseudouridine synthase (Fragment) n=1 Tax=Rhodococcus erythropolis
SK121 RepID=C3JWQ3_RHOER
Length = 354
Score = 65.9 bits (159), Expect = 1e-09
Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Frame = +3
Query: 3 VSSSPPPKYSKAARRFYNENFKDSA-----GERLSKVLAASGVASRRSCEELIFEGKVTV 167
VS +P +K AR + E K G RL KVLA +GVASRR+ EELI +G+V V
Sbjct: 83 VSQNPLVSNAKPARHQHAEITKHDGPPKGDGVRLQKVLAQAGVASRRAAEELIDQGRVEV 142
Query: 168 NGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPRKVYLALNKPKG 296
+G + +VDP + V+G R+ Q VYLA+NKP+G
Sbjct: 143 DGRIVVEQGLRVDPENAVVRVDGVRVVV-QKDLVYLAMNKPRG 184
[157][TOP]
>UniRef100_C0W9S9 Pseudouridine synthase n=1 Tax=Acidaminococcus sp. D21
RepID=C0W9S9_9FIRM
Length = 246
Score = 65.9 bits (159), Expect = 1e-09
Identities = 37/70 (52%), Positives = 46/70 (65%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K++AASGVASRR CE++I +G+VTVNG TKV P D I ++G P R+
Sbjct: 7 ERLQKMMAASGVASRRECEKIILQGRVTVNGKPVIELGTKVSPT-DRILIDGR--PLRKE 63
Query: 261 RKVYLALNKP 290
R Y LNKP
Sbjct: 64 RHRYFLLNKP 73
[158][TOP]
>UniRef100_B7R7M2 Pseudouridine synthase n=2 Tax=Thermoanaerobacteraceae
RepID=B7R7M2_9THEO
Length = 236
Score = 65.9 bits (159), Expect = 1e-09
Identities = 34/71 (47%), Positives = 46/71 (64%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
RL K LA G+ASRR CEE I +G+V VNG V TK+DP D I + +++ +R+ +
Sbjct: 3 RLQKYLAECGIASRRKCEEYILQGRVKVNGKVVKELGTKIDPDVDIIEFD-DKIVRREEK 61
Query: 264 KVYLALNKPKG 296
KVY+ L KP G
Sbjct: 62 KVYIMLYKPAG 72
[159][TOP]
>UniRef100_Q6NAL9 Pseudouridine synthase n=1 Tax=Rhodopseudomonas palustris
RepID=Q6NAL9_RHOPA
Length = 731
Score = 65.5 bits (158), Expect = 2e-09
Identities = 35/76 (46%), Positives = 52/76 (68%)
Frame = +3
Query: 69 DSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP 248
D AGER++KV+A +G+ SRR E I EG+VTVNG V ++P V A D I ++G LP
Sbjct: 401 DKAGERIAKVVARAGLCSRRDAEAWITEGRVTVNGKVIDSPALDV-KASDIITIDGKPLP 459
Query: 249 KRQPRKVYLALNKPKG 296
+R+ +++L +KP+G
Sbjct: 460 ERERTRLFL-YHKPRG 474
[160][TOP]
>UniRef100_B8CW11 Pseudouridine synthase n=1 Tax=Halothermothrix orenii H 168
RepID=B8CW11_HALOH
Length = 237
Score = 65.5 bits (158), Expect = 2e-09
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A +GVASRR E++I +G+V VNG + TK+DP KD + V+G + K
Sbjct: 2 ERLQKYMAHAGVASRRKSEKIITQGRVKVNGKIVTELGTKIDPDKDIVEVDGRVISKE-- 59
Query: 261 RKVYLALNKPKG 296
+ VY+ LNKP G
Sbjct: 60 KYVYILLNKPVG 71
[161][TOP]
>UniRef100_B3QIH2 Pseudouridine synthase n=1 Tax=Rhodopseudomonas palustris TIE-1
RepID=B3QIH2_RHOPT
Length = 736
Score = 65.5 bits (158), Expect = 2e-09
Identities = 35/76 (46%), Positives = 52/76 (68%)
Frame = +3
Query: 69 DSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP 248
D AGER++KV+A +G+ SRR E I EG+VTVNG V ++P V A D I ++G LP
Sbjct: 406 DKAGERIAKVVARAGLCSRRDAEAWITEGRVTVNGKVIDSPALDV-KASDVITIDGKPLP 464
Query: 249 KRQPRKVYLALNKPKG 296
+R+ +++L +KP+G
Sbjct: 465 ERERTRLFL-YHKPRG 479
[162][TOP]
>UniRef100_C7NI32 Pseudouridine synthase family protein n=1 Tax=Kytococcus
sedentarius DSM 20547 RepID=C7NI32_KYTSD
Length = 284
Score = 65.5 bits (158), Expect = 2e-09
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Frame = +3
Query: 72 SAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP- 248
S GERL KVLAA+G+ SRR+CE++I +G+V V+G ++DP++ + V+G LP
Sbjct: 44 SQGERLQKVLAAAGLGSRRACEQMIADGRVEVDGVPVTELGVRIDPSRQKVAVDG--LPV 101
Query: 249 KRQPRKVYLALNKPKG 296
+ KVYL NKP G
Sbjct: 102 QLDDSKVYLVFNKPVG 117
[163][TOP]
>UniRef100_UPI0001B5A1F7 ribosomal large subunit pseudouridine synthase B n=1
Tax=Mycobacterium avium subsp. avium ATCC 25291
RepID=UPI0001B5A1F7
Length = 247
Score = 65.1 bits (157), Expect = 2e-09
Identities = 36/76 (47%), Positives = 52/76 (68%)
Frame = +3
Query: 69 DSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP 248
++ G RL KVL+ +G+ASRR+ E+LI +G+V V+G V T+VDP I V+G R+
Sbjct: 3 EAQGIRLQKVLSQAGIASRRAAEKLIVDGRVEVDGQVVTELGTRVDPDAAVIRVDGARVV 62
Query: 249 KRQPRKVYLALNKPKG 296
+ +VYLALNKP+G
Sbjct: 63 LDE-SQVYLALNKPRG 77
[164][TOP]
>UniRef100_Q740D8 Pseudouridine synthase n=1 Tax=Mycobacterium avium subsp.
