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[1][TOP]
>UniRef100_A9PA38 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Populus
trichocarpa RepID=A9PA38_POPTR
Length = 297
Score = 99.0 bits (245), Expect = 1e-19
Identities = 73/137 (53%), Positives = 82/137 (59%), Gaps = 8/137 (5%)
Frame = +2
Query: 20 MDLLTTSPSH---LSSSLPFSPSRIRTLFSKPPTSSF----NP-KPSSPSPCHRTTPLKC 175
MDLL+ S S L SSL + S L KPP S F P PSSP T LK
Sbjct: 1 MDLLSLSSSTATPLFSSLKPTLSPHHNL--KPPASPFPFLFKPLTPSSPKLSPLKTSLKS 58
Query: 176 ILTASPNHSKNANFEPESLKPRITFQMSSPQTPATAIRGAETDAMGLLLRERIVFLGSGI 355
LT +P Q++SPQTPAT++RGAETDAMGLLLRERIVFLG+ I
Sbjct: 59 SLTLTPIP-----------------QLASPQTPATSMRGAETDAMGLLLRERIVFLGNNI 101
Query: 356 DDFVADAIMSQLLLLDA 406
DDFVADAI+SQLLLLDA
Sbjct: 102 DDFVADAIISQLLLLDA 118
[2][TOP]
>UniRef100_B9S1L6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ricinus
communis RepID=B9S1L6_RICCO
Length = 294
Score = 97.4 bits (241), Expect = 4e-19
Identities = 63/128 (49%), Positives = 78/128 (60%), Gaps = 1/128 (0%)
Frame = +2
Query: 26 LLTTSPSHLSSSLPFSPSRIR-TLFSKPPTSSFNPKPSSPSPCHRTTPLKCILTASPNHS 202
LL +SP SS P S ++ T +KP SFN K SP ++ P I ++
Sbjct: 4 LLLSSPLTPHSSSPSPSSSLKPTTAAKPSLVSFNFKSPISSPHNKNFPSFSIQSSGT--- 60
Query: 203 KNANFEPESLKPRITFQMSSPQTPATAIRGAETDAMGLLLRERIVFLGSGIDDFVADAIM 382
+T Q ++PQTPATA+RGAE+DAMGLLLRERIVFLG+ IDDFVADA +
Sbjct: 61 -------------LTPQFTAPQTPATAMRGAESDAMGLLLRERIVFLGNNIDDFVADATI 107
Query: 383 SQLLLLDA 406
SQLLLLDA
Sbjct: 108 SQLLLLDA 115
[3][TOP]
>UniRef100_Q94B60 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic n=1
Tax=Arabidopsis thaliana RepID=CLPP4_ARATH
Length = 292
Score = 88.2 bits (217), Expect = 3e-16
Identities = 60/122 (49%), Positives = 66/122 (54%)
Frame = +2
Query: 41 PSHLSSSLPFSPSRIRTLFSKPPTSSFNPKPSSPSPCHRTTPLKCILTASPNHSKNANFE 220
PS +SS L S S + F KP P P T+P SP NA+ E
Sbjct: 12 PSLVSSRLNSSSSASSSSFPKPNNLYLKPTKLISPPLRTTSP-------SPLRFANASIE 64
Query: 221 PESLKPRITFQMSSPQTPATAIRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLL 400
QT +AIRGAE+D MGLLLRERIVFLGS IDDFVADAIMSQLLLL
Sbjct: 65 MS-------------QTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLL 111
Query: 401 DA 406
DA
Sbjct: 112 DA 113
[4][TOP]
>UniRef100_A7PJQ1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Vitis
vinifera RepID=A7PJQ1_VITVI
Length = 291
Score = 78.6 bits (192), Expect = 2e-13
Identities = 51/101 (50%), Positives = 67/101 (66%), Gaps = 2/101 (1%)
Frame = +2
Query: 110 TSSFNPKPSSPSPCHRTTPLKCILTASPNHSKNAN-FEPESLKPRITFQMS-SPQTPATA 283
T+SF PKPSS S L+ +++AS + S + ++L + ++ QTP
Sbjct: 20 TTSF-PKPSSFS-------LRPLISASLSSSPSLKALNTKTLDSVLALPLAHGSQTPGMG 71
Query: 284 IRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDA 406
RGAE DAMGLLL+ERIVFLG+ +DDFVADAI+SQLLLLDA
Sbjct: 72 ARGAEADAMGLLLKERIVFLGNNVDDFVADAIISQLLLLDA 112
[5][TOP]
>UniRef100_B9GZW8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Populus
trichocarpa RepID=B9GZW8_POPTR
Length = 220
Score = 73.6 bits (179), Expect = 7e-12
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +2
Query: 284 IRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDA 406