paratuberculosis RepID=Q740D8_MYCPA
Length = 247
Score = 65.1 bits (157), Expect = 2e-09
Identities = 36/76 (47%), Positives = 52/76 (68%)
Frame = +3
Query: 69 DSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP 248
++ G RL KVL+ +G+ASRR+ E+LI +G+V V+G V T+VDP I V+G R+
Sbjct: 3 EAQGIRLQKVLSQAGIASRRAAEKLIVDGRVEVDGQVVTELGTRVDPDAAVIRVDGARVV 62
Query: 249 KRQPRKVYLALNKPKG 296
+ +VYLALNKP+G
Sbjct: 63 LDE-SQVYLALNKPRG 77
[165][TOP]
>UniRef100_B0TFD8 Pseudouridine synthase n=1 Tax=Heliobacterium modesticaldum Ice1
RepID=B0TFD8_HELMI
Length = 333
Score = 65.1 bits (157), Expect = 2e-09
Identities = 37/76 (48%), Positives = 49/76 (64%)
Frame = +3
Query: 69 DSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP 248
DS RL K+LAA GVASRR E +I G+V +NG+V +VD A+D I V+G R+
Sbjct: 2 DSQTVRLQKLLAAHGVASRREAEAMIRAGRVRINGTVVREQGVRVDGARDVIEVDG-RIL 60
Query: 249 KRQPRKVYLALNKPKG 296
KR+ +Y AL KP+G
Sbjct: 61 KRREAPLYYALYKPRG 76
[166][TOP]
>UniRef100_A0QH61 Pseudouridine synthase n=1 Tax=Mycobacterium avium 104
RepID=A0QH61_MYCA1
Length = 248
Score = 65.1 bits (157), Expect = 2e-09
Identities = 36/76 (47%), Positives = 52/76 (68%)
Frame = +3
Query: 69 DSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP 248
++ G RL KVL+ +G+ASRR+ E+LI +G+V V+G V T+VDP I V+G R+
Sbjct: 4 EAQGIRLQKVLSQAGIASRRAAEKLIVDGRVEVDGQVVTELGTRVDPDAAVIRVDGARVV 63
Query: 249 KRQPRKVYLALNKPKG 296
+ +VYLALNKP+G
Sbjct: 64 LDE-SQVYLALNKPRG 78
[167][TOP]
>UniRef100_C5RKI9 Pseudouridine synthase n=1 Tax=Clostridium cellulovorans 743B
RepID=C5RKI9_CLOCL
Length = 235
Score = 65.1 bits (157), Expect = 2e-09
Identities = 36/70 (51%), Positives = 46/70 (65%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K +A GVASRR CEELI +GKV+VN ++ KV+ D I VN N + +
Sbjct: 2 ERLQKYMAKCGVASRRKCEELILQGKVSVNNTIITELGYKVEEENDIIKVN-NVIIYPEA 60
Query: 261 RKVYLALNKP 290
+KVY+ALNKP
Sbjct: 61 QKVYIALNKP 70
[168][TOP]
>UniRef100_C4FF15 Pseudouridine synthase n=1 Tax=Bifidobacterium angulatum DSM 20098
RepID=C4FF15_9BIFI
Length = 257
Score = 65.1 bits (157), Expect = 2e-09
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 9/102 (8%)
Frame = +3
Query: 18 PPKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQT 197
P YS+A + N + G RL K+LA +G SRR CE++I +G+V V+G + T
Sbjct: 2 PNAYSRARKAHDN----NQEGIRLQKLLAQAGFGSRRKCEQMITDGRVEVDGELVTELGT 57
Query: 198 KVDPAKDSIYVNGNR---------LPKRQPRKVYLALNKPKG 296
+VDP I V+G+R L +PRKV A++ PKG
Sbjct: 58 RVDPTHQQIRVDGSRVRISNKHITLALNKPRKVLSAMDDPKG 99
[169][TOP]
>UniRef100_B4W2G6 Pseudouridine synthase n=1 Tax=Microcoleus chthonoplastes PCC 7420
RepID=B4W2G6_9CYAN
Length = 255
Score = 65.1 bits (157), Expect = 2e-09
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRL-PKRQ 257
ER+ K+++ G+ASRR E++I G+V +NG+V Q K +P D I VNG RL P +
Sbjct: 3 ERVQKIISQWGIASRRQAEKMIVAGRVRLNGTVVQLGQ-KANPETDLIEVNGQRLKPSNR 61
Query: 258 PRKVYLALNKPKG 296
P+ +YL LNKP G
Sbjct: 62 PQAIYLLLNKPVG 74
[170][TOP]
>UniRef100_A9EKS8 Pseudouridine synthase n=1 Tax=Phaeobacter gallaeciensis 2.10
RepID=A9EKS8_9RHOB
Length = 447
Score = 65.1 bits (157), Expect = 2e-09
Identities = 32/73 (43%), Positives = 50/73 (68%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
G+R++KVL+ +GVASRR E +I EG+V VNG V ++P V KD I V+GN++ +
Sbjct: 51 GDRIAKVLSRAGVASRREAERMIAEGRVAVNGKVIDSPALNVVLGKDRIVVDGNQMQDPE 110
Query: 258 PRKVYLALNKPKG 296
P ++++ +KP G
Sbjct: 111 PPRLWM-YHKPSG 122
[171][TOP]
>UniRef100_UPI0001850E1A ribosomal large subunit pseudouridine synthase B n=1 Tax=Bacillus
coahuilensis m4-4 RepID=UPI0001850E1A
Length = 125
Score = 64.7 bits (156), Expect = 3e-09
Identities = 37/72 (51%), Positives = 47/72 (65%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A SG+ASRR EELI EGKV VNG + TKV P D++ V G ++ + +
Sbjct: 2 ERLQKVIAHSGIASRRKSEELIVEGKVKVNGVIVKELGTKVGP-NDTVEVEGVKVEREE- 59
Query: 261 RKVYLALNKPKG 296
KVY L KP+G
Sbjct: 60 -KVYFLLYKPRG 70
[172][TOP]
>UniRef100_Q828Z9 Pseudouridine synthase n=1 Tax=Streptomyces avermitilis
RepID=Q828Z9_STRAW
Length = 356
Score = 64.7 bits (156), Expect = 3e-09
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = +3
Query: 69 DSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP 248
+ GERL KVLA +G SRRSCEELI + +V VNG + +VDP KD I V+G +
Sbjct: 116 EQEGERLQKVLARAGYGSRRSCEELIEQARVEVNGEIVLEQGLRVDPEKDEIKVDGLTVA 175
Query: 249 KRQPRKVYLALNKPKG 296
+ + + +LNKP G
Sbjct: 176 TQSYQ--FFSLNKPAG 189
[173][TOP]
>UniRef100_Q1WTK6 Pseudouridine synthase n=1 Tax=Lactobacillus salivarius UCC118
RepID=Q1WTK6_LACS1
Length = 242
Score = 64.7 bits (156), Expect = 3e-09
Identities = 39/72 (54%), Positives = 51/72 (70%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +GVASRR+ E+LI EG+V VNG V TKV+ + DSI V+G +L K+
Sbjct: 3 ERLQKVMANAGVASRRASEKLIQEGRVMVNGVVVTELGTKVE-SDDSISVDG-KLLKKDE 60
Query: 261 RKVYLALNKPKG 296
+KVY L KP+G
Sbjct: 61 KKVYYLLYKPRG 72
[174][TOP]
>UniRef100_Q1QIP1 Pseudouridine synthase n=1 Tax=Nitrobacter hamburgensis X14
RepID=Q1QIP1_NITHX
Length = 687
Score = 64.7 bits (156), Expect = 3e-09
Identities = 33/73 (45%), Positives = 52/73 (71%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
GER++KV+A +GVASRR EE + +G+V VNG V N+P V ++D I ++G LP+R+
Sbjct: 359 GERIAKVMARAGVASRRDAEEWVTQGRVAVNGRVINSPALDV-TSRDVITIDGQPLPERE 417
Query: 258 PRKVYLALNKPKG 296
+++L +KP+G
Sbjct: 418 RTRLFL-YHKPRG 429
[175][TOP]
>UniRef100_A9WRN5 Pseudouridine synthase n=1 Tax=Renibacterium salmoninarum ATCC
33209 RepID=A9WRN5_RENSM
Length = 345
Score = 64.7 bits (156), Expect = 3e-09
Identities = 35/80 (43%), Positives = 51/80 (63%)
Frame = +3
Query: 57 ENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNG 236
++ D G RL KV+AA+GVASRR CEE+I +G+V V+GS+ +V+ I V+G
Sbjct: 98 QDMHDPEGVRLQKVMAAAGVASRRVCEEMIEDGRVEVDGSIVTELGLRVNVETAVISVDG 157
Query: 237 NRLPKRQPRKVYLALNKPKG 296
RL ++ +YL NKP+G
Sbjct: 158 IRLQLKE-NMIYLVFNKPRG 176
[176][TOP]
>UniRef100_A4Z0Q7 Pseudouridine synthase n=1 Tax=Bradyrhizobium sp. ORS278
RepID=A4Z0Q7_BRASO