+RGAETDAMGLLLRERIVFLG+ IDDFVADAI+SQLLLLDA
Sbjct: 1 MRGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDA 41
[6][TOP]
>UniRef100_A9NTR6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea
sitchensis RepID=A9NTR6_PICSI
Length = 317
Score = 73.2 bits (178), Expect = 9e-12
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +2
Query: 266 QTPATAIRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDA 406
QTPA+A R A+ D MGLLLR+RIVFLGS +DDFVADAI+SQLLLLDA
Sbjct: 92 QTPASAQRSADGDVMGLLLRQRIVFLGSNMDDFVADAIISQLLLLDA 138
[7][TOP]
>UniRef100_A9TZR6 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9TZR6_PHYPA
Length = 230
Score = 65.5 bits (158), Expect = 2e-09
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = +2
Query: 266 QTPATAIRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDA 406
QT + +R AE D MGL+L++RIVFLG +DDFVADAI+SQLLLLDA
Sbjct: 2 QTASPGMRSAEADVMGLMLKQRIVFLGHQMDDFVADAIVSQLLLLDA 48
[8][TOP]
>UniRef100_C1FDP6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Micromonas
sp. RCC299 RepID=C1FDP6_9CHLO
Length = 270
Score = 64.3 bits (155), Expect = 4e-09
Identities = 37/90 (41%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +2
Query: 140 PSPCHRTTPLKCILTASPNHSKNANFEPESLKPRITFQMSSPQTPATAI-RGAETDAMGL 316
P R P +P + F + + R++ MS P + R D GL
Sbjct: 10 PHTTPRLLPASRSRKLTPKRFDSVTFHDRTSERRLSVAMSRPHAGGPVVPRQDAADPFGL 69
Query: 317 LLRERIVFLGSGIDDFVADAIMSQLLLLDA 406
LLRERIVFLG+ +DDF ADA++SQLLLLDA
Sbjct: 70 LLRERIVFLGNQVDDFTADAVISQLLLLDA 99
[9][TOP]
>UniRef100_A9YYI2 Clp protease 4 proteolytic subunit (Fragment) n=1 Tax=Capsicum
annuum RepID=A9YYI2_CAPAN
Length = 83
Score = 62.4 bits (150), Expect = 2e-08
Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +2
Query: 137 SPSPCHRTT-PLKCILTASPNHSKNANFEPESLKPRITFQMSSPQTPATAIRGAETDAMG 313
SP P +T+ LK LT+ SK + + SL S+PQTP TA+ GA DAMG
Sbjct: 9 SPYPSRKTSLSLKSSLTSHQPTSKTLSDDKFSL-----LLASAPQTPGTAMAGAGADAMG 63
Query: 314 LLLRERIVFLGSGIDDF 364
LL RERIVFLG+ IDDF
Sbjct: 64 LLFRERIVFLGNNIDDF 80
[10][TOP]
>UniRef100_A9RE44 ATP-dependent Clp protease proteolytic subunit n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9RE44_PHYPA
Length = 232
Score = 61.6 bits (148), Expect = 3e-08
Identities = 30/47 (63%), Positives = 39/47 (82%)
Frame = +2
Query: 266 QTPATAIRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDA 406
Q A++ AE D MGL+L++RIVFLG+ +DDFVAD+I+SQLLLLDA
Sbjct: 4 QAAPQAMQSAEGDVMGLMLKQRIVFLGNQMDDFVADSIISQLLLLDA 50
[11][TOP]
>UniRef100_Q7XBR2 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Oryza sativa
RepID=Q7XBR2_ORYSJ
Length = 293
Score = 60.5 bits (145), Expect = 6e-08
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = +2
Query: 290 GAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDA 406
GA D MGLLLRERIVFLG+ I+DF+ADA++SQLLLLDA
Sbjct: 76 GAGGDVMGLLLRERIVFLGNEIEDFLADAVVSQLLLLDA 114
[12][TOP]
>UniRef100_B4FP39 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Zea mays
RepID=B4FP39_MAIZE
Length = 289
Score = 59.7 bits (143), Expect = 1e-07
Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 4/64 (6%)
Frame = +2