Length = 683
Score = 64.7 bits (156), Expect = 3e-09
Identities = 33/73 (45%), Positives = 52/73 (71%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
GER++KVLA +G+ASRR EE++ +G+V+VNG + N+P V D I V+G LP+R+
Sbjct: 365 GERIAKVLARAGLASRRDAEEMVTQGRVSVNGRIINSPALDV-TENDEIKVDGAPLPERE 423
Query: 258 PRKVYLALNKPKG 296
+++L +KP+G
Sbjct: 424 RTRLFL-YHKPRG 435
[177][TOP]
>UniRef100_A0QYQ1 Pseudouridine synthase n=1 Tax=Mycobacterium smegmatis str. MC2 155
RepID=A0QYQ1_MYCS2
Length = 247
Score = 64.7 bits (156), Expect = 3e-09
Identities = 34/76 (44%), Positives = 49/76 (64%)
Frame = +3
Query: 69 DSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP 248
+ G RL KVL+ +G+ASRR E +I +G+V V+G + T+VDPA I V+G+R+
Sbjct: 3 EEQGVRLQKVLSQAGIASRRVAERMIIDGRVEVDGQIVTELGTRVDPAVADIRVDGSRI- 61
Query: 249 KRQPRKVYLALNKPKG 296
VYLA+NKP+G
Sbjct: 62 ILDDTMVYLAINKPRG 77
[178][TOP]
>UniRef100_Q1Q1Q0 Pseudouridine synthase n=1 Tax=Candidatus Kuenenia stuttgartiensis
RepID=Q1Q1Q0_9BACT
Length = 260
Score = 64.7 bits (156), Expect = 3e-09
Identities = 34/71 (47%), Positives = 43/71 (60%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KVLA++G+ SRR CE +I G+VTV+G VD K IY +G +P R
Sbjct: 3 ERLQKVLASAGIGSRRECENVILAGRVTVDGERVTALGATVDAGKSVIYCDG--MPIRPE 60
Query: 261 RKVYLALNKPK 293
K+Y LNKPK
Sbjct: 61 AKIYYLLNKPK 71
[179][TOP]
>UniRef100_C2EFL2 Pseudouridine synthase n=1 Tax=Lactobacillus salivarius ATCC 11741
RepID=C2EFL2_9LACO
Length = 242
Score = 64.7 bits (156), Expect = 3e-09
Identities = 39/72 (54%), Positives = 51/72 (70%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +GVASRR+ E+LI EG+V VNG V TKV+ + DSI V+G +L K+
Sbjct: 3 ERLQKVMANAGVASRRASEKLIQEGRVMVNGVVVTELGTKVE-SDDSISVDG-KLLKKDE 60
Query: 261 RKVYLALNKPKG 296
+KVY L KP+G
Sbjct: 61 KKVYYLLYKPRG 72
[180][TOP]
>UniRef100_C0WLF7 Pseudouridine synthase n=1 Tax=Corynebacterium accolens ATCC 49725
RepID=C0WLF7_9CORY
Length = 303
Score = 64.7 bits (156), Expect = 3e-09
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
GERL KVLA +GVASRR E LI G+V VNG+V KV+PA D I V+G R+ +
Sbjct: 62 GERLQKVLAKAGVASRRHAEILIDAGRVEVNGNVILKQGVKVNPAVDVIRVDGVRVNVNE 121
Query: 258 PRKVYLALNKPKG 296
++ Y LNKP+G
Sbjct: 122 DQE-YFILNKPRG 133
[181][TOP]
>UniRef100_B1C6T1 Pseudouridine synthase n=1 Tax=Anaerofustis stercorihominis DSM
17244 RepID=B1C6T1_9FIRM
Length = 238
Score = 64.7 bits (156), Expect = 3e-09
Identities = 35/71 (49%), Positives = 45/71 (63%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
R++K LA+ GVASRR CEE+I GKVTVNG V T ++ KD + V G + +
Sbjct: 6 RINKYLASCGVASRRKCEEIISRGKVTVNGEVVRELGTIINVEKDLVKVYGKEV-SLDTK 64
Query: 264 KVYLALNKPKG 296
KVY LNKP+G
Sbjct: 65 KVYYMLNKPQG 75
[182][TOP]
>UniRef100_UPI0001B4EF2F pseudouridine synthase n=1 Tax=Streptomyces viridochromogenes DSM
40736 RepID=UPI0001B4EF2F
Length = 372
Score = 64.3 bits (155), Expect = 4e-09
Identities = 34/76 (44%), Positives = 47/76 (61%)
Frame = +3
Query: 69 DSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP 248
+ GERL KVLA +G SRR+CEELI E +V +NG + +VDP KD I V+G +
Sbjct: 132 EQEGERLQKVLARAGFGSRRACEELIEEARVEINGEIVLEQGRRVDPEKDEIKVDGLTVA 191
Query: 249 KRQPRKVYLALNKPKG 296
+ + + +LNKP G
Sbjct: 192 TQSYQ--FFSLNKPAG 205
[183][TOP]
>UniRef100_A8FEQ2 Pseudouridine synthase n=1 Tax=Bacillus pumilus SAFR-032
RepID=A8FEQ2_BACP2
Length = 281
Score = 64.3 bits (155), Expect = 4e-09
Identities = 38/72 (52%), Positives = 46/72 (63%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +GVASRR EELI EG+VTVNG KV + D I VNG +L + +P
Sbjct: 39 ERLQKVIAHAGVASRRKAEELIKEGRVTVNGQTVTELGVKVG-SSDKIEVNGLKLEREEP 97
Query: 261 RKVYLALNKPKG 296
VY L KP+G
Sbjct: 98 --VYFMLYKPRG 107
[184][TOP]
>UniRef100_A1TA74 Pseudouridine synthase n=1 Tax=Mycobacterium vanbaalenii PYR-1
RepID=A1TA74_MYCVP
Length = 247
Score = 64.3 bits (155), Expect = 4e-09
Identities = 35/76 (46%), Positives = 50/76 (65%)
Frame = +3
Query: 69 DSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP 248
D+ G RL KVL+ +G+ASRR E++I +G+V V+G + T+VDPA I V+G R+
Sbjct: 3 DNDGIRLQKVLSQAGIASRRVAEKMIRDGRVEVDGRIVTELGTRVDPAASVIRVDGARIT 62
Query: 249 KRQPRKVYLALNKPKG 296
VYLA+NKP+G
Sbjct: 63 V-DDTLVYLAINKPRG 77
[185][TOP]
>UniRef100_C8NUR8 16S rRNA uridine-516 pseudouridylate synthase n=1
Tax=Corynebacterium genitalium ATCC 33030
RepID=C8NUR8_9CORY
Length = 318
Score = 64.3 bits (155), Expect = 4e-09
Identities = 37/77 (48%), Positives = 48/77 (62%)
Frame = +3
Query: 66 KDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRL 245
K G RL KVLA +GVASRR E +I EG+V VNG + +VDP D I V+G R+
Sbjct: 73 KRGDGIRLQKVLAQAGVASRRHSEVMIDEGRVEVNGKIVRQQGVRVDPNVDIIRVDGVRV 132
Query: 246 PKRQPRKVYLALNKPKG 296
+ ++ Y ALNKP+G
Sbjct: 133 NVNEDQQ-YFALNKPRG 148
[186][TOP]
>UniRef100_C6RBQ2 Pseudouridine synthase n=1 Tax=Corynebacterium tuberculostearicum
SK141 RepID=C6RBQ2_9CORY
Length = 303
Score = 64.3 bits (155), Expect = 4e-09
Identities = 36/73 (49%), Positives = 47/73 (64%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
GERL KVLA +GVASRR E LI G+V VNG + + KV+P+ D I V+G R+ +
Sbjct: 62 GERLQKVLAKAGVASRRHAEILIDAGRVEVNGKIISKQGVKVNPSVDVIRVDGVRVNVNE 121
Query: 258 PRKVYLALNKPKG 296
+ Y LNKP+G
Sbjct: 122 EHE-YFVLNKPRG 133
[187][TOP]
>UniRef100_C6HYA4 Pseudouridine synthase n=1 Tax=Leptospirillum ferrodiazotrophum
RepID=C6HYA4_9BACT
Length = 638
Score = 64.3 bits (155), Expect = 4e-09
Identities = 36/71 (50%), Positives = 42/71 (59%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
RL K+LA GVASRR E+LI G VTV+G V P T+VDP I V+G LP R+P
Sbjct: 27 RLHKILAHRGVASRRKSEQLIAAGSVTVDGEVVTEPGTRVDPKHQVILVDGRPLP-REPE 85
Query: 264 KVYLALNKPKG 296
KPKG
Sbjct: 86 TFLFLFYKPKG 96
[188][TOP]
>UniRef100_B4AKE3 Pseudouridine synthase n=1 Tax=Bacillus pumilus ATCC 7061
RepID=B4AKE3_BACPU
Length = 290
Score = 64.3 bits (155), Expect = 4e-09
Identities = 38/72 (52%), Positives = 46/72 (63%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +GVASRR EELI EG+VTVNG KV + D I VNG +L + +P