Query: 227 SLKPRITFQMSSP----QTPATAIRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLL 394
SLKP + +P ++ A D MGLLLRERIVFLG+ I+DF+ADA++SQLL
Sbjct: 47 SLKPCASLAPQAPLWRAESDAAGGGAGAGDVMGLLLRERIVFLGNEIEDFLADAVVSQLL 106
Query: 395 LLDA 406
LLDA
Sbjct: 107 LLDA 110
[13][TOP]
>UniRef100_C5WQL6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sorghum
bicolor RepID=C5WQL6_SORBI
Length = 289
Score = 59.3 bits (142), Expect = 1e-07
Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 4/64 (6%)
Frame = +2
Query: 227 SLKPRITFQMSSP----QTPATAIRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLL 394
SLKP + +P ++ A D MGLLLRERIVFLG+ I+DF+ADA++SQLL
Sbjct: 47 SLKPCASLAPHAPLWRAESDAAGGGAGAGDVMGLLLRERIVFLGNEIEDFLADAVVSQLL 106
Query: 395 LLDA 406
LLDA
Sbjct: 107 LLDA 110
[14][TOP]
>UniRef100_C6TCK2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Glycine max
RepID=C6TCK2_SOYBN
Length = 322
Score = 58.5 bits (140), Expect = 2e-07
Identities = 37/94 (39%), Positives = 48/94 (51%)
Frame = +2
Query: 125 PKPSSPSPCHRTTPLKCILTASPNHSKNANFEPESLKPRITFQMSSPQTPATAIRGAETD 304
P P++ + RT PL + + S N P +SP P R E D
Sbjct: 29 PIPTASTKTRRTKPLSIVNASRQTLSSNWLVSPHDFSA----STASPWLP----RFEELD 80
Query: 305 AMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDA 406
A +LLR+RI+FLGS +DD AD I+SQLL LDA
Sbjct: 81 ATNMLLRQRIIFLGSQVDDMTADFIISQLLFLDA 114
[15][TOP]
>UniRef100_C1MLC8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Micromonas
pusilla CCMP1545 RepID=C1MLC8_9CHLO
Length = 283
Score = 57.4 bits (137), Expect = 5e-07
Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
Frame = +2
Query: 86 RTLFSKPPTSSFNPKPSSPSPCHRTTPLKCILTASPNHSK------NANFEPES------ 229
+TL S+ S+NP + R + LK L ++ +K +++F PE+
Sbjct: 3 QTLLSQRVPFSWNPAGT------RQSRLKSELASNSTRAKFSFRKVHSSFIPEAGISGGD 56
Query: 230 LKPRITFQMSSPQTPATAIRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDA 406
L P + + P R D GLLLR+RIVFLG+ +DDF ADA++SQLLLLDA
Sbjct: 57 LHPAYSVRAGGLVVP----RQEAGDPFGLLLRQRIVFLGNQVDDFTADAVISQLLLLDA 111
[16][TOP]
>UniRef100_B9T322 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ricinus
communis RepID=B9T322_RICCO
Length = 334
Score = 55.5 bits (132), Expect = 2e-06
Identities = 41/118 (34%), Positives = 59/118 (50%)
Frame = +2
Query: 53 SSSLPFSPSRIRTLFSKPPTSSFNPKPSSPSPCHRTTPLKCILTASPNHSKNANFEPESL 232
SS L FS + L + T S K S + R P+ + + ++N++ +
Sbjct: 15 SSPLCFSNHKQFLLPTINTTDSNKAKVSISTNGKRRKPISVKAVNTRKETLSSNWDVANF 74
Query: 233 KPRITFQMSSPQTPATAIRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDA 406
+F SSP P R E D +LLR+RI+FLGS +DD AD ++SQLL LDA
Sbjct: 75 SS--SFATSSPALP----RFEELDTTNMLLRQRIIFLGSQVDDMTADFVISQLLFLDA 126
[17][TOP]
>UniRef100_A7PR54 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Vitis
vinifera RepID=A7PR54_VITVI
Length = 320
Score = 55.5 bits (132), Expect = 2e-06
Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Frame = +2
Query: 53 SSSLPFSPSRIRTL-FSKPPTSSFNPKPSSPSPCHRTTPLKCILTASPNHSKNA-NFEPE 226
S +L ++ S R L F++ P+SS PS+ + + + +S + A N++
Sbjct: 4 SLTLTYAASASRPLCFNRSPSSSSLWLPSTSRSSRKGRAVSMVKASSASRPTLASNWDLS 63
Query: 227 SLKPRITFQMSSPQTPATAIRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDA 406
SL+ S P R + D +LLR+RIVFLGS +DD AD ++SQLL LDA
Sbjct: 64 SLQ--------SASAPTWLPRFEDLDTTNMLLRQRIVFLGSQVDDMTADLVISQLLFLDA 115
[18][TOP]
>UniRef100_Q0JMF9 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Oryza sativa
RepID=Q0JMF9_ORYSJ
Length = 314
Score = 55.1 bits (131), Expect = 2e-06
Identities = 38/99 (38%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Frame = +2
Query: 122 NPKPSSPSPCHR-TTPLKCILTASPNHSKNANFEPESLKPRITFQMSSPQTPATAIRGA- 295
+P SS SP P C A+P + A+ +++ P A R
Sbjct: 13 SPCSSSSSPSSLFLAPNPCCWKAAPRATVRASASAARRTLSSAWELPGPSAARPAARKPR 72
Query: 296 --ETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDA 406
E D +LLR+RIVFLGS +DD AD I+SQLLLLDA
Sbjct: 73 LEELDTTNMLLRQRIVFLGSPVDDMSADLIISQLLLLDA 111
[19][TOP]
>UniRef100_C6TIX8 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1
Tax=Glycine max RepID=C6TIX8_SOYBN
Length = 270
Score = 55.1 bits (131), Expect = 2e-06
Identities = 36/94 (38%), Positives = 47/94 (50%)
Frame = +2
Query: 125 PKPSSPSPCHRTTPLKCILTASPNHSKNANFEPESLKPRITFQMSSPQTPATAIRGAETD 304
P ++ + RT PL + + S N P +SP P R E D
Sbjct: 29 PIHTASTKTRRTKPLSVVNASRQTLSSNWLVSPHDFSA----STASPWLP----RFEELD 80
Query: 305 AMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDA 406
A +LLR+RI+FLGS +DD AD I+SQLL LDA
Sbjct: 81 ATNMLLRQRIIFLGSQVDDMTADFIISQLLFLDA 114
[20][TOP]
>UniRef100_Q9SXJ6 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic n=1
Tax=Arabidopsis thaliana RepID=CLPP3_ARATH
Length = 309
Score = 55.1 bits (131), Expect = 2e-06
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Frame = +2
Query: 125 PKPSSPSPCHRTTPLKCILTASPNHSKNANFEPESLKPRITFQMSS-PQTPATAIRGAET 301
PK S P C R++ L+ P + ++N++ S F + S Q+P+ E
Sbjct: 35 PKTSKPF-CVRSS---MSLSKPPRQTLSSNWDVSS------FSIDSVAQSPSRLPSFEEL 84
Query: 302 DAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDA 406
D +LLR+RIVFLGS +DD AD ++SQLLLLDA
Sbjct: 85 DTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDA 119
[21][TOP]
>UniRef100_A8IJ60 ATP-dependent Clp protease proteolytic subunit n=1
Tax=Chlamydomonas reinhardtii RepID=A8IJ60_CHLRE
Length = 345
Score = 53.5 bits (127), Expect = 7e-06
Identities = 30/47 (63%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Frame = +2
Query: 272 PATAIRGAET--DAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDA 406
P A R AE D GLLLR+RIVFLG ++DF ADAI+SQLLLLD+
Sbjct: 53 PIVAPRTAEMQGDPFGLLLRQRIVFLGGEVEDFGADAIISQLLLLDS 99
[22][TOP]
>UniRef100_C5XLB5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sorghum
bicolor RepID=C5XLB5_SORBI
Length = 313
Score = 53.1 bits (126), Expect = 9e-06
Identities = 39/109 (35%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Frame = +2
Query: 104 PPTSSFNPKPSSPSPC----HRTTPLKCILTASP----NHSKNANFEPESLKPRITFQMS 259
P +SF+P +PC T P + S + + +A + P L +
Sbjct: 10 PACTSFSPSSVFLTPCSSDGRSTAPRAAAVRGSAVTWAHRTLSARWVPSGL--------A 61
Query: 260 SPQTPATAIRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDA 406
+ A R E D +LLR+RIVFLGS +DD AD I+SQLLLLDA
Sbjct: 62 VARPAARKARLEELDTSNMLLRQRIVFLGSSVDDTSADLIISQLLLLDA 110