Sbjct: 48 ERLQKVIAHAGVASRRKAEELIKEGRVTVNGQTVTELGVKVG-SSDKIEVNGLKLEREEP 106
Query: 261 RKVYLALNKPKG 296
VY L KP+G
Sbjct: 107 --VYFMLYKPRG 116
[189][TOP]
>UniRef100_A7VSS7 Pseudouridine synthase n=1 Tax=Clostridium leptum DSM 753
RepID=A7VSS7_9CLOT
Length = 256
Score = 64.3 bits (155), Expect = 4e-09
Identities = 34/72 (47%), Positives = 43/72 (59%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K+L++ GV SR+ LI G V VNG + P+TK DP +D I + G P R
Sbjct: 6 ERLDKILSSQGVGSRKEAGILIRRGLVHVNGILATRPETKTDPERDQITIEGK--PLRFQ 63
Query: 261 RKVYLALNKPKG 296
R VYL +NKP G
Sbjct: 64 RHVYLMMNKPAG 75
[190][TOP]
>UniRef100_Q3SPI8 Pseudouridine synthase n=1 Tax=Nitrobacter winogradskyi Nb-255
RepID=Q3SPI8_NITWN
Length = 680
Score = 63.9 bits (154), Expect = 5e-09
Identities = 31/74 (41%), Positives = 54/74 (72%)
Frame = +3
Query: 75 AGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKR 254
AGER++K+++ +G+ASRR EE++ +G+V VNG V N+P V ++D + V+G LP+R
Sbjct: 352 AGERVAKMISRAGLASRRDAEEMVTQGRVAVNGRVINSPALDV-TSRDVVTVDGQPLPER 410
Query: 255 QPRKVYLALNKPKG 296
+ +++L +KP+G
Sbjct: 411 ERTRLFL-YHKPRG 423
[191][TOP]
>UniRef100_B2A4P2 Pseudouridine synthase n=1 Tax=Natranaerobius thermophilus
JW/NM-WN-LF RepID=B2A4P2_NATTJ
Length = 238
Score = 63.9 bits (154), Expect = 5e-09
Identities = 32/70 (45%), Positives = 47/70 (67%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
RL K ++ +G+ASRR EELI +G+VTVNG V TK++P D++ V+G + + +
Sbjct: 2 RLQKFMSRAGIASRRKSEELIQQGRVTVNGQVITRLGTKINPDTDTVKVDGEPITQEE-S 60
Query: 264 KVYLALNKPK 293
VY+ LNKPK
Sbjct: 61 NVYIMLNKPK 70
[192][TOP]
>UniRef100_C9Z1B5 Putative pseudouridine synthase n=1 Tax=Streptomyces scabiei 87.22
RepID=C9Z1B5_STRSC
Length = 313
Score = 63.9 bits (154), Expect = 5e-09
Identities = 33/76 (43%), Positives = 47/76 (61%)
Frame = +3
Query: 69 DSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP 248
+ GERL K+LA +G SRRSCEELI + +V VNG + +VDP KD + V+G +
Sbjct: 73 EQEGERLQKILARAGYGSRRSCEELIEQARVEVNGEIVLEQGKRVDPEKDEVKVDGLTVA 132
Query: 249 KRQPRKVYLALNKPKG 296
+ + + +LNKP G
Sbjct: 133 TQSYQ--FFSLNKPAG 146
[193][TOP]
>UniRef100_C8NNL7 RNA pseudouridine synthase n=2 Tax=Corynebacterium efficiens
RepID=C8NNL7_COREF
Length = 329
Score = 63.9 bits (154), Expect = 5e-09
Identities = 39/83 (46%), Positives = 49/83 (59%)
Frame = +3
Query: 48 FYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIY 227
F N N G RL KVLA +GVASRR E LI G+V VNG + T T+V+P D I
Sbjct: 80 FLNRN--SGEGIRLQKVLAQAGVASRRHAEILIDNGRVEVNGRIVTTQGTRVNPNSDVIR 137
Query: 228 VNGNRLPKRQPRKVYLALNKPKG 296
V+G R+ + + Y LNKP+G
Sbjct: 138 VDGVRININEDLE-YFVLNKPRG 159
[194][TOP]
>UniRef100_C6Y027 Pseudouridine synthase n=1 Tax=Pedobacter heparinus DSM 2366
RepID=C6Y027_PEDHD
Length = 472
Score = 63.9 bits (154), Expect = 5e-09
Identities = 33/76 (43%), Positives = 48/76 (63%)
Frame = +3
Query: 66 KDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRL 245
KD RL++ ++ SG+ SRR +ELI G V+VNG V + K+DP KD + NG L
Sbjct: 232 KDDGLIRLNRYISNSGICSRRKADELIEAGVVSVNGEVVSELGHKIDPVKDQVRYNGELL 291
Query: 246 PKRQPRKVYLALNKPK 293
++ +K+Y+ LNKPK
Sbjct: 292 --KREKKIYVLLNKPK 305
[195][TOP]
>UniRef100_C1RJR9 Pseudouridine synthase n=1 Tax=Cellulomonas flavigena DSM 20109
RepID=C1RJR9_9CELL
Length = 244
Score = 63.9 bits (154), Expect = 5e-09
Identities = 37/76 (48%), Positives = 48/76 (63%)
Frame = +3
Query: 69 DSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP 248
D G RL KVLA++G+ SRR+CEELI G+VTV G V +VDP I+++G R+
Sbjct: 3 DPEGVRLQKVLASAGLGSRRACEELIAAGRVTVAGQVVTELGVRVDPRTAVIHLDGMRV- 61
Query: 249 KRQPRKVYLALNKPKG 296
+ V LALNKP G
Sbjct: 62 QLDSSVVTLALNKPVG 77
[196][TOP]
>UniRef100_C0V6L2 Pseudouridine synthase n=1 Tax=Xylanimonas cellulosilytica DSM
15894 RepID=C0V6L2_9MICO
Length = 247
Score = 63.9 bits (154), Expect = 5e-09
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
G RL KVLA +G SRR E+LI +G+V+V+G + +VDPAK+ I+V+G RL +
Sbjct: 8 GVRLQKVLADAGYGSRRKAEQLIEDGRVSVDGQIIIELGVRVDPAKNVIHVDGLRL-QLD 66
Query: 258 PRKVYLALNKPKG 296
KV LA+NKP G
Sbjct: 67 TNKVTLAVNKPAG 79
[197][TOP]
>UniRef100_B0PFV4 Pseudouridine synthase n=1 Tax=Anaerotruncus colihominis DSM 17241
RepID=B0PFV4_9FIRM
Length = 259
Score = 63.9 bits (154), Expect = 5e-09
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
G R+ KVL+ +GV SRR EE I +G+VTVNG P VDPA+D I ++G R+ R+
Sbjct: 12 GIRIQKVLSENGVMSRRKAEEAIAQGRVTVNGHPAQ-PGNPVDPARDVIAIDGVRVQLRK 70
Query: 258 PRK-VYLALNKPKG 296
++ VY+ L+KP+G
Sbjct: 71 KKQNVYIMLHKPRG 84
[198][TOP]
>UniRef100_A9G121 Pseudouridine synthase n=1 Tax=Phaeobacter gallaeciensis BS107
RepID=A9G121_9RHOB
Length = 447
Score = 63.9 bits (154), Expect = 5e-09
Identities = 32/73 (43%), Positives = 49/73 (67%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
G+R++KVL+ +GVASRR E +I EG+V VNG V ++P V KD I V+GN + +
Sbjct: 51 GDRIAKVLSRAGVASRREAERMIAEGRVAVNGKVIDSPALNVVLGKDRIVVDGNPMQDPE 110
Query: 258 PRKVYLALNKPKG 296
P ++++ +KP G
Sbjct: 111 PPRLWM-YHKPSG 122
[199][TOP]
>UniRef100_A8RB88 Pseudouridine synthase n=1 Tax=Eubacterium dolichum DSM 3991
RepID=A8RB88_9FIRM
Length = 244
Score = 63.9 bits (154), Expect = 5e-09
Identities = 36/71 (50%), Positives = 47/71 (66%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+AA+G+ASRR CEELI +G+V+VNG + + KV D I V+G + K
Sbjct: 2 ERLQKVMAAAGIASRRKCEELIVQGRVSVNGQLVSELGYKVKKG-DQIAVDGKMIEKE-- 58
Query: 261 RKVYLALNKPK 293
KVY +NKPK
Sbjct: 59 GKVYYLMNKPK 69
[200][TOP]
>UniRef100_A6C4P7 Pseudouridine synthase n=1 Tax=Planctomyces maris DSM 8797
RepID=A6C4P7_9PLAN
Length = 352
Score = 63.9 bits (154), Expect = 5e-09
Identities = 36/71 (50%), Positives = 46/71 (64%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
RL K LAA+G+ SRR CEE I G+V+V+G V K+DP I V+G R+ + QPR
Sbjct: 24 RLQKFLAATGLGSRRHCEEYIETGRVSVDGDVITELGAKIDPETQFIEVDGERV-RLQPR 82
Query: 264 KVYLALNKPKG 296
+ YL LNKP G
Sbjct: 83 RYYL-LNKPSG 92
[201][TOP]
>UniRef100_A3X1I3 Pseudouridine synthase n=1 Tax=Nitrobacter sp. Nb-311A
RepID=A3X1I3_9BRAD
Length = 635
Score = 63.9 bits (154), Expect = 5e-09
Identities = 33/74 (44%), Positives = 53/74 (71%)
Frame = +3
Query: 75 AGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKR 254
AGER++KV++ +G+ASRR EE + +G+V VNG V N+P V ++D I V+G LP+R
Sbjct: 307 AGERVAKVISRAGLASRRDAEEWVTQGRVAVNGRVINSPALDV-TSRDVITVDGEPLPER 365
Query: 255 QPRKVYLALNKPKG 296
+ +++L +KP+G
Sbjct: 366 ERTRLFL-YHKPRG 378
[202][TOP]
>UniRef100_Q31PH9 Ribosomal large subunit pseudouridine synthase B n=2
Tax=Synechococcus elongatus RepID=Q31PH9_SYNE7
Length = 243
Score = 63.5 bits (153), Expect = 7e-09
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRL-PKRQ 257
ERL K+L+ GVASRR E+ I +G+VT+NG V Q + D +D I+++G RL PK +
Sbjct: 3 ERLQKILSQLGVASRRQAEQWIQQGRVTINGRVAEIGQ-QADLKRDRIHLDGKRLRPKHR 61
Query: 258 PRKVYLALNKPKG 296
P YL L+KP G
Sbjct: 62 PEARYLLLHKPVG 74
[203][TOP]
>UniRef100_B9KY92 Pseudouridine synthase n=1 Tax=Thermomicrobium roseum DSM 5159
RepID=B9KY92_THERP
Length = 282
Score = 63.5 bits (153), Expect = 7e-09
Identities = 37/72 (51%), Positives = 47/72 (65%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
+RL +VLAA GVASRR EELI G+VTV+G V KVDP + I V+G L +P
Sbjct: 8 QRLQRVLAAHGVASRRKAEELILAGRVTVDGVVVRELGRKVDPERQEICVDGKPL-HSEP 66
Query: 261 RKVYLALNKPKG 296
R+ Y+ L+KP G
Sbjct: 67 RR-YIVLHKPVG 77
[204][TOP]
>UniRef100_B6JIV3 Pseudouridine synthase n=1 Tax=Oligotropha carboxidovorans OM5
RepID=B6JIV3_OLICO
Length = 693
Score = 63.5 bits (153), Expect = 7e-09
Identities = 33/76 (43%), Positives = 52/76 (68%)
Frame = +3
Query: 69 DSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP 248
D +GER++KV+A +G+ SRR E+ I +G+V VNG V +P V A+D I V+G LP
Sbjct: 362 DKSGERIAKVVARAGLCSRRDAEDWIMQGRVAVNGRVIGSPALDV-TARDVITVDGQPLP 420
Query: 249 KRQPRKVYLALNKPKG 296
+R+ +++L +KP+G
Sbjct: 421 ERERTRLFL-YHKPRG 435
[205][TOP]
>UniRef100_B3E7C4 Pseudouridine synthase n=1 Tax=Geobacter lovleyi SZ
RepID=B3E7C4_GEOLS
Length = 274
Score = 63.5 bits (153), Expect = 7e-09
Identities = 33/72 (45%), Positives = 47/72 (65%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K+++A+G+ SRR+ EE+I G+VTVNG V +K DPAKD I ++G + K
Sbjct: 3 ERLQKIISAAGITSRRAAEEMILAGRVTVNGQVVTELGSKADPAKDLIALDGQPV-KPAE 61
Query: 261 RKVYLALNKPKG 296
Y+ L+KP G
Sbjct: 62 TFYYVLLHKPAG 73
[206][TOP]
>UniRef100_Q3EJ93 Ribosomal large subunit pseudouridine synthase B n=1 Tax=Bacillus
thuringiensis serovar israelensis ATCC 35646
RepID=Q3EJ93_BACTI
Length = 100
Score = 63.5 bits (153), Expect = 7e-09
Identities = 37/72 (51%), Positives = 45/72 (62%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +G+ASRR EELI +GKV VNG + TKV P +D + VN L K +P
Sbjct: 2 ERLQKVIAQAGIASRRKAEELIQQGKVKVNGKIVKELGTKVTP-QDKVEVNNIPLEKEEP 60
Query: 261 RKVYLALNKPKG 296
VY L KP G
Sbjct: 61 --VYFLLYKPTG 70
[207][TOP]
>UniRef100_C6MJU7 Pseudouridine synthase n=1 Tax=Geobacter sp. M18 RepID=C6MJU7_9DELT
Length = 262
Score = 63.5 bits (153), Expect = 7e-09
Identities = 35/72 (48%), Positives = 46/72 (63%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL K+L+ +G+ASRR E +I EG+V VNG+V TK DP D+I V+G + +
Sbjct: 3 ERLQKILSQAGIASRRESETIIAEGRVAVNGTVVTELGTKADPDTDTITVDGKPITIAEQ 62
Query: 261 RKVYLALNKPKG 296
R VYL L KP G
Sbjct: 63 R-VYLLLYKPVG 73
[208][TOP]
>UniRef100_B7IP50 Pseudouridine synthase n=7 Tax=Bacillus cereus group
RepID=B7IP50_BACC2
Length = 242
Score = 63.5 bits (153), Expect = 7e-09
Identities = 37/72 (51%), Positives = 45/72 (62%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +G+ASRR EELI +GKV VNG + TKV P +D + VN L K +P
Sbjct: 2 ERLQKVIAQAGIASRRKAEELIQQGKVKVNGKIVKELGTKVTP-QDKVEVNNIPLEKEEP 60
Query: 261 RKVYLALNKPKG 296
VY L KP G
Sbjct: 61 --VYFLLYKPTG 70
[209][TOP]
>UniRef100_C3AJK6 Pseudouridine synthase n=3 Tax=Bacillus RepID=C3AJK6_BACMY
Length = 244
Score = 63.5 bits (153), Expect = 7e-09
Identities = 37/72 (51%), Positives = 45/72 (62%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +G+ASRR EELI +GKV VNG V TKV P +D + VN L K +P
Sbjct: 4 ERLQKVIAQAGIASRRKAEELIQQGKVKVNGKVVTELGTKVTP-QDKVEVNNIPLEKEEP 62
Query: 261 RKVYLALNKPKG 296
+Y L KP G
Sbjct: 63 --IYFLLYKPTG 72
[210][TOP]
>UniRef100_C3A3M7 Pseudouridine synthase n=1 Tax=Bacillus mycoides DSM 2048
RepID=C3A3M7_BACMY
Length = 242
Score = 63.5 bits (153), Expect = 7e-09
Identities = 37/72 (51%), Positives = 45/72 (62%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +G+ASRR EELI +GKV VNG + TKV P +D + VN L K +P
Sbjct: 2 ERLQKVIAQAGIASRRKAEELIQQGKVKVNGKIVKELGTKVTP-QDKVEVNNIPLEKEEP 60
Query: 261 RKVYLALNKPKG 296
VY L KP G
Sbjct: 61 --VYFLLYKPTG 70
[211][TOP]
>UniRef100_C2XRK7 Pseudouridine synthase n=1 Tax=Bacillus cereus AH603
RepID=C2XRK7_BACCE
Length = 242
Score = 63.5 bits (153), Expect = 7e-09
Identities = 37/72 (51%), Positives = 45/72 (62%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +G+ASRR EELI +GKV VNG + TKV P +D + VN L K +P
Sbjct: 2 ERLQKVIAQAGIASRRKAEELIQQGKVKVNGKIVKELGTKVTP-QDKVEVNNIPLEKEEP 60
Query: 261 RKVYLALNKPKG 296
VY L KP G
Sbjct: 61 --VYFLLYKPTG 70
[212][TOP]
>UniRef100_C2W5Z0 Pseudouridine synthase n=1 Tax=Bacillus cereus Rock3-44
RepID=C2W5Z0_BACCE
Length = 242
Score = 63.5 bits (153), Expect = 7e-09
Identities = 37/72 (51%), Positives = 45/72 (62%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +G+ASRR EELI +GKV VNG V TKV P +D + VN L K +P
Sbjct: 2 ERLQKVIAQAGIASRRKAEELIQQGKVKVNGKVVTELGTKVTP-QDKVEVNNIPLEKEEP 60
Query: 261 RKVYLALNKPKG 296
+Y L KP G
Sbjct: 61 --IYFLLYKPTG 70
[213][TOP]
>UniRef100_C2TUX1 Pseudouridine synthase n=4 Tax=Bacillus cereus RepID=C2TUX1_BACCE
Length = 242
Score = 63.5 bits (153), Expect = 7e-09
Identities = 37/72 (51%), Positives = 45/72 (62%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +G+ASRR EELI +GKV VNG + TKV P +D + VN L K +P
Sbjct: 2 ERLQKVIAQAGIASRRKAEELIQQGKVKVNGKIVKELGTKVTP-QDKVEVNNIPLEKEEP 60
Query: 261 RKVYLALNKPKG 296
VY L KP G
Sbjct: 61 --VYFLLYKPTG 70
[214][TOP]
>UniRef100_A9VLP0 Pseudouridine synthase n=2 Tax=Bacillus cereus group
RepID=A9VLP0_BACWK
Length = 242
Score = 63.5 bits (153), Expect = 7e-09
Identities = 37/72 (51%), Positives = 45/72 (62%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +G+ASRR EELI +GKV VNG + TKV P +D + VN L K +P
Sbjct: 2 ERLQKVIAQAGIASRRKAEELIQQGKVKVNGKIVKELGTKVTP-QDKVEVNNIPLEKEEP 60
Query: 261 RKVYLALNKPKG 296
VY L KP G
Sbjct: 61 --VYFLLYKPTG 70
[215][TOP]
>UniRef100_C2Q9K8 Pseudouridine synthase n=1 Tax=Bacillus cereus R309803
RepID=C2Q9K8_BACCE
Length = 242
Score = 63.5 bits (153), Expect = 7e-09
Identities = 37/72 (51%), Positives = 45/72 (62%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +G+ASRR EELI +GKV VNG + TKV P +D + VN L K +P
Sbjct: 2 ERLQKVIAQAGIASRRKAEELIQQGKVKVNGKIVKELGTKVTP-QDKVEVNNIPLEKEEP 60
Query: 261 RKVYLALNKPKG 296
VY L KP G
Sbjct: 61 --VYFLLYKPTG 70
[216][TOP]
>UniRef100_C2PTK7 Pseudouridine synthase n=1 Tax=Bacillus cereus AH621
RepID=C2PTK7_BACCE
Length = 242
Score = 63.5 bits (153), Expect = 7e-09
Identities = 37/72 (51%), Positives = 45/72 (62%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +G+ASRR EELI +GKV VNG + TKV P +D + VN L K +P
Sbjct: 2 ERLQKVIAQAGIASRRKAEELIQQGKVKVNGKIVKELGTKVTP-QDKVEVNNIPLEKEEP 60
Query: 261 RKVYLALNKPKG 296
VY L KP G
Sbjct: 61 --VYFLLYKPTG 70
[217][TOP]
>UniRef100_C2PCJ1 Pseudouridine synthase n=2 Tax=Bacillus cereus RepID=C2PCJ1_BACCE
Length = 242
Score = 63.5 bits (153), Expect = 7e-09
Identities = 37/72 (51%), Positives = 45/72 (62%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +G+ASRR EELI +GKV VNG + TKV P +D + VN L K +P
Sbjct: 2 ERLQKVIAQAGIASRRKAEELIQQGKVKVNGKIVKELGTKVTP-QDKVEVNNIPLEKEEP 60
Query: 261 RKVYLALNKPKG 296
VY L KP G
Sbjct: 61 --VYFLLYKPTG 70
[218][TOP]
>UniRef100_C0XT67 Pseudouridine synthase n=1 Tax=Corynebacterium lipophiloflavum DSM
44291 RepID=C0XT67_9CORY
Length = 295
Score = 63.5 bits (153), Expect = 7e-09
Identities = 34/73 (46%), Positives = 47/73 (64%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
G RL KVLA +GVASRR E +I +G+V VNG+ T +VDP++D I V+G R+ +
Sbjct: 54 GVRLQKVLAQAGVASRRHAEIMITQGRVEVNGTRVTTQGMRVDPSRDVIRVDGTRINVNE 113
Query: 258 PRKVYLALNKPKG 296
+ Y NKP+G
Sbjct: 114 ELE-YFVFNKPRG 125
[219][TOP]
>UniRef100_C0W1H9 Pseudouridine synthase n=1 Tax=Actinomyces coleocanis DSM 15436
RepID=C0W1H9_9ACTO
Length = 248
Score = 63.5 bits (153), Expect = 7e-09
Identities = 32/73 (43%), Positives = 50/73 (68%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
G RL KV++ +GVASRR E+LI G+V V+G++ T +VDP+ +I+V+GN++
Sbjct: 10 GVRLQKVISQAGVASRRHAEKLIISGRVKVDGNIVRTLGIRVDPSVQTIHVDGNQI-MLD 68
Query: 258 PRKVYLALNKPKG 296
+ + +ALNKP G
Sbjct: 69 TKSLTIALNKPAG 81
[220][TOP]
>UniRef100_C0VWF7 Pseudouridine synthase n=1 Tax=Corynebacterium glucuronolyticum
ATCC 51867 RepID=C0VWF7_9CORY
Length = 349
Score = 63.5 bits (153), Expect = 7e-09
Identities = 38/73 (52%), Positives = 46/73 (63%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
G RL KVLA +GVASRR EELI +G+V VNG + +VDP I V+G R+ K
Sbjct: 108 GVRLQKVLAQAGVASRRMSEELIAQGRVEVNGEIVMRQGVRVDPDTAVIRVDGVRV-KVN 166
Query: 258 PRKVYLALNKPKG 296
VY+ALNKP G
Sbjct: 167 EDLVYIALNKPLG 179
[221][TOP]
>UniRef100_B7HKY1 Pseudouridine synthase n=9 Tax=Bacillus cereus group
RepID=B7HKY1_BACC7
Length = 242
Score = 63.5 bits (153), Expect = 7e-09
Identities = 37/72 (51%), Positives = 45/72 (62%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +G+ASRR EELI +GKV VNG + TKV P +D + VN L K +P
Sbjct: 2 ERLQKVIAQAGIASRRKAEELIQQGKVKVNGKIVKELGTKVTP-QDKVEVNNIPLEKEEP 60
Query: 261 RKVYLALNKPKG 296
VY L KP G
Sbjct: 61 --VYFLLYKPTG 70
[222][TOP]
>UniRef100_A0RBS9 Pseudouridine synthase n=29 Tax=Bacillus cereus group
RepID=A0RBS9_BACAH
Length = 242
Score = 63.5 bits (153), Expect = 7e-09
Identities = 37/72 (51%), Positives = 45/72 (62%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +G+ASRR EELI +GKV VNG + TKV P +D + VN L K +P
Sbjct: 2 ERLQKVIAQAGIASRRKAEELIQQGKVKVNGKIVKELGTKVTP-QDKVEVNNIPLEKEEP 60
Query: 261 RKVYLALNKPKG 296
VY L KP G
Sbjct: 61 --VYFLLYKPTG 70
[223][TOP]
>UniRef100_A3ZQL4 Pseudouridine synthase n=1 Tax=Blastopirellula marina DSM 3645
RepID=A3ZQL4_9PLAN
Length = 517
Score = 63.5 bits (153), Expect = 7e-09
Identities = 36/72 (50%), Positives = 44/72 (61%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KVLA +G+ SRR CE LI EG+V V+G KVDP I V+G RL +
Sbjct: 17 ERLHKVLAFAGIDSRRKCEALIQEGRVEVDGKFVTELGMKVDPEHQEILVDGQRL--KFG 74
Query: 261 RKVYLALNKPKG 296
++VY LNKP G
Sbjct: 75 KRVYYMLNKPPG 86
[224][TOP]
>UniRef100_A3I5L6 Pseudouridine synthase n=1 Tax=Bacillus sp. B14905
RepID=A3I5L6_9BACI
Length = 243
Score = 63.5 bits (153), Expect = 7e-09
Identities = 38/72 (52%), Positives = 46/72 (63%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +G+ASRR E+LI EGKV VNG V TKV + D+I V G +L K
Sbjct: 2 ERLQKVIAYAGIASRRKAEQLILEGKVKVNGKVIRELGTKVSNS-DTIEVEGVKLEKED- 59
Query: 261 RKVYLALNKPKG 296
KVY L KP+G
Sbjct: 60 -KVYFLLYKPRG 70
[225][TOP]
>UniRef100_UPI0001B4D4E5 pseudouridine synthase n=1 Tax=Streptomyces griseoflavus Tu4000
RepID=UPI0001B4D4E5
Length = 358
Score = 63.2 bits (152), Expect = 9e-09
Identities = 33/76 (43%), Positives = 47/76 (61%)
Frame = +3
Query: 69 DSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP 248
+ GERL KVLA +G SRR+CEELI + +V VNG + +VDP KD + V+G +
Sbjct: 118 EQEGERLQKVLARAGYGSRRACEELIEQARVEVNGEIVLEQGKRVDPEKDEVKVDGLTVA 177
Query: 249 KRQPRKVYLALNKPKG 296
+ + + +LNKP G
Sbjct: 178 TQSYQ--FFSLNKPAG 191
[226][TOP]
>UniRef100_UPI0001AF747E ribosomal large subunit pseudouridine synthase B n=1
Tax=Mycobacterium kansasii ATCC 12478
RepID=UPI0001AF747E
Length = 250
Score = 63.2 bits (152), Expect = 9e-09
Identities = 35/75 (46%), Positives = 50/75 (66%)
Frame = +3
Query: 72 SAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPK 251
S G RL KVL+ +G+ASRR+ E++I +G+V V+G + T+VDP I V+G R+
Sbjct: 7 SPGIRLQKVLSQAGIASRRAAEKMIIDGRVEVDGKLVTELGTRVDPDVSVIRVDGARVVL 66
Query: 252 RQPRKVYLALNKPKG 296
+ VYLALNKP+G
Sbjct: 67 DE-SLVYLALNKPRG 80
[227][TOP]
>UniRef100_UPI0001AF1F89 pseudouridine synthase n=1 Tax=Streptomyces ghanaensis ATCC 14672
RepID=UPI0001AF1F89
Length = 347
Score = 63.2 bits (152), Expect = 9e-09
Identities = 33/76 (43%), Positives = 47/76 (61%)
Frame = +3
Query: 69 DSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLP 248
+ GERL KVLA +G SRR+CEELI + +V VNG + +VDP KD + V+G +
Sbjct: 107 EQEGERLQKVLARAGYGSRRACEELIEQARVEVNGEIVLEQGRRVDPEKDEVKVDGLTVA 166
Query: 249 KRQPRKVYLALNKPKG 296
+ + + +LNKP G
Sbjct: 167 TQSYQ--FFSLNKPAG 180
[228][TOP]
>UniRef100_UPI00019765E8 pseudouridine synthase n=1 Tax=Bacillus subtilis subsp. subtilis
str. NCIB 3610 RepID=UPI00019765E8
Length = 229
Score = 63.2 bits (152), Expect = 9e-09
Identities = 38/72 (52%), Positives = 45/72 (62%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +GVASRR EELI EGKV VNG V KV D I VNG ++ + +P
Sbjct: 2 ERLQKVIAHAGVASRRKAEELIKEGKVKVNGKVVTELGVKV-TGSDQIEVNGLKVEREEP 60
Query: 261 RKVYLALNKPKG 296
VY L KP+G
Sbjct: 61 --VYFLLYKPRG 70
[229][TOP]
>UniRef100_UPI00019762A4 pseudouridine synthase n=1 Tax=Bacillus subtilis subsp. subtilis
str. 168 RepID=UPI00019762A4
Length = 245
Score = 63.2 bits (152), Expect = 9e-09
Identities = 38/72 (52%), Positives = 45/72 (62%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +GVASRR EELI EGKV VNG V KV D I VNG ++ + +P
Sbjct: 18 ERLQKVIAHAGVASRRKAEELIKEGKVKVNGKVVTELGVKV-TGSDQIEVNGLKVEREEP 76
Query: 261 RKVYLALNKPKG 296
VY L KP+G
Sbjct: 77 --VYFLLYKPRG 86
[230][TOP]
>UniRef100_UPI000185BFEB ribosomal large subunit pseudouridine synthase B n=1
Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BFEB
Length = 324
Score = 63.2 bits (152), Expect = 9e-09
Identities = 41/102 (40%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Frame = +3
Query: 3 VSSSPPPKYSK--AARRFYNENFKDSAGE--RLSKVLAASGVASRRSCEELIFEGKVTVN 170
VS++ P ++ + RR + AGE RL KVLA +GVASRR E+LI EG+V V+
Sbjct: 54 VSNARPARHQHVDSDRRGSGKRAHSEAGEGVRLQKVLAQAGVASRRMAEKLIDEGRVEVD 113
Query: 171 GSVCNTPQTKVDPAKDSIYVNGNRLPKRQPRKVYLALNKPKG 296
G + +VDP I V+G+R+ + + Y LNKP+G
Sbjct: 114 GKIVTRQGVRVDPNTSVIRVDGSRVIVNEDMQ-YFVLNKPRG 154
[231][TOP]
>UniRef100_Q8YQF8 Pseudouridine synthase n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8YQF8_ANASP
Length = 262
Score = 63.2 bits (152), Expect = 9e-09
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRL-PKRQP 260
RL KVLA G+ASRR EE+I +V +NG++ Q KV+P KD I V+G + +R P
Sbjct: 4 RLQKVLAQWGIASRREAEEMIRRSRVQINGTLAELGQ-KVNPEKDIITVDGKSVSAQRHP 62
Query: 261 RKVYLALNKPKG 296
R YL LNKP G
Sbjct: 63 RLTYLLLNKPTG 74
[232][TOP]
>UniRef100_Q6AGF9 Pseudouridine synthase n=1 Tax=Leifsonia xyli subsp. xyli
RepID=Q6AGF9_LEIXX
Length = 260
Score = 63.2 bits (152), Expect = 9e-09
Identities = 36/73 (49%), Positives = 47/73 (64%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
GERL KV+AA+GVASRR EELI G+V+VNG+V +VDP D + V+G +
Sbjct: 7 GERLQKVMAAAGVASRRVSEELIAAGRVSVNGTVVTELGRRVDPVVDHVAVDGAAVQLDT 66
Query: 258 PRKVYLALNKPKG 296
+ Y+ LNKP G
Sbjct: 67 TLR-YVMLNKPVG 78
[233][TOP]
>UniRef100_Q63DQ9 Pseudouridine synthase n=1 Tax=Bacillus cereus E33L
RepID=Q63DQ9_BACCZ
Length = 242
Score = 63.2 bits (152), Expect = 9e-09
Identities = 37/72 (51%), Positives = 45/72 (62%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +G+ASRR EELI +GKV VNG + TKV P +D + VN L K +P
Sbjct: 2 ERLQKVIAQAGIASRRKAEELIQQGKVKVNGKIVKELGTKVAP-QDKVEVNNIPLEKEEP 60
Query: 261 RKVYLALNKPKG 296
VY L KP G
Sbjct: 61 --VYFLLYKPTG 70
[234][TOP]
>UniRef100_Q2JD11 Pseudouridine synthase n=1 Tax=Frankia sp. CcI3 RepID=Q2JD11_FRASC
Length = 252
Score = 63.2 bits (152), Expect = 9e-09
Identities = 38/73 (52%), Positives = 47/73 (64%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
G RL KVLAA+GV SRR EELI G+V V+G+V +VDP I V+G R+ R
Sbjct: 14 GIRLQKVLAAAGVGSRRHGEELIAAGRVRVDGTVVREQGRRVDPETALIEVDGERIVTR- 72
Query: 258 PRKVYLALNKPKG 296
V+LALNKP+G
Sbjct: 73 TGLVHLALNKPRG 85
[235][TOP]
>UniRef100_Q03F83 Pseudouridine synthase n=1 Tax=Pediococcus pentosaceus ATCC 25745
RepID=Q03F83_PEDPA
Length = 241
Score = 63.2 bits (152), Expect = 9e-09
Identities = 38/72 (52%), Positives = 47/72 (65%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +GVASRR E+LI EG V VNG V TKV A D I V+G +P ++
Sbjct: 4 ERLQKVMAEAGVASRRKSEKLITEGHVRVNGKVIKQLGTKV-TAHDKIEVDG--VPLQRE 60
Query: 261 RKVYLALNKPKG 296
+ VY LNKP+G
Sbjct: 61 KMVYFLLNKPRG 72
[236][TOP]
>UniRef100_C1A029 Pseudouridine synthase n=1 Tax=Rhodococcus erythropolis PR4
RepID=C1A029_RHOE4
Length = 267
Score = 63.2 bits (152), Expect = 9e-09
Identities = 41/98 (41%), Positives = 59/98 (60%)
Frame = +3
Query: 3 VSSSPPPKYSKAARRFYNENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVC 182
VS++ P ++ A ++ K G RL KVLA +GVASRR+ EELI +G+V V+G +
Sbjct: 2 VSNAKPARHQHAEITKHDGPPKGD-GVRLQKVLAQAGVASRRAAEELIDQGRVEVDGRIV 60
Query: 183 NTPQTKVDPAKDSIYVNGNRLPKRQPRKVYLALNKPKG 296
+VDP + V+G R+ Q VYLA+NKP+G
Sbjct: 61 VEQGLRVDPENAVVRVDGVRVVV-QKDLVYLAMNKPRG 97
[237][TOP]
>UniRef100_B8HSY9 Pseudouridine synthase n=1 Tax=Cyanothece sp. PCC 7425
RepID=B8HSY9_CYAP4
Length = 261
Score = 63.2 bits (152), Expect = 9e-09
Identities = 34/74 (45%), Positives = 45/74 (60%)
Frame = +3
Query: 75 AGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKR 254
+GERL K+LA G+ASRR E++I +G+V +NG Q K DP D I V+G L
Sbjct: 3 SGERLQKILAQWGIASRRQAEQMILDGRVWLNGEPATLGQ-KADPHCDRIQVDGRTLQSD 61
Query: 255 QPRKVYLALNKPKG 296
+P +YL L KP G
Sbjct: 62 RPDLLYLLLYKPTG 75
[238][TOP]
>UniRef100_B7GKJ8 Pseudouridine synthase n=1 Tax=Anoxybacillus flavithermus WK1
RepID=B7GKJ8_ANOFW
Length = 255
Score = 63.2 bits (152), Expect = 9e-09
Identities = 38/72 (52%), Positives = 46/72 (63%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +GVASRR E+LI EGKV VNG V KV P +D I V+G L + +P
Sbjct: 12 ERLQKVIAHAGVASRRKAEQLIVEGKVKVNGKVVTELGVKVSP-QDRIEVDGIPLEREEP 70
Query: 261 RKVYLALNKPKG 296
VY L KP+G
Sbjct: 71 --VYYLLYKPRG 80
[239][TOP]
>UniRef100_A8ZRV1 Pseudouridine synthase n=1 Tax=Desulfococcus oleovorans Hxd3
RepID=A8ZRV1_DESOH
Length = 241
Score = 63.2 bits (152), Expect = 9e-09
Identities = 34/71 (47%), Positives = 43/71 (60%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQPR 263
RL K L+ +GV SRR E I EG+V VNG V TKVDP D + +G+R+ +
Sbjct: 11 RLQKFLSGAGVCSRRRAEVYIAEGRVAVNGQVVTELGTKVDPESDDVMFDGHRVTLAESH 70
Query: 264 KVYLALNKPKG 296
VY+ALNKP G
Sbjct: 71 -VYIALNKPPG 80
[240][TOP]
>UniRef100_A7Z665 Pseudouridine synthase n=1 Tax=Bacillus amyloliquefaciens FZB42
RepID=A7Z665_BACA2
Length = 244
Score = 63.2 bits (152), Expect = 9e-09
Identities = 38/72 (52%), Positives = 45/72 (62%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +GVASRR EELI EGKV VNG V KV D I VNG ++ + +P
Sbjct: 2 ERLQKVIAHAGVASRRKAEELIKEGKVKVNGKVITELGVKV-TGSDQIEVNGLKVEREEP 60
Query: 261 RKVYLALNKPKG 296
VY L KP+G
Sbjct: 61 --VYFLLYKPRG 70
[241][TOP]
>UniRef100_Q7X2Z6 Pseudouridine synthase n=1 Tax=uncultured Acidobacteria bacterium
RepID=Q7X2Z6_9BACT
Length = 317
Score = 63.2 bits (152), Expect = 9e-09
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRL--PKR 254
ERL K++A +G+ASRR E+LI G+VTVNG V TK D D I V G + +
Sbjct: 57 ERLQKIIATAGIASRRHAEQLITAGEVTVNGKVVTELGTKADAQNDHIKVRGKLINPTLK 116
Query: 255 QPRKVYLALNKPKG 296
+ K Y+ LNKP+G
Sbjct: 117 RVEKNYILLNKPRG 130
[242][TOP]
>UniRef100_C2BPU0 Pseudouridine synthase n=1 Tax=Corynebacterium pseudogenitalium
ATCC 33035 RepID=C2BPU0_9CORY
Length = 303
Score = 63.2 bits (152), Expect = 9e-09
Identities = 36/73 (49%), Positives = 46/73 (63%)
Frame = +3
Query: 78 GERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQ 257
GERL KVLA +GVASRR E LI G+V VNG + KV+P+ D I V+G R+ +
Sbjct: 62 GERLQKVLAKAGVASRRHAEILIDAGRVEVNGKIIAKQGVKVNPSVDVIRVDGVRVNVNE 121
Query: 258 PRKVYLALNKPKG 296
+ Y LNKP+G
Sbjct: 122 EHE-YFVLNKPRG 133
[243][TOP]
>UniRef100_C1ZE67 Pseudouridine synthase n=1 Tax=Planctomyces limnophilus DSM 3776
RepID=C1ZE67_PLALI
Length = 554
Score = 63.2 bits (152), Expect = 9e-09
Identities = 34/75 (45%), Positives = 47/75 (62%)
Frame = +3
Query: 72 SAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPK 251
SAGERL KVLA++G SRR+CEE I G+VT++G V +VD ++ + V+G +L
Sbjct: 34 SAGERLQKVLASAGYGSRRACEEYIEMGRVTIDGVVAKELGVRVDLSRQKVAVDGEKL-- 91
Query: 252 RQPRKVYLALNKPKG 296
R K Y +KP G
Sbjct: 92 RVEEKRYFLFHKPAG 106
[244][TOP]
>UniRef100_C0WYU9 Pseudouridine synthase n=1 Tax=Lactobacillus fermentum ATCC 14931
RepID=C0WYU9_LACFE
Length = 241
Score = 63.2 bits (152), Expect = 9e-09
Identities = 38/74 (51%), Positives = 45/74 (60%)
Frame = +3
Query: 75 AGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKR 254
A ERL KV+A +GVASRR+ E LI GKV VNG V TKVD D + VNG P
Sbjct: 2 AKERLQKVIAHAGVASRRAAEGLILAGKVKVNGQVVTELGTKVD-GNDEVMVNGE--PVE 58
Query: 255 QPRKVYLALNKPKG 296
Q + Y L+KP+G
Sbjct: 59 QEQHEYYLLDKPRG 72
[245][TOP]
>UniRef100_B5VZE6 Pseudouridine synthase n=1 Tax=Arthrospira maxima CS-328
RepID=B5VZE6_SPIMA
Length = 257
Score = 63.2 bits (152), Expect = 9e-09
Identities = 36/73 (49%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRL-PKRQ 257
ERL K+++ GVASRR EE+I G+V VNG Q K DP D I ++G L P Q
Sbjct: 3 ERLQKIISHWGVASRRHAEEMILSGRVKVNGDRAYLGQ-KADPKCDRIEIDGRALHPSSQ 61
Query: 258 PRKVYLALNKPKG 296
P+ +YL LNKP G
Sbjct: 62 PQPLYLLLNKPLG 74
[246][TOP]
>UniRef100_A6DJV5 Pseudouridine synthase n=1 Tax=Lentisphaera araneosa HTCC2155
RepID=A6DJV5_9BACT
Length = 297
Score = 63.2 bits (152), Expect = 9e-09
Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +3
Query: 84 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRL-PKRQP 260
RL+K ++ SG SRR + LI EG+V +NG C T Q D KD + V+G R+ KRQ
Sbjct: 2 RLNKFISDSGFCSRREADRLIEEGRVLINGRRCKTGQQVED--KDFVEVDGQRIKAKRQK 59
Query: 261 RKVYLALNKPKG 296
+VYLA NKP+G
Sbjct: 60 ERVYLAFNKPEG 71
[247][TOP]
>UniRef100_A3UFV9 Pseudouridine synthase n=1 Tax=Oceanicaulis alexandrii HTCC2633
RepID=A3UFV9_9RHOB
Length = 354
Score = 63.2 bits (152), Expect = 9e-09
Identities = 34/77 (44%), Positives = 51/77 (66%)
Frame = +3
Query: 66 KDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRL 245
++ GER++KVLA +G+ASRR E LI +G+V+VNG + TP KV A D + V+G +
Sbjct: 12 EEEGGERIAKVLAHAGIASRREAERLIEKGRVSVNGEILRTPAFKV-MAGDDVRVDGESI 70
Query: 246 PKRQPRKVYLALNKPKG 296
+R P +V+ +KP G
Sbjct: 71 GQRPPTRVW-RYHKPVG 86
[248][TOP]
>UniRef100_Q55578 Uncharacterized RNA pseudouridine synthase slr0361 n=1
Tax=Synechocystis sp. PCC 6803 RepID=Y361_SYNY3
Length = 249
Score = 63.2 bits (152), Expect = 9e-09
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRL-PKRQ 257
ER+ K+L+ G+ASRR EE+I G+V+VNG V N K DP +D + V+G ++ +
Sbjct: 3 ERIQKLLSQWGIASRRHAEEMILAGRVSVNGKVANLGD-KADPQQDFLSVDGKQIKADNR 61
Query: 258 PRKVYLALNKPK 293
PR +YL +NKP+
Sbjct: 62 PRDIYLLVNKPR 73
[249][TOP]
>UniRef100_P65842 Uncharacterized RNA pseudouridine synthase Rv1711/MT1751.1 n=9
Tax=Mycobacterium tuberculosis complex RepID=Y1711_MYCTU
Length = 254
Score = 63.2 bits (152), Expect = 9e-09
Identities = 35/80 (43%), Positives = 51/80 (63%)
Frame = +3
Query: 57 ENFKDSAGERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNG 236
E ++ G RL KVL+ +G+ASRR+ E++I +G+V V+G V T+VDP + V+G
Sbjct: 6 EESREPRGIRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQVAVVRVDG 65
Query: 237 NRLPKRQPRKVYLALNKPKG 296
R+ VYLALNKP+G
Sbjct: 66 ARV-VLDDSLVYLALNKPRG 84
[250][TOP]
>UniRef100_P35159 Ribosomal large subunit pseudouridine synthase B n=1 Tax=Bacillus
subtilis RepID=RLUB_BACSU
Length = 244
Score = 63.2 bits (152), Expect = 9e-09
Identities = 38/72 (52%), Positives = 45/72 (62%)
Frame = +3
Query: 81 ERLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTKVDPAKDSIYVNGNRLPKRQP 260
ERL KV+A +GVASRR EELI EGKV VNG V KV D I VNG ++ + +P
Sbjct: 2 ERLQKVIAHAGVASRRKAEELIKEGKVKVNGKVVTELGVKV-TGSDQIEVNGLKVEREEP 60
Query: 261 RKVYLALNKPKG 296
VY L KP+G
Sbjct: 61 --VYFLLYKPRG 70